Query 044068
Match_columns 481
No_of_seqs 249 out of 1548
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 11:10:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044068.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044068hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 1E-117 2E-122 916.8 40.5 412 65-479 24-453 (454)
2 PLN02209 serine carboxypeptida 100.0 2E-101 4E-106 803.8 41.3 400 66-476 20-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 2E-101 4E-106 803.4 40.5 395 69-476 21-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 3E-101 7E-106 804.8 33.3 395 75-473 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 2.6E-95 6E-100 766.0 39.3 380 79-476 41-461 (462)
6 PLN02213 sinapoylglucose-malat 100.0 3.9E-74 8.5E-79 580.4 30.8 307 158-476 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 1.5E-67 3.2E-72 538.2 22.2 376 81-475 72-492 (498)
8 KOG1283 Serine carboxypeptidas 100.0 4.7E-66 1E-70 494.2 16.2 376 86-472 4-412 (414)
9 TIGR03611 RutD pyrimidine util 99.5 4.4E-12 9.5E-17 121.7 19.2 116 101-255 2-117 (257)
10 TIGR01250 pro_imino_pep_2 prol 99.4 1.2E-11 2.6E-16 120.3 21.0 130 86-254 3-132 (288)
11 PRK10673 acyl-CoA esterase; Pr 99.4 1.7E-11 3.6E-16 118.9 18.3 104 108-251 11-114 (255)
12 PRK00870 haloalkane dehalogena 99.4 9.2E-11 2E-15 117.5 23.6 140 68-252 8-149 (302)
13 PHA02857 monoglyceride lipase; 99.3 8.7E-11 1.9E-15 115.7 20.1 125 96-255 9-134 (276)
14 TIGR03056 bchO_mg_che_rel puta 99.3 8.4E-11 1.8E-15 114.9 19.5 109 110-256 25-133 (278)
15 PLN02824 hydrolase, alpha/beta 99.3 9.7E-11 2.1E-15 116.7 19.6 123 89-253 12-137 (294)
16 TIGR03343 biphenyl_bphD 2-hydr 99.3 4.7E-10 1E-14 110.5 20.1 60 389-472 222-281 (282)
17 PRK03204 haloalkane dehalogena 99.2 2.7E-10 5.9E-15 113.5 16.8 121 87-253 16-136 (286)
18 PLN02679 hydrolase, alpha/beta 99.2 9.9E-10 2.2E-14 113.2 21.1 127 87-253 63-191 (360)
19 PLN02298 hydrolase, alpha/beta 99.2 7.7E-10 1.7E-14 112.3 19.6 137 86-255 33-171 (330)
20 PLN02385 hydrolase; alpha/beta 99.2 6.2E-10 1.3E-14 114.1 18.3 128 96-254 70-198 (349)
21 PF12697 Abhydrolase_6: Alpha/ 99.2 1.3E-10 2.9E-15 108.2 11.9 104 116-256 1-104 (228)
22 PRK03592 haloalkane dehalogena 99.2 2.9E-10 6.3E-15 113.3 14.2 115 97-255 16-130 (295)
23 TIGR02240 PHA_depoly_arom poly 99.2 1.6E-09 3.4E-14 107.0 18.3 117 97-254 11-127 (276)
24 TIGR02427 protocat_pcaD 3-oxoa 99.2 1.7E-09 3.7E-14 102.6 17.7 59 390-472 193-251 (251)
25 PRK10349 carboxylesterase BioH 99.2 1.7E-09 3.8E-14 105.2 17.6 60 389-472 195-254 (256)
26 PLN03084 alpha/beta hydrolase 99.1 7.2E-09 1.6E-13 107.5 20.5 133 82-254 101-233 (383)
27 TIGR01738 bioH putative pimelo 99.1 5.1E-09 1.1E-13 99.1 17.4 59 389-471 187-245 (245)
28 PRK11126 2-succinyl-6-hydroxy- 99.1 1.2E-09 2.7E-14 105.0 12.7 101 112-252 1-101 (242)
29 PLN03087 BODYGUARD 1 domain co 99.1 1.2E-08 2.7E-13 108.3 20.5 134 83-252 174-308 (481)
30 TIGR03695 menH_SHCHC 2-succiny 99.0 8.3E-09 1.8E-13 97.5 15.4 105 113-253 1-105 (251)
31 PLN02894 hydrolase, alpha/beta 99.0 3.1E-08 6.6E-13 103.7 20.3 119 99-253 93-211 (402)
32 TIGR01249 pro_imino_pep_1 prol 99.0 2.3E-08 5E-13 100.5 18.7 125 87-254 6-131 (306)
33 PLN02652 hydrolase; alpha/beta 99.0 2.2E-08 4.7E-13 104.4 18.3 127 97-255 120-247 (395)
34 PRK14875 acetoin dehydrogenase 99.0 2.2E-08 4.8E-13 102.7 18.0 103 111-252 129-231 (371)
35 PRK08775 homoserine O-acetyltr 98.9 2.2E-08 4.8E-13 102.4 16.1 62 390-474 277-339 (343)
36 PRK10749 lysophospholipase L2; 98.9 5.5E-08 1.2E-12 99.0 18.6 125 97-254 40-167 (330)
37 PLN02965 Probable pheophorbida 98.9 3.2E-08 7E-13 96.6 15.7 59 390-472 193-251 (255)
38 PLN02578 hydrolase 98.9 4E-08 8.7E-13 101.0 17.1 112 97-252 75-186 (354)
39 KOG4178 Soluble epoxide hydrol 98.9 4.8E-08 1.1E-12 96.8 16.4 118 83-234 20-137 (322)
40 TIGR01607 PST-A Plasmodium sub 98.9 8.2E-08 1.8E-12 97.9 17.9 150 96-255 6-187 (332)
41 PLN02980 2-oxoglutarate decarb 98.8 1.2E-07 2.7E-12 114.5 19.9 117 100-252 1356-1479(1655)
42 PRK07581 hypothetical protein; 98.8 4.5E-07 9.8E-12 92.4 20.9 59 390-472 275-334 (339)
43 KOG4409 Predicted hydrolase/ac 98.8 2.4E-07 5.2E-12 92.4 17.4 135 84-257 64-199 (365)
44 PRK06489 hypothetical protein; 98.8 3.9E-07 8.5E-12 93.9 19.7 140 83-252 39-188 (360)
45 PRK00175 metX homoserine O-ace 98.8 2.7E-07 5.9E-12 95.8 18.5 65 390-474 309-374 (379)
46 COG1506 DAP2 Dipeptidyl aminop 98.7 1.2E-07 2.6E-12 104.5 13.1 133 91-255 369-509 (620)
47 PLN02511 hydrolase 98.6 3.8E-07 8.2E-12 95.1 11.3 116 88-230 74-193 (388)
48 PLN02211 methyl indole-3-aceta 98.5 2.8E-06 6.1E-11 84.2 15.6 107 111-253 16-122 (273)
49 TIGR01392 homoserO_Ac_trn homo 98.5 1.5E-05 3.3E-10 81.8 21.2 63 390-472 288-351 (351)
50 KOG1454 Predicted hydrolase/ac 98.5 3E-06 6.4E-11 86.2 15.3 61 390-474 264-324 (326)
51 PRK05077 frsA fermentation/res 98.5 4.3E-06 9.2E-11 87.9 16.8 80 158-254 222-301 (414)
52 PF00561 Abhydrolase_1: alpha/ 98.4 1E-06 2.2E-11 83.0 9.3 56 389-468 174-229 (230)
53 PRK05855 short chain dehydroge 98.4 6.1E-06 1.3E-10 89.8 16.6 101 97-228 12-112 (582)
54 COG2267 PldB Lysophospholipase 98.4 7.8E-06 1.7E-10 82.1 14.7 277 86-475 10-295 (298)
55 PRK10566 esterase; Provisional 98.3 1.5E-05 3.2E-10 77.2 14.1 62 390-473 186-247 (249)
56 PLN02872 triacylglycerol lipas 98.3 9.8E-06 2.1E-10 84.5 13.0 61 390-473 325-388 (395)
57 TIGR03100 hydr1_PEP hydrolase, 98.3 4.8E-05 1E-09 75.4 17.2 80 158-255 57-136 (274)
58 PRK10985 putative hydrolase; P 98.2 7E-05 1.5E-09 76.0 18.3 132 90-254 36-169 (324)
59 COG0596 MhpC Predicted hydrola 98.2 3.8E-05 8.3E-10 71.8 14.4 104 113-254 21-124 (282)
60 PRK06765 homoserine O-acetyltr 98.2 0.00019 4.1E-09 74.9 20.8 67 388-474 321-388 (389)
61 PF00326 Peptidase_S9: Prolyl 98.2 9.5E-06 2.1E-10 76.9 9.8 92 157-258 13-104 (213)
62 PLN02442 S-formylglutathione h 98.0 0.00029 6.2E-09 70.3 16.7 57 189-256 125-181 (283)
63 PF10340 DUF2424: Protein of u 97.9 1.9E-05 4.1E-10 80.7 6.4 128 100-257 106-239 (374)
64 KOG1455 Lysophospholipase [Lip 97.9 0.00088 1.9E-08 66.1 17.6 129 96-254 36-165 (313)
65 PRK10115 protease 2; Provision 97.5 0.0014 3E-08 73.4 14.6 139 90-257 419-563 (686)
66 PRK11460 putative hydrolase; P 97.5 0.0017 3.8E-08 62.7 13.5 62 390-471 148-209 (232)
67 PRK13604 luxD acyl transferase 97.4 0.0046 9.9E-08 62.1 15.2 122 97-254 19-142 (307)
68 KOG2564 Predicted acetyltransf 97.4 0.00039 8.5E-09 67.6 6.5 108 111-250 72-179 (343)
69 TIGR03101 hydr2_PEP hydrolase, 97.3 0.0015 3.1E-08 64.7 10.7 126 97-257 9-138 (266)
70 KOG2382 Predicted alpha/beta h 97.3 0.0037 7.9E-08 62.5 13.3 61 389-473 252-312 (315)
71 PRK11071 esterase YqiA; Provis 97.3 0.0013 2.9E-08 61.5 9.3 54 390-472 136-189 (190)
72 TIGR01840 esterase_phb esteras 97.2 0.0014 3.1E-08 62.2 8.6 119 110-253 10-130 (212)
73 TIGR02821 fghA_ester_D S-formy 97.1 0.0058 1.3E-07 60.5 12.2 42 207-256 135-176 (275)
74 TIGR01836 PHA_synth_III_C poly 97.1 0.015 3.2E-07 59.7 15.4 61 390-473 286-349 (350)
75 cd00707 Pancreat_lipase_like P 97.0 0.00055 1.2E-08 68.0 3.8 112 111-252 34-146 (275)
76 TIGR01838 PHA_synth_I poly(R)- 96.9 0.034 7.5E-07 60.2 16.8 85 158-256 220-305 (532)
77 KOG2100 Dipeptidyl aminopeptid 96.7 0.008 1.7E-07 67.9 10.3 63 390-472 682-745 (755)
78 COG0400 Predicted esterase [Ge 96.6 0.042 9.1E-07 52.2 12.8 59 390-473 146-204 (207)
79 TIGR03230 lipo_lipase lipoprot 96.4 0.0095 2.1E-07 62.9 8.2 81 158-252 73-153 (442)
80 PRK05371 x-prolyl-dipeptidyl a 96.4 0.065 1.4E-06 60.8 15.0 101 150-272 271-385 (767)
81 PF03583 LIP: Secretory lipase 96.4 0.14 3E-06 51.3 15.8 69 390-478 219-289 (290)
82 KOG1552 Predicted alpha/beta h 96.3 0.021 4.5E-07 55.4 9.2 105 112-255 59-165 (258)
83 PF10230 DUF2305: Uncharacteri 96.3 0.12 2.7E-06 51.0 15.0 119 113-253 2-122 (266)
84 KOG1515 Arylacetamide deacetyl 96.3 0.039 8.5E-07 56.2 11.2 137 96-257 70-211 (336)
85 TIGR00976 /NonD putative hydro 96.2 0.017 3.8E-07 63.0 9.1 130 96-256 5-135 (550)
86 PLN00021 chlorophyllase 96.2 0.012 2.7E-07 59.5 7.2 116 110-255 49-168 (313)
87 PF08386 Abhydrolase_4: TAP-li 96.1 0.019 4.2E-07 48.2 7.0 65 390-478 34-98 (103)
88 COG3509 LpqC Poly(3-hydroxybut 96.1 0.039 8.5E-07 54.5 9.9 124 97-253 44-179 (312)
89 PF03096 Ndr: Ndr family; Int 96.0 0.028 6E-07 55.6 8.2 93 155-267 52-144 (283)
90 PRK10162 acetyl esterase; Prov 95.6 0.033 7.2E-07 56.4 7.2 45 209-255 153-197 (318)
91 PF00975 Thioesterase: Thioest 95.1 0.06 1.3E-06 51.1 7.1 103 114-253 1-104 (229)
92 PF07519 Tannase: Tannase and 95.0 0.79 1.7E-05 49.2 15.9 89 378-478 341-431 (474)
93 PF10503 Esterase_phd: Esteras 94.6 0.092 2E-06 50.4 6.8 49 197-253 84-132 (220)
94 KOG4391 Predicted alpha/beta h 94.6 0.082 1.8E-06 50.0 6.2 122 98-255 65-186 (300)
95 COG3208 GrsT Predicted thioest 94.5 0.9 1.9E-05 43.9 13.2 59 390-472 176-234 (244)
96 KOG2984 Predicted hydrolase [G 94.0 0.38 8.3E-06 45.1 9.1 61 390-474 216-276 (277)
97 PRK07868 acyl-CoA synthetase; 94.0 0.45 9.7E-06 55.9 12.1 61 390-474 297-361 (994)
98 PF12695 Abhydrolase_5: Alpha/ 93.7 0.12 2.6E-06 44.8 5.2 92 115-251 1-93 (145)
99 KOG1838 Alpha/beta hydrolase [ 93.4 0.36 7.8E-06 50.1 8.8 132 87-253 95-236 (409)
100 COG1647 Esterase/lipase [Gener 93.4 0.5 1.1E-05 45.0 8.9 61 390-472 181-242 (243)
101 KOG2281 Dipeptidyl aminopeptid 93.2 0.4 8.6E-06 52.0 8.9 56 380-455 792-847 (867)
102 PF02129 Peptidase_S15: X-Pro 92.5 0.14 3.1E-06 50.4 4.2 84 158-257 57-140 (272)
103 PF05448 AXE1: Acetyl xylan es 92.0 2.2 4.7E-05 43.4 12.3 56 390-468 262-318 (320)
104 PF06500 DUF1100: Alpha/beta h 91.3 0.12 2.6E-06 53.9 2.2 82 157-255 217-298 (411)
105 PF02230 Abhydrolase_2: Phosph 91.3 0.37 8.1E-06 45.7 5.5 59 390-472 155-213 (216)
106 cd00312 Esterase_lipase Estera 91.3 0.39 8.5E-06 51.5 6.3 38 191-229 158-195 (493)
107 PF12695 Abhydrolase_5: Alpha/ 91.0 0.41 8.9E-06 41.4 5.1 46 386-454 100-145 (145)
108 KOG2931 Differentiation-relate 90.8 7.3 0.00016 38.9 13.8 63 390-476 246-308 (326)
109 KOG3975 Uncharacterized conser 90.6 0.33 7.2E-06 47.0 4.3 102 111-228 27-128 (301)
110 KOG4667 Predicted esterase [Li 90.5 3.8 8.1E-05 39.1 11.0 180 161-460 65-245 (269)
111 PLN02454 triacylglycerol lipas 90.4 0.6 1.3E-05 48.8 6.4 69 186-255 205-273 (414)
112 PF02230 Abhydrolase_2: Phosph 90.1 0.47 1E-05 45.0 5.0 59 189-257 86-144 (216)
113 PF01764 Lipase_3: Lipase (cla 89.2 0.68 1.5E-05 40.2 5.0 62 188-253 45-106 (140)
114 PF07859 Abhydrolase_3: alpha/ 88.6 0.72 1.6E-05 43.0 5.0 65 187-255 46-112 (211)
115 PF05577 Peptidase_S28: Serine 87.6 1.6 3.5E-05 46.1 7.4 99 157-264 58-159 (434)
116 cd00741 Lipase Lipase. Lipase 87.3 1.3 2.8E-05 39.5 5.6 44 188-234 9-52 (153)
117 COG4099 Predicted peptidase [G 86.6 9.4 0.0002 38.2 11.3 53 194-254 253-305 (387)
118 PF05990 DUF900: Alpha/beta hy 86.0 0.95 2.1E-05 43.8 4.3 66 188-256 74-140 (233)
119 cd00519 Lipase_3 Lipase (class 85.7 1.6 3.5E-05 41.7 5.7 60 188-253 109-168 (229)
120 COG0657 Aes Esterase/lipase [L 85.5 1.5 3.3E-05 44.0 5.6 45 209-257 151-195 (312)
121 PF05728 UPF0227: Uncharacteri 85.3 1 2.2E-05 42.2 3.9 42 206-258 55-96 (187)
122 PRK10439 enterobactin/ferric e 84.0 4 8.7E-05 43.0 8.2 36 210-253 288-323 (411)
123 PRK10252 entF enterobactin syn 83.2 5.4 0.00012 48.0 10.0 104 112-252 1067-1170(1296)
124 PF11144 DUF2920: Protein of u 82.2 2.3 5E-05 44.3 5.3 63 188-258 161-224 (403)
125 PLN02733 phosphatidylcholine-s 82.0 2.8 6.1E-05 44.5 6.1 55 167-230 128-182 (440)
126 TIGR03502 lipase_Pla1_cef extr 81.8 4.4 9.5E-05 46.1 7.8 98 113-230 449-575 (792)
127 PF11288 DUF3089: Protein of u 81.6 1.8 3.9E-05 41.1 4.0 45 188-234 75-119 (207)
128 KOG2183 Prolylcarboxypeptidase 80.9 2 4.3E-05 44.6 4.3 67 158-228 111-185 (492)
129 PF00151 Lipase: Lipase; Inte 80.4 0.35 7.5E-06 49.4 -1.3 104 111-233 69-173 (331)
130 PLN02571 triacylglycerol lipas 79.7 4.5 9.7E-05 42.4 6.5 67 187-254 204-276 (413)
131 PF12146 Hydrolase_4: Putative 78.5 11 0.00023 29.9 7.0 78 98-198 2-79 (79)
132 PF06057 VirJ: Bacterial virul 76.4 3.2 6.9E-05 38.8 3.9 60 185-251 46-105 (192)
133 KOG4627 Kynurenine formamidase 76.3 2.1 4.5E-05 40.5 2.6 74 168-255 101-174 (270)
134 COG0627 Predicted esterase [Ge 74.1 6.7 0.00014 39.8 5.8 130 112-256 52-190 (316)
135 PLN02753 triacylglycerol lipas 73.6 7.9 0.00017 41.7 6.4 70 185-254 285-360 (531)
136 TIGR01839 PHA_synth_II poly(R) 73.0 33 0.00071 37.6 11.0 66 185-256 266-331 (560)
137 smart00824 PKS_TE Thioesterase 72.4 14 0.0003 33.5 7.3 76 158-251 25-100 (212)
138 KOG2551 Phospholipase/carboxyh 72.2 9.5 0.00021 36.5 5.9 57 390-471 163-221 (230)
139 PF07819 PGAP1: PGAP1-like pro 71.2 20 0.00042 34.4 8.1 122 112-256 3-127 (225)
140 PF03283 PAE: Pectinacetyleste 70.8 42 0.0009 34.8 10.9 150 98-255 35-199 (361)
141 PLN02719 triacylglycerol lipas 70.7 8.8 0.00019 41.2 6.0 68 187-254 273-346 (518)
142 COG1073 Hydrolases of the alph 69.9 9.7 0.00021 36.6 5.9 61 391-473 233-296 (299)
143 PF03959 FSH1: Serine hydrolas 69.3 5.2 0.00011 37.9 3.6 48 390-461 161-208 (212)
144 PF08840 BAAT_C: BAAT / Acyl-C 68.3 6.4 0.00014 37.4 4.0 48 197-253 9-56 (213)
145 PF05677 DUF818: Chlamydia CHL 67.6 12 0.00027 38.1 6.0 93 109-226 133-231 (365)
146 PF11187 DUF2974: Protein of u 66.6 8.8 0.00019 36.9 4.6 53 191-251 69-121 (224)
147 PF06821 Ser_hydrolase: Serine 66.2 9.1 0.0002 35.1 4.5 43 391-458 115-157 (171)
148 PF10081 Abhydrolase_9: Alpha/ 66.1 13 0.00027 37.0 5.6 37 186-222 85-121 (289)
149 PRK04940 hypothetical protein; 65.2 10 0.00022 35.2 4.5 38 210-258 60-97 (180)
150 PRK14566 triosephosphate isome 65.1 16 0.00034 36.0 6.1 61 187-256 188-248 (260)
151 PRK14567 triosephosphate isome 64.1 18 0.0004 35.4 6.3 61 187-256 178-238 (253)
152 PLN02408 phospholipase A1 63.7 10 0.00022 39.2 4.6 46 188-234 179-224 (365)
153 PLN02761 lipase class 3 family 63.2 17 0.00037 39.1 6.4 68 186-253 267-342 (527)
154 PLN02310 triacylglycerol lipas 62.9 15 0.00032 38.5 5.7 65 187-254 185-250 (405)
155 PLN02934 triacylglycerol lipas 62.4 16 0.00035 39.2 6.0 40 191-233 305-344 (515)
156 PLN00413 triacylglycerol lipas 62.2 9 0.0002 40.8 4.0 39 192-233 269-307 (479)
157 KOG3101 Esterase D [General fu 62.2 36 0.00077 32.6 7.5 152 83-257 7-180 (283)
158 COG2945 Predicted hydrolase of 62.1 8.2 0.00018 36.2 3.3 57 167-231 68-124 (210)
159 PF05057 DUF676: Putative seri 61.2 11 0.00024 35.9 4.2 50 185-235 54-103 (217)
160 PLN02847 triacylglycerol lipas 60.1 14 0.00031 40.3 5.2 68 182-255 222-294 (633)
161 PF01738 DLH: Dienelactone hyd 60.0 36 0.00078 31.9 7.5 60 390-469 145-209 (218)
162 PLN02324 triacylglycerol lipas 58.9 21 0.00046 37.5 6.0 48 186-234 192-239 (415)
163 KOG2565 Predicted hydrolases o 57.9 60 0.0013 33.7 8.7 133 97-257 133-268 (469)
164 PLN02162 triacylglycerol lipas 57.0 13 0.00027 39.7 4.0 40 191-233 262-301 (475)
165 PLN02802 triacylglycerol lipas 56.6 21 0.00045 38.4 5.6 63 188-253 309-371 (509)
166 PF06342 DUF1057: Alpha/beta h 55.1 80 0.0017 31.6 8.9 90 380-471 202-296 (297)
167 PF06259 Abhydrolase_8: Alpha/ 54.6 27 0.00059 32.3 5.4 65 157-230 62-129 (177)
168 COG4757 Predicted alpha/beta h 54.4 26 0.00057 33.9 5.3 67 158-229 57-124 (281)
169 PF08237 PE-PPE: PE-PPE domain 54.0 40 0.00087 32.4 6.7 61 185-251 28-88 (225)
170 KOG3079 Uridylate kinase/adeny 53.4 7.8 0.00017 36.1 1.6 17 111-127 5-21 (195)
171 PLN03037 lipase class 3 family 53.1 25 0.00054 37.9 5.5 47 188-234 295-342 (525)
172 KOG4569 Predicted lipase [Lipi 51.5 25 0.00055 35.9 5.2 56 192-251 156-211 (336)
173 PF05576 Peptidase_S37: PS-10 50.8 87 0.0019 33.0 8.8 93 108-226 58-150 (448)
174 COG2272 PnbA Carboxylesterase 50.7 21 0.00045 38.2 4.4 32 195-227 166-197 (491)
175 PLN02429 triosephosphate isome 50.6 38 0.00082 34.3 6.1 60 188-256 239-299 (315)
176 PF08840 BAAT_C: BAAT / Acyl-C 50.1 17 0.00037 34.4 3.5 48 390-455 115-163 (213)
177 COG3319 Thioesterase domains o 48.1 1.2E+02 0.0026 29.8 9.1 59 185-254 46-104 (257)
178 PLN02561 triosephosphate isome 46.6 47 0.001 32.6 5.9 59 188-255 180-239 (253)
179 COG4425 Predicted membrane pro 46.5 40 0.00087 35.7 5.6 36 187-222 374-409 (588)
180 PF00681 Plectin: Plectin repe 44.4 15 0.00034 25.6 1.6 35 248-282 9-43 (45)
181 PF00756 Esterase: Putative es 44.2 14 0.00031 35.3 1.9 51 197-256 102-153 (251)
182 COG2945 Predicted hydrolase of 39.9 25 0.00054 33.0 2.7 56 390-471 149-204 (210)
183 KOG3043 Predicted hydrolase re 39.5 59 0.0013 31.3 5.2 72 390-472 164-238 (242)
184 cd00311 TIM Triosephosphate is 38.8 86 0.0019 30.5 6.4 59 188-256 176-235 (242)
185 PF08538 DUF1749: Protein of u 38.2 48 0.001 33.4 4.6 71 185-258 82-153 (303)
186 KOG3724 Negative regulator of 38.1 32 0.00069 38.9 3.6 98 114-228 90-200 (973)
187 PF07389 DUF1500: Protein of u 38.1 27 0.00058 28.2 2.2 28 191-220 7-34 (100)
188 PF07224 Chlorophyllase: Chlor 37.9 32 0.00069 34.0 3.2 42 209-256 119-160 (307)
189 PF02450 LCAT: Lecithin:choles 37.7 29 0.00063 36.2 3.2 40 189-232 102-141 (389)
190 KOG2182 Hydrolytic enzymes of 37.2 50 0.0011 35.4 4.7 91 159-260 119-214 (514)
191 PF01083 Cutinase: Cutinase; 34.4 73 0.0016 29.3 5.0 83 160-255 41-125 (179)
192 KOG3253 Predicted alpha/beta h 34.4 65 0.0014 35.5 5.1 50 385-457 299-348 (784)
193 PRK00042 tpiA triosephosphate 33.6 1.2E+02 0.0026 29.7 6.5 75 161-256 162-239 (250)
194 PRK14565 triosephosphate isome 33.5 89 0.0019 30.4 5.5 53 187-256 173-225 (237)
195 PTZ00333 triosephosphate isome 33.4 98 0.0021 30.4 5.9 60 187-255 182-242 (255)
196 PLN03082 Iron-sulfur cluster a 33.2 32 0.00069 31.4 2.3 66 111-177 76-148 (163)
197 PF12740 Chlorophyllase2: Chlo 33.0 53 0.0012 32.3 3.9 66 185-253 62-131 (259)
198 COG0429 Predicted hydrolase of 32.7 1.9E+02 0.0042 29.5 7.9 121 97-252 60-185 (345)
199 TIGR02821 fghA_ester_D S-formy 32.2 56 0.0012 32.0 4.1 50 390-459 211-261 (275)
200 COG4782 Uncharacterized protei 31.6 63 0.0014 33.3 4.3 117 111-256 114-237 (377)
201 TIGR01911 HesB_rel_seleno HesB 30.0 48 0.001 27.1 2.6 17 115-132 28-44 (92)
202 COG3150 Predicted esterase [Ge 29.8 48 0.001 30.5 2.8 58 185-260 41-98 (191)
203 TIGR01840 esterase_phb esteras 29.0 43 0.00093 31.3 2.5 28 391-418 169-196 (212)
204 PF10503 Esterase_phd: Esteras 28.5 53 0.0012 31.5 3.1 26 390-415 169-194 (220)
205 PRK11190 Fe/S biogenesis prote 28.0 42 0.0009 31.5 2.2 62 116-178 26-95 (192)
206 PF03403 PAF-AH_p_II: Platelet 27.9 31 0.00066 36.0 1.4 38 211-257 229-266 (379)
207 TIGR01849 PHB_depoly_PhaZ poly 27.4 69 0.0015 33.7 3.9 57 195-258 157-213 (406)
208 COG3896 Chloramphenicol 3-O-ph 27.1 45 0.00098 30.5 2.1 27 113-140 22-52 (205)
209 PF01738 DLH: Dienelactone hyd 27.1 39 0.00085 31.6 1.9 54 188-251 77-130 (218)
210 KOG2369 Lecithin:cholesterol a 27.1 54 0.0012 34.9 3.0 74 391-475 374-453 (473)
211 PRK13962 bifunctional phosphog 26.8 1.2E+02 0.0026 34.0 5.7 61 187-256 574-635 (645)
212 KOG2541 Palmitoyl protein thio 26.3 1.7E+02 0.0037 29.0 6.1 94 109-233 20-115 (296)
213 KOG1516 Carboxylesterase and r 25.7 2.1E+02 0.0046 30.9 7.5 33 195-228 181-213 (545)
214 PF09292 Neil1-DNA_bind: Endon 25.6 40 0.00087 22.7 1.1 12 113-124 24-35 (39)
215 PF00121 TIM: Triosephosphate 25.3 49 0.0011 32.2 2.2 61 187-256 177-238 (244)
216 PF07859 Abhydrolase_3: alpha/ 25.3 64 0.0014 29.6 3.0 44 391-456 167-210 (211)
217 PRK06762 hypothetical protein; 25.1 41 0.00088 30.0 1.5 13 114-126 2-14 (166)
218 PF10605 3HBOH: 3HB-oligomer h 24.8 1.3E+02 0.0027 33.4 5.2 82 381-478 542-642 (690)
219 COG2936 Predicted acyl esteras 23.7 1.1E+02 0.0024 33.6 4.6 83 159-257 81-163 (563)
220 TIGR03712 acc_sec_asp2 accesso 23.6 1.3E+02 0.0029 32.3 5.1 113 99-255 277-392 (511)
221 COG3946 VirJ Type IV secretory 23.3 99 0.0021 32.5 4.0 45 185-232 304-348 (456)
222 COG3673 Uncharacterized conser 22.6 69 0.0015 32.6 2.6 88 158-269 65-163 (423)
223 KOG1553 Predicted alpha/beta h 21.9 1.6E+02 0.0034 30.4 4.9 103 111-251 241-343 (517)
224 PF15253 STIL_N: SCL-interrupt 21.6 92 0.002 32.7 3.4 35 84-121 199-235 (410)
225 PRK15492 triosephosphate isome 21.3 2E+02 0.0043 28.4 5.6 60 187-256 188-248 (260)
226 PF06821 Ser_hydrolase: Serine 20.8 1.2E+02 0.0025 27.7 3.7 39 209-254 54-92 (171)
227 COG3545 Predicted esterase of 20.8 88 0.0019 29.0 2.8 35 209-251 58-92 (181)
228 COG3571 Predicted hydrolase of 20.8 1.1E+02 0.0024 28.1 3.3 27 206-232 85-111 (213)
229 PF13956 Ibs_toxin: Toxin Ibs, 20.5 58 0.0013 18.3 0.9 12 1-12 2-13 (19)
230 COG5153 CVT17 Putative lipase 20.3 46 0.001 33.2 0.9 23 206-228 272-294 (425)
231 KOG4540 Putative lipase essent 20.3 46 0.001 33.2 0.9 23 206-228 272-294 (425)
232 TIGR00419 tim triosephosphate 20.1 2.3E+02 0.0049 26.9 5.5 70 161-255 133-204 (205)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=9.7e-118 Score=916.79 Aligned_cols=412 Identities=49% Similarity=0.894 Sum_probs=380.8
Q ss_pred ccccCccccCCCCCCCCCceeEEeEEEecCCCCceeEEEEEEe-CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcC
Q 044068 65 LKEADKIEKLPGQPYGVEIDQYSGYVTVDPKAGRALFYYFVES-QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNS 143 (481)
Q Consensus 65 ~~~~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywffes-~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~ 143 (481)
..+.++|++|||++.+++|+||||||+|+++.+++|||||||| ++|++|||||||||||||||++ |+|.|+|||+++.
T Consensus 24 ~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~ 102 (454)
T KOG1282|consen 24 VDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKY 102 (454)
T ss_pred cchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcC
Confidence 3456789999999988899999999999998899999999999 9999999999999999999996 9999999999999
Q ss_pred CCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccc
Q 044068 144 DGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHY 223 (481)
Q Consensus 144 ~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 223 (481)
||.+|..|+|||||.|||||||||+||||||+++..++. .+|+.+|+|+++||++||++||||++|+|||+||||||||
T Consensus 103 ~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~Y 181 (454)
T KOG1282|consen 103 NGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHY 181 (454)
T ss_pred CCCcceeCCccccccccEEEEecCCcCCccccCCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEeccccccee
Confidence 988999999999999999999999999999999888776 4999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhcc--CCceecceeeeecCcccCcccccchhhhhhhhcccCCHHHHHhhhhcccCCc-------C-hHHH
Q 044068 224 IPQVALTILQFNK--NQTFINLKGLAMGDAWIDTETGNKGMFDFYWTHALISDEVIHGINSNCNFTK-------F-SKAC 293 (481)
Q Consensus 224 vP~lA~~i~~~n~--~~~~inLkGi~IGNg~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~c~~~~-------~-~~~C 293 (481)
||+||++|++.|+ ..+.|||||++||||++|+..|..++.+|+|.||+|+++.++.|++.|.... . +..|
T Consensus 182 VP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C 261 (454)
T KOG1282|consen 182 VPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKC 261 (454)
T ss_pred hHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHH
Confidence 9999999999997 4678999999999999999999999999999999999999999999998742 1 6799
Q ss_pred HHHHHHHH-HhcCCCccccccccCCCCCCCC----CCCCCCCCCchhHHHhhcCcHHHHHhhccCCCCCcccccccChhh
Q 044068 294 ASYLIKAY-ESMGNINILDIYAPLCSSSFST----SSVLPFDPCSEIYVHSYLNSPQVQKSLHANVTGIRGPWQDCSDTV 368 (481)
Q Consensus 294 ~~~~~~~~-~~~g~~n~ydi~~~~c~~~~~~----~~~~~~~~c~~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v 368 (481)
.++++.+. ...++++.|+++.+.|...... +....+++|...+.+.|||+++||+||||+...++ +|+.||+.+
T Consensus 262 ~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~-~W~~Cn~~v 340 (454)
T KOG1282|consen 262 NKAVEEFDSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIG-KWERCNDEV 340 (454)
T ss_pred HHHHHHHHHHHhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCC-cccccChhh
Confidence 99999888 5557899999999889741110 11345789988777999999999999999876433 799999999
Q ss_pred hhhcccCCCCcHHHHHHHHhcC-ceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeec-CeeceEEEeecceEEE
Q 044068 369 LRHWKDSPLTVLPSIQELMTSG-ISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQ-GEVGGYVVGYQNLTFV 446 (481)
Q Consensus 369 ~~~~~d~~~~~~~~l~~Ll~~~-irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~-~~~aG~~k~~~nltf~ 446 (481)
...|.+...+++|.+.+++.++ +|||||+||.|++||+.||++|+++|+++.+.+|+||+++ +|||||+++|+||||+
T Consensus 341 ~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~ 420 (454)
T KOG1282|consen 341 NYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFA 420 (454)
T ss_pred hcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEE
Confidence 8888899999999999999965 9999999999999999999999999999999999999995 8999999999999999
Q ss_pred EEcCCCccCCccChHHHHHHHHHHHcCCCCCCC
Q 044068 447 AIRGAGHMVPSSQPARALAFFSSFLDGKLPPAA 479 (481)
Q Consensus 447 ~V~~AGHmvP~dqP~~al~mi~~fl~~~~~~~~ 479 (481)
+|+|||||||+|||++|++||++||.|+++|.+
T Consensus 421 tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~~ 453 (454)
T KOG1282|consen 421 TVRGAGHMVPYDKPESALIMFQRFLNGQPLPST 453 (454)
T ss_pred EEeCCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999999999999875
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=1.8e-101 Score=803.78 Aligned_cols=400 Identities=28% Similarity=0.555 Sum_probs=344.9
Q ss_pred cccCccccCCCCCCCCCceeEEeEEEecCCCCceeEEEEEEe-CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCC
Q 044068 66 KEADKIEKLPGQPYGVEIDQYSGYVTVDPKAGRALFYYFVES-QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSD 144 (481)
Q Consensus 66 ~~~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywffes-~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~ 144 (481)
...++|+.|||++.++++++||||++|+++.+++|||||||| ++|+++||||||||||||||+ +|+|.|+|||+++.+
T Consensus 20 ~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~ 98 (437)
T PLN02209 20 RSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALKNK 98 (437)
T ss_pred CccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceeccC
Confidence 355789999999877899999999999887789999999999 889999999999999999999 799999999999876
Q ss_pred C-----CccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccc
Q 044068 145 G-----KSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESY 219 (481)
Q Consensus 145 ~-----~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESY 219 (481)
+ .++++|+|||++.|||||||||+||||||+++...+. +++++|+|+++||++||++||+|+++||||+||||
T Consensus 99 ~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESY 176 (437)
T PLN02209 99 VYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT--SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSY 176 (437)
T ss_pred CCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCc
Confidence 3 3789999999999999999999999999987654443 56677899999999999999999999999999999
Q ss_pred cccccHHHHHHHHHhcc--CCceecceeeeecCcccCcccccchhhhhhhhcccCCHHHHHhhhhcccCCc-----ChHH
Q 044068 220 AGHYIPQVALTILQFNK--NQTFINLKGLAMGDAWIDTETGNKGMFDFYWTHALISDEVIHGINSNCNFTK-----FSKA 292 (481)
Q Consensus 220 gG~yvP~lA~~i~~~n~--~~~~inLkGi~IGNg~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~c~~~~-----~~~~ 292 (481)
||||||.+|++|+++|+ ...+||||||+||||++||..|..++.+|++.+|+|++++++.+++.|.... .+..
T Consensus 177 aG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~ 256 (437)
T PLN02209 177 SGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKK 256 (437)
T ss_pred CceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHH
Confidence 99999999999999885 4568999999999999999999999999999999999999999999997421 2678
Q ss_pred HHHHHHHHHHhcCCCccccccccCCCCCCCCCCCCCCCCCch---hHHHhhcCcHHHHHhhccCCCCCcccccccChhhh
Q 044068 293 CASYLIKAYESMGNINILDIYAPLCSSSFSTSSVLPFDPCSE---IYVHSYLNSPQVQKSLHANVTGIRGPWQDCSDTVL 369 (481)
Q Consensus 293 C~~~~~~~~~~~g~~n~ydi~~~~c~~~~~~~~~~~~~~c~~---~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~ 369 (481)
|.++........+.+|.|++....|...... ....+|.+ ..+..|||+++||+||||+... ...|..|+..+
T Consensus 257 C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~~---~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~~~~~~- 331 (437)
T PLN02209 257 CLKLVEEYHKCTDNINSHHTLIANCDDSNTQ---HISPDCYYYPYHLVECWANNESVREALHVDKGS-IGEWIRDHRGI- 331 (437)
T ss_pred HHHHHHHHHHHhhcCCccccccccccccccc---cCCCCcccccHHHHHHHhCCHHHHHHhCCCCCC-CCCCccccchh-
Confidence 9988777666666788877555567532211 11235643 3578999999999999998432 24799998755
Q ss_pred hhcc-cCCCCcHHHHHHHHhcCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecc-eEEEE
Q 044068 370 RHWK-DSPLTVLPSIQELMTSGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQN-LTFVA 447 (481)
Q Consensus 370 ~~~~-d~~~~~~~~l~~Ll~~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~n-ltf~~ 447 (481)
.+. |.+ ++.+.+.++|++|+|||||+||.|+|||+.|+++|+++|+|+++++|++|+++++++||+|+|+| |||++
T Consensus 332 -~~~~d~~-~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~ 409 (437)
T PLN02209 332 -PYKSDIR-SSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFAT 409 (437)
T ss_pred -hcccchh-hhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEE
Confidence 243 443 34555555566789999999999999999999999999999999999999999999999999996 99999
Q ss_pred EcCCCccCCccChHHHHHHHHHHHcCCCC
Q 044068 448 IRGAGHMVPSSQPARALAFFSSFLDGKLP 476 (481)
Q Consensus 448 V~~AGHmvP~dqP~~al~mi~~fl~~~~~ 476 (481)
|+||||||| +||++|++||++|+.++++
T Consensus 410 V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 410 VKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred EcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 999999998 6999999999999999875
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=2e-101 Score=803.36 Aligned_cols=395 Identities=30% Similarity=0.593 Sum_probs=346.0
Q ss_pred CccccCCCCCCCCCceeEEeEEEecCCCCceeEEEEEEe-CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCC---
Q 044068 69 DKIEKLPGQPYGVEIDQYSGYVTVDPKAGRALFYYFVES-QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSD--- 144 (481)
Q Consensus 69 ~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywffes-~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~--- 144 (481)
+.|++|||+..++++++||||++|+++.+++|||||||| ++|+++||||||||||||||+ .|+|+|+|||+++.+
T Consensus 21 ~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~~~ 99 (433)
T PLN03016 21 SIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEVFN 99 (433)
T ss_pred CeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccccC
Confidence 568999999777889999999999877789999999999 889999999999999999999 699999999998643
Q ss_pred --CCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEccccccc
Q 044068 145 --GKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGH 222 (481)
Q Consensus 145 --~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 222 (481)
+.++++|++||++.|||||||||+||||||+++...+. ++++.|+++++||++||++||+|+++||||+|||||||
T Consensus 100 ~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~ 177 (433)
T PLN03016 100 GSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGM 177 (433)
T ss_pred CCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccce
Confidence 24789999999999999999999999999987665442 56677899999999999999999999999999999999
Q ss_pred ccHHHHHHHHHhcc--CCceecceeeeecCcccCcccccchhhhhhhhcccCCHHHHHhhhhcccCCc-----ChHHHHH
Q 044068 223 YIPQVALTILQFNK--NQTFINLKGLAMGDAWIDTETGNKGMFDFYWTHALISDEVIHGINSNCNFTK-----FSKACAS 295 (481)
Q Consensus 223 yvP~lA~~i~~~n~--~~~~inLkGi~IGNg~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~c~~~~-----~~~~C~~ 295 (481)
|||++|++|+++|+ ...+||||||+||||++||..|..++.+|+|.||+|++++++.+++.|.... .+..|..
T Consensus 178 yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C~~ 257 (433)
T PLN03016 178 IVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLK 257 (433)
T ss_pred ehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHHHH
Confidence 99999999999886 3568999999999999999999999999999999999999999999997431 2678999
Q ss_pred HHHHHHHhcCCCccccccccCCCCCCCCCCCCCCCCCch---hHHHhhcCcHHHHHhhccCCCCCcccccccChhhhhhc
Q 044068 296 YLIKAYESMGNINILDIYAPLCSSSFSTSSVLPFDPCSE---IYVHSYLNSPQVQKSLHANVTGIRGPWQDCSDTVLRHW 372 (481)
Q Consensus 296 ~~~~~~~~~g~~n~ydi~~~~c~~~~~~~~~~~~~~c~~---~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~~~~ 372 (481)
+...+....+.+|+|+++.+.|.... ...+.|.. ..+..|||+++||+||||+... ...|..|+..+. +
T Consensus 258 ~~~~~~~~~~~~n~yni~~~~~~~~~-----~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~cn~~v~--~ 329 (433)
T PLN03016 258 LTEEYHKCTAKINIHHILTPDCDVTN-----VTSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNRTIP--Y 329 (433)
T ss_pred HHHHHHHHhcCCChhhccCCcccccc-----cCCCcccccchHHHHHHhCCHHHHHHhCCCCCC-CCCCccCCcccc--c
Confidence 88877777889999999976663211 01235653 3678999999999999997521 247999999885 3
Q ss_pred c-cCCCCcHHHHHHHHhcCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecc-eEEEEEcC
Q 044068 373 K-DSPLTVLPSIQELMTSGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQN-LTFVAIRG 450 (481)
Q Consensus 373 ~-d~~~~~~~~l~~Ll~~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~n-ltf~~V~~ 450 (481)
. |.+ +..+.+.+++.+++|||||+||.|++||+.|+++|+++|+|+++++|++|+++++++||+|+|+| |||++|+|
T Consensus 330 ~~d~~-~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~ 408 (433)
T PLN03016 330 NHDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKA 408 (433)
T ss_pred ccccc-hhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcC
Confidence 3 433 45555566666789999999999999999999999999999999999999999999999999986 99999999
Q ss_pred CCccCCccChHHHHHHHHHHHcCCCC
Q 044068 451 AGHMVPSSQPARALAFFSSFLDGKLP 476 (481)
Q Consensus 451 AGHmvP~dqP~~al~mi~~fl~~~~~ 476 (481)
|||||| +||++|++||++|+.++++
T Consensus 409 AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 409 GGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred CCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 999998 7999999999999999864
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=3.1e-101 Score=804.83 Aligned_cols=395 Identities=44% Similarity=0.811 Sum_probs=326.7
Q ss_pred CCCCCCCCceeEEeEEEecCCCCceeEEEEEEe-CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCC-CCccccCC
Q 044068 75 PGQPYGVEIDQYSGYVTVDPKAGRALFYYFVES-QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSD-GKSLSHNE 152 (481)
Q Consensus 75 pg~~~~~~~~~ysGyl~v~~~~~~~lFywffes-~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~-~~~l~~n~ 152 (481)
||++.++++++|||||+|+++.+++|||||||| .+|+++||||||||||||||| +|+|.|+|||+++.+ ..+++.||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 788877899999999999977789999999999 889999999999999999999 699999999999954 36899999
Q ss_pred cCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHH
Q 044068 153 YAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTIL 232 (481)
Q Consensus 153 ~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 232 (481)
+||++.+||||||||+||||||+.+..++.. +++++|+++++||++||.+||+|+++||||+||||||||||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVW-NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccc-hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 9999999999999999999999987765553 899999999999999999999999999999999999999999999999
Q ss_pred Hhcc--CCceecceeeeecCcccCcccccchhhhhhhhcccCCHHHHHhhhhcccCC----cChHHHHHHHHHHHH----
Q 044068 233 QFNK--NQTFINLKGLAMGDAWIDTETGNKGMFDFYWTHALISDEVIHGINSNCNFT----KFSKACASYLIKAYE---- 302 (481)
Q Consensus 233 ~~n~--~~~~inLkGi~IGNg~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~c~~~----~~~~~C~~~~~~~~~---- 302 (481)
++|+ ...+||||||+||||++||..|..++.+|++.+|+|++++++.+.+.|... .....|.+....+..
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 238 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAI 238 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhccc
Confidence 9997 346899999999999999999999999999999999999999999988643 127789887776654
Q ss_pred --hcCCCccccccccCCCCCC--CCCCCCCCCCCchhHHHhhcCcHHHHHhhccCCCCCcccccccChhh-hhh-cccCC
Q 044068 303 --SMGNINILDIYAPLCSSSF--STSSVLPFDPCSEIYVHSYLNSPQVQKSLHANVTGIRGPWQDCSDTV-LRH-WKDSP 376 (481)
Q Consensus 303 --~~g~~n~ydi~~~~c~~~~--~~~~~~~~~~c~~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v-~~~-~~d~~ 376 (481)
..+++|+||++.+ |.... ........+++....+..|||+++||+||||+... ..+|..|+..| +.. ..|.+
T Consensus 239 ~~~~~~~n~Ydi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~-~~~w~~~~~~V~~~~~~~d~~ 316 (415)
T PF00450_consen 239 SQCNGGINPYDIRQP-CYNPSRSSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDS-NVNWQSCNDAVNFNWLYDDFM 316 (415)
T ss_dssp HHHHTTSETTSTTSE-ETT-SHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTT-SSS--SB-HHHHHHCCTCCC-
T ss_pred ccccCCcceeeeecc-ccccccccccccccccccchhhHHHHhccHHHHHhhCCCccc-CCcccccCccccccccccccc
Confidence 3479999999996 52100 00001112334456889999999999999997211 35899999988 433 33788
Q ss_pred CCcHHHHHHHHhcCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeee--cCeeceEEEeecceEEEEEcCCCcc
Q 044068 377 LTVLPSIQELMTSGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYI--QGEVGGYVVGYQNLTFVAIRGAGHM 454 (481)
Q Consensus 377 ~~~~~~l~~Ll~~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~--~~~~aG~~k~~~nltf~~V~~AGHm 454 (481)
.++.+.+++||++++|||||+||+|++||+.|+++|+++|+|+++++|++|.. +++++||+|+++||||++|+|||||
T Consensus 317 ~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHm 396 (415)
T PF00450_consen 317 PSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHM 396 (415)
T ss_dssp SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SS
T ss_pred ccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCccc
Confidence 99999999999999999999999999999999999999999999999999987 8999999999999999999999999
Q ss_pred CCccChHHHHHHHHHHHcC
Q 044068 455 VPSSQPARALAFFSSFLDG 473 (481)
Q Consensus 455 vP~dqP~~al~mi~~fl~~ 473 (481)
||+|||++|++||++||+|
T Consensus 397 vP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 397 VPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp HHHHSHHHHHHHHHHHHCT
T ss_pred ChhhCHHHHHHHHHHHhcC
Confidence 9999999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=2.6e-95 Score=765.98 Aligned_cols=380 Identities=31% Similarity=0.577 Sum_probs=335.5
Q ss_pred CCCCceeEEeEEEecC-CCCceeEEEEEEe-CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcc
Q 044068 79 YGVEIDQYSGYVTVDP-KAGRALFYYFVES-QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWN 156 (481)
Q Consensus 79 ~~~~~~~ysGyl~v~~-~~~~~lFywffes-~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~ 156 (481)
|+.++++|||||+|++ ..+++|||||||| ++|+++||||||||||||||| +|+|.|||||+++.++.++..|++||+
T Consensus 41 ~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~ 119 (462)
T PTZ00472 41 CDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWN 119 (462)
T ss_pred cCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCcccc
Confidence 5677999999999975 4578999999999 889999999999999999999 799999999999998778999999999
Q ss_pred cccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhcc
Q 044068 157 NVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNK 236 (481)
Q Consensus 157 ~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 236 (481)
+.+||||||||+||||||++.. ++. .+++++|+|+++||+.||++||++++++|||+||||||+|+|.+|.+|+++|+
T Consensus 120 ~~~~~l~iDqP~G~G~S~~~~~-~~~-~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~ 197 (462)
T PTZ00472 120 NEAYVIYVDQPAGVGFSYADKA-DYD-HNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNK 197 (462)
T ss_pred cccCeEEEeCCCCcCcccCCCC-CCC-CChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhcc
Confidence 9999999999999999998654 344 37899999999999999999999999999999999999999999999999987
Q ss_pred --CCceecceeeeecCcccCcccccchhhhhhhh-------cccCCHHHHHhhhh----------cccCCc--ChHHHHH
Q 044068 237 --NQTFINLKGLAMGDAWIDTETGNKGMFDFYWT-------HALISDEVIHGINS----------NCNFTK--FSKACAS 295 (481)
Q Consensus 237 --~~~~inLkGi~IGNg~~dp~~q~~~~~~~~~~-------~gli~~~~~~~~~~----------~c~~~~--~~~~C~~ 295 (481)
.+.+||||||+||||++||..|..++.+|+|. +|+|++++++++.+ .|.... ....|..
T Consensus 198 ~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~ 277 (462)
T PTZ00472 198 KGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSV 277 (462)
T ss_pred ccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHH
Confidence 34689999999999999999999999999996 58999999988754 244321 1334544
Q ss_pred HHHHHHH-----hcCCCccccccccCCCCCCCCCCCCCCCCCch-hHHHhhcCcHHHHHhhccCCCCCcccccccChhhh
Q 044068 296 YLIKAYE-----SMGNINILDIYAPLCSSSFSTSSVLPFDPCSE-IYVHSYLNSPQVQKSLHANVTGIRGPWQDCSDTVL 369 (481)
Q Consensus 296 ~~~~~~~-----~~g~~n~ydi~~~~c~~~~~~~~~~~~~~c~~-~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~ 369 (481)
+...|.. ..+++|+||+|.+ |.. ++|++ ..+..|||+++||+||||+. ..|..|+..|+
T Consensus 278 a~~~c~~~~~~~~~~g~n~Ydi~~~-c~~----------~~c~~~~~~~~yLN~~~Vq~AL~v~~----~~w~~c~~~V~ 342 (462)
T PTZ00472 278 ARALCNEYIAVYSATGLNNYDIRKP-CIG----------PLCYNMDNTIAFMNREDVQSSLGVKP----ATWQSCNMEVN 342 (462)
T ss_pred HHHHHHHHHHHHHhcCCChhheecc-CCC----------CCccCHHHHHHHhCCHHHHHHhCCCC----CCceeCCHHHH
Confidence 4333221 1367999999985 742 46765 47899999999999999973 38999999998
Q ss_pred hhcc-cCCCCcHHHHHHHHhcCceEEEEeCCCCccccchhHHHHHHhcCcCccc-----ceeee-eecCeeceEEEeec-
Q 044068 370 RHWK-DSPLTVLPSIQELMTSGISVYIYSGDTDGMVPTISTRYSINKLEAKVKT-----AWYPW-YIQGEVGGYVVGYQ- 441 (481)
Q Consensus 370 ~~~~-d~~~~~~~~l~~Ll~~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~-----~~~~w-~~~~~~aG~~k~~~- 441 (481)
..+. |.+.++.+.++.||++|+|||||+||.|++||+.|+++|+++|+|++++ +|++| +++++++||+|+++
T Consensus 343 ~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~ 422 (462)
T PTZ00472 343 LMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAAS 422 (462)
T ss_pred HHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEec
Confidence 7776 7888899999999999999999999999999999999999999999975 56899 56899999999999
Q ss_pred ----ceEEEEEcCCCccCCccChHHHHHHHHHHHcCCCC
Q 044068 442 ----NLTFVAIRGAGHMVPSSQPARALAFFSSFLDGKLP 476 (481)
Q Consensus 442 ----nltf~~V~~AGHmvP~dqP~~al~mi~~fl~~~~~ 476 (481)
||+|++|++||||||+|||+++++||++|+.|+++
T Consensus 423 ~~~~~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 423 NTSSGFSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPL 461 (462)
T ss_pred ccCCCeEEEEECCCCccChhhHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999876
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=3.9e-74 Score=580.38 Aligned_cols=307 Identities=29% Similarity=0.541 Sum_probs=263.9
Q ss_pred ccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhcc-
Q 044068 158 VANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNK- 236 (481)
Q Consensus 158 ~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~- 236 (481)
.|||||||||+||||||+++..++. +++++|+|++.||++||++||+|+++||||+||||||||||++|.+|+++|+
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~--~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 4899999999999999987655443 6667779999999999999999999999999999999999999999999886
Q ss_pred -CCceecceeeeecCcccCcccccchhhhhhhhcccCCHHHHHhhhhcccCCc-----ChHHHHHHHHHHHHhcCCCccc
Q 044068 237 -NQTFINLKGLAMGDAWIDTETGNKGMFDFYWTHALISDEVIHGINSNCNFTK-----FSKACASYLIKAYESMGNINIL 310 (481)
Q Consensus 237 -~~~~inLkGi~IGNg~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~c~~~~-----~~~~C~~~~~~~~~~~g~~n~y 310 (481)
...+||||||+|||||++|..|..++.+|+|.+|+|++++++.+.+.|.... ....|.++........+.+|+|
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 158 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIH 158 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHh
Confidence 4568999999999999999999999999999999999999999999997421 2568998888777777889999
Q ss_pred cccccCCCCCCCCCCCCCCCCCch---hHHHhhcCcHHHHHhhccCCCCCcccccccChhhhhhcc-cCCCCcHHHHHHH
Q 044068 311 DIYAPLCSSSFSTSSVLPFDPCSE---IYVHSYLNSPQVQKSLHANVTGIRGPWQDCSDTVLRHWK-DSPLTVLPSIQEL 386 (481)
Q Consensus 311 di~~~~c~~~~~~~~~~~~~~c~~---~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~~~~~-d~~~~~~~~l~~L 386 (481)
+++.+.|.... . ..+.|.. ..+..|||+++||+||||+... ...|..|+..+. +. |.. +..+.+.++
T Consensus 159 ~~~~~~~~~~~-~----~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~~~v~--~~~d~~-~~~~~~~~~ 229 (319)
T PLN02213 159 HILTPDCDVTN-V----TSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNRTIP--YNHDIV-SSIPYHMNN 229 (319)
T ss_pred hcccCcccCcc-C----CCCCcccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCCcccc--cccccc-cchHHHHHH
Confidence 99865563211 0 1135653 3689999999999999997421 247999999885 43 443 445555556
Q ss_pred HhcCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecc-eEEEEEcCCCccCCccChHHHHH
Q 044068 387 MTSGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQN-LTFVAIRGAGHMVPSSQPARALA 465 (481)
Q Consensus 387 l~~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~n-ltf~~V~~AGHmvP~dqP~~al~ 465 (481)
+.+|+|||||+||.|++||+.|+++|+++|+|+++++|+||+++++++||+|+|+| |||++|+||||||| +||++|++
T Consensus 230 l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~ 308 (319)
T PLN02213 230 SISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFI 308 (319)
T ss_pred HhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHH
Confidence 66789999999999999999999999999999999999999999999999999986 99999999999998 69999999
Q ss_pred HHHHHHcCCCC
Q 044068 466 FFSSFLDGKLP 476 (481)
Q Consensus 466 mi~~fl~~~~~ 476 (481)
||++||.++++
T Consensus 309 m~~~fi~~~~~ 319 (319)
T PLN02213 309 MFQRWISGQPL 319 (319)
T ss_pred HHHHHHcCCCC
Confidence 99999999864
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-67 Score=538.18 Aligned_cols=376 Identities=28% Similarity=0.477 Sum_probs=312.1
Q ss_pred CCceeEEeEEEecCCCCceeEEEEEEe-CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccc--cCCcCccc
Q 044068 81 VEIDQYSGYVTVDPKAGRALFYYFVES-QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLS--HNEYAWNN 157 (481)
Q Consensus 81 ~~~~~ysGyl~v~~~~~~~lFywffes-~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~--~n~~sW~~ 157 (481)
.++++|+||.+.. ..+|||+||+ ++|+++|+|+||||||||||+ +|+|.|+||++|+.+. +.. .||+||+.
T Consensus 72 lpv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~-~P~~~~NP~SW~~ 145 (498)
T COG2939 72 LPVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGT-SPSYPDNPGSWLD 145 (498)
T ss_pred cchhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCC-CCCCCCCcccccc
Confidence 3478888884443 2399999999 899999999999999999999 7999999999999983 233 59999999
Q ss_pred ccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCC--CEEEEcccccccccHHHHHHHHHhc
Q 044068 158 VANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSR--AFFLAGESYAGHYIPQVALTILQFN 235 (481)
Q Consensus 158 ~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~--~~yi~GESYgG~yvP~lA~~i~~~n 235 (481)
++||||||||+|||||++... +.. .+...+.+|++.|++.||+.||+|.+. ++||+||||||+|+|.||+.|+++|
T Consensus 146 ~adLvFiDqPvGTGfS~a~~~-e~~-~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~ 223 (498)
T COG2939 146 FADLVFIDQPVGTGFSRALGD-EKK-KDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDN 223 (498)
T ss_pred CCceEEEecCcccCccccccc-ccc-cchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhc
Confidence 999999999999999997322 222 367789999999999999999999888 9999999999999999999999986
Q ss_pred c-CCceecceeeeecCc-ccCcccccchhhhhhhhcc----cCCHHHHHhhhhcccCCc------------ChHHHHHHH
Q 044068 236 K-NQTFINLKGLAMGDA-WIDTETGNKGMFDFYWTHA----LISDEVIHGINSNCNFTK------------FSKACASYL 297 (481)
Q Consensus 236 ~-~~~~inLkGi~IGNg-~~dp~~q~~~~~~~~~~~g----li~~~~~~~~~~~c~~~~------------~~~~C~~~~ 297 (481)
. .+..+||++++|||| ++||..|+..|..++...+ ..+.+.++++.+.|.... ....|..+.
T Consensus 224 ~~~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~ 303 (498)
T COG2939 224 IALNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENAS 303 (498)
T ss_pred cccCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHH
Confidence 5 455799999999999 9999999999999998644 556677888877665321 145677666
Q ss_pred HHHHHhc------CC---CccccccccCCCCCCCCCCCCCCCCCchh--HHHhhcCcHHHHHhhccCCCCCcccccccCh
Q 044068 298 IKAYESM------GN---INILDIYAPLCSSSFSTSSVLPFDPCSEI--YVHSYLNSPQVQKSLHANVTGIRGPWQDCSD 366 (481)
Q Consensus 298 ~~~~~~~------g~---~n~ydi~~~~c~~~~~~~~~~~~~~c~~~--~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~ 366 (481)
..+.... .+ .|.|+++. .|.... ....|++. ....|++...+++.+....+ .|..|+.
T Consensus 304 ~~~~~~~~~~~~r~~~~~~n~y~~r~-~~~d~g------~~~~~y~~~~~~ld~~~~~~~~~~~~~~~d----~~~~c~t 372 (498)
T COG2939 304 AYLTGLMREYVGRAGGRLLNVYDIRE-ECRDPG------LGGSCYDTLSTSLDYFNFDPEQEVNDPEVD----NISGCTT 372 (498)
T ss_pred HHHHhcchhhhccccccccccccchh-hcCCCC------cccccccceeeccccccccchhcccccccc----chhccch
Confidence 5554322 23 89999988 475421 11356653 57789998889998887653 7999999
Q ss_pred hhhhhc----ccCCCCcHHHHHHHHhcCceEEEEeCCCCccccchhHHHHHHhcCcCccccee-----eeee--cCeece
Q 044068 367 TVLRHW----KDSPLTVLPSIQELMTSGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWY-----PWYI--QGEVGG 435 (481)
Q Consensus 367 ~v~~~~----~d~~~~~~~~l~~Ll~~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~-----~w~~--~~~~aG 435 (481)
++...| .+.+.+....+..++.+++.+++|.|+.|.+|++.+++.|..+|+|.++..|. +|.. ..+..|
T Consensus 373 ~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~ 452 (498)
T COG2939 373 DAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMG 452 (498)
T ss_pred HHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcc
Confidence 987777 26778888889999999999999999999999999999999999999988553 4433 567788
Q ss_pred EEEeecceEEEEEcCCCccCCccChHHHHHHHHHHHcCCC
Q 044068 436 YVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSSFLDGKL 475 (481)
Q Consensus 436 ~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~fl~~~~ 475 (481)
-+++++|++|+.++.||||||+|+|+.+++|++.|+.+..
T Consensus 453 ~~~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~~ 492 (498)
T COG2939 453 GYKSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWINGYG 492 (498)
T ss_pred cccccCCceEEEEecCcceeecCChHHHHHHHHHHHhhcc
Confidence 8888999999999999999999999999999999998743
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.7e-66 Score=494.16 Aligned_cols=376 Identities=29% Similarity=0.473 Sum_probs=312.1
Q ss_pred EEeEEEecCCCCceeEEEEEEe--CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEE
Q 044068 86 YSGYVTVDPKAGRALFYYFVES--QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLF 163 (481)
Q Consensus 86 ysGyl~v~~~~~~~lFywffes--~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvly 163 (481)
-.||++|. .+++||+|.+.+ +.....|+.|||+||||.||.|+|+|.|+||...+ +++|+.+|.|.|+|+|
T Consensus 4 ~wg~v~vr--~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adllf 76 (414)
T KOG1283|consen 4 DWGYVDVR--TGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLLF 76 (414)
T ss_pred cccceeee--cCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEEE
Confidence 36999996 469999999988 44578999999999999999999999999999875 5689999999999999
Q ss_pred EecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhcc-CCceec
Q 044068 164 LESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNK-NQTFIN 242 (481)
Q Consensus 164 iDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~-~~~~in 242 (481)
||+|||+||||.+..+.|.+ +++++|.|+.+.|+.||..||||+.+||||+-|||||+..+.+|..+.+..+ +..+.|
T Consensus 77 vDnPVGaGfSyVdg~~~Y~~-~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~n 155 (414)
T KOG1283|consen 77 VDNPVGAGFSYVDGSSAYTT-NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLN 155 (414)
T ss_pred ecCCCcCceeeecCcccccc-cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeec
Confidence 99999999999887766664 8999999999999999999999999999999999999999999999988877 678999
Q ss_pred ceeeeecCcccCcccccchhhhhhhhcccCCHHHHHhhhh---cccCCc------ChHHH-HHHHHHHHHhcCCCccccc
Q 044068 243 LKGLAMGDAWIDTETGNKGMFDFYWTHALISDEVIHGINS---NCNFTK------FSKAC-ASYLIKAYESMGNINILDI 312 (481)
Q Consensus 243 LkGi~IGNg~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~---~c~~~~------~~~~C-~~~~~~~~~~~g~~n~ydi 312 (481)
+.|+++|+.||+|+.-..+..+|++..+++++...+..++ .|...- ....| ...-+.+.....++|.|||
T Consensus 156 f~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYNi 235 (414)
T KOG1283|consen 156 FIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYNI 235 (414)
T ss_pred ceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceeee
Confidence 9999999999999999999999999999999888776644 232210 01122 1122233344567899999
Q ss_pred cccCCCCCCCC-------------CC-CCCCCCCchhHHHhhcCcHHHHHhhccCCCCCcccccccChhhhhhcc-cCCC
Q 044068 313 YAPLCSSSFST-------------SS-VLPFDPCSEIYVHSYLNSPQVQKSLHANVTGIRGPWQDCSDTVLRHWK-DSPL 377 (481)
Q Consensus 313 ~~~~c~~~~~~-------------~~-~~~~~~c~~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~~~~~-d~~~ 377 (481)
..+.-..+... |. .....+-..+.+.+++|-+ ||++|++.++. ..|-.-+.+++..++ |+|+
T Consensus 236 l~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~--~~wGgqsg~vFt~lq~dFMK 312 (414)
T KOG1283|consen 236 LTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGG--VKWGGQSGDVFTKLQGDFMK 312 (414)
T ss_pred eccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhccc-ccccccccCCC--CcccCcCCchHHHhhhhhcc
Confidence 87533222110 00 0000111124588888887 99999998763 589999988887776 9999
Q ss_pred CcHHHHHHHHhcCceEEEEeCCCCccccchhHHHHHHhcCcCccccee--ee---eecCeeceEEEeecceEEEEEcCCC
Q 044068 378 TVLPSIQELMTSGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWY--PW---YIQGEVGGYVVGYQNLTFVAIRGAG 452 (481)
Q Consensus 378 ~~~~~l~~Ll~~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~--~w---~~~~~~aG~~k~~~nltf~~V~~AG 452 (481)
++...+.+||++|++|.||+|++|.||++.|+++|+++|+|++...++ +| +++-..+||.|+|+||.|..|..||
T Consensus 313 Pvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~wilrag 392 (414)
T KOG1283|consen 313 PVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFFWILRAG 392 (414)
T ss_pred cHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeEEeeccc
Confidence 999999999999999999999999999999999999999999988553 44 3466889999999999999999999
Q ss_pred ccCCccChHHHHHHHHHHHc
Q 044068 453 HMVPSSQPARALAFFSSFLD 472 (481)
Q Consensus 453 HmvP~dqP~~al~mi~~fl~ 472 (481)
||||.|+|+.|.+|++.+.+
T Consensus 393 hmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 393 HMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred CcccCCCHHHHhhheeeccc
Confidence 99999999999999987653
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.46 E-value=4.4e-12 Score=121.68 Aligned_cols=116 Identities=20% Similarity=0.312 Sum_probs=79.5
Q ss_pred EEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCC
Q 044068 101 FYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSD 180 (481)
Q Consensus 101 Fywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~ 180 (481)
+|..+.. ..++.|+||+++|.+|++.. +..+.+ -+.+..+++.+| ..|.|.|.......
T Consensus 2 ~~~~~~~-~~~~~~~iv~lhG~~~~~~~-~~~~~~------------------~l~~~~~vi~~D-~~G~G~S~~~~~~~ 60 (257)
T TIGR03611 2 HYELHGP-PDADAPVVVLSSGLGGSGSY-WAPQLD------------------VLTQRFHVVTYD-HRGTGRSPGELPPG 60 (257)
T ss_pred EEEEecC-CCCCCCEEEEEcCCCcchhH-HHHHHH------------------HHHhccEEEEEc-CCCCCCCCCCCccc
Confidence 4444432 22467999999999877766 433221 123457999999 57999996433222
Q ss_pred CccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCc
Q 044068 181 YVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 181 ~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp 255 (481)
+ +.++.++++.+++.. +...+++|+|+|+||..+..+|.+..+ .++++++.+++..+
T Consensus 61 ~---~~~~~~~~~~~~i~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~--------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 61 Y---SIAHMADDVLQLLDA-------LNIERFHFVGHALGGLIGLQLALRYPE--------RLLSLVLINAWSRP 117 (257)
T ss_pred C---CHHHHHHHHHHHHHH-------hCCCcEEEEEechhHHHHHHHHHHChH--------HhHHheeecCCCCC
Confidence 2 566777777776653 234679999999999999999875532 38999988887654
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.44 E-value=1.2e-11 Score=120.34 Aligned_cols=130 Identities=24% Similarity=0.307 Sum_probs=82.4
Q ss_pred EEeEEEecCCCCceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEe
Q 044068 86 YSGYVTVDPKAGRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLE 165 (481)
Q Consensus 86 ysGyl~v~~~~~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiD 165 (481)
..++++++ +..+.|.-+. .+...|.||+++||||+++..+..+.+ .+. .+..+++.+|
T Consensus 3 ~~~~~~~~---~~~~~~~~~~--~~~~~~~vl~~hG~~g~~~~~~~~~~~-----------~l~------~~g~~vi~~d 60 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTG--GEGEKIKLLLLHGGPGMSHEYLENLRE-----------LLK------EEGREVIMYD 60 (288)
T ss_pred ccceecCC---CCeEEEEecc--CCCCCCeEEEEcCCCCccHHHHHHHHH-----------HHH------hcCCEEEEEc
Confidence 45666664 2334443332 223468899999999998752222221 011 1248899999
Q ss_pred cCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceeccee
Q 044068 166 SPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKG 245 (481)
Q Consensus 166 qPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkG 245 (481)
. +|.|.|......... .+.++.++++..++. ++..++++|.|+|+||..+..+|.+. +..+++
T Consensus 61 ~-~G~G~s~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~liG~S~Gg~ia~~~a~~~--------p~~v~~ 123 (288)
T TIGR01250 61 Q-LGCGYSDQPDDSDEL-WTIDYFVDELEEVRE-------KLGLDKFYLLGHSWGGMLAQEYALKY--------GQHLKG 123 (288)
T ss_pred C-CCCCCCCCCCccccc-ccHHHHHHHHHHHHH-------HcCCCcEEEEEeehHHHHHHHHHHhC--------ccccce
Confidence 5 699998643222100 255667777666554 23346799999999999999988754 345889
Q ss_pred eeecCcccC
Q 044068 246 LAMGDAWID 254 (481)
Q Consensus 246 i~IGNg~~d 254 (481)
+++.++...
T Consensus 124 lvl~~~~~~ 132 (288)
T TIGR01250 124 LIISSMLDS 132 (288)
T ss_pred eeEeccccc
Confidence 998887654
No 11
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.39 E-value=1.7e-11 Score=118.87 Aligned_cols=104 Identities=15% Similarity=0.147 Sum_probs=77.0
Q ss_pred CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCch
Q 044068 108 QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDE 187 (481)
Q Consensus 108 ~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~ 187 (481)
+++.++|.||+++|.+|.+.. +..+.+ .+.+..+++.+|. .|.|.|... .. .+.+
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~~------------------~l~~~~~vi~~D~-~G~G~s~~~--~~---~~~~ 65 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLAR------------------DLVNDHDIIQVDM-RNHGLSPRD--PV---MNYP 65 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHHH------------------HHhhCCeEEEECC-CCCCCCCCC--CC---CCHH
Confidence 456788999999999988876 544432 1234679999995 799998642 22 2567
Q ss_pred hhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCc
Q 044068 188 RTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDA 251 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg 251 (481)
+.++|+.++|.. +..++++|.|+|+||..+..+|.+..+ .++++++.++
T Consensus 66 ~~~~d~~~~l~~-------l~~~~~~lvGhS~Gg~va~~~a~~~~~--------~v~~lvli~~ 114 (255)
T PRK10673 66 AMAQDLLDTLDA-------LQIEKATFIGHSMGGKAVMALTALAPD--------RIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHH-------cCCCceEEEEECHHHHHHHHHHHhCHh--------hcceEEEEec
Confidence 788898888864 234579999999999999999876433 3888888764
No 12
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.39 E-value=9.2e-11 Score=117.46 Aligned_cols=140 Identities=21% Similarity=0.268 Sum_probs=90.2
Q ss_pred cCccccCCCCCCCCCceeEEeEEEecCCCC--ceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCC
Q 044068 68 ADKIEKLPGQPYGVEIDQYSGYVTVDPKAG--RALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDG 145 (481)
Q Consensus 68 ~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~--~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~ 145 (481)
+.++.+||.+|. .-.|+.|+...+ .+++|.- ..++ +.|.||.++|.|+.+.. +..+. |
T Consensus 8 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~y~~--~G~~-~~~~lvliHG~~~~~~~-w~~~~---~------- 67 (302)
T PRK00870 8 DSRFENLPDYPF------APHYVDVDDGDGGPLRMHYVD--EGPA-DGPPVLLLHGEPSWSYL-YRKMI---P------- 67 (302)
T ss_pred cccccCCcCCCC------CceeEeecCCCCceEEEEEEe--cCCC-CCCEEEEECCCCCchhh-HHHHH---H-------
Confidence 356778886653 346788875333 3566553 3333 46889999999877766 43322 1
Q ss_pred CccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccH
Q 044068 146 KSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIP 225 (481)
Q Consensus 146 ~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP 225 (481)
.|. .+..+++.+| .+|.|.|-...... ..+.++.++++.++|+ ++...+++|.|||+||..+-
T Consensus 68 -~L~------~~gy~vi~~D-l~G~G~S~~~~~~~--~~~~~~~a~~l~~~l~-------~l~~~~v~lvGhS~Gg~ia~ 130 (302)
T PRK00870 68 -ILA------AAGHRVIAPD-LIGFGRSDKPTRRE--DYTYARHVEWMRSWFE-------QLDLTDVTLVCQDWGGLIGL 130 (302)
T ss_pred -HHH------hCCCEEEEEC-CCCCCCCCCCCCcc--cCCHHHHHHHHHHHHH-------HcCCCCEEEEEEChHHHHHH
Confidence 111 1348999999 58999984321111 1255666777666654 23456899999999999998
Q ss_pred HHHHHHHHhccCCceecceeeeecCcc
Q 044068 226 QVALTILQFNKNQTFINLKGLAMGDAW 252 (481)
Q Consensus 226 ~lA~~i~~~n~~~~~inLkGi~IGNg~ 252 (481)
.+|.+.- -.++++++.++.
T Consensus 131 ~~a~~~p--------~~v~~lvl~~~~ 149 (302)
T PRK00870 131 RLAAEHP--------DRFARLVVANTG 149 (302)
T ss_pred HHHHhCh--------hheeEEEEeCCC
Confidence 8887542 238888888764
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=99.34 E-value=8.7e-11 Score=115.75 Aligned_cols=125 Identities=12% Similarity=0.101 Sum_probs=84.0
Q ss_pred CCceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCccc-ccceEEEecCCCCCCCC
Q 044068 96 AGRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNN-VANMLFLESPAGVGFSY 174 (481)
Q Consensus 96 ~~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~-~anvlyiDqPvG~GfSy 174 (481)
.|..|+|.+++.. +..+|+||.+||.+++|.. +-.+.+ .+.+ -..++-+| .+|.|.|-
T Consensus 9 ~g~~l~~~~~~~~-~~~~~~v~llHG~~~~~~~-~~~~~~------------------~l~~~g~~via~D-~~G~G~S~ 67 (276)
T PHA02857 9 DNDYIYCKYWKPI-TYPKALVFISHGAGEHSGR-YEELAE------------------NISSLGILVFSHD-HIGHGRSN 67 (276)
T ss_pred CCCEEEEEeccCC-CCCCEEEEEeCCCccccch-HHHHHH------------------HHHhCCCEEEEcc-CCCCCCCC
Confidence 4678999888773 2345899999999776665 422221 1333 37899999 69999995
Q ss_pred CCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccC
Q 044068 175 SNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWID 254 (481)
Q Consensus 175 ~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~d 254 (481)
..... . .+-....+|+.+++..+-+.+ ...+++|.|+|+||..+..+|.+. +-+++|+++.+|.++
T Consensus 68 ~~~~~-~--~~~~~~~~d~~~~l~~~~~~~---~~~~~~lvG~S~GG~ia~~~a~~~--------p~~i~~lil~~p~~~ 133 (276)
T PHA02857 68 GEKMM-I--DDFGVYVRDVVQHVVTIKSTY---PGVPVFLLGHSMGATISILAAYKN--------PNLFTAMILMSPLVN 133 (276)
T ss_pred CccCC-c--CCHHHHHHHHHHHHHHHHhhC---CCCCEEEEEcCchHHHHHHHHHhC--------ccccceEEEeccccc
Confidence 43211 1 133445677777665544433 357899999999998777766532 335899999998776
Q ss_pred c
Q 044068 255 T 255 (481)
Q Consensus 255 p 255 (481)
+
T Consensus 134 ~ 134 (276)
T PHA02857 134 A 134 (276)
T ss_pred c
Confidence 3
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.34 E-value=8.4e-11 Score=114.88 Aligned_cols=109 Identities=16% Similarity=0.074 Sum_probs=75.5
Q ss_pred CCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhh
Q 044068 110 SSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERT 189 (481)
Q Consensus 110 p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~ 189 (481)
+.+.|+||+++|.+|.+.. +..+.+ .+ .+..+++.+| ..|.|.|....... .+.+..
T Consensus 25 ~~~~~~vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~D-~~G~G~S~~~~~~~---~~~~~~ 81 (278)
T TIGR03056 25 PTAGPLLLLLHGTGASTHS-WRDLMP-----------PL-------ARSFRVVAPD-LPGHGFTRAPFRFR---FTLPSM 81 (278)
T ss_pred CCCCCeEEEEcCCCCCHHH-HHHHHH-----------HH-------hhCcEEEeec-CCCCCCCCCccccC---CCHHHH
Confidence 3456899999999877666 433321 11 2347899999 58999986433212 256777
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 190 AADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 190 A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
++++.+++++ +..++++|+|+|+||..+..+|.+. +..++++++.++..++.
T Consensus 82 ~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~--------p~~v~~~v~~~~~~~~~ 133 (278)
T TIGR03056 82 AEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDG--------PVTPRMVVGINAALMPF 133 (278)
T ss_pred HHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhC--------CcccceEEEEcCccccc
Confidence 8887776653 2346899999999999888777644 34478999988876643
No 15
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.33 E-value=9.7e-11 Score=116.67 Aligned_cols=123 Identities=13% Similarity=0.107 Sum_probs=83.6
Q ss_pred EEEecCCCCceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCC
Q 044068 89 YVTVDPKAGRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPA 168 (481)
Q Consensus 89 yl~v~~~~~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPv 168 (481)
|++++ +.+++|.- ..+ ..|.||+|||.+++|.+ +..+.+ .+.+.++++.+| .+
T Consensus 12 ~~~~~---~~~i~y~~--~G~--~~~~vlllHG~~~~~~~-w~~~~~------------------~L~~~~~vi~~D-lp 64 (294)
T PLN02824 12 TWRWK---GYNIRYQR--AGT--SGPALVLVHGFGGNADH-WRKNTP------------------VLAKSHRVYAID-LL 64 (294)
T ss_pred eEEEc---CeEEEEEE--cCC--CCCeEEEECCCCCChhH-HHHHHH------------------HHHhCCeEEEEc-CC
Confidence 56663 34555433 221 23789999999998887 544432 123457999999 69
Q ss_pred CCCCCCCCCCCCC---ccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceeccee
Q 044068 169 GVGFSYSNTSSDY---VMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKG 245 (481)
Q Consensus 169 G~GfSy~~~~~~~---~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkG 245 (481)
|.|.|........ ...+.++.|+++.++|.+. ..++++|.|+|.||..+-.+|.+.. -.+++
T Consensus 65 G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p--------~~v~~ 129 (294)
T PLN02824 65 GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAP--------ELVRG 129 (294)
T ss_pred CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhCh--------hheeE
Confidence 9999964322110 0125667788877777633 3578999999999999988887653 34899
Q ss_pred eeecCccc
Q 044068 246 LAMGDAWI 253 (481)
Q Consensus 246 i~IGNg~~ 253 (481)
+++.|+..
T Consensus 130 lili~~~~ 137 (294)
T PLN02824 130 VMLINISL 137 (294)
T ss_pred EEEECCCc
Confidence 99998765
No 16
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.26 E-value=4.7e-10 Score=110.46 Aligned_cols=60 Identities=13% Similarity=0.127 Sum_probs=53.1
Q ss_pred cCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHH
Q 044068 389 SGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFS 468 (481)
Q Consensus 389 ~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~ 468 (481)
-.+|||++.|+.|.+++....+.+.+.+. +.+++.|++|||+++.++|+...++|.
T Consensus 222 i~~Pvlli~G~~D~~v~~~~~~~~~~~~~------------------------~~~~~~i~~agH~~~~e~p~~~~~~i~ 277 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLDHGLKLLWNMP------------------------DAQLHVFSRCGHWAQWEHADAFNRLVI 277 (282)
T ss_pred CCCCEEEEEccCCCcCCchhHHHHHHhCC------------------------CCEEEEeCCCCcCCcccCHHHHHHHHH
Confidence 36899999999999999887777766654 568899999999999999999999999
Q ss_pred HHHc
Q 044068 469 SFLD 472 (481)
Q Consensus 469 ~fl~ 472 (481)
+|+.
T Consensus 278 ~fl~ 281 (282)
T TIGR03343 278 DFLR 281 (282)
T ss_pred HHhh
Confidence 9985
No 17
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.23 E-value=2.7e-10 Score=113.47 Aligned_cols=121 Identities=17% Similarity=0.290 Sum_probs=75.0
Q ss_pred EeEEEecCCCCceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEec
Q 044068 87 SGYVTVDPKAGRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLES 166 (481)
Q Consensus 87 sGyl~v~~~~~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDq 166 (481)
+.+++++ +..++|- +.. ..|.||.|||.|..+.. +-.+.+ .+.+.++++.+|
T Consensus 16 ~~~~~~~---~~~i~y~--~~G---~~~~iv~lHG~~~~~~~-~~~~~~------------------~l~~~~~vi~~D- 67 (286)
T PRK03204 16 SRWFDSS---RGRIHYI--DEG---TGPPILLCHGNPTWSFL-YRDIIV------------------ALRDRFRCVAPD- 67 (286)
T ss_pred ceEEEcC---CcEEEEE--ECC---CCCEEEEECCCCccHHH-HHHHHH------------------HHhCCcEEEEEC-
Confidence 4567774 3455543 222 24789999999854444 322210 123458999999
Q ss_pred CCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceee
Q 044068 167 PAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGL 246 (481)
Q Consensus 167 PvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi 246 (481)
.+|.|.|-.....+ .+.++.++++.++++. +...+++|+|+|+||..+-.+|.+- +..++++
T Consensus 68 ~~G~G~S~~~~~~~---~~~~~~~~~~~~~~~~-------~~~~~~~lvG~S~Gg~va~~~a~~~--------p~~v~~l 129 (286)
T PRK03204 68 YLGFGLSERPSGFG---YQIDEHARVIGEFVDH-------LGLDRYLSMGQDWGGPISMAVAVER--------ADRVRGV 129 (286)
T ss_pred CCCCCCCCCCCccc---cCHHHHHHHHHHHHHH-------hCCCCEEEEEECccHHHHHHHHHhC--------hhheeEE
Confidence 57999984322111 1445566666555542 2346899999999998766665433 3458999
Q ss_pred eecCccc
Q 044068 247 AMGDAWI 253 (481)
Q Consensus 247 ~IGNg~~ 253 (481)
+++++..
T Consensus 130 vl~~~~~ 136 (286)
T PRK03204 130 VLGNTWF 136 (286)
T ss_pred EEECccc
Confidence 9988754
No 18
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.23 E-value=9.9e-10 Score=113.20 Aligned_cols=127 Identities=17% Similarity=0.074 Sum_probs=79.2
Q ss_pred EeEEEecCCCCc-eeEEEEEEeC-CCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEE
Q 044068 87 SGYVTVDPKAGR-ALFYYFVESQ-NSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFL 164 (481)
Q Consensus 87 sGyl~v~~~~~~-~lFywffes~-~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyi 164 (481)
..|+..+ +. +++|.-..+. ...+.|.||.|||.++.+.. +..+.+ ...+...++.+
T Consensus 63 ~~~~~~~---g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~-w~~~~~------------------~L~~~~~via~ 120 (360)
T PLN02679 63 CKKWKWK---GEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPH-WRRNIG------------------VLAKNYTVYAI 120 (360)
T ss_pred CceEEEC---CceeEEEEEecCcccCCCCCeEEEECCCCCCHHH-HHHHHH------------------HHhcCCEEEEE
Confidence 4455553 23 5665533221 11245789999999888776 533321 12345789999
Q ss_pred ecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecce
Q 044068 165 ESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLK 244 (481)
Q Consensus 165 DqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLk 244 (481)
| ..|.|.|-...... .+.++.++++.++|.. +...+++|.|+|+||..+-.+|.+-. +-.++
T Consensus 121 D-l~G~G~S~~~~~~~---~~~~~~a~~l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~~-------P~rV~ 182 (360)
T PLN02679 121 D-LLGFGASDKPPGFS---YTMETWAELILDFLEE-------VVQKPTVLIGNSVGSLACVIAASEST-------RDLVR 182 (360)
T ss_pred C-CCCCCCCCCCCCcc---ccHHHHHHHHHHHHHH-------hcCCCeEEEEECHHHHHHHHHHHhcC-------hhhcC
Confidence 9 58999985322222 2556778887777763 23468999999999976655553211 23489
Q ss_pred eeeecCccc
Q 044068 245 GLAMGDAWI 253 (481)
Q Consensus 245 Gi~IGNg~~ 253 (481)
|+++.|+..
T Consensus 183 ~LVLi~~~~ 191 (360)
T PLN02679 183 GLVLLNCAG 191 (360)
T ss_pred EEEEECCcc
Confidence 999888653
No 19
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.22 E-value=7.7e-10 Score=112.27 Aligned_cols=137 Identities=19% Similarity=0.190 Sum_probs=87.4
Q ss_pred EEeEEEecCCCCceeEEEEEEe-CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCccc-ccceEE
Q 044068 86 YSGYVTVDPKAGRALFYYFVES-QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNN-VANMLF 163 (481)
Q Consensus 86 ysGyl~v~~~~~~~lFywffes-~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~-~anvly 163 (481)
..++++.. .+..++|+.+.. ......|+||++||..+.++..+-.+ -..+.+ -.+|+.
T Consensus 33 ~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~------------------~~~L~~~Gy~V~~ 92 (330)
T PLN02298 33 SKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQST------------------AIFLAQMGFACFA 92 (330)
T ss_pred ccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHH------------------HHHHHhCCCEEEE
Confidence 46677664 367899866543 22235689999999854332111000 011333 489999
Q ss_pred EecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecc
Q 044068 164 LESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINL 243 (481)
Q Consensus 164 iDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inL 243 (481)
+|+ .|.|.|-... .+. .+.+..++|+..+++..-. ..++...+++|.|+|+||..+..++.+- +-.+
T Consensus 93 ~D~-rGhG~S~~~~--~~~-~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~~--------p~~v 159 (330)
T PLN02298 93 LDL-EGHGRSEGLR--AYV-PNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLAN--------PEGF 159 (330)
T ss_pred ecC-CCCCCCCCcc--ccC-CCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhcC--------cccc
Confidence 995 9999985322 221 1556788998888775433 2234456899999999998777666432 3359
Q ss_pred eeeeecCcccCc
Q 044068 244 KGLAMGDAWIDT 255 (481)
Q Consensus 244 kGi~IGNg~~dp 255 (481)
+|+++.+++.+.
T Consensus 160 ~~lvl~~~~~~~ 171 (330)
T PLN02298 160 DGAVLVAPMCKI 171 (330)
T ss_pred eeEEEecccccC
Confidence 999999887653
No 20
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.21 E-value=6.2e-10 Score=114.08 Aligned_cols=128 Identities=19% Similarity=0.216 Sum_probs=83.9
Q ss_pred CCceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCccc-ccceEEEecCCCCCCCC
Q 044068 96 AGRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNN-VANMLFLESPAGVGFSY 174 (481)
Q Consensus 96 ~~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~-~anvlyiDqPvG~GfSy 174 (481)
.|..+|+..+...+.+.+|+||++||..+.++..+-.+. -.+.+ -.+|+-+|. .|.|.|-
T Consensus 70 ~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~------------------~~l~~~g~~v~~~D~-~G~G~S~ 130 (349)
T PLN02385 70 RGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIA------------------RKIASSGYGVFAMDY-PGFGLSE 130 (349)
T ss_pred CCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHH------------------HHHHhCCCEEEEecC-CCCCCCC
Confidence 467888877654222456999999998665543111111 01232 478999996 7999986
Q ss_pred CCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccC
Q 044068 175 SNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWID 254 (481)
Q Consensus 175 ~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~d 254 (481)
... .+. .+.++.++|+.++++. +...+++...+++|.|+|+||..+..+|.+- +-.++|+++.++...
T Consensus 131 ~~~--~~~-~~~~~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~~--------p~~v~glVLi~p~~~ 198 (349)
T PLN02385 131 GLH--GYI-PSFDDLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLKQ--------PNAWDGAILVAPMCK 198 (349)
T ss_pred CCC--CCc-CCHHHHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHhC--------cchhhheeEeccccc
Confidence 432 221 1556778888877764 3333455566899999999998877776543 334899999987654
No 21
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.20 E-value=1.3e-10 Score=108.16 Aligned_cols=104 Identities=22% Similarity=0.208 Sum_probs=72.9
Q ss_pred EEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHH
Q 044068 116 VLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYT 195 (481)
Q Consensus 116 vlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~ 195 (481)
||.++|++|.+.. +..+.+ .+ .+..+++.+|. .|.|.|-.... +...+.++.++++.+
T Consensus 1 vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~-~G~G~s~~~~~--~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAE-----------AL-------ARGYRVIAFDL-PGHGRSDPPPD--YSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHH-----------HH-------HTTSEEEEEEC-TTSTTSSSHSS--GSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEec-CCccccccccc--cCCcchhhhhhhhhh
Confidence 7899999988876 544331 11 25778999995 79999975432 111255666777766
Q ss_pred HHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 196 FLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 196 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
+|+. +..++++|+|+|+||..+-.+|.+. +-.++|+++.++.....
T Consensus 59 ~l~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 59 LLDA-------LGIKKVILVGHSMGGMIALRLAARY--------PDRVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHH-------TTTSSEEEEEETHHHHHHHHHHHHS--------GGGEEEEEEESESSSHH
T ss_pred cccc-------ccccccccccccccccccccccccc--------ccccccceeeccccccc
Confidence 6652 2337899999999999999888764 23599999999888643
No 22
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.18 E-value=2.9e-10 Score=113.27 Aligned_cols=115 Identities=17% Similarity=0.197 Sum_probs=80.1
Q ss_pred CceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCC
Q 044068 97 GRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSN 176 (481)
Q Consensus 97 ~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~ 176 (481)
+.+++|.-. . +.|.||++||.|+.+.. +-.+.+ .+.+...++-+| .+|.|.|.-.
T Consensus 16 g~~i~y~~~--G---~g~~vvllHG~~~~~~~-w~~~~~------------------~L~~~~~via~D-~~G~G~S~~~ 70 (295)
T PRK03592 16 GSRMAYIET--G---EGDPIVFLHGNPTSSYL-WRNIIP------------------HLAGLGRCLAPD-LIGMGASDKP 70 (295)
T ss_pred CEEEEEEEe--C---CCCEEEEECCCCCCHHH-HHHHHH------------------HHhhCCEEEEEc-CCCCCCCCCC
Confidence 355665432 2 34789999999988877 533331 123345899999 5899999533
Q ss_pred CCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCc
Q 044068 177 TSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 177 ~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp 255 (481)
. .++ +.+..|+|+..+++. +...+++|.|+|.||.++-.+|.+.. -.++++++.|+...+
T Consensus 71 ~-~~~---~~~~~a~dl~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p--------~~v~~lil~~~~~~~ 130 (295)
T PRK03592 71 D-IDY---TFADHARYLDAWFDA-------LGLDDVVLVGHDWGSALGFDWAARHP--------DRVRGIAFMEAIVRP 130 (295)
T ss_pred C-CCC---CHHHHHHHHHHHHHH-------hCCCCeEEEEECHHHHHHHHHHHhCh--------hheeEEEEECCCCCC
Confidence 2 222 566778887776653 34468999999999998888887653 338999999986544
No 23
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.16 E-value=1.6e-09 Score=107.04 Aligned_cols=117 Identities=15% Similarity=0.078 Sum_probs=79.9
Q ss_pred CceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCC
Q 044068 97 GRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSN 176 (481)
Q Consensus 97 ~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~ 176 (481)
+..+.||..+. . ...|.||++||-++.+.. +..+.+ . ..+..+++.+| ..|.|.|-..
T Consensus 11 ~~~~~~~~~~~-~-~~~~plvllHG~~~~~~~-w~~~~~-----------~-------L~~~~~vi~~D-l~G~G~S~~~ 68 (276)
T TIGR02240 11 GQSIRTAVRPG-K-EGLTPLLIFNGIGANLEL-VFPFIE-----------A-------LDPDLEVIAFD-VPGVGGSSTP 68 (276)
T ss_pred CcEEEEEEecC-C-CCCCcEEEEeCCCcchHH-HHHHHH-----------H-------hccCceEEEEC-CCCCCCCCCC
Confidence 45678877543 2 345788999997666655 433321 1 12457999999 6999999532
Q ss_pred CCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccC
Q 044068 177 TSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWID 254 (481)
Q Consensus 177 ~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~d 254 (481)
..+ .+.+..++++.+++.. +.-++++|+|+|+||..+-.+|.+-.+ .++++++.|+...
T Consensus 69 -~~~---~~~~~~~~~~~~~i~~-------l~~~~~~LvG~S~GG~va~~~a~~~p~--------~v~~lvl~~~~~~ 127 (276)
T TIGR02240 69 -RHP---YRFPGLAKLAARMLDY-------LDYGQVNAIGVSWGGALAQQFAHDYPE--------RCKKLILAATAAG 127 (276)
T ss_pred -CCc---CcHHHHHHHHHHHHHH-------hCcCceEEEEECHHHHHHHHHHHHCHH--------HhhheEEeccCCc
Confidence 222 1556677777776654 234689999999999988888875433 4999999998764
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.16 E-value=1.7e-09 Score=102.62 Aligned_cols=59 Identities=31% Similarity=0.447 Sum_probs=51.9
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSS 469 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~ 469 (481)
.+||++.+|+.|.++|....+.+.+.+. +.++..+.++||+++.++|+...+.++.
T Consensus 193 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 248 (251)
T TIGR02427 193 AVPTLCIAGDQDGSTPPELVREIADLVP------------------------GARFAEIRGAGHIPCVEQPEAFNAALRD 248 (251)
T ss_pred CCCeEEEEeccCCcCChHHHHHHHHhCC------------------------CceEEEECCCCCcccccChHHHHHHHHH
Confidence 6999999999999999987777766643 4578999999999999999999999999
Q ss_pred HHc
Q 044068 470 FLD 472 (481)
Q Consensus 470 fl~ 472 (481)
|+.
T Consensus 249 fl~ 251 (251)
T TIGR02427 249 FLR 251 (251)
T ss_pred HhC
Confidence 974
No 25
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.15 E-value=1.7e-09 Score=105.23 Aligned_cols=60 Identities=17% Similarity=0.121 Sum_probs=51.8
Q ss_pred cCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHH
Q 044068 389 SGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFS 468 (481)
Q Consensus 389 ~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~ 468 (481)
-.+||||++|+.|.++|....+...+.+. |..++.++++||+++.++|+...+.+.
T Consensus 195 i~~P~lii~G~~D~~~~~~~~~~~~~~i~------------------------~~~~~~i~~~gH~~~~e~p~~f~~~l~ 250 (256)
T PRK10349 195 VSMPFLRLYGYLDGLVPRKVVPMLDKLWP------------------------HSESYIFAKAAHAPFISHPAEFCHLLV 250 (256)
T ss_pred cCCCeEEEecCCCccCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 36999999999999999887765555543 668899999999999999999999999
Q ss_pred HHHc
Q 044068 469 SFLD 472 (481)
Q Consensus 469 ~fl~ 472 (481)
+|-+
T Consensus 251 ~~~~ 254 (256)
T PRK10349 251 ALKQ 254 (256)
T ss_pred HHhc
Confidence 9864
No 26
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.10 E-value=7.2e-09 Score=107.51 Aligned_cols=133 Identities=15% Similarity=0.092 Sum_probs=84.7
Q ss_pred CceeEEeEEEecCCCCceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccce
Q 044068 82 EIDQYSGYVTVDPKAGRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANM 161 (481)
Q Consensus 82 ~~~~ysGyl~v~~~~~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anv 161 (481)
++++-+|+.... .+-.+||. +. .+...|.||.+||.|+.+.. +-.+.+ . ..+..+|
T Consensus 101 ~~~~~~~~~~~~--~~~~~~y~--~~-G~~~~~~ivllHG~~~~~~~-w~~~~~-----------~-------L~~~~~V 156 (383)
T PLN03084 101 GLKMGAQSQASS--DLFRWFCV--ES-GSNNNPPVLLIHGFPSQAYS-YRKVLP-----------V-------LSKNYHA 156 (383)
T ss_pred cccccceeEEcC--CceEEEEE--ec-CCCCCCeEEEECCCCCCHHH-HHHHHH-----------H-------HhcCCEE
Confidence 455556666532 24455543 23 23456899999999987765 433221 1 2345799
Q ss_pred EEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCcee
Q 044068 162 LFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFI 241 (481)
Q Consensus 162 lyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~i 241 (481)
+.+| ..|.|+|.......-...+.++.++++.+++++ +...+++|+|+|+||..+-.+|.+. +-
T Consensus 157 ia~D-lpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~-------l~~~~~~LvG~s~GG~ia~~~a~~~--------P~ 220 (383)
T PLN03084 157 IAFD-WLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE-------LKSDKVSLVVQGYFSPPVVKYASAH--------PD 220 (383)
T ss_pred EEEC-CCCCCCCCCCcccccccCCHHHHHHHHHHHHHH-------hCCCCceEEEECHHHHHHHHHHHhC--------hH
Confidence 9999 589999964322100012566777887777764 3345899999999997665665543 33
Q ss_pred cceeeeecCcccC
Q 044068 242 NLKGLAMGDAWID 254 (481)
Q Consensus 242 nLkGi~IGNg~~d 254 (481)
.++++++.|+...
T Consensus 221 ~v~~lILi~~~~~ 233 (383)
T PLN03084 221 KIKKLILLNPPLT 233 (383)
T ss_pred hhcEEEEECCCCc
Confidence 4899999997643
No 27
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.09 E-value=5.1e-09 Score=99.07 Aligned_cols=59 Identities=19% Similarity=0.175 Sum_probs=51.2
Q ss_pred cCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHH
Q 044068 389 SGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFS 468 (481)
Q Consensus 389 ~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~ 468 (481)
-.+||++.+|+.|.+++....+.+.+.+. +-++..+.++||+++.++|+...+.|.
T Consensus 187 i~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i~ 242 (245)
T TIGR01738 187 ISVPFLRLYGYLDGLVPAKVVPYLDKLAP------------------------HSELYIFAKAAHAPFLSHAEAFCALLV 242 (245)
T ss_pred CCCCEEEEeecCCcccCHHHHHHHHHhCC------------------------CCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 36899999999999999888776665543 457889999999999999999999999
Q ss_pred HHH
Q 044068 469 SFL 471 (481)
Q Consensus 469 ~fl 471 (481)
+|+
T Consensus 243 ~fi 245 (245)
T TIGR01738 243 AFK 245 (245)
T ss_pred hhC
Confidence 986
No 28
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.08 E-value=1.2e-09 Score=104.97 Aligned_cols=101 Identities=20% Similarity=0.187 Sum_probs=70.5
Q ss_pred CCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhHH
Q 044068 112 TKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAA 191 (481)
Q Consensus 112 ~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~ 191 (481)
+.|.||+++|.||++.. +-.+. ... +.++++.+| .+|.|.|.... . .+.++.++
T Consensus 1 ~~p~vvllHG~~~~~~~-w~~~~----------------~~l---~~~~vi~~D-~~G~G~S~~~~-~----~~~~~~~~ 54 (242)
T PRK11126 1 GLPWLVFLHGLLGSGQD-WQPVG----------------EAL---PDYPRLYID-LPGHGGSAAIS-V----DGFADVSR 54 (242)
T ss_pred CCCEEEEECCCCCChHH-HHHHH----------------HHc---CCCCEEEec-CCCCCCCCCcc-c----cCHHHHHH
Confidence 36889999999998876 53322 111 248999999 69999995321 1 15556677
Q ss_pred HHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcc
Q 044068 192 DSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAW 252 (481)
Q Consensus 192 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~ 252 (481)
++.++|. ++...+++++|+|+||..+-.+|.+... -.++++++.++.
T Consensus 55 ~l~~~l~-------~~~~~~~~lvG~S~Gg~va~~~a~~~~~-------~~v~~lvl~~~~ 101 (242)
T PRK11126 55 LLSQTLQ-------SYNILPYWLVGYSLGGRIAMYYACQGLA-------GGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHH-------HcCCCCeEEEEECHHHHHHHHHHHhCCc-------ccccEEEEeCCC
Confidence 7666665 2345799999999999988888875411 127888887654
No 29
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.06 E-value=1.2e-08 Score=108.30 Aligned_cols=134 Identities=17% Similarity=0.215 Sum_probs=85.3
Q ss_pred ceeEEeEEEecCCCCceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhh-hhhcCCeEEcCCCCccccCCcCcccccce
Q 044068 83 IDQYSGYVTVDPKAGRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGA-MMELGPFRVNSDGKSLSHNEYAWNNVANM 161 (481)
Q Consensus 83 ~~~ysGyl~v~~~~~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~-f~E~GP~~~~~~~~~l~~n~~sW~~~anv 161 (481)
.+.-.-|++.+ +..|||+.....++...|.||++||.+|.+.+ +.. +.+ .+.. .+.+...+
T Consensus 174 ~~~~~~~~~~~---~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~-W~~~~~~-----------~L~~---~~~~~yrV 235 (481)
T PLN03087 174 CKFCTSWLSSS---NESLFVHVQQPKDNKAKEDVLFIHGFISSSAF-WTETLFP-----------NFSD---AAKSTYRL 235 (481)
T ss_pred cceeeeeEeeC---CeEEEEEEecCCCCCCCCeEEEECCCCccHHH-HHHHHHH-----------HHHH---HhhCCCEE
Confidence 34445777764 35788887765333335789999999988876 431 100 0111 23456899
Q ss_pred EEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCcee
Q 044068 162 LFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFI 241 (481)
Q Consensus 162 lyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~i 241 (481)
+.+|. +|.|.|-......+ +.++.++++. +.+.+ ++...+++|.|+|+||..+-.+|.+..+
T Consensus 236 ia~Dl-~G~G~S~~p~~~~y---tl~~~a~~l~---~~ll~---~lg~~k~~LVGhSmGG~iAl~~A~~~Pe-------- 297 (481)
T PLN03087 236 FAVDL-LGFGRSPKPADSLY---TLREHLEMIE---RSVLE---RYKVKSFHIVAHSLGCILALALAVKHPG-------- 297 (481)
T ss_pred EEECC-CCCCCCcCCCCCcC---CHHHHHHHHH---HHHHH---HcCCCCEEEEEECHHHHHHHHHHHhChH--------
Confidence 99995 89999853221211 4455555553 12333 2345689999999999999888876533
Q ss_pred cceeeeecCcc
Q 044068 242 NLKGLAMGDAW 252 (481)
Q Consensus 242 nLkGi~IGNg~ 252 (481)
.++++++.++-
T Consensus 298 ~V~~LVLi~~~ 308 (481)
T PLN03087 298 AVKSLTLLAPP 308 (481)
T ss_pred hccEEEEECCC
Confidence 38888888763
No 30
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.01 E-value=8.3e-09 Score=97.48 Aligned_cols=105 Identities=24% Similarity=0.279 Sum_probs=68.3
Q ss_pred CCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhHHH
Q 044068 113 KPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAAD 192 (481)
Q Consensus 113 ~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d 192 (481)
+|+||.++|.+|.+.. +-.+. ...+ +..+++-+| .+|.|.|..... ....+.++.+++
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~----------------~~L~--~~~~v~~~d-~~g~G~s~~~~~--~~~~~~~~~~~~ 58 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALI----------------ELLG--PHFRCLAID-LPGHGSSQSPDE--IERYDFEEAAQD 58 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHH----------------HHhc--ccCeEEEEc-CCCCCCCCCCCc--cChhhHHHHHHH
Confidence 4889999999887766 42222 1112 347899999 579999854221 111144455555
Q ss_pred HHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 193 SYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 193 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
+ +..+.+. +..++++|.|+|+||..+..+|.+. +-.++++++.++..
T Consensus 59 ~---~~~~~~~---~~~~~~~l~G~S~Gg~ia~~~a~~~--------~~~v~~lil~~~~~ 105 (251)
T TIGR03695 59 I---LATLLDQ---LGIEPFFLVGYSMGGRIALYYALQY--------PERVQGLILESGSP 105 (251)
T ss_pred H---HHHHHHH---cCCCeEEEEEeccHHHHHHHHHHhC--------chheeeeEEecCCC
Confidence 2 2233333 2357899999999999999888765 23488988887654
No 31
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.00 E-value=3.1e-08 Score=103.71 Aligned_cols=119 Identities=18% Similarity=0.153 Sum_probs=75.3
Q ss_pred eeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCC
Q 044068 99 ALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTS 178 (481)
Q Consensus 99 ~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~ 178 (481)
.+....++. +.+.|.||.+||.++.+.. +.-.. -.+.+..+|+-+|. .|.|.|-.. .
T Consensus 93 ~~~~~~~~~--~~~~p~vvllHG~~~~~~~-~~~~~------------------~~L~~~~~vi~~D~-rG~G~S~~~-~ 149 (402)
T PLN02894 93 FINTVTFDS--KEDAPTLVMVHGYGASQGF-FFRNF------------------DALASRFRVIAIDQ-LGWGGSSRP-D 149 (402)
T ss_pred eEEEEEecC--CCCCCEEEEECCCCcchhH-HHHHH------------------HHHHhCCEEEEECC-CCCCCCCCC-C
Confidence 444444433 2467999999999876655 32111 11234578999995 899998422 1
Q ss_pred CCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 179 SDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 179 ~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
..+ .+.+++.+.+.+.+.+|.+. ....+++|.|||+||..+-.+|.+. +..++++++.++..
T Consensus 150 ~~~--~~~~~~~~~~~~~i~~~~~~---l~~~~~~lvGhS~GG~la~~~a~~~--------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 150 FTC--KSTEETEAWFIDSFEEWRKA---KNLSNFILLGHSFGGYVAAKYALKH--------PEHVQHLILVGPAG 211 (402)
T ss_pred ccc--ccHHHHHHHHHHHHHHHHHH---cCCCCeEEEEECHHHHHHHHHHHhC--------chhhcEEEEECCcc
Confidence 111 12234444455566666653 2345899999999999888777654 34488988888754
No 32
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.00 E-value=2.3e-08 Score=100.54 Aligned_cols=125 Identities=21% Similarity=0.307 Sum_probs=79.9
Q ss_pred EeEEEecCCCCceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCc-ccccceEEEe
Q 044068 87 SGYVTVDPKAGRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAW-NNVANMLFLE 165 (481)
Q Consensus 87 sGyl~v~~~~~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW-~~~anvlyiD 165 (481)
.+|+.+.+ +.+|+|+-. ..++ .|.||.+|||||.++. .... . .| .+..+|+.+|
T Consensus 6 ~~~~~~~~--~~~l~y~~~--g~~~-~~~lvllHG~~~~~~~-~~~~-----------------~--~~~~~~~~vi~~D 60 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS--GNPD-GKPVVFLHGGPGSGTD-PGCR-----------------R--FFDPETYRIVLFD 60 (306)
T ss_pred CCeEEcCC--CcEEEEEEC--cCCC-CCEEEEECCCCCCCCC-HHHH-----------------h--ccCccCCEEEEEC
Confidence 47888864 577887543 2222 4557899999987654 1110 0 11 1457999999
Q ss_pred cCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceeccee
Q 044068 166 SPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKG 245 (481)
Q Consensus 166 qPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkG 245 (481)
. .|.|.|..... ... .+.++.++|+..+++ . +...+++++|+||||..+-.+|.+..+ .+++
T Consensus 61 ~-~G~G~S~~~~~-~~~-~~~~~~~~dl~~l~~----~---l~~~~~~lvG~S~GG~ia~~~a~~~p~--------~v~~ 122 (306)
T TIGR01249 61 Q-RGCGKSTPHAC-LEE-NTTWDLVADIEKLRE----K---LGIKNWLVFGGSWGSTLALAYAQTHPE--------VVTG 122 (306)
T ss_pred C-CCCCCCCCCCC-ccc-CCHHHHHHHHHHHHH----H---cCCCCEEEEEECHHHHHHHHHHHHChH--------hhhh
Confidence 5 79999964321 111 144556666555443 2 334579999999999988888776533 3788
Q ss_pred eeecCcccC
Q 044068 246 LAMGDAWID 254 (481)
Q Consensus 246 i~IGNg~~d 254 (481)
+++.+..+.
T Consensus 123 lvl~~~~~~ 131 (306)
T TIGR01249 123 LVLRGIFLL 131 (306)
T ss_pred heeeccccC
Confidence 888877654
No 33
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.98 E-value=2.2e-08 Score=104.44 Aligned_cols=127 Identities=17% Similarity=0.181 Sum_probs=85.9
Q ss_pred CceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCc-ccccceEEEecCCCCCCCCC
Q 044068 97 GRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAW-NNVANMLFLESPAGVGFSYS 175 (481)
Q Consensus 97 ~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW-~~~anvlyiDqPvG~GfSy~ 175 (481)
+..+|++.++....+.+|+||++||.++.+.. +-.+.+ .+ .+-.+++-+|. .|.|.|-.
T Consensus 120 ~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~-~~~~a~------------------~L~~~Gy~V~~~D~-rGhG~S~~ 179 (395)
T PLN02652 120 RNALFCRSWAPAAGEMRGILIIIHGLNEHSGR-YLHFAK------------------QLTSCGFGVYAMDW-IGHGGSDG 179 (395)
T ss_pred CCEEEEEEecCCCCCCceEEEEECCchHHHHH-HHHHHH------------------HHHHCCCEEEEeCC-CCCCCCCC
Confidence 46788888866334457899999999876654 322221 11 23468999995 99999864
Q ss_pred CCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCc
Q 044068 176 NTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 176 ~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp 255 (481)
.. .+. .+.+..++|+..+++..-..+| ..+++|+|+|+||..+..+|. .. ..+-.++|+++.+|+++.
T Consensus 180 ~~--~~~-~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p--~~~~~v~glVL~sP~l~~ 247 (395)
T PLN02652 180 LH--GYV-PSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YP--SIEDKLEGIVLTSPALRV 247 (395)
T ss_pred CC--CCC-cCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----cc--CcccccceEEEECccccc
Confidence 32 222 2556678888888877666555 458999999999988765543 11 112358999999887653
No 34
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.98 E-value=2.2e-08 Score=102.75 Aligned_cols=103 Identities=17% Similarity=0.111 Sum_probs=69.9
Q ss_pred CCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhH
Q 044068 111 STKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTA 190 (481)
Q Consensus 111 ~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A 190 (481)
.+.|.||++||.+|++.. +..+.+ .| .+..+++-+| ..|.|.|-..... .+.++.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d-~~g~G~s~~~~~~----~~~~~~~ 184 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN-WLFNHA-----------AL-------AAGRPVIALD-LPGHGASSKAVGA----GSLDELA 184 (371)
T ss_pred CCCCeEEEECCCCCccch-HHHHHH-----------HH-------hcCCEEEEEc-CCCCCCCCCCCCC----CCHHHHH
Confidence 456889999999888776 443332 11 1237899999 5899998432111 2556666
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcc
Q 044068 191 ADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAW 252 (481)
Q Consensus 191 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~ 252 (481)
+++..+++ ++...+++|.|+|+||..+..+|.+- +-.++++++.++.
T Consensus 185 ~~~~~~~~-------~~~~~~~~lvG~S~Gg~~a~~~a~~~--------~~~v~~lv~~~~~ 231 (371)
T PRK14875 185 AAVLAFLD-------ALGIERAHLVGHSMGGAVALRLAARA--------PQRVASLTLIAPA 231 (371)
T ss_pred HHHHHHHH-------hcCCccEEEEeechHHHHHHHHHHhC--------chheeEEEEECcC
Confidence 66666554 23446899999999999999888753 2347888877654
No 35
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.94 E-value=2.2e-08 Score=102.39 Aligned_cols=62 Identities=16% Similarity=0.171 Sum_probs=53.3
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcC-CCccCCccChHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRG-AGHMVPSSQPARALAFFS 468 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~-AGHmvP~dqP~~al~mi~ 468 (481)
.+||||+.|+.|.++|....++..+.+. .+-.+++|.+ |||+++.++|++..++|.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~-----------------------p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~ 333 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG-----------------------PRGSLRVLRSPYGHDAFLKETDRIDAILT 333 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC-----------------------CCCeEEEEeCCccHHHHhcCHHHHHHHHH
Confidence 5899999999999999988888777753 2347888984 999999999999999999
Q ss_pred HHHcCC
Q 044068 469 SFLDGK 474 (481)
Q Consensus 469 ~fl~~~ 474 (481)
+|+...
T Consensus 334 ~FL~~~ 339 (343)
T PRK08775 334 TALRST 339 (343)
T ss_pred HHHHhc
Confidence 999653
No 36
>PRK10749 lysophospholipase L2; Provisional
Probab=98.93 E-value=5.5e-08 Score=98.95 Aligned_cols=125 Identities=11% Similarity=0.032 Sum_probs=82.2
Q ss_pred CceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCC
Q 044068 97 GRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSN 176 (481)
Q Consensus 97 ~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~ 176 (481)
+.+++|+.++.. ..+|+||.++|-.+.+.. +.-+. + .+. .+-.+++-+| ..|.|.|-..
T Consensus 40 g~~l~~~~~~~~--~~~~~vll~HG~~~~~~~-y~~~~---~--------~l~------~~g~~v~~~D-~~G~G~S~~~ 98 (330)
T PRK10749 40 DIPIRFVRFRAP--HHDRVVVICPGRIESYVK-YAELA---Y--------DLF------HLGYDVLIID-HRGQGRSGRL 98 (330)
T ss_pred CCEEEEEEccCC--CCCcEEEEECCccchHHH-HHHHH---H--------HHH------HCCCeEEEEc-CCCCCCCCCC
Confidence 567888887642 346899999998665544 32211 0 000 1346899999 5899999532
Q ss_pred CCC---CCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 177 TSS---DYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 177 ~~~---~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
... ... .+.++.++|+..+++...+.+ ...++++.|+|+||..+-.+|.+- +-.++|+++.+|..
T Consensus 99 ~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG~ia~~~a~~~--------p~~v~~lvl~~p~~ 166 (330)
T PRK10749 99 LDDPHRGHV-ERFNDYVDDLAAFWQQEIQPG---PYRKRYALAHSMGGAILTLFLQRH--------PGVFDAIALCAPMF 166 (330)
T ss_pred CCCCCcCcc-ccHHHHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHHHHHHHHHHhC--------CCCcceEEEECchh
Confidence 111 111 145677888888877655433 357899999999998877776543 33489999998875
Q ss_pred C
Q 044068 254 D 254 (481)
Q Consensus 254 d 254 (481)
.
T Consensus 167 ~ 167 (330)
T PRK10749 167 G 167 (330)
T ss_pred c
Confidence 4
No 37
>PLN02965 Probable pheophorbidase
Probab=98.91 E-value=3.2e-08 Score=96.55 Aligned_cols=59 Identities=7% Similarity=0.113 Sum_probs=52.2
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSS 469 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~ 469 (481)
.+|+++..|..|.++|....++..+.+. +-+++.+.+|||+++.++|++..++|.+
T Consensus 193 ~vP~lvi~g~~D~~~~~~~~~~~~~~~~------------------------~a~~~~i~~~GH~~~~e~p~~v~~~l~~ 248 (255)
T PLN02965 193 KVPRVYIKTAKDNLFDPVRQDVMVENWP------------------------PAQTYVLEDSDHSAFFSVPTTLFQYLLQ 248 (255)
T ss_pred CCCEEEEEcCCCCCCCHHHHHHHHHhCC------------------------cceEEEecCCCCchhhcCHHHHHHHHHH
Confidence 6999999999999999987777766654 4577889999999999999999999999
Q ss_pred HHc
Q 044068 470 FLD 472 (481)
Q Consensus 470 fl~ 472 (481)
|+.
T Consensus 249 ~~~ 251 (255)
T PLN02965 249 AVS 251 (255)
T ss_pred HHH
Confidence 975
No 38
>PLN02578 hydrolase
Probab=98.91 E-value=4e-08 Score=100.98 Aligned_cols=112 Identities=15% Similarity=0.185 Sum_probs=74.0
Q ss_pred CceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCC
Q 044068 97 GRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSN 176 (481)
Q Consensus 97 ~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~ 176 (481)
+.+++|.-.. +.|.||.+||-++.+.. +.... | .+.+..+++.+|. .|.|.|-..
T Consensus 75 ~~~i~Y~~~g-----~g~~vvliHG~~~~~~~-w~~~~---~---------------~l~~~~~v~~~D~-~G~G~S~~~ 129 (354)
T PLN02578 75 GHKIHYVVQG-----EGLPIVLIHGFGASAFH-WRYNI---P---------------ELAKKYKVYALDL-LGFGWSDKA 129 (354)
T ss_pred CEEEEEEEcC-----CCCeEEEECCCCCCHHH-HHHHH---H---------------HHhcCCEEEEECC-CCCCCCCCc
Confidence 3556664321 23557899987665444 32221 1 1234588999996 699988533
Q ss_pred CCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcc
Q 044068 177 TSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAW 252 (481)
Q Consensus 177 ~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~ 252 (481)
...+ +.+..++++.+|+++. ...+++|.|+|+||..+..+|.+..+ .++++++.|+.
T Consensus 130 -~~~~---~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~--------~v~~lvLv~~~ 186 (354)
T PLN02578 130 -LIEY---DAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYPE--------LVAGVALLNSA 186 (354)
T ss_pred -cccc---CHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhChH--------hcceEEEECCC
Confidence 2222 5566677877777643 24689999999999988888876533 48999988764
No 39
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.90 E-value=4.8e-08 Score=96.81 Aligned_cols=118 Identities=19% Similarity=0.210 Sum_probs=83.3
Q ss_pred ceeEEeEEEecCCCCceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceE
Q 044068 83 IDQYSGYVTVDPKAGRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANML 162 (481)
Q Consensus 83 ~~~ysGyl~v~~~~~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvl 162 (481)
.....+|++++ + +++++.|. .+.+.|+||.|+|=|=.+=. + ......+. .+-..+|
T Consensus 20 ~~~~hk~~~~~---g--I~~h~~e~-g~~~gP~illlHGfPe~wys-w-----------r~q~~~la------~~~~rvi 75 (322)
T KOG4178|consen 20 SAISHKFVTYK---G--IRLHYVEG-GPGDGPIVLLLHGFPESWYS-W-----------RHQIPGLA------SRGYRVI 75 (322)
T ss_pred hhcceeeEEEc---c--EEEEEEee-cCCCCCEEEEEccCCccchh-h-----------hhhhhhhh------hcceEEE
Confidence 34567888884 2 89999988 67889999999998865533 1 00000000 1127899
Q ss_pred EEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHh
Q 044068 163 FLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQF 234 (481)
Q Consensus 163 yiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 234 (481)
.+|. .|-|+|-.-.... ..+.+..++|+..+|. .+...++++.||+||+..+=.+|....+.
T Consensus 76 A~Dl-rGyG~Sd~P~~~~--~Yt~~~l~~di~~lld-------~Lg~~k~~lvgHDwGaivaw~la~~~Per 137 (322)
T KOG4178|consen 76 APDL-RGYGFSDAPPHIS--EYTIDELVGDIVALLD-------HLGLKKAFLVGHDWGAIVAWRLALFYPER 137 (322)
T ss_pred ecCC-CCCCCCCCCCCcc--eeeHHHHHHHHHHHHH-------HhccceeEEEeccchhHHHHHHHHhChhh
Confidence 9995 9999997544411 2377788888877776 44567899999999999988888777554
No 40
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.88 E-value=8.2e-08 Score=97.92 Aligned_cols=150 Identities=15% Similarity=0.135 Sum_probs=90.1
Q ss_pred CCceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhh--------cCCeEEcCCCCccccCCc------Cc-ccccc
Q 044068 96 AGRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMME--------LGPFRVNSDGKSLSHNEY------AW-NNVAN 160 (481)
Q Consensus 96 ~~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E--------~GP~~~~~~~~~l~~n~~------sW-~~~an 160 (481)
.+..|+++.++.. +.+-+|+.+||==+-+... |++ -+|+.|+.+. +..| .. .+-..
T Consensus 6 ~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~---~~~~~~~~~~~~~~~~~~~~r----y~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 6 DGLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQ---FLKINAKIVNNDRAVLIDTDN----YYIYKDSWIENFNKNGYS 76 (332)
T ss_pred CCCeEEEeeeecc--CCeEEEEEECCCchhhhhh---hhhcCcccCCCCeeEEEcCCc----ceEeeHHHHHHHHHCCCc
Confidence 3567888877653 2357999999854444321 222 1344453321 1111 22 34589
Q ss_pred eEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHC----------------cCCC-CCCEEEEcccccccc
Q 044068 161 MLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERF----------------PEYK-SRAFFLAGESYAGHY 223 (481)
Q Consensus 161 vlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~f----------------p~~~-~~~~yi~GESYgG~y 223 (481)
|+-+|. +|.|.|-+.+.......+-++.++|+..+++..-+.. .++. +.|++|.|||+||..
T Consensus 77 V~~~D~-rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i 155 (332)
T TIGR01607 77 VYGLDL-QGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNI 155 (332)
T ss_pred EEEecc-cccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHH
Confidence 999995 9999997643211111256778889888887654310 0232 579999999999998
Q ss_pred cHHHHHHHHHhccCCceecceeeeecCcccCc
Q 044068 224 IPQVALTILQFNKNQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 224 vP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp 255 (481)
+..++.+..+.........++|+++..|.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i 187 (332)
T TIGR01607 156 ALRLLELLGKSNENNDKLNIKGCISLSGMISI 187 (332)
T ss_pred HHHHHHHhccccccccccccceEEEeccceEE
Confidence 88777655322100012468999888887643
No 41
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.83 E-value=1.2e-07 Score=114.52 Aligned_cols=117 Identities=18% Similarity=0.158 Sum_probs=76.9
Q ss_pred eEEEE--EEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCC
Q 044068 100 LFYYF--VESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNT 177 (481)
Q Consensus 100 lFywf--fes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~ 177 (481)
+.||. .+..+.++.|.||+|||.+|++.. +-.+.+ ...+..+++.+| ..|.|.|....
T Consensus 1356 ~~~~i~~~~~G~~~~~~~vVllHG~~~s~~~-w~~~~~------------------~L~~~~rVi~~D-l~G~G~S~~~~ 1415 (1655)
T PLN02980 1356 FSCLIKVHEVGQNAEGSVVLFLHGFLGTGED-WIPIMK------------------AISGSARCISID-LPGHGGSKIQN 1415 (1655)
T ss_pred eEEEEEEEecCCCCCCCeEEEECCCCCCHHH-HHHHHH------------------HHhCCCEEEEEc-CCCCCCCCCcc
Confidence 44443 333344567899999999999876 433321 112347999999 57999986432
Q ss_pred C-----CCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcc
Q 044068 178 S-----SDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAW 252 (481)
Q Consensus 178 ~-----~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~ 252 (481)
. .... .+.+..++++.+++++ +...+++|.|+|+||..+-.+|.+.. -.++++++.++.
T Consensus 1416 ~~~~~~~~~~-~si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P--------~~V~~lVlis~~ 1479 (1655)
T PLN02980 1416 HAKETQTEPT-LSVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFS--------DKIEGAVIISGS 1479 (1655)
T ss_pred cccccccccc-CCHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhCh--------HhhCEEEEECCC
Confidence 1 0111 2456677777666652 34568999999999998888887543 337888877663
No 42
>PRK07581 hypothetical protein; Validated
Probab=98.82 E-value=4.5e-07 Score=92.37 Aligned_cols=59 Identities=19% Similarity=0.236 Sum_probs=52.8
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcC-CCccCCccChHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRG-AGHMVPSSQPARALAFFS 468 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~-AGHmvP~dqP~~al~mi~ 468 (481)
.+||||+.|+.|.++|....+.+.+.+. +.++++|.+ |||+++.+||+....+|+
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip------------------------~a~l~~i~~~~GH~~~~~~~~~~~~~~~ 330 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIP------------------------NAELRPIESIWGHLAGFGQNPADIAFID 330 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCccccccCcHHHHHHHH
Confidence 6999999999999999998888777654 457889999 999999999999999999
Q ss_pred HHHc
Q 044068 469 SFLD 472 (481)
Q Consensus 469 ~fl~ 472 (481)
+|+.
T Consensus 331 ~~~~ 334 (339)
T PRK07581 331 AALK 334 (339)
T ss_pred HHHH
Confidence 9984
No 43
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.80 E-value=2.4e-07 Score=92.39 Aligned_cols=135 Identities=16% Similarity=0.232 Sum_probs=91.3
Q ss_pred eeEEeEEEecCCCCceeEEEEEEe-CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceE
Q 044068 84 DQYSGYVTVDPKAGRALFYYFVES-QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANML 162 (481)
Q Consensus 84 ~~ysGyl~v~~~~~~~lFywffes-~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvl 162 (481)
+--+=|+.+.+. . ==|.++- ..+++++-++.+||= |.+++ +|. +|=-+..+..||.
T Consensus 64 ~~~~~~v~i~~~--~--~iw~~~~~~~~~~~~plVliHGy-GAg~g---~f~---------------~Nf~~La~~~~vy 120 (365)
T KOG4409|consen 64 PYSKKYVRIPNG--I--EIWTITVSNESANKTPLVLIHGY-GAGLG---LFF---------------RNFDDLAKIRNVY 120 (365)
T ss_pred CcceeeeecCCC--c--eeEEEeecccccCCCcEEEEecc-chhHH---HHH---------------HhhhhhhhcCceE
Confidence 334556776532 2 2255554 455778888889984 44432 233 2333455688999
Q ss_pred EEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceec
Q 044068 163 FLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFIN 242 (481)
Q Consensus 163 yiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~in 242 (481)
.|| +.|-|+|--.. +.. +.+.+-+.+.+-+++|.... +=.+.+|.|||+||......|.+..++
T Consensus 121 aiD-llG~G~SSRP~---F~~-d~~~~e~~fvesiE~WR~~~---~L~KmilvGHSfGGYLaa~YAlKyPer-------- 184 (365)
T KOG4409|consen 121 AID-LLGFGRSSRPK---FSI-DPTTAEKEFVESIEQWRKKM---GLEKMILVGHSFGGYLAAKYALKYPER-------- 184 (365)
T ss_pred Eec-ccCCCCCCCCC---CCC-CcccchHHHHHHHHHHHHHc---CCcceeEeeccchHHHHHHHHHhChHh--------
Confidence 999 69999995322 221 33344557888899999854 346899999999999888888766444
Q ss_pred ceeeeecCcccCccc
Q 044068 243 LKGLAMGDAWIDTET 257 (481)
Q Consensus 243 LkGi~IGNg~~dp~~ 257 (481)
++-+++.+||--|+.
T Consensus 185 V~kLiLvsP~Gf~~~ 199 (365)
T KOG4409|consen 185 VEKLILVSPWGFPEK 199 (365)
T ss_pred hceEEEecccccccC
Confidence 889999999987764
No 44
>PRK06489 hypothetical protein; Provisional
Probab=98.80 E-value=3.9e-07 Score=93.86 Aligned_cols=140 Identities=14% Similarity=0.104 Sum_probs=78.7
Q ss_pred ceeEEeEEEecCCCCceeEEEEEEe-C---CCCCCCeEEEEcCCCChhhhhhh--hhhhcCCeEEcCCCCccccCCcCcc
Q 044068 83 IDQYSGYVTVDPKAGRALFYYFVES-Q---NSSTKPLVLWLNGGPGCSSFGFG--AMMELGPFRVNSDGKSLSHNEYAWN 156 (481)
Q Consensus 83 ~~~ysGyl~v~~~~~~~lFywffes-~---~p~~~PlvlWlnGGPGcSSl~~g--~f~E~GP~~~~~~~~~l~~n~~sW~ 156 (481)
+...+|. ++ .+.+++|.-+.. . +.++.|.||.+||++|.+.. +- .+.+ ..+. ...---.
T Consensus 39 ~~~~~~~-~~---~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~-~~~~~~~~---~l~~-------~~~~l~~ 103 (360)
T PRK06489 39 FTFHSGE-TL---PELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKS-FLSPTFAG---ELFG-------PGQPLDA 103 (360)
T ss_pred eeccCCC-Cc---CCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhh-hccchhHH---HhcC-------CCCcccc
Confidence 4455674 33 245666654422 1 12336899999999887655 20 0000 0000 0000013
Q ss_pred cccceEEEecCCCCCCCCCCCCC---CCccCCchhhHHHHHHHHHHHHHHCcCCCCCCE-EEEcccccccccHHHHHHHH
Q 044068 157 NVANMLFLESPAGVGFSYSNTSS---DYVMNGDERTAADSYTFLLNWFERFPEYKSRAF-FLAGESYAGHYIPQVALTIL 232 (481)
Q Consensus 157 ~~anvlyiDqPvG~GfSy~~~~~---~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~-yi~GESYgG~yvP~lA~~i~ 232 (481)
+..+||.+|. .|.|.|-..... .....+.++.++++..++.+ ++.-.++ +|+|+|+||..+-.+|.+..
T Consensus 104 ~~~~Via~Dl-~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~------~lgi~~~~~lvG~SmGG~vAl~~A~~~P 176 (360)
T PRK06489 104 SKYFIILPDG-IGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE------GLGVKHLRLILGTSMGGMHAWMWGEKYP 176 (360)
T ss_pred cCCEEEEeCC-CCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH------hcCCCceeEEEEECHHHHHHHHHHHhCc
Confidence 5689999995 799998532111 00012445566666554432 2223466 48999999998888887653
Q ss_pred HhccCCceecceeeeecCcc
Q 044068 233 QFNKNQTFINLKGLAMGDAW 252 (481)
Q Consensus 233 ~~n~~~~~inLkGi~IGNg~ 252 (481)
+ .++++++.++.
T Consensus 177 ~--------~V~~LVLi~s~ 188 (360)
T PRK06489 177 D--------FMDALMPMASQ 188 (360)
T ss_pred h--------hhheeeeeccC
Confidence 3 38888887764
No 45
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.79 E-value=2.7e-07 Score=95.78 Aligned_cols=65 Identities=18% Similarity=0.210 Sum_probs=53.4
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEc-CCCccCCccChHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIR-GAGHMVPSSQPARALAFFS 468 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~-~AGHmvP~dqP~~al~mi~ 468 (481)
.+||||..|+.|.++|....++..+.+.=.+ ...+++.|. ++||+++.++|++..+.|.
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~--------------------~~~~l~~i~~~~GH~~~le~p~~~~~~L~ 368 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALLAAG--------------------ADVSYAEIDSPYGHDAFLLDDPRYGRLVR 368 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHHhcC--------------------CCeEEEEeCCCCCchhHhcCHHHHHHHHH
Confidence 6899999999999999998887777664000 123678886 9999999999999999999
Q ss_pred HHHcCC
Q 044068 469 SFLDGK 474 (481)
Q Consensus 469 ~fl~~~ 474 (481)
+|+.+.
T Consensus 369 ~FL~~~ 374 (379)
T PRK00175 369 AFLERA 374 (379)
T ss_pred HHHHhh
Confidence 999764
No 46
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.70 E-value=1.2e-07 Score=104.54 Aligned_cols=133 Identities=16% Similarity=0.246 Sum_probs=84.7
Q ss_pred EecCCCCceeEEEEEEe--CCCC-CCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCC-cCcccccceEEEec
Q 044068 91 TVDPKAGRALFYYFVES--QNSS-TKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNE-YAWNNVANMLFLES 166 (481)
Q Consensus 91 ~v~~~~~~~lFywffes--~~p~-~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~-~sW~~~anvlyiDq 166 (481)
.+....|..+..|++.- .++. +-|+|++++||| +++ +| +. ...+. .=+.+-+.||+++
T Consensus 369 ~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~-------~~-------~~~~~q~~~~~G~~V~~~n- 430 (620)
T COG1506 369 TYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VG-------YS-------FNPEIQVLASAGYAVLAPN- 430 (620)
T ss_pred EEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-cc-------cc-------cchhhHHHhcCCeEEEEeC-
Confidence 33333467899999866 3443 359999999999 555 33 01 11111 2245678999999
Q ss_pred CCCCC-CC--CCCCCC-CCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceec
Q 044068 167 PAGVG-FS--YSNTSS-DYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFIN 242 (481)
Q Consensus 167 PvG~G-fS--y~~~~~-~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~in 242 (481)
|.|++ |+ |..... ++ =....+|+.+++. |++..|..-..++.|+|.||||...-.++.+- + .
T Consensus 431 ~RGS~GyG~~F~~~~~~~~----g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~--------~-~ 496 (620)
T COG1506 431 YRGSTGYGREFADAIRGDW----GGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKT--------P-R 496 (620)
T ss_pred CCCCCccHHHHHHhhhhcc----CCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcC--------c-h
Confidence 77654 32 222111 11 1235788888888 99999988888999999999997555544322 2 3
Q ss_pred ceeeeecCcccCc
Q 044068 243 LKGLAMGDAWIDT 255 (481)
Q Consensus 243 LkGi~IGNg~~dp 255 (481)
++..+...+.++.
T Consensus 497 f~a~~~~~~~~~~ 509 (620)
T COG1506 497 FKAAVAVAGGVDW 509 (620)
T ss_pred hheEEeccCcchh
Confidence 6666666665554
No 47
>PLN02511 hydrolase
Probab=98.56 E-value=3.8e-07 Score=95.07 Aligned_cols=116 Identities=18% Similarity=0.196 Sum_probs=74.0
Q ss_pred eEEEecCCCCceeEEEEEEe---CCCCCCCeEEEEcCCCChhhhhh-hhhhhcCCeEEcCCCCccccCCcCcccccceEE
Q 044068 88 GYVTVDPKAGRALFYYFVES---QNSSTKPLVLWLNGGPGCSSFGF-GAMMELGPFRVNSDGKSLSHNEYAWNNVANMLF 163 (481)
Q Consensus 88 Gyl~v~~~~~~~lFywffes---~~p~~~PlvlWlnGGPGcSSl~~-g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvly 163 (481)
-++...+ |..+.+.++.. ..+.++|+||.|+|..|+|...+ --+. .....+-.+++-
T Consensus 74 e~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~-----------------~~~~~~g~~vv~ 134 (388)
T PLN02511 74 ECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHML-----------------LRARSKGWRVVV 134 (388)
T ss_pred EEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHH-----------------HHHHHCCCEEEE
Confidence 4566543 45565544432 23567899999999999874211 0011 001134578999
Q ss_pred EecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHH
Q 044068 164 LESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALT 230 (481)
Q Consensus 164 iDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 230 (481)
+|. .|.|-|-..... + .....++|+.++++..-.++| +.+++++|+|.||..+-.++.+
T Consensus 135 ~d~-rG~G~s~~~~~~-~---~~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~ 193 (388)
T PLN02511 135 FNS-RGCADSPVTTPQ-F---YSASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE 193 (388)
T ss_pred Eec-CCCCCCCCCCcC-E---EcCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh
Confidence 995 899998643222 1 223557788887776666665 5689999999999887666644
No 48
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.51 E-value=2.8e-06 Score=84.16 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=69.1
Q ss_pred CCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhH
Q 044068 111 STKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTA 190 (481)
Q Consensus 111 ~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A 190 (481)
.++|.||++||..+.++. +..+.+ .|.. +..+++-+|. .|.|.|....... .+.++.+
T Consensus 16 ~~~p~vvliHG~~~~~~~-w~~~~~-----------~L~~------~g~~vi~~dl-~g~G~s~~~~~~~---~~~~~~~ 73 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWC-WYKIRC-----------LMEN------SGYKVTCIDL-KSAGIDQSDADSV---TTFDEYN 73 (273)
T ss_pred CCCCeEEEECCCCCCcCc-HHHHHH-----------HHHh------CCCEEEEecc-cCCCCCCCCcccC---CCHHHHH
Confidence 567999999998776665 422221 1111 2468999996 6999875332211 2556666
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 191 ADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 191 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
+++.++++ ... ..++++|.||||||..+-.++.+.- -.++++++.++..
T Consensus 74 ~~l~~~i~----~l~--~~~~v~lvGhS~GG~v~~~~a~~~p--------~~v~~lv~~~~~~ 122 (273)
T PLN02211 74 KPLIDFLS----SLP--ENEKVILVGHSAGGLSVTQAIHRFP--------KKICLAVYVAATM 122 (273)
T ss_pred HHHHHHHH----hcC--CCCCEEEEEECchHHHHHHHHHhCh--------hheeEEEEecccc
Confidence 66666554 221 2479999999999998888876442 2378888876643
No 49
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.51 E-value=1.5e-05 Score=81.77 Aligned_cols=63 Identities=19% Similarity=0.209 Sum_probs=50.6
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEE-cCCCccCCccChHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAI-RGAGHMVPSSQPARALAFFS 468 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V-~~AGHmvP~dqP~~al~mi~ 468 (481)
.+|||++.|+.|.++|....+...+.+. .. .-..+|+.| .+|||+++.++|++..+.|.
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~--~~------------------~~~v~~~~i~~~~GH~~~le~p~~~~~~l~ 347 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALP--AA------------------GLRVTYVEIESPYGHDAFLVETDQVEELIR 347 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHh--hc------------------CCceEEEEeCCCCCcchhhcCHHHHHHHHH
Confidence 6899999999999999998888877764 00 001244556 58999999999999999999
Q ss_pred HHHc
Q 044068 469 SFLD 472 (481)
Q Consensus 469 ~fl~ 472 (481)
+|++
T Consensus 348 ~FL~ 351 (351)
T TIGR01392 348 GFLR 351 (351)
T ss_pred HHhC
Confidence 9984
No 50
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.49 E-value=3e-06 Score=86.19 Aligned_cols=61 Identities=33% Similarity=0.437 Sum_probs=54.1
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSS 469 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~ 469 (481)
+.||||..|+.|.++|....+...+++ .|..+..|.+|||.+..++|++....|..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~------------------------pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~ 319 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKL------------------------PNAELVEIPGAGHLPHLERPEEVAALLRS 319 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhC------------------------CCceEEEeCCCCcccccCCHHHHHHHHHH
Confidence 388999999999999999777766664 37899999999999999999999999999
Q ss_pred HHcCC
Q 044068 470 FLDGK 474 (481)
Q Consensus 470 fl~~~ 474 (481)
|+...
T Consensus 320 Fi~~~ 324 (326)
T KOG1454|consen 320 FIARL 324 (326)
T ss_pred HHHHh
Confidence 98753
No 51
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.48 E-value=4.3e-06 Score=87.92 Aligned_cols=80 Identities=19% Similarity=0.140 Sum_probs=55.4
Q ss_pred ccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccC
Q 044068 158 VANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKN 237 (481)
Q Consensus 158 ~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 237 (481)
-.+||-+|.| |+|.|-..... .+ .......+.+++...|.....++.|+|+|+||.+++.+|..-
T Consensus 222 Gy~vl~~D~p-G~G~s~~~~~~----~d----~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~------ 286 (414)
T PRK05077 222 GIAMLTIDMP-SVGFSSKWKLT----QD----SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE------ 286 (414)
T ss_pred CCEEEEECCC-CCCCCCCCCcc----cc----HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC------
Confidence 3789999976 99998532110 01 122223455666667766678999999999999999988643
Q ss_pred CceecceeeeecCcccC
Q 044068 238 QTFINLKGLAMGDAWID 254 (481)
Q Consensus 238 ~~~inLkGi~IGNg~~d 254 (481)
+-.++++++.+|.++
T Consensus 287 --p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 287 --PPRLKAVACLGPVVH 301 (414)
T ss_pred --CcCceEEEEECCccc
Confidence 224889888887764
No 52
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.42 E-value=1e-06 Score=83.01 Aligned_cols=56 Identities=23% Similarity=0.316 Sum_probs=49.5
Q ss_pred cCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHH
Q 044068 389 SGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFS 468 (481)
Q Consensus 389 ~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~ 468 (481)
..+|+++++|+.|.++|....+...+.+. +...+.+.++||+...+.|++.-++|.
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~~~------------------------~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKLIP------------------------NSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHHST------------------------TEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhcC------------------------CCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 47999999999999999998888666644 568899999999999999999998886
No 53
>PRK05855 short chain dehydrogenase; Validated
Probab=98.42 E-value=6.1e-06 Score=89.76 Aligned_cols=101 Identities=15% Similarity=0.129 Sum_probs=66.8
Q ss_pred CceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCC
Q 044068 97 GRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSN 176 (481)
Q Consensus 97 ~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~ 176 (481)
+..+.|+-+. +.+.|.||.+||.++.+.. +.-+.+ . +.+...|+.+| ..|.|.|...
T Consensus 12 g~~l~~~~~g---~~~~~~ivllHG~~~~~~~-w~~~~~-----------~-------L~~~~~Vi~~D-~~G~G~S~~~ 68 (582)
T PRK05855 12 GVRLAVYEWG---DPDRPTVVLVHGYPDNHEV-WDGVAP-----------L-------LADRFRVVAYD-VRGAGRSSAP 68 (582)
T ss_pred CEEEEEEEcC---CCCCCeEEEEcCCCchHHH-HHHHHH-----------H-------hhcceEEEEec-CCCCCCCCCC
Confidence 4667766442 2347999999999877665 433321 1 13457899999 5799999743
Q ss_pred CCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHH
Q 044068 177 TSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVA 228 (481)
Q Consensus 177 ~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 228 (481)
.... ..+.++.++|+.++++..- ..++++|+|+|+||..+-.++
T Consensus 69 ~~~~--~~~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 69 KRTA--AYTLARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred Cccc--ccCHHHHHHHHHHHHHHhC------CCCcEEEEecChHHHHHHHHH
Confidence 3211 1266788899888887421 134699999999995554443
No 54
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.37 E-value=7.8e-06 Score=82.14 Aligned_cols=277 Identities=16% Similarity=0.153 Sum_probs=157.6
Q ss_pred EEeEEEecCCCCceeEEEEEEe-CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEE
Q 044068 86 YSGYVTVDPKAGRALFYYFVES-QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFL 164 (481)
Q Consensus 86 ysGyl~v~~~~~~~lFywffes-~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyi 164 (481)
-.|+.... .+..++|+.+++ +++. -+|+++||.=.++.- |--+.+ .+. ..=+.|+=+
T Consensus 10 ~~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~-----------~l~------~~G~~V~~~ 67 (298)
T COG2267 10 TEGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELAD-----------DLA------ARGFDVYAL 67 (298)
T ss_pred ccceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHH-----------HHH------hCCCEEEEe
Confidence 34555543 368899999988 3333 899999999777665 422221 111 134678889
Q ss_pred ecCCCCCCCC-CCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecc
Q 044068 165 ESPAGVGFSY-SNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINL 243 (481)
Q Consensus 165 DqPvG~GfSy-~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inL 243 (481)
|+ .|.|.|. +... ... +-.+...|+..|++..-...| ..++||.|||.||-.+...+.+. .-++
T Consensus 68 D~-RGhG~S~r~~rg--~~~-~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~--------~~~i 132 (298)
T COG2267 68 DL-RGHGRSPRGQRG--HVD-SFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARY--------PPRI 132 (298)
T ss_pred cC-CCCCCCCCCCcC--Cch-hHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhC--------Cccc
Confidence 96 9999997 3322 111 345666676666665554433 67999999999998888777655 3459
Q ss_pred eeeeecCcccCcccccchhhhhhhhcccCCHHHHHhhhhcccCCcChHHHHHHHHHHHHhcCCCcc---ccccccCCCCC
Q 044068 244 KGLAMGDAWIDTETGNKGMFDFYWTHALISDEVIHGINSNCNFTKFSKACASYLIKAYESMGNINI---LDIYAPLCSSS 320 (481)
Q Consensus 244 kGi~IGNg~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~~~g~~n~---ydi~~~~c~~~ 320 (481)
+|+++-+|++.... ........... ......+.... .++. .++.. .+.
T Consensus 133 ~~~vLssP~~~l~~-~~~~~~~~~~~------------------------~~~~~~~~p~~-~~~~~~~~~~~~-~~~-- 183 (298)
T COG2267 133 DGLVLSSPALGLGG-AILRLILARLA------------------------LKLLGRIRPKL-PVDSNLLEGVLT-DDL-- 183 (298)
T ss_pred cEEEEECccccCCh-hHHHHHHHHHh------------------------ccccccccccc-ccCcccccCcCc-chh--
Confidence 99999999998763 00000000000 00000000000 0010 00000 000
Q ss_pred CCCCCCCCCCCCchhHHHhhcCcHHHHHhhccCCCCCcccccccChhhhhhcccCCCCcHHHHHHHHhcCceEEEEeCCC
Q 044068 321 FSTSSVLPFDPCSEIYVHSYLNSPQVQKSLHANVTGIRGPWQDCSDTVLRHWKDSPLTVLPSIQELMTSGISVYIYSGDT 400 (481)
Q Consensus 321 ~~~~~~~~~~~c~~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~l~~Ll~~~irVliy~Gd~ 400 (481)
.-.......|-.+|.... +.+. ..|..-.... .. .+....-....+||||.+|..
T Consensus 184 ----------sr~~~~~~~~~~dP~~~~--~~~~----~~w~~~~~~a-------~~--~~~~~~~~~~~~PvLll~g~~ 238 (298)
T COG2267 184 ----------SRDPAEVAAYEADPLIGV--GGPV----SRWVDLALLA-------GR--VPALRDAPAIALPVLLLQGGD 238 (298)
T ss_pred ----------hcCHHHHHHHhcCCcccc--CCcc----HHHHHHHHHh-------hc--ccchhccccccCCEEEEecCC
Confidence 000122333333331111 1110 0121110000 00 112222233469999999999
Q ss_pred Ccccc-chhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccCh---HHHHHHHHHHHcCCC
Q 044068 401 DGMVP-TISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQP---ARALAFFSSFLDGKL 475 (481)
Q Consensus 401 D~i~~-~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP---~~al~mi~~fl~~~~ 475 (481)
|.++. ..+..++++++.- .+.+++.+.||-|.+-.+.+ +++++-+..|+....
T Consensus 239 D~vv~~~~~~~~~~~~~~~----------------------~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 239 DRVVDNVEGLARFFERAGS----------------------PDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred CccccCcHHHHHHHHhcCC----------------------CCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 99999 6999999988773 34589999999999988865 588999999987653
No 55
>PRK10566 esterase; Provisional
Probab=98.28 E-value=1.5e-05 Score=77.21 Aligned_cols=62 Identities=23% Similarity=0.287 Sum_probs=47.5
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSS 469 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~ 469 (481)
..|+|+.+|+.|.+++...++++.+.++=.+. ..++++.++.|+||... | ..++-+.+
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~------------------~~~~~~~~~~~~~H~~~---~-~~~~~~~~ 243 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGL------------------DKNLTCLWEPGVRHRIT---P-EALDAGVA 243 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC------------------CcceEEEecCCCCCccC---H-HHHHHHHH
Confidence 37999999999999999999998888762222 12478999999999975 3 35666666
Q ss_pred HHcC
Q 044068 470 FLDG 473 (481)
Q Consensus 470 fl~~ 473 (481)
|+..
T Consensus 244 fl~~ 247 (249)
T PRK10566 244 FFRQ 247 (249)
T ss_pred HHHh
Confidence 7653
No 56
>PLN02872 triacylglycerol lipase
Probab=98.26 E-value=9.8e-06 Score=84.52 Aligned_cols=61 Identities=15% Similarity=0.366 Sum_probs=50.8
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCcc---CCccChHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHM---VPSSQPARALAF 466 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHm---vP~dqP~~al~m 466 (481)
.++|+|+.|+.|.+++....+++.+.|.= .-+...+.++||+ ...+.|+..++-
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~-----------------------~~~l~~l~~~gH~dfi~~~eape~V~~~ 381 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS-----------------------KPELLYLENYGHIDFLLSTSAKEDVYNH 381 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC-----------------------ccEEEEcCCCCCHHHHhCcchHHHHHHH
Confidence 58999999999999999999999988760 1245678999996 455899999999
Q ss_pred HHHHHcC
Q 044068 467 FSSFLDG 473 (481)
Q Consensus 467 i~~fl~~ 473 (481)
|.+|+..
T Consensus 382 Il~fL~~ 388 (395)
T PLN02872 382 MIQFFRS 388 (395)
T ss_pred HHHHHHH
Confidence 9999974
No 57
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.25 E-value=4.8e-05 Score=75.38 Aligned_cols=80 Identities=23% Similarity=0.200 Sum_probs=55.7
Q ss_pred ccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccC
Q 044068 158 VANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKN 237 (481)
Q Consensus 158 ~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 237 (481)
-.+++-+|. .|.|.|.... .+.++..+|+.++++.+-+..|.+ .++++.|+|.||..+-.+|..
T Consensus 57 G~~v~~~Dl-~G~G~S~~~~------~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~------- 120 (274)
T TIGR03100 57 GFPVLRFDY-RGMGDSEGEN------LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA------- 120 (274)
T ss_pred CCEEEEeCC-CCCCCCCCCC------CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh-------
Confidence 378999996 6999985321 134456778777777655555543 469999999999765555431
Q ss_pred CceecceeeeecCcccCc
Q 044068 238 QTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 238 ~~~inLkGi~IGNg~~dp 255 (481)
+-.++|+++.||++..
T Consensus 121 --~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 121 --DLRVAGLVLLNPWVRT 136 (274)
T ss_pred --CCCccEEEEECCccCC
Confidence 1249999999998653
No 58
>PRK10985 putative hydrolase; Provisional
Probab=98.23 E-value=7e-05 Score=76.03 Aligned_cols=132 Identities=14% Similarity=0.099 Sum_probs=69.6
Q ss_pred EEecCCCCceeEEEEEEe-CCCCCCCeEEEEcCCCChhhhhhhh-hhhcCCeEEcCCCCccccCCcCcccccceEEEecC
Q 044068 90 VTVDPKAGRALFYYFVES-QNSSTKPLVLWLNGGPGCSSFGFGA-MMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESP 167 (481)
Q Consensus 90 l~v~~~~~~~lFywffes-~~p~~~PlvlWlnGGPGcSSl~~g~-f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqP 167 (481)
++..+ |..+.+++.+. ..+.++|+||.+||.+|++...+.. +.+ .+. .+-.+++-+|.
T Consensus 36 ~~~~d--g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~-----------~l~------~~G~~v~~~d~- 95 (324)
T PRK10985 36 LELPD--GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE-----------AAQ------KRGWLGVVMHF- 95 (324)
T ss_pred EECCC--CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH-----------HHH------HCCCEEEEEeC-
Confidence 44433 34444444444 3456789999999999975421110 110 111 11246777885
Q ss_pred CCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeee
Q 044068 168 AGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLA 247 (481)
Q Consensus 168 vG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~ 247 (481)
.|.|-|-......+. ....+|+..+++..-++++ ..+++++|+|+||..+-..+.+..+ ...+++++
T Consensus 96 rG~g~~~~~~~~~~~----~~~~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~~~~------~~~~~~~v 162 (324)
T PRK10985 96 RGCSGEPNRLHRIYH----SGETEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAKEGD------DLPLDAAV 162 (324)
T ss_pred CCCCCCccCCcceEC----CCchHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHhhCC------CCCccEEE
Confidence 788755322112111 1124555554433333344 5689999999999876555543311 22366655
Q ss_pred ecCcccC
Q 044068 248 MGDAWID 254 (481)
Q Consensus 248 IGNg~~d 254 (481)
+.++-.+
T Consensus 163 ~i~~p~~ 169 (324)
T PRK10985 163 IVSAPLM 169 (324)
T ss_pred EEcCCCC
Confidence 5555444
No 59
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.19 E-value=3.8e-05 Score=71.80 Aligned_cols=104 Identities=22% Similarity=0.245 Sum_probs=66.5
Q ss_pred CCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhHHH
Q 044068 113 KPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAAD 192 (481)
Q Consensus 113 ~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d 192 (481)
.|.++++||+|+++.. +....+. +..... + .+++.+|+| |.|.|. .. .. .....+++
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~~~~~-----------~~~~~~---~-~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~ 77 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRPVFKV-----------LPALAA---R-YRVIAPDLR-GHGRSD-PA--GY---SLSAYADD 77 (282)
T ss_pred CCeEEEeCCCCCchhh-hHHHHHH-----------hhcccc---c-eEEEEeccc-CCCCCC-cc--cc---cHHHHHHH
Confidence 6799999999999887 4321100 111111 1 899999998 999996 11 11 22222555
Q ss_pred HHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccC
Q 044068 193 SYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWID 254 (481)
Q Consensus 193 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~d 254 (481)
+..+++ ++...++++.|+|+||..+-.++.+..+ .++++++.++...
T Consensus 78 ~~~~~~-------~~~~~~~~l~G~S~Gg~~~~~~~~~~p~--------~~~~~v~~~~~~~ 124 (282)
T COG0596 78 LAALLD-------ALGLEKVVLVGHSMGGAVALALALRHPD--------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHH-------HhCCCceEEEEecccHHHHHHHHHhcch--------hhheeeEecCCCC
Confidence 555444 2333459999999998877777766533 4788887776655
No 60
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.19 E-value=0.00019 Score=74.87 Aligned_cols=67 Identities=16% Similarity=0.122 Sum_probs=55.3
Q ss_pred hcCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcC-CCccCCccChHHHHHH
Q 044068 388 TSGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRG-AGHMVPSSQPARALAF 466 (481)
Q Consensus 388 ~~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~-AGHmvP~dqP~~al~m 466 (481)
.-..||||+.|+.|.++|....++..+.+.=.+ .+.+++.|.+ +||+++.++|+...+.
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~--------------------~~a~l~~I~s~~GH~~~le~p~~~~~~ 380 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQKQG--------------------KYAEVYEIESINGHMAGVFDIHLFEKK 380 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcC--------------------CCeEEEEECCCCCcchhhcCHHHHHHH
Confidence 336999999999999999988887777654000 2468899986 9999999999999999
Q ss_pred HHHHHcCC
Q 044068 467 FSSFLDGK 474 (481)
Q Consensus 467 i~~fl~~~ 474 (481)
|.+|+..+
T Consensus 381 I~~FL~~~ 388 (389)
T PRK06765 381 IYEFLNRK 388 (389)
T ss_pred HHHHHccc
Confidence 99999764
No 61
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.17 E-value=9.5e-06 Score=76.92 Aligned_cols=92 Identities=12% Similarity=0.023 Sum_probs=59.9
Q ss_pred cccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhcc
Q 044068 157 NVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNK 236 (481)
Q Consensus 157 ~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 236 (481)
+=..|+.+|.+-+.||+..-....... .-....+|+.++++...++. ......+.|+|.||||+.+-.++.+.
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~-~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~----- 85 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGD-WGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQH----- 85 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTG-TTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHT-----
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhcc-ccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhccc-----
Confidence 557899999766676665211111111 23456788888666554443 45567899999999999888877632
Q ss_pred CCceecceeeeecCcccCcccc
Q 044068 237 NQTFINLKGLAMGDAWIDTETG 258 (481)
Q Consensus 237 ~~~~inLkGi~IGNg~~dp~~q 258 (481)
+-.++.++.++|.+|+...
T Consensus 86 ---~~~f~a~v~~~g~~d~~~~ 104 (213)
T PF00326_consen 86 ---PDRFKAAVAGAGVSDLFSY 104 (213)
T ss_dssp ---CCGSSEEEEESE-SSTTCS
T ss_pred ---ceeeeeeeccceecchhcc
Confidence 3347999999999987654
No 62
>PLN02442 S-formylglutathione hydrolase
Probab=97.99 E-value=0.00029 Score=70.27 Aligned_cols=57 Identities=14% Similarity=0.093 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 189 TAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 189 ~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
..+++-..+..++.. ....+++|+|+|+||+-+-.+|.+- +-.+++++..+|..++.
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~--------p~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKN--------PDKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhC--------chhEEEEEEECCccCcc
Confidence 344555555555543 4456799999999998777766543 22378888888887754
No 63
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.90 E-value=1.9e-05 Score=80.73 Aligned_cols=128 Identities=18% Similarity=0.303 Sum_probs=80.6
Q ss_pred eEEEEEEe---CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCC
Q 044068 100 LFYYFVES---QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSN 176 (481)
Q Consensus 100 lFywffes---~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~ 176 (481)
=.||++++ .+|++||+||++||| |.+.+.=|+.+- ...+=|..-+...+|.+|- |-+.
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~-----~L~~i~~~l~~~SILvLDY------sLt~ 166 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIE-----FLLNIYKLLPEVSILVLDY------SLTS 166 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHH-----HHHHHHHHcCCCeEEEEec------cccc
Confidence 47999996 368889999999999 445555554431 0111111222349999995 3222
Q ss_pred ---CCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 177 ---TSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 177 ---~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
.+..|++ ...++.+..+...+. -..+++.|.|+|-||+.+-.+..++.+.++ .+-=|+.++..||+
T Consensus 167 ~~~~~~~yPt-----QL~qlv~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~---~~~Pk~~iLISPWv 235 (374)
T PF10340_consen 167 SDEHGHKYPT-----QLRQLVATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPNK---LPYPKSAILISPWV 235 (374)
T ss_pred cccCCCcCch-----HHHHHHHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcCC---CCCCceeEEECCCc
Confidence 2223331 233333333333322 235689999999999999999999876553 12237899999999
Q ss_pred Cccc
Q 044068 254 DTET 257 (481)
Q Consensus 254 dp~~ 257 (481)
++..
T Consensus 236 ~l~~ 239 (374)
T PF10340_consen 236 NLVP 239 (374)
T ss_pred CCcC
Confidence 9973
No 64
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.89 E-value=0.00088 Score=66.11 Aligned_cols=129 Identities=21% Similarity=0.175 Sum_probs=86.2
Q ss_pred CCceeEEEEEEe-CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCC
Q 044068 96 AGRALFYYFVES-QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSY 174 (481)
Q Consensus 96 ~~~~lFywffes-~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy 174 (481)
.+..||.-.+.- .+++-.-+|+.++|.-+-||.-+--+. . .|.. .-.-+..+|+ .|.|.|-
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a---~--------~l~~------~g~~v~a~D~-~GhG~Sd 97 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTA---K--------RLAK------SGFAVYAIDY-EGHGRSD 97 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHH---H--------HHHh------CCCeEEEeec-cCCCcCC
Confidence 367888866654 445667799999997666643121111 0 1111 1234678997 9999997
Q ss_pred CCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccC
Q 044068 175 SNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWID 254 (481)
Q Consensus 175 ~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~d 254 (481)
+- ..|. .+.+.+.+|...|+..+- ...++++.+.|+.|||.||..+-.++.+ + +--..|+++..|+.-
T Consensus 98 Gl--~~yi-~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k--~------p~~w~G~ilvaPmc~ 165 (313)
T KOG1455|consen 98 GL--HAYV-PSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK--D------PNFWDGAILVAPMCK 165 (313)
T ss_pred CC--cccC-CcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh--C------Ccccccceeeecccc
Confidence 54 3343 378889999888777654 3568889999999999999877766654 1 233778877777653
No 65
>PRK10115 protease 2; Provisional
Probab=97.53 E-value=0.0014 Score=73.41 Aligned_cols=139 Identities=12% Similarity=0.080 Sum_probs=80.9
Q ss_pred EEecCCCCceeEEEEEEe---CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEec
Q 044068 90 VTVDPKAGRALFYYFVES---QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLES 166 (481)
Q Consensus 90 l~v~~~~~~~lFywffes---~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDq 166 (481)
+.+....|..+-.|++-. ......|+||+.+||||.|... ++.. .-.+|...-=++.+=+
T Consensus 419 v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p-~f~~----------------~~~~l~~rG~~v~~~n 481 (686)
T PRK10115 419 LWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA-DFSF----------------SRLSLLDRGFVYAIVH 481 (686)
T ss_pred EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC-CccH----------------HHHHHHHCCcEEEEEE
Confidence 333334467777766643 2235569999999999998642 2111 1123444433444444
Q ss_pred CCCCCCCCCCCC--C-CCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecc
Q 044068 167 PAGVGFSYSNTS--S-DYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINL 243 (481)
Q Consensus 167 PvG~GfSy~~~~--~-~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inL 243 (481)
+.|.| .|+..- . ... .-...-+|+.++.+...++ .--...++.|.|-||||..+-.++.+- +-.+
T Consensus 482 ~RGs~-g~G~~w~~~g~~~--~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~--------Pdlf 549 (686)
T PRK10115 482 VRGGG-ELGQQWYEDGKFL--KKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQR--------PELF 549 (686)
T ss_pred cCCCC-ccCHHHHHhhhhh--cCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcC--------hhhe
Confidence 77754 343210 0 000 1113466777655544333 323456799999999998665555322 3349
Q ss_pred eeeeecCcccCccc
Q 044068 244 KGLAMGDAWIDTET 257 (481)
Q Consensus 244 kGi~IGNg~~dp~~ 257 (481)
++++.++|++|+..
T Consensus 550 ~A~v~~vp~~D~~~ 563 (686)
T PRK10115 550 HGVIAQVPFVDVVT 563 (686)
T ss_pred eEEEecCCchhHhh
Confidence 99999999999764
No 66
>PRK11460 putative hydrolase; Provisional
Probab=97.52 E-value=0.0017 Score=62.68 Aligned_cols=62 Identities=13% Similarity=0.140 Sum_probs=48.1
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSS 469 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~ 469 (481)
+.+|++.+|+.|.++|+...++..+.|+=.+ .+.++..+.++||.+..+.-+.+.+.|++
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g--------------------~~~~~~~~~~~gH~i~~~~~~~~~~~l~~ 207 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLG--------------------GDVTLDIVEDLGHAIDPRLMQFALDRLRY 207 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCC--------------------CCeEEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 4799999999999999999998888876211 24688889999999976555555555555
Q ss_pred HH
Q 044068 470 FL 471 (481)
Q Consensus 470 fl 471 (481)
++
T Consensus 208 ~l 209 (232)
T PRK11460 208 TV 209 (232)
T ss_pred Hc
Confidence 55
No 67
>PRK13604 luxD acyl transferase; Provisional
Probab=97.42 E-value=0.0046 Score=62.09 Aligned_cols=122 Identities=16% Similarity=0.150 Sum_probs=70.6
Q ss_pred CceeEEEEEEe--CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCC
Q 044068 97 GRALFYYFVES--QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSY 174 (481)
Q Consensus 97 ~~~lFywffes--~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy 174 (481)
+..|.=|+.+. ++++..|+||..+| .|+....+ ...-.+=+.+=.++|-.|.--|.|-|-
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~-----------------~~~A~~La~~G~~vLrfD~rg~~GeS~ 80 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIASG-FARRMDHF-----------------AGLAEYLSSNGFHVIRYDSLHHVGLSS 80 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChHHH-----------------HHHHHHHHHCCCEEEEecCCCCCCCCC
Confidence 44555555555 24556788888776 55543211 112223345668899999644569884
Q ss_pred CCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccC
Q 044068 175 SNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWID 254 (481)
Q Consensus 175 ~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~d 254 (481)
++- .+. +...-..|+.. ..+|++.. ...+++|.|+|.||.-+...|. ..+++++++..|+.+
T Consensus 81 G~~-~~~---t~s~g~~Dl~a-aid~lk~~---~~~~I~LiG~SmGgava~~~A~----------~~~v~~lI~~sp~~~ 142 (307)
T PRK13604 81 GTI-DEF---TMSIGKNSLLT-VVDWLNTR---GINNLGLIAASLSARIAYEVIN----------EIDLSFLITAVGVVN 142 (307)
T ss_pred Ccc-ccC---cccccHHHHHH-HHHHHHhc---CCCceEEEEECHHHHHHHHHhc----------CCCCCEEEEcCCccc
Confidence 432 111 22223455544 23344442 2357999999999988544442 224888999888876
No 68
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.36 E-value=0.00039 Score=67.63 Aligned_cols=108 Identities=25% Similarity=0.377 Sum_probs=76.7
Q ss_pred CCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhH
Q 044068 111 STKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTA 190 (481)
Q Consensus 111 ~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A 190 (481)
..-|+++.+||| |.|.|.+..|. ..+..+ -.--++-+| -.|.|-|-.++..+. +-+..+
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a-----------~el~s~-----~~~r~~a~D-lRgHGeTk~~~e~dl---S~eT~~ 130 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFA-----------SELKSK-----IRCRCLALD-LRGHGETKVENEDDL---SLETMS 130 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHH-----------HHHHhh-----cceeEEEee-ccccCccccCChhhc---CHHHHH
Confidence 456999999998 88887666655 111111 011237899 799999988777664 678899
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecC
Q 044068 191 ADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGD 250 (481)
Q Consensus 191 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGN 250 (481)
+|+...++.+|..-| .+++|+|||.||-.+.+.|..=. --+|.|+.+.+
T Consensus 131 KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k~-------lpsl~Gl~viD 179 (343)
T KOG2564|consen 131 KDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASKT-------LPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhhhh-------chhhhceEEEE
Confidence 999999998885433 36999999999998866554221 23488888765
No 69
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.35 E-value=0.0015 Score=64.65 Aligned_cols=126 Identities=12% Similarity=0.046 Sum_probs=79.9
Q ss_pred CceeEEEEEEeCCCCCCCeEEEEcCCCC---hhhhhhhhhhhcCCeEEcCCCCccccCCcCcc-cccceEEEecCCCCCC
Q 044068 97 GRALFYYFVESQNSSTKPLVLWLNGGPG---CSSFGFGAMMELGPFRVNSDGKSLSHNEYAWN-NVANMLFLESPAGVGF 172 (481)
Q Consensus 97 ~~~lFywffes~~p~~~PlvlWlnGGPG---cSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~-~~anvlyiDqPvG~Gf 172 (481)
..++|.|+++..++...|+||.+||-.+ ++.-.+..+. -.+. +-.+++-+|. .|.|.
T Consensus 9 ~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la------------------~~La~~Gy~Vl~~Dl-~G~G~ 69 (266)
T TIGR03101 9 HGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQA------------------RAFAAGGFGVLQIDL-YGCGD 69 (266)
T ss_pred CCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHH------------------HHHHHCCCEEEEECC-CCCCC
Confidence 4568899987733334799999998543 1111011111 0122 3478999995 89999
Q ss_pred CCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcc
Q 044068 173 SYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAW 252 (481)
Q Consensus 173 Sy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~ 252 (481)
|-..... .+.+...+|+..++ +|++.. ...+++|+|+|+||..+..+|.+. +..++++++.+|.
T Consensus 70 S~g~~~~----~~~~~~~~Dv~~ai-~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~--------p~~v~~lVL~~P~ 133 (266)
T TIGR03101 70 SAGDFAA----ARWDVWKEDVAAAY-RWLIEQ---GHPPVTLWGLRLGALLALDAANPL--------AAKCNRLVLWQPV 133 (266)
T ss_pred CCCcccc----CCHHHHHHHHHHHH-HHHHhc---CCCCEEEEEECHHHHHHHHHHHhC--------ccccceEEEeccc
Confidence 8643221 13445566766543 345432 246899999999999988887654 2348899999888
Q ss_pred cCccc
Q 044068 253 IDTET 257 (481)
Q Consensus 253 ~dp~~ 257 (481)
++...
T Consensus 134 ~~g~~ 138 (266)
T TIGR03101 134 VSGKQ 138 (266)
T ss_pred cchHH
Confidence 77553
No 70
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.34 E-value=0.0037 Score=62.51 Aligned_cols=61 Identities=21% Similarity=0.256 Sum_probs=50.1
Q ss_pred cCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHH
Q 044068 389 SGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFS 468 (481)
Q Consensus 389 ~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~ 468 (481)
...+||+..|..+.-++..-..+..+. +.+..+..+++|||+|..|+|+...+.|.
T Consensus 252 ~~~pvlfi~g~~S~fv~~~~~~~~~~~------------------------fp~~e~~~ld~aGHwVh~E~P~~~~~~i~ 307 (315)
T KOG2382|consen 252 YTGPVLFIKGLQSKFVPDEHYPRMEKI------------------------FPNVEVHELDEAGHWVHLEKPEEFIESIS 307 (315)
T ss_pred cccceeEEecCCCCCcChhHHHHHHHh------------------------ccchheeecccCCceeecCCHHHHHHHHH
Confidence 458999999999998887765555444 33567888899999999999999999999
Q ss_pred HHHcC
Q 044068 469 SFLDG 473 (481)
Q Consensus 469 ~fl~~ 473 (481)
.|+..
T Consensus 308 ~Fl~~ 312 (315)
T KOG2382|consen 308 EFLEE 312 (315)
T ss_pred HHhcc
Confidence 98854
No 71
>PRK11071 esterase YqiA; Provisional
Probab=97.29 E-value=0.0013 Score=61.50 Aligned_cols=54 Identities=11% Similarity=0.064 Sum_probs=44.8
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSS 469 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~ 469 (481)
..+|+|.+|+.|-++|+..+.+..++ ...+.++||+|.- ...+..++.+..
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~---------------------------~~~~~~~ggdH~f--~~~~~~~~~i~~ 186 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAA---------------------------CRQTVEEGGNHAF--VGFERYFNQIVD 186 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHh---------------------------cceEEECCCCcch--hhHHHhHHHHHH
Confidence 47899999999999999999888764 2446789999998 444889999999
Q ss_pred HHc
Q 044068 470 FLD 472 (481)
Q Consensus 470 fl~ 472 (481)
|+.
T Consensus 187 fl~ 189 (190)
T PRK11071 187 FLG 189 (190)
T ss_pred Hhc
Confidence 874
No 72
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.21 E-value=0.0014 Score=62.18 Aligned_cols=119 Identities=13% Similarity=0.043 Sum_probs=61.0
Q ss_pred CCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCC--CCCccCCch
Q 044068 110 SSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTS--SDYVMNGDE 187 (481)
Q Consensus 110 p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~--~~~~~~~~~ 187 (481)
.+..|+||+|||+++.++. +.. ..+ + ....=..-+.||..|. .|.|.+...-. .........
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~--~~~-~-----------~~~a~~~g~~Vv~Pd~-~g~~~~~~~~~~~~~~~~~~~~ 73 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVI--DWG-W-----------KAAADRYGFVLVAPEQ-TSYNSSNNCWDWFFTHHRARGT 73 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-Hhh--hcC-h-----------HHHHHhCCeEEEecCC-cCccccCCCCCCCCccccCCCC
Confidence 3568999999999987664 210 000 0 0000012357777786 44432211000 000000011
Q ss_pred hhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 188 RTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
....++.+++....++++ ....+++|+|+|.||..+-.+|.+- +-.++++++..|..
T Consensus 74 ~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~~--------p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 74 GEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCTY--------PDVFAGGASNAGLP 130 (212)
T ss_pred ccHHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHhC--------chhheEEEeecCCc
Confidence 223444444444444432 3446899999999999877766543 22377777766643
No 73
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.11 E-value=0.0058 Score=60.50 Aligned_cols=42 Identities=17% Similarity=0.107 Sum_probs=32.1
Q ss_pred CCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 207 YKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 207 ~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
...++++|+|+|+||..+-.+|.+- +-.+++++..+|+.++.
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~--------p~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKN--------PDRFKSVSAFAPIVAPS 176 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhC--------cccceEEEEECCccCcc
Confidence 4456899999999998777777653 22378999889888753
No 74
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=97.09 E-value=0.015 Score=59.68 Aligned_cols=61 Identities=11% Similarity=0.187 Sum_probs=47.4
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccCh---HHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQP---ARALAF 466 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP---~~al~m 466 (481)
.+||++++|+.|.++++...+.+.+.+.= ...++..+ .+||+.+.+.| +.+..-
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~~----------------------~~~~~~~~-~~gH~~~~~~~~~~~~v~~~ 342 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVSS----------------------EDYTELSF-PGGHIGIYVSGKAQKEVPPA 342 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcCC----------------------CCeEEEEc-CCCCEEEEECchhHhhhhHH
Confidence 69999999999999999999988887651 12355555 48999998876 566777
Q ss_pred HHHHHcC
Q 044068 467 FSSFLDG 473 (481)
Q Consensus 467 i~~fl~~ 473 (481)
+.+|+..
T Consensus 343 i~~wl~~ 349 (350)
T TIGR01836 343 IGKWLQA 349 (350)
T ss_pred HHHHHHh
Confidence 7778753
No 75
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.01 E-value=0.00055 Score=68.03 Aligned_cols=112 Identities=14% Similarity=0.155 Sum_probs=69.1
Q ss_pred CCCCeEEEEcCCCChh-hhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhh
Q 044068 111 STKPLVLWLNGGPGCS-SFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERT 189 (481)
Q Consensus 111 ~~~PlvlWlnGGPGcS-Sl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~ 189 (481)
.+.|++|++||-.|.. .. + +. ...+.+.-....|||.||-+.+..-.|.. . ..+...+
T Consensus 34 ~~~p~vilIHG~~~~~~~~-~--~~-------------~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a---~~~~~~v 92 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEES-W--IS-------------DLRKAYLSRGDYNVIVVDWGRGANPNYPQ--A---VNNTRVV 92 (275)
T ss_pred CCCCcEEEEcCCCCCCCCc-H--HH-------------HHHHHHHhcCCCEEEEEECccccccChHH--H---HHhHHHH
Confidence 4579999999987754 22 1 00 00111111245899999976542111211 0 0144566
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcc
Q 044068 190 AADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAW 252 (481)
Q Consensus 190 A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~ 252 (481)
++++..+|+...+.. .+...+++|+|+|+||+.+-.+|.+..+ +++.|+..+|.
T Consensus 93 ~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~--------~v~~iv~LDPa 146 (275)
T cd00707 93 GAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG--------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC--------ccceeEEecCC
Confidence 777777777655542 2334689999999999999988876622 48888887765
No 76
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.91 E-value=0.034 Score=60.20 Aligned_cols=85 Identities=7% Similarity=-0.065 Sum_probs=52.8
Q ss_pred ccceEEEecCCCCCCCCCCCCCCCccCCchhhH-HHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhcc
Q 044068 158 VANMLFLESPAGVGFSYSNTSSDYVMNGDERTA-ADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNK 236 (481)
Q Consensus 158 ~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A-~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 236 (481)
-..++-|| -.|.|.|.... +.++.+ +++.++|..+.+. ....+++++|+|.||..+...+..+....
T Consensus 220 Gf~V~~iD-wrgpg~s~~~~-------~~ddY~~~~i~~al~~v~~~---~g~~kv~lvG~cmGGtl~a~ala~~aa~~- 287 (532)
T TIGR01838 220 GHTVFVIS-WRNPDASQADK-------TFDDYIRDGVIAALEVVEAI---TGEKQVNCVGYCIGGTLLSTALAYLAARG- 287 (532)
T ss_pred CcEEEEEE-CCCCCcccccC-------ChhhhHHHHHHHHHHHHHHh---cCCCCeEEEEECcCcHHHHHHHHHHHHhC-
Confidence 36788899 57888774321 222233 4456666655543 34678999999999998765333222221
Q ss_pred CCceecceeeeecCcccCcc
Q 044068 237 NQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 237 ~~~~inLkGi~IGNg~~dp~ 256 (481)
.+-.++++++.+..+|..
T Consensus 288 --~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 288 --DDKRIKSATFFTTLLDFS 305 (532)
T ss_pred --CCCccceEEEEecCcCCC
Confidence 122488888888888764
No 77
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.70 E-value=0.008 Score=67.88 Aligned_cols=63 Identities=13% Similarity=0.145 Sum_probs=50.8
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccCh-HHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQP-ARALAFFS 468 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP-~~al~mi~ 468 (481)
+.+.|+.+|..|..|.+..+..++++|.-.|. .+...+..+..|-+-.-.+ ...++.+.
T Consensus 682 ~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv--------------------~~~~~vypde~H~is~~~~~~~~~~~~~ 741 (755)
T KOG2100|consen 682 TPKLLLIHGTEDDNVHFQQSAILIKALQNAGV--------------------PFRLLVYPDENHGISYVEVISHLYEKLD 741 (755)
T ss_pred cCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCC--------------------ceEEEEeCCCCcccccccchHHHHHHHH
Confidence 35589999999999999999999999985555 2577888999998876554 56677777
Q ss_pred HHHc
Q 044068 469 SFLD 472 (481)
Q Consensus 469 ~fl~ 472 (481)
+|+.
T Consensus 742 ~~~~ 745 (755)
T KOG2100|consen 742 RFLR 745 (755)
T ss_pred HHHH
Confidence 7776
No 78
>COG0400 Predicted esterase [General function prediction only]
Probab=96.58 E-value=0.042 Score=52.20 Aligned_cols=59 Identities=22% Similarity=0.315 Sum_probs=44.0
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSS 469 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~ 469 (481)
+.||++.+|..|.+||...+++..+.|+=.|. +..+.++. .||.++.+- ++.+++
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~--------------------~v~~~~~~-~GH~i~~e~----~~~~~~ 200 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASGA--------------------DVEVRWHE-GGHEIPPEE----LEAARS 200 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcCC--------------------CEEEEEec-CCCcCCHHH----HHHHHH
Confidence 69999999999999999999998888763333 44555666 999997544 444444
Q ss_pred HHcC
Q 044068 470 FLDG 473 (481)
Q Consensus 470 fl~~ 473 (481)
|+.+
T Consensus 201 wl~~ 204 (207)
T COG0400 201 WLAN 204 (207)
T ss_pred HHHh
Confidence 6543
No 79
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.44 E-value=0.0095 Score=62.85 Aligned_cols=81 Identities=17% Similarity=0.072 Sum_probs=53.8
Q ss_pred ccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccC
Q 044068 158 VANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKN 237 (481)
Q Consensus 158 ~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 237 (481)
.+|||-+|-| |.|-|.-.... .+...+|+++.++|+...+.. .+.-.+++|.|+|.|||.+-.+|.+.
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a~----~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~------ 140 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTSA----AYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLT------ 140 (442)
T ss_pred CCEEEEEECC-CcCCCCCcccc----ccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhC------
Confidence 4799999975 54544211111 144678888888776544332 34457899999999999888877643
Q ss_pred CceecceeeeecCcc
Q 044068 238 QTFINLKGLAMGDAW 252 (481)
Q Consensus 238 ~~~inLkGi~IGNg~ 252 (481)
+-.+.+|++.+|.
T Consensus 141 --p~rV~rItgLDPA 153 (442)
T TIGR03230 141 --KHKVNRITGLDPA 153 (442)
T ss_pred --CcceeEEEEEcCC
Confidence 2237788877763
No 80
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=96.39 E-value=0.065 Score=60.77 Aligned_cols=101 Identities=19% Similarity=0.314 Sum_probs=65.4
Q ss_pred cCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCc--------------CCCCCCEEEE
Q 044068 150 HNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFP--------------EYKSRAFFLA 215 (481)
Q Consensus 150 ~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp--------------~~~~~~~yi~ 215 (481)
.++|=..+-++++++| .+|+|-|-+.-.. -..+..+|.++ +.+|+.... .+.+-++-++
T Consensus 271 ~~~~~~~rGYaVV~~D-~RGtg~SeG~~~~-----~~~~E~~D~~~-vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~ 343 (767)
T PRK05371 271 LNDYFLPRGFAVVYVS-GIGTRGSDGCPTT-----GDYQEIESMKA-VIDWLNGRATAYTDRTRGKEVKADWSNGKVAMT 343 (767)
T ss_pred HHHHHHhCCeEEEEEc-CCCCCCCCCcCcc-----CCHHHHHHHHH-HHHHHhhCCccccccccccccccCCCCCeeEEE
Confidence 3444444678999999 6999999875322 12333555555 444665321 1224589999
Q ss_pred cccccccccHHHHHHHHHhccCCceecceeeeecCcccCcccccchhhhhhhhcccC
Q 044068 216 GESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTETGNKGMFDFYWTHALI 272 (481)
Q Consensus 216 GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~~q~~~~~~~~~~~gli 272 (481)
|.||+|...-.+|..- +-.||.|+...|+.|. .+|.+..|++
T Consensus 344 G~SY~G~~~~~aAa~~--------pp~LkAIVp~a~is~~-------yd~yr~~G~~ 385 (767)
T PRK05371 344 GKSYLGTLPNAVATTG--------VEGLETIIPEAAISSW-------YDYYRENGLV 385 (767)
T ss_pred EEcHHHHHHHHHHhhC--------CCcceEEEeeCCCCcH-------HHHhhcCCce
Confidence 9999998877777533 3459999998887763 3444555543
No 81
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.37 E-value=0.14 Score=51.26 Aligned_cols=69 Identities=30% Similarity=0.493 Sum_probs=53.1
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCC--ccChHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVP--SSQPARALAFF 467 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP--~dqP~~al~mi 467 (481)
..||+||+|..|.++|+..++..++++-=.|. .+++|.++.+++|+.. ...| .++.-|
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~-------------------a~V~~~~~~~~~H~~~~~~~~~-~a~~Wl 278 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGG-------------------ADVEYVRYPGGGHLGAAFASAP-DALAWL 278 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCC-------------------CCEEEEecCCCChhhhhhcCcH-HHHHHH
Confidence 58999999999999999999999988653330 1689999999999965 4565 455556
Q ss_pred HHHHcCCCCCC
Q 044068 468 SSFLDGKLPPA 478 (481)
Q Consensus 468 ~~fl~~~~~~~ 478 (481)
++-+.|++.++
T Consensus 279 ~~rf~G~~~~~ 289 (290)
T PF03583_consen 279 DDRFAGKPATS 289 (290)
T ss_pred HHHHCCCCCCC
Confidence 66667777553
No 82
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.34 E-value=0.021 Score=55.39 Aligned_cols=105 Identities=17% Similarity=0.203 Sum_probs=68.2
Q ss_pred CCCeEEEEcCCCChh-hhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhH
Q 044068 112 TKPLVLWLNGGPGCS-SFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTA 190 (481)
Q Consensus 112 ~~PlvlWlnGGPGcS-Sl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A 190 (481)
..+.+|+.+|-=.-= -| .-+|.| .+=.=+.|+.=.|- -|-|.|-++..+. +.-+..
T Consensus 59 ~~~~lly~hGNa~Dlgq~-~~~~~~-----------------l~~~ln~nv~~~DY-SGyG~S~G~psE~----n~y~Di 115 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQM-VELFKE-----------------LSIFLNCNVVSYDY-SGYGRSSGKPSER----NLYADI 115 (258)
T ss_pred cceEEEEcCCcccchHHH-HHHHHH-----------------HhhcccceEEEEec-ccccccCCCcccc----cchhhH
Confidence 359999999861111 12 233333 23233567788885 9999998876542 555556
Q ss_pred HHHHHHHHHHHHHCcCC-CCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCc
Q 044068 191 ADSYTFLLNWFERFPEY-KSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 191 ~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp 255 (481)
+..|+.|++ .+ +..++.|.|.|-|-.=.-.+|.+. + +.|+++-+|+++-
T Consensus 116 ~avye~Lr~------~~g~~~~Iil~G~SiGt~~tv~Lasr~--------~--~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 116 KAVYEWLRN------RYGSPERIILYGQSIGTVPTVDLASRY--------P--LAAVVLHSPFTSG 165 (258)
T ss_pred HHHHHHHHh------hcCCCceEEEEEecCCchhhhhHhhcC--------C--cceEEEeccchhh
Confidence 677777764 44 467999999999975433444322 3 9999999887763
No 83
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=96.33 E-value=0.12 Score=50.98 Aligned_cols=119 Identities=18% Similarity=0.228 Sum_probs=75.4
Q ss_pred CCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCC--CCCccCCchhhH
Q 044068 113 KPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTS--SDYVMNGDERTA 190 (481)
Q Consensus 113 ~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~--~~~~~~~~~~~A 190 (481)
+++++|+-|=||.-.. |--|.+ .|..+- +....|+=+.. +|.-.+..... .+....+-++..
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~-----------~L~~~l---~~~~~i~~ish-~Gh~~~~~~~~~~~~~~~~sL~~QI 65 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS-----------ALYEKL---NPQFEILGISH-AGHSTSPSNSKFSPNGRLFSLQDQI 65 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH-----------HHHHhC---CCCCeeEEecC-CCCcCCcccccccCCCCccCHHHHH
Confidence 5799999999999987 665552 233221 45566666664 44433332210 011123778888
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 191 ADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 191 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
+.-++||+++....+ -.+.+++|.|||-|+..+-.+.+++.+ ...+++++++.=|.+
T Consensus 66 ~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~~-----~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 66 EHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLPD-----LKFRVKKVILLFPTI 122 (266)
T ss_pred HHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhccc-----cCCceeEEEEeCCcc
Confidence 889999999888653 246799999999998766666665541 235566665555544
No 84
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.25 E-value=0.039 Score=56.25 Aligned_cols=137 Identities=16% Similarity=0.171 Sum_probs=86.4
Q ss_pred CCceeEEEEEEe--CCC-CCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcc-cccceEEEecCCCCC
Q 044068 96 AGRALFYYFVES--QNS-STKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWN-NVANMLFLESPAGVG 171 (481)
Q Consensus 96 ~~~~lFywffes--~~p-~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~-~~anvlyiDqPvG~G 171 (481)
....++-+.|.. ..+ ..+|+|||+|||--|-+... .....+-.++. +.++.+-|= ++
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~---------------~~~y~~~~~~~a~~~~~vvvS----Vd 130 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSAN---------------SPAYDSFCTRLAAELNCVVVS----VD 130 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCC---------------CchhHHHHHHHHHHcCeEEEe----cC
Confidence 457799999977 334 68999999999987765310 01111222232 445555432 33
Q ss_pred CCCCCCCCCCccCCchhhHHHHHHHHHH-HHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecC
Q 044068 172 FSYSNTSSDYVMNGDERTAADSYTFLLN-WFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGD 250 (481)
Q Consensus 172 fSy~~~~~~~~~~~~~~~A~d~~~fL~~-f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGN 250 (481)
|--+ ++..++. .-++.-+.+.-++++ |.+..-..+ .++|+|.|-||..+-.+|.++.+.. ..++.|+|+++.-
T Consensus 131 YRLA-PEh~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~--~~~~ki~g~ili~ 204 (336)
T KOG1515|consen 131 YRLA-PEHPFPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK--LSKPKIKGQILIY 204 (336)
T ss_pred cccC-CCCCCCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc--CCCcceEEEEEEe
Confidence 3332 2233443 334444444444554 666554443 4999999999999999999998752 1368899999999
Q ss_pred cccCccc
Q 044068 251 AWIDTET 257 (481)
Q Consensus 251 g~~dp~~ 257 (481)
|++....
T Consensus 205 P~~~~~~ 211 (336)
T KOG1515|consen 205 PFFQGTD 211 (336)
T ss_pred cccCCCC
Confidence 8887654
No 85
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.22 E-value=0.017 Score=63.03 Aligned_cols=130 Identities=17% Similarity=0.110 Sum_probs=80.8
Q ss_pred CCceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCc-ccccceEEEecCCCCCCCC
Q 044068 96 AGRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAW-NNVANMLFLESPAGVGFSY 174 (481)
Q Consensus 96 ~~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW-~~~anvlyiDqPvG~GfSy 174 (481)
.+..|+...+.-.+.+..|+||.++|-...+... . +.. . ....-| .+-..++-+| ..|+|.|-
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~-~-----~~~--------~-~~~~~l~~~Gy~vv~~D-~RG~g~S~ 68 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLR-W-----GLD--------K-TEPAWFVAQGYAVVIQD-TRGRGASE 68 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhc-c-----ccc--------c-ccHHHHHhCCcEEEEEe-ccccccCC
Confidence 3567887666442344689999999754332210 0 000 0 000112 2468899999 59999997
Q ss_pred CCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccC
Q 044068 175 SNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWID 254 (481)
Q Consensus 175 ~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~d 254 (481)
+.... .+ ...++|+.++++ |+.+.|. .+.++.++|+||||...-.+|..- +-.||+++..++..|
T Consensus 69 g~~~~----~~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~--------~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 69 GEFDL----LG-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQ--------PPALRAIAPQEGVWD 133 (550)
T ss_pred CceEe----cC-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhccC--------CCceeEEeecCcccc
Confidence 54221 12 456778877554 6766653 346899999999997766665421 335999999888876
Q ss_pred cc
Q 044068 255 TE 256 (481)
Q Consensus 255 p~ 256 (481)
..
T Consensus 134 ~~ 135 (550)
T TIGR00976 134 LY 135 (550)
T ss_pred hh
Confidence 44
No 86
>PLN00021 chlorophyllase
Probab=96.19 E-value=0.012 Score=59.47 Aligned_cols=116 Identities=18% Similarity=0.195 Sum_probs=66.7
Q ss_pred CCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhh
Q 044068 110 SSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERT 189 (481)
Q Consensus 110 p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~ 189 (481)
..+.|+|||+||+.+.+.. +.-+.+ .+. +| -..++.+|-+ | ++..... .+.+.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~-y~~l~~-----------~La----s~--G~~VvapD~~-g--~~~~~~~------~~i~d 101 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSF-YSQLLQ-----------HIA----SH--GFIVVAPQLY-T--LAGPDGT------DEIKD 101 (313)
T ss_pred CCCCCEEEEECCCCCCccc-HHHHHH-----------HHH----hC--CCEEEEecCC-C--cCCCCch------hhHHH
Confidence 3568999999999776554 322221 010 11 2566777753 3 2211110 22233
Q ss_pred HHHHHHHHHHHHHH-Cc---CCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCc
Q 044068 190 AADSYTFLLNWFER-FP---EYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 190 A~d~~~fL~~f~~~-fp---~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp 255 (481)
+.++.+++.+-++. -| +...++++|+|||+||+.+-.+|.+..+.. ....+++++..+++...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~---~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS---LPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc---cccceeeEEeecccccc
Confidence 55555656554332 11 233467999999999998888886553321 13458898888887544
No 87
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.14 E-value=0.019 Score=48.17 Aligned_cols=65 Identities=22% Similarity=0.286 Sum_probs=54.5
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSS 469 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~ 469 (481)
..+||+.+|+.|.++|+.+.++..+.|. +-..+++.++||-+-...-.-+.+++.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~------------------------~s~lvt~~g~gHg~~~~~s~C~~~~v~~ 89 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP------------------------GSRLVTVDGAGHGVYAGGSPCVDKAVDD 89 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC------------------------CceEEEEeccCcceecCCChHHHHHHHH
Confidence 3899999999999999999999998876 3478999999999986554667888888
Q ss_pred HHcCCCCCC
Q 044068 470 FLDGKLPPA 478 (481)
Q Consensus 470 fl~~~~~~~ 478 (481)
|+..-.+|.
T Consensus 90 yl~~G~lP~ 98 (103)
T PF08386_consen 90 YLLDGTLPA 98 (103)
T ss_pred HHHcCCCCC
Confidence 877666665
No 88
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.12 E-value=0.039 Score=54.53 Aligned_cols=124 Identities=15% Similarity=0.232 Sum_probs=73.5
Q ss_pred CceeEEEEEEe-CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccc-----eEEEec----
Q 044068 97 GRALFYYFVES-QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVAN-----MLFLES---- 166 (481)
Q Consensus 97 ~~~lFywffes-~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~an-----vlyiDq---- 166 (481)
+.+.-||++.- .-++.+||||-|||+=|.-+- . .+-..|++.|. |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~-------------------~~~sg~d~lAd~~gFlV~yPdg~~~~ 103 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-Q-------------------LHGTGWDALADREGFLVAYPDGYDRA 103 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHH-h-------------------hcccchhhhhcccCcEEECcCccccc
Confidence 45667888866 667888999999998766543 1 12234554432 444432
Q ss_pred --CCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecce
Q 044068 167 --PAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLK 244 (481)
Q Consensus 167 --PvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLk 244 (481)
+.|.|-+|...+..- ..+ -+..+.+.+.....+| ......+||+|-|-||..+-.++...- --+.
T Consensus 104 wn~~~~~~~~~p~~~~~---g~d-dVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~p--------~~fa 170 (312)
T COG3509 104 WNANGCGNWFGPADRRR---GVD-DVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEYP--------DIFA 170 (312)
T ss_pred cCCCcccccCCcccccC---Ccc-HHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcCc--------cccc
Confidence 556666654332110 111 1223333222222333 223458999999999998888776542 2388
Q ss_pred eeeecCccc
Q 044068 245 GLAMGDAWI 253 (481)
Q Consensus 245 Gi~IGNg~~ 253 (481)
++++..|..
T Consensus 171 a~A~VAg~~ 179 (312)
T COG3509 171 AIAPVAGLL 179 (312)
T ss_pred ceeeeeccc
Confidence 999988877
No 89
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=95.97 E-value=0.028 Score=55.62 Aligned_cols=93 Identities=12% Similarity=0.138 Sum_probs=52.0
Q ss_pred cccccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHh
Q 044068 155 WNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQF 234 (481)
Q Consensus 155 W~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 234 (481)
-.+++-++.|| ++|-..--..-..+|.--+.++.|+++-+.|.. |. =+.+.-.|+--|+.....+|-.-
T Consensus 52 i~~~f~i~Hi~-aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~-f~------lk~vIg~GvGAGAnIL~rfAl~~--- 120 (283)
T PF03096_consen 52 ILQNFCIYHID-APGQEEGAATLPEGYQYPSMDQLAEMLPEVLDH-FG------LKSVIGFGVGAGANILARFALKH--- 120 (283)
T ss_dssp HHTTSEEEEEE--TTTSTT-----TT-----HHHHHCTHHHHHHH-HT---------EEEEEETHHHHHHHHHHHHS---
T ss_pred HhhceEEEEEe-CCCCCCCcccccccccccCHHHHHHHHHHHHHh-CC------ccEEEEEeeccchhhhhhccccC---
Confidence 45678899999 677766443333342223889999998886653 32 34688899887777766677543
Q ss_pred ccCCceecceeeeecCcccCcccccchhhhhhh
Q 044068 235 NKNQTFINLKGLAMGDAWIDTETGNKGMFDFYW 267 (481)
Q Consensus 235 n~~~~~inLkGi~IGNg~~dp~~q~~~~~~~~~ 267 (481)
+-.+-|+++.|+.... .+..++++
T Consensus 121 -----p~~V~GLiLvn~~~~~----~gw~Ew~~ 144 (283)
T PF03096_consen 121 -----PERVLGLILVNPTCTA----AGWMEWFY 144 (283)
T ss_dssp -----GGGEEEEEEES---S-------HHHHHH
T ss_pred -----ccceeEEEEEecCCCC----ccHHHHHH
Confidence 3348899998865543 34455444
No 90
>PRK10162 acetyl esterase; Provisional
Probab=95.56 E-value=0.033 Score=56.42 Aligned_cols=45 Identities=13% Similarity=0.007 Sum_probs=34.8
Q ss_pred CCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCc
Q 044068 209 SRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 209 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp 255 (481)
.+++.|+|+|.||+.+-.++.+..+.. ..+..++|+++..|++|.
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~~--~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDKQ--IDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhcC--CCccChhheEEECCccCC
Confidence 468999999999999999988775442 113457899998888874
No 91
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.13 E-value=0.06 Score=51.07 Aligned_cols=103 Identities=18% Similarity=0.174 Sum_probs=67.7
Q ss_pred CeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCccc-ccceEEEecCCCCCCCCCCCCCCCccCCchhhHHH
Q 044068 114 PLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNN-VANMLFLESPAGVGFSYSNTSSDYVMNGDERTAAD 192 (481)
Q Consensus 114 PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~-~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d 192 (481)
+.|+++++|=|+++. |--|.. .... ..++..|+ ..|.+- . . ... .+.++.|+.
T Consensus 1 ~~lf~~p~~gG~~~~-y~~la~------------------~l~~~~~~v~~i~-~~~~~~---~-~-~~~-~si~~la~~ 54 (229)
T PF00975_consen 1 RPLFCFPPAGGSASS-YRPLAR------------------ALPDDVIGVYGIE-YPGRGD---D-E-PPP-DSIEELASR 54 (229)
T ss_dssp -EEEEESSTTCSGGG-GHHHHH------------------HHTTTEEEEEEEC-STTSCT---T-S-HEE-SSHHHHHHH
T ss_pred CeEEEEcCCccCHHH-HHHHHH------------------hCCCCeEEEEEEe-cCCCCC---C-C-CCC-CCHHHHHHH
Confidence 358899998886654 422221 0112 46788888 466661 1 1 111 277788887
Q ss_pred HHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 193 SYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 193 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
..+.++ +..| ..|++|+|+|+||..+=.+|.++.++. ...+.+++.++..
T Consensus 55 y~~~I~---~~~~---~gp~~L~G~S~Gg~lA~E~A~~Le~~G-----~~v~~l~liD~~~ 104 (229)
T PF00975_consen 55 YAEAIR---ARQP---EGPYVLAGWSFGGILAFEMARQLEEAG-----EEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHH---HHTS---SSSEEEEEETHHHHHHHHHHHHHHHTT------SESEEEEESCSS
T ss_pred HHHHhh---hhCC---CCCeeehccCccHHHHHHHHHHHHHhh-----hccCceEEecCCC
Confidence 777665 3444 239999999999999999999987763 4578888888644
No 92
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.03 E-value=0.79 Score=49.19 Aligned_cols=89 Identities=20% Similarity=0.399 Sum_probs=64.6
Q ss_pred CcHHHHHHHHhcCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccC--
Q 044068 378 TVLPSIQELMTSGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMV-- 455 (481)
Q Consensus 378 ~~~~~l~~Ll~~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmv-- 455 (481)
..-+.|....++|=|+|+|||..|.+++..+|.++.+++.-.-... ..++..| +-|..|+|.||--
T Consensus 341 a~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~------~~~v~dF------~RlF~vPGm~HC~gG 408 (474)
T PF07519_consen 341 ATDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGA------LADVDDF------YRLFMVPGMGHCGGG 408 (474)
T ss_pred CCCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccc------cccccce------eEEEecCCCcccCCC
Confidence 3446678888899999999999999999999999998864111000 0011122 4678999999986
Q ss_pred CccChHHHHHHHHHHHcCCCCCC
Q 044068 456 PSSQPARALAFFSSFLDGKLPPA 478 (481)
Q Consensus 456 P~dqP~~al~mi~~fl~~~~~~~ 478 (481)
|-..|-.++.-|.+|+.+-.-|+
T Consensus 409 ~g~~~~d~l~aL~~WVE~G~AP~ 431 (474)
T PF07519_consen 409 PGPDPFDALTALVDWVENGKAPE 431 (474)
T ss_pred CCCCCCCHHHHHHHHHhCCCCCC
Confidence 44467788999999998765554
No 93
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=94.62 E-value=0.092 Score=50.38 Aligned_cols=49 Identities=12% Similarity=0.098 Sum_probs=34.9
Q ss_pred HHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 197 LLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 197 L~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
|.+.+......-.+.+|++|.|-||...-.++...- --+.++++..|..
T Consensus 84 lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~p--------d~faa~a~~sG~~ 132 (220)
T PF10503_consen 84 LVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYP--------DLFAAVAVVSGVP 132 (220)
T ss_pred HHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCC--------ccceEEEeecccc
Confidence 333333333455678999999999988888887653 3488888888764
No 94
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=94.61 E-value=0.082 Score=50.00 Aligned_cols=122 Identities=19% Similarity=0.310 Sum_probs=80.7
Q ss_pred ceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCC
Q 044068 98 RALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNT 177 (481)
Q Consensus 98 ~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~ 177 (481)
-.|.=|...+. .+.|++|.++|--|-- |.+.-+ .+-.==+-..||+-+|- .|-|.|-+..
T Consensus 65 vtL~a~~~~~E--~S~pTlLyfh~NAGNm----Ghr~~i-------------~~~fy~~l~mnv~ivsY-RGYG~S~Gsp 124 (300)
T KOG4391|consen 65 VTLDAYLMLSE--SSRPTLLYFHANAGNM----GHRLPI-------------ARVFYVNLKMNVLIVSY-RGYGKSEGSP 124 (300)
T ss_pred eeEeeeeeccc--CCCceEEEEccCCCcc----cchhhH-------------HHHHHHHcCceEEEEEe-eccccCCCCc
Confidence 34544444441 2789999999876652 222210 00001134578999994 9999998776
Q ss_pred CCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCc
Q 044068 178 SSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 178 ~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp 255 (481)
.+.-.. .|.+++ .+++...|...++++.+.|.|-||.-+-++|++-.+ .+.++++-|-+++-
T Consensus 125 sE~GL~-lDs~av-------ldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--------ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 125 SEEGLK-LDSEAV-------LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--------RISAIIVENTFLSI 186 (300)
T ss_pred ccccee-ccHHHH-------HHHHhcCccCCcceEEEEecccCCeeEEEeeccchh--------heeeeeeechhccc
Confidence 543221 333332 334457889999999999999999999999886644 38999999977764
No 95
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.53 E-value=0.9 Score=43.94 Aligned_cols=59 Identities=17% Similarity=0.224 Sum_probs=47.8
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSS 469 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~ 469 (481)
..+|.++.|+.|.+|...-...|-+..+ +.++ ..+...|||-+.+|.+.....|.+
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~-----------------------~~f~-l~~fdGgHFfl~~~~~~v~~~i~~ 231 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK-----------------------GDFT-LRVFDGGHFFLNQQREEVLARLEQ 231 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc-----------------------CCce-EEEecCcceehhhhHHHHHHHHHH
Confidence 5899999999999999998888876533 1334 445567999999999999999988
Q ss_pred HHc
Q 044068 470 FLD 472 (481)
Q Consensus 470 fl~ 472 (481)
.+.
T Consensus 232 ~l~ 234 (244)
T COG3208 232 HLA 234 (244)
T ss_pred Hhh
Confidence 875
No 96
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=93.99 E-value=0.38 Score=45.14 Aligned_cols=61 Identities=13% Similarity=0.041 Sum_probs=45.9
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSS 469 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~ 469 (481)
.+++||.+|..|..|+-... -||..+. ..-.+-.....+|....--|++...++..
T Consensus 216 kcPtli~hG~kDp~~~~~hv-~fi~~~~-----------------------~~a~~~~~peGkHn~hLrya~eFnklv~d 271 (277)
T KOG2984|consen 216 KCPTLIMHGGKDPFCGDPHV-CFIPVLK-----------------------SLAKVEIHPEGKHNFHLRYAKEFNKLVLD 271 (277)
T ss_pred cCCeeEeeCCcCCCCCCCCc-cchhhhc-----------------------ccceEEEccCCCcceeeechHHHHHHHHH
Confidence 59999999999999987643 2332221 11244667889999999999999999999
Q ss_pred HHcCC
Q 044068 470 FLDGK 474 (481)
Q Consensus 470 fl~~~ 474 (481)
|++..
T Consensus 272 Fl~~~ 276 (277)
T KOG2984|consen 272 FLKST 276 (277)
T ss_pred HHhcc
Confidence 98653
No 97
>PRK07868 acyl-CoA synthetase; Validated
Probab=93.97 E-value=0.45 Score=55.89 Aligned_cols=61 Identities=15% Similarity=0.145 Sum_probs=48.3
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEE-EEEcCCCccCCc---cChHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTF-VAIRGAGHMVPS---SQPARALA 465 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf-~~V~~AGHmvP~---dqP~~al~ 465 (481)
..|+|++.|+.|.++|....+.+.+.+. +..+ ..+.++|||.++ .-|+....
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~------------------------~a~~~~~~~~~GH~g~~~g~~a~~~~wp 352 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP------------------------NAEVYESLIRAGHFGLVVGSRAAQQTWP 352 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEEeCCCCCEeeeechhhhhhhCh
Confidence 5899999999999999999998877654 3344 567899999665 35667778
Q ss_pred HHHHHHcCC
Q 044068 466 FFSSFLDGK 474 (481)
Q Consensus 466 mi~~fl~~~ 474 (481)
.|.+||...
T Consensus 353 ~i~~wl~~~ 361 (994)
T PRK07868 353 TVADWVKWL 361 (994)
T ss_pred HHHHHHHHh
Confidence 888898743
No 98
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=93.69 E-value=0.12 Score=44.81 Aligned_cols=92 Identities=17% Similarity=0.231 Sum_probs=58.0
Q ss_pred eEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcc-cccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHH
Q 044068 115 LVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWN-NVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADS 193 (481)
Q Consensus 115 lvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~-~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~ 193 (481)
+||++||+.|.+.. +..+.+ .+. +-.+++.+|. .|.|.+.. ...++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~------------------~l~~~G~~v~~~~~-~~~~~~~~-----------~~~~~~~ 49 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAE------------------ALAEQGYAVVAFDY-PGHGDSDG-----------ADAVERV 49 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHH------------------HHHHTTEEEEEESC-TTSTTSHH-----------SHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHHH------------------HHHHCCCEEEEEec-CCCCccch-----------hHHHHHH
Confidence 68999999886655 433332 122 2367888884 66665511 1133333
Q ss_pred HHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCc
Q 044068 194 YTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDA 251 (481)
Q Consensus 194 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg 251 (481)
.+.+. +.++ ..++++|+|+|.||..+..++.+- -.+++++..+|
T Consensus 50 ~~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~---------~~v~~~v~~~~ 93 (145)
T PF12695_consen 50 LADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN---------PRVKAVVLLSP 93 (145)
T ss_dssp HHHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS---------TTESEEEEESE
T ss_pred HHHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc---------cceeEEEEecC
Confidence 33332 3223 467999999999999888877633 23889888887
No 99
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=93.43 E-value=0.36 Score=50.14 Aligned_cols=132 Identities=20% Similarity=0.310 Sum_probs=81.3
Q ss_pred EeEEEecCCCCceeEEEEEEe--C---CCCCCCeEEEEcCCCChhhhh-----hhhhhhcCCeEEcCCCCccccCCcCcc
Q 044068 87 SGYVTVDPKAGRALFYYFVES--Q---NSSTKPLVLWLNGGPGCSSFG-----FGAMMELGPFRVNSDGKSLSHNEYAWN 156 (481)
Q Consensus 87 sGyl~v~~~~~~~lFywffes--~---~p~~~PlvlWlnGGPGcSSl~-----~g~f~E~GP~~~~~~~~~l~~n~~sW~ 156 (481)
.=+|...+ .|.-..=|+... + +..++|+||.|.|=.|.|.-. ....++.| +++ .+.|
T Consensus 95 Reii~~~D-GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~------VVfN----- 161 (409)
T KOG1838|consen 95 REIIKTSD-GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRV------VVFN----- 161 (409)
T ss_pred eEEEEeCC-CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEE------EEEC-----
Confidence 44566554 244455566555 2 246789999999999988521 23455556 432 1222
Q ss_pred cccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhcc
Q 044068 157 NVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNK 236 (481)
Q Consensus 157 ~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 236 (481)
+.|-|.|--++..-|.. .. .+|+-++++---++|| .+++|.+|.|+||..+- +++-+..+
T Consensus 162 ----------~RG~~g~~LtTpr~f~a-g~---t~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~iL~---nYLGE~g~ 221 (409)
T KOG1838|consen 162 ----------HRGLGGSKLTTPRLFTA-GW---TEDLREVVNHIKKRYP---QAPLFAVGFSMGGNILT---NYLGEEGD 221 (409)
T ss_pred ----------CCCCCCCccCCCceeec-CC---HHHHHHHHHHHHHhCC---CCceEEEEecchHHHHH---HHhhhccC
Confidence 79999887766554432 22 3455555554446788 57999999999997643 33333321
Q ss_pred CCceecceeeeecCccc
Q 044068 237 NQTFINLKGLAMGDAWI 253 (481)
Q Consensus 237 ~~~~inLkGi~IGNg~~ 253 (481)
..++ ..|++|-|||-
T Consensus 222 -~~~l-~~a~~v~~Pwd 236 (409)
T KOG1838|consen 222 -NTPL-IAAVAVCNPWD 236 (409)
T ss_pred -CCCc-eeEEEEeccch
Confidence 1223 78888888875
No 100
>COG1647 Esterase/lipase [General function prediction only]
Probab=93.37 E-value=0.5 Score=45.00 Aligned_cols=61 Identities=21% Similarity=0.370 Sum_probs=49.5
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccC-hHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQ-PARALAFFS 468 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dq-P~~al~mi~ 468 (481)
-++++|.+|..|-++|..+.....+.+.-..+ ...+..++||-+-.|. .+...+-+-
T Consensus 181 ~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~K----------------------eL~~~e~SgHVIt~D~Erd~v~e~V~ 238 (243)
T COG1647 181 YSPTLVVQGRQDEMVPAESANFIYDHVESDDK----------------------ELKWLEGSGHVITLDKERDQVEEDVI 238 (243)
T ss_pred ccchhheecccCCCCCHHHHHHHHHhccCCcc----------------------eeEEEccCCceeecchhHHHHHHHHH
Confidence 48999999999999999999999998773333 5678899999999985 556666677
Q ss_pred HHHc
Q 044068 469 SFLD 472 (481)
Q Consensus 469 ~fl~ 472 (481)
+|+.
T Consensus 239 ~FL~ 242 (243)
T COG1647 239 TFLE 242 (243)
T ss_pred HHhh
Confidence 7775
No 101
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=93.22 E-value=0.4 Score=52.04 Aligned_cols=56 Identities=14% Similarity=0.094 Sum_probs=43.0
Q ss_pred HHHHHHHHhcCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccC
Q 044068 380 LPSIQELMTSGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMV 455 (481)
Q Consensus 380 ~~~l~~Ll~~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmv 455 (481)
.-.++.|-+...|.|+.+|-.|--|-+..|.+.+..|.=.|+ .-...++++--|++
T Consensus 792 ~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagK--------------------pyeL~IfP~ERHsi 847 (867)
T KOG2281|consen 792 AGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGK--------------------PYELQIFPNERHSI 847 (867)
T ss_pred HHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCC--------------------ceEEEEcccccccc
Confidence 344555556678999999999999999999999999874443 23557778888876
No 102
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=92.48 E-value=0.14 Score=50.44 Aligned_cols=84 Identities=20% Similarity=0.212 Sum_probs=59.6
Q ss_pred ccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccC
Q 044068 158 VANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKN 237 (481)
Q Consensus 158 ~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 237 (481)
=..+|.+| ..|+|-|.+.-.. ...+-++|.++ +.+|+...|--. -++-++|.||+|......|..-
T Consensus 57 GY~vV~~D-~RG~g~S~G~~~~-----~~~~e~~D~~d-~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~------ 122 (272)
T PF02129_consen 57 GYAVVVQD-VRGTGGSEGEFDP-----MSPNEAQDGYD-TIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARR------ 122 (272)
T ss_dssp T-EEEEEE--TTSTTS-S-B-T-----TSHHHHHHHHH-HHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT------
T ss_pred CCEEEEEC-CcccccCCCcccc-----CChhHHHHHHH-HHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcC------
Confidence 46789999 6999999876432 14556778887 667888776543 4799999999999888888633
Q ss_pred CceecceeeeecCcccCccc
Q 044068 238 QTFINLKGLAMGDAWIDTET 257 (481)
Q Consensus 238 ~~~inLkGi~IGNg~~dp~~ 257 (481)
+-.||.|+...+..|...
T Consensus 123 --~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 --PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---TTEEEEEEESE-SBTCC
T ss_pred --CCCceEEEecccCCcccc
Confidence 445999999988887654
No 103
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=92.05 E-value=2.2 Score=43.40 Aligned_cols=56 Identities=18% Similarity=0.205 Sum_probs=38.2
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccC-hHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQ-PARALAFFS 468 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dq-P~~al~mi~ 468 (481)
..+|++-.|-.|.+||..++-+..++|.=+ =.....+..||-.+.+. -++.++.++
T Consensus 262 ~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~-----------------------K~l~vyp~~~He~~~~~~~~~~~~~l~ 318 (320)
T PF05448_consen 262 KCPVLFSVGLQDPVCPPSTQFAAYNAIPGP-----------------------KELVVYPEYGHEYGPEFQEDKQLNFLK 318 (320)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHCC--SS-----------------------EEEEEETT--SSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCCCCchhHHHHHhccCCC-----------------------eeEEeccCcCCCchhhHHHHHHHHHHh
Confidence 489999999999999999999999887611 16688899999887665 555555443
No 104
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=91.33 E-value=0.12 Score=53.89 Aligned_cols=82 Identities=18% Similarity=0.115 Sum_probs=54.4
Q ss_pred cccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhcc
Q 044068 157 NVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNK 236 (481)
Q Consensus 157 ~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 236 (481)
+-.+||=|| =+|+|+|.... + +.+ .+.++..+.+|+..-|+.-...+.++|-|.||.|++.+|..=.
T Consensus 217 rGiA~LtvD-mPG~G~s~~~~---l---~~D--~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~---- 283 (411)
T PF06500_consen 217 RGIAMLTVD-MPGQGESPKWP---L---TQD--SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALED---- 283 (411)
T ss_dssp CT-EEEEE---TTSGGGTTT----S----S---CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTT----
T ss_pred CCCEEEEEc-cCCCcccccCC---C---CcC--HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcc----
Confidence 456899999 59999985321 1 111 2346666777888899998899999999999999999986321
Q ss_pred CCceecceeeeecCcccCc
Q 044068 237 NQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 237 ~~~~inLkGi~IGNg~~dp 255 (481)
-.|||++.-.|.++-
T Consensus 284 ----~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 284 ----PRLKAVVALGAPVHH 298 (411)
T ss_dssp ----TT-SEEEEES---SC
T ss_pred ----cceeeEeeeCchHhh
Confidence 238998777766653
No 105
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=91.29 E-value=0.37 Score=45.67 Aligned_cols=59 Identities=27% Similarity=0.396 Sum_probs=41.8
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSS 469 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~ 469 (481)
+.+|++.+|+.|.++|....+...+.|+=.+ .+++|.++.|.||-++ .+.++.+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~--------------------~~v~~~~~~g~gH~i~----~~~~~~~~~ 210 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAG--------------------ANVEFHEYPGGGHEIS----PEELRDLRE 210 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT---------------------GEEEEEETT-SSS------HHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcC--------------------CCEEEEEcCCCCCCCC----HHHHHHHHH
Confidence 4899999999999999998888877775111 1689999999999996 455666666
Q ss_pred HHc
Q 044068 470 FLD 472 (481)
Q Consensus 470 fl~ 472 (481)
||.
T Consensus 211 ~l~ 213 (216)
T PF02230_consen 211 FLE 213 (216)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 106
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=91.26 E-value=0.39 Score=51.48 Aligned_cols=38 Identities=16% Similarity=0.195 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHH
Q 044068 191 ADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVAL 229 (481)
Q Consensus 191 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 229 (481)
...++++++-...|. -..+++.|+|||.||+.+-.++.
T Consensus 158 ~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 158 RLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLLL 195 (493)
T ss_pred HHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHhh
Confidence 334455665555553 24568999999999986655443
No 107
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=90.99 E-value=0.41 Score=41.41 Aligned_cols=46 Identities=30% Similarity=0.430 Sum_probs=36.6
Q ss_pred HHhcCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCcc
Q 044068 386 LMTSGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHM 454 (481)
Q Consensus 386 Ll~~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHm 454 (481)
+-...+||++.+|+.|.+++....+.+.++++ .+-++..|.|++|+
T Consensus 100 ~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 LAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-----------------------GPKELYIIPGAGHF 145 (145)
T ss_dssp HTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-----------------------SSEEEEEETTS-TT
T ss_pred hhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-----------------------CCcEEEEeCCCcCc
Confidence 33446899999999999999999999888876 13378999999996
No 108
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=90.79 E-value=7.3 Score=38.86 Aligned_cols=63 Identities=24% Similarity=0.325 Sum_probs=47.6
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSS 469 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~ 469 (481)
..|||++.|+.-.-+. .+...-.+|+= .+-|++.|.++|-++..+||.+..+-++-
T Consensus 246 kc~vllvvGd~Sp~~~--~vv~~n~~Ldp----------------------~~ttllk~~d~g~l~~e~qP~kl~ea~~~ 301 (326)
T KOG2931|consen 246 KCPVLLVVGDNSPHVS--AVVECNSKLDP----------------------TYTTLLKMADCGGLVQEEQPGKLAEAFKY 301 (326)
T ss_pred cccEEEEecCCCchhh--hhhhhhcccCc----------------------ccceEEEEcccCCcccccCchHHHHHHHH
Confidence 5899999999754332 12222234441 23589999999999999999999999999
Q ss_pred HHcCCCC
Q 044068 470 FLDGKLP 476 (481)
Q Consensus 470 fl~~~~~ 476 (481)
|+.|..+
T Consensus 302 FlqG~Gy 308 (326)
T KOG2931|consen 302 FLQGMGY 308 (326)
T ss_pred HHccCCc
Confidence 9999774
No 109
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.60 E-value=0.33 Score=46.95 Aligned_cols=102 Identities=20% Similarity=0.398 Sum_probs=52.1
Q ss_pred CCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhH
Q 044068 111 STKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTA 190 (481)
Q Consensus 111 ~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A 190 (481)
+++|+++|+-|-||-++. | +|.|==....- ..+.| -|+ ..++=..+.|.-+=-+-+....+. .+-++..
T Consensus 27 ~~~~li~~IpGNPG~~gF-Y---~~F~~~L~~~l---~~r~~-~wt-Ish~~H~~~P~sl~~~~s~~~~ei--fsL~~QV 95 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF-Y---TEFARHLHLNL---IDRLP-VWT-ISHAGHALMPASLREDHSHTNEEI--FSLQDQV 95 (301)
T ss_pred CCceEEEEecCCCCchhH-H---HHHHHHHHHhc---ccccc-eeE-EeccccccCCcccccccccccccc--cchhhHH
Confidence 789999999999999765 4 33332110000 00011 232 111112233411111111111111 2555666
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHH
Q 044068 191 ADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVA 228 (481)
Q Consensus 191 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 228 (481)
+.=.+|++++.- +++++||.|||-|...+-.+-
T Consensus 96 ~HKlaFik~~~P-----k~~ki~iiGHSiGaYm~Lqil 128 (301)
T KOG3975|consen 96 DHKLAFIKEYVP-----KDRKIYIIGHSIGAYMVLQIL 128 (301)
T ss_pred HHHHHHHHHhCC-----CCCEEEEEecchhHHHHHHHh
Confidence 666777776654 378999999999875544433
No 110
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=90.46 E-value=3.8 Score=39.11 Aligned_cols=180 Identities=17% Similarity=0.128 Sum_probs=105.8
Q ss_pred eEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCce
Q 044068 161 MLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTF 240 (481)
Q Consensus 161 vlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~ 240 (481)
.+-+| =.|-|-|-++-..+ +-...|+|+...+|-|-. ...-=-.|.|||=||--+--.|.++++- +.-
T Consensus 65 ~fRfD-F~GnGeS~gsf~~G----n~~~eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ya~K~~d~---~~v 132 (269)
T KOG4667|consen 65 AFRFD-FSGNGESEGSFYYG----NYNTEADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLLYASKYHDI---RNV 132 (269)
T ss_pred EEEEE-ecCCCCcCCccccC----cccchHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHHHHHhhcCc---hhe
Confidence 45567 58888886542221 223346999987775543 1111245789999999999999998762 225
Q ss_pred ecceeeeecCcccCcccccchhhhhhhhcccCCHHHHHhhhhcccCCcChHHHHHHHHHHHHhcCCCcccccccc-CCCC
Q 044068 241 INLKGLAMGDAWIDTETGNKGMFDFYWTHALISDEVIHGINSNCNFTKFSKACASYLIKAYESMGNINILDIYAP-LCSS 319 (481)
Q Consensus 241 inLkGi~IGNg~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~C~~~~~~~~~~~g~~n~ydi~~~-~c~~ 319 (481)
||+.|=..+-+.+.-..+ +.+.++.-+.|.|+ .-+ |+. .|
T Consensus 133 iNcsGRydl~~~I~eRlg-~~~l~~ike~Gfid-----------------------------------~~~-rkG~y~-- 173 (269)
T KOG4667|consen 133 INCSGRYDLKNGINERLG-EDYLERIKEQGFID-----------------------------------VGP-RKGKYG-- 173 (269)
T ss_pred EEcccccchhcchhhhhc-ccHHHHHHhCCcee-----------------------------------cCc-ccCCcC--
Confidence 777665555444432211 12233322333322 100 000 00
Q ss_pred CCCCCCCCCCCCCchhHHHhhcCcHHHHHhhccCCCCCcccccccChhhhhhcccCCCCcHHHHHHHHhcCceEEEEeCC
Q 044068 320 SFSTSSVLPFDPCSEIYVHSYLNSPQVQKSLHANVTGIRGPWQDCSDTVLRHWKDSPLTVLPSIQELMTSGISVYIYSGD 399 (481)
Q Consensus 320 ~~~~~~~~~~~~c~~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~l~~Ll~~~irVliy~Gd 399 (481)
..-...-+..+||..-+++-+.+ +...|||-.+|-
T Consensus 174 ----------~rvt~eSlmdrLntd~h~aclkI-----------------------------------d~~C~VLTvhGs 208 (269)
T KOG4667|consen 174 ----------YRVTEESLMDRLNTDIHEACLKI-----------------------------------DKQCRVLTVHGS 208 (269)
T ss_pred ----------ceecHHHHHHHHhchhhhhhcCc-----------------------------------CccCceEEEecc
Confidence 00011234455554444443332 236899999999
Q ss_pred CCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccCh
Q 044068 400 TDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQP 460 (481)
Q Consensus 400 ~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP 460 (481)
.|-|||......+.+.+. |=.+-.|.||-|.---+|-
T Consensus 209 ~D~IVPve~AkefAk~i~------------------------nH~L~iIEgADHnyt~~q~ 245 (269)
T KOG4667|consen 209 EDEIVPVEDAKEFAKIIP------------------------NHKLEIIEGADHNYTGHQS 245 (269)
T ss_pred CCceeechhHHHHHHhcc------------------------CCceEEecCCCcCccchhh
Confidence 999999999999998876 3367889999998655553
No 111
>PLN02454 triacylglycerol lipase
Probab=90.44 E-value=0.6 Score=48.77 Aligned_cols=69 Identities=14% Similarity=0.233 Sum_probs=51.9
Q ss_pred chhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCc
Q 044068 186 DERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 186 ~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp 255 (481)
...+.+++...+++..+++|.++ -.++|+|||.||-.+-..|..|.........+++..+..|.|-+..
T Consensus 205 ~~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 205 KLSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcccC
Confidence 34678899999999999888653 2599999999999999999888765211124557778888876643
No 112
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=90.14 E-value=0.47 Score=45.00 Aligned_cols=59 Identities=17% Similarity=0.108 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCccc
Q 044068 189 TAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTET 257 (481)
Q Consensus 189 ~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~~ 257 (481)
.++.+.+++.+..+.. ...++++|.|-|-||...-.++.+. +-.+.|++.-+|++-+..
T Consensus 86 s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~--------p~~~~gvv~lsG~~~~~~ 144 (216)
T PF02230_consen 86 SAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRY--------PEPLAGVVALSGYLPPES 144 (216)
T ss_dssp HHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCT--------SSTSSEEEEES---TTGC
T ss_pred HHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHc--------CcCcCEEEEeeccccccc
Confidence 3344444444443322 4567899999999999888887543 346999999999886543
No 113
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=89.22 E-value=0.68 Score=40.25 Aligned_cols=62 Identities=16% Similarity=0.264 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 188 RTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
...+.+.+.|++..+++| ..++.|+|||-||-.+..+|..+.++.. ....+++-+.-|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~-~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGP-SSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTT-TSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhccc-ccccceeeeecCCccc
Confidence 344566677777777666 5689999999999999999999987643 1246677777777655
No 114
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=88.55 E-value=0.72 Score=43.03 Aligned_cols=65 Identities=18% Similarity=0.215 Sum_probs=47.3
Q ss_pred hhhHHHHHHHHHHHHHH--CcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCc
Q 044068 187 ERTAADSYTFLLNWFER--FPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~~--fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp 255 (481)
.+..+|+.++++-..+. --.+..++++|+|+|-||+.+-.++.++.+.. ...++++++..|++|.
T Consensus 46 p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~----~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 46 PAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRG----LPKPKGIILISPWTDL 112 (211)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT----TCHESEEEEESCHSST
T ss_pred cccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhc----ccchhhhhcccccccc
Confidence 34566666655543432 01245678999999999999999998887753 2339999999999887
No 115
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=87.58 E-value=1.6 Score=46.13 Aligned_cols=99 Identities=17% Similarity=0.114 Sum_probs=63.4
Q ss_pred cccceEEEecCCCCCCCCCCCC---CCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHH
Q 044068 157 NVANMLFLESPAGVGFSYSNTS---SDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQ 233 (481)
Q Consensus 157 ~~anvlyiDqPvG~GfSy~~~~---~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 233 (481)
-.|-||++++ +=-|-|..... ....--+.+++.+|+..|++.+-.++....+.|+.++|-||||..+.-+-.+..
T Consensus 58 ~~a~~v~lEH-RyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP- 135 (434)
T PF05577_consen 58 FGALVVALEH-RYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP- 135 (434)
T ss_dssp HTEEEEEE---TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T-
T ss_pred cCCcEEEeeh-hhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC-
Confidence 3578899996 88888863211 111113889999999999998887776667789999999999987766665552
Q ss_pred hccCCceecceeeeecCcccCcccccchhhh
Q 044068 234 FNKNQTFINLKGLAMGDAWIDTETGNKGMFD 264 (481)
Q Consensus 234 ~n~~~~~inLkGi~IGNg~~dp~~q~~~~~~ 264 (481)
--+.|.+--.+.+....++..|.+
T Consensus 136 -------~~~~ga~ASSapv~a~~df~~y~~ 159 (434)
T PF05577_consen 136 -------HLFDGAWASSAPVQAKVDFWEYFE 159 (434)
T ss_dssp -------TT-SEEEEET--CCHCCTTTHHHH
T ss_pred -------CeeEEEEeccceeeeecccHHHHH
Confidence 226677777777777666555544
No 116
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=87.27 E-value=1.3 Score=39.45 Aligned_cols=44 Identities=16% Similarity=0.208 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHh
Q 044068 188 RTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQF 234 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 234 (481)
.+++.+...+++....+| ..+++|+|||.||..+-.+|.++.++
T Consensus 9 ~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 9 SLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 345555566666555556 56899999999999999999888664
No 117
>COG4099 Predicted peptidase [General function prediction only]
Probab=86.61 E-value=9.4 Score=38.20 Aligned_cols=53 Identities=11% Similarity=-0.000 Sum_probs=36.2
Q ss_pred HHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccC
Q 044068 194 YTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWID 254 (481)
Q Consensus 194 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~d 254 (481)
.+.+.+=+..++..-.+.+|++|-|-||.-.-+++.+..+ -+.+.+...|--|
T Consensus 253 idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--------fFAaa~~iaG~~d 305 (387)
T COG4099 253 IDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--------FFAAAVPIAGGGD 305 (387)
T ss_pred HHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--------hhheeeeecCCCc
Confidence 3434434445666677899999999999887777766533 3777776666444
No 118
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=86.04 E-value=0.95 Score=43.78 Aligned_cols=66 Identities=8% Similarity=0.062 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhcc-CCceecceeeeecCcccCcc
Q 044068 188 RTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNK-NQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~-~~~~inLkGi~IGNg~~dp~ 256 (481)
..+.++.+||+...+.. ..++++|.+||+|+..+-..-..+..... ....-+|..+++.+|-+|..
T Consensus 74 ~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 74 FSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHH
Confidence 34455555554443321 36789999999999988887777766542 12234788999999888764
No 119
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=85.72 E-value=1.6 Score=41.69 Aligned_cols=60 Identities=13% Similarity=0.195 Sum_probs=43.0
Q ss_pred hhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 188 RTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
.+.+++...+++..+++| +.+++++|||.||-.+-.+|..+.++. ...+++.+..|.|-+
T Consensus 109 ~~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~---~~~~i~~~tFg~P~v 168 (229)
T cd00519 109 SLYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG---PGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC---CCCceEEEEeCCCCC
Confidence 344445555666666555 568999999999999998888886652 235578888888765
No 120
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=85.46 E-value=1.5 Score=43.95 Aligned_cols=45 Identities=18% Similarity=0.181 Sum_probs=37.8
Q ss_pred CCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCccc
Q 044068 209 SRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTET 257 (481)
Q Consensus 209 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~~ 257 (481)
.+++.++|+|-||+.+-.++....+.. ....++.++.-|++|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~----~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRG----LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcC----CCCceEEEEEecccCCcc
Confidence 578999999999999999999887652 344788899999998875
No 121
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=85.26 E-value=1 Score=42.15 Aligned_cols=42 Identities=21% Similarity=0.239 Sum_probs=33.0
Q ss_pred CCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcccc
Q 044068 206 EYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTETG 258 (481)
Q Consensus 206 ~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~~q 258 (481)
++....+.|.|.|.||.|+-.+|.+. +++. ++.||.+.|...
T Consensus 55 ~~~~~~~~liGSSlGG~~A~~La~~~----------~~~a-vLiNPav~p~~~ 96 (187)
T PF05728_consen 55 ELKPENVVLIGSSLGGFYATYLAERY----------GLPA-VLINPAVRPYEL 96 (187)
T ss_pred hCCCCCeEEEEEChHHHHHHHHHHHh----------CCCE-EEEcCCCCHHHH
Confidence 34455699999999999999999766 2555 778999988754
No 122
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=84.03 E-value=4 Score=42.98 Aligned_cols=36 Identities=14% Similarity=0.082 Sum_probs=27.3
Q ss_pred CCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 210 RAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 210 ~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
....|+|.||||.-+-.+|.+-. -.+.+++...|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~P--------d~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWP--------ERFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCc--------ccccEEEEeccce
Confidence 46899999999988888776543 3378888777754
No 123
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=83.21 E-value=5.4 Score=48.03 Aligned_cols=104 Identities=14% Similarity=0.186 Sum_probs=67.3
Q ss_pred CCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhHH
Q 044068 112 TKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAA 191 (481)
Q Consensus 112 ~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~ 191 (481)
+.|.++.++|+.|.+.. |..+.+ .......++-+|. .|.|-+. ... .+.++.|+
T Consensus 1067 ~~~~l~~lh~~~g~~~~-~~~l~~------------------~l~~~~~v~~~~~-~g~~~~~---~~~---~~l~~la~ 1120 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQ-FSVLSR------------------YLDPQWSIYGIQS-PRPDGPM---QTA---TSLDEVCE 1120 (1296)
T ss_pred CCCCeEEecCCCCchHH-HHHHHH------------------hcCCCCcEEEEEC-CCCCCCC---CCC---CCHHHHHH
Confidence 34678999999887765 533331 1123467778886 4665431 111 26677888
Q ss_pred HHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcc
Q 044068 192 DSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAW 252 (481)
Q Consensus 192 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~ 252 (481)
++.+.++. ..| ..+++|.|+|+||..+-.+|.++.+. ...+..+++.++.
T Consensus 1121 ~~~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~-----~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1121 AHLATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRAR-----GEEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHc-----CCceeEEEEecCC
Confidence 87777764 222 35899999999999999999887554 2346666665543
No 124
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=82.24 E-value=2.3 Score=44.26 Aligned_cols=63 Identities=19% Similarity=0.219 Sum_probs=48.9
Q ss_pred hhHHHHHHHHHHHHHHCcCCCC-CCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcccc
Q 044068 188 RTAADSYTFLLNWFERFPEYKS-RAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTETG 258 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~~q 258 (481)
..|.|...+|..-.++||.... .|..+.|.|||| |+..++.+|. |-.+.||+=-.+++-|..+
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a-------P~~~~~~iDns~~~~p~l~ 224 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA-------PWLFDGVIDNSSYALPPLR 224 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC-------ccceeEEEecCccccchhh
Confidence 5789999999999999999985 789999999988 5566666662 4557777777777766543
No 125
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=82.00 E-value=2.8 Score=44.51 Aligned_cols=55 Identities=11% Similarity=0.109 Sum_probs=38.6
Q ss_pred CCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHH
Q 044068 167 PAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALT 230 (481)
Q Consensus 167 PvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 230 (481)
-.|.||++-.. . ..++..+++.+.+++.++..+ .+++.|.|||+||.++-.++..
T Consensus 128 L~g~gYDwR~~-~-----~~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 128 LFGFGYDFRQS-N-----RLPETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred cccCCCCcccc-c-----cHHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 46666665321 0 234567788888888887543 6799999999999887776654
No 126
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=81.79 E-value=4.4 Score=46.05 Aligned_cols=98 Identities=13% Similarity=0.151 Sum_probs=58.5
Q ss_pred CCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCC-CCCC--------CC--CC
Q 044068 113 KPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFS-YSNT--------SS--DY 181 (481)
Q Consensus 113 ~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfS-y~~~--------~~--~~ 181 (481)
.|+|+++||=.|.... +-.+.+ .+. .+-..+|-+|. +|.|-| .... .. .|
T Consensus 449 ~P~VVllHG~~g~~~~-~~~lA~-----------~La------~~Gy~VIaiDl-pGHG~S~~~~~~~~~~a~~~~~~~y 509 (792)
T TIGR03502 449 WPVVIYQHGITGAKEN-ALAFAG-----------TLA------AAGVATIAIDH-PLHGARSFDANASGVNATNANVLAY 509 (792)
T ss_pred CcEEEEeCCCCCCHHH-HHHHHH-----------HHH------hCCcEEEEeCC-CCCCccccccccccccccccCccce
Confidence 5899999997776654 322221 111 02245777884 777877 3210 11 01
Q ss_pred c--------cCCchhhHHHHHHHHHHHHH----------HCcCCCCCCEEEEcccccccccHHHHHH
Q 044068 182 V--------MNGDERTAADSYTFLLNWFE----------RFPEYKSRAFFLAGESYAGHYIPQVALT 230 (481)
Q Consensus 182 ~--------~~~~~~~A~d~~~fL~~f~~----------~fp~~~~~~~yi~GESYgG~yvP~lA~~ 230 (481)
- +.+..+...|+..... .+. .+..+...++++.|||.||..+..++..
T Consensus 510 ~Nl~~l~~aRDn~rQ~v~Dll~L~~-~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 510 MNLASLLVARDNLRQSILDLLGLRL-SLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred eccccccccccCHHHHHHHHHHHHH-HHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 0 1155777888877433 333 1223557799999999999999888853
No 127
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=81.57 E-value=1.8 Score=41.09 Aligned_cols=45 Identities=16% Similarity=0.190 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHh
Q 044068 188 RTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQF 234 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 234 (481)
-+-.|+.++...|++.+++ +|||+|+|||=|+..+-.|-+...+.
T Consensus 75 ~ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~~ 119 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIAG 119 (207)
T ss_pred hhHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhcC
Confidence 3457888889999998764 89999999999999887776665544
No 128
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=80.93 E-value=2 Score=44.61 Aligned_cols=67 Identities=27% Similarity=0.383 Sum_probs=44.6
Q ss_pred ccceEEEec-------CCCCCCCCCCCC-CCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHH
Q 044068 158 VANMLFLES-------PAGVGFSYSNTS-SDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVA 228 (481)
Q Consensus 158 ~anvlyiDq-------PvG~GfSy~~~~-~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 228 (481)
.|-|+|++. |.|.- ||.+.. -.|- +.+|+-.|+.+ |..++++..-=+..++..+|-||||+...-+-
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL--tseQALADfA~-ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfR 185 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL--TSEQALADFAE-LLTFLKRDLSAEASPVIAFGGSYGGMLAAWFR 185 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccc--cHHHHHHHHHH-HHHHHhhccccccCcEEEecCchhhHHHHHHH
Confidence 577888884 67766 554322 2343 67777777766 55567665444567999999999996554443
No 129
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=80.42 E-value=0.35 Score=49.42 Aligned_cols=104 Identities=15% Similarity=0.202 Sum_probs=60.5
Q ss_pred CCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcc-cccceEEEecCCCCCCCCCCCCCCCccCCchhh
Q 044068 111 STKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWN-NVANMLFLESPAGVGFSYSNTSSDYVMNGDERT 189 (481)
Q Consensus 111 ~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~-~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~ 189 (481)
.++|++|.+||=-+..+.. .-+. .+..+-+... ...|||.||--.|+.-.|... ..+...+
T Consensus 69 ~~~pt~iiiHGw~~~~~~~-~~~~------------~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a-----~~n~~~v 130 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSE-SWIQ------------DMIKALLQKDTGDYNVIVVDWSRGASNNYPQA-----VANTRLV 130 (331)
T ss_dssp TTSEEEEEE--TT-TT-TT-THHH------------HHHHHHHCC--S-EEEEEEE-HHHHSS-HHHH-----HHHHHHH
T ss_pred CCCCeEEEEcCcCCcccch-hHHH------------HHHHHHHhhccCCceEEEEcchhhccccccch-----hhhHHHH
Confidence 5789999999843333100 0000 1122222221 468999999866665544321 1256678
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHH
Q 044068 190 AADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQ 233 (481)
Q Consensus 190 A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 233 (481)
++.+-.||+.....+ .+...+++|.|+|.|+|.+-.+++++..
T Consensus 131 g~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 131 GRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 888888887777432 3345689999999999999988888754
No 130
>PLN02571 triacylglycerol lipase
Probab=79.67 E-value=4.5 Score=42.41 Aligned_cols=67 Identities=7% Similarity=0.120 Sum_probs=48.5
Q ss_pred hhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhc--c----CCceecceeeeecCcccC
Q 044068 187 ERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFN--K----NQTFINLKGLAMGDAWID 254 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n--~----~~~~inLkGi~IGNg~~d 254 (481)
..+.+++...|+.+.+++|.. ..+++++|||.||-.+-..|..|.... . ....+++..+..|.|-+.
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 456788888899988888764 347999999999999998888886531 1 012345667777776654
No 131
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=78.53 E-value=11 Score=29.88 Aligned_cols=78 Identities=18% Similarity=0.220 Sum_probs=50.4
Q ss_pred ceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCC
Q 044068 98 RALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNT 177 (481)
Q Consensus 98 ~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~ 177 (481)
.+||+..++..++ .+.+|+.++|--..|.. |..|. . .|.. +-.+|+-+|+ .|.|.|-+..
T Consensus 2 ~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~r-y~~~a---~--------~L~~------~G~~V~~~D~-rGhG~S~g~r 61 (79)
T PF12146_consen 2 TKLFYRRWKPENP-PKAVVVIVHGFGEHSGR-YAHLA---E--------FLAE------QGYAVFAYDH-RGHGRSEGKR 61 (79)
T ss_pred cEEEEEEecCCCC-CCEEEEEeCCcHHHHHH-HHHHH---H--------HHHh------CCCEEEEECC-CcCCCCCCcc
Confidence 4678877766333 68999999997555544 43333 1 1221 3457889996 9999997533
Q ss_pred CCCCccCCchhhHHHHHHHHH
Q 044068 178 SSDYVMNGDERTAADSYTFLL 198 (481)
Q Consensus 178 ~~~~~~~~~~~~A~d~~~fL~ 198 (481)
. .. .+.++..+|+..|+|
T Consensus 62 g--~~-~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 62 G--HI-DSFDDYVDDLHQFIQ 79 (79)
T ss_pred c--cc-CCHHHHHHHHHHHhC
Confidence 2 22 266788888877764
No 132
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=76.41 E-value=3.2 Score=38.81 Aligned_cols=60 Identities=17% Similarity=0.209 Sum_probs=48.6
Q ss_pred CchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCc
Q 044068 185 GDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDA 251 (481)
Q Consensus 185 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg 251 (481)
+.+++|.|+-+.++.+.++ .+.+++.|+|-|+|.-.+|.+..++...- +-.++++++..+
T Consensus 46 tP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~----r~~v~~v~Ll~p 105 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAAL----RARVAQVVLLSP 105 (192)
T ss_pred CHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHH----HhheeEEEEecc
Confidence 7789999999988888874 55789999999999999999999885542 344777776654
No 133
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=76.32 E-value=2.1 Score=40.50 Aligned_cols=74 Identities=16% Similarity=0.112 Sum_probs=52.8
Q ss_pred CCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeee
Q 044068 168 AGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLA 247 (481)
Q Consensus 168 vG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~ 247 (481)
+-+||-+++... +.+++..++.++++--|+.+|.- +.+-+.|||-|.|.+-.+..++.. -.+.|++
T Consensus 101 asvgY~l~~q~h-----tL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHLa~qav~R~r~-------prI~gl~ 166 (270)
T KOG4627|consen 101 ASVGYNLCPQVH-----TLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHLAAQAVMRQRS-------PRIWGLI 166 (270)
T ss_pred EEeccCcCcccc-----cHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHHHHHHHHHhcC-------chHHHHH
Confidence 345666654332 66788889999888777777743 359999999999988877777532 2378888
Q ss_pred ecCcccCc
Q 044068 248 MGDAWIDT 255 (481)
Q Consensus 248 IGNg~~dp 255 (481)
+-.|+-+-
T Consensus 167 l~~GvY~l 174 (270)
T KOG4627|consen 167 LLCGVYDL 174 (270)
T ss_pred HHhhHhhH
Confidence 88776653
No 134
>COG0627 Predicted esterase [General function prediction only]
Probab=74.09 E-value=6.7 Score=39.80 Aligned_cols=130 Identities=20% Similarity=0.203 Sum_probs=72.3
Q ss_pred CCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCc--cccC-CcCcccccceEEEecCCCCCCCCCCCCCCCccCCchh
Q 044068 112 TKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKS--LSHN-EYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDER 188 (481)
Q Consensus 112 ~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~--l~~n-~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~ 188 (481)
.+.-|+|+.+|..|.-- .+.+.++++-..+... +.-+ -.-+....++--|+ |.|.|.|+-.+...-+. ...
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~-~~~- 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPW-ASG- 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCcc-ccC-
Confidence 44455566666888741 2344555543222111 1111 22244555666667 69999998443221000 000
Q ss_pred hHHHHHHHHH-----HHHHHCcCCCC-CCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 189 TAADSYTFLL-----NWFERFPEYKS-RAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 189 ~A~d~~~fL~-----~f~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
..+.+.||. .+.+.||--.. ..-.|+|+|+||+=+-.+|.+-.++ ++.++--.|+++|.
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~--------f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR--------FKSASSFSGILSPS 190 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch--------hceecccccccccc
Confidence 244444443 34455663322 3678999999999888888766433 77777777888776
No 135
>PLN02753 triacylglycerol lipase
Probab=73.61 E-value=7.9 Score=41.68 Aligned_cols=70 Identities=14% Similarity=0.158 Sum_probs=49.6
Q ss_pred CchhhHHHHHHHHHHHHHHCcC--CCCCCEEEEcccccccccHHHHHHHHHhc--c--CCceecceeeeecCcccC
Q 044068 185 GDERTAADSYTFLLNWFERFPE--YKSRAFFLAGESYAGHYIPQVALTILQFN--K--NQTFINLKGLAMGDAWID 254 (481)
Q Consensus 185 ~~~~~A~d~~~fL~~f~~~fp~--~~~~~~yi~GESYgG~yvP~lA~~i~~~n--~--~~~~inLkGi~IGNg~~d 254 (481)
+...+.+++...++...+.+|. .....++|+|||.||-.+-..|..|.+.. . ....+++.-+..|.|-+.
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 3456788899999999888763 23458999999999999999998886632 1 112345566666665543
No 136
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=73.03 E-value=33 Score=37.58 Aligned_cols=66 Identities=12% Similarity=0.028 Sum_probs=41.3
Q ss_pred CchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 185 GDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 185 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
+.++..+.+.++|..--+.- ..+++.+.|.|.||...-.++....... ..-.++++.+....+|..
T Consensus 266 ~ldDYv~~i~~Ald~V~~~t---G~~~vnl~GyC~GGtl~a~~~a~~aA~~---~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 266 GLSTYVDALKEAVDAVRAIT---GSRDLNLLGACAGGLTCAALVGHLQALG---QLRKVNSLTYLVSLLDST 331 (560)
T ss_pred CHHHHHHHHHHHHHHHHHhc---CCCCeeEEEECcchHHHHHHHHHHHhcC---CCCceeeEEeeecccccC
Confidence 44554556666665443332 2578999999999999986433332221 112588888887777744
No 137
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=72.36 E-value=14 Score=33.46 Aligned_cols=76 Identities=18% Similarity=0.160 Sum_probs=47.9
Q ss_pred ccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccC
Q 044068 158 VANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKN 237 (481)
Q Consensus 158 ~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 237 (481)
..+++-+|. .|.|.+-.. . .+.+..++.....+.. ..+ ..++.++|+|+||..+-.+|.++.++.
T Consensus 25 ~~~v~~~~~-~g~~~~~~~--~----~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~-- 89 (212)
T smart00824 25 RRDVSALPL-PGFGPGEPL--P----ASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEARG-- 89 (212)
T ss_pred CccEEEecC-CCCCCCCCC--C----CCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhCC--
Confidence 467888884 666644211 1 1444555555544442 222 568999999999999999998876542
Q ss_pred CceecceeeeecCc
Q 044068 238 QTFINLKGLAMGDA 251 (481)
Q Consensus 238 ~~~inLkGi~IGNg 251 (481)
..++++++.+.
T Consensus 90 ---~~~~~l~~~~~ 100 (212)
T smart00824 90 ---IPPAAVVLLDT 100 (212)
T ss_pred ---CCCcEEEEEcc
Confidence 23666666554
No 138
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=72.17 E-value=9.5 Score=36.50 Aligned_cols=57 Identities=25% Similarity=0.412 Sum_probs=43.4
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccCh--HHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQP--ARALAFF 467 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP--~~al~mi 467 (481)
.++.|-+-|+.|.+++..-++..++.-. + ..+..+-.||+||.-.| +.+.+.|
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~------------------------~-a~vl~HpggH~VP~~~~~~~~i~~fi 217 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFK------------------------D-ATVLEHPGGHIVPNKAKYKEKIADFI 217 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcC------------------------C-CeEEecCCCccCCCchHHHHHHHHHH
Confidence 5899999999999999998888877743 2 15888999999998764 3444455
Q ss_pred HHHH
Q 044068 468 SSFL 471 (481)
Q Consensus 468 ~~fl 471 (481)
+.++
T Consensus 218 ~~~~ 221 (230)
T KOG2551|consen 218 QSFL 221 (230)
T ss_pred HHHH
Confidence 5444
No 139
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=71.25 E-value=20 Score=34.44 Aligned_cols=122 Identities=12% Similarity=0.092 Sum_probs=59.6
Q ss_pred CCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhHH
Q 044068 112 TKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAA 191 (481)
Q Consensus 112 ~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~ 191 (481)
+...||+++|--|+... ..-+...- ..+ . ....+....++.-+|=. .-+|.-. . ....+.++
T Consensus 3 ~g~pVlFIhG~~Gs~~q-~rsl~~~~----~~~---~--~~~~~~~~~d~ft~df~--~~~s~~~-g-----~~l~~q~~ 64 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQ-VRSLASEL----QRK---A--LLNDNSSHFDFFTVDFN--EELSAFH-G-----RTLQRQAE 64 (225)
T ss_pred CCCEEEEECcCCCCHhH-HHHHHHHH----hhh---h--hhccCccceeEEEeccC--ccccccc-c-----ccHHHHHH
Confidence 45789999998888764 22222110 000 0 01122234556666621 1111111 1 12234555
Q ss_pred HHHHHHHHHHHHC--cCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceee-eecCcccCcc
Q 044068 192 DSYTFLLNWFERF--PEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGL-AMGDAWIDTE 256 (481)
Q Consensus 192 d~~~fL~~f~~~f--p~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi-~IGNg~~dp~ 256 (481)
.+.+.++...+.+ ..-..+++.|.|||+||.-+-.+.. .... .+-++++| .+|.|...+.
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~-~~~~----~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALS-LPNY----DPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHh-cccc----ccccEEEEEEEcCCCCCcc
Confidence 6666666655544 1224678999999999964433332 1111 12234554 4566655554
No 140
>PF03283 PAE: Pectinacetylesterase
Probab=70.80 E-value=42 Score=34.77 Aligned_cols=150 Identities=19% Similarity=0.186 Sum_probs=75.9
Q ss_pred ceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhh---hhhhhcCCeEE-----cCCC---CccccCCcCcccccceEEEec
Q 044068 98 RALFYYFVESQNSSTKPLVLWLNGGPGCSSFGF---GAMMELGPFRV-----NSDG---KSLSHNEYAWNNVANMLFLES 166 (481)
Q Consensus 98 ~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~---g~f~E~GP~~~-----~~~~---~~l~~n~~sW~~~anvlyiDq 166 (481)
+.-.|++-+......+-+||.|+||-.|.+..- -...++|-..- ..++ ..-..||.=+ ..|++||=
T Consensus 35 S~~~yy~~~g~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~vp- 111 (361)
T PF03283_consen 35 SPPGYYFRPGSGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVFVP- 111 (361)
T ss_pred CCCcEEEccCCCCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEEEE-
Confidence 333444444433456899999999999987410 11234443221 1111 1123465322 26778884
Q ss_pred CCCCCCCCCCCCC--CCccCCchhhHHHHH-HHHHHHHHH-CcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceec
Q 044068 167 PAGVGFSYSNTSS--DYVMNGDERTAADSY-TFLLNWFER-FPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFIN 242 (481)
Q Consensus 167 PvG~GfSy~~~~~--~~~~~~~~~~A~d~~-~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~in 242 (481)
==+|-++.-+.. .+...+.--....++ +.|...... +++ ..++.|+|.|-||.=+..-+.++.+.=. ...+
T Consensus 112 -YC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp--~~~~ 186 (361)
T PF03283_consen 112 -YCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLP--SSVK 186 (361)
T ss_pred -ecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhc--cCce
Confidence 344444422111 110001111223333 444444444 443 4579999999999887777777765421 1345
Q ss_pred ceeeeecCcccCc
Q 044068 243 LKGLAMGDAWIDT 255 (481)
Q Consensus 243 LkGi~IGNg~~dp 255 (481)
++++.-..-++|.
T Consensus 187 v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 187 VKCLSDSGFFLDN 199 (361)
T ss_pred EEEeccccccccc
Confidence 5665555444443
No 141
>PLN02719 triacylglycerol lipase
Probab=70.75 E-value=8.8 Score=41.24 Aligned_cols=68 Identities=13% Similarity=0.220 Sum_probs=48.4
Q ss_pred hhhHHHHHHHHHHHHHHCcCCC--CCCEEEEcccccccccHHHHHHHHHhc--c--CCceecceeeeecCcccC
Q 044068 187 ERTAADSYTFLLNWFERFPEYK--SRAFFLAGESYAGHYIPQVALTILQFN--K--NQTFINLKGLAMGDAWID 254 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~~fp~~~--~~~~yi~GESYgG~yvP~lA~~i~~~n--~--~~~~inLkGi~IGNg~~d 254 (481)
..+.+++...++...+.+|.+. ...++|+|||.||-.+-..|..|.+.. + ....+.+.-+..|.|=+.
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVG 346 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVG 346 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCcc
Confidence 4577888899999999888652 347999999999999999998887642 1 111234555666665443
No 142
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=69.91 E-value=9.7 Score=36.64 Aligned_cols=61 Identities=21% Similarity=0.354 Sum_probs=48.4
Q ss_pred ceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChH---HHHHHH
Q 044068 391 ISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPA---RALAFF 467 (481)
Q Consensus 391 irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~---~al~mi 467 (481)
.++|+.+|..|.++|....+....... ..+.....+.+++|....+.+. +++.-+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~----------------------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 290 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR----------------------ERPKKLLFVPGGGHIDLYDNPPAVEQALDKL 290 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc----------------------cCCceEEEecCCccccccCccHHHHHHHHHH
Confidence 899999999999999998888877644 1145888999999999986665 577767
Q ss_pred HHHHcC
Q 044068 468 SSFLDG 473 (481)
Q Consensus 468 ~~fl~~ 473 (481)
.+|+..
T Consensus 291 ~~f~~~ 296 (299)
T COG1073 291 AEFLER 296 (299)
T ss_pred HHHHHH
Confidence 777654
No 143
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=69.26 E-value=5.2 Score=37.89 Aligned_cols=48 Identities=21% Similarity=0.326 Sum_probs=32.6
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPA 461 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~ 461 (481)
.+|+|.+.|..|.+++...++...+... .. ..+..+..||.||...+.
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~-----------------------~~-~~v~~h~gGH~vP~~~~~ 208 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD-----------------------PD-ARVIEHDGGHHVPRKKED 208 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH-----------------------HH-EEEEEESSSSS----HHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc-----------------------CC-cEEEEECCCCcCcCChhh
Confidence 5999999999999999888887776643 12 668889999999998764
No 144
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=68.33 E-value=6.4 Score=37.38 Aligned_cols=48 Identities=13% Similarity=0.188 Sum_probs=36.9
Q ss_pred HHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 197 LLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 197 L~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
-.+|++.+|+...+++-|.|-|.||-++-.+|.+.. .++.++..+|..
T Consensus 9 Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~---------~i~avVa~~ps~ 56 (213)
T PF08840_consen 9 AIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP---------QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS---------SEEEEEEES--S
T ss_pred HHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC---------CccEEEEeCCce
Confidence 346778999999899999999999999999998773 478888777643
No 145
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=67.61 E-value=12 Score=38.10 Aligned_cols=93 Identities=22% Similarity=0.260 Sum_probs=56.8
Q ss_pred CCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcc-----cccceEEEecCCCCCCCCCCCCCCCcc
Q 044068 109 NSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWN-----NVANMLFLESPAGVGFSYSNTSSDYVM 183 (481)
Q Consensus 109 ~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~-----~~anvlyiDqPvG~GfSy~~~~~~~~~ 183 (481)
+.+++-.||+.+|- |.++|+== -+..-...|. ..+|++..- .+|||+|-+..
T Consensus 133 ~a~~~RWiL~s~GN--------g~~~E~~~--------~~~~~~~~~~~~ak~~~aNvl~fN-YpGVg~S~G~~------ 189 (365)
T PF05677_consen 133 EAKPQRWILVSNGN--------GECYENRA--------MLDYKDDWIQRFAKELGANVLVFN-YPGVGSSTGPP------ 189 (365)
T ss_pred CCCCCcEEEEEcCC--------hHHhhhhh--------hhccccHHHHHHHHHcCCcEEEEC-CCccccCCCCC------
Confidence 45788999999984 33344200 0011122333 468999998 79999996653
Q ss_pred CCchhhHHHHHHHHHHHHHHCcC-CCCCCEEEEcccccccccHH
Q 044068 184 NGDERTAADSYTFLLNWFERFPE-YKSRAFFLAGESYAGHYIPQ 226 (481)
Q Consensus 184 ~~~~~~A~d~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP~ 226 (481)
+-++..+| ++++.++++..++ -+.+.+.+-|+|-||-....
T Consensus 190 -s~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 190 -SRKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred -CHHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 22333443 3345566654332 35578999999999976443
No 146
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=66.58 E-value=8.8 Score=36.90 Aligned_cols=53 Identities=13% Similarity=0.171 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCc
Q 044068 191 ADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDA 251 (481)
Q Consensus 191 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg 251 (481)
+...++|++..+.+++ +++|+|||=||..+-+.|..+.+.. .-.++.+..-||
T Consensus 69 ~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~~----~~rI~~vy~fDg 121 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDEI----QDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHHH----hhheeEEEEeeC
Confidence 3445667776666553 5999999999999999888764432 123555555554
No 147
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=66.23 E-value=9.1 Score=35.10 Aligned_cols=43 Identities=21% Similarity=0.382 Sum_probs=35.3
Q ss_pred ceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCcc
Q 044068 391 ISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSS 458 (481)
Q Consensus 391 irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~d 458 (481)
++.+++.++.|.+||+.-++++.+.++ ..++.+.++||+-..+
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~-------------------------a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG-------------------------AELIILGGGGHFNAAS 157 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT--------------------------EEEEETS-TTSSGGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC-------------------------CCeEECCCCCCccccc
Confidence 566999999999999999999998876 4789999999997654
No 148
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=66.13 E-value=13 Score=37.00 Aligned_cols=37 Identities=19% Similarity=0.347 Sum_probs=30.8
Q ss_pred chhhHHHHHHHHHHHHHHCcCCCCCCEEEEccccccc
Q 044068 186 DERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGH 222 (481)
Q Consensus 186 ~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 222 (481)
-.+++..|++.+.......|+=..-++|+.|||-|..
T Consensus 85 a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 85 AREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 4578888999999888888887666799999998764
No 149
>PRK04940 hypothetical protein; Provisional
Probab=65.24 E-value=10 Score=35.25 Aligned_cols=38 Identities=8% Similarity=0.197 Sum_probs=30.8
Q ss_pred CCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcccc
Q 044068 210 RAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTETG 258 (481)
Q Consensus 210 ~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~~q 258 (481)
+++.|+|.|-||.|+-.+|.+. .++. ++.||.+.|...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~----------g~~a-VLiNPAv~P~~~ 97 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC----------GIRQ-VIFNPNLFPEEN 97 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH----------CCCE-EEECCCCChHHH
Confidence 4799999999999999999875 2444 566999999654
No 150
>PRK14566 triosephosphate isomerase; Provisional
Probab=65.14 E-value=16 Score=36.01 Aligned_cols=61 Identities=15% Similarity=0.305 Sum_probs=45.9
Q ss_pred hhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 187 ERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
.+.|++++.|+++++...-+...+.+=|. |||---|.=+..|.... ++.|+.||..-+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC------CCCeEEechHhcCHH
Confidence 34588999999999875321112234444 99999999999998765 499999999988874
No 151
>PRK14567 triosephosphate isomerase; Provisional
Probab=64.15 E-value=18 Score=35.43 Aligned_cols=61 Identities=16% Similarity=0.297 Sum_probs=45.8
Q ss_pred hhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 187 ERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
.+.+++++.++++++..+-+-....+-|. |||-.-|.=+..+++.. ++.|+.||.+.+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC------CCCEEEeehhhhcHH
Confidence 45688888999998876422112334444 99999999999998764 399999999998875
No 152
>PLN02408 phospholipase A1
Probab=63.66 E-value=10 Score=39.24 Aligned_cols=46 Identities=9% Similarity=0.063 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHh
Q 044068 188 RTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQF 234 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 234 (481)
.+.+++.+.++.+.+.+|.. ...++|+|||.||-.+-..|..|...
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHh
Confidence 56778888888888888764 23699999999999999988888654
No 153
>PLN02761 lipase class 3 family protein
Probab=63.23 E-value=17 Score=39.14 Aligned_cols=68 Identities=12% Similarity=0.101 Sum_probs=46.9
Q ss_pred chhhHHHHHHHHHHHHHHCcCC-C--CCCEEEEcccccccccHHHHHHHHHhcc-----CCceecceeeeecCccc
Q 044068 186 DERTAADSYTFLLNWFERFPEY-K--SRAFFLAGESYAGHYIPQVALTILQFNK-----NQTFINLKGLAMGDAWI 253 (481)
Q Consensus 186 ~~~~A~d~~~fL~~f~~~fp~~-~--~~~~yi~GESYgG~yvP~lA~~i~~~n~-----~~~~inLkGi~IGNg~~ 253 (481)
...+.+++...++...+.+|.. + .-.++|+|||.||-.+-..|..|...+. ....+++.-+..|.|=+
T Consensus 267 k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRV 342 (527)
T PLN02761 267 SFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRV 342 (527)
T ss_pred chhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCc
Confidence 3467788888899988887532 2 2359999999999999998888865321 11234455666666544
No 154
>PLN02310 triacylglycerol lipase
Probab=62.93 E-value=15 Score=38.55 Aligned_cols=65 Identities=8% Similarity=0.039 Sum_probs=42.9
Q ss_pred hhhHHHHHHHHHHHHHHCcCC-CCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccC
Q 044068 187 ERTAADSYTFLLNWFERFPEY-KSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWID 254 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~d 254 (481)
..+.+++.+.++...+.+++- ....+.|+|||.||-.+-..|..|.... ..+++.-+..|.|-+.
T Consensus 185 ~sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~---~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 185 LSASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI---PDLFVSVISFGAPRVG 250 (405)
T ss_pred chHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC---cCcceeEEEecCCCcc
Confidence 345567777777777766531 2347999999999999988887775432 2344555666665543
No 155
>PLN02934 triacylglycerol lipase
Probab=62.41 E-value=16 Score=39.24 Aligned_cols=40 Identities=13% Similarity=0.168 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHH
Q 044068 191 ADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQ 233 (481)
Q Consensus 191 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 233 (481)
..+...|+++++.+|. .+++++|||-||-.+-..|..+..
T Consensus 305 ~~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHH
Confidence 4566778888888875 579999999999998888876654
No 156
>PLN00413 triacylglycerol lipase
Probab=62.19 E-value=9 Score=40.79 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHH
Q 044068 192 DSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQ 233 (481)
Q Consensus 192 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 233 (481)
++.+.|++.++.+| +.+++++|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p---~~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNP---TSKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCC---CCeEEEEecCHHHHHHHHHHHHHHh
Confidence 56677888888777 4579999999999999888876643
No 157
>KOG3101 consensus Esterase D [General function prediction only]
Probab=62.16 E-value=36 Score=32.57 Aligned_cols=152 Identities=14% Similarity=0.193 Sum_probs=74.1
Q ss_pred ceeEEeEEEecC----CCCceeEEE-EEEeC--CCCCCCeEEEEcCCCChhhhhhhhhh----------hcCCeEEcCCC
Q 044068 83 IDQYSGYVTVDP----KAGRALFYY-FVESQ--NSSTKPLVLWLNGGPGCSSFGFGAMM----------ELGPFRVNSDG 145 (481)
Q Consensus 83 ~~~ysGyl~v~~----~~~~~lFyw-ffes~--~p~~~PlvlWlnGGPGcSSl~~g~f~----------E~GP~~~~~~~ 145 (481)
.+++-|+..|-+ +.+-.|=|- +++-. +.+.-|+++||.|= -|.- -+|. ++|=..|.+|.
T Consensus 7 nk~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGL-TCT~---~Nfi~Ksg~qq~As~hgl~vV~PDT 82 (283)
T KOG3101|consen 7 NKCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGL-TCTH---ENFIEKSGFQQQASKHGLAVVAPDT 82 (283)
T ss_pred cccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecCC-cccc---hhhHhhhhHHHhHhhcCeEEECCCC
Confidence 345556665532 223345553 44332 33446999999973 3431 2333 35555566653
Q ss_pred C----ccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHH-HCcCCCCCCEEEEccccc
Q 044068 146 K----SLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFE-RFPEYKSRAFFLAGESYA 220 (481)
Q Consensus 146 ~----~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~-~fp~~~~~~~yi~GESYg 220 (481)
. .+.-.+-|| |==.|.||=-..+.+.+. +--++-+.+.+-|-+-+. .+-.+-..+.-|+|||+|
T Consensus 83 SPRG~~v~g~~esw---------DFG~GAGFYvnAt~epw~--~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMG 151 (283)
T KOG3101|consen 83 SPRGVEVAGDDESW---------DFGQGAGFYVNATQEPWA--KHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMG 151 (283)
T ss_pred CCCccccCCCcccc---------cccCCceeEEecccchHh--hhhhHHHHHHHHHHHHhccccccccchhcceeccccC
Confidence 1 112223355 323555653222222221 112222333333333222 222233346899999999
Q ss_pred ccccHHHHHHHHHhccCCceecceeeeecCcccCccc
Q 044068 221 GHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTET 257 (481)
Q Consensus 221 G~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~~ 257 (481)
||=+-.++.+= +-..|++---.|.++|..
T Consensus 152 GhGAl~~~Lkn--------~~kykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 152 GHGALTIYLKN--------PSKYKSVSAFAPICNPIN 180 (283)
T ss_pred CCceEEEEEcC--------cccccceeccccccCccc
Confidence 99655444321 234677777777777764
No 158
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=62.09 E-value=8.2 Score=36.19 Aligned_cols=57 Identities=28% Similarity=0.368 Sum_probs=42.0
Q ss_pred CCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHH
Q 044068 167 PAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTI 231 (481)
Q Consensus 167 PvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i 231 (481)
=.|||-|-++-+.+. .+.+-|....+.|+ .++|+-. .+.++|-|+|+..+-.+|.+.
T Consensus 68 fRgVG~S~G~fD~Gi---GE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~ 124 (210)
T COG2945 68 FRGVGRSQGEFDNGI---GELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRR 124 (210)
T ss_pred ccccccccCcccCCc---chHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhc
Confidence 599999998766553 55556666666666 4788643 379999999998777777766
No 159
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=61.16 E-value=11 Score=35.86 Aligned_cols=50 Identities=12% Similarity=0.065 Sum_probs=37.6
Q ss_pred CchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhc
Q 044068 185 GDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFN 235 (481)
Q Consensus 185 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n 235 (481)
+.+..++.+.+.|.+..+..+.- .+++.+.|||.||.++-+....+.+.+
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 44567888888888877765432 468999999999999987777666553
No 160
>PLN02847 triacylglycerol lipase
Probab=60.10 E-value=14 Score=40.35 Aligned_cols=68 Identities=15% Similarity=0.213 Sum_probs=41.3
Q ss_pred ccCCchhhHHHHHH----HHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecC-cccCc
Q 044068 182 VMNGDERTAADSYT----FLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGD-AWIDT 255 (481)
Q Consensus 182 ~~~~~~~~A~d~~~----fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGN-g~~dp 255 (481)
.+...-..|+.++. .|++-+..+|.| ++.|+|||.||-.+-.++..+.++.. .-++..++.|- |++++
T Consensus 222 AH~Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~---fssi~CyAFgPp~cvS~ 294 (633)
T PLN02847 222 AHCGMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE---FSSTTCVTFAPAACMTW 294 (633)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC---CCCceEEEecCchhcCH
Confidence 33345455555554 445555667755 79999999999988887665543321 23455666664 34444
No 161
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=60.00 E-value=36 Score=31.85 Aligned_cols=60 Identities=23% Similarity=0.265 Sum_probs=37.4
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCC-----ccChHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVP-----SSQPARAL 464 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP-----~dqP~~al 464 (481)
..||++..|+.|..++....+...+.|+=.+. ..++.+..|++|==. ..+++++.
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~--------------------~~~~~~y~ga~HgF~~~~~~~~~~~aa~ 204 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAAGV--------------------DVEVHVYPGAGHGFANPSRPPYDPAAAE 204 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCTTT--------------------TEEEEEETT--TTTTSTTSTT--HHHHH
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhcCC--------------------cEEEEECCCCcccccCCCCcccCHHHHH
Confidence 68999999999999999998888888852222 468889999999632 23444554
Q ss_pred HHHHH
Q 044068 465 AFFSS 469 (481)
Q Consensus 465 ~mi~~ 469 (481)
+..++
T Consensus 205 ~a~~~ 209 (218)
T PF01738_consen 205 DAWQR 209 (218)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 162
>PLN02324 triacylglycerol lipase
Probab=58.91 E-value=21 Score=37.45 Aligned_cols=48 Identities=10% Similarity=0.016 Sum_probs=38.5
Q ss_pred chhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHh
Q 044068 186 DERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQF 234 (481)
Q Consensus 186 ~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 234 (481)
...+.+++.+.|+...+.+|.. ...++|+|||.||-.+-..|..|.+.
T Consensus 192 k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 192 TTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred hhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHh
Confidence 3467788888889988887743 23699999999999999999888764
No 163
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=57.88 E-value=60 Score=33.70 Aligned_cols=133 Identities=17% Similarity=0.305 Sum_probs=82.1
Q ss_pred CceeEEEEEEe-CC--CCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCC
Q 044068 97 GRALFYYFVES-QN--SSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFS 173 (481)
Q Consensus 97 ~~~lFywffes-~~--p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfS 173 (481)
|-+++|..+.- .. +++-=-+|-+||=||+= ==|...=|..-++.... ..++ -.++|| .=+-+|-|+|
T Consensus 133 GL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv----~EFykfIPlLT~p~~hg-~~~d----~~FEVI-~PSlPGygwS 202 (469)
T KOG2565|consen 133 GLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSV----REFYKFIPLLTDPKRHG-NESD----YAFEVI-APSLPGYGWS 202 (469)
T ss_pred ceeEEEEEecCCccccCCcccceEEecCCCchH----HHHHhhhhhhcCccccC-Cccc----eeEEEe-ccCCCCcccC
Confidence 45688877744 22 22222356689999973 34565666655543110 0111 123444 3447899999
Q ss_pred CCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 174 YSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 174 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
-..+..++ +..++|.-+...+- ++.-++|||=|--||.....-+|... +-|+.|+=+-+..+
T Consensus 203 d~~sk~GF---n~~a~ArvmrkLMl-------RLg~nkffiqGgDwGSiI~snlasLy--------PenV~GlHlnm~~~ 264 (469)
T KOG2565|consen 203 DAPSKTGF---NAAATARVMRKLML-------RLGYNKFFIQGGDWGSIIGSNLASLY--------PENVLGLHLNMCFV 264 (469)
T ss_pred cCCccCCc---cHHHHHHHHHHHHH-------HhCcceeEeecCchHHHHHHHHHhhc--------chhhhHhhhccccc
Confidence 87665554 56677776665443 45567999988778888888888766 55678887777766
Q ss_pred Cccc
Q 044068 254 DTET 257 (481)
Q Consensus 254 dp~~ 257 (481)
.|..
T Consensus 265 ~s~~ 268 (469)
T KOG2565|consen 265 NSPF 268 (469)
T ss_pred CCcH
Confidence 6653
No 164
>PLN02162 triacylglycerol lipase
Probab=57.03 E-value=13 Score=39.67 Aligned_cols=40 Identities=15% Similarity=0.169 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHH
Q 044068 191 ADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQ 233 (481)
Q Consensus 191 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 233 (481)
..+.+.|++++.++| +.+++++|||.||-.+-..|..+..
T Consensus 262 ~~I~~~L~~lL~k~p---~~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 262 YTIRQMLRDKLARNK---NLKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHHhCC---CceEEEEecChHHHHHHHHHHHHHH
Confidence 345556677777777 4579999999999988887776643
No 165
>PLN02802 triacylglycerol lipase
Probab=56.58 E-value=21 Score=38.42 Aligned_cols=63 Identities=10% Similarity=0.061 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 188 RTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
.+.+++.+-++.+++++|.- ...++|+|||.||-.+-..|..|...... .+.+.-+..|.|-+
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~--~~pV~vyTFGsPRV 371 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA--APPVAVFSFGGPRV 371 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC--CCceEEEEcCCCCc
Confidence 46677888888888876632 23699999999999999988888654321 12344555555544
No 166
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=55.10 E-value=80 Score=31.57 Aligned_cols=90 Identities=16% Similarity=0.056 Sum_probs=54.7
Q ss_pred HHHHHHHHhcCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeee--cCeeceEEEee---cceEEEEEcCCCcc
Q 044068 380 LPSIQELMTSGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYI--QGEVGGYVVGY---QNLTFVAIRGAGHM 454 (481)
Q Consensus 380 ~~~l~~Ll~~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~--~~~~aG~~k~~---~nltf~~V~~AGHm 454 (481)
.+.++.|-++.+||++.-|-.|.++--.=.++..... .+.+.+.--.. +.+.---.+++ ..-.-+.|.+-||+
T Consensus 202 ~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f--~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf 279 (297)
T PF06342_consen 202 KEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF--KGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHF 279 (297)
T ss_pred HHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh--CCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChH
Confidence 4667778788899999999999998766666655443 22221111000 00000000011 12355789999999
Q ss_pred CCccChHHHHHHHHHHH
Q 044068 455 VPSSQPARALAFFSSFL 471 (481)
Q Consensus 455 vP~dqP~~al~mi~~fl 471 (481)
..-.||+-.-+.+...+
T Consensus 280 ~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 280 QQKFRADLIAEAIKKMF 296 (297)
T ss_pred HhHHHHHHHHHHHHHhh
Confidence 99999987777776644
No 167
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=54.64 E-value=27 Score=32.30 Aligned_cols=65 Identities=22% Similarity=0.174 Sum_probs=39.6
Q ss_pred cccceEEEecCCC--CCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHC-cCCCCCCEEEEcccccccccHHHHHH
Q 044068 157 NVANMLFLESPAG--VGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERF-PEYKSRAFFLAGESYAGHYIPQVALT 230 (481)
Q Consensus 157 ~~anvlyiDqPvG--~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~f-p~~~~~~~yi~GESYgG~yvP~lA~~ 230 (481)
+.|-|.|++-... ...+-. ...+ -+..|.+|..|+..+=..+ | .-.+-+.|||||+.-+-.-+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~--~~~~----A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAA--SPGY----ARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCcccccc--CchH----HHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 6778888754333 222211 1111 2456777777777665555 3 3478999999999876665554
No 168
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=54.36 E-value=26 Score=33.95 Aligned_cols=67 Identities=16% Similarity=0.222 Sum_probs=41.3
Q ss_pred ccceEEEecCCCCCCCCCCCCCCCccCCc-hhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHH
Q 044068 158 VANMLFLESPAGVGFSYSNTSSDYVMNGD-ERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVAL 229 (481)
Q Consensus 158 ~anvlyiDqPvG~GfSy~~~~~~~~~~~~-~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 229 (481)
=+.||-.| =.|+|-|.....+.... .- +=+-.|+-..|..-=+.-| ..|.|..||||||+..--++.
T Consensus 57 Gf~Vlt~d-yRG~g~S~p~~~~~~~~-~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 57 GFEVLTFD-YRGIGQSRPASLSGSQW-RYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred CceEEEEe-cccccCCCccccccCcc-chhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccccc
Confidence 46788888 59999997554432211 11 2234455444443333333 679999999999997655543
No 169
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=53.97 E-value=40 Score=32.41 Aligned_cols=61 Identities=10% Similarity=-0.012 Sum_probs=46.5
Q ss_pred CchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCc
Q 044068 185 GDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDA 251 (481)
Q Consensus 185 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg 251 (481)
+..+-++.+.+.+..+.. ..+++.|+|.|-|+.-+-...+++.+... ...-+++-+.+||+
T Consensus 28 Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~-~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGD-PPPDDLSFVLIGNP 88 (225)
T ss_pred HHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCC-CCcCceEEEEecCC
Confidence 556677778888876665 47899999999999988888888877432 11256889999986
No 170
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=53.36 E-value=7.8 Score=36.06 Aligned_cols=17 Identities=35% Similarity=0.837 Sum_probs=14.5
Q ss_pred CCCCeEEEEcCCCChhh
Q 044068 111 STKPLVLWLNGGPGCSS 127 (481)
Q Consensus 111 ~~~PlvlWlnGGPGcSS 127 (481)
.++|-|+|+-|||||--
T Consensus 5 ~~~~~IifVlGGPGsgK 21 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSGK 21 (195)
T ss_pred ccCCCEEEEEcCCCCCc
Confidence 46799999999999863
No 171
>PLN03037 lipase class 3 family protein; Provisional
Probab=53.12 E-value=25 Score=37.93 Aligned_cols=47 Identities=11% Similarity=0.094 Sum_probs=34.5
Q ss_pred hhHHHHHHHHHHHHHHCcCC-CCCCEEEEcccccccccHHHHHHHHHh
Q 044068 188 RTAADSYTFLLNWFERFPEY-KSRAFFLAGESYAGHYIPQVALTILQF 234 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~ 234 (481)
.+.+++.+.++...+.+++. ....++|+|||.||-.+-..|..|...
T Consensus 295 SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 295 SASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred hhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHh
Confidence 34466667777777776642 234699999999999998888777654
No 172
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=51.49 E-value=25 Score=35.89 Aligned_cols=56 Identities=20% Similarity=0.282 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCc
Q 044068 192 DSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDA 251 (481)
Q Consensus 192 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg 251 (481)
.+.+-++.....+| +..++++|||-||.++...|..|..... .....++-+--|-|
T Consensus 156 ~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~-~~~~~v~v~tFG~P 211 (336)
T KOG4569|consen 156 GLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGL-KTSSPVKVYTFGQP 211 (336)
T ss_pred HHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCC-CCCCceEEEEecCC
Confidence 33344444455666 5689999999999999999999987642 11233444444443
No 173
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=50.80 E-value=87 Score=32.98 Aligned_cols=93 Identities=20% Similarity=0.221 Sum_probs=61.5
Q ss_pred CCCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCch
Q 044068 108 QNSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDE 187 (481)
Q Consensus 108 ~~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~ 187 (481)
+...++|+||..+| |++.. .|.+ .+-|=-=.+|.|.|+. .=-|=|.-.. .|....+..
T Consensus 58 Hk~~drPtV~~T~G--------Y~~~~--~p~r----------~Ept~Lld~NQl~vEh-RfF~~SrP~p-~DW~~Lti~ 115 (448)
T PF05576_consen 58 HKDFDRPTVLYTEG--------YNVST--SPRR----------SEPTQLLDGNQLSVEH-RFFGPSRPEP-ADWSYLTIW 115 (448)
T ss_pred EcCCCCCeEEEecC--------ccccc--Cccc----------cchhHhhccceEEEEE-eeccCCCCCC-CCcccccHh
Confidence 34567899999988 54422 2322 2223234589999997 4444454332 344445788
Q ss_pred hhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHH
Q 044068 188 RTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQ 226 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~ 226 (481)
++|.|.+...+.|=..+| .++.-+|-|=||+-.-+
T Consensus 116 QAA~D~Hri~~A~K~iY~----~kWISTG~SKGGmTa~y 150 (448)
T PF05576_consen 116 QAASDQHRIVQAFKPIYP----GKWISTGGSKGGMTAVY 150 (448)
T ss_pred HhhHHHHHHHHHHHhhcc----CCceecCcCCCceeEEE
Confidence 999999998888866665 36888999999985443
No 174
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=50.74 E-value=21 Score=38.19 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=21.9
Q ss_pred HHHHHHHHHCcCCCCCCEEEEcccccccccHHH
Q 044068 195 TFLLNWFERFPEYKSRAFFLAGESYAGHYIPQV 227 (481)
Q Consensus 195 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 227 (481)
+.+++..+.|--= ..++-|+|||-|++-|-.+
T Consensus 166 kWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 166 KWVRDNIEAFGGD-PQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHhCCC-ccceEEeeccchHHHHHHh
Confidence 5566666666321 3479999999999866554
No 175
>PLN02429 triosephosphate isomerase
Probab=50.55 E-value=38 Score=34.31 Aligned_cols=60 Identities=13% Similarity=0.256 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHHHHH-CcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 188 RTAADSYTFLLNWFER-FPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
+.++.+..++++++.. +.+-....+-|. |||-.-|.=+..+..+. ++.|+.||.+.+++.
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~~------diDG~LVGgASL~~~ 299 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKEE------DIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcCC------CCCEEEeecceecHH
Confidence 4578888899988864 332223344444 99999999999887653 499999999998765
No 176
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=50.12 E-value=17 Score=34.40 Aligned_cols=48 Identities=23% Similarity=0.360 Sum_probs=28.9
Q ss_pred CceEEEEeCCCCccccchhHH-HHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccC
Q 044068 390 GISVYIYSGDTDGMVPTISTR-YSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMV 455 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~-~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmv 455 (481)
+.+||+.+|..|.+.|..-.. ..+++|+=.+. -.+++.+..++|||++
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~------------------~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGF------------------PHNVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCC------------------CCcceEEEcCCCCcee
Confidence 689999999999998876554 44566662222 0157889999999996
No 177
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=48.09 E-value=1.2e+02 Score=29.83 Aligned_cols=59 Identities=22% Similarity=0.139 Sum_probs=42.1
Q ss_pred CchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccC
Q 044068 185 GDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWID 254 (481)
Q Consensus 185 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~d 254 (481)
+.++.++.-.+.|+ +..|+ =|.+|.|.|+||..+=.+|.++..+-. -..-++|.+....
T Consensus 46 ~l~~~a~~yv~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G~-----~Va~L~llD~~~~ 104 (257)
T COG3319 46 SLDDMAAAYVAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQGE-----EVAFLGLLDAVPP 104 (257)
T ss_pred CHHHHHHHHHHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCCC-----eEEEEEEeccCCC
Confidence 66777777666665 56774 399999999999999999999987632 2444455544443
No 178
>PLN02561 triosephosphate isomerase
Probab=46.62 E-value=47 Score=32.61 Aligned_cols=59 Identities=14% Similarity=0.220 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHHHHH-CcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCc
Q 044068 188 RTAADSYTFLLNWFER-FPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp 255 (481)
+.+++++.++++++.+ |..-....+-|. |||-.-|.=+..+... .++.|+.||.+.+|+
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 180 AQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC------CCCCeEEEehHhhHH
Confidence 4577888888888753 432223445454 9999999999988765 459999999999986
No 179
>COG4425 Predicted membrane protein [Function unknown]
Probab=46.45 E-value=40 Score=35.65 Aligned_cols=36 Identities=17% Similarity=0.405 Sum_probs=31.7
Q ss_pred hhhHHHHHHHHHHHHHHCcCCCCCCEEEEccccccc
Q 044068 187 ERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGH 222 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 222 (481)
.++|+.+++++-.+...-|+=..-++|+.|||-|..
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 578999999999999999988777899999999864
No 180
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=44.39 E-value=15 Score=25.63 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=27.4
Q ss_pred ecCcccCcccccchhhhhhhhcccCCHHHHHhhhh
Q 044068 248 MGDAWIDTETGNKGMFDFYWTHALISDEVIHGINS 282 (481)
Q Consensus 248 IGNg~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~ 282 (481)
...|.+||.....-..+-|+..|+|+.+....+.+
T Consensus 9 ~~gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 9 ATGGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TTTSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeeeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 34588999988777778899999999998877643
No 181
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=44.21 E-value=14 Score=35.27 Aligned_cols=51 Identities=20% Similarity=0.189 Sum_probs=36.1
Q ss_pred HHHHHH-HCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 197 LLNWFE-RFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 197 L~~f~~-~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
|..|.+ +|+-...+ ..|+|.|+||.-+-.+|.+..+ .+.+++...|.+++.
T Consensus 102 l~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd--------~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 102 LIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALRHPD--------LFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHSTT--------TESEEEEESEESETT
T ss_pred chhHHHHhcccccce-eEEeccCCCcHHHHHHHHhCcc--------ccccccccCcccccc
Confidence 334443 34433333 8999999999988888876533 389999999888775
No 182
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=39.85 E-value=25 Score=33.05 Aligned_cols=56 Identities=20% Similarity=0.255 Sum_probs=38.2
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccChHHHHHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQPARALAFFSS 469 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dqP~~al~mi~~ 469 (481)
-.+++|.+|+.|-++.+.-...|.+. ..++.+++.+|.|+-.-.-.. ..+.+..
T Consensus 149 P~~~lvi~g~~Ddvv~l~~~l~~~~~-------------------------~~~~~i~i~~a~HFF~gKl~~-l~~~i~~ 202 (210)
T COG2945 149 PSPGLVIQGDADDVVDLVAVLKWQES-------------------------IKITVITIPGADHFFHGKLIE-LRDTIAD 202 (210)
T ss_pred CCCceeEecChhhhhcHHHHHHhhcC-------------------------CCCceEEecCCCceecccHHH-HHHHHHH
Confidence 47899999999966665544444333 246899999999997765543 3344444
Q ss_pred HH
Q 044068 470 FL 471 (481)
Q Consensus 470 fl 471 (481)
|+
T Consensus 203 ~l 204 (210)
T COG2945 203 FL 204 (210)
T ss_pred Hh
Confidence 54
No 183
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=39.50 E-value=59 Score=31.34 Aligned_cols=72 Identities=18% Similarity=0.218 Sum_probs=45.1
Q ss_pred CceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEc-CCCccCCccCh--HHHHHH
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIR-GAGHMVPSSQP--ARALAF 466 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~-~AGHmvP~dqP--~~al~m 466 (481)
..|||+..|+.|.+||.....+|-+.++=.- .++-+++.|++.+.-.+. .+-=.-|.|++ ++|++.
T Consensus 164 k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~-----------~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~ 232 (242)
T KOG3043|consen 164 KAPILFLFAELDEDVPPKDVKAWEEKLKENP-----------AVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQR 232 (242)
T ss_pred CCCEEEEeecccccCCHHHHHHHHHHHhcCc-----------ccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHH
Confidence 5899999999999999999999988876111 122233433332222221 11122466665 567777
Q ss_pred HHHHHc
Q 044068 467 FSSFLD 472 (481)
Q Consensus 467 i~~fl~ 472 (481)
+..|++
T Consensus 233 ~~~Wf~ 238 (242)
T KOG3043|consen 233 FISWFK 238 (242)
T ss_pred HHHHHH
Confidence 777874
No 184
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=38.84 E-value=86 Score=30.51 Aligned_cols=59 Identities=20% Similarity=0.383 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHHHHH-CcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 188 RTAADSYTFLLNWFER-FPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
+.+++.+.++++++.. +.+ ....+-|. |||-.-|.=+..+.+.. ++.|+.||.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC------CCCEEEeehHhhCHH
Confidence 3577888889988864 333 33445454 99999999888887754 399999999988754
No 185
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=38.18 E-value=48 Score=33.39 Aligned_cols=71 Identities=10% Similarity=-0.001 Sum_probs=40.6
Q ss_pred CchhhHHHHHHHHHHHHHHCcC-CCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcccc
Q 044068 185 GDERTAADSYTFLLNWFERFPE-YKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTETG 258 (481)
Q Consensus 185 ~~~~~A~d~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~~q 258 (481)
+-++-++|+-.+++-+-..... +..+++.|.|||=|..=+-.+..+-... ...-.++|+|+-.|+-|.+..
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~---~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPS---PSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT------CCCEEEEEEEEE---TTST
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCcc---ccccceEEEEEeCCCCChhHh
Confidence 5566678877744433333221 3567999999999998777666544221 114669999999999988753
No 186
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=38.11 E-value=32 Score=38.92 Aligned_cols=98 Identities=17% Similarity=0.224 Sum_probs=55.9
Q ss_pred CeEEEEcCCCChh-------hhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCc
Q 044068 114 PLVLWLNGGPGCS-------SFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGD 186 (481)
Q Consensus 114 PlvlWlnGGPGcS-------Sl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~ 186 (481)
=-||++-|--|+- |.. ..-..+||++=..+ ..|+++. +-.-+| ..=-||. ..-.+.
T Consensus 90 IPVLFIPGNAGSyKQvRSiAS~a-~n~y~~~~~e~t~~----~d~~~~~----DFFaVD--FnEe~tA------m~G~~l 152 (973)
T KOG3724|consen 90 IPVLFIPGNAGSYKQVRSIASVA-QNAYQGGPFEKTED----RDNPFSF----DFFAVD--FNEEFTA------MHGHIL 152 (973)
T ss_pred ceEEEecCCCCchHHHHHHHHHH-hhhhcCCchhhhhc----ccCcccc----ceEEEc--ccchhhh------hccHhH
Confidence 3478888877752 222 34556899985444 2466665 333344 1111111 111145
Q ss_pred hhhHHHHHHHHHHHH---HHCcCCC---CCCEEEEcccccccccHHHH
Q 044068 187 ERTAADSYTFLLNWF---ERFPEYK---SRAFFLAGESYAGHYIPQVA 228 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~---~~fp~~~---~~~~yi~GESYgG~yvP~lA 228 (481)
.+.++.+.++++.-+ +.-+||+ ...+.|.||||||..+-+.+
T Consensus 153 ~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~ 200 (973)
T KOG3724|consen 153 LDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATL 200 (973)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHH
Confidence 566777776665444 4445666 56699999999997654433
No 187
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=38.08 E-value=27 Score=28.17 Aligned_cols=28 Identities=29% Similarity=0.498 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEccccc
Q 044068 191 ADSYTFLLNWFERFPEYKSRAFFLAGESYA 220 (481)
Q Consensus 191 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYg 220 (481)
-|+|++.+.|+.+ .|-.+.|.+-|+||+
T Consensus 7 vdIYDAvRaflLr--~Y~~KrfIV~g~S~~ 34 (100)
T PF07389_consen 7 VDIYDAVRAFLLR--HYYDKRFIVYGRSNA 34 (100)
T ss_pred hhHHHHHHHHHHH--HHccceEEEecchHH
Confidence 4788999999987 466788999999993
No 188
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=37.95 E-value=32 Score=34.01 Aligned_cols=42 Identities=24% Similarity=0.170 Sum_probs=32.1
Q ss_pred CCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 209 SRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 209 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
-.++-++|||-||+-+=++|..+. ..+++..++-.+|+-...
T Consensus 119 l~klal~GHSrGGktAFAlALg~a------~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 119 LSKLALSGHSRGGKTAFALALGYA------TSLKFSALIGIDPVAGTS 160 (307)
T ss_pred cceEEEeecCCccHHHHHHHhccc------ccCchhheecccccCCCC
Confidence 347999999999999888887653 256678887777766554
No 189
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=37.68 E-value=29 Score=36.20 Aligned_cols=40 Identities=8% Similarity=0.048 Sum_probs=27.3
Q ss_pred hHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHH
Q 044068 189 TAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTIL 232 (481)
Q Consensus 189 ~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 232 (481)
.+..+-..+++-++. .++++.|.|||+||-++-.+-....
T Consensus 102 ~~~~lk~~ie~~~~~----~~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 102 YFTKLKQLIEEAYKK----NGKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHHHHHHHHh----cCCcEEEEEeCCCchHHHHHHHhcc
Confidence 344444444444432 3789999999999998888777663
No 190
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=37.16 E-value=50 Score=35.37 Aligned_cols=91 Identities=18% Similarity=0.123 Sum_probs=57.0
Q ss_pred cceEEEecCCCCCCCCCC-----CCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHH
Q 044068 159 ANMLFLESPAGVGFSYSN-----TSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQ 233 (481)
Q Consensus 159 anvlyiDqPvG~GfSy~~-----~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 233 (481)
|.|+.+|. +=-|-|... +.-.+ -+.+++-.|+.+|+++-=.+|+.-.+.+++.+|-||.|....-+-.+..+
T Consensus 119 A~v~~lEH-RFYG~S~P~~~~st~nlk~--LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe 195 (514)
T KOG2182|consen 119 ATVFQLEH-RFYGQSSPIGDLSTSNLKY--LSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE 195 (514)
T ss_pred CeeEEeee-eccccCCCCCCCcccchhh--hhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCch
Confidence 67788876 333333211 11123 37789999999999888888876555699999999999766555544433
Q ss_pred hccCCceecceeeeecCcccCcccccc
Q 044068 234 FNKNQTFINLKGLAMGDAWIDTETGNK 260 (481)
Q Consensus 234 ~n~~~~~inLkGi~IGNg~~dp~~q~~ 260 (481)
- +.|-+--.+-+....++.
T Consensus 196 l--------~~GsvASSapv~A~~DF~ 214 (514)
T KOG2182|consen 196 L--------TVGSVASSAPVLAKVDFY 214 (514)
T ss_pred h--------heeecccccceeEEecHH
Confidence 2 444444445454444433
No 191
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=34.45 E-value=73 Score=29.29 Aligned_cols=83 Identities=18% Similarity=0.193 Sum_probs=51.5
Q ss_pred ceEEEecCCCCCC-CCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCC
Q 044068 160 NMLFLESPAGVGF-SYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQ 238 (481)
Q Consensus 160 nvlyiDqPvG~Gf-Sy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 238 (481)
++--|+-|+..+. +|.. +...-+.++...++++..+-| +.++.|+|-|=|+..+-..+.. ......
T Consensus 41 ~~~~V~YpA~~~~~~y~~--------S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~--~~l~~~ 107 (179)
T PF01083_consen 41 AVQGVEYPASLGPNSYGD--------SVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSG--DGLPPD 107 (179)
T ss_dssp EEEE--S---SCGGSCHH--------HHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHH--TTSSHH
T ss_pred EEEecCCCCCCCcccccc--------cHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHh--ccCChh
Confidence 3444666777666 3321 566778888889999999999 5799999999999887777665 000011
Q ss_pred ceeccee-eeecCcccCc
Q 044068 239 TFINLKG-LAMGDAWIDT 255 (481)
Q Consensus 239 ~~inLkG-i~IGNg~~dp 255 (481)
..-++.+ +.+|||.-.+
T Consensus 108 ~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 108 VADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHHEEEEEEES-TTTBT
T ss_pred hhhhEEEEEEecCCcccC
Confidence 1234666 5778877644
No 192
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=34.44 E-value=65 Score=35.49 Aligned_cols=50 Identities=24% Similarity=0.292 Sum_probs=40.5
Q ss_pred HHHhcCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCc
Q 044068 385 ELMTSGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPS 457 (481)
Q Consensus 385 ~Ll~~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~ 457 (481)
.|++-+.+||+..|+.|..|.-...|..-++|.- --..++|.+|+|-.-.
T Consensus 299 ~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-----------------------~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 299 ALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-----------------------EVELHVIGGADHSMAI 348 (784)
T ss_pred hhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-----------------------cceEEEecCCCccccC
Confidence 4666689999999999999999999988888761 1246889999997543
No 193
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=33.60 E-value=1.2e+02 Score=29.68 Aligned_cols=75 Identities=17% Similarity=0.288 Sum_probs=51.7
Q ss_pred eEEEecC--CCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHH-CcCCCCCCEEEEcccccccccHHHHHHHHHhccC
Q 044068 161 MLFLESP--AGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFER-FPEYKSRAFFLAGESYAGHYIPQVALTILQFNKN 237 (481)
Q Consensus 161 vlyiDqP--vG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 237 (481)
+|--+++ +|||-+- +.+.+++++.|+++++.. |. -...++-|. |||-.-|.=+..+...
T Consensus 162 vIAYEPvWAIGtG~~a-----------s~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~--- 223 (250)
T PRK00042 162 VIAYEPVWAIGTGKTA-----------TPEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ--- 223 (250)
T ss_pred EEEECCHHHhCCCCCC-----------CHHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC---
Confidence 4555632 5777552 234588888899988863 32 122344444 9999999999988765
Q ss_pred CceecceeeeecCcccCcc
Q 044068 238 QTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 238 ~~~inLkGi~IGNg~~dp~ 256 (481)
.++.|+.||.+.+++.
T Consensus 224 ---~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 224 ---PDIDGALVGGASLKAE 239 (250)
T ss_pred ---CCCCEEEEeeeeechH
Confidence 3499999999988764
No 194
>PRK14565 triosephosphate isomerase; Provisional
Probab=33.50 E-value=89 Score=30.36 Aligned_cols=53 Identities=17% Similarity=0.347 Sum_probs=40.4
Q ss_pred hhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 187 ERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
.+.+++.+.+++++. .+.-|. |||-.-|.-+..+.+.. ++.|+.||.+.+++.
T Consensus 173 ~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~~------~iDG~LvG~asl~~~ 225 (237)
T PRK14565 173 NDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSIN------QLSGVLVGSASLDVD 225 (237)
T ss_pred HHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcCC------CCCEEEEechhhcHH
Confidence 455888888888752 233333 99999999999987753 499999999999875
No 195
>PTZ00333 triosephosphate isomerase; Provisional
Probab=33.43 E-value=98 Score=30.40 Aligned_cols=60 Identities=15% Similarity=0.308 Sum_probs=44.0
Q ss_pred hhhHHHHHHHHHHHHHH-CcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCc
Q 044068 187 ERTAADSYTFLLNWFER-FPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp 255 (481)
.+.+++++.++++++.. |.+......-|. |||-.-|.=+..+... .++.|+.||.+.+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ------PDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC------CCCCEEEEehHhhhh
Confidence 45688888889988863 332223344444 9999999999988765 349999999988874
No 196
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=33.17 E-value=32 Score=31.40 Aligned_cols=66 Identities=23% Similarity=0.317 Sum_probs=43.3
Q ss_pred CCCCeEEEEcCCCChhhhhhhhhhhcCC----eEEcCCCCccccCCcC--cccccceEEEecCCCCCCCC-CCC
Q 044068 111 STKPLVLWLNGGPGCSSFGFGAMMELGP----FRVNSDGKSLSHNEYA--WNNVANMLFLESPAGVGFSY-SNT 177 (481)
Q Consensus 111 ~~~PlvlWlnGGPGcSSl~~g~f~E~GP----~~~~~~~~~l~~n~~s--W~~~anvlyiDqPvG~GfSy-~~~ 177 (481)
+..+|=|-+.|| |||++.|++=.+.-| ..+..++-++.-.+.+ +-+-+.|=|+|...|.||-+ .++
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f~~NP 148 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNP 148 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEEecCC
Confidence 345788999988 999965554433322 3444444444444444 45677888999999999987 443
No 197
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=33.04 E-value=53 Score=32.33 Aligned_cols=66 Identities=21% Similarity=0.197 Sum_probs=38.6
Q ss_pred CchhhHHHHHHHHHHHHH-HCcCC---CCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCccc
Q 044068 185 GDERTAADSYTFLLNWFE-RFPEY---KSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWI 253 (481)
Q Consensus 185 ~~~~~A~d~~~fL~~f~~-~fp~~---~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~ 253 (481)
.+.+.+.++.++|.+=++ ..|.. --.++.|+|||=||+-+-.+|....+ ....+++++++..+|+-
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~---~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNAS---SSLDLRFSALILLDPVD 131 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcc---cccccceeEEEEecccc
Confidence 344556666665554222 12210 12369999999999955444443311 12357899999988866
No 198
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=32.73 E-value=1.9e+02 Score=29.54 Aligned_cols=121 Identities=21% Similarity=0.263 Sum_probs=69.6
Q ss_pred CceeEEEEEEeCCCCCCCeEEEEcCCCChhhhhh-----hhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCC
Q 044068 97 GRALFYYFVESQNSSTKPLVLWLNGGPGCSSFGF-----GAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVG 171 (481)
Q Consensus 97 ~~~lFywffes~~p~~~PlvlWlnGGPGcSSl~~-----g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~G 171 (481)
+.-.+.|.-.- .....|+||-++|==|.|.-.| ..+.+-| ..++-.+ -.|-|
T Consensus 60 ~~~~ldw~~~p-~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg---------------------~~~Vv~~-~Rgcs 116 (345)
T COG0429 60 GFIDLDWSEDP-RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG---------------------WLVVVFH-FRGCS 116 (345)
T ss_pred CEEEEeeccCc-cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC---------------------CeEEEEe-ccccc
Confidence 34455555422 2244599999999777764211 2222222 3455566 58888
Q ss_pred CCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCc
Q 044068 172 FSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDA 251 (481)
Q Consensus 172 fSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg 251 (481)
.+-.....-|. ..+. +|+..||..--+++| .+++|.+|-|.||. .+|..+.++-. .....+++++-+|
T Consensus 117 ~~~n~~p~~yh-~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~--d~~~~aa~~vs~P 184 (345)
T COG0429 117 GEANTSPRLYH-SGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGD--DLPLDAAVAVSAP 184 (345)
T ss_pred CCcccCcceec-ccch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhcc--CcccceeeeeeCH
Confidence 77543333232 1332 666666655555676 68999999999994 45555555432 1233566666665
Q ss_pred c
Q 044068 252 W 252 (481)
Q Consensus 252 ~ 252 (481)
+
T Consensus 185 ~ 185 (345)
T COG0429 185 F 185 (345)
T ss_pred H
Confidence 4
No 199
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=32.16 E-value=56 Score=31.98 Aligned_cols=50 Identities=16% Similarity=0.093 Sum_probs=36.2
Q ss_pred CceEEEEeCCCCccccc-hhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCCccC
Q 044068 390 GISVYIYSGDTDGMVPT-ISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVPSSQ 459 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~-~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP~dq 459 (481)
..+++|.+|..|..++. ...+.+.+.|+=.+. +.++..+.|+||--..-.
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~--------------------~v~~~~~~g~~H~f~~~~ 261 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAAGQ--------------------ALTLRRQAGYDHSYYFIA 261 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHcCC--------------------CeEEEEeCCCCccchhHH
Confidence 46899999999999998 455566666551111 468899999999765443
No 200
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.56 E-value=63 Score=33.33 Aligned_cols=117 Identities=15% Similarity=0.271 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCCCChhhhhhhhhhhcCCeEE----cCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCc
Q 044068 111 STKPLVLWLNGGPGCSSFGFGAMMELGPFRV----NSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGD 186 (481)
Q Consensus 111 ~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~----~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~ 186 (481)
..+-+++++|| |.+=+|=++++. .+.+...+.=-+||-..++++ ||- -|
T Consensus 114 ~~k~vlvFvHG--------fNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~--------~Yn-----------~D 166 (377)
T COG4782 114 SAKTVLVFVHG--------FNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLL--------GYN-----------YD 166 (377)
T ss_pred CCCeEEEEEcc--------cCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeee--------ecc-----------cc
Confidence 67899999999 777777777763 222222222334554444321 222 22
Q ss_pred hhhHHHHHHHHHHHHH---HCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 187 ERTAADSYTFLLNWFE---RFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~---~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
.+.++.-...|+.+++ +-+ .-.++||..||+|.-.+-..-.++.-++.......++=+++-.|-+|-.
T Consensus 167 reS~~~Sr~aLe~~lr~La~~~--~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 167 RESTNYSRPALERLLRYLATDK--PVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred hhhhhhhHHHHHHHHHHHHhCC--CCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 3333333333333333 222 2467999999999876666666665444311456677778777766654
No 201
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=30.03 E-value=48 Score=27.07 Aligned_cols=17 Identities=24% Similarity=0.464 Sum_probs=13.0
Q ss_pred eEEEEcCCCChhhhhhhh
Q 044068 115 LVLWLNGGPGCSSFGFGA 132 (481)
Q Consensus 115 lvlWlnGGPGcSSl~~g~ 132 (481)
|=|-+.|| |||++.|++
T Consensus 28 LRi~v~~g-GCsG~~Y~~ 44 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFNL 44 (92)
T ss_pred EEEEEeCC-CccCcccce
Confidence 77888887 999975544
No 202
>COG3150 Predicted esterase [General function prediction only]
Probab=29.84 E-value=48 Score=30.53 Aligned_cols=58 Identities=9% Similarity=0.078 Sum_probs=42.2
Q ss_pred CchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcccccc
Q 044068 185 GDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTETGNK 260 (481)
Q Consensus 185 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~~q~~ 260 (481)
...++++.+...++ ++..+..-|+|-|-||.|+-.|+.+.- |+. +|.||-+-|.....
T Consensus 41 ~p~~a~~ele~~i~-------~~~~~~p~ivGssLGGY~At~l~~~~G----------ira-v~~NPav~P~e~l~ 98 (191)
T COG3150 41 DPQQALKELEKAVQ-------ELGDESPLIVGSSLGGYYATWLGFLCG----------IRA-VVFNPAVRPYELLT 98 (191)
T ss_pred CHHHHHHHHHHHHH-------HcCCCCceEEeecchHHHHHHHHHHhC----------Chh-hhcCCCcCchhhhh
Confidence 56677777777666 566777999999999999888887551 333 46688887765433
No 203
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=29.03 E-value=43 Score=31.29 Aligned_cols=28 Identities=14% Similarity=0.020 Sum_probs=24.3
Q ss_pred ceEEEEeCCCCccccchhHHHHHHhcCc
Q 044068 391 ISVYIYSGDTDGMVPTISTRYSINKLEA 418 (481)
Q Consensus 391 irVliy~Gd~D~i~~~~g~~~~i~~L~w 418 (481)
-+++|++|+.|.+||....+...+.|+.
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 4578999999999999999999888763
No 204
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=28.50 E-value=53 Score=31.47 Aligned_cols=26 Identities=15% Similarity=0.312 Sum_probs=22.8
Q ss_pred CceEEEEeCCCCccccchhHHHHHHh
Q 044068 390 GISVYIYSGDTDGMVPTISTRYSINK 415 (481)
Q Consensus 390 ~irVliy~Gd~D~i~~~~g~~~~i~~ 415 (481)
+++++|++|+.|..|+....++.++.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q 194 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQ 194 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHH
Confidence 57899999999999999988877765
No 205
>PRK11190 Fe/S biogenesis protein NfuA; Provisional
Probab=27.98 E-value=42 Score=31.50 Aligned_cols=62 Identities=16% Similarity=0.250 Sum_probs=36.4
Q ss_pred EEEEcCCCChhhhhhhhhh----hc--CCeEEcCCCCccccCCcC--cccccceEEEecCCCCCCCCCCCC
Q 044068 116 VLWLNGGPGCSSFGFGAMM----EL--GPFRVNSDGKSLSHNEYA--WNNVANMLFLESPAGVGFSYSNTS 178 (481)
Q Consensus 116 vlWlnGGPGcSSl~~g~f~----E~--GP~~~~~~~~~l~~n~~s--W~~~anvlyiDqPvG~GfSy~~~~ 178 (481)
=|-+.| +|||++.|++=+ |. +=..+..++-++.-.+.| +-+-+-|=|+|...|.||.+.++.
T Consensus 26 RI~V~~-gGCsG~~Y~~~~~~~~~~~~~D~v~e~~gv~v~Vd~~S~~~L~G~~IDyve~~~g~gF~f~NPN 95 (192)
T PRK11190 26 RVFVIN-PGTPNAECGVSYCPPDAVEATDTELKFDGFSAYVDELSAPFLEDAEIDFVTDQLGSQLTLKAPN 95 (192)
T ss_pred EEEEEC-CCcCCceeeeEEeecCCCCCCCEEEEeCCEEEEECcchHhHhCCCEEEEeecCCCCceEEECCC
Confidence 333444 488865444333 11 123333334344444444 557788999999999999996654
No 206
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=27.92 E-value=31 Score=35.97 Aligned_cols=38 Identities=24% Similarity=0.219 Sum_probs=23.2
Q ss_pred CEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCccc
Q 044068 211 AFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTET 257 (481)
Q Consensus 211 ~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~~ 257 (481)
++.++||||||--+-..+.+- ..++..++.+||.-|..
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d---------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQD---------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH----------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHHhhc---------cCcceEEEeCCcccCCC
Confidence 689999999997655444322 23788889999998864
No 207
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=27.44 E-value=69 Score=33.72 Aligned_cols=57 Identities=5% Similarity=0.089 Sum_probs=41.5
Q ss_pred HHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcccc
Q 044068 195 TFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTETG 258 (481)
Q Consensus 195 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~~q 258 (481)
+.|.+|++.- +.++++.|-+-||..+-..+..+.+.+. +-..+++.+..+-+|....
T Consensus 157 ~~l~~~i~~~----G~~v~l~GvCqgG~~~laa~Al~a~~~~---p~~~~sltlm~~PID~~~~ 213 (406)
T TIGR01849 157 DYLIEFIRFL----GPDIHVIAVCQPAVPVLAAVALMAENEP---PAQPRSMTLMGGPIDARAS 213 (406)
T ss_pred HHHHHHHHHh----CCCCcEEEEchhhHHHHHHHHHHHhcCC---CCCcceEEEEecCccCCCC
Confidence 3555555432 5569999999999988888877766542 3348998888888987643
No 208
>COG3896 Chloramphenicol 3-O-phosphotransferase [Defense mechanisms]
Probab=27.11 E-value=45 Score=30.47 Aligned_cols=27 Identities=37% Similarity=0.577 Sum_probs=21.8
Q ss_pred CCeEEEEcCCC--Chhhhhhhhhhhc--CCeE
Q 044068 113 KPLVLWLNGGP--GCSSFGFGAMMEL--GPFR 140 (481)
Q Consensus 113 ~PlvlWlnGGP--GcSSl~~g~f~E~--GP~~ 140 (481)
.--|+-||||| |-||+. -.|+|+ ||+.
T Consensus 22 ~griVlLNG~~saGKSSiA-~A~Q~~~a~pwm 52 (205)
T COG3896 22 EGRIVLLNGGSSAGKSSIA-LAFQDLAAEPWM 52 (205)
T ss_pred CceEEEecCCCccchhHHH-HHHHHHhhcchh
Confidence 34588899999 889995 889987 7874
No 209
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=27.08 E-value=39 Score=31.57 Aligned_cols=54 Identities=15% Similarity=0.129 Sum_probs=35.6
Q ss_pred hhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCc
Q 044068 188 RTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDA 251 (481)
Q Consensus 188 ~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg 251 (481)
.+.+++.. ..++++..|+....++.++|-|+||+++-.+|.+- -.+++.+.-=|
T Consensus 77 ~~~~~~~a-a~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~---------~~~~a~v~~yg 130 (218)
T PF01738_consen 77 QVAADLQA-AVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD---------PRVDAAVSFYG 130 (218)
T ss_dssp HHHHHHHH-HHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT---------TTSSEEEEES-
T ss_pred HHHHHHHH-HHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc---------cccceEEEEcC
Confidence 44455544 45566777766677999999999999887766432 12566666544
No 210
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=27.05 E-value=54 Score=34.90 Aligned_cols=74 Identities=20% Similarity=0.215 Sum_probs=48.6
Q ss_pred ceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeec---ceEEEEEcCCC---ccCCccChHHHH
Q 044068 391 ISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQ---NLTFVAIRGAG---HMVPSSQPARAL 464 (481)
Q Consensus 391 irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~---nltf~~V~~AG---HmvP~dqP~~al 464 (481)
++=-++.||=|-.||.... .+.. +|.+++.. .+ ++ +.+.+. .+.+....|+- |+--.-.+ +.+
T Consensus 374 ~~~~~~~~DGDgTVp~~S~-~~c~--~w~g~~~~-----~~-~~-~~~~~~~~~~~~~~~~~G~~~a~Hv~ilg~~-~l~ 442 (473)
T KOG2369|consen 374 LKGGIFYGDGDGTVPLVSA-SMCA--NWQGKQFN-----AG-IA-VTREEDKHQPVNLDESHGSSSAEHVDILGDE-ELL 442 (473)
T ss_pred ccCceeecCCCCccchHHH-Hhhh--hhhccccc-----cc-cc-cccccccCCCccccccCCccchhhhhhccCh-HHH
Confidence 4445888999999999988 4444 88888644 11 22 333332 47778888887 77655554 566
Q ss_pred HHHHHHHcCCC
Q 044068 465 AFFSSFLDGKL 475 (481)
Q Consensus 465 ~mi~~fl~~~~ 475 (481)
+.|.+.+.+..
T Consensus 443 e~i~k~~~g~~ 453 (473)
T KOG2369|consen 443 EEILKVLLGAI 453 (473)
T ss_pred HHHHHHhccCC
Confidence 66777776654
No 211
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=26.78 E-value=1.2e+02 Score=34.02 Aligned_cols=61 Identities=16% Similarity=0.282 Sum_probs=45.4
Q ss_pred hhhHHHHHHHHHHHHHH-CcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 187 ERTAADSYTFLLNWFER-FPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
.+.|++++.|+++++.. |-+-....+=|. |||---|.=+..|.... ++.|+.||...+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~------diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQP------DIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCC------CCCeEEeehHhcCHH
Confidence 45688899999999863 322212233333 99999999999998764 499999999888875
No 212
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=26.33 E-value=1.7e+02 Score=29.03 Aligned_cols=94 Identities=20% Similarity=0.253 Sum_probs=57.1
Q ss_pred CCCCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCC--CCCCCCCCCCccCCc
Q 044068 109 NSSTKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVG--FSYSNTSSDYVMNGD 186 (481)
Q Consensus 109 ~p~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~G--fSy~~~~~~~~~~~~ 186 (481)
.++..|+|+|=-=|=.|||.+++.|.| +..| ++= .-+.=+| +|-| -|+- ...
T Consensus 20 s~s~~P~ii~HGigd~c~~~~~~~~~q------------~l~~-~~g---~~v~~le--ig~g~~~s~l--------~pl 73 (296)
T KOG2541|consen 20 SPSPVPVIVWHGIGDSCSSLSMANLTQ------------LLEE-LPG---SPVYCLE--IGDGIKDSSL--------MPL 73 (296)
T ss_pred CcccCCEEEEeccCcccccchHHHHHH------------HHHh-CCC---CeeEEEE--ecCCcchhhh--------ccH
Confidence 344589999987788999844466663 2212 211 1223344 5555 2221 144
Q ss_pred hhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHH
Q 044068 187 ERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQ 233 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 233 (481)
.+.++-..+.+. .-|++ .+-++|.|.|=||..+-+++...-.
T Consensus 74 ~~Qv~~~ce~v~----~m~~l-sqGynivg~SQGglv~Raliq~cd~ 115 (296)
T KOG2541|consen 74 WEQVDVACEKVK----QMPEL-SQGYNIVGYSQGGLVARALIQFCDN 115 (296)
T ss_pred HHHHHHHHHHHh----cchhc-cCceEEEEEccccHHHHHHHHhCCC
Confidence 455555555554 44554 4689999999999988888876644
No 213
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=25.68 E-value=2.1e+02 Score=30.92 Aligned_cols=33 Identities=12% Similarity=0.163 Sum_probs=22.2
Q ss_pred HHHHHHHHHCcCCCCCCEEEEcccccccccHHHH
Q 044068 195 TFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVA 228 (481)
Q Consensus 195 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 228 (481)
+++++....|- =-.+++-|+|||.||..|-.+.
T Consensus 181 ~wv~~~I~~FG-Gdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 181 RWVKDNIPSFG-GDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHhcC-CCCCeEEEEeechhHHHHHHHh
Confidence 45555555553 1245799999999999885543
No 214
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=25.60 E-value=40 Score=22.71 Aligned_cols=12 Identities=33% Similarity=1.043 Sum_probs=6.2
Q ss_pred CCeEEEEcCCCC
Q 044068 113 KPLVLWLNGGPG 124 (481)
Q Consensus 113 ~PlvlWlnGGPG 124 (481)
.--.||++|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 345789999887
No 215
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=25.31 E-value=49 Score=32.22 Aligned_cols=61 Identities=18% Similarity=0.328 Sum_probs=42.2
Q ss_pred hhhHHHHHHHHHHHHHH-CcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 187 ERTAADSYTFLLNWFER-FPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
.+.++.++.++++++.. |.+-..+++-|. |||---|.=+..+... .++.|+.||.+.+++.
T Consensus 177 ~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~------~~iDG~LVG~asl~~~ 238 (244)
T PF00121_consen 177 PEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQ------PDIDGVLVGGASLKAE 238 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTS------TT-SEEEESGGGGSTH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcC------CCCCEEEEchhhhccc
Confidence 45688888889888753 211122334443 8999999888877665 3599999999998875
No 216
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=25.29 E-value=64 Score=29.64 Aligned_cols=44 Identities=18% Similarity=0.157 Sum_probs=33.3
Q ss_pred ceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCC
Q 044068 391 ISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVP 456 (481)
Q Consensus 391 irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP 456 (481)
-|++|++|+.|.+++ .++.+.++|+=.|. ..++..+.|++|-..
T Consensus 167 Pp~~i~~g~~D~l~~--~~~~~~~~L~~~gv--------------------~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 167 PPTLIIHGEDDVLVD--DSLRFAEKLKKAGV--------------------DVELHVYPGMPHGFF 210 (211)
T ss_dssp HEEEEEEETTSTTHH--HHHHHHHHHHHTT---------------------EEEEEEETTEETTGG
T ss_pred CCeeeeccccccchH--HHHHHHHHHHHCCC--------------------CEEEEEECCCeEEee
Confidence 589999999999874 56788888872222 458889999999654
No 217
>PRK06762 hypothetical protein; Provisional
Probab=25.09 E-value=41 Score=30.01 Aligned_cols=13 Identities=15% Similarity=0.493 Sum_probs=11.8
Q ss_pred CeEEEEcCCCChh
Q 044068 114 PLVLWLNGGPGCS 126 (481)
Q Consensus 114 PlvlWlnGGPGcS 126 (481)
|.++|+.|.|||-
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999999886
No 218
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=24.83 E-value=1.3e+02 Score=33.37 Aligned_cols=82 Identities=22% Similarity=0.322 Sum_probs=50.9
Q ss_pred HHHHHHHh----cCceEEEEeCCCCccccchhHHHHHHhcCcCcccceeeeeecCeeceEEEeecceEEEEEcCCCccCC
Q 044068 381 PSIQELMT----SGISVYIYSGDTDGMVPTISTRYSINKLEAKVKTAWYPWYIQGEVGGYVVGYQNLTFVAIRGAGHMVP 456 (481)
Q Consensus 381 ~~l~~Ll~----~~irVliy~Gd~D~i~~~~g~~~~i~~L~w~~~~~~~~w~~~~~~aG~~k~~~nltf~~V~~AGHmvP 456 (481)
.-+.+++- +|.|.+|.+|..|.++|..-+.+-.-.|+- ++.|- -..|.|+.|.+|=|+=.
T Consensus 542 ~gv~~v~~tg~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~-------------~~eG~---~s~lrYyeV~naqHfDa 605 (690)
T PF10605_consen 542 AGVAEVRLTGNLHGKPAIIVHGRSDALLPVNHTSRPYLGLNR-------------QVEGR---ASRLRYYEVTNAQHFDA 605 (690)
T ss_pred HHHHHHHhcCCcCCCceEEEecccceecccCCCchHHHHHhh-------------hhccc---ccceeEEEecCCeechh
Confidence 33555553 378999999999999998766554433331 11110 12588899999988732
Q ss_pred ------ccCh--------HHHHHHHHHHH-cCCCCCC
Q 044068 457 ------SSQP--------ARALAFFSSFL-DGKLPPA 478 (481)
Q Consensus 457 ------~dqP--------~~al~mi~~fl-~~~~~~~ 478 (481)
+|.+ .+|++++-.+| .|.++|.
T Consensus 606 f~~~pG~~~r~VPlh~Y~~qALd~M~a~L~~G~~LPp 642 (690)
T PF10605_consen 606 FLDFPGFDTRFVPLHPYFFQALDLMWAHLKSGAALPP 642 (690)
T ss_pred hccCCCCCcccccccHHHHHHHHHHHHHhhcCCCCCc
Confidence 1222 56777666655 4677764
No 219
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=23.67 E-value=1.1e+02 Score=33.60 Aligned_cols=83 Identities=22% Similarity=0.220 Sum_probs=59.2
Q ss_pred cceEEEecCCCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCC
Q 044068 159 ANMLFLESPAGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQ 238 (481)
Q Consensus 159 anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 238 (481)
.-++..| =.|.|-|-+.-.. +. + +-++|-++ +.+|..+-|.-. -++-..|-||+|.-.-++|..
T Consensus 81 YavV~qD-vRG~~~SeG~~~~-~~--~--~E~~Dg~D-~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~-------- 144 (563)
T COG2936 81 YAVVNQD-VRGRGGSEGVFDP-ES--S--REAEDGYD-TIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAAL-------- 144 (563)
T ss_pred eEEEEec-ccccccCCcccce-ec--c--ccccchhH-HHHHHHhCCccC-CeeeeecccHHHHHHHHHHhc--------
Confidence 5678888 5999999876432 11 3 23556666 667887777554 489999999999877666641
Q ss_pred ceecceeeeecCcccCccc
Q 044068 239 TFINLKGLAMGDAWIDTET 257 (481)
Q Consensus 239 ~~inLkGi~IGNg~~dp~~ 257 (481)
.+-.||.|+.--|..|-..
T Consensus 145 ~pPaLkai~p~~~~~D~y~ 163 (563)
T COG2936 145 QPPALKAIAPTEGLVDRYR 163 (563)
T ss_pred CCchheeeccccccccccc
Confidence 2556999999988888643
No 220
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=23.61 E-value=1.3e+02 Score=32.31 Aligned_cols=113 Identities=18% Similarity=0.338 Sum_probs=65.9
Q ss_pred eeEEEEEEeCCCCCCCeEEEEcCCCChhhhhhhhhh--hcC-CeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCC
Q 044068 99 ALFYYFVESQNSSTKPLVLWLNGGPGCSSFGFGAMM--ELG-PFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYS 175 (481)
Q Consensus 99 ~lFywffes~~p~~~PlvlWlnGGPGcSSl~~g~f~--E~G-P~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~ 175 (481)
.++|+|-+- .-.-||.+.+.|==..=+.. |.|+ .+| ||.+ +=| |.=-|-++-
T Consensus 277 Ei~yYFnPG--D~KPPL~VYFSGyR~aEGFE-gy~MMk~Lg~PfLL---------------------~~D-pRleGGaFY 331 (511)
T TIGR03712 277 EFIYYFNPG--DFKPPLNVYFSGYRPAEGFE-GYFMMKRLGAPFLL---------------------IGD-PRLEGGAFY 331 (511)
T ss_pred eeEEecCCc--CCCCCeEEeeccCcccCcch-hHHHHHhcCCCeEE---------------------eec-cccccceee
Confidence 455555443 13469999999965555542 4444 332 6554 444 344444442
Q ss_pred CCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCc
Q 044068 176 NTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDT 255 (481)
Q Consensus 176 ~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp 255 (481)
- ..++.=+.+.+.+++-++.- .|..+++.|.|=|+|--=+-+.++ +++=++|++|=|+++-
T Consensus 332 l--------Gs~eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga----------~l~P~AIiVgKPL~NL 392 (511)
T TIGR03712 332 L--------GSDEYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA----------KLSPHAIIVGKPLVNL 392 (511)
T ss_pred e--------CcHHHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc----------cCCCceEEEcCcccch
Confidence 2 22223334444455444432 577899999999998654444443 5667888898888764
No 221
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=23.32 E-value=99 Score=32.47 Aligned_cols=45 Identities=22% Similarity=0.408 Sum_probs=38.0
Q ss_pred CchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHH
Q 044068 185 GDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTIL 232 (481)
Q Consensus 185 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 232 (481)
+.++.|.|+-. |..|+.+ +.+.+++.+.|-|+|.-..|.+-.++.
T Consensus 304 tPe~~a~Dl~r-~i~~y~~--~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 304 TPEQIAADLSR-LIRFYAR--RWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred CHHHHHHHHHH-HHHHHHH--hhCcceEEEEeecccchhhHHHHHhCC
Confidence 77889999988 6677776 677899999999999999998777663
No 222
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=22.63 E-value=69 Score=32.56 Aligned_cols=88 Identities=19% Similarity=0.308 Sum_probs=51.5
Q ss_pred ccceEEEecCCCCC-CCCCC----------CCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHH
Q 044068 158 VANMLFLESPAGVG-FSYSN----------TSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQ 226 (481)
Q Consensus 158 ~anvlyiDqPvG~G-fSy~~----------~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~ 226 (481)
..-|+|-||=|||| |--.- ...-+. .+..+-.+..|.||...|+- +..+|++|-|=|...+-.
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg-~gL~~nI~~AYrFL~~~yep-----GD~Iy~FGFSRGAf~aRV 138 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFG-QGLVQNIREAYRFLIFNYEP-----GDEIYAFGFSRGAFSARV 138 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHH-HHHHHHHHHHHHHHHHhcCC-----CCeEEEeeccchhHHHHH
Confidence 45689999999987 21100 001111 13344556678888876652 567999999998654444
Q ss_pred HHHHHHHhccCCceecceeeeecCcccCcccccchhhhhhhhc
Q 044068 227 VALTILQFNKNQTFINLKGLAMGDAWIDTETGNKGMFDFYWTH 269 (481)
Q Consensus 227 lA~~i~~~n~~~~~inLkGi~IGNg~~dp~~q~~~~~~~~~~~ 269 (481)
+|.-| =--|+++-.+ ....+++|.|
T Consensus 139 lagmi----------------r~vGlls~~~--~~~~d~Aw~~ 163 (423)
T COG3673 139 LAGMI----------------RHVGLLSRKH--AARIDEAWAH 163 (423)
T ss_pred HHHHH----------------HHhhhhcccc--HHHHHHHHHH
Confidence 44333 2335555433 4567777764
No 223
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=21.88 E-value=1.6e+02 Score=30.44 Aligned_cols=103 Identities=18% Similarity=0.336 Sum_probs=63.5
Q ss_pred CCCCeEEEEcCCCChhhhhhhhhhhcCCeEEcCCCCccccCCcCcccccceEEEecCCCCCCCCCCCCCCCccCCchhhH
Q 044068 111 STKPLVLWLNGGPGCSSFGFGAMMELGPFRVNSDGKSLSHNEYAWNNVANMLFLESPAGVGFSYSNTSSDYVMNGDERTA 190 (481)
Q Consensus 111 ~~~PlvlWlnGGPGcSSl~~g~f~E~GP~~~~~~~~~l~~n~~sW~~~anvlyiDqPvG~GfSy~~~~~~~~~~~~~~~A 190 (481)
.-..|||...|-- -|+|.|=..-- ..+.+--..||. +|.+-|.+. .+++ ++..++
T Consensus 241 ngq~LvIC~EGNA--------GFYEvG~m~tP---~~lgYsvLGwNh----------PGFagSTG~---P~p~-n~~nA~ 295 (517)
T KOG1553|consen 241 NGQDLVICFEGNA--------GFYEVGVMNTP---AQLGYSVLGWNH----------PGFAGSTGL---PYPV-NTLNAA 295 (517)
T ss_pred CCceEEEEecCCc--------cceEeeeecCh---HHhCceeeccCC----------CCccccCCC---CCcc-cchHHH
Confidence 3467888877753 36777743210 012233334552 566656443 3454 666666
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCc
Q 044068 191 ADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDA 251 (481)
Q Consensus 191 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg 251 (481)
+.+.+|-.+=+ .|+..++.|.|-|-||--+...|.- .-++|++++-.-
T Consensus 296 DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~---------YPdVkavvLDAt 343 (517)
T KOG1553|consen 296 DAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN---------YPDVKAVVLDAT 343 (517)
T ss_pred HHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc---------CCCceEEEeecc
Confidence 66666555433 5667899999999999988777753 456899877543
No 224
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=21.57 E-value=92 Score=32.67 Aligned_cols=35 Identities=43% Similarity=0.831 Sum_probs=26.1
Q ss_pred eeEEeEEEecCCCCceeEEEEEEe-CCCCCCCeE-EEEcC
Q 044068 84 DQYSGYVTVDPKAGRALFYYFVES-QNSSTKPLV-LWLNG 121 (481)
Q Consensus 84 ~~ysGyl~v~~~~~~~lFywffes-~~p~~~Plv-lWlnG 121 (481)
...+|||+.+++ +++.+ ..|+ ....+-||| +||.|
T Consensus 199 ~~k~GfLTmDqt--Rkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 199 TYKSGFLTMDQT--RKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred ccccceeeEccc--cceEE-EeccCCCccCCCceeeEecC
Confidence 357999999864 77877 7788 444566865 99987
No 225
>PRK15492 triosephosphate isomerase; Provisional
Probab=21.26 E-value=2e+02 Score=28.37 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=44.8
Q ss_pred hhhHHHHHHHHHHHHH-HCcCCCCCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccCcc
Q 044068 187 ERTAADSYTFLLNWFE-RFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWIDTE 256 (481)
Q Consensus 187 ~~~A~d~~~fL~~f~~-~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~dp~ 256 (481)
.+.+++..+++++++. .+-+- ..++-|. |||-.-|.-+..+.... ++.|+.||..-+++.
T Consensus 188 ~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~------diDG~LvG~aSl~~~ 248 (260)
T PRK15492 188 ADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQP------HIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCC------CCCEEEeehhhcCHH
Confidence 3456888888998865 33221 2345555 99999999999998764 499999999988875
No 226
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=20.82 E-value=1.2e+02 Score=27.73 Aligned_cols=39 Identities=8% Similarity=-0.030 Sum_probs=28.4
Q ss_pred CCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCcccC
Q 044068 209 SRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDAWID 254 (481)
Q Consensus 209 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg~~d 254 (481)
..+.+|+|||.|+.-+-..+. .+ ...+++|+++..|.-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~---~~----~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA---EQ----SQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH---HT----CCSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh---hc----ccccccEEEEEcCCCc
Confidence 567999999999987766665 21 2567999999999854
No 227
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=20.81 E-value=88 Score=28.98 Aligned_cols=35 Identities=14% Similarity=0.133 Sum_probs=27.9
Q ss_pred CCCEEEEcccccccccHHHHHHHHHhccCCceecceeeeecCc
Q 044068 209 SRAFFLAGESYAGHYIPQVALTILQFNKNQTFINLKGLAMGDA 251 (481)
Q Consensus 209 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~IGNg 251 (481)
.++.||++||-|+.-+...+.++.. .++|+++..|
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~--------~V~GalLVAp 92 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR--------QVAGALLVAP 92 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh--------ccceEEEecC
Confidence 5789999999999777777776643 3899988765
No 228
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=20.78 E-value=1.1e+02 Score=28.12 Aligned_cols=27 Identities=19% Similarity=0.279 Sum_probs=23.0
Q ss_pred CCCCCCEEEEcccccccccHHHHHHHH
Q 044068 206 EYKSRAFFLAGESYAGHYIPQVALTIL 232 (481)
Q Consensus 206 ~~~~~~~yi~GESYgG~yvP~lA~~i~ 232 (481)
.+..-|+.|-|.||||.....+|..+.
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~ 111 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQ 111 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhc
Confidence 455669999999999999999998773
No 229
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=20.51 E-value=58 Score=18.32 Aligned_cols=12 Identities=58% Similarity=0.902 Sum_probs=7.4
Q ss_pred ChHHHHHHHHHH
Q 044068 1 MKVVFALLLLLL 12 (481)
Q Consensus 1 ~~~~~~~~~~~~ 12 (481)
||+|..|..||+
T Consensus 2 Mk~vIIlvvLLl 13 (19)
T PF13956_consen 2 MKLVIILVVLLL 13 (19)
T ss_pred ceehHHHHHHHh
Confidence 677776555554
No 230
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=20.29 E-value=46 Score=33.17 Aligned_cols=23 Identities=22% Similarity=0.408 Sum_probs=16.9
Q ss_pred CCCCCCEEEEcccccccccHHHH
Q 044068 206 EYKSRAFFLAGESYAGHYIPQVA 228 (481)
Q Consensus 206 ~~~~~~~yi~GESYgG~yvP~lA 228 (481)
.|-...++++|||-||..+..+.
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG 294 (425)
T COG5153 272 IYPDARIWLTGHSLGGAIASLLG 294 (425)
T ss_pred hCCCceEEEeccccchHHHHHhc
Confidence 44467899999999997554444
No 231
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=20.29 E-value=46 Score=33.17 Aligned_cols=23 Identities=22% Similarity=0.408 Sum_probs=16.9
Q ss_pred CCCCCCEEEEcccccccccHHHH
Q 044068 206 EYKSRAFFLAGESYAGHYIPQVA 228 (481)
Q Consensus 206 ~~~~~~~yi~GESYgG~yvP~lA 228 (481)
.|-...++++|||-||..+..+.
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG 294 (425)
T KOG4540|consen 272 IYPDARIWLTGHSLGGAIASLLG 294 (425)
T ss_pred hCCCceEEEeccccchHHHHHhc
Confidence 44467899999999997554444
No 232
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=20.11 E-value=2.3e+02 Score=26.87 Aligned_cols=70 Identities=9% Similarity=0.083 Sum_probs=46.4
Q ss_pred eEEEecC--CCCCCCCCCCCCCCccCCchhhHHHHHHHHHHHHHHCcCCCCCCEEEEcccccccccHHHHHHHHHhccCC
Q 044068 161 MLFLESP--AGVGFSYSNTSSDYVMNGDERTAADSYTFLLNWFERFPEYKSRAFFLAGESYAGHYIPQVALTILQFNKNQ 238 (481)
Q Consensus 161 vlyiDqP--vG~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 238 (481)
+|-.+++ +|||-+- ..+.++++..|++ +-+ +.. .+.-|. |||-.-|.=+..+..+.
T Consensus 133 vIAYEPvWAIGtG~~a-----------s~~~~~~v~~~ir-~~~---~~~-~~~~Il---YGGSV~~~N~~~l~~~~--- 190 (205)
T TIGR00419 133 VVAVEPPELIGTGIPV-----------SPAQPEVVHGSVR-AVK---EVN-ESVRVL---CGAGISTGEDAELAAQL--- 190 (205)
T ss_pred EEEECCHHHhCCCCCC-----------CHHHHHHHHHHHH-hhh---hhc-CCceEE---EeCCCCHHHHHHHhcCC---
Confidence 4666643 5777652 1335777778777 211 212 233343 99999999999887654
Q ss_pred ceecceeeeecCcccCc
Q 044068 239 TFINLKGLAMGDAWIDT 255 (481)
Q Consensus 239 ~~inLkGi~IGNg~~dp 255 (481)
++.|+.+|.+.+++
T Consensus 191 ---~iDG~LvG~Asl~a 204 (205)
T TIGR00419 191 ---GAEGVLLASGSLKA 204 (205)
T ss_pred ---CCCEEEEeeeeecC
Confidence 49999999998875
Done!