BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044070
(903 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297739782|emb|CBI29964.3| unnamed protein product [Vitis vinifera]
Length = 1363
Score = 1297 bits (3357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/908 (70%), Positives = 746/908 (82%), Gaps = 36/908 (3%)
Query: 1 MAVSEEVCSTAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVV 60
MAV+EE CS+ KSRS+ ++ S HYLAKCVLKGSVVL V HG +RSP+ +D+V
Sbjct: 1 MAVAEEECSSTKSRSASNNDS---------HYLAKCVLKGSVVLHVVHGRIRSPSFSDIV 51
Query: 61 FGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISD 120
FGKETS+ELVIIGEDGIVQSVCEQAVFGTIKDLAV+ WN++F+ QN Q+ G+DLLVV+SD
Sbjct: 52 FGKETSLELVIIGEDGIVQSVCEQAVFGTIKDLAVLRWNERFHHQNLQMQGRDLLVVVSD 111
Query: 121 SGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFS 180
SGKLSFL FCNEMHRFFPV V LS+PGN R+QLG+MLA+DS+GC IA SAYEDRL +FS
Sbjct: 112 SGKLSFLRFCNEMHRFFPVTHVQLSSPGNLRNQLGQMLAIDSNGCFIATSAYEDRLAMFS 171
Query: 181 LSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPIL 240
+SM++ SDIIDK+I YP E E D+ +R + SISGTIWSMCFIS D QPS +NP+L
Sbjct: 172 ISMATDSDIIDKRIFYPPEIEGDSGVARSVHRTSISGTIWSMCFISKDLNQPSGGYNPVL 231
Query: 241 AIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDA 300
AIILNRRGA+L EL+L+ W I E+A+ V+S + EAG +AH +VEVP SYGFAF+FRIGDA
Sbjct: 232 AIILNRRGAVLTELVLLEWIIIENAVRVISQYAEAGHVAHSIVEVPHSYGFAFLFRIGDA 291
Query: 301 LLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRDY 360
LLMDLRD HNP CVY+TSLN LP ++E QNF +ESCRVHD D++G+FNVAA ALLEL+DY
Sbjct: 292 LLMDLRDAHNPCCVYKTSLNILPTSVE-QNFAEESCRVHDGDEDGIFNVAASALLELKDY 350
Query: 361 -----DPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGH 415
DPM +D DSG K SKHVC+ SWEP +K +M+FCVDTGE FMIEI+F SDG
Sbjct: 351 VAKGDDPMNVDGDSGMVKSTSKHVCALSWEPGNEKNSRMIFCVDTGELFMIEISFDSDGP 410
Query: 416 KVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMS 475
KV+LS+CLY+G CKALLW G FL+A VEMGDGMVLK E GRLVY SPIQNIAPILDMS
Sbjct: 411 KVNLSDCLYRGLSCKALLWFAGGFLAALVEMGDGMVLKLEQGRLVYRSPIQNIAPILDMS 470
Query: 476 VVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPY 535
VVD HDE+ DQMFACCGV PEGSLRIIRSGIS+EKLLRTAPIYQGITGTWTV+MKV D Y
Sbjct: 471 VVDCHDEEHDQMFACCGVTPEGSLRIIRSGISVEKLLRTAPIYQGITGTWTVKMKVIDSY 530
Query: 536 HSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMP 595
HSFLVLSFVEETRVL VGL+FTDVTDSVGF+PDV TLACG+V DGLLVQIH+N V+LC+P
Sbjct: 531 HSFLVLSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGVVDDGLLVQIHKNGVKLCLP 590
Query: 596 TMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYE 655
T VAH GIPL+ P+CTSWFPE++SISLGAV +N+I+V+TS+PCFLFILGVRS+S YE
Sbjct: 591 TTVAHPEGIPLASPICTSWFPENISISLGAVGYNLIVVATSSPCFLFILGVRSVSAYQYE 650
Query: 656 IYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRP 715
IYEMQH+RLQ+E+SCISIP KH +++ S+ +LV NSS AL GV IG FVIGTH+P
Sbjct: 651 IYEMQHVRLQNEVSCISIPHKHFDKKPSTFLSNLVDNSSAAALLIGVNIGRIFVIGTHKP 710
Query: 716 SVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLR 775
SVE+LSF+P EGLR+LASG+I LTNT+GTA+SGC+PQD RLVL D+FYVL+GLRNGMLLR
Sbjct: 711 SVEILSFLPDEGLRILASGAISLTNTLGTAVSGCVPQDARLVLVDRFYVLSGLRNGMLLR 770
Query: 776 FEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGI 835
FE P + + + S ++ + NI S P+NLQLIA RRIGI
Sbjct: 771 FELP-------AASMVFSSELSSHSPSTNINS--------------PVNLQLIAIRRIGI 809
Query: 836 TPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILF 895
TPVFLVPLSDSL+AD+IALSDRPWLLQ+ARHSL+YTSISFQPSTH TPVCS+ECP GILF
Sbjct: 810 TPVFLVPLSDSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECPMGILF 869
Query: 896 VAENSLNL 903
VAENSL+L
Sbjct: 870 VAENSLHL 877
>gi|225441567|ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
Length = 1387
Score = 1296 bits (3355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/908 (70%), Positives = 749/908 (82%), Gaps = 22/908 (2%)
Query: 1 MAVSEEVCSTAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVV 60
MAV+EE CS+ KSRS+ ++ S HYLAKCVLKGSVVL V HG +RSP+ +D+V
Sbjct: 1 MAVAEEECSSTKSRSASNNDS---------HYLAKCVLKGSVVLHVVHGRIRSPSFSDIV 51
Query: 61 FGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISD 120
FGKETS+ELVIIGEDGIVQSVCEQAVFGTIKDLAV+ WN++F+ QN Q+ G+DLLVV+SD
Sbjct: 52 FGKETSLELVIIGEDGIVQSVCEQAVFGTIKDLAVLRWNERFHHQNLQMQGRDLLVVVSD 111
Query: 121 SGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFS 180
SGKLSFL FCNEMHRFFPV V LS+PGN R+QLG+MLA+DS+GC IA SAYEDRL +FS
Sbjct: 112 SGKLSFLRFCNEMHRFFPVTHVQLSSPGNLRNQLGQMLAIDSNGCFIATSAYEDRLAMFS 171
Query: 181 LSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPIL 240
+SM++ SDIIDK+I YP E E D+ +R + SISGTIWSMCFIS D QPS +NP+L
Sbjct: 172 ISMATDSDIIDKRIFYPPEIEGDSGVARSVHRTSISGTIWSMCFISKDLNQPSGGYNPVL 231
Query: 241 AIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDA 300
AIILNRRGA+L EL+L+ W I E+A+ V+S + EAG +AH +VEVP SYGFAF+FRIGDA
Sbjct: 232 AIILNRRGAVLTELVLLEWIIIENAVRVISQYAEAGHVAHSIVEVPHSYGFAFLFRIGDA 291
Query: 301 LLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRDY 360
LLMDLRD HNP CVY+TSLN LP ++E QNF +ESCRVHD D++G+FNVAA ALLEL+DY
Sbjct: 292 LLMDLRDAHNPCCVYKTSLNILPTSVE-QNFAEESCRVHDGDEDGIFNVAASALLELKDY 350
Query: 361 -----DPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGH 415
DPM +D DSG K SKHVC+ SWEP +K +M+FCVDTGE FMIEI+F SDG
Sbjct: 351 VAKGDDPMNVDGDSGMVKSTSKHVCALSWEPGNEKNSRMIFCVDTGELFMIEISFDSDGP 410
Query: 416 KVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMS 475
KV+LS+CLY+G CKALLW G FL+A VEMGDGMVLK E GRLVY SPIQNIAPILDMS
Sbjct: 411 KVNLSDCLYRGLSCKALLWFAGGFLAALVEMGDGMVLKLEQGRLVYRSPIQNIAPILDMS 470
Query: 476 VVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPY 535
VVD HDE+ DQMFACCGV PEGSLRIIRSGIS+EKLLRTAPIYQGITGTWTV+MKV D Y
Sbjct: 471 VVDCHDEEHDQMFACCGVTPEGSLRIIRSGISVEKLLRTAPIYQGITGTWTVKMKVIDSY 530
Query: 536 HSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMP 595
HSFLVLSFVEETRVL VGL+FTDVTDSVGF+PDV TLACG+V DGLLVQIH+N V+LC+P
Sbjct: 531 HSFLVLSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGVVDDGLLVQIHKNGVKLCLP 590
Query: 596 TMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYE 655
T VAH GIPL+ P+CTSWFPE++SISLGAV +N+I+V+TS+PCFLFILGVRS+S YE
Sbjct: 591 TTVAHPEGIPLASPICTSWFPENISISLGAVGYNLIVVATSSPCFLFILGVRSVSAYQYE 650
Query: 656 IYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRP 715
IYEMQH+RLQ+E+SCISIP KH +++ S+ +LV NSS AL GV IG FVIGTH+P
Sbjct: 651 IYEMQHVRLQNEVSCISIPHKHFDKKPSTFLSNLVDNSSAAALLIGVNIGRIFVIGTHKP 710
Query: 716 SVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLR 775
SVE+LSF+P EGLR+LASG+I LTNT+GTA+SGC+PQD RLVL D+FYVL+GLRNGMLLR
Sbjct: 711 SVEILSFLPDEGLRILASGAISLTNTLGTAVSGCVPQDARLVLVDRFYVLSGLRNGMLLR 770
Query: 776 FEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGI 835
FE P S + SS HSP ++ + A ++ P+NLQLIA RRIGI
Sbjct: 771 FELPAASMVFSSELSSHSPSVSSCSVND-------ADTNLSKNINSPVNLQLIAIRRIGI 823
Query: 836 TPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILF 895
TPVFLVPLSDSL+AD+IALSDRPWLLQ+ARHSL+YTSISFQPSTH TPVCS+ECP GILF
Sbjct: 824 TPVFLVPLSDSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECPMGILF 883
Query: 896 VAENSLNL 903
VAENSL+L
Sbjct: 884 VAENSLHL 891
>gi|147860990|emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]
Length = 1298
Score = 1263 bits (3267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/962 (66%), Positives = 748/962 (77%), Gaps = 69/962 (7%)
Query: 1 MAVSEEVCSTAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVV 60
MAV+EE C + KSRS+ S++ P H+LAKCVLKGSVVL V HG +RSP+ +D+V
Sbjct: 1 MAVAEEECXSTKSRSA--SNNDP-------HHLAKCVLKGSVVLHVVHGRIRSPSFSDIV 51
Query: 61 FGK-----------------------------------------ETSIELVIIGEDGIVQ 79
FGK ETS+ELVIIGEDGIVQ
Sbjct: 52 FGKCQNNGAFCFKCLYFHVAARESLALAWVLWWEEAEAFWSIWKETSLELVIIGEDGIVQ 111
Query: 80 SVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPV 139
SVCEQAVFGTIKDLAV+ WN++F+ QN Q+ G+DLLVV+SDSGKLSFL FCNEMHRFFPV
Sbjct: 112 SVCEQAVFGTIKDLAVLRWNERFHHQNLQMQGRDLLVVVSDSGKLSFLRFCNEMHRFFPV 171
Query: 140 AQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSE 199
V LS+PGN R+QLG+MLA+DS+GC IA SAYEDRL +FS+SM++ SDIIDK+I YP E
Sbjct: 172 THVQLSSPGNLRNQLGQMLAIDSNGCFIATSAYEDRLAMFSISMATDSDIIDKRIFYPPE 231
Query: 200 SEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGW 259
E D+ +R + SISGTIWSMCFIS D QPS +NP+LAIILNRRGA+L EL+L+ W
Sbjct: 232 IEGDSGVARSVHRTSISGTIWSMCFISKDLNQPSGGYNPVLAIILNRRGAVLTELVLLEW 291
Query: 260 NIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSL 319
I E+A+ V+S + EAG AH +VEVP SYGFAF+FRIGDALLMDLRD HNP CVY+TSL
Sbjct: 292 IIIENAVRVISQYAEAGHXAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYKTSL 351
Query: 320 NFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRDY-----DPMCIDSDSGNAKE 374
N LP ++E QNF +ESCRVHD D++G+FNVAA ALLEL+DY DPM +D DSG K
Sbjct: 352 NILPTSVE-QNFAEESCRVHDGDEDGIFNVAASALLELKDYVAKGDDPMNVDGDSGMVKS 410
Query: 375 PSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLW 434
SKHVC+ SWEP +K +M+FCVDTGE FMIE +F SDG KV+LS+CLY+G CKALLW
Sbjct: 411 TSKHVCAXSWEPGNEKNSRMIFCVDTGELFMIEXSFDSDGPKVNLSDCLYRGLSCKALLW 470
Query: 435 VEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVA 494
G FL+A VEMGDGMVLK E GRLVY SPIQNIAPILDMSVVD HDE+ DQMFACCGV
Sbjct: 471 FAGGFLAALVEMGDGMVLKLEQGRLVYRSPIQNIAPILDMSVVDCHDEEHDQMFACCGVT 530
Query: 495 PEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGL 554
PEGSLRIIRSGIS+EKLLRTAPIYQGITGTWTV+MKV D YHSFLVLSFVEETRVL VGL
Sbjct: 531 PEGSLRIIRSGISVEKLLRTAPIYQGITGTWTVKMKVIDSYHSFLVLSFVEETRVLSVGL 590
Query: 555 NFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW 614
+FTDVTDSVGF+PDV TLACG+V DGLLVQIH+N V+LC+PT VAH GIPL+ P+CTSW
Sbjct: 591 SFTDVTDSVGFQPDVSTLACGVVDDGLLVQIHKNGVKLCLPTTVAHPEGIPLASPICTSW 650
Query: 615 FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIP 674
FPE++SISLGAV +N+I+V+TS+PCFLFILGVRS+S YEIYEMQH+RLQ+E+SCISIP
Sbjct: 651 FPENISISLGAVGYNLIVVATSSPCFLFILGVRSVSAYQYEIYEMQHVRLQNEVSCISIP 710
Query: 675 QKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG 734
KH +++ S+ +LV NSS AL GV IG FVIGTH+PSVE+LSF+P EGLR+LASG
Sbjct: 711 HKHFDKKPSTFLSNLVDNSSAAALLIGVNIGRIFVIGTHKPSVEILSFLPDEGLRILASG 770
Query: 735 SIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNI------PSSV 788
+I LTNT+GTA+SGC+PQD RLVL D+FYVL+GLRNGMLLRFE P S + S
Sbjct: 771 AISLTNTLGTAVSGCVPQDARLVLVDRFYVLSGLRNGMLLRFELPAASMVFSSELSSHSP 830
Query: 789 APIHSPISATFRNTENIRS-------GIAATSSFESKDELPINLQLIATRRIGITPVFLV 841
+ ++ N N+ + A S E+ P+NLQLIA RRIGITPVFLV
Sbjct: 831 SVSSCSVNDADTNLSNMMAPNSIGPQMCAINLSEETNINSPVNLQLIAIRRIGITPVFLV 890
Query: 842 PLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSL 901
PLSDSL+AD+IALSDRPWLLQ+ARHSL+YTSISFQPSTH TPVCS+ECP GILFVAENSL
Sbjct: 891 PLSDSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECPMGILFVAENSL 950
Query: 902 NL 903
+L
Sbjct: 951 HL 952
>gi|449437538|ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
Length = 1376
Score = 1262 bits (3265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/904 (68%), Positives = 737/904 (81%), Gaps = 11/904 (1%)
Query: 1 MAVSEEVCSTAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVV 60
MAVSEE CS+AKSRSS S+SS+ +YLAKCVL+GSVVLQV +GH+RSP+S DVV
Sbjct: 1 MAVSEEECSSAKSRSSSSTSSS-------TYYLAKCVLRGSVVLQVLYGHIRSPSSLDVV 53
Query: 61 FGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISD 120
FGKETSIELV+IGEDG+VQSVCEQAVFGTIKD+A++PWN++F +Q++GKDLL+VISD
Sbjct: 54 FGKETSIELVVIGEDGVVQSVCEQAVFGTIKDMAILPWNERFRPSYTQMLGKDLLIVISD 113
Query: 121 SGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFS 180
SGKLSFL FCN+MHRF P+ + LSNPGNSR+Q+GRMLA DSSGC IA SAYE+RL LFS
Sbjct: 114 SGKLSFLTFCNKMHRFLPMTHIQLSNPGNSRNQIGRMLASDSSGCFIAASAYENRLALFS 173
Query: 181 LSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPIL 240
S+S+GSDI+DK+I YP +SE D+ A R QK SI GTIWSMCFIS D ++++NPIL
Sbjct: 174 TSISAGSDIVDKRITYPPDSEGDSVAPRSMQKASICGTIWSMCFISKDRGHLTQDNNPIL 233
Query: 241 AIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDA 300
A++LNRRGA+LNELLL+GWNIRE I V+ F E GPLA+ VVEVP+SYGFA +FR+GDA
Sbjct: 234 AVLLNRRGAILNELLLLGWNIREQTIHVICQFLEDGPLAYEVVEVPQSYGFALLFRVGDA 293
Query: 301 LLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRDY 360
LLMDLRD H+P CVYR L+F PP +E QNF++ES RV D DDEGLFNVAACALLELRDY
Sbjct: 294 LLMDLRDVHSPCCVYRIGLHF-PPNVE-QNFIEESYRVQDADDEGLFNVAACALLELRDY 351
Query: 361 DPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLS 420
DPMCIDSD G+ HVCSWSWEP ++ +M+FC+DTG+ FMIE+ F SDG KV+ S
Sbjct: 352 DPMCIDSDDGSLNTNQNHVCSWSWEPGNNRNRRMIFCMDTGDLFMIEMNFDSDGLKVNQS 411
Query: 421 ECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYH 480
CLYKG P KALLWVEG +L+A VEMGDGMVLK ENGRL+Y +PIQNIAPILDMSVVD H
Sbjct: 412 ACLYKGQPYKALLWVEGGYLAALVEMGDGMVLKLENGRLIYANPIQNIAPILDMSVVDKH 471
Query: 481 DEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLV 540
DEK+DQMFACCG+APEGSLRIIR+GIS+E LLRT+PIYQGIT WT++MK SD YHS+LV
Sbjct: 472 DEKQDQMFACCGMAPEGSLRIIRNGISVENLLRTSPIYQGITSIWTIKMKRSDTYHSYLV 531
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
LSFVEETRVL VGL+F DVTDSVGF+ D CTLACGL+ DGL++QIHQNAVRLC+PT +AH
Sbjct: 532 LSFVEETRVLSVGLSFIDVTDSVGFQSDTCTLACGLLDDGLVIQIHQNAVRLCLPTKIAH 591
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQ 660
S GI LS P CTSWFP+++ ISLGAV HN+I+VSTSNPCFLFILGVR +S YEIYE Q
Sbjct: 592 SEGIELSSPACTSWFPDNIGISLGAVGHNVIVVSTSNPCFLFILGVRKVSGYDYEIYEKQ 651
Query: 661 HMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVL 720
++RLQ ELSCISIP+KH +++S+ P++ V NS + L V VIGTHRPSVE+L
Sbjct: 652 YLRLQYELSCISIPEKHFAKKESNFPMNSVENSIMSTLLNEVSCDTIIVIGTHRPSVEIL 711
Query: 721 SFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPP 780
SFVP GL VLASG+I L N +G A+SGCIPQDVRLVL D+FYVL GLRNGMLLRFEWP
Sbjct: 712 SFVPSIGLTVLASGTISLMNILGNAVSGCIPQDVRLVLVDRFYVLTGLRNGMLLRFEWPH 771
Query: 781 DSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFES-KDELPINLQLIATRRIGITPVF 839
+ + SS P H+ + +++ E +DE+P LQLIA RRIGITPVF
Sbjct: 772 TATMNSSDMP-HTVVPFLLSCSDSFSKEFHNADILEKHEDEIPSCLQLIAIRRIGITPVF 830
Query: 840 LVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAEN 899
LVPL+D LD+D+IALSDRPWLL +ARHSL+YTSISFQPSTH TPVCS +CP G+LFVAE+
Sbjct: 831 LVPLTDRLDSDIIALSDRPWLLHSARHSLSYTSISFQPSTHVTPVCSADCPSGLLFVAES 890
Query: 900 SLNL 903
SL+L
Sbjct: 891 SLHL 894
>gi|449526686|ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
sativus]
Length = 997
Score = 1259 bits (3257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/904 (68%), Positives = 737/904 (81%), Gaps = 11/904 (1%)
Query: 1 MAVSEEVCSTAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVV 60
MAVSEE CS+AKSRSS S+SS+ +YLAKCVL+GSVVLQV +GH+RSP+S DVV
Sbjct: 1 MAVSEEECSSAKSRSSSSTSSST-------YYLAKCVLRGSVVLQVLYGHIRSPSSLDVV 53
Query: 61 FGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISD 120
FGKETSIELV+IGEDG+VQSVCEQAVFGTIKD+A++PWN++F +Q++GKDLL+VISD
Sbjct: 54 FGKETSIELVVIGEDGVVQSVCEQAVFGTIKDMAILPWNERFRPSYTQMLGKDLLIVISD 113
Query: 121 SGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFS 180
SGKLSFL FCN+MHRF P+ + LSNPGNSR+Q+GRMLA DSSGC IA SAYE+RL LFS
Sbjct: 114 SGKLSFLTFCNKMHRFLPMTHIQLSNPGNSRNQIGRMLASDSSGCFIAASAYENRLALFS 173
Query: 181 LSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPIL 240
S+S+GSDI+DK+I YP +SE D+ A R QK SI GTIWSMCFIS D ++++NPIL
Sbjct: 174 TSISAGSDIVDKRITYPPDSEGDSVAPRSMQKASICGTIWSMCFISKDRGHLTQDNNPIL 233
Query: 241 AIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDA 300
A++LNRRGA+LNELLL+GWNIRE I V+ F E GPLA+ VVEVP+SYGFA +FR+GDA
Sbjct: 234 AVLLNRRGAILNELLLLGWNIREQTIHVICQFLEDGPLAYEVVEVPQSYGFALLFRVGDA 293
Query: 301 LLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRDY 360
LLMDLRD H+P CVYR L+F PP +E QNF++ES RV D DDEGLFNVAACALLELRDY
Sbjct: 294 LLMDLRDVHSPCCVYRIGLHF-PPNVE-QNFIEESYRVQDADDEGLFNVAACALLELRDY 351
Query: 361 DPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLS 420
DPMCIDSD G+ HVCSWSWEP ++ +M+FC+DTG+ FMIE+ F SDG KV+ S
Sbjct: 352 DPMCIDSDDGSLNTNQNHVCSWSWEPGNNRNRRMIFCMDTGDLFMIEMNFDSDGLKVNQS 411
Query: 421 ECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYH 480
CLYKG P KALLWVEG +L+A VEMGDGMVLK ENGRL+Y +PIQNIAPILDMSVVD H
Sbjct: 412 ACLYKGQPYKALLWVEGGYLAALVEMGDGMVLKLENGRLIYANPIQNIAPILDMSVVDKH 471
Query: 481 DEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLV 540
DEK+DQMFACCG+APEGSLRIIR+GIS+E LLRT+PIYQGIT WT++MK SD YHS+LV
Sbjct: 472 DEKQDQMFACCGMAPEGSLRIIRNGISVENLLRTSPIYQGITSIWTIKMKRSDTYHSYLV 531
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
LSFVEETRVL VGL+F DVTDSVGF+ D CTLACGL+ DGL++QIHQNAVRLC+PT +AH
Sbjct: 532 LSFVEETRVLSVGLSFIDVTDSVGFQSDTCTLACGLLDDGLVIQIHQNAVRLCLPTKIAH 591
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQ 660
S GI LS P CTSWFP+++ ISLGAV HN+I+VSTSNPCFLFILGVR +S YEIYE Q
Sbjct: 592 SEGIELSSPACTSWFPDNIGISLGAVGHNVIVVSTSNPCFLFILGVRKVSGYDYEIYEKQ 651
Query: 661 HMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVL 720
++RLQ ELSCISIP+KH +++S+ P++ V NS + L V VIGTHRPSVE+L
Sbjct: 652 YLRLQYELSCISIPEKHFAKKESNFPMNSVENSIMSTLLNEVSCDTIIVIGTHRPSVEIL 711
Query: 721 SFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPP 780
SFVP GL VLASG+I L N +G A+SGCIPQDVRLVL D+FYVL GLRNGMLLRFEWP
Sbjct: 712 SFVPSIGLTVLASGTISLMNILGNAVSGCIPQDVRLVLVDRFYVLTGLRNGMLLRFEWPH 771
Query: 781 DSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFES-KDELPINLQLIATRRIGITPVF 839
+ + SS P H+ + +++ E +DE+P LQLIA RRIGITPVF
Sbjct: 772 TATMNSSDMP-HTVVPFLLSCSDSFSKEFHNADILEKHEDEIPSCLQLIAIRRIGITPVF 830
Query: 840 LVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAEN 899
LVPL+D LD+D+IALSDRPWLL +ARHSL+YTSISFQPSTH TPVCS +CP G+LFVAE+
Sbjct: 831 LVPLTDRLDSDIIALSDRPWLLHSARHSLSYTSISFQPSTHVTPVCSADCPSGLLFVAES 890
Query: 900 SLNL 903
SL+L
Sbjct: 891 SLHL 894
>gi|358348136|ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
gi|355504040|gb|AES85243.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
Length = 1370
Score = 1201 bits (3106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/905 (66%), Positives = 727/905 (80%), Gaps = 20/905 (2%)
Query: 1 MAVSEEVCSTAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVV 60
MAVSE+ CS+AKS S SSSS +YL+KCV++ S +LQV + HLRSP+SNDVV
Sbjct: 1 MAVSEQECSSAKSSPSSSSSSTSR------YYLSKCVVRASAILQVLYAHLRSPSSNDVV 54
Query: 61 FGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISD 120
FGKETSIELV+I E+G VQ+VC+Q VFG IKDLAV+PWN KF + Q GKDLLV +SD
Sbjct: 55 FGKETSIELVVIDEEGNVQTVCDQPVFGIIKDLAVLPWNDKFCTRRPQTQGKDLLVALSD 114
Query: 121 SGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFS 180
SGKLS L FCNEM+RFFP+ V LSNPGN R GRMLAVDSSGC IA SAYEDRL LFS
Sbjct: 115 SGKLSLLTFCNEMNRFFPITHVQLSNPGNIRDLPGRMLAVDSSGCFIAASAYEDRLALFS 174
Query: 181 LSMS-SGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPI 239
+S S +GSDIID++I YPSESE S SR QK SISGTIWSMCFIS D RQP K NP+
Sbjct: 175 MSTSMTGSDIIDERIIYPSESEETASTSRTMQKTSISGTIWSMCFISVDSRQPIKGQNPV 234
Query: 240 LAIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGD 299
LAIILNRRGALLNELLL+ WN++ H +SV+S + EAGPLAH +VEVP S G AF+FR GD
Sbjct: 235 LAIILNRRGALLNELLLLEWNVKAHIVSVISQYVEAGPLAHNIVEVPNSPGLAFLFRAGD 294
Query: 300 ALLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRD 359
LLMDLRDPHNP CVY+T LN LP A+EEQ +VD+SC++HD+DDEG F+VAACALL+L D
Sbjct: 295 VLLMDLRDPHNPLCVYKTCLNILPNAIEEQTYVDDSCKLHDLDDEG-FSVAACALLQLSD 353
Query: 360 YDPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHL 419
YDPMCIDSDSG K++CSWSWEPE ++P+M+FCVDTGEFFMIE+ F SDG K+ L
Sbjct: 354 YDPMCIDSDSGGTNSGPKYICSWSWEPENYEVPRMIFCVDTGEFFMIEVYFDSDGPKLSL 413
Query: 420 SECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY 479
SECLYKG PCK LLWV+ +L++ VEMGD +VLK ++GRL +T+ IQNIAPI D++ DY
Sbjct: 414 SECLYKGLPCKELLWVKEGYLASIVEMGDSVVLKLKDGRLCFTNLIQNIAPIFDVTSGDY 473
Query: 480 HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFL 539
HDEK DQMFACCGV PEGSLR+I+SGI++EKLLRT Y+G+ GTWTVRMK+SD YHSFL
Sbjct: 474 HDEKHDQMFACCGVTPEGSLRVIQSGINVEKLLRTPSTYEGVAGTWTVRMKISDQYHSFL 533
Query: 540 VLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVA 599
VLSF+ ETR+L VGL+FTDVTDSVGF+P+VCTLACGLV+DGLLVQI+Q+AV+LC+PT
Sbjct: 534 VLSFLGETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLVQIYQSAVKLCLPTKDG 593
Query: 600 HSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEM 659
HS GIPLS P+CTSW+P++++ISLGAV HN I+VSTSNPCFLFILGVR LS YEIYEM
Sbjct: 594 HSEGIPLSSPICTSWYPDNLNISLGAVGHNFIVVSTSNPCFLFILGVRMLSAYQYEIYEM 653
Query: 660 QHMRLQSELSCISIPQ-KHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVE 718
QH+ LQ+E+SCISIP+ K+ ++R +SS +NSS+ + +GV I TFVIGTHRPSVE
Sbjct: 654 QHLELQNEVSCISIPRTKYGKKRSNSS--ISENNSSMASTVSGVDINKTFVIGTHRPSVE 711
Query: 719 VLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEW 778
+ SF P G+ V+A G+I L +T GTA S CIPQDVRLV D++YVLAGLRNGMLLRFEW
Sbjct: 712 IWSFDPNGGVTVVACGTISLKSTAGTAKSFCIPQDVRLVFVDKYYVLAGLRNGMLLRFEW 771
Query: 779 PPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPV 838
P + + SS+ + + +S+ + +++ LP LQLIA RRIGITPV
Sbjct: 772 PTEPSHSSSINVVDTALSSI---------NLVNSTTMAINVNLPCMLQLIAIRRIGITPV 822
Query: 839 FLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAE 898
FLVPL D+LDAD+IALSDRPWLL +ARHS++YTSISFQPS+HATPVCS++CPKGILFVAE
Sbjct: 823 FLVPLDDTLDADIIALSDRPWLLHSARHSISYTSISFQPSSHATPVCSIDCPKGILFVAE 882
Query: 899 NSLNL 903
NSL+L
Sbjct: 883 NSLHL 887
>gi|42564075|ref|NP_187802.2| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
gi|29824376|gb|AAP04148.1| unknown protein [Arabidopsis thaliana]
gi|110739103|dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana]
gi|332641608|gb|AEE75129.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
Length = 1379
Score = 1151 bits (2977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/881 (65%), Positives = 688/881 (78%), Gaps = 31/881 (3%)
Query: 31 HYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
HYLAKC+L+ SVVLQVA+G+ RSP+S D+VFGKET IELV+IGEDGIV+SVCEQ VFGTI
Sbjct: 35 HYLAKCILRPSVVLQVAYGYFRSPSSRDIVFGKETCIELVVIGEDGIVESVCEQYVFGTI 94
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
KDLAV+P + K + NS MGKDLL V+SDSGKLSFL+F NEMHRF P+ V LS PGNS
Sbjct: 95 KDLAVIPQSSKLYS-NSLQMGKDLLAVLSDSGKLSFLSFSNEMHRFSPIQHVQLSTPGNS 153
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIA 210
R QLGRML +DSSG +AVSAY DR LFSLS SS DII ++I YPSE + S+ +
Sbjct: 154 RIQLGRMLTIDSSGLFLAVSAYHDRFALFSLSTSSMGDIIHQRISYPSEDGGNGSSIQ-- 211
Query: 211 QKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISVLS 270
+ISGTIWSMCFIS D + SKE+ PILAI++NR+G+L+NEL L WN++E +I ++S
Sbjct: 212 ---AISGTIWSMCFISKDFNE-SKEYAPILAIVINRKGSLMNELALFRWNVKEESICLIS 267
Query: 271 CFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPPALEEQN 330
+ E G LAH +VEVP S GFAF+FRIGD LLMDLRDP NP C++RTSL+F+P +L E++
Sbjct: 268 EYVETGALAHSIVEVPHSSGFAFLFRIGDVLLMDLRDPQNPCCLFRTSLDFVPASLMEEH 327
Query: 331 FVDESCRVHDVDDEGLFNVAACALLELRDY-----DPMCIDSDSGNAKEPSKHVCSWSWE 385
FV+ESCRV D DDEG NV CALLELRD+ DPM ID++S K SK+V SW+WE
Sbjct: 328 FVEESCRVQDGDDEGC-NVVVCALLELRDHEVRDHDPMFIDTESDIGKLSSKNVSSWTWE 386
Query: 386 PETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVE 445
PE + P+M+ C+D G+FFM E+ + DG KV+LSECLYKG PCK +LW+EG FL+ F E
Sbjct: 387 PENNHNPRMIICLDNGDFFMFELIYEDDGVKVNLSECLYKGLPCKDILWIEGGFLATFAE 446
Query: 446 MGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSG 505
M DG V K +L + S IQNIAPILD SV+D +EKRDQ+FACCGV PEGSLRIIRSG
Sbjct: 447 MADGTVFKLGTEKLHWMSSIQNIAPILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSG 506
Query: 506 ISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGF 565
I++EKLL+TAP+YQGITGTWTV+MK++D YHSFLVLSFVEETRVL VGL+F DVTDSVGF
Sbjct: 507 INVEKLLKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETRVLSVGLSFKDVTDSVGF 566
Query: 566 RPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGA 625
+ DVCT ACGLVADGLLVQIHQ+A+RLCMPTM AHS GIP+S P +SWFPE+VSISLGA
Sbjct: 567 QSDVCTFACGLVADGLLVQIHQDAIRLCMPTMDAHSDGIPVSSPFFSSWFPENVSISLGA 626
Query: 626 VAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKH--PERRKS 683
V N+I+VSTSNPCFL ILGV+S+S EIYE+Q + LQ E+SCIS+PQKH +R +
Sbjct: 627 VGQNLIVVSTSNPCFLSILGVKSVSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSRD 686
Query: 684 SSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKE-GLRVLASGSIVLTNTM 742
SSP N A+P+ + GYTF+IGTH+PSVEVLSF G+RVLASG + LTNTM
Sbjct: 687 SSP----DNFCKAAIPSAMEQGYTFLIGTHKPSVEVLSFTEDGVGVRVLASGLVSLTNTM 742
Query: 743 GTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNT 802
GT ISGCIPQDVRLVL DQ YVL+GLRNGMLLRFEW P SN P + F +
Sbjct: 743 GTVISGCIPQDVRLVLVDQLYVLSGLRNGMLLRFEWAPFSNSSGLNCPDY------FSHC 796
Query: 803 ENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQ 862
+ + KD LP+NL LIATRRIGITPVFLVP SDSLD+D+IALSDRPWLLQ
Sbjct: 797 KEEMDTVVG-----KKDNLPVNLLLIATRRIGITPVFLVPFSDSLDSDIIALSDRPWLLQ 851
Query: 863 TARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
TAR SL+YTSISFQPSTHATPVCS ECP+GILFV+EN L+L
Sbjct: 852 TARQSLSYTSISFQPSTHATPVCSFECPQGILFVSENCLHL 892
>gi|297829750|ref|XP_002882757.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328597|gb|EFH59016.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1384
Score = 1150 bits (2975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/878 (66%), Positives = 693/878 (78%), Gaps = 28/878 (3%)
Query: 31 HYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
HYLAKC+L+ SVVLQVA+G+ RS +S D+VFGKET IELV+IGEDGIV+SVCEQ VFGTI
Sbjct: 35 HYLAKCILRPSVVLQVAYGYFRSLSSRDIVFGKETCIELVVIGEDGIVESVCEQYVFGTI 94
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
KDLAV+P + K + NS MGKDLL V+SDSG LSFL+F NEMHRF P+ V LS PGNS
Sbjct: 95 KDLAVIPQSSKLYS-NSLQMGKDLLAVLSDSGNLSFLSFSNEMHRFSPIQHVQLSTPGNS 153
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIA 210
R QLGRML +DSSG +AVSAY DR LFSLS SS DII ++I YPSE + S+ +
Sbjct: 154 RIQLGRMLTIDSSGLFLAVSAYHDRFALFSLSTSSMGDIIHERISYPSEDGGNGSSVQ-- 211
Query: 211 QKNSISGTIWSMCFISTD-PRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISVL 269
+ISGTIWSMCFIS D SKE+ P+ AI++NR G+L+NEL L WN++E ++ ++
Sbjct: 212 ---AISGTIWSMCFISKDFNDSESKEYAPVFAIVINRIGSLMNELALFRWNVKEESMCLI 268
Query: 270 SCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPPALEEQ 329
S + EAG LAH +VEVP S GFAF+FRIGDALLMDLRDP NP C++RTSL+ +P +L E+
Sbjct: 269 SEYVEAGALAHSIVEVPHSSGFAFLFRIGDALLMDLRDPQNPCCLFRTSLDLVPASLVEE 328
Query: 330 NFVDESCRVHDVDDEGLFNVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSWSWEPETD 389
+FV+ESCRV D DDEG FNVAACALLEL D+DPM ID++S K SKHV SW+WEPE +
Sbjct: 329 HFVEESCRVQDGDDEG-FNVAACALLELSDHDPMFIDTESDIGKLSSKHVSSWTWEPENN 387
Query: 390 KIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDG 449
P+M+ C+D GEF+M E+ + DG KV+LSECLYKG PCK +LWVEG FL+ F EM DG
Sbjct: 388 HNPRMIICLDDGEFYMFELIYEDDGVKVNLSECLYKGLPCKEILWVEGGFLATFAEMADG 447
Query: 450 MVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLE 509
V K + +L + S IQNIAPILD SV+D +EKRDQ+FACCGV EGSLRIIRSGI++E
Sbjct: 448 TVFKLGSEKLHWMSSIQNIAPILDFSVMDDQNEKRDQIFACCGVTREGSLRIIRSGINVE 507
Query: 510 KLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
KLL+TAP+YQGITGTWTV+MK++D YHSFLVLSFVEETRVL VGL+F DVTDSVGF+ DV
Sbjct: 508 KLLKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETRVLSVGLSFKDVTDSVGFQSDV 567
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHN 629
CTLACGLVADGLLVQIHQ+A+RLCMPTM AHS GIP+S P +SWFP++VSISLGAV N
Sbjct: 568 CTLACGLVADGLLVQIHQDAIRLCMPTMDAHSDGIPVSSPFFSSWFPDNVSISLGAVGQN 627
Query: 630 MIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKS--SSPI 687
+I+VSTSNPCFL ILGV+S+S EIYE+Q + LQ E+SCIS+PQKH +++S SSP
Sbjct: 628 LIVVSTSNPCFLSILGVKSVSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSCASSP- 686
Query: 688 SLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKE-GLRVLASGSIVLTNTMGTAI 746
NS A+P+G+ GY+F+IGTH+PSVEVLSF G+RVLASG + LTNTMG I
Sbjct: 687 ---DNSCKAAIPSGMEQGYSFLIGTHKPSVEVLSFSEDGVGVRVLASGLVSLTNTMGAVI 743
Query: 747 SGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTE-NI 805
SGCIPQDVRLVL DQ YVL+GLRNGMLLRFEWP SN + ++ P ++ E +I
Sbjct: 744 SGCIPQDVRLVLVDQLYVLSGLRNGMLLRFEWPLFSN----ASGLNCPDYFSYCKEEMDI 799
Query: 806 RSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTAR 865
G KD LPINL LIATRRIGITPVFLVP SDSLD+D+IALSDRPWLLQTAR
Sbjct: 800 VVG--------KKDNLPINLLLIATRRIGITPVFLVPFSDSLDSDIIALSDRPWLLQTAR 851
Query: 866 HSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
SL+YTSISFQPSTHATPVCS ECP+GILFV+EN L+L
Sbjct: 852 QSLSYTSISFQPSTHATPVCSSECPQGILFVSENCLHL 889
>gi|358348118|ref|XP_003638096.1| DNA damage-binding protein, partial [Medicago truncatula]
gi|355504031|gb|AES85234.1| DNA damage-binding protein, partial [Medicago truncatula]
Length = 822
Score = 1084 bits (2803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/840 (65%), Positives = 664/840 (79%), Gaps = 20/840 (2%)
Query: 1 MAVSEEVCSTAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVV 60
MAVSE+ CS+AKS S SSSS +YL+KCV++ S +LQV + HLRSP+SNDVV
Sbjct: 1 MAVSEQECSSAKSSPSSSSSSTSR------YYLSKCVVRASAILQVLYAHLRSPSSNDVV 54
Query: 61 FGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISD 120
FGKETSIELV+I E+G VQ+VC+Q VFG IKDLAV+PWN KF + Q GKDLLV +SD
Sbjct: 55 FGKETSIELVVIDEEGNVQTVCDQPVFGIIKDLAVLPWNDKFCTRRPQTQGKDLLVALSD 114
Query: 121 SGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFS 180
SGKLS L FCNEM+RFFP+ V LSNPGN R GRMLAVDSSGC IA SAYEDRL LFS
Sbjct: 115 SGKLSLLTFCNEMNRFFPITHVQLSNPGNIRDLPGRMLAVDSSGCFIAASAYEDRLALFS 174
Query: 181 LSMS-SGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPI 239
+S S +GSDIID++I YPSESE S SR QK SISGTIWSMCFIS D RQP K NP+
Sbjct: 175 MSTSMTGSDIIDERIIYPSESEETASTSRTMQKTSISGTIWSMCFISVDSRQPIKGQNPV 234
Query: 240 LAIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGD 299
LAIILNRRGALLNELLL+ WN++ H +SV+S + EAGPLAH +VEVP S G AF+FR GD
Sbjct: 235 LAIILNRRGALLNELLLLEWNVKAHIVSVISQYVEAGPLAHNIVEVPNSPGLAFLFRAGD 294
Query: 300 ALLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRD 359
LLMDLRDPHNP CVY+T LN LP A+EEQ +VD+SC++HD+DDEG F+VAACALL+L D
Sbjct: 295 VLLMDLRDPHNPLCVYKTCLNILPNAIEEQTYVDDSCKLHDLDDEG-FSVAACALLQLSD 353
Query: 360 YDPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHL 419
YDPMCIDSDSG K++CSWSWEPE ++P+M+FCVDTGEFFMIE+ F SDG K+ L
Sbjct: 354 YDPMCIDSDSGGTNSGPKYICSWSWEPENYEVPRMIFCVDTGEFFMIEVYFDSDGPKLSL 413
Query: 420 SECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY 479
SECLYKG PCK LLWV+ +L++ VEMGD +VLK ++GRL +T+ IQNIAPI D++ DY
Sbjct: 414 SECLYKGLPCKELLWVKEGYLASIVEMGDSVVLKLKDGRLCFTNLIQNIAPIFDVTSGDY 473
Query: 480 HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFL 539
HDEK DQMFACCGV PEGSLR+I+SGI++EKLLRT Y+G+ GTWTVRMK+SD YHSFL
Sbjct: 474 HDEKHDQMFACCGVTPEGSLRVIQSGINVEKLLRTPSTYEGVAGTWTVRMKISDQYHSFL 533
Query: 540 VLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVA 599
VLSF+ ETR+L VGL+FTDVTDSVGF+P+VCTLACGLV+DGLLVQI+Q+AV+LC+PT
Sbjct: 534 VLSFLGETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLVQIYQSAVKLCLPTKDG 593
Query: 600 HSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEM 659
HS GIPLS P+CTSW+P++++ISLGAV HN I+VSTSNPCFLFILGVR LS YEIYEM
Sbjct: 594 HSEGIPLSSPICTSWYPDNLNISLGAVGHNFIVVSTSNPCFLFILGVRMLSAYQYEIYEM 653
Query: 660 QHMRLQSELSCISIPQ-KHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVE 718
QH+ LQ+E+SCISIP+ K+ ++R +SS +NSS+ + +GV I TFVIGTHRPSVE
Sbjct: 654 QHLELQNEVSCISIPRTKYGKKRSNSS--ISENNSSMASTVSGVDINKTFVIGTHRPSVE 711
Query: 719 VLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEW 778
+ SF P G+ V+A G+I L +T GTA S CIPQDVRLV D++YVLAGLRNGMLLRFEW
Sbjct: 712 IWSFDPNGGVTVVACGTISLKSTAGTAKSFCIPQDVRLVFVDKYYVLAGLRNGMLLRFEW 771
Query: 779 PPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPV 838
P + + SS+ + + +S+ + +++ LP LQLIA RRIGITPV
Sbjct: 772 PTEPSHSSSINVVDTALSSI---------NLVNSTTMAINVNLPCMLQLIAIRRIGITPV 822
>gi|6671952|gb|AAF23212.1|AC016795_25 hypothetical protein [Arabidopsis thaliana]
gi|10998135|dbj|BAB03106.1| unnamed protein product [Arabidopsis thaliana]
Length = 1331
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/862 (63%), Positives = 650/862 (75%), Gaps = 59/862 (6%)
Query: 31 HYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
HYLAKC+L+ SVVLQVA+G+ RSP+S D+VFGKET IELV+IGEDGIV+SVCEQ VFGTI
Sbjct: 35 HYLAKCILRPSVVLQVAYGYFRSPSSRDIVFGKETCIELVVIGEDGIVESVCEQYVFGTI 94
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
KDLAV+P + K + NS MGKDLL V+SDSGKLSFL+F NEMH
Sbjct: 95 KDLAVIPQSSKLYS-NSLQMGKDLLAVLSDSGKLSFLSFSNEMH---------------- 137
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIA 210
SG +AVSAY DR LFSLS SS DII ++I YPSE + S+ +
Sbjct: 138 ------------SGLFLAVSAYHDRFALFSLSTSSMGDIIHQRISYPSEDGGNGSSIQ-- 183
Query: 211 QKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISVLS 270
+ISGTIWSMCFIS D + SKE+ PILAI++NR+G+L+NEL L WN++E +I ++S
Sbjct: 184 ---AISGTIWSMCFISKDFNE-SKEYAPILAIVINRKGSLMNELALFRWNVKEESICLIS 239
Query: 271 CFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPPALEEQN 330
+ E G LAH +VEVP S GFAF+FRIGD LLMDLRDP NP C++RTSL+F+P +L E++
Sbjct: 240 EYVETGALAHSIVEVPHSSGFAFLFRIGDVLLMDLRDPQNPCCLFRTSLDFVPASLMEEH 299
Query: 331 FVDESCRVHDVDDEGLFNVAACALLELRDY-----DPMCIDSDSGNAKEPSKHVCSWSWE 385
FV+ESCRV D DDEG NV CALLELRD+ DPM ID++S K SK+V SW+WE
Sbjct: 300 FVEESCRVQDGDDEGC-NVVVCALLELRDHEVRDHDPMFIDTESDIGKLSSKNVSSWTWE 358
Query: 386 PETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVE 445
PE + P+M+ C+D G+FFM E+ + DG KV+LSECLYKG PCK +LW+EG FL+ F E
Sbjct: 359 PENNHNPRMIICLDNGDFFMFELIYEDDGVKVNLSECLYKGLPCKDILWIEGGFLATFAE 418
Query: 446 MGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSG 505
M DG V K +L + S IQNIAPILD SV+D +EKRDQ+FACCGV PEGSLRIIRSG
Sbjct: 419 MADGTVFKLGTEKLHWMSSIQNIAPILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSG 478
Query: 506 ISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGF 565
I++EKLL+TAP+YQGITGTWTV+MK++D YHSFLVLSFVEETRVL VGL+F DVTDSVGF
Sbjct: 479 INVEKLLKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETRVLSVGLSFKDVTDSVGF 538
Query: 566 RPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGA 625
+ DVCT ACGLVADGLLVQIHQ+A+RLCMPTM AHS GIP+S P +SWFPE+VSISLGA
Sbjct: 539 QSDVCTFACGLVADGLLVQIHQDAIRLCMPTMDAHSDGIPVSSPFFSSWFPENVSISLGA 598
Query: 626 VAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKH--PERRKS 683
V N+I+VSTSNPCFL ILGV+S+S EIYE+Q + LQ E+SCIS+PQKH +R +
Sbjct: 599 VGQNLIVVSTSNPCFLSILGVKSVSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSRD 658
Query: 684 SSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKE-GLRVLASGSIVLTNTM 742
SSP N A+P+ + GYTF+IGTH+PSVEVLSF G+RVLASG + LTNTM
Sbjct: 659 SSP----DNFCKAAIPSAMEQGYTFLIGTHKPSVEVLSFTEDGVGVRVLASGLVSLTNTM 714
Query: 743 GTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNT 802
GT ISGCIPQDVRLVL DQ YVL+GLRNGMLLRFEW P SN P + F +
Sbjct: 715 GTVISGCIPQDVRLVLVDQLYVLSGLRNGMLLRFEWAPFSNSSGLNCPDY------FSHC 768
Query: 803 ENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQ 862
+ + KD LP+NL LIATRRIGITPVFLVP SDSLD+D+IALSDRPWLLQ
Sbjct: 769 KEEMDTVVG-----KKDNLPVNLLLIATRRIGITPVFLVPFSDSLDSDIIALSDRPWLLQ 823
Query: 863 TARHSLAYTSISFQPSTHATPV 884
TAR SL+YTSISFQPSTHATPV
Sbjct: 824 TARQSLSYTSISFQPSTHATPV 845
>gi|30681985|ref|NP_850565.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
gi|332641609|gb|AEE75130.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
Length = 1329
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/881 (60%), Positives = 636/881 (72%), Gaps = 89/881 (10%)
Query: 31 HYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
HYLAKC+L+ SVVLQVA+G+ RSP+S D+VFGKET IELV+IGEDGIV+SVCEQ VFGTI
Sbjct: 35 HYLAKCILRPSVVLQVAYGYFRSPSSRDIVFGKETCIELVVIGEDGIVESVCEQYVFGTI 94
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
KDLAV+P + K + NS MGKD
Sbjct: 95 KDLAVIPQSSKLYS-NSLQMGKD------------------------------------- 116
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIA 210
L+AV + +L S S +I YPSE + S+ +
Sbjct: 117 ---------------LLAVLSDSGKLSFLSFSNEM------HRISYPSEDGGNGSSIQ-- 153
Query: 211 QKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISVLS 270
+ISGTIWSMCFIS D + SKE+ PILAI++NR+G+L+NEL L WN++E +I ++S
Sbjct: 154 ---AISGTIWSMCFISKDFNE-SKEYAPILAIVINRKGSLMNELALFRWNVKEESICLIS 209
Query: 271 CFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPPALEEQN 330
+ E G LAH +VEVP S GFAF+FRIGD LLMDLRDP NP C++RTSL+F+P +L E++
Sbjct: 210 EYVETGALAHSIVEVPHSSGFAFLFRIGDVLLMDLRDPQNPCCLFRTSLDFVPASLMEEH 269
Query: 331 FVDESCRVHDVDDEGLFNVAACALLELRDY-----DPMCIDSDSGNAKEPSKHVCSWSWE 385
FV+ESCRV D DDEG NV CALLELRD+ DPM ID++S K SK+V SW+WE
Sbjct: 270 FVEESCRVQDGDDEGC-NVVVCALLELRDHEVRDHDPMFIDTESDIGKLSSKNVSSWTWE 328
Query: 386 PETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVE 445
PE + P+M+ C+D G+FFM E+ + DG KV+LSECLYKG PCK +LW+EG FL+ F E
Sbjct: 329 PENNHNPRMIICLDNGDFFMFELIYEDDGVKVNLSECLYKGLPCKDILWIEGGFLATFAE 388
Query: 446 MGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSG 505
M DG V K +L + S IQNIAPILD SV+D +EKRDQ+FACCGV PEGSLRIIRSG
Sbjct: 389 MADGTVFKLGTEKLHWMSSIQNIAPILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSG 448
Query: 506 ISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGF 565
I++EKLL+TAP+YQGITGTWTV+MK++D YHSFLVLSFVEETRVL VGL+F DVTDSVGF
Sbjct: 449 INVEKLLKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFVEETRVLSVGLSFKDVTDSVGF 508
Query: 566 RPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGA 625
+ DVCT ACGLVADGLLVQIHQ+A+RLCMPTM AHS GIP+S P +SWFPE+VSISLGA
Sbjct: 509 QSDVCTFACGLVADGLLVQIHQDAIRLCMPTMDAHSDGIPVSSPFFSSWFPENVSISLGA 568
Query: 626 VAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKH--PERRKS 683
V N+I+VSTSNPCFL ILGV+S+S EIYE+Q + LQ E+SCIS+PQKH +R +
Sbjct: 569 VGQNLIVVSTSNPCFLSILGVKSVSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSRD 628
Query: 684 SSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKE-GLRVLASGSIVLTNTM 742
SSP N A+P+ + GYTF+IGTH+PSVEVLSF G+RVLASG + LTNTM
Sbjct: 629 SSP----DNFCKAAIPSAMEQGYTFLIGTHKPSVEVLSFTEDGVGVRVLASGLVSLTNTM 684
Query: 743 GTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNT 802
GT ISGCIPQDVRLVL DQ YVL+GLRNGMLLRFEW P SN P + F +
Sbjct: 685 GTVISGCIPQDVRLVLVDQLYVLSGLRNGMLLRFEWAPFSNSSGLNCPDY------FSHC 738
Query: 803 ENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQ 862
+ + KD LP+NL LIATRRIGITPVFLVP SDSLD+D+IALSDRPWLLQ
Sbjct: 739 KEEMDTVVG-----KKDNLPVNLLLIATRRIGITPVFLVPFSDSLDSDIIALSDRPWLLQ 793
Query: 863 TARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
TAR SL+YTSISFQPSTHATPVCS ECP+GILFV+EN L+L
Sbjct: 794 TARQSLSYTSISFQPSTHATPVCSFECPQGILFVSENCLHL 834
>gi|356505471|ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806799 [Glycine max]
Length = 1278
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/616 (71%), Positives = 514/616 (83%), Gaps = 8/616 (1%)
Query: 1 MAVSEEVCSTAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVV 60
MAVSEE CS+A S S PSSSS+ AS +YL+KCVL+GSVVLQV H H+RSP+SNDV+
Sbjct: 1 MAVSEEECSSANSGSGPSSSSSSASAR---YYLSKCVLRGSVVLQVLHAHIRSPSSNDVI 57
Query: 61 FGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFN-AQNSQVMGKDLLVVIS 119
FGKETSIELV+I EDG VQSVC+Q VFGT+KDLA++PWN+KF A++ Q+ GKDLLV S
Sbjct: 58 FGKETSIELVVIDEDGNVQSVCDQPVFGTVKDLAILPWNEKFRVARDPQLWGKDLLVATS 117
Query: 120 DSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLF 179
DSGKLS L FCNEMHRF PV + LSNPGN + GR LAVDSSGC IA SAYEDRL LF
Sbjct: 118 DSGKLSLLTFCNEMHRFIPVTHIQLSNPGNQIYLPGRKLAVDSSGCFIASSAYEDRLALF 177
Query: 180 SLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPI 239
SLSMSSG DIID++I YPSE+E S SR Q+ I GTIWS+CFIS D RQPSKEHNP+
Sbjct: 178 SLSMSSG-DIIDERIVYPSENEGTASTSRSIQRIGIRGTIWSICFISQDSRQPSKEHNPV 236
Query: 240 LAIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGD 299
LA+I+NRRGALLNELLL+ WN++ H I V+S + EAGPLAH +VEVP S G AF+FR GD
Sbjct: 237 LAVIINRRGALLNELLLLEWNVKAHKIFVISQYVEAGPLAHDIVEVPNSGGLAFLFRAGD 296
Query: 300 ALLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRD 359
LLMDLRD NPSCV +T+LNFLP A+EEQ +V+ESC++HDVDDE F+VAACALLEL D
Sbjct: 297 VLLMDLRDHRNPSCVCKTNLNFLPNAMEEQTYVEESCKLHDVDDER-FSVAACALLELSD 355
Query: 360 YDPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHL 419
YDPMCIDSD+G A K++CSWSWEPE ++ P+M+FCVDTGEFFMIE+ F S+G KV+L
Sbjct: 356 YDPMCIDSDNGGANSGYKYICSWSWEPENNRDPRMIFCVDTGEFFMIEVLFDSEGPKVNL 415
Query: 420 SECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY 479
SECLYKG PCKALLWVE +L+A VEMGDGMVLK E+GRL Y +PIQNIAPILDM VVDY
Sbjct: 416 SECLYKGLPCKALLWVESGYLAALVEMGDGMVLKLEDGRLCYINPIQNIAPILDMEVVDY 475
Query: 480 HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFL 539
HDEK+DQMFACCGVAPEGSLRIIR+GI++E L RTA IYQG+TGTWTVRM+V+D +HSFL
Sbjct: 476 HDEKQDQMFACCGVAPEGSLRIIRNGINVENLHRTASIYQGVTGTWTVRMRVTDSHHSFL 535
Query: 540 VLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVA 599
VLSFVEETR+L VGL+FTDVTDSVGF+P+VCTLACGLV DGLLVQIH++ V+LC+PT A
Sbjct: 536 VLSFVEETRILSVGLSFTDVTDSVGFQPNVCTLACGLVTDGLLVQIHKSTVKLCLPTKAA 595
Query: 600 HSGGIPLSYPVCTSWF 615
HS GIPL P W+
Sbjct: 596 HSEGIPL--PSVEIWY 609
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 124/193 (64%), Positives = 152/193 (78%), Gaps = 7/193 (3%)
Query: 711 GTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRN 770
G PSVE+ F P G+ V+A G+I LTNT+GTAISGC+PQDVRLV ++YVLAGLRN
Sbjct: 599 GIPLPSVEIWYFAPGGGITVVACGTISLTNTVGTAISGCVPQDVRLVFVGKYYVLAGLRN 658
Query: 771 GMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIAT 830
GMLLRFEWP + P +PI+ I T ++ N+ + + T++F+ +++ P LQLIA
Sbjct: 659 GMLLRFEWPAE---PCPSSPIN--IVDTALSSINLVNSV--TNAFDKRNDFPSMLQLIAI 711
Query: 831 RRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECP 890
RRIGITPVFLVPL D+LDAD+I LSDRPWLL +ARHSL+Y+SISFQPSTH TPVCSVECP
Sbjct: 712 RRIGITPVFLVPLGDTLDADIITLSDRPWLLHSARHSLSYSSISFQPSTHVTPVCSVECP 771
Query: 891 KGILFVAENSLNL 903
KGILFVAENSL+L
Sbjct: 772 KGILFVAENSLHL 784
>gi|33146591|dbj|BAC79787.1| putative Splicing factor 3B subunit 3 [Oryza sativa Japonica Group]
gi|222636635|gb|EEE66767.1| hypothetical protein OsJ_23488 [Oryza sativa Japonica Group]
gi|429459546|gb|AFZ84679.1| spotted leaf 5 [Oryza sativa Japonica Group]
Length = 1355
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/887 (51%), Positives = 598/887 (67%), Gaps = 63/887 (7%)
Query: 32 YLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIK 91
YLAK VL+GS VL VA G RSP DVV KE S+ELV+IGEDG++QS+CEQ FG IK
Sbjct: 51 YLAKRVLRGSAVLHVAQGCFRSPDCVDVVLCKENSLELVVIGEDGVLQSICEQTTFGIIK 110
Query: 92 DLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSR 151
D+ V+ W ++ GK++LV++SDSGKLS L FC+EMHRFF +A + LS PGN R
Sbjct: 111 DVGVLNWRCTHFGLMPKIEGKEILVILSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLR 170
Query: 152 HQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIA- 210
H+LGR+LA+D +AVSAYED +S +D K+ P+ E++ A I+
Sbjct: 171 HRLGRILAIDRESRFVAVSAYEDEFAFVRVS-------VDHKLHAPN-GEIEEDAKIIST 222
Query: 211 --QKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISV 268
+SI GT+WSMCFIST +E+ P++A+I+NR G+ +N+L L G + + I
Sbjct: 223 AYNTSSIHGTVWSMCFIST---CLDEEYYPVVAMIVNR-GSDVNDLALYGLDSHKRTIDR 278
Query: 269 LSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPPALEE 328
+S + EAGPLA + E+P+ YGFA +FR GD LLMDLR+P + SC++R SL+ + +
Sbjct: 279 ISTYLEAGPLALEISEIPQLYGFALMFRAGDVLLMDLRNPKDISCIHRISLS--TSLIGD 336
Query: 329 QNFVDESCRVHDVDDEGLFNVAACALLELRDYDP--------MCIDSDSGNAKEPSKHVC 380
V++SCR DVDD+ VAACALLELRD M ID A S+ VC
Sbjct: 337 HVSVEDSCRGLDVDDD----VAACALLELRDSGNNMMRDDSYMDIDGTDNKAVVKSRIVC 392
Query: 381 SWSWEPET-DKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRF 439
SW+WEP P+++FC+D GEF ++E + +G KV L EC+++G PCK LLW++
Sbjct: 393 SWNWEPNAMQGHPRLIFCLDDGEFHLLEFSLDMEGVKV-LPECVHRGLPCKPLLWMDKGM 451
Query: 440 LSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+ FVEMGDGM+L+ EN RLV+ S IQN+APILD+++ D+H EK+DQMFACCG+ PEGSL
Sbjct: 452 VVGFVEMGDGMILQLENNRLVHKSAIQNVAPILDLAIADHHGEKQDQMFACCGMCPEGSL 511
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
R+IR+G+++EKLLRT PIY G+TG WT+RMK +D YHSFLVLSFVEETR+L VGL+F D+
Sbjct: 512 RVIRNGVNVEKLLRTDPIYHGVTGLWTLRMKRTDAYHSFLVLSFVEETRILSVGLSFNDI 571
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHV 619
D+VGF+ DVCTLACGLVADGLLVQIH V+LC+PT AH G L PVC W+P+ V
Sbjct: 572 CDAVGFQTDVCTLACGLVADGLLVQIHSKCVKLCLPTACAHPEGTLLPSPVCADWYPD-V 630
Query: 620 SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPE 679
+IS+GAV HN+++V+TSNPC L+ILGVRSLS YE+YE+QH++L E+SCISIPQ+ +
Sbjct: 631 TISVGAVGHNVVVVATSNPCCLYILGVRSLSSFQYELYEIQHVQLHYEVSCISIPQE--D 688
Query: 680 RRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLT 739
R +S S ++ A I + VIGTH PSV ++S P E + LA G I +
Sbjct: 689 WRLDNSSSSCATSGDFRKDFAANIRKFA-VIGTHEPSVHIISLEPGEAFQQLAVGHISVN 747
Query: 740 NTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATF 799
N +GT ISGCIP++VR V A +FY+LAGLRNGMLLRFE
Sbjct: 748 NALGTPISGCIPENVRFVAAARFYILAGLRNGMLLRFE---------------------- 785
Query: 800 RNTENIRSGIAATSSFESKDELPIN---LQLIATRRIGITPVFLVPLSDSLDADMIALSD 856
G SF + P + L LIA RRIGITPV LVPL D +AD+I L D
Sbjct: 786 ---SQTSKGHCFPGSFYKESSTPCDDTSLMLIAVRRIGITPVVLVPLHDRANADIIVLGD 842
Query: 857 RPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
RPWLLQ+ARHSLAY+SISF P++H TPV S +CP G+LFV+EN L+L
Sbjct: 843 RPWLLQSARHSLAYSSISFLPASHVTPVSSTDCPSGLLFVSENCLHL 889
>gi|255581562|ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223528782|gb|EEF30789.1| spliceosomal protein sap, putative [Ricinus communis]
Length = 1220
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/601 (72%), Positives = 509/601 (84%), Gaps = 7/601 (1%)
Query: 1 MAVSEEVCSTAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVV 60
MAVSEE CS AKSRSS S+S+ ++ HYLAKCVL+GSVVLQV +GH RSP+SND+V
Sbjct: 1 MAVSEEECSNAKSRSSSPSASSNSA-----HYLAKCVLRGSVVLQVVYGHFRSPSSNDIV 55
Query: 61 FGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISD 120
FGKETSIELVIIGEDGI+QS+CEQ VFGTIKDLAV+PWN+KF ++ Q+ GKDLL V SD
Sbjct: 56 FGKETSIELVIIGEDGILQSICEQPVFGTIKDLAVIPWNEKFCTRSPQMHGKDLLAVTSD 115
Query: 121 SGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFS 180
SGKLSFL FCNEMHRFFP+ + LSN GNS QLGR+LAVD+SGC IA SAY DRL LFS
Sbjct: 116 SGKLSFLIFCNEMHRFFPLTHIQLSNSGNSIRQLGRLLAVDTSGCFIATSAYVDRLALFS 175
Query: 181 LSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPIL 240
LS++ SDIID++I YP ESE TS +R Q+ +ISGTIWS+CFIS D Q SKEHNP+L
Sbjct: 176 LSITGSSDIIDEQIFYPPESEGHTSFTRSIQRPNISGTIWSICFISRDLSQSSKEHNPVL 235
Query: 241 AIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDA 300
AIILNR LLNELLL+ WNIR H I+V+ EAGP+ H +VEVP S GFAF+FR+GDA
Sbjct: 236 AIILNRSSELLNELLLLEWNIRGHTINVIP-NVEAGPI-HDIVEVPHSNGFAFLFRVGDA 293
Query: 301 LLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRDY 360
LLMDLRD H+P V +TS +FLP A+EEQNFV++SCRVHDVDD+ LFNVAACALL+L+DY
Sbjct: 294 LLMDLRDAHHPCRVCKTSFSFLPAAMEEQNFVEDSCRVHDVDDDSLFNVAACALLQLQDY 353
Query: 361 DPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLS 420
DPMCIDS+ G+ K SK+VCSWSWEPE DK PKM+FC+DTGEFFMIEI+F S+ +V+LS
Sbjct: 354 DPMCIDSEGGSVKSTSKYVCSWSWEPEPDKNPKMIFCIDTGEFFMIEISFDSEDLRVNLS 413
Query: 421 ECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYH 480
+C+YKG P K+LLWVEG FL+A VEMGDG+VLK EN RL Y SPIQNIAPILDMSVVD+H
Sbjct: 414 DCVYKGLPSKSLLWVEGGFLAALVEMGDGIVLKVENDRLRYASPIQNIAPILDMSVVDHH 473
Query: 481 DEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLV 540
DEK++QMF CCGVAPEGSLRIIRSGIS+EKLLRTAPIYQG+TGTW +RMKV+D YHSF+V
Sbjct: 474 DEKQEQMFGCCGVAPEGSLRIIRSGISVEKLLRTAPIYQGVTGTWALRMKVTDLYHSFVV 533
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
LSFVEETRVL VG++F DVTDS GF P+VCTLACGLV DGLLVQIHQ AVRLC+PT VAH
Sbjct: 534 LSFVEETRVLSVGVSFADVTDSAGFLPNVCTLACGLVGDGLLVQIHQTAVRLCLPTQVAH 593
Query: 601 S 601
+
Sbjct: 594 A 594
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 158/207 (76%), Gaps = 27/207 (13%)
Query: 717 VEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRF 776
VEVL FVP EGLRVLA G+I LTNT+GTAISGC+PQDVRLVL D+ YVL+GLRNGMLLRF
Sbjct: 596 VEVLCFVPDEGLRVLARGTISLTNTLGTAISGCVPQDVRLVLVDRLYVLSGLRNGMLLRF 655
Query: 777 EWPPDS-------NIPSSVAPIHSPISATFRNTENIRSGIAATSSF--ESK--------- 818
EWP S IP PI S ++ N SG++ T++ ES+
Sbjct: 656 EWPSSSSSSISSMEIPYYGYPIDSCMT-------NACSGLSTTTAVFPESQTCSVDLTGG 708
Query: 819 --DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQ 876
D PINLQLIATRRIG+TPVFLVPL+DSLDADMIALSDRPWLLQTARH L+YTSISFQ
Sbjct: 709 AMDGPPINLQLIATRRIGVTPVFLVPLTDSLDADMIALSDRPWLLQTARHGLSYTSISFQ 768
Query: 877 PSTHATPVCSVECPKGILFVAENSLNL 903
PSTH+TPVCSVECPKG+LFVAENSL+L
Sbjct: 769 PSTHSTPVCSVECPKGLLFVAENSLHL 795
>gi|218199276|gb|EEC81703.1| hypothetical protein OsI_25307 [Oryza sativa Indica Group]
Length = 1429
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/887 (51%), Positives = 597/887 (67%), Gaps = 63/887 (7%)
Query: 32 YLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIK 91
YLAK VL+GS VL VA G RSP DVV KE S+ELV+IGEDG++QS+CEQ FG IK
Sbjct: 51 YLAKRVLRGSAVLHVAQGCFRSPDCVDVVLCKENSLELVVIGEDGVLQSICEQTTFGIIK 110
Query: 92 DLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSR 151
D+ V+ W ++ GK++LV++SDSGKLS L FC+EMHRFF +A + LS PGN R
Sbjct: 111 DVGVLNWRCTHFGLMPKIEGKEILVILSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLR 170
Query: 152 HQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIA- 210
H+LGR+LA+D +AVSAYED +S +D K+ P+ E++ A I+
Sbjct: 171 HRLGRILAIDRESRFVAVSAYEDEFAFVRVS-------VDHKLHAPN-GEIEEDAKIIST 222
Query: 211 --QKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISV 268
+SI GT+WSMCFIST +E+ P++A+I+NR G+ +N+L L G + + I
Sbjct: 223 AYNTSSIHGTVWSMCFIST---CLDEEYYPVVAMIVNR-GSDVNDLALYGLDSHKRTIDR 278
Query: 269 LSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPPALEE 328
+S + EAGPLA + E+P+ YGFA +FR GD LLMDLR+P + SC++R SL+ + +
Sbjct: 279 ISTYLEAGPLALEISEIPQLYGFALMFRAGDVLLMDLRNPKDISCIHRISLS--TSLIGD 336
Query: 329 QNFVDESCRVHDVDDEGLFNVAACALLELRDYDP--------MCIDSDSGNAKEPSKHVC 380
V++SCR DVDD+ VAACALLELRD M ID A S+ VC
Sbjct: 337 HVSVEDSCRGLDVDDD----VAACALLELRDSGNNMMRDDSYMDIDGTDNKAVVKSRIVC 392
Query: 381 SWSWEPET-DKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRF 439
SW+WEP P+++FC+D GEF ++E + +G KV L EC+++G PCK LLW++
Sbjct: 393 SWNWEPNAMQGHPRLIFCLDDGEFHLLEFSLDMEGVKV-LPECVHRGLPCKPLLWMDKGM 451
Query: 440 LSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+ FVEMGDGM+L+ EN RLV+ S IQN+APILD+++ D+H EK+DQMFACCG+ PEGSL
Sbjct: 452 VVGFVEMGDGMILQLENNRLVHKSAIQNVAPILDLAIADHHGEKQDQMFACCGMCPEGSL 511
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
R+IR+G+++EKLLRT PIY G+TG WT+RMK +D YHSFLVLSFVEETR+L VGL+F D+
Sbjct: 512 RVIRNGVNVEKLLRTDPIYHGVTGLWTLRMKRTDAYHSFLVLSFVEETRILSVGLSFNDI 571
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHV 619
D+VGF+ DVCTLACGLVADGLLVQIH V+LC+PT AH G L PVC W+P+ V
Sbjct: 572 CDAVGFQTDVCTLACGLVADGLLVQIHSKCVKLCLPTACAHPEGTLLPSPVCADWYPD-V 630
Query: 620 SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPE 679
+IS+GAV HN+++V+TSNPC L+ILGVRSLS YE+YE+QH++L E+SCISIPQ+ +
Sbjct: 631 TISVGAVGHNVVVVATSNPCCLYILGVRSLSSFQYELYEIQHVQLHYEVSCISIPQE--D 688
Query: 680 RRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLT 739
R +S S ++ A I + VIGTH PSV ++S P E + LA G I +
Sbjct: 689 WRLDNSSSSCATSGDFRKDFAANIRKFA-VIGTHEPSVHIISLEPGEAFQQLAVGHISVN 747
Query: 740 NTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATF 799
N +GT ISGCIP++VR V A +FY+LAGLRNGMLLRFE
Sbjct: 748 NALGTPISGCIPENVRFVAAARFYILAGLRNGMLLRFE---------------------- 785
Query: 800 RNTENIRSGIAATSSFESKDELPIN---LQLIATRRIGITPVFLVPLSDSLDADMIALSD 856
G SF + P + L LIA RRIGITPV LVPL D +AD+I L D
Sbjct: 786 ---SQTSKGHCFPGSFYKESSTPCDDTSLMLIAVRRIGITPVVLVPLHDRANADIIVLGD 842
Query: 857 RPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
RPWLL +ARHSLAY+SISF P++H TPV S +CP G+LFV+EN L+L
Sbjct: 843 RPWLLHSARHSLAYSSISFLPASHVTPVSSTDCPNGLLFVSENCLHL 889
>gi|414883930|tpg|DAA59944.1| TPA: hypothetical protein ZEAMMB73_987949 [Zea mays]
Length = 1355
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/893 (50%), Positives = 608/893 (68%), Gaps = 61/893 (6%)
Query: 31 HYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
HY+AK VL+GS VL VA G RSP S DVV KETS+ELV +G+DG++QS+CEQ +FG I
Sbjct: 37 HYIAKRVLRGSAVLHVAEGCFRSPDSADVVLAKETSLELVAVGDDGVLQSICEQDIFGII 96
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
KD+ V+ W+ + N Q+ KDLLVV+SDSGKLS L FC+EMHRFF +A + LS PGN
Sbjct: 97 KDIGVLQWHSRHNGLIPQIECKDLLVVLSDSGKLSLLYFCSEMHRFFAIANIELSKPGNL 156
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLF----SLSMSSGSDIIDKKICYPSESEVDTSA 206
RH LGR+LA+D +AVS+YED+ L S S S I +KK YP E+E D
Sbjct: 157 RHHLGRILAIDRESNFVAVSSYEDKFALIHVSVSQSGSGSGIISEKKYFYPPENEDD--- 213
Query: 207 SRI--AQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREH 264
+RI + + SI GTIW+M FIS P+ +E+ P+LA+I+NR+G+ +N+L L G++
Sbjct: 214 ARIITSSRTSIRGTIWTMRFISV-PQD--EEYYPVLAMIINRKGSDVNDLSLFGYDSSSC 270
Query: 265 AISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPP 324
I+ LS + E GPL V E+P ++GFA + R+GDALL+DLR+P N C+ R SL
Sbjct: 271 VINHLSSYSEIGPLVLDVSEIPETFGFALLLRVGDALLLDLRNPTNVCCIQRVSLT--TN 328
Query: 325 ALEEQNFVDESCRVHDVDDEGLFNVAACALLELRD------YDPMCIDSDSGNAKEPSKH 378
+ E V++ C DVDD+ VAACALLELRD D +D D +++ K
Sbjct: 329 LIGEPITVEDPCPGLDVDDD----VAACALLELRDSGNNIMKDDGYMDIDGVDSRSNVKP 384
Query: 379 --VCSWSWEPET---DKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALL 433
VCSWSWEP +++FC+D GEF ++E +G K++ E + + PC+ L
Sbjct: 385 RIVCSWSWEPPDPVRRGCARLLFCLDDGEFHILEFTLDVEGAKLYTFEYIDRTLPCRPLF 444
Query: 434 WVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
W++ R + FVEMGDGM+ K + RL++ S IQN+APILD+++ DYH EK+DQMFACCG+
Sbjct: 445 WMKNRMIIGFVEMGDGMIFKLGHRRLLHKSTIQNVAPILDLAIADYHGEKQDQMFACCGM 504
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
+PEGSLR++R+G+++++LL+T IYQG+TG WT+RMK +D YHSFLVLSFVEETR+L VG
Sbjct: 505 SPEGSLRVLRNGVNVDRLLKTEAIYQGVTGLWTLRMKATDAYHSFLVLSFVEETRILSVG 564
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
L+F D++D+VGF+PDVCTLACGLVAD LLVQI+ V++C+PT+ AH G PL+ P+CT
Sbjct: 565 LSFNDISDAVGFQPDVCTLACGLVADNLLVQIYSKGVKVCLPTVYAHPEGAPLTSPICTD 624
Query: 614 WFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
W+P ++IS+GAV HN+++V+TSNPC L++LGVRS S YE+Y H++LQ E+SCISI
Sbjct: 625 WYPA-ITISVGAVGHNIVVVATSNPCCLYVLGVRSSSSYQYELYATHHVQLQYEVSCISI 683
Query: 674 PQK---HPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRV 730
PQ+ H S + + P V + VIGTHRPSVE++S P E LRV
Sbjct: 684 PQEDCIHDNVSFSCGEGDDICKNP----PPKVNVCKFAVIGTHRPSVEIISLEPGEALRV 739
Query: 731 LASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAP 790
L G++ + N +G +SGCIP++VR V A++FY+LAGLRNGMLLRFE +P +
Sbjct: 740 LTIGTVSVNNALGAPMSGCIPENVRFVAAERFYILAGLRNGMLLRFESETRDYLPGFL-- 797
Query: 791 IHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDAD 850
+++ S I + ++F LQLI+ RRIGITPV LVP+ DS +AD
Sbjct: 798 --------YKD-----SSIPSVNTF---------LQLISIRRIGITPVLLVPIHDSANAD 835
Query: 851 MIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+I LSDRPWLL ARHSLAY+SISF ++H TPV SV+CP G+LFVAE+ L+L
Sbjct: 836 IIVLSDRPWLLHAARHSLAYSSISFLSASHVTPVSSVDCPNGLLFVAESCLHL 888
>gi|356570929|ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799711 [Glycine max]
Length = 1258
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/602 (71%), Positives = 503/602 (83%), Gaps = 6/602 (0%)
Query: 1 MAVSEEVCSTAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVV 60
MAVSEE CS+AKS SS SSS+ ++ +YL+KCV +GSVVL V H H+RSP+SNDVV
Sbjct: 1 MAVSEEECSSAKSGSSGPSSSSSSASR---YYLSKCVFRGSVVLHVLHAHIRSPSSNDVV 57
Query: 61 FGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNA-QNSQVMGKDLLVVIS 119
FGKETSIELV+I EDG VQSV +Q VFGT+KDLA++PWN+KF A ++ Q+ GKDLLV S
Sbjct: 58 FGKETSIELVVIDEDGNVQSVFDQPVFGTLKDLAILPWNEKFRAARDPQLWGKDLLVATS 117
Query: 120 DSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLF 179
DSGKLS L FCNEMHRF PV + LSNPGN GR LAVDSSGC IA SAYEDRL LF
Sbjct: 118 DSGKLSLLTFCNEMHRFVPVTHIQLSNPGNQMDFPGRKLAVDSSGCFIAASAYEDRLALF 177
Query: 180 SLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPI 239
SLSMSSG DIID++I YPSESE S SR Q+ SIS TIWS+CFIS D RQPSKEHNP+
Sbjct: 178 SLSMSSG-DIIDERIVYPSESEGTASTSRSIQRTSISVTIWSICFISQDSRQPSKEHNPV 236
Query: 240 LAIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGD 299
LA+I+NRR ALLNELLL+ WN++ I V+S + EAGPLAH +VEVP S G AF+FR GD
Sbjct: 237 LALIINRREALLNELLLLEWNVKARKIFVISQYVEAGPLAHDIVEVPNSGGLAFLFRAGD 296
Query: 300 ALLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRD 359
LLMDLRD NPSCV +T+LNFLP A+EEQ +V++SC++HDVDDE F+VAACALLEL D
Sbjct: 297 VLLMDLRDHRNPSCVCKTNLNFLPHAMEEQTYVEDSCKLHDVDDER-FSVAACALLELSD 355
Query: 360 YDPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHL 419
YDPMCIDSD+G A K++CSWSWEPE ++ PKM+FCVDTGEFFMIE+ F S+G KV+L
Sbjct: 356 YDPMCIDSDNGGANSGYKYICSWSWEPENNRDPKMIFCVDTGEFFMIEVLFNSEGPKVNL 415
Query: 420 SECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY 479
SECLYKG PCKALLWVEG +L+A VEMGDGMVLK E+GRL YT+PIQNIAPILDM VVDY
Sbjct: 416 SECLYKGLPCKALLWVEGGYLAALVEMGDGMVLKLEDGRLCYTNPIQNIAPILDMEVVDY 475
Query: 480 HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFL 539
HDEK DQMFACCGVAPEGSLRIIR+GI++E L RTA IYQG++GTWTVRMKV+D +HSFL
Sbjct: 476 HDEKHDQMFACCGVAPEGSLRIIRNGINVENLHRTASIYQGVSGTWTVRMKVTDSHHSFL 535
Query: 540 VLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVA 599
VLSF++ETR+L VGL+FTDVTDSVGF+P+VCTLACGLV DGLLVQIH++ V+LC+PT +
Sbjct: 536 VLSFLDETRILSVGLSFTDVTDSVGFQPNVCTLACGLVTDGLLVQIHRSTVKLCLPTKAS 595
Query: 600 HS 601
HS
Sbjct: 596 HS 597
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 141/187 (75%), Gaps = 7/187 (3%)
Query: 717 VEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRF 776
VE+ F P G+ V+A G+I LTNT+G+ S IPQDVRLV AD++YVLAGLRNGMLLRF
Sbjct: 599 VEIWFFAPGGGITVVACGTISLTNTIGSVKSDSIPQDVRLVSADKYYVLAGLRNGMLLRF 658
Query: 777 EWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGIT 836
EWP + S + + + +S+T N N + T++F+ +++LP LQLIA RRIGIT
Sbjct: 659 EWPAEPCPSSPINMVDTALSST--NLVN-----SVTNAFDKRNDLPSMLQLIAIRRIGIT 711
Query: 837 PVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFV 896
P+FLVPL D+LDAD+I L+DRPWLL +AR L+YTSISFQP+TH TPV VE PKGILFV
Sbjct: 712 PIFLVPLGDTLDADIIVLADRPWLLHSARQGLSYTSISFQPATHVTPVSCVEFPKGILFV 771
Query: 897 AENSLNL 903
AENSL+L
Sbjct: 772 AENSLHL 778
>gi|358348106|ref|XP_003638090.1| DNA damage-binding protein, partial [Medicago truncatula]
gi|355504025|gb|AES85228.1| DNA damage-binding protein, partial [Medicago truncatula]
Length = 642
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/648 (65%), Positives = 515/648 (79%), Gaps = 13/648 (2%)
Query: 192 KKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALL 251
++I YPSESE S SR QK SISGTIWSMCFIS D RQP K NP+LAIILNRRGALL
Sbjct: 7 QRIIYPSESEETASTSRTMQKTSISGTIWSMCFISVDSRQPIKGQNPVLAIILNRRGALL 66
Query: 252 NELLLVGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNP 311
NELLL+ WN++ H +SV+S + EAGPLAH +VEVP S G AF+FR GD LLMDLRDPHNP
Sbjct: 67 NELLLLEWNVKAHIVSVISQYVEAGPLAHNIVEVPNSPGLAFLFRAGDVLLMDLRDPHNP 126
Query: 312 SCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRDYDPMCIDSDSGN 371
CVY+T LN LP A+EEQ +VD+SC++HD+DDEG F+VAACALL+L DYDPMCIDSDSG
Sbjct: 127 LCVYKTCLNILPNAIEEQTYVDDSCKLHDLDDEG-FSVAACALLQLSDYDPMCIDSDSGG 185
Query: 372 AKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA 431
K++CSWSWEPE ++P+M+FCVDTGEFFMIE+ F SDG K+ LSECLYKG PCK
Sbjct: 186 TNSGPKYICSWSWEPENYEVPRMIFCVDTGEFFMIEVYFDSDGPKLSLSECLYKGLPCKE 245
Query: 432 LLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACC 491
LLWV+ +L++ VEMGD +VLK ++GRL +T+ IQNIAPI D++ DYHDEK DQMFACC
Sbjct: 246 LLWVKEGYLASIVEMGDSVVLKLKDGRLCFTNLIQNIAPIFDVTSGDYHDEKHDQMFACC 305
Query: 492 GVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLR 551
GV PEGSLR+I+SGI++EKLLRT Y+G+ GTWTVRMK+SD YHSFLVLSF+ ETR+L
Sbjct: 306 GVTPEGSLRVIQSGINVEKLLRTPSTYEGVAGTWTVRMKISDQYHSFLVLSFLGETRILS 365
Query: 552 VGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVC 611
VGL+FTDVTDSVGF+P+VCTLACGLV+DGLLVQI+Q+AV+LC+PT HS GIPLS P+C
Sbjct: 366 VGLSFTDVTDSVGFQPNVCTLACGLVSDGLLVQIYQSAVKLCLPTKDGHSEGIPLSSPIC 425
Query: 612 TSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCI 671
TSW+P++++ISLGAV HN I+VSTSNPCFLFILGVR LS YEIYEMQH+ LQ+E+SCI
Sbjct: 426 TSWYPDNLNISLGAVGHNFIVVSTSNPCFLFILGVRMLSAYQYEIYEMQHLELQNEVSCI 485
Query: 672 SIPQ-KHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRV 730
SIP+ K+ ++R +SS +NSS+ + +GV I TFVIGTHRPSVE+ SF P G+ V
Sbjct: 486 SIPRTKYGKKRSNSS--ISENNSSMASTVSGVDINKTFVIGTHRPSVEIWSFDPNGGVTV 543
Query: 731 LASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAP 790
+A G+I L +T GTA S CIPQDVRLV D++YVLAGLRNGMLLRFEWP + + SS+
Sbjct: 544 VACGTISLKSTAGTAKSFCIPQDVRLVFVDKYYVLAGLRNGMLLRFEWPTEPSHSSSINV 603
Query: 791 IHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPV 838
+ + +S+ + +++ LP LQLIA RRIGITPV
Sbjct: 604 VDTALSSI---------NLVNSTTMAINVNLPCMLQLIAIRRIGITPV 642
>gi|357111224|ref|XP_003557414.1| PREDICTED: DNA damage-binding protein 1-like [Brachypodium
distachyon]
Length = 1356
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/885 (49%), Positives = 600/885 (67%), Gaps = 53/885 (5%)
Query: 31 HYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
HYLAK VL GS V VA GH RS ++VV KETS+ELV++G+DG++QS+CEQ+ FG I
Sbjct: 47 HYLAKRVLHGSAVQHVARGHFRSEHLSEVVLCKETSLELVVVGDDGVLQSLCEQSTFGII 106
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
KD+ V+ W K ++ GK++LV++SDSGKLS L FC EMHRF + + LS PGN
Sbjct: 107 KDVGVLDWRFKHFGIWPEIEGKEILVLLSDSGKLSLLYFCCEMHRFIAIGNIELSKPGNM 166
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIA 210
R QLGR+LA++ +AVSAYED + + S +K+I E + +
Sbjct: 167 RDQLGRILAINQDSEWVAVSAYEDEFAIVHVERSPHVYGPNKEIV-----EGAKISHAVY 221
Query: 211 QKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISVLS 270
+ N I GT+WSMCF+ T +K++ P++A+++NR+G+ +N+L + G + I +S
Sbjct: 222 KTNDICGTVWSMCFMRT--HCSTKDYFPVVAMVINRKGSEVNDLAMYGLVPNDGGIQHIS 279
Query: 271 CFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPPALEEQN 330
F E GPLA V E+P+ GFA +FR GD L++DLRDP + SC S++ EQ
Sbjct: 280 YFLEPGPLALEVAEIPQLGGFAVLFRAGDILILDLRDPKDISCT--NSISMTGSLAGEQI 337
Query: 331 FVDESCRVHDVDDEGLFNVAACALLELRDY--------DPMCIDSDSGNAKEPSKHVCSW 382
V++SCR DVDD+ VAACALLELRD + M ID S+ +CSW
Sbjct: 338 SVEDSCRGLDVDDD----VAACALLELRDSGNNIMIDDNYMAIDGVDNLGSMKSRIICSW 393
Query: 383 SWEPETDK-IPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLS 441
SWEPE + P+++FC+D GE+ ++E + ++G KV L E +++G PCK LLW+ ++
Sbjct: 394 SWEPEAARGRPRLIFCLDNGEYHILEFNWDTEGVKV-LPESVHRGLPCKPLLWMNRGMIA 452
Query: 442 AFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRI 501
FVEMGDGM+L+ E+GRLV+ S +QN+ PILD+++ DYH EK+DQMF+C G+ PEGSLR+
Sbjct: 453 GFVEMGDGMILQLEHGRLVHKSSVQNVGPILDLAIADYHGEKQDQMFSCSGMCPEGSLRV 512
Query: 502 IRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTD 561
IR+GI++EKLLRT PIYQG+TG WT+RMK +D YHSFLVL+FVEETR+L VGL+F D++D
Sbjct: 513 IRNGINVEKLLRTEPIYQGVTGLWTLRMKRTDMYHSFLVLAFVEETRILSVGLSFNDISD 572
Query: 562 SVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSI 621
+VGF+PDVCTLACGL+ADG+LVQIH V+LC+PT AH G PL+ PVC W+P+ V+I
Sbjct: 573 AVGFQPDVCTLACGLIADGVLVQIHSKGVKLCLPTAYAHPEGAPLTSPVCVDWYPD-VTI 631
Query: 622 SLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERR 681
S+GAV HN++ V+TSNPC L+IL VR LS YE+YE+QH++L+ E+SCISIP++ R
Sbjct: 632 SVGAVGHNIVAVATSNPCCLYILSVRPLSSFQYELYEIQHVQLRYEVSCISIPEEDSRR- 690
Query: 682 KSSSPISL---VSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
SP+++ LPA V + VIGTH+PSVEV+S P E +L+ GSI +
Sbjct: 691 ---SPVAVRRAFGRGKRNNLPAKVDVRMFAVIGTHKPSVEVISLEPGEAFMLLSIGSISV 747
Query: 739 TNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISAT 798
N+ G +SG IP+ VR V +++FY+LAGLRNGMLLRFE S + H +
Sbjct: 748 NNSFGAPVSGRIPESVRFVASERFYILAGLRNGMLLRFE--------SETSEEHYLPDSF 799
Query: 799 FRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRP 858
++ SS S + L LQLIA R IGITPV LVPLSDS ++D+I LSDR
Sbjct: 800 YKE-----------SSTHSVNTL---LQLIAMRHIGITPVGLVPLSDSANSDIILLSDRS 845
Query: 859 WLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
WLL +RHSLAY+SISF P++H TPV S++CP G+LFVAEN L+L
Sbjct: 846 WLLHASRHSLAYSSISFLPASHVTPVSSMDCPSGLLFVAENCLHL 890
>gi|326510951|dbj|BAJ91823.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1360
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/900 (48%), Positives = 593/900 (65%), Gaps = 81/900 (9%)
Query: 31 HYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
HYLAK VL GS V VA GH RS ++V K TS+ELV++GEDG++QS+CEQ+ FG +
Sbjct: 49 HYLAKRVLNGSAVQHVARGHFRSEHLWEIVLCKGTSLELVVVGEDGVLQSICEQSTFGIV 108
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
KD+ V+ W K ++ GK++LV++SDSGKLS L FC +MHRF P+ + LS PGN+
Sbjct: 109 KDVGVLDWRFKHFGIWPEIEGKEILVLLSDSGKLSLLYFCCQMHRFIPIGNIELSKPGNT 168
Query: 151 RHQLGRMLAVDSSGCLIAVSAYED-----RLGLFSLSMSSGSDIIDK-KICYPSESEVDT 204
R QLGR+LA+D +A+SAYED R+G +I++K KI +
Sbjct: 169 RDQLGRILAIDHDSAWVAISAYEDAFAVVRVGRTQHVYGPNKEIVEKAKIIHA------- 221
Query: 205 SASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREH 264
+ + + I GT+WSMCF+ T R E+ P++A+I+NR+G+ N+L + +
Sbjct: 222 ----VYKASDIRGTVWSMCFMRT--RCSMDEYYPVVAMIINRKGSDANDLSMYALAANDG 275
Query: 265 AISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPP 324
I LS + E GPLA + E+P+ GF +FR GD L++DLRDP + C R S+
Sbjct: 276 GIQYLSSYSEPGPLALEIAEIPQLDGFGLLFRAGDILIVDLRDPKDICCTIRISMT--GS 333
Query: 325 ALEEQNFVDESCRVHDVDDEGLFNVAACALLELRDYDP--------MCIDSDSGNAKEPS 376
+ EQ V++SCR DVDD+ VAACALLELRD M ID S
Sbjct: 334 LVGEQISVEDSCRGLDVDDD----VAACALLELRDSGNNIMMDDSYMAIDGADNPGSMKS 389
Query: 377 KHVCSWSWEPETDK-IPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWV 435
+ VCSWSWEP+ + P+++FC+D GEF ++E + ++G KV L E + +G PCK LLW+
Sbjct: 390 RVVCSWSWEPDAIRGQPRLIFCLDDGEFHILEFNWDTEGLKV-LPERVRRGLPCKPLLWM 448
Query: 436 EGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAP 495
+ ++ FVEMGDGM+L E+G LV+ S +QN+ P+LD+++ DYH EK+DQ+F+CCG+ P
Sbjct: 449 DRGMIAGFVEMGDGMILHLEHGGLVHKSTVQNVGPMLDLAIADYHGEKQDQLFSCCGMCP 508
Query: 496 EGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN 555
EGSLR+IR+G+++EKLLRT PIYQGITG WT+RMK +D YHSFLVL+FVEETR+L VGL+
Sbjct: 509 EGSLRVIRNGVNVEKLLRTEPIYQGITGLWTLRMKRTDTYHSFLVLAFVEETRILSVGLS 568
Query: 556 FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF 615
F D++D+VGF+P+VCTLACGL+ADGLLVQIH V+LC+PT AH G L+ PVC W+
Sbjct: 569 FNDISDAVGFQPEVCTLACGLIADGLLVQIHSKGVKLCLPTSYAHPEGATLTSPVCVDWY 628
Query: 616 PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQ 675
P+ V+IS+GAV H+++ V+TSNPC L+IL VR LS YE+YE QH++LQ E+SCISIP+
Sbjct: 629 PD-VTISVGAVGHDVVAVATSNPCCLYILRVRPLSSLQYELYETQHVQLQYEVSCISIPE 687
Query: 676 KHPERRKSSSPIS-----LVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRV 730
+ R SS I N+SV A V + VIGTH+PSVEV+S P E R+
Sbjct: 688 EDSRLRTPSSAIGGDFRERKGNNSV----AEVNVRMFAVIGTHKPSVEVISLEPDEAFRL 743
Query: 731 LASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFE-------WPPDSN 783
L++GSI + N +G +SGCIP++VR+V +++FY+LAGLRNGMLLRFE + P S
Sbjct: 744 LSTGSISVNNALGAPVSGCIPENVRVVASERFYILAGLRNGMLLRFESGTSKDQYLPGSF 803
Query: 784 IPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPL 843
S AP L LQL+A R IGITPV LVPL
Sbjct: 804 YKESFAP-----------------------------SLNTLLQLVAIRHIGITPVGLVPL 834
Query: 844 SDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
DS ++D+I LSDR WLL +RHSLAY+SISF P++H PV SV+CP G+LFVAEN L+L
Sbjct: 835 RDSANSDIIVLSDRSWLLHASRHSLAYSSISFLPASHVIPVSSVDCPSGLLFVAENCLHL 894
>gi|326519701|dbj|BAK00223.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1360
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/896 (48%), Positives = 592/896 (66%), Gaps = 73/896 (8%)
Query: 31 HYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
HYLAK VL GS V VA GH RS ++V K TS+ELV++GEDG++QS+CEQ+ FG +
Sbjct: 49 HYLAKRVLNGSAVQHVARGHFRSEHLWEIVLCKGTSLELVVVGEDGVLQSICEQSTFGIV 108
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
KD+ V+ W K ++ GK++LV++SDSGKLS L FC +MHRF P+ + LS PGN+
Sbjct: 109 KDVGVLDWRFKHFGIWPEIEGKEILVLLSDSGKLSLLYFCCQMHRFIPIGNIELSKPGNT 168
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSA--SR 208
R QLGR+LA+D +A+SAYED + + + + + P++ V+ +
Sbjct: 169 RDQLGRILAIDHDSAWVAISAYEDAFAVVRVGRT-------QHVYGPNKEIVEKTKIIHA 221
Query: 209 IAQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISV 268
+ + + I GT+WSMCF+ T R E+ P++A+I+NR+G+ N+L + + I
Sbjct: 222 VYKASDIRGTVWSMCFMRT--RCSMDEYYPVVAMIINRKGSDANDLSMYALAANDGGIQY 279
Query: 269 LSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPPALEE 328
LS + E GPLA + E+P GF +FR GD L++DLRDP + C R S+ + E
Sbjct: 280 LSSYSEPGPLALEIAEIPHLDGFGLLFRAGDILIVDLRDPKDICCTIRISMT--GSLVGE 337
Query: 329 QNFVDESCRVHDVDDEGLFNVAACALLELRDYDP--------MCIDSDSGNAKEPSKHVC 380
Q V++SCR DVDD+ VAACALLELRD M ID S+ VC
Sbjct: 338 QISVEDSCRGLDVDDD----VAACALLELRDSGNNIMMDDSYMAIDGADNPGSMKSRVVC 393
Query: 381 SWSWEPETDK-IPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRF 439
SWSWEP+ + P+++FC+D GEF ++E + ++G KV L E + +G PCK LLW++
Sbjct: 394 SWSWEPDAIRGQPRLIFCLDDGEFHILEFNWDTEGLKV-LPERVRRGLPCKPLLWMDRGM 452
Query: 440 LSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
++ FVEMGDGM+L E+G LV+ S +QN+ P+LD+++ DYH EK+DQ+F+CCG+ PEGSL
Sbjct: 453 IAGFVEMGDGMILHLEHGGLVHKSTVQNVGPMLDLAIADYHGEKQDQLFSCCGMCPEGSL 512
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
R+IR+G+++EKLLRT PIYQGITG WT+RMK +D YHSFLVL+FVEETR+L VGL+F D+
Sbjct: 513 RVIRNGVNVEKLLRTEPIYQGITGLWTLRMKRTDTYHSFLVLAFVEETRILSVGLSFNDI 572
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHV 619
+D+VGF+P+VCTLACGL+ADGLLVQIH V+LC+PT AH G L+ PVC W+P+ V
Sbjct: 573 SDAVGFQPEVCTLACGLIADGLLVQIHSKGVKLCLPTSYAHPEGATLTSPVCVDWYPD-V 631
Query: 620 SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPE 679
+IS+GAV H+++ V+TSNPC L+IL VR LS YE+YE QH++LQ E+SCISIP++
Sbjct: 632 TISVGAVGHDVVAVATSNPCCLYILRVRPLSSLQYELYETQHVQLQYEVSCISIPEEDSR 691
Query: 680 RRKSSSPIS-----LVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG 734
R SS I N+SV A V + VIGTH+PSVEV+S P E R+L++G
Sbjct: 692 LRTPSSAIGGDFRERKGNNSV----AEVNVRMFAVIGTHKPSVEVISLEPDEAFRLLSTG 747
Query: 735 SIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFE-------WPPDSNIPSS 787
SI + N +G +SGCIP++VR+V +++FY+LAGLRNGMLLRFE + P S S
Sbjct: 748 SISVNNALGAPVSGCIPENVRVVASERFYILAGLRNGMLLRFESGTSKDQYLPGSFYKES 807
Query: 788 VAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSL 847
AP L LQL+A R IGITPV LVPL DS
Sbjct: 808 FAP-----------------------------SLNTLLQLVAIRHIGITPVGLVPLRDSA 838
Query: 848 DADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++D+I LSDR WLL +RHSLAY+SISF P++H PV SV+CP G+LFVAEN L+L
Sbjct: 839 NSDIIVLSDRSWLLHASRHSLAYSSISFLPASHVIPVSSVDCPSGLLFVAENCLHL 894
>gi|168031491|ref|XP_001768254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680432|gb|EDQ66868.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1391
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/918 (45%), Positives = 580/918 (63%), Gaps = 72/918 (7%)
Query: 32 YLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIK 91
YLAKCVLK SVVL +GH+R P++ DVV GKETS+ELV++ EDGIVQSVCEQ +FGTIK
Sbjct: 19 YLAKCVLKSSVVLHAVYGHIRCPSTFDVVLGKETSLELVVVSEDGIVQSVCEQPLFGTIK 78
Query: 92 DLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSR 151
DL V+PWN+ + Q KDLLV++SDSGKLSFL F ++HRF V +H++ GN R
Sbjct: 79 DLRVLPWNESRRSPLPQTYEKDLLVLLSDSGKLSFLTFNVDLHRFLAVVHIHIAECGNLR 138
Query: 152 HQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSE-----SEVDTSA 206
+LGR+LA++S G +AV+A+EDR+ +F S+++G++I+DK++ YP E + S
Sbjct: 139 RELGRLLAIESRGRAVAVAAFEDRIAIFPTSIAAGNNIVDKRMIYPRELLSSTGLTEAST 198
Query: 207 SRIAQKNSISGTIWSMCFIS--TDPRQPSKEHNPIL--AIILNRRGALLNELLLVGWNIR 262
S + +K + GTIWSM F+ D P + + +L A++++R+GA NE++++ + +
Sbjct: 199 SGVEEKFTGWGTIWSMTFVGMPVDHLTPIVKSDSLLLLAVLVHRKGAASNEIVILKCDTK 258
Query: 263 EHAISVLSCFFEA------GPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYR 316
E I V + + + PL V++VP + GF + G+ LL+DLR P
Sbjct: 259 ERIIQVTARYDSSVIRPFISPLWISVLDVPAAPGFLLLSLPGELLLLDLRRP-------- 310
Query: 317 TSLNFLPPALEEQNFVDESCRVHDVDDEGLFN-VAACALLELRDY---DPMCIDSDSGNA 372
S + L Q +DE +EG N VAA ALLEL D S +
Sbjct: 311 -SSHLLAGVCSFQISLDE--------EEGSLNSVAASALLELLSRGQDDSSTKSPASSSN 361
Query: 373 KEPSK------------HVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGS--DGHKVH 418
EP++ + +WSWEP + ++ +DTGE + + F S D ++
Sbjct: 362 GEPTEVMDLNWDPSSLPTITAWSWEPYAEGQSRLALAMDTGEIHLARLIFESPDDVPRIE 421
Query: 419 LSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLK-EENGRLVYTSPIQNIAPILDMSVV 477
+ + YK PC +LW +G L+ FVEMGDG VL+ +NG+L++ S IQN+APILD S+
Sbjct: 422 VQQRQYKCSPCNVVLWTKGGLLAVFVEMGDGQVLQCSDNGKLIFKSLIQNVAPILDFSLA 481
Query: 478 DYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHS 537
DYH+EK+DQMFAC G EGSLR+IR+GIS+EKL T+PIYQG+TGT+T+RM DPYH+
Sbjct: 482 DYHNEKQDQMFACSGAGNEGSLRVIRNGISVEKLYTTSPIYQGVTGTYTMRMCCRDPYHA 541
Query: 538 FLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTM 597
F V+SFV+ETRVL VGLNF D+T++VGF+P TLACG + D +VQ+ V +C+PT
Sbjct: 542 FFVMSFVQETRVLSVGLNFVDITEAVGFQPCASTLACGTIEDYHVVQVCSKEVIVCVPTK 601
Query: 598 VAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEI 656
AH GI P C+SW P+ + +SLGAVA I+++ S P + +LG + + E+
Sbjct: 602 TAHPAGIDSPLPFCSSWKPPQGLVVSLGAVASKAIVLALSKPGLIVMLGSQRGANGALEL 661
Query: 657 YEMQHMRLQSELSCISIPQKHPERRKSSSP-----ISLVSNSSVPALPAGVIIGYTFVIG 711
Q L++ELSCISIP E +SSP + LV + P+GV +G V+G
Sbjct: 662 CMTQQCELKAELSCISIPD---EEDWTSSPLPPSIVGLVEGTPKSRNPSGVEVGRICVVG 718
Query: 712 THRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNG 771
TH PSVEVLS VP EGL LA G I L + +GT +SGC+P+ VRL D+ Y+LAGLRNG
Sbjct: 719 THEPSVEVLSIVPGEGLAPLAVGHISLVSCVGTTLSGCVPESVRLAQFDRLYILAGLRNG 778
Query: 772 MLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDEL----PINLQL 827
MLLR+EWP S ++ P + + +T + ENI GI + KD L P+ L L
Sbjct: 779 MLLRYEWPASS---TATLPDCTNLLST-SDWENI--GITQPNLGGDKDVLEDSSPVLLHL 832
Query: 828 IATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHS--LAYTSISFQPSTHATPVC 885
+A RR+G++PV L+ L SL AD+IALSDRPWLLQTARHS +A+TSISF S+HA PV
Sbjct: 833 VAVRRMGVSPVSLISLQASLSADVIALSDRPWLLQTARHSQRIAHTSISFPSSSHAAPVN 892
Query: 886 SVECPKGILFVAENSLNL 903
SV+CP GILFVA+ SL+L
Sbjct: 893 SVDCPNGILFVADCSLHL 910
>gi|302822731|ref|XP_002993022.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
gi|300139222|gb|EFJ05968.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
Length = 1277
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/898 (43%), Positives = 546/898 (60%), Gaps = 95/898 (10%)
Query: 21 SAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQS 80
++ A + YLAKC+ K SVV GH+RSP +VVFGKET++ELV++ EDG VQ
Sbjct: 6 ASAAEDDSEVLYLAKCLQKSSVVSHAVCGHIRSPLMLEVVFGKETALELVVLVEDGSVQP 65
Query: 81 VCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVA 140
VCEQ+VFG IKD+ ++PWN+ A SQ GKDLLV++SDSGKLSFL F ++HRF V+
Sbjct: 66 VCEQSVFGIIKDMKLLPWNEHRRAPYSQTYGKDLLVLLSDSGKLSFLTFSVDLHRFVAVS 125
Query: 141 QVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSES 200
Q+HLS+PG S +LG +LAVDS +AVSA ED + +F S+++G ++++K
Sbjct: 126 QIHLSHPGTSLRELGWLLAVDSRSRAVAVSAIEDLVAIFPTSVAAGENVVEKATA----- 180
Query: 201 EVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWN 260
+ + A+ GTIWSM F+++ P + H +LA+IL+R+GAL NEL ++ +
Sbjct: 181 ---GNVANDAESTYGWGTIWSMAFVAS----PEESHQLLLAVILHRKGALSNELQVLLCD 233
Query: 261 IREHAISVLSCFFEAGP-----LAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVY 315
E +I + + + +G L + VVE+P GF + R+G+ +L+D R +
Sbjct: 234 TNERSIHLGARYHPSGEPAIDFLTYGVVEMPAFPGFVLLLRLGEIVLVDAR------AIG 287
Query: 316 RTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRDY--------DPMCIDS 367
T+ PA N+ A +LL+ RD P
Sbjct: 288 TTTY----PA----------------------NLVAFSLLDFRDTVVDAEERPRPYYRAP 321
Query: 368 DSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIA-FGSDGHKVHLSECLYKG 426
D + +W WEP++ ++ F G ++ ++ + G + +C YK
Sbjct: 322 DDEYGARAKLFISAWCWEPDSKGQARLAFSTGKGGIDVVTLSPDAASGRPTLVRDCQYKC 381
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQ 486
C+ LLW F++A +EMGDG VLK E+G+L + S +QNIAPILD S+VDY+ EK+DQ
Sbjct: 382 SQCRLLLWTSDGFMTAMIEMGDGHVLKVEDGQLSFQSFVQNIAPILDFSLVDYYGEKQDQ 441
Query: 487 MFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEE 546
MFACCG EGS+RIIR+G S+EKL+ T P+YQG++G WT+R + DPYH+F ++SFVEE
Sbjct: 442 MFACCGGDEEGSVRIIRNGNSVEKLICTPPVYQGVSGIWTMRYRFKDPYHAFFLISFVEE 501
Query: 547 TRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPL 606
TRVL VGLNF D+TD+VGF V TLACGLV DG + Q+ + V+LC PT AH G+
Sbjct: 502 TRVLSVGLNFVDITDAVGFESQVNTLACGLVEDGWVAQVWRYEVKLCSPTKAAHPAGVSG 561
Query: 607 SYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQS 666
S P+ T+W IS+GAV + +I++ + P L +LG S +E+ E+Q +++
Sbjct: 562 SSPLSTTWRKPGYPISVGAVCRSRVILALARPGLLLMLGTTQTSAESFELVELQLCMMEA 621
Query: 667 ELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKE 726
E+SCISIPQ + L + ++V PAGV +G V+GTH+PSVE+LS VP +
Sbjct: 622 EISCISIPQGDISIPVPPTIAGLHAGNTV---PAGVDLGNVCVVGTHKPSVELLSIVPGD 678
Query: 727 GLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPS 786
A G + L ++GTA+SGCIPQDVRL L D+ Y+LAGLRNGMLLR+EWP D+ PS
Sbjct: 679 KFAPFAVGQVSLITSVGTAVSGCIPQDVRLALFDRLYILAGLRNGMLLRYEWPEDT--PS 736
Query: 787 SVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSD- 845
V SK P L LIA RR+G++PV LVPL
Sbjct: 737 LVL---------------------------SK---PAELHLIAARRLGVSPVCLVPLEAC 766
Query: 846 SLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+L AD+IALSDRPWLLQ A+ ++YTSISFQPSTHATPVCS +CPKGI+F+A+ SL+L
Sbjct: 767 ALRADIIALSDRPWLLQMAKR-ISYTSISFQPSTHATPVCSKDCPKGIIFLADCSLHL 823
>gi|302820387|ref|XP_002991861.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
gi|300140399|gb|EFJ07123.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
Length = 1292
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/905 (43%), Positives = 548/905 (60%), Gaps = 98/905 (10%)
Query: 21 SAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQS 80
++ A + YLAKC+ K SVV GH+RSP +VVFGKET++ELV++ EDG VQ
Sbjct: 6 ASAAEDDSEVLYLAKCLQKSSVVSYAVCGHIRSPLMLEVVFGKETALELVVLVEDGSVQP 65
Query: 81 VCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVA 140
VCEQ+VFG IKD+ ++PWN+ A SQ GKDLLV++SDSGKLSFL F ++HRF V+
Sbjct: 66 VCEQSVFGIIKDMKLLPWNEHRRAPYSQTYGKDLLVLLSDSGKLSFLTFSVDLHRFVAVS 125
Query: 141 QVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKK------- 193
Q+HLS+PG S +LG +LAVDS +AVSA ED + +F S+++G ++++K
Sbjct: 126 QIHLSHPGTSLRELGWLLAVDSRSRAVAVSAIEDLVAIFPTSVAAGENVVEKASVFFFLA 185
Query: 194 ICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNE 253
I YP+ V A + GTIWSM F+++ P + H +LA+IL+R+GAL NE
Sbjct: 186 ITYPAPGNVANDA----EATYGWGTIWSMAFVAS----PEESHQLLLAVILHRKGALSNE 237
Query: 254 LLLVGWNIREHAISVLSCFFEAGP-----LAHCVVEVPRSYGFAFVFRIGDALLMDLRDP 308
L ++ + E +I + + + +G L + VVE+P GF + R+G+ +L+D R
Sbjct: 238 LQVLLCDTNERSIHLGARYHPSGEPAIDFLTYGVVEMPAFPGFVLLLRLGEIVLVDAR-- 295
Query: 309 HNPSCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRDY-------- 360
+ T+ PA N+ A +LL+ RD
Sbjct: 296 ----AIGTTTY----PA----------------------NLVAFSLLDFRDTVGDPEERP 325
Query: 361 DPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIA-FGSDGHKVHL 419
P D + +W WEP++ ++ F G ++ + + G +
Sbjct: 326 RPYYRVPDDEYGTRAKLFISAWCWEPDSKGQARLAFSTGKGGIDVVTLRPDAASGRPTPV 385
Query: 420 SECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY 479
+C YK C+ LLW F++A +EMGDG VLK E+G+L + S +QNIAPILD S+VDY
Sbjct: 386 RDCQYKCSQCRLLLWTSDGFMTAMIEMGDGHVLKVEDGQLSFQSFVQNIAPILDFSLVDY 445
Query: 480 HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFL 539
+ EK+DQMFACCG EGS+RIIR+G S+EKL+ T P+YQG++G WT+R + DPYH+F
Sbjct: 446 YGEKQDQMFACCGGDEEGSVRIIRNGNSVEKLICTPPVYQGVSGIWTMRYRFKDPYHAFF 505
Query: 540 VLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVA 599
++SFVEETRVL VGLNF D+TD+VGF V TLACGLV DG + Q+ + V+LC PT A
Sbjct: 506 LISFVEETRVLSVGLNFVDITDAVGFESQVNTLACGLVEDGWVAQVWRYEVKLCSPTKAA 565
Query: 600 HSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEM 659
H G+ S P+ T+W IS+GAV + +I++ + P L +LG S +E+ E+
Sbjct: 566 HPAGVSGSNPLSTTWRKPGYPISVGAVCRSRVILALARPGLLLMLGATQTSDGSFELVEL 625
Query: 660 QHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEV 719
Q +++E+SCISIPQ + L + ++V PAG+ +G V+GTH+PSVE+
Sbjct: 626 QLCMMEAEISCISIPQGDISIPVPPTIAGLHAGNTV---PAGLDLGNVCVVGTHKPSVEL 682
Query: 720 LSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWP 779
LS VP + A G + L ++GTA+SGCIPQDVRL L D+ Y+LAGLRNGMLLR+EWP
Sbjct: 683 LSIVPGDKFAPFAVGQVSLITSVGTAVSGCIPQDVRLALFDRLYILAGLRNGMLLRYEWP 742
Query: 780 PDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVF 839
D+ PS V SK P L L+A RR+G++PV
Sbjct: 743 EDT--PSLVL---------------------------SK---PAQLHLVAARRLGVSPVC 770
Query: 840 LVPLSD-SLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAE 898
LVPL +L AD+IALSDRPWLLQ A+ ++YTSISFQPSTHATPVCS +CPKGI+F+A+
Sbjct: 771 LVPLEACALRADIIALSDRPWLLQMAKR-ISYTSISFQPSTHATPVCSKDCPKGIIFLAD 829
Query: 899 NSLNL 903
SL+L
Sbjct: 830 CSLHL 834
>gi|242047820|ref|XP_002461656.1| hypothetical protein SORBIDRAFT_02g006020 [Sorghum bicolor]
gi|241925033|gb|EER98177.1| hypothetical protein SORBIDRAFT_02g006020 [Sorghum bicolor]
Length = 315
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 139/276 (50%), Positives = 190/276 (68%), Gaps = 8/276 (2%)
Query: 31 HYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
HY+AK VL+GS VL VA G RSP S DVV KETS+ELV +G+DG++QS+CEQ +FG I
Sbjct: 42 HYIAKRVLRGSAVLHVAEGCFRSPDSADVVLAKETSLELVAVGDDGVLQSICEQDMFGII 101
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
KD+ V+ W+ + Q+ KDLLVV+SDSGKLS L FC+EMHRFF +A + LS PGN
Sbjct: 102 KDIGVLQWHSRHVGLIPQIEHKDLLVVLSDSGKLSLLYFCSEMHRFFAIANIELSKPGNL 161
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMS---SGSDII-DKKICYPSESEVDTSA 206
RH LGR+LA+D +AVS+YED+ L +S+S SG II +KK YP E+E D+
Sbjct: 162 RHHLGRILAIDRESNFVAVSSYEDKFALIHVSVSQSGSGRGIISEKKYFYPPENEEDSRI 221
Query: 207 SRIAQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAI 266
+ + SI GTIW+M FIS P+ +E+ P+LA+I+NR+G+ +N+L L G++ +
Sbjct: 222 IS-SSRTSIRGTIWTMRFISI-PQD--EEYYPVLAMIINRKGSDVNDLSLFGYDTSSCVV 277
Query: 267 SVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALL 302
+S + E GPLA + E+P +GFA + R+GDALL
Sbjct: 278 DHISSYSEIGPLALDISEIPEMFGFALLLRVGDALL 313
>gi|115471085|ref|NP_001059141.1| Os07g0203800 [Oryza sativa Japonica Group]
gi|113610677|dbj|BAF21055.1| Os07g0203800, partial [Oryza sativa Japonica Group]
Length = 281
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 157/242 (64%), Gaps = 15/242 (6%)
Query: 32 YLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIK 91
YLAK VL+GS VL VA G RSP DVV KE S+ELV+IGEDG++QS+CEQ FG IK
Sbjct: 51 YLAKRVLRGSAVLHVAQGCFRSPDCVDVVLCKENSLELVVIGEDGVLQSICEQTTFGIIK 110
Query: 92 DLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSR 151
D+ V+ W ++ GK++LV++SDSGKLS L FC+EMHRFF +A + LS PGN R
Sbjct: 111 DVGVLNWRCTHFGLMPKIEGKEILVILSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLR 170
Query: 152 HQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIA- 210
H+LGR+LA+D +AVSAYED +S +D K+ P+ E++ A I+
Sbjct: 171 HRLGRILAIDRESRFVAVSAYEDEFAFVRVS-------VDHKLHAPN-GEIEEDAKIIST 222
Query: 211 --QKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISV 268
+SI GT+WSMCFIST +E+ P++A+I+N RG+ +N+L L G + + I
Sbjct: 223 AYNTSSIHGTVWSMCFIST---CLDEEYYPVVAMIVN-RGSDVNDLALYGLDSHKRTIDR 278
Query: 269 LS 270
+S
Sbjct: 279 IS 280
>gi|115471083|ref|NP_001059140.1| Os07g0203700 [Oryza sativa Japonica Group]
gi|113610676|dbj|BAF21054.1| Os07g0203700, partial [Oryza sativa Japonica Group]
Length = 666
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 123/198 (62%), Gaps = 28/198 (14%)
Query: 709 VIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGL 768
VIGTH PSV ++S P E + LA G I + N +GT ISGCIP++VR V A +FY+LAGL
Sbjct: 28 VIGTHEPSVHIISLEPGEAFQQLAVGHISVNNALGTPISGCIPENVRFVAAARFYILAGL 87
Query: 769 RNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN---L 825
RNGMLLRFE G SF + P + L
Sbjct: 88 RNGMLLRFE-------------------------SQTSKGHCFPGSFYKESSTPCDDTSL 122
Query: 826 QLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVC 885
LIA RRIGITPV LVPL D +AD+I L DRPWLLQ+ARHSLAY+SISF P++H TPV
Sbjct: 123 MLIAVRRIGITPVVLVPLHDRANADIIVLGDRPWLLQSARHSLAYSSISFLPASHVTPVS 182
Query: 886 SVECPKGILFVAENSLNL 903
S +CP G+LFV+EN L+L
Sbjct: 183 STDCPSGLLFVSENCLHL 200
>gi|18410222|ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
gi|18410226|ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana]
gi|7019653|emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana]
gi|7019655|emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana]
gi|332645831|gb|AEE79352.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
gi|332645833|gb|AEE79354.1| putative splicing factor [Arabidopsis thaliana]
Length = 1214
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 192/448 (42%), Gaps = 84/448 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++ P++DM V++ +E+ Q+F+ CG P SLRI+R G+++ ++ +
Sbjct: 393 LVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPG 452
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
Q + WTV+ VSD + +++V+SF T VL +G +V DS GF +LA L+
Sbjct: 453 QP-SAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDS-GFLDTTPSLAVSLIG 510
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D L+Q+H N +R + G I W P SI ++++ S
Sbjct: 511 DDSLMQVHPNGIR-----HIREDGRI-------NEWRTPGKRSIVKVGYNRLQVVIALSG 558
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ + + E +EM +++C+ I PE RK S ++
Sbjct: 559 GELIYFEADMTGQLMEVEKHEM-----SGDVACLDIAPV-PEGRKRSRFLA--------- 603
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI--VLTNTMGTAISGCIPQDVR 755
+G++ +V +LS P + L++L+ S+ + + + I D
Sbjct: 604 ------------VGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDG 651
Query: 756 LVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSF 815
++ +GL+NG+L FR ++ +G + S
Sbjct: 652 ADHPANLFLNSGLQNGVL-------------------------FRTVVDMVTGQLSDSR- 685
Query: 816 ESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISF 875
+R +G+ P L +S + M+ LS RPWL R T +S+
Sbjct: 686 --------------SRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSY 731
Query: 876 QPSTHATPVCSVECPKGILFVAENSLNL 903
+ A P S +C +G++ VA ++L +
Sbjct: 732 ETLEFAAPFSSDQCAEGVVSVAGDALRI 759
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 32 YLAKCVLKGSVVLQVA-HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
YL L+ + + A +G+ + ++ + ++L+ E+G +Q++ VFG I
Sbjct: 2 YLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAI 61
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
+ LA +F +Q KD +VV SDSG++ L + E + F V Q G
Sbjct: 62 RSLA------QFRLTGAQ---KDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCR 112
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
R G+ +AVD G + + A E + ++ L+ +
Sbjct: 113 RIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDT 147
>gi|223647430|gb|ACN10473.1| Splicing factor 3B subunit 3 [Salmo salar]
Length = 1217
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 182/901 (20%), Positives = 339/901 (37%), Gaps = 182/901 (20%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVP 97
+ + + HG+ ++V + IEL+ + G V ++ VFG I+ L
Sbjct: 10 RATGITHAIHGNFSGTKMQEIVVSRGKIIELLRPDANTGKVHTLLTMEVFGIIRSLMAFR 69
Query: 98 WNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRM 157
KD +VV SDSG++ L + + F + Q G R G+
Sbjct: 70 LTGG---------TKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF 120
Query: 158 LAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISG 217
LAVD G + + A E + ++ L+ + + ++ S E + + + +
Sbjct: 121 LAVDPKGRAVMIGAIEKQKLVYILNRDAAA-----RLTISSPLEAHKANTLVYHVVGVDV 175
Query: 218 TIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGP 277
+ F + +++P N + L L +G N
Sbjct: 176 GFENPMFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLN----------------- 218
Query: 278 LAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDE--- 334
H V R Y A G+ L+ PS V S N++ +NF D+
Sbjct: 219 --HVV----RKYSEALE-EHGNFLITVPGGSDGPSGVLICSENYIT----YKNFGDQPDI 267
Query: 335 SC----RVHDVDDEGLFNVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSWSWEPETDK 390
C R +D+DD + C+ A +K + + + E
Sbjct: 268 RCPIPRRRNDLDDPERGMIFVCS------------------ATHKTKSMFFFLAQTEQGD 309
Query: 391 IPKMVFCVDTGEFFMIEIAFGS-DGHKVHLSECLYKGPPCKALLWVEGRF----LSAFVE 445
I K+ ++T E + EI D V S C+ K L+V F L
Sbjct: 310 IFKVT--LETDEEMVTEIRMKYFDTIPVATSMCVLK----TGFLFVSSEFGNHYLYQIAH 363
Query: 446 MGD---------GMVLKEENGRLVYTSPIQN---------IAPILDMSVVDYHDEKRDQM 487
+GD M L+E + P++N ++PI+ + D +E Q+
Sbjct: 364 LGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDTPQL 423
Query: 488 FACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEET 547
+ CG P+ +LR++R G+ + ++ + + WTVR + D + +++++SFV T
Sbjct: 424 YVACGRGPKSTLRVLRHGLEVSEMA-VSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNAT 482
Query: 548 RVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLS 607
VL +G +VTDS GF TL+C L+ + LVQ++ + +R I
Sbjct: 483 LVLSIGETVEEVTDS-GFLGTTPTLSCSLLGEDALVQVYPDGIR-----------HIRAD 530
Query: 608 YPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSE 667
V P +I AV ++++ + ++ S ++ Y + + ++
Sbjct: 531 KRVNEWKTPGKKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEY----TERKEMSAD 586
Query: 668 LSCISIPQKHP-ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKE 726
+ C+S+ P E+R + LV N +V ++S P +
Sbjct: 587 VVCMSLANVPPGEQRSRFLAVGLVDN-----------------------TVRIISLDPSD 623
Query: 727 GLRVLASGSI-VLTNTMGTAISGCIPQDVRLVLADQ---FYVLAGLRNGMLLRFEWPPDS 782
L+ L+ ++ ++ G + ++ L + Y+ GL+NG+LLR
Sbjct: 624 CLQPLSMQALPAQPESLCIVEMGGVEKEDELGVKGTVGFLYLNIGLQNGVLLR------- 676
Query: 783 NIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVP 842
+ P++ +T TR +G PV L
Sbjct: 677 -------TVLDPVTGDLSDTR--------------------------TRYLGSRPVKLFR 703
Query: 843 LSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLN 902
+ ++A+S R WL + + T +S++ +A+ S +CP+GI+ ++ N+L
Sbjct: 704 VRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLR 763
Query: 903 L 903
+
Sbjct: 764 I 764
>gi|449435512|ref|XP_004135539.1| PREDICTED: DNA damage-binding protein 1-like [Cucumis sativus]
Length = 1093
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 185/440 (42%), Gaps = 90/440 (20%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLR++R+GI + + + + QGI G W+
Sbjct: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRVVRNGIGINE--QASVELQGIKGMWS 404
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
+R DP+ +FLV+SF+ ETR+L + L + + T+ GF V TL C LVQ+
Sbjct: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFNSQVQTLFCHDALFNQLVQV 464
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
++VRL T + + W P + SI++ + ++++T +
Sbjct: 465 TSSSVRLVSST----------TRELLNEWNAPSNYSINVATANASQVLLATGGGVLV--- 511
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + + E +H++L+ E+SC+ I +PI N + L A +
Sbjct: 512 ---HLEICDGLLVEKKHIQLEHEISCLDI-----------NPIG--DNPNCSQLAA---V 552
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQF-Y 763
G I S+ L+ + KE L G I IP+ V L + Y
Sbjct: 553 GMWTDISVRIFSLPDLNLLTKEQL----GGEI-------------IPRSVLLCTFEGISY 595
Query: 764 VLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPI 823
+L L +G LL F +SN ++S E D +
Sbjct: 596 LLCALGDGHLLNFILNTNSN----------------------------SNSCELMDRKKV 627
Query: 824 NLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATP 883
+L G P+ L S + A SDRP ++ ++ L Y++++ + +H P
Sbjct: 628 SL--------GTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 679
Query: 884 VCSVECPKGILFVAENSLNL 903
S P + E L +
Sbjct: 680 FNSAAFPDSLAIAKEGELTI 699
>gi|55976392|sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein 1; AltName:
Full=UV-damaged DNA-binding protein 1
gi|49484911|gb|AAT66742.1| UV-damaged DNA binding protein 1 [Solanum cheesmaniae]
Length = 1095
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 179/439 (40%), Gaps = 92/439 (20%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLRI+R+GI + + + + QGI G W+
Sbjct: 352 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 409
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
+R DPY +FLV+SF+ ETRVL + L + + T+ GF V TL C LVQ+
Sbjct: 410 LRSATDDPYDTFLVVSFISETRVLAMNLEDELEETEIEGFNSQVQTLFCHDAVYNQLVQV 469
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T S + WF P S+++ ++++T ++
Sbjct: 470 TSNSVRLVSST----------SRDLKNEWFAPVGYSVNVATANATQVLLATGGGHLVY-- 517
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + + E+++ +L ++SC+ I +PI N S A +
Sbjct: 518 ----LEIGDGVLNEVKYAKLDYDISCLDI-----------NPIGENPNYSNIA-----AV 557
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYV 764
G I S+ L+ + KE L G I+ + + + G Y+
Sbjct: 558 GMWTDISVRIYSLPDLNLITKEQL----GGEIIPRSVLMCSFEGI------------SYL 601
Query: 765 LAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN 824
L L +G LL F + + S+ E D ++
Sbjct: 602 LCALGDGHLLNF--------------------------------VLSMSTGELTDRKKVS 629
Query: 825 LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPV 884
L G P+ L S + A SDRP ++ ++ L Y++++ + +H P
Sbjct: 630 L--------GTQPITLRTFSSKDTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 681
Query: 885 CSVECPKGILFVAENSLNL 903
P + E L +
Sbjct: 682 NVAAFPDSLAIAKEGELTI 700
>gi|350537001|ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycopersicum]
gi|350539125|ref|NP_001233864.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
gi|55976440|sp|Q6QNU4.1|DDB1_SOLLC RecName: Full=DNA damage-binding protein 1; AltName: Full=High
pigmentation protein 1; AltName: Full=UV-damaged
DNA-binding protein 1
gi|38455768|gb|AAR20885.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
gi|42602165|gb|AAS21683.1| UV-damaged DNA binding protein 1 [Solanum lycopersicum]
Length = 1090
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 179/439 (40%), Gaps = 92/439 (20%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLRI+R+GI + + + + QGI G W+
Sbjct: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
+R DPY +FLV+SF+ ETRVL + L + + T+ GF V TL C LVQ+
Sbjct: 405 LRSATDDPYDTFLVVSFISETRVLAMNLEDELEETEIEGFNSQVQTLFCHDAVYNQLVQV 464
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T S + WF P S+++ ++++T ++
Sbjct: 465 TSNSVRLVSST----------SRDLKNEWFAPVGYSVNVATANATQVLLATGGGHLVY-- 512
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + + E+++ +L ++SC+ I +PI N S A +
Sbjct: 513 ----LEIGDGVLNEVKYAKLDYDISCLDI-----------NPIGENPNYSNIA-----AV 552
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYV 764
G I S+ L+ + KE L G I+ + + + G Y+
Sbjct: 553 GMWTDISVRIYSLPDLNLITKEQL----GGEIIPRSVLMCSFEGI------------SYL 596
Query: 765 LAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN 824
L L +G LL F + + S+ E D ++
Sbjct: 597 LCALGDGHLLNF--------------------------------VLSMSTGELTDRKKVS 624
Query: 825 LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPV 884
L G P+ L S + A SDRP ++ ++ L Y++++ + +H P
Sbjct: 625 L--------GTQPITLRTFSSKDTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 676
Query: 885 CSVECPKGILFVAENSLNL 903
P + E L +
Sbjct: 677 NVAAFPDSLAIAKEGELTI 695
>gi|356512636|ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1a-like isoform 1 [Glycine
max]
Length = 1089
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 196/478 (41%), Gaps = 98/478 (20%)
Query: 434 WVEGRFLSAFVEMGDGMVLK---EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQM 487
+++ F+ GD ++K + + + Y ++ N+ PI+D VVD + + Q+
Sbjct: 308 YLDNAFVYIGSSYGDSQLIKLNLQPDAKGSYVEGLERYVNLGPIVDFCVVDLERQGQGQV 367
Query: 488 FACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEET 547
C G +GSLR++R+GI + + + + QGI G W++R DP+ +FLV+SF+ ET
Sbjct: 368 VTCSGAYKDGSLRVVRNGIGINE--QASVELQGIKGMWSLRSSTDDPFDTFLVVSFISET 425
Query: 548 RVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPL 606
R+L + L + + T+ GF V TL C LVQ+ ++VRL T
Sbjct: 426 RILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSST---------- 475
Query: 607 SYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQ 665
+ + W P S+++ ++++T ++ L + + E++H +L+
Sbjct: 476 TRELRNEWHAPSGYSVNVATANATQVLLATGGGHLVY------LEIGDGILQEVKHAQLE 529
Query: 666 SELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPK 725
E+SC+ I +PI N S A +G I S+ LS + K
Sbjct: 530 YEISCLDI-----------NPIGENPNHSHLA-----AVGMWTDISVRIFSLPDLSLITK 573
Query: 726 EGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIP 785
E L G I+ + + A G Y+L L +G LL F
Sbjct: 574 EQL----GGEIIPRSVLLCAFEGI------------SYLLCALGDGHLLNF--------- 608
Query: 786 SSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSD 845
+ TS+ E D ++L G P+ L S
Sbjct: 609 -----------------------MLNTSTGELADRKKVSL--------GTQPITLRTFSS 637
Query: 846 SLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ A SDRP ++ ++ L Y++++ + +H P S P + E L +
Sbjct: 638 KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
>gi|302769568|ref|XP_002968203.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
gi|300163847|gb|EFJ30457.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
Length = 1089
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 214/517 (41%), Gaps = 108/517 (20%)
Query: 400 TGEFFMIEIAFGSD---GHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLK--- 453
TG ++ I D G KV E L + +L +++ + GD ++K
Sbjct: 274 TGSLHLLVITHERDRVLGLKV---ELLGETSAASSLSYLDNGVVYVGSSYGDSQLIKLNA 330
Query: 454 EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEK 510
+ + R Y ++ N+ PI+D+ VVD + + Q+ C G +GSLRI+R+GI + +
Sbjct: 331 QVDSRNSYVEVLESFVNLGPIVDLCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 390
Query: 511 LLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFT-DVTDSVGFRPDV 569
+ + QGI G W++R D + FLV+SF+ ETR+L + ++ + T+ GF +
Sbjct: 391 --QASAELQGIKGMWSLRATSKDVFDIFLVVSFISETRILAMNMDDELEETEIEGFDSEA 448
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAH 628
TL C ++Q+ ++RL T S T W P V+I++
Sbjct: 449 QTLFCHNAIHDQIIQVTSTSLRLVDAT----------SRRQLTEWRTPSAVAINVATANA 498
Query: 629 NMIIVSTSNPCFLFI-LGVRSLSVSHYEIYEMQHMRLQSELSCISI-PQKHPERRKSSSP 686
+ ++++T ++I +G SL+ E++H++LQ+E+SC+ I P R + +
Sbjct: 499 SQVLLATGGGNLVYIEIGRGSLT-------EVKHVQLQNEISCLDINPIGTDPDRSNIAA 551
Query: 687 ISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAI 746
+ + ++ SV P++EVL+ KE L G I+ + + A
Sbjct: 552 VGMWTDISVQVFSL--------------PNLEVLA---KESL----GGEIIPRSVLICAF 590
Query: 747 SGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIR 806
G Y+L L +G L F
Sbjct: 591 EGV------------SYLLCALGDGHLFNF------------------------------ 608
Query: 807 SGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARH 866
+ TS+ + D I+L G P+ L + A SDRP ++ ++
Sbjct: 609 --LIDTSNGQLSDRKKISL--------GTQPIMLRTFRSKNATHVFAASDRPTVIYSSNK 658
Query: 867 SLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
L Y++++ + H P S P + E L +
Sbjct: 659 KLLYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTI 695
>gi|356525403|ref|XP_003531314.1| PREDICTED: DNA damage-binding protein 1-like isoform 2 [Glycine
max]
Length = 1068
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 196/478 (41%), Gaps = 98/478 (20%)
Query: 434 WVEGRFLSAFVEMGDGMVLK---EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQM 487
+++ F+ GD ++K + + + Y ++ N+ PI+D VVD + + Q+
Sbjct: 287 YLDNAFVYVGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQV 346
Query: 488 FACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEET 547
C G +GSLR++R+GI + + + + QGI G W++R DP+ +FLV+SF+ ET
Sbjct: 347 VTCSGAYKDGSLRVVRNGIGINE--QASVELQGIKGMWSLRSSTDDPFDTFLVVSFISET 404
Query: 548 RVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPL 606
R+L + L + + T+ GF V TL C LVQ+ ++VRL T
Sbjct: 405 RILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSST---------- 454
Query: 607 SYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQ 665
+ + W P S+++ ++++T ++ L + + E++H +L+
Sbjct: 455 TRDLRNEWHAPSGYSVNVATANATQVLLATGGGHLVY------LEIGDGILQEVKHAQLE 508
Query: 666 SELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPK 725
E+SC+ I +PI N S A +G I S+ LS + K
Sbjct: 509 YEISCLDI-----------NPIGENPNHSNLA-----AVGMWTDISVRIFSLPDLSLITK 552
Query: 726 EGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIP 785
E L G I+ + + A G Y+L L +G LL F
Sbjct: 553 EQL----GGEIIPRSVLLCAFEGI------------SYLLCALGDGHLLNF--------- 587
Query: 786 SSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSD 845
+ TS+ E D ++L G P+ L S
Sbjct: 588 -----------------------MLNTSTGELTDRKKVSL--------GTQPITLRTFSS 616
Query: 846 SLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ A SDRP ++ ++ L Y++++ + +H P S P + E L +
Sbjct: 617 KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 674
>gi|12082087|dbj|BAB20761.1| UV-damaged DNA binding protein [Oryza sativa Japonica Group]
Length = 1090
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 187/440 (42%), Gaps = 94/440 (21%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLR++R+GI + + + + QGI G W+
Sbjct: 348 NLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLRVVRNGIGINE--QASVELQGIKGLWS 405
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ +DPY +LV+SF+ ETR L + + + + T+ GF TL C + LL+Q+
Sbjct: 406 LKSSFNDPYDMYLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQV 465
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T S + W PE S+++ + + ++++T ++
Sbjct: 466 TANSVRLVSCT----------SRELVDQWNAPEGFSVNVASANASQVLLATGGGHLVY-- 513
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + ++ E++H++L+ E+SC+ + +PI N +L A +
Sbjct: 514 ----LEIKDSKLVEVKHIQLEHEISCVDL-----------NPIG--ENPQYSSLAA---V 553
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRL-VLADQFY 763
G I SV +LSF E +R +G I +P+ V L L Y
Sbjct: 554 GMWTDI-----SVRILSFPDLELIR---------KENLGGEI---VPRSVLLCTLEGVSY 596
Query: 764 VLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPI 823
+L L +G L F + S+ E D +
Sbjct: 597 LLCALGDGHLFSF--------------------------------LLNASTGELTDRKKV 624
Query: 824 NLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATP 883
+L G P+ L S + A SDRP ++ ++ L Y++++ + H P
Sbjct: 625 SL--------GTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCP 676
Query: 884 VCSVECPKGILFVAENSLNL 903
+ P + E L++
Sbjct: 677 FNTAAIPDSLAIAKEGELSI 696
>gi|302788810|ref|XP_002976174.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
gi|300156450|gb|EFJ23079.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
Length = 1089
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 214/517 (41%), Gaps = 108/517 (20%)
Query: 400 TGEFFMIEIAFGSD---GHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLK--- 453
TG ++ I D G KV E L + +L +++ + GD ++K
Sbjct: 274 TGSLHLLVITHERDRVLGLKV---ELLGETSAASSLSYLDNGVVYVGSSYGDSQLIKLNA 330
Query: 454 EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEK 510
+ + R Y ++ N+ PI+D+ VVD + + Q+ C G +GSLRI+R+GI + +
Sbjct: 331 QVDSRNSYVEVLESFVNLGPIVDLCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 390
Query: 511 LLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFT-DVTDSVGFRPDV 569
+ + QGI G W++R D + FLV+SF+ ETR+L + ++ + T+ GF +
Sbjct: 391 --QASAELQGIKGMWSLRATSKDVFDIFLVVSFISETRILAMNMDDELEETEIEGFDSEA 448
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAH 628
TL C ++Q+ ++RL T S T W P V+I++
Sbjct: 449 QTLFCHNAIHDQIIQVTSTSLRLVDAT----------SRRQLTEWRTPSGVAINVATANA 498
Query: 629 NMIIVSTSNPCFLFI-LGVRSLSVSHYEIYEMQHMRLQSELSCISI-PQKHPERRKSSSP 686
+ ++++T ++I +G SL+ E++H++LQ+E+SC+ I P R + +
Sbjct: 499 SQVLLATGGGNLVYIEIGRGSLT-------EVKHVQLQNEISCLDINPIGTDPDRSNIAA 551
Query: 687 ISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAI 746
+ + ++ SV P++EVL+ KE L G I+ + + A
Sbjct: 552 VGMWTDISVQVFSL--------------PNLEVLA---KESL----GGEIIPRSVLICAF 590
Query: 747 SGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIR 806
G Y+L L +G L F
Sbjct: 591 EGV------------SYLLCALGDGHLFNF------------------------------ 608
Query: 807 SGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARH 866
+ TS+ + D I+L G P+ L + A SDRP ++ ++
Sbjct: 609 --LIDTSTGQLSDRKKISL--------GTQPIMLRTFRSKNATHVFAASDRPTVIYSSNK 658
Query: 867 SLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
L Y++++ + H P S P + E L +
Sbjct: 659 KLLYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTI 695
>gi|356525401|ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Glycine
max]
Length = 1089
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 196/478 (41%), Gaps = 98/478 (20%)
Query: 434 WVEGRFLSAFVEMGDGMVLK---EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQM 487
+++ F+ GD ++K + + + Y ++ N+ PI+D VVD + + Q+
Sbjct: 308 YLDNAFVYVGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQV 367
Query: 488 FACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEET 547
C G +GSLR++R+GI + + + + QGI G W++R DP+ +FLV+SF+ ET
Sbjct: 368 VTCSGAYKDGSLRVVRNGIGINE--QASVELQGIKGMWSLRSSTDDPFDTFLVVSFISET 425
Query: 548 RVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPL 606
R+L + L + + T+ GF V TL C LVQ+ ++VRL T
Sbjct: 426 RILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSST---------- 475
Query: 607 SYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQ 665
+ + W P S+++ ++++T ++ L + + E++H +L+
Sbjct: 476 TRDLRNEWHAPSGYSVNVATANATQVLLATGGGHLVY------LEIGDGILQEVKHAQLE 529
Query: 666 SELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPK 725
E+SC+ I +PI N S A +G I S+ LS + K
Sbjct: 530 YEISCLDI-----------NPIGENPNHSNLA-----AVGMWTDISVRIFSLPDLSLITK 573
Query: 726 EGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIP 785
E L G I+ + + A G Y+L L +G LL F
Sbjct: 574 EQL----GGEIIPRSVLLCAFEGI------------SYLLCALGDGHLLNF--------- 608
Query: 786 SSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSD 845
+ TS+ E D ++L G P+ L S
Sbjct: 609 -----------------------MLNTSTGELTDRKKVSL--------GTQPITLRTFSS 637
Query: 846 SLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ A SDRP ++ ++ L Y++++ + +H P S P + E L +
Sbjct: 638 KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 695
>gi|356512638|ref|XP_003525025.1| PREDICTED: DNA damage-binding protein 1a-like isoform 2 [Glycine
max]
Length = 1068
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 196/478 (41%), Gaps = 98/478 (20%)
Query: 434 WVEGRFLSAFVEMGDGMVLK---EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQM 487
+++ F+ GD ++K + + + Y ++ N+ PI+D VVD + + Q+
Sbjct: 287 YLDNAFVYIGSSYGDSQLIKLNLQPDAKGSYVEGLERYVNLGPIVDFCVVDLERQGQGQV 346
Query: 488 FACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEET 547
C G +GSLR++R+GI + + + + QGI G W++R DP+ +FLV+SF+ ET
Sbjct: 347 VTCSGAYKDGSLRVVRNGIGINE--QASVELQGIKGMWSLRSSTDDPFDTFLVVSFISET 404
Query: 548 RVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPL 606
R+L + L + + T+ GF V TL C LVQ+ ++VRL T
Sbjct: 405 RILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSST---------- 454
Query: 607 SYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQ 665
+ + W P S+++ ++++T ++ L + + E++H +L+
Sbjct: 455 TRELRNEWHAPSGYSVNVATANATQVLLATGGGHLVY------LEIGDGILQEVKHAQLE 508
Query: 666 SELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPK 725
E+SC+ I +PI N S A +G I S+ LS + K
Sbjct: 509 YEISCLDI-----------NPIGENPNHSHLA-----AVGMWTDISVRIFSLPDLSLITK 552
Query: 726 EGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIP 785
E L G I+ + + A G Y+L L +G LL F
Sbjct: 553 EQL----GGEIIPRSVLLCAFEGI------------SYLLCALGDGHLLNF--------- 587
Query: 786 SSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSD 845
+ TS+ E D ++L G P+ L S
Sbjct: 588 -----------------------MLNTSTGELADRKKVSL--------GTQPITLRTFSS 616
Query: 846 SLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ A SDRP ++ ++ L Y++++ + +H P S P + E L +
Sbjct: 617 KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 674
>gi|115465791|ref|NP_001056495.1| Os05g0592400 [Oryza sativa Japonica Group]
gi|48475231|gb|AAT44300.1| putative DNA damage binding protein 1 [Oryza sativa Japonica Group]
gi|113580046|dbj|BAF18409.1| Os05g0592400 [Oryza sativa Japonica Group]
gi|215694552|dbj|BAG89545.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632766|gb|EEE64898.1| hypothetical protein OsJ_19757 [Oryza sativa Japonica Group]
Length = 1090
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 184/440 (41%), Gaps = 94/440 (21%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLR++R+GI + + + + QGI G W+
Sbjct: 348 NLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLRVVRNGIGINE--QASVELQGIKGLWS 405
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ +DPY +LV+SF+ ETR L + + + + T+ GF TL C + LL+Q+
Sbjct: 406 LKSSFNDPYDMYLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQV 465
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T S + W PE S+++ + + ++++T ++
Sbjct: 466 TANSVRLVSCT----------SRELVDQWNAPEGFSVNVASANASQVLLATGGGHLVY-- 513
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + ++ E++H++L+ E+SC+ + +PI N +L A +
Sbjct: 514 ----LEIKDSKLVEVKHIQLEHEISCVDL-----------NPIG--ENPQYSSLAA---V 553
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRL-VLADQFY 763
G I S+ L + KE L G IV P+ V L L Y
Sbjct: 554 GMWTDISVRILSLPDLELIRKENL----GGEIV-------------PRSVLLCTLEGVSY 596
Query: 764 VLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPI 823
+L L +G L F + S+ E D +
Sbjct: 597 LLCALGDGHLFSF--------------------------------LLNASTGELTDRKKV 624
Query: 824 NLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATP 883
+L G P+ L S + A SDRP ++ ++ L Y++++ + H P
Sbjct: 625 SL--------GTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCP 676
Query: 884 VCSVECPKGILFVAENSLNL 903
+ P + E L++
Sbjct: 677 FNTAAIPDSLAIAKEGELSI 696
>gi|218197365|gb|EEC79792.1| hypothetical protein OsI_21216 [Oryza sativa Indica Group]
Length = 1089
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 184/440 (41%), Gaps = 94/440 (21%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLR++R+GI + + + + QGI G W+
Sbjct: 348 NLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLRVVRNGIGINE--QASVELQGIKGLWS 405
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ +DPY +LV+SF+ ETR L + + + + T+ GF TL C + LL+Q+
Sbjct: 406 LKSSFNDPYDMYLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQV 465
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T S + W PE S+++ + + ++++T ++
Sbjct: 466 TANSVRLVSCT----------SRELVDQWNAPEGFSVNVASANASQVLLATGGGHLVY-- 513
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + ++ E++H++L+ E+SC+ + +PI N +L A +
Sbjct: 514 ----LEIKDSKLVEVKHIQLEHEISCVDL-----------NPIG--ENPQYSSLAA---V 553
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRL-VLADQFY 763
G I S+ L + KE L G IV P+ V L L Y
Sbjct: 554 GMWTDISVRILSLPDLELIRKENL----GGEIV-------------PRSVLLCTLEGVSY 596
Query: 764 VLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPI 823
+L L +G L F + S+ E D +
Sbjct: 597 LLCALGDGHLFSF--------------------------------LLNASTGELTDRKKV 624
Query: 824 NLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATP 883
+L G P+ L S + A SDRP ++ ++ L Y++++ + H P
Sbjct: 625 SL--------GTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCP 676
Query: 884 VCSVECPKGILFVAENSLNL 903
+ P + E L++
Sbjct: 677 FNTAAIPDSLAIAKEGELSI 696
>gi|440792421|gb|ELR13643.1| splicing factor 3b subunit 3, putative [Acanthamoeba castellanii
str. Neff]
Length = 1227
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 183/454 (40%), Gaps = 101/454 (22%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ I+++API+D V D E+ Q CG P SLR+++ G+++ ++ +P+
Sbjct: 388 LIAIDEIESLAPIMDFKVADMVKEETKQFLTLCGRGPRSSLRLLKHGLAVAEMA-DSPLP 446
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+TVR V+D Y S++++SF+ T VL +G N +V D+ GF + TL GLV
Sbjct: 447 GNPNNIFTVRKNVADEYDSYIIVSFLNATLVLSIGDNVEEVKDA-GFNENASTLNVGLVG 505
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQ+ +R S T W P +I A+ + ++++ +
Sbjct: 506 DDSLVQVFPTGIRFIR------------SDKRITEWPTPARRTIVRSAINNKQVVIALTG 553
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
L+ L ++ + E+ + +++CI I +PI
Sbjct: 554 GELLYF----ELDITG-SLVEVGRKDMGRDIACIDI-----------API---------- 587
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI--------VLTNTMGTAISGC 749
P G + +G + +V VLS P++ LA ++ ++ GT S
Sbjct: 588 -PEGRLRARFLAVGDYENTVRVLSLDPEDVFSSLAVQALPAPPESLCIVKMKGGTDSS-- 644
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
A ++ GL NG+L R + ++ +T
Sbjct: 645 ---------AGTLFLNIGLTNGVLQR--------------TVLDKVTGELSDTR------ 675
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
TR +G PV L+ L M+AL+ R WL + L
Sbjct: 676 --------------------TRFLGSRPVRLLKLRVGDQPAMLALTSRAWLCYNYQLHLH 715
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S+ +A+ CS CP+G++ N+L +
Sbjct: 716 LTPLSYPALDYASNFCSERCPEGMVATIGNALRI 749
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 30 IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGE-DGIVQSVCEQAVFG 88
+H + + + + G+ +P + ++V + +EL+ + +G VQ+V VFG
Sbjct: 1 MHIYNLTLQRATAITHAIFGNFSAPKAQEIVVARGKVLELLRPNDFNGKVQTVLSVEVFG 60
Query: 89 TIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
TI+ ++VP+ + +D ++V SDSG++ L + NE + F + Q G
Sbjct: 61 TIR--SIVPFRLTGDT-------RDYIIVGSDSGRIVILQYNNERNTFDKIHQETFGKSG 111
Query: 149 NSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGS 187
R G+ LAVD G + + A E + ++ L+ S +
Sbjct: 112 CRRIVPGQYLAVDPKGRAVMIGAVEKQKLVYILNRDSAA 150
>gi|357135348|ref|XP_003569272.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
distachyon]
Length = 1074
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 183/439 (41%), Gaps = 93/439 (21%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N PI+D VVD + Q+ C G +GS+R +R+G+ + + + +G+ G W+
Sbjct: 345 NTGPIVDFCVVDTERRGQGQVITCSGAYKDGSIRAVRNGVVITD--QASVELRGMKGLWS 402
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ ++DPY +FLV++F+ ET L + + N + D GF + TLACG L+Q+
Sbjct: 403 MKSSLNDPYDTFLVVTFINETHFLAMNMENELEEVDIKGFDSETQTLACGSAIHNQLIQV 462
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
+VRL +S + WF P S+++ A N ++++T N C L L
Sbjct: 463 TSRSVRLVS----------SVSLELLDQWFAPARFSVNVAAANANQVLLATGN-CHLVYL 511
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
+ S +I ++H++L+ E+SC+ I +PI N +L A +
Sbjct: 512 EITS-----SKIVPVKHIQLEHEISCLDI-----------NPIG--ENPQYSSLAA---V 550
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYV 764
G I S+ L + KE L + S++L C + V Y+
Sbjct: 551 GMWTDISVRIFSLPGLKLIRKEHLGEVVPRSVLL----------CTIEAVS-------YL 593
Query: 765 LAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN 824
GL +G L F + +S+ E D ++
Sbjct: 594 FCGLGDGHLFSF--------------------------------VLNSSTCELSDRRRVS 621
Query: 825 LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPV 884
L G P+ L S + A SDRP ++ ++ L Y+ + + H P
Sbjct: 622 L--------GAQPISLHIFSSQNRTHVFAASDRPAVIYSSDQKLLYSYANLKEVNHVCPF 673
Query: 885 CSVECPKGILFVAENSLNL 903
+ P+ I+ E+ L++
Sbjct: 674 NTAVFPESIVLAKESELSI 692
>gi|255081708|ref|XP_002508076.1| predicted protein [Micromonas sp. RCC299]
gi|226523352|gb|ACO69334.1| predicted protein [Micromonas sp. RCC299]
Length = 1199
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 177/443 (39%), Gaps = 95/443 (21%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
++++ P+LDM + E+ Q++A CG P +LR++R G++L ++ +P+
Sbjct: 402 VESLCPVLDMQCHNLVAEETPQLYALCGTGPRSTLRVLRQGVALSEMA-VSPLPGNPNAV 460
Query: 525 WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
+TVR SD + +++V+SF T VL +G +V+DS GF V TL+ L+ D L+Q
Sbjct: 461 FTVRKSASDEFDAYIVVSFTNATLVLSIGETVEEVSDS-GFLGTVPTLSASLLGDDSLLQ 519
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
+H +R + P V + A +II + F L
Sbjct: 520 VHPGGLRHIRADKRINEWRTPGRKTV----------TRVTTNARQVIIALSGGELIYFEL 569
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
++ E++ + +++C+ I P+ P G +
Sbjct: 570 DQTG------QLMEVEKLETSGDVACLDI-----------GPV-----------PEGHLR 601
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLAD---Q 761
+G+ +V +LS ++ L+ TMG P + ++ D
Sbjct: 602 NRFLAVGSFDSTVRILSLGAEDCLQ-----------TMGVQALAAAPNSLLMLRDDGSGS 650
Query: 762 FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDEL 821
Y+ GL NG+LLR + D +
Sbjct: 651 IYLNVGLTNGVLLRADV----------------------------------------DSV 670
Query: 822 PINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQ-TARHSLAYTSISFQPSTH 880
L R +G P L +S A M+ALS RPWL + A + +S++P H
Sbjct: 671 TGQLSDTRARFLGARPPKLSAVSVQGKAAMMALSSRPWLGHFDLANRFALSPLSYEPLEH 730
Query: 881 ATPVCSVECPKGILFVAENSLNL 903
A P S CP+G++ VA N+L +
Sbjct: 731 AAPFSSDACPEGVVAVAGNTLRI 753
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPW 98
KG V +G+ +P + ++V + +EL+ E G +Q++ VFG I+ LA
Sbjct: 10 KGGGVQCAVYGNFSAPKAQEIVVSRNKVLELLRPDESGKMQTIVSTEVFGVIRSLAAF-- 67
Query: 99 NKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRML 158
+ N +D LV SDSG++ L + E +RF V Q G R G+ L
Sbjct: 68 --RLTGAN-----RDYLVCGSDSGRIVVLQYDKERNRFDKVHQETFGKSGCRRIVPGQFL 120
Query: 159 AVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
VD G I ++A E ++ L+ + +++
Sbjct: 121 CVDPKGRAIMIAAIEKAKLVYVLNRDTEANL 151
>gi|186511557|ref|NP_001118940.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|332657118|gb|AEE82518.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
Length = 1067
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 183/439 (41%), Gaps = 92/439 (20%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLR++R+GI + + + + QGI G W+
Sbjct: 326 NLGPIVDFCVVDLERQGQGQVVTCSGAFKDGSLRVVRNGIGINE--QASVELQGIKGMWS 383
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ + + + +FLV+SF+ ETR+L + L + + T+ GF V TL C LVQ+
Sbjct: 384 LKSSIDEAFDTFLVVSFISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQV 443
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T + + W P ++++ + ++++T ++
Sbjct: 444 TSNSVRLVSST----------TRELRDEWHAPAGFTVNVATANASQVLLATGGGHLVY-- 491
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + ++ E+QH L+ E+SC+ I +PI N + L A +
Sbjct: 492 ----LEIGDGKLTEVQHALLEYEVSCLDI-----------NPIG--DNPNYSQLAA---V 531
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYV 764
G I S+ L+ + KE L G I+ + + A G Y+
Sbjct: 532 GMWTDISVRIFSLPELTLITKEQL----GGEIIPRSVLLCAFEGI------------SYL 575
Query: 765 LAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN 824
L L +G LL F+ T++ + KD ++
Sbjct: 576 LCALGDGHLLNFQMD--------------------------------TTTGQLKDRKKVS 603
Query: 825 LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPV 884
L G P+ L S + A SDRP ++ ++ L Y++++ + +H P
Sbjct: 604 L--------GTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 655
Query: 885 CSVECPKGILFVAENSLNL 903
S P + E L +
Sbjct: 656 NSAAFPDSLAIAREGELTI 674
>gi|312283457|dbj|BAJ34594.1| unnamed protein product [Thellungiella halophila]
Length = 1088
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 182/439 (41%), Gaps = 92/439 (20%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLRI+R+GI + + + + QGI G W+
Sbjct: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAFKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ + + + +FLV+SF+ ETRVL + L + + T+ GF V TL C LVQ+
Sbjct: 405 LKSSIDEAFDTFLVVSFISETRVLAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQV 464
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T + + W P ++++ + ++++T ++
Sbjct: 465 TSNSVRLVSST----------TRELRDEWHAPAGFTVNVATANASQVLLATGGGHLVY-- 512
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + ++ E+QH L+ E+SC+ I +PI N S A +
Sbjct: 513 ----LEIGDGKLTEVQHAVLEYEVSCLDI-----------NPIGDNPNYSQLA-----SV 552
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYV 764
G I S+ L+ + KE L G I+ + + A G Y+
Sbjct: 553 GMWTDISVRIFSLPELTLITKEQL----GGEIIPRSVLLCAFEGI------------SYL 596
Query: 765 LAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN 824
L L +G LL F+ T++ + KD ++
Sbjct: 597 LCALGDGHLLNFQLD--------------------------------TTTGQLKDRKKVS 624
Query: 825 LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPV 884
L G P+ L S + A SDRP ++ ++ L Y++++ + +H P
Sbjct: 625 L--------GTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 676
Query: 885 CSVECPKGILFVAENSLNL 903
S P + E L +
Sbjct: 677 NSAAFPDSLAIAREGELTI 695
>gi|15235577|ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|55976605|sp|Q9M0V3.1|DDB1A_ARATH RecName: Full=DNA damage-binding protein 1a; AltName:
Full=UV-damaged DNA-binding protein 1a; Short=DDB1a
gi|7267302|emb|CAB81084.1| UV-damaged DNA binding factor-like protein [Arabidopsis thaliana]
gi|25054828|gb|AAN71904.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
gi|332657117|gb|AEE82517.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
Length = 1088
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 183/439 (41%), Gaps = 92/439 (20%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLR++R+GI + + + + QGI G W+
Sbjct: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAFKDGSLRVVRNGIGINE--QASVELQGIKGMWS 404
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ + + + +FLV+SF+ ETR+L + L + + T+ GF V TL C LVQ+
Sbjct: 405 LKSSIDEAFDTFLVVSFISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQV 464
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T + + W P ++++ + ++++T ++
Sbjct: 465 TSNSVRLVSST----------TRELRDEWHAPAGFTVNVATANASQVLLATGGGHLVY-- 512
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + ++ E+QH L+ E+SC+ I +PI N + L A +
Sbjct: 513 ----LEIGDGKLTEVQHALLEYEVSCLDI-----------NPIG--DNPNYSQLAA---V 552
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYV 764
G I S+ L+ + KE L G I+ + + A G Y+
Sbjct: 553 GMWTDISVRIFSLPELTLITKEQL----GGEIIPRSVLLCAFEGI------------SYL 596
Query: 765 LAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN 824
L L +G LL F+ T++ + KD ++
Sbjct: 597 LCALGDGHLLNFQMD--------------------------------TTTGQLKDRKKVS 624
Query: 825 LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPV 884
L G P+ L S + A SDRP ++ ++ L Y++++ + +H P
Sbjct: 625 L--------GTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 676
Query: 885 CSVECPKGILFVAENSLNL 903
S P + E L +
Sbjct: 677 NSAAFPDSLAIAREGELTI 695
>gi|357132340|ref|XP_003567788.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
distachyon]
Length = 1090
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 184/440 (41%), Gaps = 94/440 (21%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GS+R++R+GI + + + + QGI G W+
Sbjct: 348 NLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSIRVVRNGIGINE--QASVELQGIKGLWS 405
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ +DPY +FLV+SF+ ETR L + + + + T+ GF + TL C LL+Q+
Sbjct: 406 LKSSFNDPYDTFLVVSFISETRFLAMNMEDELEETEIEGFDAQIQTLFCQNAISDLLIQV 465
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL S + W P+ S+++ + + ++++T ++
Sbjct: 466 TANSVRLVSCA----------SRELVDHWNAPDGFSVNVASANASQVLLATGGGHLVY-- 513
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + ++ E++H +L+ E+SC+ + +PI N +L A I
Sbjct: 514 ----LEIRDAKLVEVKHAQLEHEISCVDL-----------NPIG--ENPQYSSLAA---I 553
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRL-VLADQFY 763
G I S+ L + KE L G IV P+ V L L Y
Sbjct: 554 GMWTDISVSLLSLPDLELIRKENL----GGEIV-------------PRSVLLCTLEGVSY 596
Query: 764 VLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPI 823
+L L +G L F + S+ E D+ +
Sbjct: 597 LLCALGDGHLFSF--------------------------------LLNVSTGELTDKKKV 624
Query: 824 NLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATP 883
+L G P+ L S + A SDRP ++ ++ L Y++++ + H P
Sbjct: 625 SL--------GTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCP 676
Query: 884 VCSVECPKGILFVAENSLNL 903
+ P + E L++
Sbjct: 677 FNTAAFPDSLAIAKEGELSI 696
>gi|225443990|ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
Length = 1089
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 198/478 (41%), Gaps = 98/478 (20%)
Query: 434 WVEGRFLSAFVEMGDGMVLK---EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQM 487
+++ F+ GD ++K + + + Y ++ N+ PI+D VVD + + Q+
Sbjct: 308 YLDNAFVYVGSSYGDSQLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQV 367
Query: 488 FACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEET 547
C G +GSLRI+R+GI + + + + QGI G W++R DP+ +FLV+SF+ ET
Sbjct: 368 VTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWSLRSSTDDPHDTFLVVSFISET 425
Query: 548 RVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPL 606
R+L + L + + T+ GF V TL C LVQ+ ++VRL T
Sbjct: 426 RILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGST---------- 475
Query: 607 SYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQ 665
S + W P S+++ ++++T ++ L + + E++H +L+
Sbjct: 476 SRELRNEWKAPSGYSVNVATANATQVLLATGGGHLVY------LEIGDGTLTEVKHAQLE 529
Query: 666 SELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPK 725
++SC+ I +PI N + L A +G I S+ L+ + K
Sbjct: 530 YDISCLDI-----------NPIG--ENPNFSQLAA---VGMWTDISVRIFSLPDLNLITK 573
Query: 726 EGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIP 785
E L G I+ + + + G IP Y+L L +G LL F
Sbjct: 574 EYL----GGEIIPRSVLLCSFEG-IP-----------YLLCALGDGHLLNF--------- 608
Query: 786 SSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSD 845
+ S+ E D ++L G P+ L S
Sbjct: 609 -----------------------LLNMSTGELTDRKKVSL--------GTQPITLRTFSS 637
Query: 846 SLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ A SDRP ++ ++ L Y++++ + +H P S P + E L +
Sbjct: 638 KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGDLTI 695
>gi|167522323|ref|XP_001745499.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775848|gb|EDQ89470.1| predicted protein [Monosiga brevicollis MX1]
Length = 1172
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 181/447 (40%), Gaps = 99/447 (22%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
I+++AP++D + D + Q++A CG SLR++R G+ + + + P+ +
Sbjct: 364 IESLAPVMDCQLADAGQQDGPQLYALCGRGSGSSLRVLRHGLEVSAMAES-PLPGNPSAV 422
Query: 525 WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
W+V+ V D +++V+SFV+ T VL +G +VTDS GF V TL+ + D L+Q
Sbjct: 423 WSVKRHVEDEADTYIVMSFVDATLVLGIGETVEEVTDS-GFLGSVATLSASRIGDDALLQ 481
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFI 643
IH +R + H G I W P+ IS AV +V+ SN
Sbjct: 482 IHAMGIR-----HILHDGRI-------NEWKAPDRTKISHCAVNERQAVVALSNG----- 524
Query: 644 LGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVI 703
E+ + L I +H ER + SS ++ + ++ +P G
Sbjct: 525 --------------ELVYFELDRSGQLI----EHSERVEMSSQVTAL---ALAPIPEGAQ 563
Query: 704 IGYTFVIGTHRPSVEVLSFVPKEGLRVL-------ASGSIVLTNTMGTAISGCIPQDVRL 756
+G +V ++S + L L A+ S+ + GT P + L
Sbjct: 564 TARFLALGLDDQTVRLMSLDKSDCLAPLSMQALPGAAASLCMVEVRGTHGE---PSGLSL 620
Query: 757 VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFE 816
+ GL NG+L+R
Sbjct: 621 AI--------GLGNGVLMR----------------------------------------S 632
Query: 817 SKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQ 876
D L +L TR +G V L P+ + + ++ALS +PWL + T +S+
Sbjct: 633 RVDTLTADLSDTRTRYLGARAVKLFPVKVAEEPAVLALSTKPWLSYRYQGHSRITPLSYD 692
Query: 877 PSTHATPVCSVECPKGILFVAENSLNL 903
+A+ S +CP+G+ VA N+L +
Sbjct: 693 ALEYASAFSSDQCPEGVAAVAGNTLRI 719
>gi|297740793|emb|CBI30975.3| unnamed protein product [Vitis vinifera]
Length = 1043
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 198/478 (41%), Gaps = 98/478 (20%)
Query: 434 WVEGRFLSAFVEMGDGMVLK---EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQM 487
+++ F+ GD ++K + + + Y ++ N+ PI+D VVD + + Q+
Sbjct: 308 YLDNAFVYVGSSYGDSQLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQV 367
Query: 488 FACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEET 547
C G +GSLRI+R+GI + + + + QGI G W++R DP+ +FLV+SF+ ET
Sbjct: 368 VTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWSLRSSTDDPHDTFLVVSFISET 425
Query: 548 RVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPL 606
R+L + L + + T+ GF V TL C LVQ+ ++VRL T
Sbjct: 426 RILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGST---------- 475
Query: 607 SYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQ 665
S + W P S+++ ++++T ++ L + + E++H +L+
Sbjct: 476 SRELRNEWKAPSGYSVNVATANATQVLLATGGGHLVY------LEIGDGTLTEVKHAQLE 529
Query: 666 SELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPK 725
++SC+ I +PI N + L A +G I S+ L+ + K
Sbjct: 530 YDISCLDI-----------NPIG--ENPNFSQLAA---VGMWTDISVRIFSLPDLNLITK 573
Query: 726 EGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIP 785
E L G I+ + + + G IP Y+L L +G LL F
Sbjct: 574 EYL----GGEIIPRSVLLCSFEG-IP-----------YLLCALGDGHLLNF--------- 608
Query: 786 SSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSD 845
+ S+ E D ++L G P+ L S
Sbjct: 609 -----------------------LLNMSTGELTDRKKVSL--------GTQPITLRTFSS 637
Query: 846 SLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ A SDRP ++ ++ L Y++++ + +H P S P + E L +
Sbjct: 638 KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGDLTI 695
>gi|225443992|ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
Length = 1068
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 198/478 (41%), Gaps = 98/478 (20%)
Query: 434 WVEGRFLSAFVEMGDGMVLK---EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQM 487
+++ F+ GD ++K + + + Y ++ N+ PI+D VVD + + Q+
Sbjct: 287 YLDNAFVYVGSSYGDSQLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQV 346
Query: 488 FACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEET 547
C G +GSLRI+R+GI + + + + QGI G W++R DP+ +FLV+SF+ ET
Sbjct: 347 VTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWSLRSSTDDPHDTFLVVSFISET 404
Query: 548 RVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPL 606
R+L + L + + T+ GF V TL C LVQ+ ++VRL T
Sbjct: 405 RILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGST---------- 454
Query: 607 SYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQ 665
S + W P S+++ ++++T ++ L + + E++H +L+
Sbjct: 455 SRELRNEWKAPSGYSVNVATANATQVLLATGGGHLVY------LEIGDGTLTEVKHAQLE 508
Query: 666 SELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPK 725
++SC+ I +PI N + L A +G I S+ L+ + K
Sbjct: 509 YDISCLDI-----------NPIG--ENPNFSQLAA---VGMWTDISVRIFSLPDLNLITK 552
Query: 726 EGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIP 785
E L G I+ + + + G IP Y+L L +G LL F
Sbjct: 553 EYL----GGEIIPRSVLLCSFEG-IP-----------YLLCALGDGHLLNF--------- 587
Query: 786 SSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSD 845
+ S+ E D ++L G P+ L S
Sbjct: 588 -----------------------LLNMSTGELTDRKKVSL--------GTQPITLRTFSS 616
Query: 846 SLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ A SDRP ++ ++ L Y++++ + +H P S P + E L +
Sbjct: 617 KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGDLTI 674
>gi|297809743|ref|XP_002872755.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp.
lyrata]
gi|297318592|gb|EFH49014.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp.
lyrata]
Length = 1088
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 182/439 (41%), Gaps = 92/439 (20%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLR++R+GI + + + + QGI G W+
Sbjct: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAFKDGSLRVVRNGIGINE--QASVELQGIKGMWS 404
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ + + + +FLV+SF+ ETR+L + L + + T+ GF V TL C LVQ+
Sbjct: 405 LKSSIDEAFDTFLVVSFISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQV 464
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T + + W P ++++ + ++++T ++
Sbjct: 465 TSNSVRLVSST----------TRELRDEWHAPAGFTVNVATANASQVLLATGGGHLVY-- 512
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + ++ E+QH L+ E+SC+ I +PI N S A +
Sbjct: 513 ----LEIGDGKLTEVQHALLEYEVSCLDI-----------NPIGDNPNYSQLA-----SV 552
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYV 764
G I S+ L+ + KE L G I+ + + A G Y+
Sbjct: 553 GMWTDISVRIFSLPELTLITKEQL----GGEIIPRSVLLCAFEGI------------SYL 596
Query: 765 LAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN 824
L L +G LL F+ T++ + KD ++
Sbjct: 597 LCALGDGHLLNFQLD--------------------------------TTTGQLKDRKKVS 624
Query: 825 LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPV 884
L G P+ L S + A SDRP ++ ++ L Y++++ + +H P
Sbjct: 625 L--------GTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 676
Query: 885 CSVECPKGILFVAENSLNL 903
S P + E L +
Sbjct: 677 NSAAFPDSLAIAREGELTI 695
>gi|322797581|gb|EFZ19622.1| hypothetical protein SINV_00421 [Solenopsis invicta]
Length = 1217
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 188/917 (20%), Positives = 337/917 (36%), Gaps = 199/917 (21%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L + + + HG+ +++ + S+EL+ + G V ++ VFG
Sbjct: 2 YLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFGI 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +VV SDSG++ L + + F V Q G
Sbjct: 62 IRSLMAFRLTGG---------TKDYIVVGSDSGRIVILEYIAAKNTFEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRI 209
R G+ LA+D G + + A E + ++ L+ + + ++ S E S + +
Sbjct: 113 RRIVPGQYLAIDPKGRAVMIGAIEKQKLVYILNRDA-----EARLTISSPLEAHKSNTLV 167
Query: 210 AQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISVL 269
+ + F + + +P + + L L +G N H +
Sbjct: 168 YHTVGVDVGFENPMFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLN---HVVRKY 224
Query: 270 SCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLP-PALEE 328
S E A+ +V VP PS V S N+L L +
Sbjct: 225 SEPLEEH--ANFLVSVPGG-------------------NDGPSGVLICSENYLTYKNLGD 263
Query: 329 QNFVDESC----RVHDVDDEGLFNVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSWSW 384
Q+ D C R +D+DD + C+ A +K + +
Sbjct: 264 QH--DIRCPIPRRRNDLDDPERGMIFVCS------------------ATHKTKSMFFFLA 303
Query: 385 EPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRF----L 440
+ E I K+ D I++ + D V S C+ K L+V F L
Sbjct: 304 QTEQGDIFKITLETDEDMVTEIKLKY-FDTVPVAASMCVLK----TGFLFVASEFGNHYL 358
Query: 441 SAFVEMGD---------GMVLKEENGRLVYTSPIQN---------IAPILDMSVVDYHDE 482
+GD M L+E + P++N ++PI+ V D +E
Sbjct: 359 YQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANE 418
Query: 483 KRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLS 542
Q++ CG P +LR++R G+ + ++ + + WTV+ ++ + Y +++++S
Sbjct: 419 DTPQLYIACGRGPRSTLRVLRHGLEVSEMA-VSELPGNPNAVWTVKRRIDEEYDAYIIVS 477
Query: 543 FVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSG 602
FV T VL +G +VTDS GF TL+C + + LVQ++ + +R
Sbjct: 478 FVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSALGEDALVQVYPDGIR----------- 525
Query: 603 GIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHM 662
I V P +I AV ++++ + ++ + ++ Y +
Sbjct: 526 HIRADKRVNEWKAPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEY----TERK 581
Query: 663 RLQSELSCISIP----------------QKHPERRKSSSPISLVSNSSVPALPAGVIIGY 706
++ SE+ C+++ Q + R S P ++ S+ ALPA
Sbjct: 582 KMPSEVMCMALGNVAVGEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAA---- 637
Query: 707 TFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLA 766
E L ++ G+ N+ A PQ L Y+
Sbjct: 638 -------------------ESLCIVEMGAKEADNSEDAA-----PQQSSL------YLNI 667
Query: 767 GLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQ 826
GL+NG+LLR + PIS +T
Sbjct: 668 GLQNGVLLR--------------TVLDPISGDLADTR----------------------- 690
Query: 827 LIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCS 886
TR +G PV L + + ++A+S R WL ++ T +S++ A+ S
Sbjct: 691 ---TRYLGSRPVKLFRIRMQGNQAVLAMSSRSWLSYYHQNRFHLTPLSYESLEFASGFSS 747
Query: 887 VECPKGILFVAENSLNL 903
+CP+GI+ ++ N+L +
Sbjct: 748 EQCPEGIVAISTNTLRI 764
>gi|242089089|ref|XP_002440377.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
gi|241945662|gb|EES18807.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
Length = 1783
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 181/440 (41%), Gaps = 94/440 (21%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLR++R+GI + + + + QGI G W+
Sbjct: 348 NLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLRVVRNGIGINE--QASVELQGIKGLWS 405
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ +DPY +LV+SF+ ETR L + + + + T+ GF TL C + LL+Q+
Sbjct: 406 LKSSFNDPYDMYLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNATNDLLIQV 465
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T S + W P S+++ + + ++++T ++
Sbjct: 466 TANSVRLVSCT----------SRELVDQWNAPAGFSVNVASANASQVLLATGGGHLVY-- 513
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + ++ E++H +L+ E+SC+ + +PI N +L A +
Sbjct: 514 ----LEIRDSKLVEVKHAQLEHEISCLDL-----------NPIG--ENPQYSSLAA---V 553
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRL-VLADQFY 763
G I S+ L + KE L G IV P+ V L L Y
Sbjct: 554 GMWTDISVRIFSLPDLELIRKENL----GGEIV-------------PRSVLLCTLEGVSY 596
Query: 764 VLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPI 823
+L L +G L F + S+ E D +
Sbjct: 597 LLCALGDGNLFSF--------------------------------LLNASTGELTDRKKV 624
Query: 824 NLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATP 883
L G P+ L S + A SDRP ++ ++ L Y++++ + H P
Sbjct: 625 TL--------GTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCP 676
Query: 884 VCSVECPKGILFVAENSLNL 903
+ P + E L++
Sbjct: 677 FNTAAFPDSLAIAKEGELSI 696
>gi|157131296|ref|XP_001662180.1| spliceosomal protein sap [Aedes aegypti]
gi|108881836|gb|EAT46061.1| AAEL002709-PA [Aedes aegypti]
Length = 1215
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 121/529 (22%), Positives = 206/529 (38%), Gaps = 117/529 (22%)
Query: 392 PKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAF-VEMGDGM 450
P CV F + FG+ +L + + G E F SA +E GD
Sbjct: 335 PATAMCVLKTGFLFVACEFGNH----YLYQIAHLGDDDD-----EPEFSSAMPLEEGDTF 385
Query: 451 VLK-EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLE 509
+ LV I + APIL V D +E Q++ CG P S+R++R G+ +
Sbjct: 386 FFAPRQLKNLVMVDEIHSYAPILGCQVADLANEDTPQLYLACGRGPRSSIRVLRHGLEVS 445
Query: 510 KLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
++ + + WTV+ ++ + + +++++SFV T VL +G +VTDS GF
Sbjct: 446 EMA-VSELPGNPNAVWTVKKRIDEEFDAYIIVSFVNATLVLSIGDTVEEVTDS-GFLGTT 503
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHN 629
TL+C + D LVQ++ + +R I V P +I+ AV
Sbjct: 504 PTLSCSALGDDALVQVYPDGIR-----------HIRADKRVNEWKAPGKKTITKCAVNQR 552
Query: 630 MIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISL 689
++++ S ++ E+ ++ ER+K S +
Sbjct: 553 QVVIALSGGELVYF-----------------------EMDPTGQLNEYTERKKMPSDVMC 589
Query: 690 VSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGSIVL------ 738
++ SV PAG + +G +V V+S P + ++ L S + L
Sbjct: 590 MALGSV---PAGEQRSWFLAVGLADNTVRVISLDPSDCLSPRSMQALPSAAESLCIVEMG 646
Query: 739 ---TNTMGTAIS-GCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSP 794
TN G A S GCI Y+ GL NG+LLR + P
Sbjct: 647 TGDTNEEGVASSAGCI------------YLNIGLTNGVLLR--------------TVLDP 680
Query: 795 ISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIAL 854
+S +T TR +G PV L + ++A+
Sbjct: 681 VSGDLADTR--------------------------TRYLGSRPVKLFRIKMQGSEAVLAM 714
Query: 855 SDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
S R WL ++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 715 SSRTWLSYYFQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 763
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 11/156 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL +L + + + HG +++ K S+ELV + G V ++ + VFG
Sbjct: 2 YLYNFILQRATGITHAVHGCFAGTKQQEILLSKGKSLELVRPDPNTGKVHTLLQTEVFGV 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L F KD VV SDSG++ L + ++ V Q G
Sbjct: 62 IRSLM------SFRLTGGT---KDYAVVGSDSGRIVILEYNPAKNQLEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
R G+ LA+D G + + A E + ++ L+ S
Sbjct: 113 RRIVPGQFLAIDPKGRAVMIGAIEKQKLVYILNRDS 148
>gi|302831461|ref|XP_002947296.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f.
nagariensis]
gi|300267703|gb|EFJ51886.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f.
nagariensis]
Length = 1221
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 214/550 (38%), Gaps = 126/550 (22%)
Query: 403 FFMIEIAFGSDGHKVHLSECLYKG--------------PPCKALLWVEGRFLSAFVEMGD 448
FF+++ +G D +KV L+ Y+G PPC ++ ++ FL A E G+
Sbjct: 296 FFLVQSEYG-DIYKVTLA---YEGEAVTELKIKYFDTIPPCTSIAVLKTGFLFAASEYGN 351
Query: 449 ---------------------GMVLKEENGRLVYTSP-----------IQNIAPILDMSV 476
+V EE + V+ P + ++ PI DM V
Sbjct: 352 HALYQFVGTGEDDEDVESSSAALVQTEEGFQPVFFEPRPLKNLLLIDEMASLMPITDMKV 411
Query: 477 VDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYH 536
+ +E+ Q++A CG P SL ++R G+++ +L +P+ T WTVR +D +
Sbjct: 412 ANLLNEEIPQIYALCGHGPRASLSVLRPGLAVTELA-VSPLPGAPTAVWTVRRNATDEFD 470
Query: 537 SFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPT 596
+F+V+SF T V +G + +S GF V TL L+AD ++Q A +
Sbjct: 471 AFIVVSFANATLVFSIGEEVKETNES-GFLGTVPTLHTQLLADNSMLQ----ATFFDLSE 525
Query: 597 MVAHSGGIPLSYP--VCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSH 653
+ GG+ P W P +I A + ++ + V L V
Sbjct: 526 PQVYPGGLRHIKPDRRINEWKVPGRRNIKAAASNEKQVAIALQGGE----VTVFELEVGT 581
Query: 654 YEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTH 713
+ E + L ++SC+ I P +P G++ +GT+
Sbjct: 582 GLLVEAEKRDLGEDVSCLEI----------------------PPVPEGLVRSSFLAVGTY 619
Query: 714 RPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGML 773
+V VLS P +GL+ L+ ++ + P R F + GL+NG+L
Sbjct: 620 DQTVRVLSLDPGQGLKNLSMQALNSVPESILMLYNTGPGTERATEGGLF-LHVGLQNGIL 678
Query: 774 LRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRI 833
+R E D + L TR +
Sbjct: 679 IRSEV----------------------------------------DRISGQLTDSRTRFL 698
Query: 834 GITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGI 893
G P L + + M+ALS RPWL + + +S++ +A+ S +CP+G
Sbjct: 699 GTKPPKLFAAAVRGNRCMLALSSRPWLGYNDQGRFNLSPLSYEALDYASGFASDQCPEGF 758
Query: 894 LFVAENSLNL 903
+ V +++L +
Sbjct: 759 VAVVKSTLRI 768
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPW 98
+ S + +G+ +P + +VV + +EL+ E+G +Q+V VFG I+ +A V
Sbjct: 10 RASGIQSAVYGNFSAPKAQEVVVSRGKILELLRPNENGKMQTVVATEVFGCIRSMAAVRL 69
Query: 99 NKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRML 158
D LVV SDSG++ L F + + + V Q G R G+ +
Sbjct: 70 TGSI---------LDHLVVGSDSGRIILLKFNKDKNVWVKVHQETFGRSGCRRIVPGQYI 120
Query: 159 AVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
AVD G + A E + ++ L+ + +++
Sbjct: 121 AVDPKGRACMIGAVEKQKFVYVLNRDAAANL 151
>gi|170041368|ref|XP_001848437.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
gi|167864946|gb|EDS28329.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
Length = 1215
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 182/451 (40%), Gaps = 88/451 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I + APIL V D +E Q++ CG P S+R++R G+ + ++ + +
Sbjct: 395 LVMVDEIHSFAPILGCQVADLANEDTPQLYLACGRGPRSSIRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIGDTVEEVTDS-GFLGTTPTLCCSALG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ S
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKAPGKKTIIKCAVNSRQVVIALSGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ E+ ++ ER+K S + ++ SV
Sbjct: 562 ELVYF-----------------------EMDPTGQLNEYTERKKMPSDVMCMALGSV--- 595
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGSIVL-TNTMGTAISGCIPQ 752
PAG + +G +V ++S P + ++ L S + L MGT S +
Sbjct: 596 PAGEQRAWFLAVGLADNTVRIISLDPADCLSPRSMQALPSAAESLCIVEMGTGESN---E 652
Query: 753 DVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAAT 812
+ + A FY+ GL NG+LLR + P+S +T
Sbjct: 653 EGTVSTAGCFYLNIGLTNGVLLR--------------TVLDPVSGDLADTR--------- 689
Query: 813 SSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTS 872
TR +G PV L + ++A+S R WL ++ T
Sbjct: 690 -----------------TRYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYYYQNRFHLTP 732
Query: 873 ISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 733 LSYETLEYASGFSSEQCAEGIVAISTNTLRI 763
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 11/156 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL +L + + + HG +++ K S+ELV + G V ++ + VFG
Sbjct: 2 YLYNFILQRATGITHAVHGCFAGTKQQEILLSKGKSLELVRPDPNTGKVHTLLQTEVFGV 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L F KD VV SDSG++ L + ++ V Q G
Sbjct: 62 IRSLM------SFRLTGGT---KDYAVVGSDSGRIVILEYNAAKNQLEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
R G+ LA+D G + + A E + ++ L+ S
Sbjct: 113 RRIVPGQFLAIDPKGRAVMIGAIEKQKLVYILNRDS 148
>gi|413946716|gb|AFW79365.1| hypothetical protein ZEAMMB73_562969 [Zea mays]
Length = 1089
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 182/440 (41%), Gaps = 94/440 (21%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLR++R+GI + + + + QGI G W+
Sbjct: 348 NLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLRVVRNGIGINE--QASVELQGIKGLWS 405
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ ++DP+ +LV+SF+ ETR L + + + + T+ GF TL C + LL+Q+
Sbjct: 406 LKSSINDPFDMYLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQV 465
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T S + W P S+++ + + ++++T ++
Sbjct: 466 TANSVRLVSCT----------SRELVNQWNAPAGFSVNVASANASQVLLATGGGHLVY-- 513
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + ++ E++H +L+ E+SC+ + +PI N +L A +
Sbjct: 514 ----LEIRDAKLVEVKHAQLEHEISCLDL-----------NPIG--ENPQYSSLAA---V 553
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRL-VLADQFY 763
G I S+ L + KE L G IV P+ V L L Y
Sbjct: 554 GMWTDISVRIFSLPDLELIRKENL----GGEIV-------------PRSVLLCTLEGVSY 596
Query: 764 VLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPI 823
+L L +G L F + S+ E D +
Sbjct: 597 LLCALGDGNLFSF--------------------------------LLNASTGELTDRKKV 624
Query: 824 NLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATP 883
L G P+ L S + A SDRP ++ ++ L Y++++ + H P
Sbjct: 625 TL--------GTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCP 676
Query: 884 VCSVECPKGILFVAENSLNL 903
+ P + E L++
Sbjct: 677 FNTAAFPDSLAIAKEGELSI 696
>gi|332026090|gb|EGI66238.1| Splicing factor 3B subunit 3 [Acromyrmex echinatior]
Length = 1217
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 188/917 (20%), Positives = 338/917 (36%), Gaps = 199/917 (21%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L + + + HG+ +++ + S+EL+ + G V ++ VFG
Sbjct: 2 YLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFGI 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +VV SDSG++ L + + + F V Q G
Sbjct: 62 IRSLMAFRLTGG---------TKDYIVVGSDSGRIVILEYISAKNIFEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRI 209
R G+ LA+D G + + A E + ++ L+ + + ++ S E S + +
Sbjct: 113 RRIVPGQYLAIDPKGRAVMIGAIEKQKLVYILNRDA-----EARLTISSPLEAHKSNTLV 167
Query: 210 AQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISVL 269
+ + F + + +P + + L L +G N H +
Sbjct: 168 YHTVGVDVGFENPMFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLN---HVVRKY 224
Query: 270 SCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLP-PALEE 328
S E A+ +V VP PS V S N+L L +
Sbjct: 225 SEPLEEH--ANFLVSVPGG-------------------NDGPSGVLICSENYLTYKNLGD 263
Query: 329 QNFVDESC----RVHDVDDEGLFNVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSWSW 384
Q+ D C R +D+DD + C+ A +K + +
Sbjct: 264 QH--DIRCPIPRRRNDLDDPERGMIFVCS------------------ATHKTKSMFFFLA 303
Query: 385 EPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRF----L 440
+ E I K+ D I++ + D V S C+ K L+V F L
Sbjct: 304 QTEQGDIFKITLETDEDMVTEIKLKY-FDTVPVAASMCVLK----TGFLFVASEFGNHYL 358
Query: 441 SAFVEMGD---------GMVLKEENGRLVYTSPIQN---------IAPILDMSVVDYHDE 482
+GD M L+E + P++N ++PI+ V D +E
Sbjct: 359 YQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANE 418
Query: 483 KRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLS 542
Q++ CG P +LR++R G+ + ++ + + WTV+ ++ + Y +++++S
Sbjct: 419 DTPQLYIACGRGPRSTLRVLRHGLEVSEMA-VSELPGNPNAVWTVKRRIDEEYDAYIIVS 477
Query: 543 FVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSG 602
FV T VL +G +VTDS GF TL+C + + LVQ++ + +R
Sbjct: 478 FVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSALGEDALVQVYPDGIR----------- 525
Query: 603 GIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHM 662
I V P +I AV ++++ + ++ + ++ Y +
Sbjct: 526 HIRADKRVNEWKAPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEY----TERK 581
Query: 663 RLQSELSCISIP----------------QKHPERRKSSSPISLVSNSSVPALPAGVIIGY 706
++ SE+ C+++ Q + R S P ++ S+ ALPA
Sbjct: 582 KMPSEVMCMALGNVAVGEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAA---- 637
Query: 707 TFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLA 766
E L ++ G+ N+ A PQ L Y+
Sbjct: 638 -------------------ESLCIVEMGAKDADNSEDAA-----PQQSSL------YLNI 667
Query: 767 GLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQ 826
GL+NG+LLR + PIS +T
Sbjct: 668 GLQNGVLLR--------------TVLDPISGDLADTR----------------------- 690
Query: 827 LIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCS 886
TR +G PV L + + ++A+S R WL ++ T +S++ A+ S
Sbjct: 691 ---TRYLGSRPVKLFRIRMQGNQAVLAMSSRSWLSYYHQNRFHLTPLSYESLEFASGFSS 747
Query: 887 VECPKGILFVAENSLNL 903
+CP+GI+ ++ N+L +
Sbjct: 748 EQCPEGIVAISTNTLRI 764
>gi|384490247|gb|EIE81469.1| hypothetical protein RO3G_06174 [Rhizopus delemar RA 99-880]
Length = 1197
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 182/442 (41%), Gaps = 87/442 (19%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
++++AP+++ V++ DE+ +++A CG + + RI+ G+ +L + + +
Sbjct: 393 LESMAPLMESKVLNLADEETPRIYAICGRGAQSTFRILNQGVEAAELA-VSELPGNPSAV 451
Query: 525 WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
WT +++ D YH+++V+SF T VL +G +VTD+ GF + TLA + + LVQ
Sbjct: 452 WTTKLRADDQYHAYIVVSFANATLVLSIGETVEEVTDT-GFLTNAPTLAVQQIGEDALVQ 510
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
+H + +R I V P+ +I A I ++ SN ++
Sbjct: 511 VHPHGIR-----------HIRADRRVNEWRAPQGQTIVEAATNSRQIAIALSNGEIVY-- 557
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
+EM +M +E H E R+ S+ I+ ++ V P G +
Sbjct: 558 ------------FEMDNMGQLNE---------HQEHRQMSAYITTLALGEV---PEGRVR 593
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQF-- 762
+G +V +LS P L I + G S CI + + +
Sbjct: 594 ARYIAVGCEDQTVRILSLDPDSCLE-----PISMQALQGVPSSLCIIEMMDTGIEQGHGT 648
Query: 763 -YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDEL 821
Y+ GL NG+ LR I I+ +T
Sbjct: 649 QYLNIGLSNGIFLR--------------TILDTITGQLSDTR------------------ 676
Query: 822 PINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHA 881
R IG V L +S ++ALS +PW+ T ++ L T +S++ H
Sbjct: 677 --------ARFIGAKSVKLFRISIQGHPAVLALSTKPWVSYTFQNRLYLTPLSYEMLEHG 728
Query: 882 TPVCSVECPKGILFVAENSLNL 903
+ + +CP+G++ VA N+L +
Sbjct: 729 SAFVTEQCPEGVVAVAGNTLRI 750
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 41 SVVLQVAHGHLRSPTSNDVVFGKETSIELVI-IGEDGIVQSVCEQAVFGTIKDLAVVPWN 99
+ + Q HG+ +++ ++T +EL+ G + ++ FG I+ +A P+
Sbjct: 12 TAINQAIHGNFSGTKQQEIIVARQTRLELLKPDAASGKIHTILSHECFGLIRSIA--PFR 69
Query: 100 KKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLA 159
+ KD +VV SDSG++ L + + F V Q G R G+ L
Sbjct: 70 LTGGS-------KDFIVVGSDSGRIVILEYNPVKNIFEKVHQETYGKTGCRRIVPGQYLT 122
Query: 160 VDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
D G + +SA E + ++ L+ S +++
Sbjct: 123 ADPKGRAVMISATEKQKLVYILNRDSAANL 152
>gi|328788389|ref|XP_396048.3| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Apis
mellifera]
Length = 1141
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 189/470 (40%), Gaps = 110/470 (23%)
Query: 446 MGDGMVLK-----EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEG 497
+GD ++K +ENG Y P++ N+API+DM+VVD + + QM C G EG
Sbjct: 331 LGDSQLVKLITKADENGS--YCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEG 388
Query: 498 SLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFT 557
SLRIIR+GI +E+ + GI G W +++ + + + LVLSFV +TR+L +
Sbjct: 389 SLRIIRNGIGIEE--HASIDLPGIKGMWALKIGGGN-FDNTLVLSFVGQTRILTLNGEEV 445
Query: 558 DVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYP---VCTSW 614
+ TD GF D T G V + L +QI + RL +SY V + W
Sbjct: 446 EETDIPGFVADEQTFHTGNVTNDLFIQITPTSARL-------------ISYETKTVVSEW 492
Query: 615 FPEHV-SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
PE+ +IS+ A ++ +T N F L +S +I LQ E++C+ I
Sbjct: 493 EPENKRTISVVACNGTQVLCATGNDLFY-------LEISCGQILPKGFTTLQYEVACLDI 545
Query: 674 PQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLAS 733
SP+ + + + A +G I H ++ L + KE L
Sbjct: 546 -----------SPLDGNTEAKIAA------VGLWTHISVHILTLPALEEINKE----LLG 584
Query: 734 GSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHS 793
G I+ + + T G Y+L L +G + F + I S +
Sbjct: 585 GEIIPRSILMTCFEG------------NTYLLCALGDGSMYYFTLHKQNGILSDKKKV-- 630
Query: 794 PISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIA 853
+G P L ++ A
Sbjct: 631 --------------------------------------TLGTQPTVLRTFRSLFTTNVFA 652
Query: 854 LSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
SDRP ++ ++ H L +++++ + H + + P + ++++ +
Sbjct: 653 CSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTI 702
>gi|380025901|ref|XP_003696702.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
[Apis florea]
Length = 1141
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 189/470 (40%), Gaps = 110/470 (23%)
Query: 446 MGDGMVLK-----EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEG 497
+GD ++K +ENG Y P++ N+API+DM+VVD + + QM C G EG
Sbjct: 331 LGDSQLVKLITKADENGS--YCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEG 388
Query: 498 SLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFT 557
SLRIIR+GI +E+ + GI G W +++ + + + LVLSFV +TR+L +
Sbjct: 389 SLRIIRNGIGIEE--HASIDLPGIKGMWALKIGGGN-FDNTLVLSFVGQTRILTLNGEEV 445
Query: 558 DVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYP---VCTSW 614
+ TD GF D T G V + L +QI + RL +SY V + W
Sbjct: 446 EETDIPGFVADEQTFHTGNVTNDLFIQITPTSARL-------------ISYETKTVVSEW 492
Query: 615 FPEHV-SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
PE+ +IS+ A ++ +T N F L +S +I LQ E++C+ I
Sbjct: 493 EPENKRTISVVACNGTQVLCATGNDLFY-------LEISCGQILPKGFTTLQYEVACLDI 545
Query: 674 PQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLAS 733
SP+ + + + A +G I H ++ L + KE L
Sbjct: 546 -----------SPLDGNTEAKIAA------VGLWTHISVHILTLPALEEINKE----LLG 584
Query: 734 GSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHS 793
G I+ + + T G Y+L L +G + F + I S +
Sbjct: 585 GEIIPRSILMTCFEG------------NTYLLCALGDGSMYYFTLHKQNGILSDKKKV-- 630
Query: 794 PISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIA 853
+G P L ++ A
Sbjct: 631 --------------------------------------TLGTQPTVLRTFRSLFTTNVFA 652
Query: 854 LSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
SDRP ++ ++ H L +++++ + H + + P + ++++ +
Sbjct: 653 CSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTI 702
>gi|340714589|ref|XP_003395809.1| PREDICTED: DNA damage-binding protein 1-like [Bombus terrestris]
Length = 1141
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 198/483 (40%), Gaps = 113/483 (23%)
Query: 431 ALLWVEGRFLSAFVEMGDGMVLK-----EENGRLVYTSPIQ---NIAPILDMSVVDYHDE 482
+++V RF GD ++K +ENG Y P++ N+API+DM+VVD +
Sbjct: 323 GVIFVGSRF-------GDSQLVKLITKADENGS--YCVPMETFTNLAPIIDMAVVDLERQ 373
Query: 483 KRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLS 542
+ QM C G EGSLRIIR+GI +E+ + GI G W +++ + + + LVLS
Sbjct: 374 GQGQMVTCSGAFKEGSLRIIRNGIGIEE--HASIDLPGIKGMWALKVGGGN-FDNTLVLS 430
Query: 543 FVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSG 602
FV +TR+L + + TD GF D T G V + L +QI + RL ++H
Sbjct: 431 FVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARL-----ISHE- 484
Query: 603 GIPLSYPVCTSWFPEHV-SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQH 661
+ V + W PE+ +IS+ A ++ +T N F + +S+ +I
Sbjct: 485 ----TKTVVSEWEPENKRTISVVACNGTQVLCATGNDLFY-------MEISYGQIVPKGF 533
Query: 662 MRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLS 721
LQ E++C+ I SP+ + + + A+ + TH SV +L+
Sbjct: 534 ATLQYEVACLDI-----------SPLDGHTEAKIAAVG----------LWTH-ISVRILT 571
Query: 722 FVPKEGL-RVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPP 780
E + + L G I+ + + T G Y+L L +G + F
Sbjct: 572 LPALEEINKELLGGEIIPRSILMTCFEG------------NTYLLCALGDGSMYYFTLHK 619
Query: 781 DSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFL 840
+ I S + +G P L
Sbjct: 620 QNGILSDKKKV----------------------------------------TLGTQPTVL 639
Query: 841 VPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENS 900
++ A SDRP ++ ++ H L +++++ + H + + P + +++
Sbjct: 640 RTFRSLFTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDST 699
Query: 901 LNL 903
+ +
Sbjct: 700 VTI 702
>gi|168066745|ref|XP_001785293.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663100|gb|EDQ49884.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1090
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 178/445 (40%), Gaps = 104/445 (23%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D+ VVD + + Q+ C G +GSLRI+R+GI + + + + QGI G W+
Sbjct: 347 NLGPIVDLCVVDLERQGQGQVVTCSGAFKDGSLRIVRNGIGINE--QASAELQGIKGMWS 404
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFT-DVTDSVGFRPDVCTLACGLVADGLLVQI 585
+R SD Y +FLV+SF+ ETR+L + + + T+ GF + TL C LVQ+
Sbjct: 405 LRASSSDVYDTFLVVSFISETRILAMNTDDELEETEIDGFDSEAQTLFCYNAVHDQLVQV 464
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
++RL T W P ++I++ + ++++T ++I
Sbjct: 465 TAGSLRLVDAKTRRQ----------LTEWKAPAPMTINVATANASQVLLATGGGNLVYI- 513
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISI-PQKHPERRKSSSPISLVSNSSVP--ALPAG 701
+ + E+ H++L+ E+SC+ I P R + + + ++ S+ ALP+
Sbjct: 514 -----EIGQGTLVEVAHVQLEYEISCLDINPVGDNPERSNLVAVGMWTDISIRIFALPS- 567
Query: 702 VIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQ 761
L+ + KE L G I+ + + + G
Sbjct: 568 ------------------LTLITKEML----GGEIIPRSVLFCSFDGIA----------- 594
Query: 762 FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDEL 821
Y+L L +G L F P AT + ++
Sbjct: 595 -YLLCALGDGHLFNFTLNP------------------------------ATGELSDRKKI 623
Query: 822 PINLQLIATRRI---GITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPS 878
+ Q IA R T VF A SDRP ++ ++ L Y++++ +
Sbjct: 624 SLGTQPIALRTFRSKNTTHVF-------------AASDRPTVIYSSNKKLLYSNVNLKEV 670
Query: 879 THATPVCSVECPKGILFVAENSLNL 903
H P S P + E L +
Sbjct: 671 NHMCPFNSASFPDSLAIGKEGELTI 695
>gi|443694993|gb|ELT96001.1| hypothetical protein CAPTEDRAFT_155561 [Capitella teleta]
Length = 1215
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 184/452 (40%), Gaps = 91/452 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PI+ + D +E Q+FA CG P +LR++R G+ + ++ + +
Sbjct: 395 LVMVDEMDSLSPIMHCQIADLANEDTPQLFAMCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D + +++++SFV T VL +G +VTDS GF TL+C +
Sbjct: 454 GNPNAVWTVKRNIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSQLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQI+ + +R S W P +I AV ++++ S
Sbjct: 513 DDALVQIYPDGIRHIR------------SDKRVNEWKTPGKKTIVRCAVNQRQVVIALSG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ E+ ++ ER++ SS + + V
Sbjct: 561 GELVYF-----------------------EMDPTGQLNEYTERKELSSDVVCMGLGRV-- 595
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVL------ASGSIVLTNTMGTAISGCIP 751
P+G +G + +V ++S P + L L AS + MG A+ G
Sbjct: 596 -PSGEQRCRFLAVGLNDNTVRIISLDPTDCLSPLSMQALPASPESLCIVEMGGAVEGQEE 654
Query: 752 QDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAA 811
+ L ++ GL+NG+LLR +N+ ++
Sbjct: 655 AHINHGL----FLNIGLQNGVLLRAVL------------------------DNVTGDLSD 686
Query: 812 TSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYT 871
T TR +G PV L +S ++A+S R WL T ++ T
Sbjct: 687 TR----------------TRYLGSRPVKLFRISMQGSDSVLAMSSRSWLSYTYQNRFHLT 730
Query: 872 SISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+S+ +A+ S +CP+GI+ ++ N+L +
Sbjct: 731 PLSYDTLEYASGFASEQCPEGIVAISTNTLRI 762
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVP 97
+ + + AHG+ +++ + +EL+ + G V ++ VFG I+ L +P
Sbjct: 10 RATGITHAAHGNFSGTKQQEIIVSRGKVLELLRPDPNTGKVHTLLTSEVFGVIRSL--MP 67
Query: 98 WNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRM 157
+ + KD +++ SDSG++ L + + F + Q G R G+
Sbjct: 68 FRLTGGS-------KDYIILGSDSGRIVILEYVASKNIFEKIQQETYGKSGCRRIVPGQQ 120
Query: 158 LAVDSSGCLIAVSAYEDRLGLFSLS 182
LA+D G + V A E + ++ L+
Sbjct: 121 LAIDPRGRAVMVGAVEKQKLVYILN 145
>gi|332030156|gb|EGI69950.1| DNA damage-binding protein 1 [Acromyrmex echinatior]
Length = 1138
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 199/487 (40%), Gaps = 108/487 (22%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMVLK-----EENGRLVYTSPIQ---NIAPILDMSVVD 478
P C + +++ + +GD ++K +ENG Y P++ N+API+DM+VVD
Sbjct: 311 PEC--ITYLDNGVIYVGSRLGDSQLIKLITKADENGS--YCVPMETFTNLAPIVDMAVVD 366
Query: 479 YHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSF 538
+ + QM C G EGSLRIIR+GI +++ + GI G W +++ S + +
Sbjct: 367 LERQGQGQMVTCSGAFKEGSLRIIRNGIGIQE--HASMDLPGIKGMWALKVGGSH-FDNT 423
Query: 539 LVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMV 598
LVLSFV +TR+L + + TD GF D T G V D L +QI +VRL +
Sbjct: 424 LVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTDDLFIQITSTSVRL-----I 478
Query: 599 AHSGGIPLSYPVCTSWFPEHV-SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIY 657
+H I V + W P++ +IS+ A ++ +T N F + + +I
Sbjct: 479 SHENKI-----VVSEWEPQNKRTISVVACNGTQVLCATGNDLFY-------IEIICNQIV 526
Query: 658 EMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSV 717
+ LQ E++C+ I SP+ V+ + + A+ I SV
Sbjct: 527 SKGFVTLQHEVACLDI-----------SPLDGVNEAKIVAVGLWTDI-----------SV 564
Query: 718 EVLSFVPKEGL-RVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRF 776
+L+ E + + L G I+ + + T G Y+L L +G + F
Sbjct: 565 RILTLPNLEEINKELLGGEIIPRSILMTCFEG------------NTYLLCALGDGSMYYF 612
Query: 777 EWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGIT 836
S + S + +G
Sbjct: 613 ILHRQSGMLSDKKKV----------------------------------------TLGTQ 632
Query: 837 PVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFV 896
P L ++ A SDRP ++ ++ H L +++++ + H + + P +
Sbjct: 633 PTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALA 692
Query: 897 AENSLNL 903
++++ +
Sbjct: 693 TDSTVTI 699
>gi|62318656|dbj|BAD95136.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
Length = 1088
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 181/439 (41%), Gaps = 92/439 (20%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLRI+R+GI + + + + QGI G W+
Sbjct: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ + + + +FLV+SF+ ETR+L + + + + T+ GF +V TL C LVQ+
Sbjct: 405 LKSSIDEAFDTFLVVSFISETRILAMNIEDELEETEIEGFLSEVQTLFCHDAVYNQLVQV 464
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T + + W P S+++ + ++++T ++
Sbjct: 465 TSNSVRLVSST----------TRELRNKWDAPAGFSVNVATANASQVLLATGGGHLVY-- 512
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + + E++H+ L+ E+SC+ I +PI N + L A +
Sbjct: 513 ----LEIGDGTLTEVKHVLLEYEVSCLDI-----------NPIG--DNPNYSQLAA---V 552
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYV 764
G I + L+ + KE L G I+ + + A G Y+
Sbjct: 553 GMWTDISVRIFVLPDLTLITKEEL----GGEIIPRSVLLCAFEGI------------SYL 596
Query: 765 LAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN 824
L L +G LL F+ TS + +D ++
Sbjct: 597 LCALGDGHLLNFQLD--------------------------------TSCGKLRDRKKVS 624
Query: 825 LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPV 884
L G P+ L S + A SDRP ++ + L Y+++S + +H P
Sbjct: 625 L--------GTRPITLRTFSSKSATHVFAASDRPAVIYSNNKKLLYSNVSLKEVSHMCPF 676
Query: 885 CSVECPKGILFVAENSLNL 903
S P + E L +
Sbjct: 677 NSAAFPDSLAIAREGELTI 695
>gi|224061051|ref|XP_002300334.1| predicted protein [Populus trichocarpa]
gi|222847592|gb|EEE85139.1| predicted protein [Populus trichocarpa]
Length = 1088
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 180/439 (41%), Gaps = 92/439 (20%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLRI+R+GI + + + + QGI G W+
Sbjct: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
+R DP+ +FLV+SF+ ETR+L + + + + T+ GF V TL C LVQ+
Sbjct: 405 LRSLTDDPFDTFLVVSFISETRILAMNIEDELEETEIEGFCSQVQTLFCHCAVFNQLVQV 464
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
++VRL T + + W P SI++ ++++T ++
Sbjct: 465 TSSSVRLVSST----------TRELRQEWNAPSGYSINVATANATQVLLATGGGHLVY-- 512
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + + + +H +L+ E+SC+ I +PI N + L A +
Sbjct: 513 ----LEIGDGTLTQAKHAQLECEISCLDI-----------NPIG--ENPNYSQLAA---V 552
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYV 764
G I S+ L+ + KE L G I+ + + + G Y+
Sbjct: 553 GMWTDISVRIFSLPDLNLITKEPL----GGEIIPRSVLLCSFEGIA------------YL 596
Query: 765 LAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN 824
L L +G LL F + S+ KD ++
Sbjct: 597 LCALGDGHLLNF--------------------------------LLNLSTGGLKDRKKVS 624
Query: 825 LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPV 884
L G P+ L S + A SDRP ++ ++ L Y++++ + +H P
Sbjct: 625 L--------GTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 676
Query: 885 CSVECPKGILFVAENSLNL 903
S P + E L++
Sbjct: 677 NSAAFPDSLAIAKEGELSI 695
>gi|297799958|ref|XP_002867863.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
lyrata]
gi|297313699|gb|EFH44122.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
lyrata]
Length = 1088
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 181/439 (41%), Gaps = 92/439 (20%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLRI+R+GI + + + + QGI G W+
Sbjct: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ + + + +FLV+SF+ ETR+L + + + + T+ GF V TL C LVQ+
Sbjct: 405 LKSSIDEAFDTFLVVSFISETRILAMNIEDELEETEIEGFLSQVQTLFCHDAVYNQLVQV 464
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T + + W P ++++ + ++++T ++
Sbjct: 465 TSNSVRLVSST----------TRELRNKWDAPAGFAVNVATANASQVLLATGGGHLVY-- 512
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + + E++H+ L+ E+SC+ I +PI N + L A +
Sbjct: 513 ----LEIGDGTLTEVKHVLLEYEVSCLDI-----------NPIG--DNPNYSQLAA---V 552
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYV 764
G I + L+ + KE L G I+ + + A G Y+
Sbjct: 553 GLWTDISVRIFVLPDLTLITKEQL----GGEIIPRSVLLCAFEGI------------SYL 596
Query: 765 LAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN 824
L L +G LL F+ TSS + +D ++
Sbjct: 597 LCALGDGHLLNFQLD--------------------------------TSSGKLRDRKKVS 624
Query: 825 LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPV 884
L G P+ L S + A SDRP ++ + L Y++++ + +H P
Sbjct: 625 L--------GTQPITLRTFSSKSATHVFAASDRPAVIYSNNKKLLYSNVNLKEVSHMCPF 676
Query: 885 CSVECPKGILFVAENSLNL 903
S P + E L +
Sbjct: 677 NSAAFPDSLAIAREGELTI 695
>gi|307205956|gb|EFN84082.1| Splicing factor 3B subunit 3 [Harpegnathos saltator]
Length = 1217
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 188/917 (20%), Positives = 337/917 (36%), Gaps = 199/917 (21%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L + + + HG+ +++ + S+EL+ + G V ++ VFG
Sbjct: 2 YLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFGI 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
++ L KD +VV SDSG++ L + + F V Q G
Sbjct: 62 VRSLMAFRLTGG---------TKDYIVVGSDSGRIVILEYIPAKNIFEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRI 209
R G+ LA+D G + + A E + ++ L+ + + ++ S E S + +
Sbjct: 113 RRIVPGQYLAIDPKGRAVMIGAIEKQKLVYILNRDA-----EARLTISSPLEAHKSNTLV 167
Query: 210 AQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISVL 269
+ + F + + +P + + L L +G N H +
Sbjct: 168 YHTVGVDVGFENPMFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLN---HVVRKY 224
Query: 270 SCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLP-PALEE 328
S E A+ +V VP PS V S N+L L +
Sbjct: 225 SEPLEEH--ANFLVSVPGG-------------------NDGPSGVLICSENYLTYKNLGD 263
Query: 329 QNFVDESC----RVHDVDDEGLFNVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSWSW 384
Q+ D C R +D+DD + C+ A +K + +
Sbjct: 264 QH--DIRCPIPRRRNDLDDPERGMIFVCS------------------ATHKTKSMFFFLA 303
Query: 385 EPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRF----L 440
+ E I K+ D I++ + D V S C+ K L+V F L
Sbjct: 304 QTEQGDIFKITLETDDDMVTEIKLKY-FDTVPVAASMCVLK----TGFLFVASEFGNHYL 358
Query: 441 SAFVEMGD---------GMVLKEENGRLVYTSPIQNI---------APILDMSVVDYHDE 482
+GD M L+E + P++N+ +PI+ V D +E
Sbjct: 359 YQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANE 418
Query: 483 KRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLS 542
Q++ CG P +LR++R G+ + ++ + + WTV+ +V + Y +++++S
Sbjct: 419 DTPQLYIACGRGPRSTLRVLRHGLEVSEMA-VSELPGNPNAVWTVKRRVDEEYDAYIIVS 477
Query: 543 FVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSG 602
FV T VL +G +VTDS GF TL+C + + LVQ++ + +R
Sbjct: 478 FVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSALGEDALVQVYPDGIR----------- 525
Query: 603 GIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHM 662
I V P +I AV ++++ + ++ + ++ Y +
Sbjct: 526 HIRADKRVNEWKAPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEY----TERK 581
Query: 663 RLQSELSCISIP----------------QKHPERRKSSSPISLVSNSSVPALPAGVIIGY 706
++ SE+ C+++ Q + R S P ++ S+ ALPA
Sbjct: 582 KMPSEVMCMALGNVAVGEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAA---- 637
Query: 707 TFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLA 766
E L ++ G N+ +A PQ L Y+
Sbjct: 638 -------------------ESLCIVEMGVKDADNSEDSA-----PQQSSL------YLNI 667
Query: 767 GLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQ 826
GL+NG+LLR + PIS +T
Sbjct: 668 GLQNGVLLR--------------TVLDPISGDLADTR----------------------- 690
Query: 827 LIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCS 886
TR +G PV L + + ++A+S R WL ++ T +S++ A+ S
Sbjct: 691 ---TRYLGSRPVKLFRIRMQGNQAVLAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSS 747
Query: 887 VECPKGILFVAENSLNL 903
+CP+GI+ ++ N+L +
Sbjct: 748 EQCPEGIVAISTNTLRI 764
>gi|47087273|ref|NP_998668.1| splicing factor 3B subunit 3 [Danio rerio]
gi|28502779|gb|AAH47171.1| Splicing factor 3b, subunit 3 [Danio rerio]
Length = 1217
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 189/449 (42%), Gaps = 83/449 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++PI+ + D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDEQESLSPIMSCQIADLANEDTPQLYVACGRGPGSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR V D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 EDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIIRCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSS--V 695
++ S ++ Y + + +++ C+S+ P E+R + LV N+ +
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRII 617
Query: 696 PALPAGVIIGYTFVIGTHRP-SVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV 754
P+ + +P S++ L P E L ++ G + + +G + C
Sbjct: 618 SLDPSDCL----------QPLSMQALPAQP-ESLCIVEMGGVEKQDELGEKGTICF---- 662
Query: 755 RLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSS 814
Y+ GL+NG+LLR + P++ +T
Sbjct: 663 -------LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR----------- 690
Query: 815 FESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSIS 874
TR +G PV L + ++A+S R WL + + T +S
Sbjct: 691 ---------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLS 735
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
++ +A+ S +CP+GI+ ++ N+L +
Sbjct: 736 YETLEYASGFASEQCPEGIVAISTNTLRI 764
>gi|15233515|ref|NP_193842.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
gi|73620956|sp|O49552.2|DDB1B_ARATH RecName: Full=DNA damage-binding protein 1b; AltName:
Full=UV-damaged DNA-binding protein 1b; Short=DDB1b
gi|110739453|dbj|BAF01636.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
gi|332659001|gb|AEE84401.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
Length = 1088
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 181/439 (41%), Gaps = 92/439 (20%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLRI+R+GI + + + + QGI G W+
Sbjct: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ + + + +FLV+SF+ ETR+L + + + + T+ GF +V TL C LVQ+
Sbjct: 405 LKSSIDEAFDTFLVVSFISETRILAMNIEDELEETEIEGFLSEVQTLFCHDAVYNQLVQV 464
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T + + W P S+++ + ++++T ++
Sbjct: 465 TSNSVRLVSST----------TRELRNKWDAPAGFSVNVATANASQVLLATGGGHLVY-- 512
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + + E++H+ L+ E+SC+ I +PI N + L A +
Sbjct: 513 ----LEIGDGTLTEVKHVLLEYEVSCLDI-----------NPIG--DNPNYSQLAA---V 552
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYV 764
G I + L+ + KE L G I+ + + A G Y+
Sbjct: 553 GMWTDISVRIFVLPDLTLITKEEL----GGEIIPRSVLLCAFEGI------------SYL 596
Query: 765 LAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN 824
L L +G LL F+ TS + +D ++
Sbjct: 597 LCALGDGHLLNFQLD--------------------------------TSCGKLRDRKKVS 624
Query: 825 LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPV 884
L G P+ L S + A SDRP ++ + L Y++++ + +H P
Sbjct: 625 L--------GTRPITLRTFSSKSATHVFAASDRPAVIYSNNKKLLYSNVNLKEVSHMCPF 676
Query: 885 CSVECPKGILFVAENSLNL 903
S P + E L +
Sbjct: 677 NSAAFPDSLAIAREGELTI 695
>gi|350410909|ref|XP_003489174.1| PREDICTED: DNA damage-binding protein 1-like [Bombus impatiens]
Length = 1141
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 192/468 (41%), Gaps = 106/468 (22%)
Query: 446 MGDGMVLK-----EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEG 497
+GD ++K +ENG Y P++ N+API+DM+VVD + + QM C G EG
Sbjct: 331 LGDSQLVKLITKADENGS--YCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEG 388
Query: 498 SLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFT 557
SLRIIR+GI +E+ + GI G W +++ + + + LVLSFV +TR+L +
Sbjct: 389 SLRIIRNGIGIEE--HASIDLPGIKGMWALKVGGGN-FDNTLVLSFVGQTRILTLNGEEV 445
Query: 558 DVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPE 617
+ TD GF D T G V + L +QI + RL ++H + V + W PE
Sbjct: 446 EETDIPGFVADEQTFHTGNVTNDLFIQITPTSARL-----ISHE-----TKTVVSEWEPE 495
Query: 618 HV-SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQK 676
+ +IS+ A ++ +T N F + +S +I LQ E++C+ I
Sbjct: 496 NKRTISVVACNGTQVLCATGNDLFY-------MEISCGQIVPKGFATLQYEVACLDI--- 545
Query: 677 HPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGL-RVLASGS 735
SP+ + + + A+ + TH SV +L+ E + + L G
Sbjct: 546 --------SPLDGHTEAKIAAVG----------LWTH-ISVRILTLPALEEINKELLGGE 586
Query: 736 IVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPI 795
I+ + + T G Y+L L +G + F + I S +
Sbjct: 587 IIPRSILMTCFEG------------NTYLLCALGDGSMYYFTLHKQNGILSDKKKV---- 630
Query: 796 SATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALS 855
+G P L ++ A S
Sbjct: 631 ------------------------------------TLGTQPTVLRTFRSLFTTNVFACS 654
Query: 856 DRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
DRP ++ ++ H L +++++ + H + + P + ++++ +
Sbjct: 655 DRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTI 702
>gi|2911067|emb|CAA17529.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
gi|7268907|emb|CAB79110.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
Length = 1102
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 181/439 (41%), Gaps = 92/439 (20%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLRI+R+GI + + + + QGI G W+
Sbjct: 361 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 418
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ + + + +FLV+SF+ ETR+L + + + + T+ GF +V TL C LVQ+
Sbjct: 419 LKSSIDEAFDTFLVVSFISETRILAMNIEDELEETEIEGFLSEVQTLFCHDAVYNQLVQV 478
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
N+VRL T + + W P S+++ + ++++T ++
Sbjct: 479 TSNSVRLVSST----------TRELRNKWDAPAGFSVNVATANASQVLLATGGGHLVY-- 526
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + + E++H+ L+ E+SC+ I +PI N + L A +
Sbjct: 527 ----LEIGDGTLTEVKHVLLEYEVSCLDI-----------NPIG--DNPNYSQLAA---V 566
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYV 764
G I + L+ + KE L G I+ + + A G Y+
Sbjct: 567 GMWTDISVRIFVLPDLTLITKEEL----GGEIIPRSVLLCAFEGI------------SYL 610
Query: 765 LAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN 824
L L +G LL F+ TS + +D ++
Sbjct: 611 LCALGDGHLLNFQLD--------------------------------TSCGKLRDRKKVS 638
Query: 825 LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPV 884
L G P+ L S + A SDRP ++ + L Y++++ + +H P
Sbjct: 639 L--------GTRPITLRTFSSKSATHVFAASDRPAVIYSNNKKLLYSNVNLKEVSHMCPF 690
Query: 885 CSVECPKGILFVAENSLNL 903
S P + E L +
Sbjct: 691 NSAAFPDSLAIAREGELTI 709
>gi|432863837|ref|XP_004070177.1| PREDICTED: splicing factor 3B subunit 3-like [Oryzias latipes]
Length = 1146
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 189/449 (42%), Gaps = 83/449 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV +N++PI+ + D +E Q++ CG P+ +LR++R G+ + ++ + +
Sbjct: 395 LVLVDEQENMSPIMSCQIADLANEDTPQLYVACGRGPKSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR V D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 EDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVRCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSS--V 695
++ S ++ Y + + +++ C+S+ P E+R + LV N+ +
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRII 617
Query: 696 PALPAGVIIGYTFVIGTHRP-SVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV 754
P+ + +P S++ L P E L ++ G + + +G +
Sbjct: 618 SLDPSDCL----------QPLSMQALPAQP-ESLCIVEMGGVEKQDELGEKGTMGF---- 662
Query: 755 RLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSS 814
Y+ GL+NG+LLR + P++ +T
Sbjct: 663 -------LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR----------- 690
Query: 815 FESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSIS 874
TR +G PV L + ++A+S R WL + + T +S
Sbjct: 691 ---------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLS 735
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
++ +A+ S +CP+GI+ ++ N+L +
Sbjct: 736 YETLEYASGFASEQCPEGIVAISTNTLRI 764
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 10/143 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG ++ L
Sbjct: 19 HGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTMEVFGIVRSLMAFRLTGG----- 73
Query: 107 SQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCL 166
KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 74 ----TKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQYLAVDPKGRA 129
Query: 167 IAVSAYEDRLGLFSLSMSSGSDI 189
+ + A E + ++ L+ + + +
Sbjct: 130 VMIGAIEKQKLVYILNRDAAARL 152
>gi|383863765|ref|XP_003707350.1| PREDICTED: DNA damage-binding protein 1-like [Megachile rotundata]
Length = 1138
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 188/467 (40%), Gaps = 104/467 (22%)
Query: 446 MGDGMVLK-----EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEG 497
+GD ++K +ENG Y P++ N+API+DM+VVD + + QM C G EG
Sbjct: 331 LGDSQLIKLITKADENGS--YCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEG 388
Query: 498 SLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFT 557
SLRIIR+GI +E+ + GI G W +R+ + + + LVLSFV +TR+L +
Sbjct: 389 SLRIIRNGIGIEE--HASIDLPGIKGMWALRIGGGN-FDNTLVLSFVGQTRILTLNGEEV 445
Query: 558 DVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPE 617
+ TD GF D T G V + L +QI + RL ++H + V + W PE
Sbjct: 446 EETDIPGFVADEQTFHTGNVTNDLFIQITPTSARL-----ISHE-----TKTVVSEWEPE 495
Query: 618 HV-SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQK 676
+ +IS+ A ++ +T N F + +S +I LQ E++C+ I
Sbjct: 496 NKRTISVVACNGTQVLCATGNDLFY-------MEISCGQIVPKGFATLQYEVACLDISPL 548
Query: 677 HPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI 736
+ + L ++ SV L P++E ++ + L G I
Sbjct: 549 DGNTEAKIAAVGLWTDISVRILTL--------------PALEEIN-------KELLGGEI 587
Query: 737 VLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPIS 796
+ + + T G Y+L L +G + F + I S +
Sbjct: 588 IPRSILMTCFEG------------NTYLLCALGDGSMYYFTLHKQNGILSDKKKV----- 630
Query: 797 ATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSD 856
+G P L ++ A SD
Sbjct: 631 -----------------------------------TLGTQPTVLRTFRSLSTINVFACSD 655
Query: 857 RPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
RP ++ ++ H L +++++ + H + + P + ++++ +
Sbjct: 656 RPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTI 702
>gi|428182571|gb|EKX51431.1| hypothetical protein GUITHDRAFT_134365 [Guillardia theta CCMP2712]
Length = 1295
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 181/432 (41%), Gaps = 73/432 (16%)
Query: 487 MFACCGVAPEGSLRIIRSGISLEKLLRTAP-IYQGITGTWTVRMKVSDPYHSFLVLSFVE 545
+ C G S+R +R G+ +E +R+ + GI G +T+ + SFL ++F
Sbjct: 486 VLVCSGTGKHASIRRLRYGLPVETHVRSEKGLCDGIVGLYTITFEQKHD-QSFLFMAFTT 544
Query: 546 ETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI-HQNAVRLCMPTMVAHS-GG 603
RVL VG +DVTD +G P TL +DG L+Q+ + + + P + +
Sbjct: 545 GCRVLTVGSELSDVTDDLGLNPTALTLHAAANSDGHLIQVSDEEVIVIQQPVLDSMDLDV 604
Query: 604 IPLSYPVCTSWFP-EHVSISLGAVAHNMIIVSTSNPCFLFILGVR--SLSVSHYEIY-EM 659
IP S P W P E IS+ A N+++ T + IL S ++I E+
Sbjct: 605 IPCSQPERAVWRPAESTKISVSASLGNLVMCCTCGGTSIHILDTTRDQGSAGEFQIRGEI 664
Query: 660 QHMRLQSELSCI---SIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPS 716
R E+SC+ S+ E RK IS++ + AL A + +G +
Sbjct: 665 TSFRSSEEVSCMAMTSLGAHGSETRK----ISII-GTYADALKARAGKIKIYSLGEEKRE 719
Query: 717 VEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLV--LADQFYVLAGLRNGMLL 774
VE+ + SI L G+ +SG +PQ ++ A +++ GLRNG ++
Sbjct: 720 VEL-------------AQSIDLGIYSGSDLSGSVPQSFGILPEPAGGVFLVVGLRNGKVI 766
Query: 775 RFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIG 834
F T N S LP+ + L TRR+
Sbjct: 767 IF-------------------------TLNALS-------------LPL-VGLGTTRRLA 787
Query: 835 ITPVFLVPLSDSLDADMIAL-SDRPWLLQTARHSLAYTSISFQPS--THATPVCSVECPK 891
+P+ V ++ +IAL D +L+ +R SL + I FQP +HA P CP
Sbjct: 788 ESPITFVSITSYAGPSLIALVEDVAFLVTPSRASLQFQRIGFQPGGISHAAPFICDACPL 847
Query: 892 GILFVAENSLNL 903
G+ V + L L
Sbjct: 848 GMAIVVDGQLKL 859
>gi|391341059|ref|XP_003744849.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Metaseiulus
occidentalis]
Length = 1223
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/482 (21%), Positives = 192/482 (39%), Gaps = 94/482 (19%)
Query: 436 EGRFLSAF-VEMGDGMV-LKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
E F S F +E GD L E LV + +++PI+ V D +E Q++A CG
Sbjct: 370 EPEFSSIFPLEEGDTFFFLPRELKNLVLVDEMDSLSPIMTARVADLTNEDTPQLYAACGR 429
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
P ++R++R G+ + ++ + + + WTV+ + D Y +++V+SF+ T VL +G
Sbjct: 430 GPRSTMRVLRHGLEVSEMA-VSELPGNPSAVWTVKKRADDEYDAYIVVSFINATLVLSIG 488
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
+VTDS GF TLAC + LVQI+ +R +
Sbjct: 489 ETVEEVTDS-GFLGTTPTLACHQIGHDALVQIYPEGIRHIRADRRVN------------E 535
Query: 614 WFPEHVSISLG-AVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCIS 672
W + + AV ++++ + ++ E+
Sbjct: 536 WRTSGKKLIVKCAVNQRQVVIALTGGELIYF-----------------------EMDSSG 572
Query: 673 IPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA 732
++ ER++ +S + ++ SV PAG +G+ +V V+S PK L +L+
Sbjct: 573 QLNEYAERKEMNSDVLCMALGSV---PAGEQRTKFLAVGSSDGTVHVISLDPKSCLSILS 629
Query: 733 SGSIVLTNTMGTAI---SGCIPQDVRLVLADQ--------FYVLAGLRNGMLLRFEWPPD 781
+ +N AI C + + ++ Y+ GL+NG+L R
Sbjct: 630 VQGMTESNPESLAIVELKACFLPSISVDMSGHEEGSGSSALYLNIGLQNGILKRM----- 684
Query: 782 SNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLV 841
+ ++ +T TR +G V L
Sbjct: 685 ---------VLDAVTGDMSDTR--------------------------TRFLGSRSVKLF 709
Query: 842 PLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSL 901
+ ++A+S R WL ++ T +S+ +A+ CS +CP+GI+ +A N+L
Sbjct: 710 KIKMQGTDAVLAMSSRCWLSYLFQNRFHLTPLSYDSLEYASGFCSEQCPEGIVAIAGNTL 769
Query: 902 NL 903
+
Sbjct: 770 RI 771
>gi|391341057|ref|XP_003744848.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Metaseiulus
occidentalis]
Length = 1211
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/471 (22%), Positives = 189/471 (40%), Gaps = 84/471 (17%)
Query: 436 EGRFLSAF-VEMGDGMV-LKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
E F S F +E GD L E LV + +++PI+ V D +E Q++A CG
Sbjct: 370 EPEFSSIFPLEEGDTFFFLPRELKNLVLVDEMDSLSPIMTARVADLTNEDTPQLYAACGR 429
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
P ++R++R G+ + ++ + + + WTV+ + D Y +++V+SF+ T VL +G
Sbjct: 430 GPRSTMRVLRHGLEVSEMA-VSELPGNPSAVWTVKKRADDEYDAYIVVSFINATLVLSIG 488
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
+VTDS GF TLAC + LVQI+ +R +
Sbjct: 489 ETVEEVTDS-GFLGTTPTLACHQIGHDALVQIYPEGIRHIRADRRVN------------E 535
Query: 614 WFPEHVSISLG-AVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCIS 672
W + + AV ++++ + ++ E+
Sbjct: 536 WRTSGKKLIVKCAVNQRQVVIALTGGELIYF-----------------------EMDSSG 572
Query: 673 IPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA 732
++ ER++ +S + ++ SV PAG +G+ +V V+S PK L +L+
Sbjct: 573 QLNEYAERKEMNSDVLCMALGSV---PAGEQRTKFLAVGSSDGTVHVISLDPKSCLSILS 629
Query: 733 SGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIH 792
+ +N AI + + Y+ GL+NG+L R +
Sbjct: 630 VQGMTESNPESLAIVDMSGHE-EGSGSSALYLNIGLQNGILKRM--------------VL 674
Query: 793 SPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMI 852
++ +T TR +G V L + ++
Sbjct: 675 DAVTGDMSDTR--------------------------TRFLGSRSVKLFKIKMQGTDAVL 708
Query: 853 ALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
A+S R WL ++ T +S+ +A+ CS +CP+GI+ +A N+L +
Sbjct: 709 AMSSRCWLSYLFQNRFHLTPLSYDSLEYASGFCSEQCPEGIVAIAGNTLRI 759
>gi|197246825|gb|AAI68883.1| Sf3b3 protein [Rattus norvegicus]
Length = 908
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 86 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 144
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 145 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 203
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 204 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 252
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 253 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 303
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 304 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 345
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 346 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 381
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 382 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 422
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 423 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 455
>gi|348503892|ref|XP_003439496.1| PREDICTED: splicing factor 3B subunit 3-like [Oreochromis
niloticus]
Length = 1217
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 186/453 (41%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV +N++PI+ + D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDEQENLSPIMSCQIADLANEDTPQLYVACGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR V D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 EDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVRCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + L N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLADN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLT--NTMGTAISGCIPQDVR 755
+V ++S P + L+ L+ ++ + + G QD
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQD-- 652
Query: 756 LVLADQ-----FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
L D+ Y+ GL+NG+LLR + P++ +T
Sbjct: 653 -ELGDKGTIGFLYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ +A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEYASGFASEQCPEGIVAISTNTLRI 764
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 10/152 (6%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVP 97
+ + + HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 10 RATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFGIIRSLMAFR 69
Query: 98 WNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRM 157
KD +VV SDSG++ L + + F + Q G R G+
Sbjct: 70 LTGG---------TKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF 120
Query: 158 LAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
LAVD G + + A E + ++ L+ + + +
Sbjct: 121 LAVDPKGRAVMIGAIEKQKLVYILNRDAAARL 152
>gi|340721347|ref|XP_003399083.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus terrestris]
gi|350406701|ref|XP_003487854.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus impatiens]
Length = 1217
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 187/917 (20%), Positives = 337/917 (36%), Gaps = 199/917 (21%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L + + + HG+ +++ + S+EL+ + G V ++ VFG
Sbjct: 2 YLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFGI 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +VV SDSG++ L + + F V Q G
Sbjct: 62 IRSLMAFRLTGG---------TKDYIVVGSDSGRIVILEYIPAKNVFEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRI 209
R G+ LA+D G + + A E + ++ L+ + ++ S E S + +
Sbjct: 113 RRIVPGQYLAIDPKGRAVMIGAIEKQKLVYILNRDP-----EARLTISSPLEAHKSNTLV 167
Query: 210 AQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISVL 269
+ + F + +++P + + L L +G N H +
Sbjct: 168 YHTVGVDVGFENPMFACLEIDYEEADNDPTGDAAVKTQQTLTLYELDLGLN---HVVRKY 224
Query: 270 SCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLP-PALEE 328
S E A+ +V VP PS V S N+L L +
Sbjct: 225 SEPLEEH--ANFLVSVPGG-------------------NDGPSGVLICSENYLTYKNLGD 263
Query: 329 QNFVDESC----RVHDVDDEGLFNVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSWSW 384
Q+ D C R +D+DD + C+ A +K + +
Sbjct: 264 QH--DIRCPIPRRRNDLDDPERGMIFVCS------------------ATHKTKSMFFFLA 303
Query: 385 EPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRF----L 440
+ E I K+ D I++ + D V S C+ K L+V F L
Sbjct: 304 QTEQGDIFKITLETDEDMVTEIKLKY-FDTVPVAASMCVLK----TGFLFVASEFGNHYL 358
Query: 441 SAFVEMGD---------GMVLKEENGRLVYTSPIQNI---------APILDMSVVDYHDE 482
+GD M L+E + P++N+ +PI+ V D +E
Sbjct: 359 YQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANE 418
Query: 483 KRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLS 542
+++ CG P +LR++R G+ + ++ + + WTV+ +V + Y +++++S
Sbjct: 419 DTPELYITCGRGPRSTLRVLRHGLEVSEMA-VSELPGNPNAVWTVKRRVDEEYDAYIIVS 477
Query: 543 FVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSG 602
FV T VL +G +VTDS GF TL+C + + LVQ++ + +R
Sbjct: 478 FVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSALGEDALVQVYPDGIR----------- 525
Query: 603 GIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHM 662
I V P +I AV ++++ + ++ + ++ Y +
Sbjct: 526 HIRADKRVNEWKAPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEY----TERK 581
Query: 663 RLQSELSCISIP----------------QKHPERRKSSSPISLVSNSSVPALPAGVIIGY 706
++ SE+ C+++ Q + R S P ++ S+ ALPA
Sbjct: 582 KMPSEVMCMALGNVAVGEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAA---- 637
Query: 707 TFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLA 766
E L ++ G+ N+ + PQ L Y+
Sbjct: 638 -------------------ESLCIVEMGAKDANNSEDLS-----PQQSSL------YLNI 667
Query: 767 GLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQ 826
GL+NG+LLR + PIS +T
Sbjct: 668 GLQNGVLLR--------------TVLDPISGDLADTR----------------------- 690
Query: 827 LIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCS 886
TR +G PV L + + ++A+S R WL ++ T +S++ A+ S
Sbjct: 691 ---TRYLGSRPVKLFRIKMQGNQAVLAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSS 747
Query: 887 VECPKGILFVAENSLNL 903
+CP+GI+ ++ N+L +
Sbjct: 748 EQCPEGIVAISTNTLRI 764
>gi|326927039|ref|XP_003209702.1| PREDICTED: splicing factor 3B subunit 3-like [Meleagris gallopavo]
gi|363738006|ref|XP_001232348.2| PREDICTED: splicing factor 3B subunit 3 [Gallus gallus]
Length = 1217
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILCCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR V D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQYLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|356536504|ref|XP_003536777.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 194/454 (42%), Gaps = 96/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++ PI+DM V + +E+ Q++ CG P SLRI+R+G+++ ++
Sbjct: 393 LVRIDQVESLMPIMDMKVSNLFEEETPQIYTLCGRGPRSSLRILRTGLAVSEM--AVSKL 450
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
GI + WTV+ V D + +++V+SF T VL +G +V+DS GF +LA L+
Sbjct: 451 PGIPSAVWTVKKNVIDEFDAYIVVSFTNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSIS-LGAVAHNMIIVST 635
D L+Q+H N +R + G I W P SIS +G+ ++I +
Sbjct: 510 GDDSLMQVHPNGIR-----HIREDGRI-------NEWRTPGKRSISKVGSNTLQVVIALS 557
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
F + V ++ E++ + +++C+ I PE R+ S ++
Sbjct: 558 GGELIYFEMDVTG------QLMEVEKHEMSGDVACLDIAPV-PEGRQRSRFLA------- 603
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGC 749
+G++ ++ +LS P + ++ L+ S+ +L + ++ G
Sbjct: 604 --------------VGSYDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGE 649
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
D L ++ AGL+NG++ FR ++ +G
Sbjct: 650 DGADHPASL----FLNAGLQNGVM-------------------------FRTVVDMVTGQ 680
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
+ S +R +G+ L P+ M+ LS RPWL +
Sbjct: 681 LSDSR---------------SRFLGLRAPKLFPIIVRGKRAMLCLSSRPWLGYIHQGHFL 725
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ +A S +C +G++ VA +L +
Sbjct: 726 LTPLSYETLEYAASFSSDQCVEGVVAVAGEALRI 759
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNS 107
+G+ S ++V + ++L+ ++G +Q++ +FG I+ LA +F +
Sbjct: 19 NGNFSGGKSQEIVVARGKVLDLLRPDDNGRIQTILSVEIFGAIRSLA------QFRLMGA 72
Query: 108 QVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLI 167
Q KD +VV SDSG++ L + E + F + Q G R G+ LA+D G +
Sbjct: 73 Q---KDYIVVGSDSGRIIILEYNKEKNVFDKIHQETFGKSGCRRIVPGQYLAIDPKGRAV 129
Query: 168 AVSAYEDRLGLFSLSMSSGS 187
+ A E + ++ L+ + +
Sbjct: 130 MIGACEKQKLVYVLNRDTAA 149
>gi|168064351|ref|XP_001784126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664326|gb|EDQ51050.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1214
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 190/455 (41%), Gaps = 98/455 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I+++ PI+DM V + +E+ Q+F+ CG P SLRI+R G+++ ++ +P+
Sbjct: 394 LVQIDDIESLMPIMDMKVANLFEEETPQIFSLCGRGPRSSLRILRPGLAVTEMA-VSPLP 452
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WTV+ +D + +++V+SFV T VL +G +V+DS GF +LA L+
Sbjct: 453 GVPSAVWTVKKHANDEFDAYIVVSFVNATLVLSIGETVEEVSDS-GFLDTTPSLAISLLG 511
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D L+Q+H + +R + P + + +G ++I +
Sbjct: 512 DDSLMQVHPSGIRHIRADGRINEWKTPGKKTI----------VKVGYNRMQVVIALSGGE 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
F + + ++ E++ + +++C+ I PE R+ S ++
Sbjct: 562 LIYFEMDMSG------QLMEIEKRDMTGDVACLDIAPV-PEGRQRSRFLA---------- 604
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIV----------LTNTMGTAISG 748
+G++ ++ +LS P + +++L+ ++ + + G
Sbjct: 605 -----------VGSYDSTIRILSLDPDDCMQILSVQAVSSPPESLLLLEVQASTGGEDGA 653
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
P V ++ AGL+NG+LLR E ++ +T G
Sbjct: 654 DHPASV--------FLNAGLQNGVLLRTEV--------------DMVTGQLSDTRTRFLG 691
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
+ A F + L+ RR M+ LS RPWL +
Sbjct: 692 LRAPKLFSA---------LVRGRRA-----------------MLCLSSRPWLGYIHQGHF 725
Query: 869 AYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ +A S +C +G++ VA ++L +
Sbjct: 726 LLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRV 760
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNS 107
+G+ + ++V + ++L+ ++G +Q++ VFG I+ LA +F S
Sbjct: 19 YGNFTGGKTQEIVVARGKVLDLLRPDDNGKLQTLLSVEVFGAIRSLA------QFRLTGS 72
Query: 108 QVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLI 167
Q KD +VV SDSG++ L + E + F V Q G R G+ LAVD G +
Sbjct: 73 Q---KDYIVVGSDSGRIVILEYNKEKNLFEKVHQETFGKSGCRRIVPGQYLAVDPKGRAV 129
Query: 168 AVSAYEDRLGLFSLSMSSGS 187
+ A E + ++ L+ + +
Sbjct: 130 MIGACEKQKLVYVLNRDNAA 149
>gi|6006515|emb|CAB56791.1| spliceosomal protein SAP 130 [Homo sapiens]
Length = 1217
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|351712542|gb|EHB15461.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]
Length = 1240
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 376 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 434
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 435 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 493
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 494 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 542
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 543 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 593
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 594 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 635
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 636 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 671
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 672 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 712
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 713 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 745
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|224064143|ref|XP_002188384.1| PREDICTED: splicing factor 3B subunit 3 [Taeniopygia guttata]
Length = 1217
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILCCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR V D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 10/143 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTGG----- 73
Query: 107 SQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCL 166
KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 74 ----TKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQYLAVDPKGRA 129
Query: 167 IAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 130 VMISAIEKQKLVYILNRDAAARL 152
>gi|46362557|gb|AAH68974.1| Splicing factor 3b, subunit 3, 130kDa [Homo sapiens]
Length = 1217
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|432114152|gb|ELK36185.1| Splicing factor 3B subunit 3 [Myotis davidii]
Length = 1217
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|410297890|gb|JAA27545.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
Length = 1217
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
>gi|40788938|dbj|BAA32662.2| KIAA0017 protein [Homo sapiens]
Length = 1253
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 431 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 489
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 490 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 548
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 549 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 597
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 598 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 648
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 649 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 690
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 691 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 726
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 727 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 767
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 768 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 800
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 55 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 104
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 105 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 163
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 164 RAVMISAIEKQKLVYILNRDAAARL 188
>gi|54112121|ref|NP_036558.3| splicing factor 3B subunit 3 [Homo sapiens]
gi|118150814|ref|NP_001071319.1| splicing factor 3B subunit 3 [Bos taurus]
gi|296231541|ref|XP_002761182.1| PREDICTED: splicing factor 3B subunit 3 isoform 2 [Callithrix
jacchus]
gi|332846357|ref|XP_511081.3| PREDICTED: splicing factor 3B subunit 3 [Pan troglodytes]
gi|397518709|ref|XP_003829523.1| PREDICTED: splicing factor 3B subunit 3 [Pan paniscus]
gi|402908991|ref|XP_003917214.1| PREDICTED: splicing factor 3B subunit 3 [Papio anubis]
gi|403298333|ref|XP_003939977.1| PREDICTED: splicing factor 3B subunit 3 [Saimiri boliviensis
boliviensis]
gi|426382761|ref|XP_004057969.1| PREDICTED: splicing factor 3B subunit 3 [Gorilla gorilla gorilla]
gi|116242787|sp|Q15393.4|SF3B3_HUMAN RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=STAF130; AltName:
Full=Spliceosome-associated protein 130; Short=SAP 130
gi|125987788|sp|A0JN52.1|SF3B3_BOVIN RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|117306205|gb|AAI26519.1| Splicing factor 3b, subunit 3, 130kDa [Bos taurus]
gi|119572190|gb|EAW51805.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_c [Homo sapiens]
gi|168274284|dbj|BAG09562.1| splicing factor 3B subunit 3 [synthetic construct]
gi|296478233|tpg|DAA20348.1| TPA: splicing factor 3B subunit 3 [Bos taurus]
gi|355710371|gb|EHH31835.1| Spliceosome-associated protein 130 [Macaca mulatta]
gi|355756944|gb|EHH60552.1| Spliceosome-associated protein 130 [Macaca fascicularis]
gi|380811142|gb|AFE77446.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|383417057|gb|AFH31742.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|384946118|gb|AFI36664.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|410209986|gb|JAA02212.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
gi|410260956|gb|JAA18444.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
gi|410355121|gb|JAA44164.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
Length = 1217
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|395836972|ref|XP_003791420.1| PREDICTED: splicing factor 3B subunit 3 [Otolemur garnettii]
Length = 1217
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|31213215|ref|XP_315551.1| AGAP005549-PA [Anopheles gambiae str. PEST]
gi|21299714|gb|EAA11859.1| AGAP005549-PA [Anopheles gambiae str. PEST]
Length = 1217
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 113/519 (21%), Positives = 199/519 (38%), Gaps = 95/519 (18%)
Query: 392 PKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAF-VEMGDGM 450
P CV F + FG+ +L + + G E F SA +E GD
Sbjct: 335 PATAMCVLKTGFLFVACEFGNH----YLYQIAHLGDDDD-----EPEFSSAMPLEEGDTF 385
Query: 451 VLK-EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLE 509
+ LV I + APIL V D +E Q++ CG P S+R++R G+ +
Sbjct: 386 FFAPRQLKNLVMVDDIPSYAPILGCQVADLANEDTPQLYLACGRGPRSSIRVLRHGLEVS 445
Query: 510 KLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
++ + + WTV+ ++ D + +++++SFV T VL +G +VTDS GF
Sbjct: 446 EMA-VSELPGNPNAVWTVKKRIDDEFDAYIIVSFVNATLVLSIGDTVEEVTDS-GFLGTT 503
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHN 629
TL C + D LVQ++ + +R I V P +I AV
Sbjct: 504 PTLCCSALGDDALVQVYPDGIR-----------HIRADKRVNEWKAPGKKTIMKCAVNQR 552
Query: 630 MIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISL 689
++++ S ++ E+ ++ ER+K S +
Sbjct: 553 QVVIALSGGELVYF-----------------------EMDPTGQLNEYTERKKMPSEVMC 589
Query: 690 VSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGSIVLTNTMGT 744
++ SV P+G + +G +V ++S P + ++ L S + L
Sbjct: 590 MALGSV---PSGEQRSWFLAVGLADNTVRIISLDPTDCLSPRSMQALPSAAESLCIVEMG 646
Query: 745 AISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTEN 804
+ D + Y+ GL NG+LLR + P+S +T
Sbjct: 647 TVETSSEDDGVTITTGCIYLNIGLTNGVLLR--------------TVLDPVSGDLADTR- 691
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA 864
TR +G PV L + ++A+S R WL
Sbjct: 692 -------------------------TRYLGSRPVKLFRIQMQGSEAVLAMSSRSWLSYYY 726
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 727 QNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 765
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 11/156 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL +L + + + HG +++ K +ELV + G V ++ + VFG
Sbjct: 2 YLYNFILQRATGITHAVHGSFAGTKLQEILLAKGKGLELVRPDPNTGKVHTLLQTEVFGV 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
++ L F KD V+ SDSG++ L + ++ V Q G
Sbjct: 62 VRSLM------SFRLTGGS---KDYAVIGSDSGRIVILEYNPAKNQLEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
R G+ LA+D G + + A E + ++ L+ S
Sbjct: 113 RRIVPGQYLAIDPKGRAVMIGAVEKQKLVYILNRDS 148
>gi|47212603|emb|CAF93045.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1171
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 183/446 (41%), Gaps = 77/446 (17%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++PI+ + D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDEQESLSPIMSCQIADLANEDTPQLYVACGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR V D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVRCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + L N+
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLADNTV--- 614
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLV 757
II S++ L P E L ++ G + + +G S
Sbjct: 615 ----RIISLDPSDCLQPLSMQALPAQP-ESLCIVEMGGVEKQDELGEKASIGF------- 662
Query: 758 LADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFES 817
Y+ GL+NG+LLR + P++ +T
Sbjct: 663 ----LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR-------------- 690
Query: 818 KDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQP 877
TR +G PV L + ++A+S R WL + + T +S++
Sbjct: 691 ------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYET 738
Query: 878 STHATPVCSVECPKGILFVAENSLNL 903
+A+ S +CP+GI+ ++ N+L +
Sbjct: 739 LEYASGFASEQCPEGIVAISTNTLRI 764
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 11/160 (6%)
Query: 32 YLAKCVLKGSV-VLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
+L L+ S + HG+ ++V + +EL+ + G V ++ VFG
Sbjct: 2 FLYNITLQRSTGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTMEVFGI 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +V+ SDSG++ L + + F + Q G
Sbjct: 62 IRSLMAFRLTGG---------TKDYIVIGSDSGRIVILEYSPSKNMFEKIHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
R G+ LAVD G + + A E + ++ L+ + + +
Sbjct: 113 RRIVPGQFLAVDPKGRAVMIGAIEKQKLVYILNRDAAARL 152
>gi|19527174|ref|NP_598714.1| splicing factor 3B subunit 3 [Mus musculus]
gi|297207121|ref|NP_001099657.2| splicing factor 3B subunit 3 [Rattus norvegicus]
gi|354477789|ref|XP_003501101.1| PREDICTED: splicing factor 3B subunit 3 [Cricetulus griseus]
gi|81879817|sp|Q921M3.1|SF3B3_MOUSE RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|15030278|gb|AAH11412.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|26353236|dbj|BAC40248.1| unnamed protein product [Mus musculus]
gi|27503728|gb|AAH42580.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|148679525|gb|EDL11472.1| splicing factor 3b, subunit 3 [Mus musculus]
gi|187951307|gb|AAI39016.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|187954163|gb|AAI39017.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|344248014|gb|EGW04118.1| Splicing factor 3B subunit 3 [Cricetulus griseus]
Length = 1217
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|73957045|ref|XP_536791.2| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Canis lupus
familiaris]
gi|149699332|ref|XP_001500880.1| PREDICTED: splicing factor 3B subunit 3 [Equus caballus]
gi|301771131|ref|XP_002920989.1| PREDICTED: splicing factor 3B subunit 3-like [Ailuropoda
melanoleuca]
gi|344290794|ref|XP_003417122.1| PREDICTED: splicing factor 3B subunit 3-like [Loxodonta africana]
gi|410983914|ref|XP_003998280.1| PREDICTED: splicing factor 3B subunit 3 [Felis catus]
gi|426242169|ref|XP_004014947.1| PREDICTED: splicing factor 3B subunit 3 [Ovis aries]
gi|417406150|gb|JAA49749.1| Putative damage-specific dna binding complex subunit ddb1 [Desmodus
rotundus]
gi|431912451|gb|ELK14585.1| Splicing factor 3B subunit 3 [Pteropus alecto]
Length = 1217
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|91092128|ref|XP_972649.1| PREDICTED: similar to AGAP005549-PA [Tribolium castaneum]
gi|270004662|gb|EFA01110.1| hypothetical protein TcasGA2_TC010322 [Tribolium castaneum]
Length = 1219
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 189/477 (39%), Gaps = 90/477 (18%)
Query: 436 EGRFLSAF-VEMGDGMVLKEENGR-LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
E F SA +E GD + R LV +++++PIL V D E Q++ CG
Sbjct: 370 ELEFSSAMPLEEGDTFFFAPRSLRNLVLVDEMESLSPILSCRVADLAGEDTPQLYMLCGR 429
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
P SLR++R G+ + ++ + + WTV+ + D Y +++++SFV T VL +G
Sbjct: 430 GPRSSLRVLRHGLEVSEMA-VSELPGNPNAVWTVKRRSDDEYDAYIIVSFVNATLVLSIG 488
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVR-LCMPTMVAHSGGIPLSYPVCT 612
+VTDS GF TL+C ++D LVQ++ +R +C V
Sbjct: 489 ETVEEVTDS-GFLGTTPTLSCSALSDDALVQVYPGGIRHICSDKRV-------------N 534
Query: 613 SW-FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCI 671
W P +I A+ ++++ S + + + Y+ + R+ +++ C+
Sbjct: 535 EWKAPGKKTIVKCAINQRQVVIALSGGELAYFEMDPTGQLHEYK----ERKRMNADVVCM 590
Query: 672 SIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVL 731
++ P G + +G +V ++S P + L
Sbjct: 591 ALANVAP----------------------GEQLSLFLAVGLADSTVRIISLDPSDCLAPR 628
Query: 732 A-SGSIVLTNTMGTAISGCIPQDVRLVLA----DQFYVLAGLRNGMLLRFEWPPDSNIPS 786
+ G V ++ GC ++ A Y+ GL NG LLR
Sbjct: 629 SIQGLPVCAESLCIVEMGCTDREPDNAAAASTTSTLYLNIGLTNGALLR----------- 677
Query: 787 SVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDS 846
+ P+S +T TR +G PV L +
Sbjct: 678 ---NVLDPVSGELSDTR--------------------------TRYLGSRPVKLFRIRMQ 708
Query: 847 LDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++A+S R WL + T +S++ +A+ S +CP+GI+ ++ N+L +
Sbjct: 709 QSEAVLAMSSRSWLSYYYQSRFYLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRI 765
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 11/146 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L + + + HG+ ++V + S+E++ + G V ++ +FG
Sbjct: 2 YLYNLTLQRATAITHAIHGNFSGTKMQEIVISRGKSLEVLRPDPNTGKVHTLLTVEIFGV 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
++ L F KD ++V SDSG++ L + + F V Q G
Sbjct: 62 VRSLM------SFRLTGGT---KDFVIVGSDSGRIVILEYIPSKNNFEKVHQETFGKSGV 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDR 175
R G+ LA D G + + A E +
Sbjct: 113 RRIVPGQYLATDPRGRAVMIGAVEKQ 138
>gi|158256968|dbj|BAF84457.1| unnamed protein product [Homo sapiens]
Length = 1217
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E++ ++ L+ + + +
Sbjct: 128 RAVMISAIEEQKLVYILNRDAAARL 152
>gi|109129162|ref|XP_001107025.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Macaca
mulatta]
gi|297284421|ref|XP_002802591.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Macaca
mulatta]
Length = 1199
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 377 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 435
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 436 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 494
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 495 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 543
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 544 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 595 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 636
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 637 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 672
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 673 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 713
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 714 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 746
Score = 39.7 bits (91), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 14/138 (10%)
Query: 53 SPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMG 111
P ++V + +EL+ + G V ++ VFG I+ L ++ G
Sbjct: 6 EPNQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF-----------RLTG 54
Query: 112 --KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAV 169
KD +VV SDSG++ L + + F + Q G R G+ LAVD G + +
Sbjct: 55 GTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMI 114
Query: 170 SAYEDRLGLFSLSMSSGS 187
SA E + ++ L+ + +
Sbjct: 115 SAIEKQKLVYILNRDAAA 132
>gi|449282569|gb|EMC89402.1| Splicing factor 3B subunit 3 [Columba livia]
Length = 1225
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 184/452 (40%), Gaps = 89/452 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILCCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR V D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ E+ + ++ ER++ S+ + +S ++V
Sbjct: 562 ELVYF-----------------------EMDPVGQLNEYTERKEMSADVVCMSLANV--- 595
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCIP 751
P G +G +V ++S P + L+ L+ S+ + GT +
Sbjct: 596 PPGEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELG 655
Query: 752 QDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAA 811
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 656 ERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR-------- 690
Query: 812 TSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYT 871
TR +G PV L + ++A+S R WL + + T
Sbjct: 691 ------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLT 732
Query: 872 SISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 733 PLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 10/143 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTGG----- 73
Query: 107 SQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCL 166
KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 74 ----TKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQYLAVDPKGRA 129
Query: 167 IAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 130 VMISAIEKQKLVYILNRDAAARL 152
>gi|74190887|dbj|BAE28225.1| unnamed protein product [Mus musculus]
Length = 937
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 10/143 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTGG----- 73
Query: 107 SQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCL 166
KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 74 ----TKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRA 129
Query: 167 IAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 130 VMISAIEKQKLVYILNRDAAARL 152
>gi|300120114|emb|CBK19668.2| unnamed protein product [Blastocystis hominis]
Length = 1240
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 186/456 (40%), Gaps = 100/456 (21%)
Query: 456 NGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTA 515
N R V T P +++P++ + D + Q+FA CG + L++++ G+++ LL
Sbjct: 412 NLRPVDTLP--SLSPLVKIHAEDLRGDGTPQLFALCGRSSRSQLKVLQQGLAI-SLLSQN 468
Query: 516 PIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG 575
P+ +G WT+R H F+V+SF T VL VG + V D+ GF+ D TLA G
Sbjct: 469 PLPYAPSGLWTLR-DARTGQHRFMVISFNNATIVLAVGKSVEQVMDT-GFKLDESTLATG 526
Query: 576 LVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVST 635
++ +Q++ R + G + P P SI+ A+ I+V+
Sbjct: 527 VLEGNSFLQVYPGGFR-----QIFEDGHTKVWEP------PSRRSITAAAMNLRQIVVAL 575
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
SN L+ L E E + M + E+ C+ +P P ++
Sbjct: 576 SNGEVLYFELDERL-----EWVERESMNHREEVICLDLPALAPNSLRA------------ 618
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPK--------EGLRVLASGSIVLTNTMGTAIS 747
P L +G S V S P + L + S + T MG S
Sbjct: 619 PFL----------AVGYGDRSCRVYSLAPNSLLEELSMQALNAMPSNLTLDTMRMG---S 665
Query: 748 GCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRS 807
G + ++ L + G+ NG+L+R E V P+ +S N RS
Sbjct: 666 GSLARETLL-------LTVGMENGILMRVE----------VDPVSGKLS-------NARS 701
Query: 808 GIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHS 867
TR +G PV L + + ++ALS +PWL A ++
Sbjct: 702 ----------------------TRFLGPRPVRLFKILAGGNPCVLALSVKPWLCYCANNT 739
Query: 868 LAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
L TS+ P A P C+ +C +GI+ VA +LN+
Sbjct: 740 LTLTSLVSDPLDLAAPFCNEDCSEGIVCVAGTNLNI 775
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 30 IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGT 89
+H + K S V +V +G+ S + V + IEL ++G + +C V+G
Sbjct: 1 MHLYNLTLHKASSVQRVIYGNFSSAKVEEFVISRGNIIELWRPDDNGNINVICSFEVYGL 60
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ A+ P+ + + N+ D +++ SDSG++ L + E + F + Q G
Sbjct: 61 IR--ALKPF--RLSGNNT-----DFVLIGSDSGRIVVLKYDTEKNTFEKIHQETFGKVGV 111
Query: 150 SRHQLGRMLAVDSSGCLIAVSAY 172
R G+ LAVD +G +S +
Sbjct: 112 IRGLPGQYLAVDPNGRAFMISGF 134
>gi|332263858|ref|XP_003280968.1| PREDICTED: splicing factor 3B subunit 3 [Nomascus leucogenys]
Length = 1271
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 449 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 507
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 508 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 566
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 567 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 615
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 616 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 666
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 667 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 708
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 709 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 744
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 745 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 785
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 786 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 818
>gi|334313376|ref|XP_003339894.1| PREDICTED: splicing factor 3B subunit 3-like [Monodelphis
domestica]
Length = 1202
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 186/453 (41%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 380 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 438
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 439 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 497
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 498 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 546
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 547 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 597
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLT--NTMGTAISGCIPQDVR 755
+V ++S P + L+ L+ ++ + + G QD
Sbjct: 598 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQD-- 637
Query: 756 LVLADQ-----FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
L ++ Y+ GL+NG+LLR + P++ +T
Sbjct: 638 -ELGERGSIGFLYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 675
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 676 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 716
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 717 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 749
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V +E +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSREKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|168045572|ref|XP_001775251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673464|gb|EDQ59987.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1201
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 190/455 (41%), Gaps = 98/455 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I+++ PI+DM V + +E+ Q+F+ CG P SLRI+R G+++ ++ +P+
Sbjct: 381 LVQIDDIESLMPIMDMKVANIFEEETPQIFSLCGRGPRSSLRILRPGLAVTEMA-VSPLP 439
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WTV+ +D + +++V+SFV T VL +G +V+DS GF +LA L+
Sbjct: 440 GVPSAVWTVKKHANDEFDAYIVVSFVNATLVLSIGETVEEVSDS-GFLDTTPSLAISLLG 498
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D L+Q+H + +R + P + + +G ++I +
Sbjct: 499 DDSLMQVHPSGIRHIRSDGRINEWKTPGKKTI----------VKVGYNRMQVVIALSGGE 548
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
F + + ++ E++ + +++C+ I PE R+ S ++
Sbjct: 549 LIYFEMDMSG------QLMEIEKRDMTGDVACLDIAPV-PEGRQRSRFLA---------- 591
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIV----------LTNTMGTAISG 748
+G++ ++ +LS P + +++L+ ++ + + G
Sbjct: 592 -----------VGSYDSTIRILSLDPDDCMQILSVQAVSSPPESLLLLEVQASTGGEDGA 640
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
P V ++ AGL+NG+LLR E ++ +T G
Sbjct: 641 DHPASV--------FLNAGLQNGVLLRTEV--------------DMVTGQLSDTRTRFLG 678
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
+ A F + L+ RR M+ LS RPWL +
Sbjct: 679 LRAPKLFSA---------LVRGRRA-----------------MLCLSSRPWLGYIHQGHF 712
Query: 869 AYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ +A S +C +G++ VA ++L +
Sbjct: 713 LLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRV 747
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 32 YLAKCVLKGSV-VLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
YL L+ + ++ +G+ + ++V + ++L+ ++G +Q++ +FG I
Sbjct: 2 YLYSLTLQSATGIVCATYGNFTGGKTQEIVVARGKVLDLLRPDDNGKLQTMLSVEIFGAI 61
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
+VV SDSG++ L + E + F V Q G
Sbjct: 62 H----------------------YIVVGSDSGRIVILEYNKEKNLFEKVHQETFGKSGCR 99
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGS 187
R G+ LAVD G + +SA E + ++ L+ + +
Sbjct: 100 RIVPGQYLAVDPKGRAVMISACEKQKLVYVLNRDNAA 136
>gi|193786710|dbj|BAG52033.1| unnamed protein product [Homo sapiens]
Length = 897
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 75 LVLVDELDSLSPILFCQMADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 133
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 134 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 192
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 193 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 241
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 242 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 292
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 293 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 334
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 335 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 370
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 371 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 411
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 412 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 444
>gi|37359734|dbj|BAC97845.1| mKIAA0017 protein [Mus musculus]
Length = 1122
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 10/143 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTGG----- 73
Query: 107 SQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCL 166
KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 74 ----TKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRA 129
Query: 167 IAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 130 VMISAIEKQKLVYILNRDAAARL 152
>gi|149640712|ref|XP_001506454.1| PREDICTED: splicing factor 3B subunit 3 [Ornithorhynchus anatinus]
gi|395508661|ref|XP_003758628.1| PREDICTED: splicing factor 3B subunit 3 [Sarcophilus harrisii]
Length = 1217
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 186/453 (41%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLT--NTMGTAISGCIPQDVR 755
+V ++S P + L+ L+ ++ + + G QD
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQD-- 652
Query: 756 LVLADQ-----FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
L ++ Y+ GL+NG+LLR + P++ +T
Sbjct: 653 -ELGERGSIGFLYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|307205760|gb|EFN83990.1| DNA damage-binding protein 1 [Harpegnathos saltator]
Length = 1138
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 190/468 (40%), Gaps = 106/468 (22%)
Query: 446 MGDGMVLK-----EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEG 497
+GD ++K +ENG Y P++ N+API+DM+VVD + + QM C G EG
Sbjct: 328 LGDSQLIKLITKADENGS--YCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEG 385
Query: 498 SLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFT 557
SLRIIR+GI +++ + GI G W +++ + + + LVLSFV +TR+L +
Sbjct: 386 SLRIIRNGIGIQE--HASIDLPGIKGMWALKVGGGN-FDNTLVLSFVGQTRILTLNGEEV 442
Query: 558 DVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPE 617
+ TD GF D T G V + L +QI + RL ++H I V + W PE
Sbjct: 443 EETDIPGFVADEQTFHTGNVTNDLFIQITPTSARL-----ISHETKI-----VVSEWEPE 492
Query: 618 HV-SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQK 676
+ +IS+ A ++ +T N F + + +I LQ E++C+ I
Sbjct: 493 NKRTISVVACNGTQVLCATGNDLFY-------MEIICNQIVPKGFATLQHEVACLDI--- 542
Query: 677 HPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGL-RVLASGS 735
SP+ +S + + A+ I SV +L+ E + + L G
Sbjct: 543 --------SPLDGISEAKIVAVGLWTDI-----------SVRILTLPGLEEINKELLGGE 583
Query: 736 IVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPI 795
I+ + + T G Y+L L +G + F + I S +
Sbjct: 584 IIPRSILMTCFEG------------NTYLLCALGDGSMYYFTLHKQNGILSDKKKV---- 627
Query: 796 SATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALS 855
+G P L ++ A S
Sbjct: 628 ------------------------------------TLGTQPTVLRTFRSLSTTNVFACS 651
Query: 856 DRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
DRP ++ ++ H L +++++ + H + + P + ++++ +
Sbjct: 652 DRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTI 699
>gi|311247551|ref|XP_003122699.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Sus scrofa]
Length = 1140
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 185/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + N ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSNQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I + PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-SKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|348572800|ref|XP_003472180.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
[Cavia porcellus]
Length = 1215
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 186/447 (41%), Gaps = 81/447 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSP-ISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P ++S P L + + +
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVSPGEQRSRFPGCGLWTYCRIIS 617
Query: 698 LPAGVIIGYTFVIGTHRP-SVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRL 756
P+ + +P S++ L P E L ++ G + +G G I
Sbjct: 618 DPSDCL----------QPLSMQALPAQP-ESLCIVEMGGTEKQDELGE--RGSI------ 658
Query: 757 VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFE 816
Y+ GL+NG+LLR + P++ +T
Sbjct: 659 ---GFLYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------------- 688
Query: 817 SKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQ 876
TR +G PV L + ++A+S R WL + + T +S++
Sbjct: 689 -------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYE 735
Query: 877 PSTHATPVCSVECPKGILFVAENSLNL 903
A+ S +CP+GI+ ++ N+L +
Sbjct: 736 TLEFASGFASEQCPEGIVAISTNTLRI 762
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|326676028|ref|XP_002667683.2| PREDICTED: splicing factor 3B subunit 3-like [Danio rerio]
gi|123888555|sp|Q1LVE8.1|SF3B3_DANRE RecName: Full=Splicing factor 3B subunit 3
Length = 1217
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 189/449 (42%), Gaps = 83/449 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++PI+ + D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDEQESLSPIMSCQIADLANEDTPQLYVACGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR V D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 EDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIIRCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSS--V 695
++ S ++ Y + + +++ C+S+ P E+R + LV N+ +
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRII 617
Query: 696 PALPAGVIIGYTFVIGTHRP-SVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV 754
P+ + +P S++ L P E L ++ G + + +G G I
Sbjct: 618 SLDPSDCL----------QPLSMQALPAQP-ESLCIVEMGGVEKQDELGE--KGTI---- 660
Query: 755 RLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSS 814
Y+ GL+NG+LLR + P++ +T
Sbjct: 661 -----GFLYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR----------- 690
Query: 815 FESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSIS 874
TR +G PV L + ++A+S R WL + + T +S
Sbjct: 691 ---------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLS 735
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
++ +A+ S +CP+GI+ ++ N+L +
Sbjct: 736 YETLEYASGFASEQCPEGIVAISTNTLRI 764
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 10/143 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG ++ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDANTGKVHTLLTMEVFGVVRSLMAFRLTGG----- 73
Query: 107 SQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCL 166
KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 74 ----TKDYVVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRA 129
Query: 167 IAVSAYEDRLGLFSLSMSSGSDI 189
+ + A E + ++ L+ + + +
Sbjct: 130 VMIGATEKQKLVYILNRDAAARL 152
>gi|168046759|ref|XP_001775840.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672847|gb|EDQ59379.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1214
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 190/455 (41%), Gaps = 98/455 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I+++ PI+DM V + +E+ Q+F+ CG P SLRI+R G+++ ++ +P+
Sbjct: 394 LVQIDDIESLMPIMDMKVANIFEEETPQIFSLCGRGPRSSLRILRPGLAVTEMA-VSPLP 452
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WTV+ +D + +++V+SFV T VL +G +V+DS GF +LA L+
Sbjct: 453 GVPSAVWTVKKHANDEFDAYIVVSFVNATLVLSIGETVEEVSDS-GFLDTTPSLAISLLG 511
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D L+Q+H + +R + P + + +G ++I +
Sbjct: 512 DDSLMQVHPSGIRHIRADGRINEWKTPGKKTI----------VKVGYNRMQVVIALSGGE 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
F + + ++ E++ + +++C+ I PE R+ S ++
Sbjct: 562 LIYFEMDMSG------QLMEIEKRDMTGDVACLHIAPV-PEGRQRSRFLA---------- 604
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIV----------LTNTMGTAISG 748
+G++ ++ +LS P + +++L+ ++ + + G
Sbjct: 605 -----------VGSYDSTIRILSLDPDDCMQILSVQAVSSPPESLLLLEVQASTGGEDGA 653
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
P V ++ AGL+NG+LLR E ++ +T G
Sbjct: 654 DHPASV--------FLNAGLQNGVLLRTEV--------------DMVTGQLSDTRTRFLG 691
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
+ A F ++ + RR M+ LS RPWL +
Sbjct: 692 LRAPKLFSAR---------VRGRRA-----------------MLCLSSRPWLGYIHQGHF 725
Query: 869 AYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ +A S +C +G++ VA ++L +
Sbjct: 726 LLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRV 760
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNS 107
+G+ S ++V + ++L+ ++G +Q++ +FG I+ LA +F S
Sbjct: 19 YGNFTGGKSQEIVVARGKVLDLLRPDDNGKLQTLLSVEIFGAIRSLA------QFRLTGS 72
Query: 108 QVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLI 167
Q KD +VV SDSG++ L + E + F V Q G R G+ LAVD G +
Sbjct: 73 Q---KDYIVVGSDSGRIVILEYNKEKNIFEKVHQETFGKSGCRRIVPGQYLAVDPKGRAV 129
Query: 168 AVSAYEDRLGLFSLSMSSGS 187
+ A E + ++ L+ + +
Sbjct: 130 MIGACEKQKLVYVLNRDNAA 149
>gi|168047617|ref|XP_001776266.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672361|gb|EDQ58899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1089
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 175/443 (39%), Gaps = 100/443 (22%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D+ VVD + + Q+ C G +GSLRI+R+GI + + + + QGI G W+
Sbjct: 347 NLGPIVDLCVVDLERQGQGQVVTCSGAFKDGSLRIVRNGIGINE--QASVELQGIKGMWS 404
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFT-DVTDSVGFRPDVCTLACGLVADGLLVQI 585
+R SD Y +FLV+SF+ ETR+L + + + T+ GF + TL C LVQ+
Sbjct: 405 LRASSSDVYDTFLVVSFISETRILAMNTDDELEETEIDGFDSEAQTLFCHNAVHDQLVQV 464
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
++RL T W P ++I++ + ++++T ++I
Sbjct: 465 TAGSLRLVNAKTRKQ----------LTEWKAPAPMTINVATANASQVLLATGGGNLVYI- 513
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISI-PQKHPERRKSSSPISLVSNSSVP--ALPAG 701
+ + + H +L+ E+SC+ I P R + + + ++ SV ALP+
Sbjct: 514 -----EIGQGTLTGVAHSQLEYEISCLDINPVGENPERSNLVAVGMWTDISVRIFALPS- 567
Query: 702 VIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQ 761
L+ + KE L G I IP+ V D
Sbjct: 568 ------------------LTLINKEML----GGEI-------------IPRSVLFCSFDG 592
Query: 762 F-YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDE 820
Y+L + +G L F P S+ E D
Sbjct: 593 LAYLLCAVGDGHLFNFMLNP--------------------------------STGELSDR 620
Query: 821 LPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTH 880
I+L G P+ L + A SDRP ++ ++ L Y++++ + H
Sbjct: 621 KKISL--------GTQPIALRTFRSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVNH 672
Query: 881 ATPVCSVECPKGILFVAENSLNL 903
P S P + E L +
Sbjct: 673 MCPFNSASFPDSLAIGKEGELTI 695
>gi|307186138|gb|EFN71863.1| DNA damage-binding protein 1 [Camponotus floridanus]
Length = 1136
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/487 (22%), Positives = 198/487 (40%), Gaps = 108/487 (22%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMVLK-----EENGRLVYTSPIQ---NIAPILDMSVVD 478
P C + +++ + +GD ++K +ENG Y P++ N+API+DM+VVD
Sbjct: 311 PEC--ITYLDNGVIYVGSRLGDSQLIKLITKADENGS--YCVPMETFTNLAPIVDMAVVD 366
Query: 479 YHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSF 538
+ + QM C G EGSLRIIR+GI +++ + GI G W +++ + + +
Sbjct: 367 LERQGQGQMVTCSGAFKEGSLRIIRNGIGIQE--HASIDLPGIKGMWALKVGGGN-FDNT 423
Query: 539 LVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMV 598
LVLSFV +TR+L + + TD GF D T G V + L +QI + RL +
Sbjct: 424 LVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARL-----I 478
Query: 599 AHSGGIPLSYPVCTSWFPEHV-SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIY 657
+H S V + W P++ +IS+ A ++ +T N F + +S +I
Sbjct: 479 SHE-----SKMVVSEWEPQNKRTISVVACNGTQVLCATGNDLFY-------MEISCNQIV 526
Query: 658 EMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSV 717
LQ E++C+ I SP+ V+ + + A+ I SV
Sbjct: 527 PKGFATLQHEVACLDI-----------SPLDGVNEAKIVAVGLWTDI-----------SV 564
Query: 718 EVLSFVPKEGL-RVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRF 776
+L+ E + + L G I+ + + T G Y+L L +G + F
Sbjct: 565 RILTLPGLEEINKELLGGEIIPRSILMTCFEG------------NTYLLCALGDGSMYYF 612
Query: 777 EWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGIT 836
+ + S + +G
Sbjct: 613 TLYKQNGVLSDKKRV----------------------------------------TLGTQ 632
Query: 837 PVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFV 896
P L ++ A SDRP ++ ++ H L +++++ + H + + P +
Sbjct: 633 PTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALA 692
Query: 897 AENSLNL 903
++++ +
Sbjct: 693 TDSTVTI 699
>gi|197101659|ref|NP_001125500.1| splicing factor 3B subunit 3 [Pongo abelii]
gi|75042033|sp|Q5RBI5.1|SF3B3_PONAB RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|55728259|emb|CAH90875.1| hypothetical protein [Pongo abelii]
Length = 1217
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 183/453 (40%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + + + +
Sbjct: 395 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSETA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCI 750
+V ++S P + L+ L+ S+ + GT +
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDEL 654
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 655 GERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 10/143 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTGG----- 73
Query: 107 SQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCL 166
KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 74 ----TKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRA 129
Query: 167 IAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 130 VMISAIEKQKLVYILNRDAAARL 152
>gi|313235544|emb|CBY10999.1| unnamed protein product [Oikopleura dioica]
Length = 1185
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 178/447 (39%), Gaps = 93/447 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L T + +++P+L+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LALTDEMDSLSPVLNCEVADLANEDTPQLYVTCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + S++++SFV T VL +G ++TDS GF TL+ GL+
Sbjct: 454 GNPNAVWTVKTSADADHDSYIIVSFVNATLVLSIGETVEEITDS-GFLGTTPTLSSGLMG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
+ LVQI+ +R S W P+ I A ++++ +
Sbjct: 513 EDALVQIYPEGIRHIR------------SDRRVNEWRAPDRKQIVRCACNRQQVVIALTG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ E+ ++ ERR+ S I + V
Sbjct: 561 GEIVYF-----------------------EMDPTGQLNEYTERREFGSEIIAL---DVGD 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLV 757
+PAG +G +V ++S P + L+ TM + +PQDV +
Sbjct: 595 VPAGEQRCRFLAVGLSDGTVRIISLDPNDCLQ---------PRTMQALPT--VPQDVAIT 643
Query: 758 LADQFYVLA-GLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFE 816
YVL GL+NG+LLR +++ + IS T
Sbjct: 644 EHKGQYVLQIGLQNGVLLR----------TTIDSVTGEISDT------------------ 675
Query: 817 SKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQ 876
TR +G V L + + ++A+S R WL + T +S++
Sbjct: 676 ------------RTRYLGTKAVKLYKVVTEGENSVLAVSSRSWLSYRHQQRFHLTPLSYE 723
Query: 877 PSTHATPVCSVECPKGILFVAENSLNL 903
AT S +CP+GI+ +A N+L +
Sbjct: 724 ALDSATGFSSEQCPEGIVAIAGNTLRI 750
>gi|322787057|gb|EFZ13281.1| hypothetical protein SINV_13198 [Solenopsis invicta]
Length = 986
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 39/259 (15%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMVLK-----EENGRLVYTSPIQ---NIAPILDMSVVD 478
P C + +++ + +GD ++K +ENG Y P++ N+API+DM+VVD
Sbjct: 311 PEC--ITYLDNGVIYVGSRLGDSQLIKLITKADENGS--YCVPMETFTNLAPIVDMAVVD 366
Query: 479 YHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSF 538
+ + QM C G EGSLRIIR+GI +++ + GI G W +++ S + +
Sbjct: 367 LERQGQGQMVTCSGAFKEGSLRIIRNGIGIQE--HASIDLPGIKGMWALKVGGSH-FDNT 423
Query: 539 LVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMV 598
LVLSFV +TR+L + + TD GF D T G V + L +QI +VRL
Sbjct: 424 LVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSVRL------ 477
Query: 599 AHSGGIPLSYP---VCTSWFPEHV-SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHY 654
+SY V + W P++ +IS+ A ++ +T N F + +S
Sbjct: 478 -------ISYESKMVISEWEPQNKRTISVVACNGTQVLCATGNDLFY-------IEISCN 523
Query: 655 EIYEMQHMRLQSELSCISI 673
+I + LQ E++C+ I
Sbjct: 524 QIVSKGFVTLQHEVACLDI 542
>gi|410926437|ref|XP_003976685.1| PREDICTED: splicing factor 3B subunit 3-like, partial [Takifugu
rubripes]
Length = 1020
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 186/452 (41%), Gaps = 89/452 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++PI+ + D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDEQESLSPIMSCQIADLANEDTPQLYVACGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR V D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 DEALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVRCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ E+ ++ ER++ S+ + +S ++V
Sbjct: 562 ELVYF-----------------------EMDPTGQLNEYTERKEMSADVVCMSLANV--- 595
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLT--NTMGTAISGCIPQDVRL 756
P G +G +V ++S P + L+ L+ ++ + + G QD
Sbjct: 596 PPGEQRSRFLAVGLADNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQD--- 652
Query: 757 VLADQ-----FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAA 811
L ++ Y+ GL+NG+LLR + P++ +T
Sbjct: 653 ELGEKGSMGFLYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR-------- 690
Query: 812 TSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYT 871
TR +G PV L + ++A+S R WL + + T
Sbjct: 691 ------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLT 732
Query: 872 SISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+S++ +A+ S +CP+GI+ ++ N+L +
Sbjct: 733 PLSYETLEYASGFASEQCPEGIVAISTNTLRI 764
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 11/160 (6%)
Query: 32 YLAKCVLKGSV-VLQVAHGHLRSPTSNDVVFGKETSIELVI-IGEDGIVQSVCEQAVFGT 89
+L L+ S + HG+ ++V + +EL+ G V ++ VFG
Sbjct: 2 FLYNITLQRSTGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTMEVFGI 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +V+ SDSG++ L + + F + Q G
Sbjct: 62 IRSLMAFRLTGG---------TKDYIVIGSDSGRIVILEYHTSKNMFEKIHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
R G+ LAVD G + + A E + ++ L+ + + +
Sbjct: 113 RRIVPGQFLAVDPKGRAVMIGAIEKQKLVYILNRDAAARL 152
>gi|355718834|gb|AES06402.1| splicing factor 3b, subunit 3, 130kDa [Mustela putorius furo]
Length = 1101
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 184/452 (40%), Gaps = 86/452 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 339 LVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 397
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 398 GNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 456
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D LVQ++ + +R I V P +I AV ++++ +
Sbjct: 457 DDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 505
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ +EM +E + ER++ S+ + +S ++VP
Sbjct: 506 ELVY--------------FEMDPSGQLNE---------YTERKEMSADVVCMSLANVPPG 542
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCIP 751
+G +V ++S P + L+ L+ S+ + GT +
Sbjct: 543 EQRSRFLAVLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELG 602
Query: 752 QDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAA 811
+ + Y+ GL+NG+LLR + P++ +T
Sbjct: 603 ERGSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR-------- 637
Query: 812 TSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYT 871
TR +G PV L + ++A+S R WL + + T
Sbjct: 638 ------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLT 679
Query: 872 SISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 680 PLSYETLEFASGFASEQCPEGIVAISTNTLRI 711
>gi|428164905|gb|EKX33915.1| hypothetical protein GUITHDRAFT_158867 [Guillardia theta CCMP2712]
Length = 1092
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 116/515 (22%), Positives = 212/515 (41%), Gaps = 106/515 (20%)
Query: 401 GEFFMIEIAFGSDGHKVH--LSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLK----- 453
G+ +++ + F DG+KV + L + K + +++ + GD +++
Sbjct: 276 GQLYVLVLEF--DGNKVLGLKLDTLGETSSAKTITYLDSGVVFIGSCFGDSQLIRLHPDK 333
Query: 454 -EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLL 512
E + + N+ PI D VVD + + Q+ C G +GSLR++R+GI + +
Sbjct: 334 DENDSNIEVLESFTNLGPIQDFCVVDLERQGQGQVVTCSGTLKDGSLRVVRNGIGINE-- 391
Query: 513 RTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTL 572
+ A GI G W++R + Y +L+ SFV ETRVL + T+ GF + T+
Sbjct: 392 QAAVELPGIKGLWSLRESIDAQYDKYLIQSFVNETRVLEIADEELSETEIDGFDHNAQTI 451
Query: 573 ACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP---EHVSISLGAVAHN 629
C V L+QI + ++RL S + WFP E ++++ G V
Sbjct: 452 FCSNVLGDCLLQITEVSLRLVSTK----------SKQLLKEWFPPNGERITVAGGNVQQ- 500
Query: 630 MIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISL 689
+++++ ++ L VS+ ++ E++ + + E++C+++ +P+
Sbjct: 501 -VVLTSGKRTLIY------LDVSNGDVTEVKRIEMDQEIACLNL-----------NPLGE 542
Query: 690 VSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGC 749
S+ + A +G S+ +L L S +V T ++G
Sbjct: 543 KSDHNKSDFVA---------VGHWNLSLSMLR---------LPSMEVVCTESIG---GDA 581
Query: 750 IPQDVRLV-LADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
IP+ + LV L Y+L L +G L F I +S A I R
Sbjct: 582 IPRSLLLVTLEGVDYLLCALGDGYLFTFA------IDASTAQIGE------------RKK 623
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
I+ + P+ L +R G T VF A SDRP ++ + L
Sbjct: 624 ISLGTH-------PMILSKFMSR--GATHVF-------------AASDRPTVIYSNNRKL 661
Query: 869 AYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+++++ + T P S P + E SL +
Sbjct: 662 LFSNVNLKEVTQMAPFNSEGFPDSLAIATETSLRI 696
>gi|224109600|ref|XP_002315251.1| predicted protein [Populus trichocarpa]
gi|222864291|gb|EEF01422.1| predicted protein [Populus trichocarpa]
Length = 1213
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 193/454 (42%), Gaps = 96/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++ PI+DM V + DE+ Q+F+ CG P SLRI+R G+++ ++
Sbjct: 393 LVRIDQVESLMPIMDMKVANLFDEETPQIFSLCGRGPRSSLRILRPGLAISEM--AVSQL 450
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WTV+ + D + +++V+SF T VL +G +V+DS GF +LA L+
Sbjct: 451 PGVPSAVWTVKKNIYDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF--PEHVSISLGAVAHNMIIVST 635
D L+QIH N +R + G I W + + +G+ ++I +
Sbjct: 510 GDDSLMQIHPNGIR-----HIREDGRI-------NEWRTPAKRTIVKVGSNRLQVVIALS 557
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
F + + ++ E++ + +++C+ I PE R+ S ++
Sbjct: 558 GGELIYFEVDMTG------QLMEVEKHEMSGDVACLDIAPV-PEGRQRSRFLA------- 603
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGC 749
+G++ ++ VLS P + +++L+ S+ +L + +I G
Sbjct: 604 --------------VGSYDNTIRVLSLDPDDCMQILSVQSVSAPPESLLFLEVQASIGGE 649
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
D L ++ AGL+ G+L FR ++ +G
Sbjct: 650 DGADHPASL----FLNAGLQTGVL-------------------------FRTVVDMVTGQ 680
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
+ S +R +G+ L ++ M+ LS RPWL +
Sbjct: 681 LSDSR---------------SRFLGLRAPKLFSINVRGRRAMLCLSSRPWLGYIHQGHFL 725
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ +A S +C +G++ VA ++L +
Sbjct: 726 LTPLSYETLEYAASFSSDQCAEGVVSVAGDALRI 759
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
YL L + + ++ +G+ + ++V + ++L+ E+G +Q+V +FG I
Sbjct: 2 YLYSLTLQRATGIISAINGNFSGGKAQEIVVARGKVLDLLRPDENGKLQTVLSVEIFGAI 61
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
+ LA +F +Q KD +VV SDSG++ L + E + + Q G
Sbjct: 62 RSLA------QFRLTGAQ---KDYIVVGSDSGRIVILEYNKERNVLDKIHQETFGKSGCR 112
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
R G+ LAVD G + + A E + ++ L+ +
Sbjct: 113 RIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDT 147
>gi|301604148|ref|XP_002931705.1| PREDICTED: splicing factor 3B subunit 3 [Xenopus (Silurana)
tropicalis]
Length = 1217
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 193/472 (40%), Gaps = 92/472 (19%)
Query: 445 EMGDGMVLKEENGRLVYTSPIQNI---------APILDMSVVDYHDEKRDQMFACCGVAP 495
E M L+E + P++N+ +PI+ + D +E Q++ CG P
Sbjct: 372 EFSSAMPLEEGDTFFFQPRPLKNLVLVDEQDSLSPIMSCQIADLANEDTPQLYVACGRGP 431
Query: 496 EGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN 555
SLR++R G+ + ++ + + WTVR + D Y +++++SFV T VL +G
Sbjct: 432 RSSLRVLRHGLEVSEMA-VSELPGNPNAVWTVRRHIEDEYDAYIIVSFVNATLVLSIGET 490
Query: 556 FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF 615
+VTDS GF TL+C L+ + LVQ++ + +R I V
Sbjct: 491 VEEVTDS-GFLGTTPTLSCSLLGEDALVQVYPDGIR-----------HIRADKRVNEWKT 538
Query: 616 PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQ 675
P I AV ++++ + ++ S ++ Y + + +++ C+S+
Sbjct: 539 PGKKIIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEY----TERKEMSADVVCMSLAN 594
Query: 676 KHP-ERRKSSSPISLVSNSS--VPALPAGVIIGYTFVIGTHRP-SVEVLSFVPKEGLRVL 731
P E+R + LV N+ + P+ + +P S++ L P E L ++
Sbjct: 595 VPPGEQRSRFLAVGLVDNTVRIISLDPSDCL----------QPLSMQALPAQP-EALCIV 643
Query: 732 ASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPI 791
G + +G G I Y+ GL+NG+LLR +
Sbjct: 644 EMGGAERQDELGE--RGSI---------GFLYLNIGLQNGVLLR--------------TV 678
Query: 792 HSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADM 851
P++ +T TR +G PV L + +
Sbjct: 679 LDPVTGDLSDTR--------------------------TRYLGSRPVKLFRVRMQGQEAV 712
Query: 852 IALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+A+S R WL + + T +S++ +A+ S +CP+GI+ ++ N+L +
Sbjct: 713 LAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRI 764
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + IEL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKLQEIVVSRGKIIELLRPDANTGKVHTLLTVEVFGVIRSLMAFRLTGG----- 73
Query: 107 SQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCL 166
KD +VV SDSG++ L + + F + Q G R G+ +AVD G
Sbjct: 74 ----TKDYIVVGSDSGRIIILEYHPSKNMFEKIHQETFGKSGCRRIVPGQFIAVDPKGRA 129
Query: 167 IAVSAYEDRLGLFSLSMSSGS 187
+ +SA E + ++ L+ + +
Sbjct: 130 VMISAIEKQKLVYILNRDAAA 150
>gi|260819270|ref|XP_002604960.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
gi|229290289|gb|EEN60970.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
Length = 1049
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 193/479 (40%), Gaps = 97/479 (20%)
Query: 436 EGRFLSAF-VEMGDGMVLKEENGR-LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
E F SA +E GD + + LV + +++PI+ + D +E Q++ G
Sbjct: 370 EPEFSSAMPLEEGDTFLFTPRGLKNLVLVDEMDSLSPIMSCQIADLANEDTPQLYVANGR 429
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
P S R++R G+ + ++ + + WTV+ V D + +++V+SFV T VL +G
Sbjct: 430 GPRSSFRVLRHGLEVSEMA-VSELPGNPNAVWTVKKNVDDEFDAYIVVSFVNATLVLSIG 488
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
+VTDS GF TL+C L+ + L+QI+ +R S
Sbjct: 489 ETVEEVTDS-GFLGTTPTLSCSLIGEDALLQIYPEGIRHIR------------SDKRVNE 535
Query: 614 W-FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCIS 672
W P +I AV ++++ + ++ E+
Sbjct: 536 WRTPGKKTIVKCAVNQRQVVIALTGGELVYF-----------------------EMDPTG 572
Query: 673 IPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA 732
++ ER++ S+ + ++ ++V P G +G +V ++S P + L+ L+
Sbjct: 573 QLNEYTERKEMSAEVICMALANV---PVGEQRCRFLAVGLTDDTVRIISLDPADCLQPLS 629
Query: 733 SGSI--------VLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNI 784
++ +L G I P++ L L GL+NG+LLR
Sbjct: 630 MQALPATPESLCILQMGGGEGIDDTGPRNTMLFLN------IGLQNGVLLRTVL------ 677
Query: 785 PSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLS 844
D++ +L TR +G PV L +
Sbjct: 678 ----------------------------------DQITGDLSDTRTRYLGSRPVKLFQVK 703
Query: 845 DSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ ++A+S R WL T ++ T +S++ +A+ S +CP+GI+ ++ N+L +
Sbjct: 704 MQGNEAVLAMSSRSWLSYTYQNRFHLTPLSYETLEYASGFASEQCPEGIVAISANTLRI 762
>gi|327286386|ref|XP_003227911.1| PREDICTED: splicing factor 3B subunit 3-like [Anolis carolinensis]
Length = 1217
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 186/453 (41%), Gaps = 91/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PIL + D +E Q++ CG P SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELDSLSPILCCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR V D + +++++SFV T VL +G +VTDS GF TL+C L+
Sbjct: 454 GNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ LVQ++ + +R I V P +I AV ++++ +
Sbjct: 513 EDALVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 562 ELVYFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN----- 612
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLT--NTMGTAISGCIPQDVR 755
+V ++S P + L+ L+ ++ + + G QD
Sbjct: 613 ------------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQD-- 652
Query: 756 LVLADQ-----FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
L ++ Y+ GL+NG+LLR + P++ +T
Sbjct: 653 -ELGERGSIGFLYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------- 690
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
TR +G PV L + ++A+S R WL + +
Sbjct: 691 -------------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHL 731
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 732 TPLSYETLEFASGFASEQCPEGIVAISTNTLRI 764
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGIIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQYLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|432851195|ref|XP_004066902.1| PREDICTED: DNA damage-binding protein 1-like [Oryzias latipes]
Length = 1140
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 401 GEFFMI-----EIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLK-- 453
G FM+ E+ G+ K E L + + L +++ + +GD ++K
Sbjct: 278 GRLFMLLLEKEELMDGTVALKDLHVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLN 337
Query: 454 ----EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLE 509
E+ + N+ PILDM VVD + + Q+ C G EGSLRIIR+GI +
Sbjct: 338 VDSNEQGSYVTVMETFTNLGPILDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIH 397
Query: 510 KLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
+ + GI G W +R + LVLSFV +TRVL + + T+ GF +
Sbjct: 398 E--HASIDLPGIKGLWPLRSEAGRESDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQ 455
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAH 628
T CG VA L+QI +VRL + S + + W P+ +IS+ A H
Sbjct: 456 QTFYCGNVAHQQLIQITSGSVRLVLQD----------SKALVSEWKEPQGRNISVAACNH 505
Query: 629 NMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
++++ L+ L + + + EM+H E++C+ I
Sbjct: 506 TQVVLAVGRA--LYYLQILAGELKQISTTEMEH-----EVACLDI 543
>gi|242060436|ref|XP_002451507.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
gi|241931338|gb|EES04483.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
Length = 1232
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 194/453 (42%), Gaps = 94/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ I+++ P++DM V + DE+ Q+F CG P +LRI+R G+++ ++ R+
Sbjct: 407 LMRIDEIESLMPVMDMRVANLFDEETPQLFTACGRGPRSTLRILRPGLAISEMARSMLPA 466
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ I WTV+ ++D + +++V+SF T VL +G +V+DS F +LA L+
Sbjct: 467 EPI-AVWTVKKNINDMFDAYIVVSFTNVTLVLSIGETIEEVSDS-QFLDTTHSLAVTLLG 524
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSIS-LGAVAHNMIIVSTS 636
+ L+Q+H N +R + G + W P +I+ +G+ ++I +
Sbjct: 525 EDSLMQVHPNGIR-----HIREDGRV-------NEWRTPGKKTITKVGSNRLQVVIALSG 572
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
F + + ++ E++ + +++C++I PE R+ S ++
Sbjct: 573 GELIYFEMDMTG------QLMEVEKQDMSGDVACLAIAPV-PEGRQRSRFLA-------- 617
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGCI 750
+G++ ++ +LS P + L+ L+ S+ +L + +I G
Sbjct: 618 -------------VGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASIGGED 664
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
D L ++ AGL+NG+L R N + + ++
Sbjct: 665 GADYPANL----FLNAGLQNGVLFR------------------------TNVDMVTGQLS 696
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
T S R +G+ P L P S M+ LS RPWL +
Sbjct: 697 DTRS----------------RFLGLRPPKLFPCVVSHRQAMLCLSSRPWLGYIHQGHFLL 740
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S A+ S +C +G++ VA ++L +
Sbjct: 741 TPLSCDTLESASSFSSDQCSEGVVAVAGDALRI 773
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 74 EDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEM 133
E G ++++ VFG I+ LA +F + KD LVV SDSG+L L + +
Sbjct: 59 ETGRLRTLLSVDVFGAIRSLA------QFRLTGAN---KDYLVVGSDSGRLVILEYSPDR 109
Query: 134 HRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGS 187
+R V Q G R G++LAVD G + ++A E + ++ L+ + +
Sbjct: 110 NRLDKVHQETFGKSGCRRIVPGQLLAVDPKGRALCIAALEKQKLVYVLNRDAAA 163
>gi|242018509|ref|XP_002429717.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
gi|212514723|gb|EEB16979.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
Length = 1218
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 193/476 (40%), Gaps = 88/476 (18%)
Query: 436 EGRFLSAF-VEMGDGMVLKEENGR-LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
E F SA +E GD R LV + +++PI+ V D +E Q++ CG
Sbjct: 370 EPEFSSAMPLEEGDTFFFAPRALRNLVQVDEMDSLSPIMACQVADLANEDTPQLYMLCGR 429
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
P +LR++R G+ + ++ + + WTV+ +V + Y +++++SFV T VL +G
Sbjct: 430 GPRSTLRVLRHGLEVSEMA-VSELPGNPNAVWTVKRRVEEEYDAYIIVSFVNATLVLSIG 488
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
+VTDS GF TL+C + D LVQ++ + +R I V
Sbjct: 489 ETVEEVTDS-GFLGTTPTLSCSALGDDALVQVYPDGIR-----------HIRADKRVNEW 536
Query: 614 WFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
P +I AV +++ +L+ +EM +E
Sbjct: 537 KAPGKKTIMKCAVNQRQVVI--------------ALTAGELVYFEMDPTGQLNE------ 576
Query: 674 PQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVL-- 731
+ ER+ S +S ++ +V +P G + +G +V ++S P + L L
Sbjct: 577 ---YTERKAMPSDVSCMALGNV--VP-GELRSRFLAVGLADNTVRIISLDPSDCLSPLSM 630
Query: 732 ----ASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSS 787
A+ + MG A ++ V Y+ GL+NG+LLR
Sbjct: 631 QALPAAAESLCIVEMGAADKKPDSEE-STVTQSNLYLNVGLQNGVLLR------------ 677
Query: 788 VAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSL 847
+ P++ +T TR +G PV L +
Sbjct: 678 --TVLDPVTGDLADTR--------------------------TRYLGSRPVKLFRIKMQG 709
Query: 848 DADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++A+S R WL ++ T +S++ +A+ S +CP+GI+ ++ N+L +
Sbjct: 710 SEAVLAMSSRSWLSYYYQNRFHLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRI 765
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 10/154 (6%)
Query: 30 IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFG 88
+H + + + + HG+ +++ + S+EL+ + G V ++ +FG
Sbjct: 1 MHLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEIFG 60
Query: 89 TIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
I+ L F KD +VV SDSG++ L + + F V Q G
Sbjct: 61 VIRSLM------SFRLTGGT---KDYIVVGSDSGRIVILEYIPAKNLFEKVHQETFGKSG 111
Query: 149 NSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLS 182
R G+ LA+D G + V A E + ++ L+
Sbjct: 112 CRRIVPGQYLAIDPKGRAVMVGAVEKQKLVYILN 145
>gi|221046721|pdb|3EI4|A Chain A, Structure Of The Hsddb1-Hsddb2 Complex
gi|221046723|pdb|3EI4|C Chain C, Structure Of The Hsddb1-Hsddb2 Complex
gi|221046725|pdb|3EI4|E Chain E, Structure Of The Hsddb1-Hsddb2 Complex
Length = 1158
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 185/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 346 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 405
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + + LVLSFV +TRVL + +
Sbjct: 406 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEVEE 463
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 464 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 513
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 514 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 561
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 562 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 604
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 605 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 634
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 635 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 673
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 674 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 719
>gi|224100909|ref|XP_002312063.1| predicted protein [Populus trichocarpa]
gi|222851883|gb|EEE89430.1| predicted protein [Populus trichocarpa]
Length = 1213
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 193/454 (42%), Gaps = 96/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++ P++DM V + DE+ Q+F+ CG P SLRI+R G+++ ++
Sbjct: 393 LVRIDQVESLMPVMDMKVANIFDEETPQIFSLCGRGPRSSLRILRPGLAISEM--AVSQL 450
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WTV+ +D + +++V+SF T VL +G +V+DS GF +LA L+
Sbjct: 451 PGVPSAVWTVKRNANDEFDAYIVVSFNNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP--EHVSISLGAVAHNMIIVST 635
D L+QIH N +R + G I W + + +G+ ++I +
Sbjct: 510 GDDSLMQIHPNGIR-----HIREDGRI-------NEWRTPGKRTIVKVGSNRLQVVIALS 557
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
F + + ++ E++ + +++C+ I PE R+ S ++
Sbjct: 558 GGELIYFEVDMTG------QLMEVEKHEMSGDVACLDIAPV-PEGRQRSRFLA------- 603
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGC 749
+G++ ++ VLS P + +++L+ S+ +L + +I G
Sbjct: 604 --------------VGSYDNTIRVLSLDPDDCMQILSVQSVSAPPESLLFLEVQASIGGE 649
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
D L ++ AGL+ G+L FR ++ +G
Sbjct: 650 DGADHPASL----FLNAGLQTGVL-------------------------FRTVVDMVTGQ 680
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
+ S +R +G+ L ++ M+ LS RPWL +
Sbjct: 681 LSDSR---------------SRFLGLRAPKLFAINVRGRRAMLCLSSRPWLGYIHQGHFL 725
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ +A S +C +G++ VA ++L +
Sbjct: 726 LTPLSYETLEYAASFSSDQCAEGVVAVAGDALRI 759
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
YL L + + ++ +G+ + ++V + ++L+ E+G +Q+V +FG I
Sbjct: 2 YLYSLTLQRATGIVSAINGNFSGGKAQEIVVARGKVLDLLRPDENGKLQTVLSVEIFGAI 61
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
+ LA +F +Q KD +VV SDSG++ L + E + F + Q G
Sbjct: 62 RSLA------QFRLTGAQ---KDYIVVGSDSGRIVILEYNKERNVFDKIHQETFGKSGCR 112
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
R G+ LAVD G + + A E + ++ L+ +
Sbjct: 113 RIVPGQYLAVDPKGRAVMIGACEKQKLVYVLNRDT 147
>gi|90108797|pdb|2B5L|A Chain A, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
Protein
gi|90108798|pdb|2B5L|B Chain B, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
Protein
gi|90108801|pdb|2B5M|A Chain A, Crystal Structure Of Ddb1
gi|116667897|pdb|2HYE|A Chain A, Crystal Structure Of The Ddb1-cul4a-rbx1-sv5v Complex
gi|1136228|gb|AAA88883.1| UV-damaged DNA binding factor [Homo sapiens]
gi|1588524|prf||2208446A xeroderma pigmentosum group E-binding factor
Length = 1140
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 185/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|413081953|ref|NP_741992.2| DNA damage-binding protein 1 [Rattus norvegicus]
gi|293344614|ref|XP_002725831.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
gi|293356422|ref|XP_002728912.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
gi|149062405|gb|EDM12828.1| damage-specific DNA binding protein 1 [Rattus norvegicus]
Length = 1140
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R S LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPSRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-ESNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|384253371|gb|EIE26846.1| hypothetical protein COCSUDRAFT_52476 [Coccomyxa subellipsoidea
C-169]
Length = 1205
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 194/457 (42%), Gaps = 96/457 (21%)
Query: 456 NGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTA 515
N RLV +++++PI+D V + E+ Q++A CG +LR++R G++ ++ +
Sbjct: 393 NLRLV--DEVESLSPIMDFKVANLLKEEIPQLYAMCGRGARSTLRVLRPGLAATEIA-VS 449
Query: 516 PIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG 575
P+ T WT++ V+DP+ +++++SF T VL +G +V DS GF V TL
Sbjct: 450 PLPGNPTAVWTLKRSVNDPFDAYIIVSFTNATLVLSIGETVVEVNDS-GFLGTVPTLRTQ 508
Query: 576 LVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVST 635
L+ D ++Q+H + +R I V P +I A ++++
Sbjct: 509 LLTDDSMLQVHPSGLR-----------HIRADRRVNEWRAPGRRTIVKAATNEQQVVIAL 557
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
S ++ LS + ++ E++ + ++ C+ I PE R+ S +++ S S
Sbjct: 558 SGGELIYF----ELSPTG-QLMEVEKKEMAGDVVCLDIAPV-PEGRQRSRFLAVASYDS- 610
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISG 748
SV +LS P++ + LA S++ ++ I+G
Sbjct: 611 --------------------SVRILSLDPEDMMSALAVQMVSAVPESLLFIDSPAADIAG 650
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
+ A ++ GL NG+LLR E
Sbjct: 651 ---KGEDASGAGGLFLNIGLLNGVLLRTEV------------------------------ 677
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQT--ARH 866
D++ L TR +G P L +S M+ALS RPWL + R+
Sbjct: 678 ----------DKVTGQLSDTRTRFLGTRPPKLFAVSVRGKRSMLALSSRPWLGYSDMGRY 727
Query: 867 SLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+LA +S++ +A+ S +CP+G V+++ L +
Sbjct: 728 TLA--PLSYEALDYASGFASDQCPEGFCAVSKSMLRI 762
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 32 YLAKCVLKGSVVLQVA-HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
YL L + +Q A +G+ +P + ++V + ++EL+ + G VQ++ VFG I
Sbjct: 2 YLYNLTLSRASGIQCAIYGNFSAPKAQEIVVSRGKTLELLRPDDTGRVQTIFTTEVFGCI 61
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
+ LA F + +D ++V SDSG++ L + E + F + Q G
Sbjct: 62 RSLA------PFRLTGAS---RDYVIVGSDSGRIVILEYIKEQNYFRKIHQETYGKSGCR 112
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
R G+ LAVD G + A E + ++ L+ +++
Sbjct: 113 RIVPGQYLAVDPKGRACLIGAMEKQKLVYVLNRDQAANL 151
>gi|340367933|ref|XP_003382507.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Amphimedon
queenslandica]
Length = 1214
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 184/448 (41%), Gaps = 84/448 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ +++++PI+ + D +E Q++A CG P SLR++R G+ + ++ + +
Sbjct: 394 LILVDEMESLSPIMSCQIADLANEDTPQLYAACGRGPRSSLRVLRHGLEVTEMA-VSELP 452
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + + S++V+SF+ T +L +G +VTDS GF TLAC +
Sbjct: 453 GNPHAVWTVKKDSKEDFDSYIVVSFMNATLILSIGETVEEVTDS-GFLGTTPTLACSQLG 511
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSN 637
D L+QI+ +R S W P I AV + ++++ S
Sbjct: 512 DDALIQIYPEGIRHIR------------SDKRVNEWRSPGKRLIRQCAVNEHQVVIALSG 559
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ +S ++ Y + + +E+ CIS+ +
Sbjct: 560 GEIVYFEMDQSGQLNEY----TERKEMTAEVICISL----------------------GS 593
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI-VLTNTMGTA-ISGCIPQDVR 755
+P G +G +V ++S P + L+ L+ ++ L ++ +SG + D
Sbjct: 594 VPPGQQRCRFLAVGLSDQTVRIISLDPHDTLQPLSMQALPALPESLCIVNMSGNVSDDTT 653
Query: 756 LVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSF 815
+ F + GL+NG+LLR
Sbjct: 654 VSTGGLFLNI-GLQNGVLLR---------------------------------------- 672
Query: 816 ESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISF 875
+ D + +L TR +G PV L + +IA+S R WL T + T +S+
Sbjct: 673 TALDNVTGDLSDTRTRYLGTRPVKLFRVRIQGTEGVIAVSSRTWLNYTYQSRFHLTPLSY 732
Query: 876 QPSTHATPVCSVECPKGILFVAENSLNL 903
+A+ S +CP+G++ ++ N+L +
Sbjct: 733 DLLEYASSFTSEQCPEGMVAISSNTLRI 760
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 30 IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFG 88
+H A + K S + HG+ + +VV + +EL+ + G V + VFG
Sbjct: 1 MHLYALTLQKPSCITAAVHGNFSGRKAQEVVVARGKVLELLRPDPNTGKVVELVSTEVFG 60
Query: 89 TIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
I+ L F S KD +V+ SDSG++ L + + F V Q G
Sbjct: 61 LIRSLIT------FRLTGST---KDYIVLGSDSGRIVILEYDPVKNVFEKVHQETYGKSG 111
Query: 149 NSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGS 187
R G+ LAVD G + + A E + ++ L+ S +
Sbjct: 112 CRRIVPGQYLAVDPKGRALMIGAVEKQKLVYILNRDSAA 150
>gi|122692537|ref|NP_001073731.1| DNA damage-binding protein 1 [Bos taurus]
gi|426251842|ref|XP_004019630.1| PREDICTED: DNA damage-binding protein 1 [Ovis aries]
gi|134034086|sp|A1A4K3.1|DDB1_BOVIN RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|119223918|gb|AAI26630.1| Damage-specific DNA binding protein 1, 127kDa [Bos taurus]
gi|296471644|tpg|DAA13759.1| TPA: DNA damage-binding protein 1 [Bos taurus]
Length = 1140
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGMSPLCAIGLWTDISARIA-KLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|270346571|pdb|3I7H|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Hbx
gi|270346573|pdb|3I7K|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Whx
gi|270346575|pdb|3I7L|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Ddb2
gi|270346577|pdb|3I7N|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdtc1
gi|270346579|pdb|3I7O|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Iqwd1
gi|270346581|pdb|3I7P|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr40a
gi|270346583|pdb|3I89|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr22
gi|270346585|pdb|3I8C|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr21a
gi|270346587|pdb|3I8E|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr42a
gi|270346588|pdb|3I8E|B Chain B, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr42a
Length = 1143
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 185/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 331 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 390
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + + LVLSFV +TRVL + +
Sbjct: 391 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEVEE 448
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 449 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 498
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 499 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 546
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 547 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 589
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 590 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 619
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 620 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 658
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 659 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 704
>gi|440893607|gb|ELR46310.1| DNA damage-binding protein 1 [Bos grunniens mutus]
Length = 1143
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGMSPLCAIGLWTDISARIA-KLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|354504619|ref|XP_003514371.1| PREDICTED: DNA damage-binding protein 1-like [Cricetulus griseus]
gi|344258340|gb|EGW14444.1| DNA damage-binding protein 1 [Cricetulus griseus]
Length = 1140
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R S LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPSRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|345498295|ref|XP_001607743.2| PREDICTED: DNA damage-binding protein 1-like [Nasonia vitripennis]
Length = 1140
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 191/466 (40%), Gaps = 102/466 (21%)
Query: 446 MGDGMVLK-----EENGRLVYT-SPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K +ENG T N+API+DM+VVD + + Q+ C G EGSL
Sbjct: 331 LGDSQLIKLNTKPDENGSYCSTMETFTNLAPIVDMAVVDLERQGQGQIVTCSGAFKEGSL 390
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI +++ + GI G W +++ S + + LVLSFV +TR+L + +
Sbjct: 391 RIIRNGIGIQE--HASIDLPGIKGMWALKVD-SVNFDNTLVLSFVGQTRILMLNGEEVEE 447
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHV 619
T+ GF D T G V + +++QI + RL S V + W P++
Sbjct: 448 TEIPGFVADEQTFHTGNVTNDVIIQITPTSARLISNK----------SSSVISEWEPDNK 497
Query: 620 -SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ A ++ +T N F L ++ +I + LQ E++C+ I
Sbjct: 498 RTISVVACNGTQVLCATGNDLFY-------LEINDNQIVSKGYTTLQHEVACVDI----- 545
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGL-RVLASGSIV 737
SP+ S + + A+ I SV +L+ E + + L G I+
Sbjct: 546 ------SPLDGSSEAKIVAVGLWTDI-----------SVRILTLPKLEEINKELLGGEII 588
Query: 738 LTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
+ + T G Y+L L +G + F
Sbjct: 589 PRSILMTCFEG------------NTYLLCALGDGSMYYF--------------------- 615
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
T N ++G+ A D+ + L G P L ++ A SDR
Sbjct: 616 ----TLNKQNGMLA-------DKKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 656
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + H + + + +N++ +
Sbjct: 657 PTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYSDSLALATDNTVTI 702
>gi|395852550|ref|XP_003798801.1| PREDICTED: DNA damage-binding protein 1 [Otolemur garnettii]
Length = 1140
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 185/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSEPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVCQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGMSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|326919947|ref|XP_003206238.1| PREDICTED: DNA damage-binding protein 1-like [Meleagris gallopavo]
Length = 1079
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 32/238 (13%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 267 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 326
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYH---SFLVLSFVEETRVLRVGLNF 556
RIIR+GI + + + GI G W +R SD +H + LVLSFV +TRVL +
Sbjct: 327 RIIRNGIGIHE--HASIDLPGIKGLWPLR---SDSHHEMDNMLVLSFVGQTRVLMLNGEE 381
Query: 557 TDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF- 615
+ T+ GF D T CG VA L+QI +VRL A + + W
Sbjct: 382 VEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKE 431
Query: 616 PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
P +IS+ + N ++V+ L+ L +R + EM+H E++C+ I
Sbjct: 432 PNGKNISVASCNSNQVVVAVGRA--LYYLEIRPQELRQINCTEMEH-----EVACLDI 482
>gi|348560393|ref|XP_003465998.1| PREDICTED: DNA damage-binding protein 1-like [Cavia porcellus]
Length = 1140
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 26/235 (11%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R S LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPSRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ VGF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELVGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI 543
>gi|356576847|ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 193/454 (42%), Gaps = 96/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++ PI+DM V + +E+ Q++ CG P SLRI+R+G+++ ++
Sbjct: 393 LVRIDQVESLMPIMDMKVSNLFEEETPQIYTLCGRGPRSSLRILRTGLAVSEM--AVSKL 450
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
GI + WTV+ D + +++V+SF T VL +G +V+DS GF +LA L+
Sbjct: 451 PGIPSAVWTVKKNAIDEFDAYIVVSFTNATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSIS-LGAVAHNMIIVST 635
D L+Q+H N +R + G I W P +IS +G+ ++I +
Sbjct: 510 GDDSLMQVHPNGIR-----HIREDGRI-------NEWRTPGKRTISKVGSNRLQVVIALS 557
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
F + V ++ E++ + +++C+ I PE R+ S ++
Sbjct: 558 GGELIYFEVDVTG------QLMEVEKHEMSGDVACLDIAPV-PEGRQRSRFLA------- 603
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGC 749
+G++ ++ +LS P + ++ L+ S+ +L + ++ G
Sbjct: 604 --------------VGSYDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGE 649
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
D L ++ AGL+NG++ FR ++ +G
Sbjct: 650 DGADHPASL----FLNAGLQNGVM-------------------------FRTVVDMVTGQ 680
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
+ S +R +G+ L P+ M+ LS RPWL +
Sbjct: 681 LSDSR---------------SRFLGLRAPKLFPIIVRGKRAMLCLSSRPWLGYIHQGHFL 725
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ +A S +C +G++ VA +L +
Sbjct: 726 LTPLSYETLEYAASFSSDQCVEGVVAVAGEALRI 759
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNS 107
+G+ S ++V + ++L+ ++G +Q++ +FG I+ LA +F +
Sbjct: 19 NGNFSGGKSQEIVVARGKVLDLLRPDDNGRIQTILSVEIFGAIRSLA------QFRLMGA 72
Query: 108 QVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLI 167
Q KD +VV SDSG++ L + E + F + Q G R G+ LA+D G +
Sbjct: 73 Q---KDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVPGQYLAIDPKGRAV 129
Query: 168 AVSAYEDRLGLFSLSMSSGS 187
+ A E + ++ L+ + +
Sbjct: 130 MIGACEKQKLVYVLNRDTAA 149
>gi|393217872|gb|EJD03361.1| hypothetical protein FOMMEDRAFT_108572 [Fomitiporia mediterranea
MF3/22]
Length = 1213
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 188/454 (41%), Gaps = 98/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVD-YHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
LV I+++ PI+D V++ + Q+FA CG S R +R G+ +E+++ +
Sbjct: 409 LVLADEIESLDPIIDSKVMNILPNSDTPQIFAACGRGARSSFRTLRHGLEVEEVVSSD-- 466
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT R+K DPY S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 467 LPGIPNAVWTTRIKEDDPYDSYIILSFVNGTLVLSIGETIEEVQDT-GFLSSAPTLAVQQ 525
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H +R + + +P I+ +T+
Sbjct: 526 IGSDALLQVHPQGIRHVLADRRVNEWRVPQG---------------------RTIVAATT 564
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
N + + +LS + +E+ L+ +L+ ++ +R+ S + +S VP
Sbjct: 565 NKRQVVV----ALSSAELVYFELD---LEGQLN------EYQDRKAMGSTVLALSVGEVP 611
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGC 749
P Y +G +V ++S P+ L ++ +I + + + ++I
Sbjct: 612 --PGRQRTPY-LAVGCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADMLDSSIDKN 668
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
P +V GL+NG+LLR + P++ +T
Sbjct: 669 QP---------TMFVNIGLQNGVLLR--------------TVLDPVNGQLTDTR------ 699
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
TR +G PV L+ + ++ ++ALS R WL T + L
Sbjct: 700 --------------------TRFLGTRPVKLMRVQVQRNSSILALSSRSWLNYTHQGLLH 739
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + F+ HA + CP+G++ ++ + L +
Sbjct: 740 FTPLIFETLDHAWEFSAELCPEGLIGISGSVLRI 773
>gi|255571318|ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus communis]
gi|223534048|gb|EEF35767.1| DNA repair protein xp-E, putative [Ricinus communis]
Length = 1033
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLRI+R+GI + + + + QGI G W+
Sbjct: 292 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 349
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
+R DP+ +FLV+SF+ ETR+L + L + + T+ GF V TL C LVQ+
Sbjct: 350 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHYAVYNQLVQV 409
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
++VRL T + + W P SI++ ++++T ++
Sbjct: 410 TSSSVRLVSST----------TRELQNEWHAPAGYSINVATANATQVLLATGGGHLVY-- 457
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISI 673
L + + +H +L+ E+SC+ I
Sbjct: 458 ----LEIGDGTLTHTKHAQLECEISCLDI 482
>gi|410974071|ref|XP_003993471.1| PREDICTED: DNA damage-binding protein 1 [Felis catus]
Length = 1193
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 381 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 440
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 441 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 498
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 499 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 548
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 549 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 596
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 597 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 639
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 640 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 669
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 670 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 708
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 709 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 754
>gi|149725200|ref|XP_001502072.1| PREDICTED: DNA damage-binding protein 1 [Equus caballus]
Length = 1140
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHAQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|16197726|emb|CAC94909.1| damaged-DNA recognition protein 1 [Mus musculus]
Length = 994
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 185/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPRA 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + + P L+ R + T VF A SDR
Sbjct: 617 ------NIETGLLSDRKKMTLGTQPTVLRTF--RSLSTTNVF-------------ACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++F+ + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNFKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|348526664|ref|XP_003450839.1| PREDICTED: DNA damage-binding protein 1-like [Oreochromis
niloticus]
Length = 1140
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 401 GEFFMI-----EIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLK-- 453
G FM+ E+ G+ K E L + + L +++ + +GD ++K
Sbjct: 278 GRLFMLLLEKEELMDGTVALKDLHVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLN 337
Query: 454 ----EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLE 509
E+ + N+ PI+DM VVD + + Q+ C G EGSLRIIR+GI +
Sbjct: 338 VDSNEQGSYVAVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIH 397
Query: 510 KLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
+ + GI G W +R + LVLSFV +TRVL + + T+ GF +
Sbjct: 398 E--HASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQ 455
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAH 628
T CG VA L+QI +VRL + S + + W P+ +IS+ A H
Sbjct: 456 QTFYCGNVAHQQLIQITSGSVRLVLQD----------SKTLVSEWKEPQGRNISVAACNH 505
Query: 629 NMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
++++ L+ L + + + EM+H E++C+ I
Sbjct: 506 TQVVLAVGRA--LYYLQILAGELKQISTTEMEH-----EVACLDI 543
>gi|413935524|gb|AFW70075.1| hypothetical protein ZEAMMB73_605375 [Zea mays]
Length = 1229
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 193/453 (42%), Gaps = 94/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ I+++ P++DM V + DE+ Q+F CG P +LRI+R G+++ ++ R+
Sbjct: 405 LMRIDEIESLMPVMDMRVANLFDEETPQLFTACGRGPRSTLRILRPGLAISEMARSMLPA 464
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ I WTV+ ++D + +++V+SF T VL +G +V+DS F +LA L+
Sbjct: 465 EPIA-VWTVKKNINDMFDAYIVVSFTNVTLVLSIGETIEEVSDSQ-FLDTTHSLAVTLLG 522
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSIS-LGAVAHNMIIVSTS 636
+ L+Q+H N +R + G + W P +I+ +G+ ++I +
Sbjct: 523 EDSLMQVHPNGIR-----HIREDGRV-------NEWRTPGKKTITKVGSNRLQVVIALSG 570
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
F + + ++ E++ + +++C++I PE R+ S ++
Sbjct: 571 GELIYFEMDMTG------QLMEVEKQDMSGDVACLAIAPV-PEGRQRSRFLA-------- 615
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGCI 750
+G++ ++ +LS P + L+ L+ S+ +L + ++ G
Sbjct: 616 -------------VGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGED 662
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
D L ++ AGL+NG+L R N + + ++
Sbjct: 663 GADYPANL----FLNAGLQNGVLFR------------------------TNVDMVTGQLS 694
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
T S R +G+ P L P S M+ LS RPWL +
Sbjct: 695 DTRS----------------RFLGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLL 738
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S A S +C +G++ VA ++L +
Sbjct: 739 TPLSCDTLESAASFSSDQCSEGVVAVAGDALRI 771
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 74 EDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEM 133
E G ++++ VFG I+ LA +F + KD LVV SDSG+L L + +
Sbjct: 57 ETGRLRTLLSVDVFGAIRSLA------QFRLTGAN---KDYLVVGSDSGRLVILEYSPDR 107
Query: 134 HRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGS 187
+R V Q G R G++LAVD G + ++A E + ++ L+ + +
Sbjct: 108 NRLDKVHQETFGKSGCRRIVPGQLLAVDPKGRALCIAALEKQKLVYVLNRDAAA 161
>gi|410045300|ref|XP_508472.4| PREDICTED: DNA damage-binding protein 1 [Pan troglodytes]
Length = 1107
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 335 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 394
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 395 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 452
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 453 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 502
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 503 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 550
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 551 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 593
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 594 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 623
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 624 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 662
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 663 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 708
>gi|45383688|ref|NP_989547.1| DNA damage-binding protein 1 [Gallus gallus]
gi|82098863|sp|Q805F9.1|DDB1_CHICK RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=Damage-specific DNA-binding
protein 1; AltName: Full=UV-damaged DNA-binding factor
gi|28375613|dbj|BAC56999.1| damaged-DNA binding protein DDB p127 subunit [Gallus gallus]
gi|53130071|emb|CAG31438.1| hypothetical protein RCJMB04_6h2 [Gallus gallus]
Length = 1140
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 109/235 (46%), Gaps = 26/235 (11%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDSHREMDNMLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ GF D T CG VA L+QI +VRL A + + W P
Sbjct: 446 TELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPNG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
+IS+ + N ++V+ L+ L +R + EM+H E++C+ I
Sbjct: 496 KNISVASCNSNQVVVAVGRA--LYYLEIRPQELRQINCTEMEH-----EVACLDI 543
>gi|355752055|gb|EHH56175.1| Damage-specific DNA-binding protein 1, partial [Macaca
fascicularis]
Length = 1125
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 313 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 372
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 373 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 430
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 431 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 480
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 481 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 528
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 529 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 571
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 572 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 601
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 602 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 640
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 641 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 686
>gi|119594339|gb|EAW73933.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_a [Homo
sapiens]
Length = 1094
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|221040048|dbj|BAH11787.1| unnamed protein product [Homo sapiens]
Length = 1092
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|297267724|ref|XP_001082958.2| PREDICTED: DNA damage-binding protein 1 [Macaca mulatta]
Length = 1092
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|197097564|ref|NP_001126613.1| DNA damage-binding protein 1 [Pongo abelii]
gi|75041202|sp|Q5R649.1|DDB1_PONAB RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|55732122|emb|CAH92767.1| hypothetical protein [Pongo abelii]
Length = 1140
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|355683071|gb|AER97036.1| damage-specific DNA binding protein 1, 127kDa [Mustela putorius
furo]
Length = 1122
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|148529014|ref|NP_001914.3| DNA damage-binding protein 1 [Homo sapiens]
gi|296218432|ref|XP_002807395.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
[Callithrix jacchus]
gi|397516558|ref|XP_003828491.1| PREDICTED: DNA damage-binding protein 1 [Pan paniscus]
gi|402893195|ref|XP_003909786.1| PREDICTED: DNA damage-binding protein 1 [Papio anubis]
gi|426368721|ref|XP_004051351.1| PREDICTED: DNA damage-binding protein 1 [Gorilla gorilla gorilla]
gi|12643730|sp|Q16531.1|DDB1_HUMAN RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=DNA damage-binding protein a;
Short=DDBa; AltName: Full=Damage-specific DNA-binding
protein 1; AltName: Full=HBV X-associated protein 1;
Short=XAP-1; AltName: Full=UV-damaged DNA-binding
factor; AltName: Full=UV-damaged DNA-binding protein 1;
Short=UV-DDB 1; AltName: Full=XPE-binding factor;
Short=XPE-BF; AltName: Full=Xeroderma pigmentosum group
E-complementing protein; Short=XPCe
gi|203282525|pdb|3E0C|A Chain A, Crystal Structure Of Dna Damage-Binding Protein 1(Ddb1)
gi|695362|gb|AAA62838.1| X-associated protein 1, partial [Homo sapiens]
gi|1052865|gb|AAC50349.1| DDBa p127 [Homo sapiens]
gi|15079750|gb|AAH11686.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|29792243|gb|AAH50530.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|30354567|gb|AAH51764.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|61354161|gb|AAX44048.1| damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|119594341|gb|EAW73935.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_c [Homo
sapiens]
gi|168275638|dbj|BAG10539.1| DNA damage-binding protein 1 [synthetic construct]
gi|189065506|dbj|BAG35345.1| unnamed protein product [Homo sapiens]
gi|355566436|gb|EHH22815.1| Damage-specific DNA-binding protein 1 [Macaca mulatta]
gi|380784123|gb|AFE63937.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|380808126|gb|AFE75938.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|380810144|gb|AFE76947.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|383408123|gb|AFH27275.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|410305600|gb|JAA31400.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
gi|410352015|gb|JAA42611.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
Length = 1140
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|400260815|pdb|4E54|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein
(Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna
Repair
gi|401871507|pdb|4E5Z|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein
(Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna
Repair
Length = 1150
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 338 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 397
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 398 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 455
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 456 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 505
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 506 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 553
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 554 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 596
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 597 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 626
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 627 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 665
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 666 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 711
>gi|361132523|pdb|4A0L|A Chain A, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
gi|361132525|pdb|4A0L|C Chain C, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
Length = 1144
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 332 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 391
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 392 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 449
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 450 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 499
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 500 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 547
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 548 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 590
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 591 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 620
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 621 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 659
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 660 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 705
>gi|73983859|ref|XP_533275.2| PREDICTED: DNA damage-binding protein 1 [Canis lupus familiaris]
gi|291409601|ref|XP_002721069.1| PREDICTED: damage-specific DNA binding protein 1 [Oryctolagus
cuniculus]
gi|301781686|ref|XP_002926259.1| PREDICTED: DNA damage-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 1140
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|119594342|gb|EAW73936.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_d [Homo
sapiens]
Length = 1146
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|321478392|gb|EFX89349.1| hypothetical protein DAPPUDRAFT_303178 [Daphnia pulex]
Length = 1215
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 183/447 (40%), Gaps = 81/447 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV +++++P+L + D +E Q++A CG + SLR++R G+ + ++ + +
Sbjct: 395 LVLVDEMESLSPVLACHIADLANEDTPQLYALCGRSSRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTVR + D + +++V+SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVRKRADDEFDAYIVVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLGCSSLG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D L+Q++ +R I + P +IS AV +++S +
Sbjct: 513 DNALLQVYPEGIR-----------HIRADRRINEWKSPGKRAISRCAVNQRQVVISLAGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ E+ ++ ER++ ++ + ++ ++V
Sbjct: 562 ELVYF-----------------------EMDPTGQLNEYTERKEMTAEVVCMALANV--- 595
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLT-NTMGTAISGCIPQDVRLV 757
P+G +G +V V+S P + L L+ ++ T ++ G +D
Sbjct: 596 PSGEQRSRFLAVGLADNTVRVISLDPNDCLTPLSMQALPATPESLCIVEMGGHDKDSETT 655
Query: 758 -LADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFE 816
+ Q ++ GL+NG+LLR + P++ +T
Sbjct: 656 GTSGQLFLNIGLQNGVLLR--------------TVLDPVTGDLADTR------------- 688
Query: 817 SKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQ 876
TR +G PV L + ++A+S R WL ++ +S+
Sbjct: 689 -------------TRYLGSRPVKLFRVMTQNHEAVLAISSRTWLSYYFQNRFHLAPLSYD 735
Query: 877 PSTHATPVCSVECPKGILFVAENSLNL 903
A+ S +CP+G++ +A N+L +
Sbjct: 736 SLEFASGFASEQCPEGVVAIASNTLRI 762
Score = 46.2 bits (108), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L + + ++Q G+ ++V + +E+V + G V ++ Q VFG
Sbjct: 2 YLYNLTLQRATGIIQAVQGNFSGTKQQEIVIARGKVLEIVKPDPNTGKVHTLLSQEVFGI 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ +++ + + N KD LVV SDSG++ L + + F V Q G
Sbjct: 62 IR--SIISF--RLTGGN-----KDYLVVGSDSGRIVILEYNAAKNVFDKVHQETYGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLS 182
R G+ +A+D G + +SA E + ++ L+
Sbjct: 113 RRIVPGQYMAIDPKGRAVMISAIEKQKLVYILN 145
>gi|384941436|gb|AFI34323.1| DNA damage-binding protein 1 [Macaca mulatta]
Length = 1140
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|221046711|pdb|3EI1|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 14 Bp 6-4
Photoproduct Containing Dna-Duplex
gi|221046715|pdb|3EI2|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Abasic Site
Containing Dna-Duplex
gi|221046719|pdb|3EI3|A Chain A, Structure Of The Hsddb1-Drddb2 Complex
Length = 1158
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 346 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 405
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 406 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 463
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 464 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 513
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 514 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 561
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 562 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 604
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 605 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 634
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 635 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 673
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 674 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 719
>gi|403255013|ref|XP_003920244.1| PREDICTED: DNA damage-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 1140
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|119594343|gb|EAW73937.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_e [Homo
sapiens]
Length = 896
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 84 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 143
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 144 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 201
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 202 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 251
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 252 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 299
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 300 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 342
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 343 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 372
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 373 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 411
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 412 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 457
>gi|74138855|dbj|BAE27231.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 183/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPNSLALANNSTLTI 701
>gi|431910407|gb|ELK13480.1| DNA damage-binding protein 1 [Pteropus alecto]
Length = 1143
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|359546285|pdb|4A11|A Chain A, Structure Of The Hsddb1-Hscsa Complex
gi|361132519|pdb|4A0K|C Chain C, Structure Of Ddb1-Ddb2-Cul4a-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
Length = 1159
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 347 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 406
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 407 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 464
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 465 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 514
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 515 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 562
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 563 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 605
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 606 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 635
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 636 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 674
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 675 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 720
>gi|358440066|pdb|4A0A|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.6 A Resolution (Cpd 3)
Length = 1159
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 347 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 406
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 407 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 464
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 465 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 514
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 515 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 562
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 563 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 605
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 606 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 635
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 636 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 674
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 675 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 720
>gi|281345356|gb|EFB20940.1| hypothetical protein PANDA_015888 [Ailuropoda melanoleuca]
Length = 1124
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 310 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 369
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 370 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 427
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 428 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 477
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 478 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 525
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 526 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 568
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 569 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 598
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 599 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 637
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 638 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 683
>gi|418316|sp|P33194.1|DDB1_CERAE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=DDBa; AltName:
Full=Damage-specific DNA-binding protein 1; AltName:
Full=UV-damaged DNA-binding protein 1; Short=UV-DDB 1
gi|304026|gb|AAA03021.1| UV-damaged DNA-binding protein [Chlorocebus aethiops]
Length = 1140
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|119594340|gb|EAW73934.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_b [Homo
sapiens]
Length = 923
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 111 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 170
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 171 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 228
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 229 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 278
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 279 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 326
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 327 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 369
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 370 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 399
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 400 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 438
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 439 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 484
>gi|344295432|ref|XP_003419416.1| PREDICTED: DNA damage-binding protein 1 [Loxodonta africana]
Length = 1140
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAQQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
++S+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNVSVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|74215029|dbj|BAE33503.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 183/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|358440070|pdb|4A0B|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
gi|358440072|pdb|4A0B|C Chain C, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
Length = 1159
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 347 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 406
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 407 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 464
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 465 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 514
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 515 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 562
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 563 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 605
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 606 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 635
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 636 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 674
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 675 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 720
>gi|449664009|ref|XP_004205855.1| PREDICTED: splicing factor 3B subunit 3-like [Hydra magnipapillata]
Length = 1213
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 181/453 (39%), Gaps = 92/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++API+ V D +E Q++A CG P SLR++R G+ + ++ + +
Sbjct: 387 LVLVDEMESLAPIMHCQVADLANEDTPQLYAACGRGPRSSLRVLRHGLEVSEMA-VSELP 445
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ +D +++V+SFV T VL +G +VTDS GF TL+C L+
Sbjct: 446 GNPNSVWTVKKNSTDEQDAYIVVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLG 504
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ L+QI+ + +R + P + I ++I T N
Sbjct: 505 EDALLQIYPDGIRHIRSDRRVNEWKTPGKKNI----------IQCAVNERQIVIALTGNE 554
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPA 697
F L +S ++ Y + + +++ C+++ H E+R + L+ N
Sbjct: 555 LVYFELD-QSGQLNEY----TERKEMSADVVCMALGPVHAGEQRSRFLAVGLIDN----- 604
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVL-------ASGSIVLTNTMGTAISGCI 750
+V ++S P + L L A S+ + GT +
Sbjct: 605 ------------------TVRIISLDPNDCLEPLSMQALPAAGESLCIIEMGGTEVG--- 643
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ A ++ GL NG+LLR + ++ +T
Sbjct: 644 -EKGTAGNAGGLFLNIGLANGVLLR--------------TVLDSVTGDLSDTR------- 681
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
R +G PV L + + ++A+S R WL T +
Sbjct: 682 -------------------IRYLGSKPVKLFNVKTYGCSSVLAMSSRTWLSYTYQSRFHL 722
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ +A+ S +CP+GI+ ++ N+L +
Sbjct: 723 TPLSYESLEYASSFASEQCPEGIVAISSNTLRI 755
>gi|358440058|pdb|4A08|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Duplex (
Purine At D-1 Position) At 3.0 A Resolution (Cpd 1)
gi|358440062|pdb|4A09|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 15 Bp Cpd-Duplex
(Purine At D-1 Position) At 3.1 A Resolution (Cpd 2)
Length = 1159
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 347 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 406
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 407 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 464
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 465 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 514
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 515 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 562
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 563 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 605
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 606 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 635
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 636 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 674
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 675 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 720
>gi|194389106|dbj|BAG61570.1| unnamed protein product [Homo sapiens]
Length = 1009
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 197 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 256
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 257 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 314
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 315 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 364
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 365 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 412
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 413 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 455
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 456 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 485
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 486 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 524
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 525 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 570
>gi|7657011|ref|NP_056550.1| DNA damage-binding protein 1 [Mus musculus]
gi|134034087|sp|Q3U1J4.2|DDB1_MOUSE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=Damage-specific DNA-binding
protein 1; AltName: Full=UV-damaged DNA-binding factor
gi|5931596|dbj|BAA84699.1| XPE UV-damaged DNA binding factor [Mus musculus]
gi|16307148|gb|AAH09661.1| Damage specific DNA binding protein 1 [Mus musculus]
gi|74182145|dbj|BAE34102.1| unnamed protein product [Mus musculus]
gi|74196166|dbj|BAE32993.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 183/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|148709424|gb|EDL41370.1| damage specific DNA binding protein 1 [Mus musculus]
Length = 968
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 183/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|335310432|ref|XP_003362030.1| PREDICTED: splicing factor 3B subunit 3-like [Sus scrofa]
Length = 701
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 128/577 (22%), Positives = 228/577 (39%), Gaps = 104/577 (18%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTGG----- 73
Query: 107 SQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCL 166
KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 74 ----TKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRA 129
Query: 167 IAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFIS 226
+ +SA E + ++ L+ + + ++ S E + + + + + F
Sbjct: 130 VMISAIEKQKLVYILNRDAAA-----RLTISSPLEAHKANTLVYHVVGVDVGFENPMFAC 184
Query: 227 TDPRQPSKEHNPILAIILNRRGALLNELLLVGWN--IREHAISVLSCFFEAGPLAHCVVE 284
+ +++P N + L L +G N +R+++ +++ F H ++
Sbjct: 185 LEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYS-QIIAEF-------HFLLT 236
Query: 285 VPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDE---SC----R 337
VP PS V S N+ + +NF D+ C R
Sbjct: 237 VPGG-------------------SDGPSGVLICSENY----ITYKNFGDQPDIRCPIPRR 273
Query: 338 VHDVDDEGLFNVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFC 397
+D+DD + C+ A +K + + + E I K+
Sbjct: 274 RNDLDDPERGMIFVCS------------------ATHKTKSMFFFLAQTEQGDIFKIT-- 313
Query: 398 VDTGEFFMIEIAFGS-DGHKVHLSECLYKGPPCKALLWVEGRF----LSAFVEMGD---- 448
++T E + EI D V + C+ K L+V F L +GD
Sbjct: 314 LETDEDMVTEIRLKYFDTVPVAAAMCVLK----TGFLFVASEFGNHYLYQIAHLGDDDEE 369
Query: 449 -----GMVLKEENGRLVYTSPIQN---------IAPILDMSVVDYHDEKRDQMFACCGVA 494
M L+E + P++N ++PIL + D +E Q++ CG
Sbjct: 370 PEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQLYVACGRG 429
Query: 495 PEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGL 554
P SLR++R G+ + + + + + WTVR + D + +++++SFV T VL +G
Sbjct: 430 PRSSLRVLRHGLEVSE-MAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGE 488
Query: 555 NFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVR 591
+VTDS GF TL+C L+ D LVQ++ + +R
Sbjct: 489 TVEEVTDS-GFLGTTPTLSCSLLGDDALVQVYPDGIR 524
>gi|224050582|ref|XP_002191856.1| PREDICTED: DNA damage-binding protein 1 [Taeniopygia guttata]
Length = 1140
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 32/238 (13%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYH---SFLVLSFVEETRVLRVGLNF 556
RIIR+GI + + + GI G W +R SDP+ + LVLSFV +TRVL +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLR---SDPHRETDNTLVLSFVGQTRVLMLNGEE 442
Query: 557 TDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF- 615
+ T+ GF D T CG VA L+QI +VRL P S + + W
Sbjct: 443 VEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQE--------PKS--LVSEWKE 492
Query: 616 PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
P +IS+ + N ++V+ L+ L +R + EM+H E++C+ I
Sbjct: 493 PNGKNISVASCNSNQVVVAVGRA--LYYLEIRPQELRQISCTEMEH-----EVACLDI 543
>gi|2632123|emb|CAA05770.1| Xeroderma Pigmentosum Group E Complementing protein [Homo sapiens]
Length = 1140
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 184/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTGMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|47230701|emb|CAF99894.1| unnamed protein product [Tetraodon nigroviridis]
Length = 953
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+DM VVD + + Q+ C G EGSLRIIR+GI + + + GI G W
Sbjct: 225 NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHE--HASIDLPGIKGLWP 282
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
+R + LVLSFV +TRVL + + T+ GF + T CG VA L+QI
Sbjct: 283 LRSEAGRETDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHNQLIQIT 342
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILG 645
+VRL + S + + W P+ +IS+ A H ++++ L+ L
Sbjct: 343 SGSVRLVLQD----------SKALVSEWREPQGRNISVAACNHTQVVLAVGRA--LYYLQ 390
Query: 646 VRSLSVSHYEIYEMQHMRLQSELSCISI 673
+ + + EM+H E++C+ I
Sbjct: 391 ILAGELKQISTTEMEH-----EVACLDI 413
>gi|297598550|ref|NP_001045829.2| Os02g0137400 [Oryza sativa Japonica Group]
gi|255670583|dbj|BAF07743.2| Os02g0137400 [Oryza sativa Japonica Group]
Length = 845
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 186/449 (41%), Gaps = 86/449 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L I+++ PI+DM V + DE+ Q+F CG P +LRI+R G+++ ++ R+
Sbjct: 20 LYRIDEIESLMPIMDMRVANLFDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPA 79
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ I WTV+ ++D + +++V+SF T VL +G +V+DS F +LA L+
Sbjct: 80 EPI-AVWTVKKNINDMFDAYIVVSFANVTLVLSIGETIEEVSDS-QFLDTTHSLAVSLLG 137
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSIS-LGAVAHNMIIVSTS 636
+ L+Q+H N +R + G + W P +I+ +G+ ++I +
Sbjct: 138 EDSLMQVHPNGIR-----HIREDGRV-------NEWRTPGKKTITKVGSNRLQVVIALSG 185
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
F + + ++ E++ + +++C++I +P+
Sbjct: 186 GELIYFEMDMTG------QLMEVEKQDMSGDVACLAI-----------APV--------- 219
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI--VLTNTMGTAISGCIPQDV 754
P G +G+ ++ +LS P + L+ L+ S+ + M + + +
Sbjct: 220 --PEGRQRSRFLAVGSFDNTIRILSVDPDDCLQPLSVQSVSSAPESLMFLEVQASVGGED 277
Query: 755 RLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSS 814
++ AGL+NG+L R N + + ++ T S
Sbjct: 278 GADHPANLFLNAGLQNGVLFR------------------------TNVDMVTGQLSDTRS 313
Query: 815 FESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSIS 874
R +G+ P L P S M+ LS RPWL + T +S
Sbjct: 314 ----------------RFLGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLS 357
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
A S +C +G++ VA ++L +
Sbjct: 358 CDTLESAASFSSDQCSEGVVAVAGDALRI 386
>gi|374095609|gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
Length = 1212
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/454 (21%), Positives = 191/454 (42%), Gaps = 96/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++ PI+DM +++ +E+ Q+F CG P SLRI+R G+++ ++
Sbjct: 393 LVRIDQVESLMPIMDMKIINLFEEETPQIFTLCGRGPRSSLRILRPGLAISEM--AVSQL 450
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WTV+ V+D + +++V+SF T VL +G +V+DS GF +LA L+
Sbjct: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP--EHVSISLGAVAHNMIIVST 635
D L+Q+H + +R + G I W + + +G+ ++I +
Sbjct: 510 GDDSLMQVHPSGIR-----HIREDGRI-------NEWRTPGKRTIVKVGSNRLQVVIALS 557
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
F + + ++ E++ + +++C+ I PE R+ S ++
Sbjct: 558 GGEIIYFEVDMTG------QLMEVEKQEMSGDVACLDIAPV-PEGRQRSRFLA------- 603
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGC 749
+G++ + +LS P + ++VL+ S+ +L + ++ G
Sbjct: 604 --------------VGSYDNCIRILSLDPDDCMQVLSLQSVSSPPESLLFLEVQASVGGE 649
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
D L ++ AGL+NG+L R + ++ + + G+
Sbjct: 650 DGADHPASL----FLNAGLQNGVLFR--------------TVVDMVTGQLSDARSRFLGL 691
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
A F +I RR M+ LS RPWL +
Sbjct: 692 RAPKLFSV---------IIRGRRA-----------------MLCLSSRPWLGYIHQGHFL 725
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A S +C +G++ VA ++L +
Sbjct: 726 LTPLSYETLEFAASFSSDQCAEGVVAVAGDALRV 759
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 32 YLAKCVLKGSVVLQVA-HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
YL L+ + + A +G+ S ++ + ++L+ E+G +Q++ +FG I
Sbjct: 2 YLYNLTLQQATGIVCAINGNFSGGKSQEIAVARGKVLDLLRPDENGKIQTILSVEIFGAI 61
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
+ LA +F SQ KD +VV SDSG++ L + E + F V Q G
Sbjct: 62 RSLA------QFRLTGSQ---KDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCR 112
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGS 187
R G+ LA+D G + + A E + ++ L+ + +
Sbjct: 113 RIVPGQYLAIDPKGRAVMIGACEKQKLVYVLNRDTAA 149
>gi|410912407|ref|XP_003969681.1| PREDICTED: DNA damage-binding protein 1-like [Takifugu rubripes]
Length = 1140
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+DM VVD + + Q+ C G EGSLRIIR+GI + + + GI G W
Sbjct: 355 NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHE--HASIDLPGIKGLWP 412
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
+R + LVLSFV +TRVL + + T+ GF + T CG VA L+QI
Sbjct: 413 LRSEAGRETDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHNQLIQIT 472
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILG 645
+VRL + S + + W P+ +IS+ A H ++++ L+ L
Sbjct: 473 SGSVRLVLQD----------SKALVSEWKEPQGRNISVAACNHTQVVLAVGRA--LYYLQ 520
Query: 646 VRSLSVSHYEIYEMQHMRLQSELSCISI 673
+ + + EM+H E++C+ I
Sbjct: 521 ILAGELKQISTTEMEH-----EVACLDI 543
>gi|195376606|ref|XP_002047087.1| GJ13230 [Drosophila virilis]
gi|194154245|gb|EDW69429.1| GJ13230 [Drosophila virilis]
Length = 1229
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 176/461 (38%), Gaps = 96/461 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ ++ D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVKKRIDDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLCCAALG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQ++ + +R S W P SI+ AV ++++ S
Sbjct: 513 DDALVQVYPDGIRHIR------------SDKRVNEWKAPGKKSITKCAVNQRQVVITLSG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ + ++ Y + + +E+ C+++
Sbjct: 561 RELVYFEMDPTGELNEY----TERSEMPAEIMCMAL----------------------GT 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSF---------------VPKEGLRVLASGSIVLTNTM 742
+P G + +G +V +LS P E L ++ G T
Sbjct: 595 VPEGEQRSWFLAVGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTNA 654
Query: 743 GTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNT 802
G A Q Y+ GL NG+LLR + P+S +T
Sbjct: 655 GGADDDVPAQRSGGSNKGTIYLNIGLSNGVLLR--------------TVLDPVSGDLADT 700
Query: 803 ENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQ 862
TR +G PV L + ++A+S R WL
Sbjct: 701 R--------------------------TRYLGSRPVKLFRIKMQGAEAVLAMSSRTWLSY 734
Query: 863 TARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 735 YHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 775
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L KG+ V HG+ +V+ + S+EL+ + G V ++ +FG
Sbjct: 2 YLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFGC 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +VV SDSG++ L + + V Q G
Sbjct: 62 IRALMAFRLTGG---------TKDYIVVGSDSGRIVILEYIPSKNSLEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDR 175
R G+ A+D G + + A E +
Sbjct: 113 RRIVPGQYFAIDPKGRAVMIGAVEKQ 138
>gi|326497839|dbj|BAJ94782.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1227
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 193/453 (42%), Gaps = 94/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I+++ PI+DM + + DE+ Q++ CG +LRI+R G+++ ++ R+
Sbjct: 404 LVRIDEIESLMPIMDMRIANLFDEETPQVYTACGRGSRSTLRILRPGLAISEMARSMLPA 463
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ I WTV+ ++D + +++V+SF T VL +G +V+DS F +LA L+
Sbjct: 464 EPIA-VWTVKKNINDMFDAYIVVSFANVTLVLSIGETIEEVSDS-HFLDTTHSLAVSLLG 521
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSIS-LGAVAHNMIIVSTS 636
+ L+Q+H N +R + G + W P +I+ +G+ ++I +
Sbjct: 522 EDSLMQVHPNGIR-----HIREDGRV-------NEWRTPGKKTITKVGSNRLQVVIALSG 569
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
F + + ++ E++ + +++C++I PE R+ S ++
Sbjct: 570 GELIYFEMDMTG------QLMEVEKQDMSGDVACLAIAPV-PEGRQRSRFLA-------- 614
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGCI 750
+G++ ++ +LSF P + L+ L+ S+ +L + ++ G
Sbjct: 615 -------------VGSYDNTIRILSFDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGED 661
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
D L ++ AGL+NG+L R N + + ++
Sbjct: 662 GADYPANL----FLNAGLQNGVLFR------------------------TNVDMVTGQLS 693
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
T S R +G+ P L P S M+ LS RPWL +
Sbjct: 694 DTRS----------------RFLGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLL 737
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S A S +C +G++ VA ++L +
Sbjct: 738 TPLSCDTLESAASFSSDQCSEGVVAVAGDALRI 770
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 74 EDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEM 133
E G ++++ VFG I+ LA +F + KD LVV SDSG+L L + +
Sbjct: 56 ETGRLRTLLSVDVFGAIRSLA------QFRLTGAT---KDYLVVGSDSGRLVILEYSPDR 106
Query: 134 HRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGS 187
+RF V Q G R G++L+VD G + ++A E + ++ L+ + +
Sbjct: 107 NRFDKVHQETFGKSGCRRIVPGQLLSVDPKGRALCIAALEKQKLVYVLNRDASA 160
>gi|194749950|ref|XP_001957397.1| GF24063 [Drosophila ananassae]
gi|190624679|gb|EDV40203.1| GF24063 [Drosophila ananassae]
Length = 1228
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 182/460 (39%), Gaps = 95/460 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLCCAALG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQ++ + +R S W P SI+ AV ++++ S
Sbjct: 513 DDALVQVYPDGIRHIR------------SDKRVNEWKAPGKKSITKCAVNQRQVVITLSG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ + ++ Y + + +E+ C+++
Sbjct: 561 RELVYFEMDPTGELNEY----TERSEMPAEIMCMAL----------------------GT 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGS-----IVLTNTMGTAIS 747
+P G + +G +V +LS P ++ L S + + + +T T +
Sbjct: 595 VPEGEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTSA 654
Query: 748 GCIPQDVRLVLADQ----FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTE 803
G + +D + Y+ GL NG+LLR + P+S +T
Sbjct: 655 GGVNEDAPAQRSGSNKGTIYLNIGLSNGVLLR--------------TVLDPVSGDLADTR 700
Query: 804 NIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQT 863
TR +G PV L + ++A+S R WL
Sbjct: 701 --------------------------TRYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYY 734
Query: 864 ARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 735 HQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 774
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L KG+ V HG+ +V+ + S+EL+ + G V ++ +FG
Sbjct: 2 YLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLMSTEIFGC 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +VV SDSG++ L + + V Q G
Sbjct: 62 IRALMAFRLTGG---------TKDYIVVGSDSGRIVILEYIPSKNALEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDR 175
R G+ A+D G + + A E +
Sbjct: 113 RRIVPGQYFAIDPKGRAVMIGAVEKQ 138
>gi|307166104|gb|EFN60356.1| Splicing factor 3B subunit 3 [Camponotus floridanus]
Length = 1201
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/486 (22%), Positives = 194/486 (39%), Gaps = 109/486 (22%)
Query: 436 EGRFLSAF-VEMGDGMVLKEENGR-LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
E F SA +E GD R LV + +++PI+ V D +E Q++ CG
Sbjct: 354 EPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDTPQLYIACGR 413
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
P +LR++R G+ + ++ + + WTV+ ++ + Y +++++SFV T VL +G
Sbjct: 414 GPRSTLRVLRHGLEVSEMA-VSELPGNPNAVWTVKRRIDEEYDAYIIVSFVNATLVLSIG 472
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
+VTDS GF TL+C + + LVQ++ + +R I V
Sbjct: 473 ETVEEVTDS-GFLGTTPTLSCSALGEDALVQVYPDGIR-----------HIRADKRVNEW 520
Query: 614 WFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
P +I AV ++++ + ++ + ++ Y + ++ SE+ C+++
Sbjct: 521 KAPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEY----TERKKMPSEVMCMAL 576
Query: 674 P----------------QKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSV 717
Q + R S P ++ S+ ALPA
Sbjct: 577 GNVAVGEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAA--------------- 621
Query: 718 EVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFE 777
E L ++ G+ N+ +A PQ L Y+ GL+NG+LLR
Sbjct: 622 --------ESLCIVEMGAKEADNSEDSA-----PQQSSL------YLNIGLQNGVLLR-- 660
Query: 778 WPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITP 837
+ PIS +T TR +G P
Sbjct: 661 ------------TVLDPISGDLADTR--------------------------TRYLGSRP 682
Query: 838 VFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVA 897
V L + + ++A+S R WL ++ T +S++ A+ S +CP+GI+ ++
Sbjct: 683 VKLFRIRMQGNQAVLAMSSRSWLSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAIS 742
Query: 898 ENSLNL 903
N+L +
Sbjct: 743 TNTLRI 748
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 11/142 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L + + + HG+ +++ + S+EL+ + G V ++ VFG
Sbjct: 2 YLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFGI 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L F + KD +VV SDSG++ L + + F V Q G
Sbjct: 62 IRSLMA------FRLTGAT---KDYIVVGSDSGRIVILEYIPAKNMFDKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSA 171
R G+ LA+D G + + A
Sbjct: 113 RRIVPGQYLAIDPKGRAVMIEA 134
>gi|223647932|gb|ACN10724.1| DNA damage-binding protein 1 [Salmo salar]
Length = 1139
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+DM VVD + + Q+ C G EGSLRIIR+GI + + + GI G W
Sbjct: 355 NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHE--HASIDLPGIKGLWP 412
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
+R + LVLSFV +TRVL + + T+ GF ++ T CG VA L+QI
Sbjct: 413 LRSEAGRETDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNLQTFYCGNVAHQQLIQIT 472
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILG 645
VRL M S + + W P+ +IS+ A + ++++ L+ L
Sbjct: 473 SGGVRLVMQD----------SKALVSEWKEPQGRNISVAACNSSQVVLAVGRA--LYYLQ 520
Query: 646 VRSLSVSHYEIYEMQHMRLQSELSCISI 673
+ S + EM+H E++C+ I
Sbjct: 521 ILSGELKQISTVEMEH-----EVACLDI 543
>gi|259155222|ref|NP_001158852.1| DNA damage-binding protein 1 [Salmo salar]
gi|223647700|gb|ACN10608.1| DNA damage-binding protein 1 [Salmo salar]
Length = 1139
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+DM VVD + + Q+ C G EGSLRIIR+GI + + + GI G W
Sbjct: 355 NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHE--HASIDLPGIKGLWP 412
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
+R + LVLSFV +TRVL + + T+ GF ++ T CG VA L+QI
Sbjct: 413 LRSEAGRETDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNLQTFYCGNVAHQQLIQIT 472
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILG 645
VRL M S + + W P+ +IS+ A + ++++ L+ L
Sbjct: 473 SGGVRLVMQD----------SKALVSEWKEPQGRNISVAACNSSQVVLAVGRA--LYYLQ 520
Query: 646 VRSLSVSHYEIYEMQHMRLQSELSCISI 673
+ S + EM+H E++C+ I
Sbjct: 521 ILSGELKQISTVEMEH-----EVACLDI 543
>gi|444513057|gb|ELV10249.1| DNA damage-binding protein 1 [Tupaia chinensis]
Length = 1146
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 26/235 (11%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI 543
>gi|5353754|gb|AAD42230.1|AF159853_1 damage-specific DNA binding protein 1 [Mus musculus]
Length = 1140
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 26/235 (11%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI 543
>gi|74178494|dbj|BAE32502.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 26/235 (11%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI 543
>gi|327278830|ref|XP_003224163.1| PREDICTED: DNA damage-binding protein 1-like [Anolis carolinensis]
Length = 1140
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 113/238 (47%), Gaps = 32/238 (13%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYH---SFLVLSFVEETRVLRVGLNF 556
RIIR+GI + + + GI G W +R SDP+H + LVLSFV +TRVL +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLR---SDPHHETDNTLVLSFVGQTRVLMLNGEE 442
Query: 557 TDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF- 615
+ T+ GF D T CG VA L+QI +VRL A + + W
Sbjct: 443 VEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVTQEPKA----------LVSEWKE 492
Query: 616 PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
P +IS+ + + ++V+ L+ L + + EM+H E++C+ I
Sbjct: 493 PNGKNISVASCNSSQVVVAVGR--VLYYLEIHPQELKQISCTEMEH-----EVACLDI 543
>gi|195126264|ref|XP_002007593.1| GI12293 [Drosophila mojavensis]
gi|193919202|gb|EDW18069.1| GI12293 [Drosophila mojavensis]
Length = 1227
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 181/459 (39%), Gaps = 94/459 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ ++ D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVKKRIDDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLCCAALG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQ++ + +R S W P SI+ AV ++++ S
Sbjct: 513 DDALVQVYPDGIRHIR------------SDKRVNEWKAPGKKSITKCAVNQRQVVITLSG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ + ++ Y + + +E+ C+++
Sbjct: 561 RELVYFEMDPTGELNEY----TERSEMPAEIMCMAL----------------------GT 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGS-----IVLTNTMGTAIS 747
+P G + +G +V +LS P ++ L S + + + +T T +
Sbjct: 595 VPEGEQRSWFLAVGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTNA 654
Query: 748 GC---IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTEN 804
G +P Y+ GL NG+LLR + P+S +T
Sbjct: 655 GADDDVPAQRSGSNKGTIYLNIGLSNGVLLR--------------TVLDPVSGDLADTR- 699
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA 864
TR +G PV L + ++A+S R WL
Sbjct: 700 -------------------------TRYLGSRPVKLFRIKMQGAEAVLAMSSRTWLSYYH 734
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 735 QNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 773
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L KG+ V HG+ +V+ + S+EL+ + G V ++ +FG
Sbjct: 2 YLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFGC 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +VV SDSG++ L + + V Q G
Sbjct: 62 IRALMAFRLTGG---------TKDYIVVGSDSGRIVILEYMPSKNALEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDR 175
R G+ A+D G + + A E +
Sbjct: 113 RRIVPGQYFAIDPKGRAVMIGAVEKQ 138
>gi|449283451|gb|EMC90093.1| DNA damage-binding protein 1 [Columba livia]
Length = 1140
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 109/235 (46%), Gaps = 26/235 (11%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 317 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 376
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 377 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDAHRETDNMLVLSFVGQTRVLMLNGEEVEE 434
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ GF D T CG VA L+QI +VRL A + + W P
Sbjct: 435 TELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPNG 484
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
+IS+ + + ++V+ L+ L +R + EM+H E++C+ I
Sbjct: 485 KNISVASCNSSQVVVAVGRA--LYYLEIRPQELRQISCTEMEH-----EVACLDI 532
>gi|125580741|gb|EAZ21672.1| hypothetical protein OsJ_05303 [Oryza sativa Japonica Group]
Length = 1224
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 188/449 (41%), Gaps = 86/449 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L I+++ PI+DM V + DE+ Q+F CG P +LRI+R G+++ ++ R+
Sbjct: 399 LYRIDEIESLMPIMDMRVANLFDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPA 458
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ I WTV+ ++D + +++V+SF T VL +G +V+DS F +LA L+
Sbjct: 459 EPI-AVWTVKKNINDMFDAYIVVSFANVTLVLSIGETIEEVSDS-QFLDTTHSLAVSLLG 516
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSIS-LGAVAHNMIIVSTS 636
+ L+Q+H N +R + G + W P +I+ +G+ ++I +
Sbjct: 517 EDSLMQVHPNGIR-----HIREDGRV-------NEWRTPGKKTITKVGSNRLQVVIALSG 564
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
F + + ++ E++ + +++C++I PE R+ S ++
Sbjct: 565 GELIYFEMDMTG------QLMEVEKQDMSGDVACLAIAPV-PEGRQRSRFLA-------- 609
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI--VLTNTMGTAISGCIPQDV 754
+G+ ++ +LS P + L+ L+ S+ + M + + +
Sbjct: 610 -------------VGSFDNTIRILSVDPDDCLQPLSVQSVSSAPESLMFLEVQASVGGED 656
Query: 755 RLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSS 814
++ AGL+NG+L R N + + ++ T S
Sbjct: 657 GADHPANLFLNAGLQNGVLFR------------------------TNVDMVTGQLSDTRS 692
Query: 815 FESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSIS 874
R +G+ P L P S M+ LS RPWL + T +S
Sbjct: 693 ----------------RFLGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLS 736
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
A S +C +G++ VA ++L +
Sbjct: 737 CDTLESAASFSSDQCSEGVVAVAGDALRI 765
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 112 KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSA 171
KD LVV SDSG+L L + + +R V Q G R G++LAVD G + ++A
Sbjct: 80 KDYLVVGSDSGRLVILEYSPDRNRLDKVHQETFGKSGCRRIVPGQLLAVDPKGRALCIAA 139
Query: 172 YEDRLGLFSLSMSSGS 187
E + ++ L+ + +
Sbjct: 140 LEKQKLVYVLNRDAAA 155
>gi|42409127|dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa
Japonica Group]
gi|42409258|dbj|BAD10521.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa
Japonica Group]
gi|125538000|gb|EAY84395.1| hypothetical protein OsI_05771 [Oryza sativa Indica Group]
Length = 1234
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 188/449 (41%), Gaps = 86/449 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L I+++ PI+DM V + DE+ Q+F CG P +LRI+R G+++ ++ R+
Sbjct: 409 LYRIDEIESLMPIMDMRVANLFDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPA 468
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ I WTV+ ++D + +++V+SF T VL +G +V+DS F +LA L+
Sbjct: 469 EPI-AVWTVKKNINDMFDAYIVVSFANVTLVLSIGETIEEVSDS-QFLDTTHSLAVSLLG 526
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSIS-LGAVAHNMIIVSTS 636
+ L+Q+H N +R + G + W P +I+ +G+ ++I +
Sbjct: 527 EDSLMQVHPNGIR-----HIREDGRV-------NEWRTPGKKTITKVGSNRLQVVIALSG 574
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
F + + ++ E++ + +++C++I PE R+ S ++
Sbjct: 575 GELIYFEMDMTG------QLMEVEKQDMSGDVACLAIAPV-PEGRQRSRFLA-------- 619
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI--VLTNTMGTAISGCIPQDV 754
+G+ ++ +LS P + L+ L+ S+ + M + + +
Sbjct: 620 -------------VGSFDNTIRILSVDPDDCLQPLSVQSVSSAPESLMFLEVQASVGGED 666
Query: 755 RLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSS 814
++ AGL+NG+L R N + + ++ T S
Sbjct: 667 GADHPANLFLNAGLQNGVLFR------------------------TNVDMVTGQLSDTRS 702
Query: 815 FESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSIS 874
R +G+ P L P S M+ LS RPWL + T +S
Sbjct: 703 ----------------RFLGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLS 746
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
A S +C +G++ VA ++L +
Sbjct: 747 CDTLESAASFSSDQCSEGVVAVAGDALRI 775
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 56 SNDVVFGKETSIELVIIG-EDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDL 114
+ ++ + T++EL+ E G ++++ VFG I+ LA +F + KD
Sbjct: 42 TQEIAVARGTTLELLRPDPETGRLRTLLSVDVFGAIRSLA------QFRLTGAT---KDY 92
Query: 115 LVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYED 174
LVV SDSG+L L + + +R V Q G R G++LAVD G + ++A E
Sbjct: 93 LVVGSDSGRLVILEYSPDRNRLDKVHQETFGKSGCRRIVPGQLLAVDPKGRALCIAALEK 152
Query: 175 RLGLFSLSMSSGS 187
+ ++ L+ + +
Sbjct: 153 QKLVYVLNRDAAA 165
>gi|241260143|ref|XP_002404926.1| DNA repair protein xp-E, putative [Ixodes scapularis]
gi|215496735|gb|EEC06375.1| DNA repair protein xp-E, putative [Ixodes scapularis]
Length = 1148
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 181/464 (39%), Gaps = 100/464 (21%)
Query: 446 MGDGMVLK---EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E N + Y ++ N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 330 LGDSQLIKLNSERNEQGSYVEVMEVFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 389
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R+ + LVLSFV +TRVL + +
Sbjct: 390 RIIRNGIGIHE--HASIDLPGIKGIWPLRVNTDSSRDNTLVLSFVGQTRVLMLSGEEVEE 447
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ GF T CG V + L+Q+ AVRL G L + W P
Sbjct: 448 TELAGFDISQQTFFCGNVRNNQLIQVTAAAVRLV-------DGKTKL---LLNEWKPPGG 497
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI-PQKH 677
+IS+ N ++ + F L ++ + + + +++E++C+ I P
Sbjct: 498 KNISVVTCNQNQVVCAVRQEVF-------CLEIADGTLKQTSNAEMENEVACLDITPLND 550
Query: 678 PERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIV 737
+ + L ++ S+ L PS+E L KE + G I+
Sbjct: 551 GSGKSDLCAVGLWTDISIRVL--------------RLPSLEQLQ---KENI----GGEII 589
Query: 738 LTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
+ + T G Y+L L +G L F
Sbjct: 590 PRSILMTTFEGV------------HYLLCALGDGSLFYFLLD------------------ 619
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
A+T + + ++ +G P L +++ A SDR
Sbjct: 620 ------------ASTGAVSDRKKVT----------LGTQPTVLKTFKSLSTSNVFACSDR 657
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSL 901
P ++ ++ H L +++++ + H P+ S P + + +L
Sbjct: 658 PTVIYSSNHKLVFSNVNLKEVNHMCPLNSEGYPDSLALANDGTL 701
>gi|432089478|gb|ELK23419.1| DNA damage-binding protein 1 [Myotis davidii]
Length = 1047
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 183/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPTRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ GF + T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELTGFVDEQQTFFCGNVAHQQLIQITSASVRLVSQDPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALY-------CLQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|345328202|ref|XP_003431248.1| PREDICTED: DNA damage-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 1045
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 26/235 (11%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 233 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 292
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 293 RIIRNGIGIHE--HASIDLPGIKGLWPLRSNSNRETDDTLVLSFVGQTRVLMLNGEEVEE 350
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ GF + T CG VA L+QI +VRL A + + W P+
Sbjct: 351 TELTGFVDNQQTFFCGNVAHQQLIQITSASVRLVTQEPKA----------LVSEWKEPQG 400
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 401 KNISVASCNSSQVVVAVGRALYY-------LQIHPRELRQISHTEMEHEVACLDI 448
>gi|195012560|ref|XP_001983703.1| GH16029 [Drosophila grimshawi]
gi|193897185|gb|EDV96051.1| GH16029 [Drosophila grimshawi]
Length = 1228
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 182/460 (39%), Gaps = 95/460 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ ++ D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVKKRIDDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLCCAALG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQ++ + +R S W P SI+ AV ++++ S
Sbjct: 513 DDALVQVYPDGIRHIR------------SDKRVNEWKAPGKKSITKCAVNQRQVVITLSG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ + ++ Y + + +E+ C+++
Sbjct: 561 RELVYFEMDPTGELNEY----TERSEMPAEIMCMAL----------------------GT 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGS-----IVLTNTMGTAIS 747
+P G + +G +V +LS P ++ L S + + + +T T +
Sbjct: 595 VPEGEQRSWFLAVGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTNA 654
Query: 748 GCIPQDVRLVLADQ----FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTE 803
+DV + Y+ GL NG+LLR + P+S +T
Sbjct: 655 SGADEDVPAQRSGSNKGTIYLNIGLSNGVLLR--------------TVLDPVSGDLADTR 700
Query: 804 NIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQT 863
TR +G PV L + ++A+S R WL
Sbjct: 701 --------------------------TRYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYY 734
Query: 864 ARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 735 HQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 774
Score = 42.7 bits (99), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L KG+ V HG+ +V+ + S+EL+ + G V ++ +FG
Sbjct: 2 YLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFGC 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +V+ SDSG++ L + + V Q G
Sbjct: 62 IRALMAFRLTGG---------TKDYIVIGSDSGRIVILEYIPSKNSLEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDR 175
R G+ A+D G + + A E +
Sbjct: 113 RRIVPGQYFAIDPKGRAVMIGAVEKQ 138
>gi|193644722|ref|XP_001942922.1| PREDICTED: DNA damage-binding protein 1-like [Acyrthosiphon pisum]
Length = 1156
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 28/268 (10%)
Query: 430 KALLWVEGRFLSAFVEMGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEK 483
++L +++ + + +GD ++K + + N+ PI+DM V+D +
Sbjct: 314 ESLTYLDNKIIYVASRVGDSQLIKLNKKPDQFGSHITVLDTFMNLGPIVDMCVIDLERQG 373
Query: 484 RDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSF 543
+ Q+ C G EGSLRIIR+GI ++++ + GI G W +R+ LVLSF
Sbjct: 374 QGQVVTCSGAYKEGSLRIIRNGIGIQEVATIDLV--GIKGMWPLRITTDSLLDDTLVLSF 431
Query: 544 VEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRL-CMPTMVAHSG 602
V +RVL + D GF+ ++ T CG +D +VQI +VRL C+
Sbjct: 432 VGHSRVLAYSGEEVEEIDLEGFQSELQTFYCGNTSDNKMVQITSASVRLICLE------- 484
Query: 603 GIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQH 661
S + + W P+ SI++ + + + +T N + +G + +
Sbjct: 485 ----SKCLVSEWNVPDGKSINVVSCNGHQAVCATGNSLYYIEIGTDKVDQKGF------- 533
Query: 662 MRLQSELSCISIPQKHPERRKSSSPISL 689
+ L+ E+SC+ + E K+SS +++
Sbjct: 534 ITLEHEVSCLDVCSFKNEFYKNSSLVAV 561
>gi|213405251|ref|XP_002173397.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
yFS275]
gi|212001444|gb|EEB07104.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
yFS275]
Length = 1166
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 190/468 (40%), Gaps = 108/468 (23%)
Query: 453 KEENGRLVYT-SPIQNIA---------PILDMSVVDYHDEKRDQMFACCGVAPEGSLRII 502
K +L Y P+QNI+ P+ D V + Q++ CG E SLR++
Sbjct: 390 KHSPKKLTYKLHPLQNISLLDEIPSLFPLTDAIVTRTSTDANSQLYTLCGRHKEASLRLL 449
Query: 503 RSGISLEKLLRT----APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTD 558
+ G+S +++ + API WTV+ K++DPY ++VLSF T VL +G +
Sbjct: 450 KRGVSATEVVLSELPGAPI-----AIWTVKQKLNDPYDKYMVLSFTNGTLVLSIGETVEE 504
Query: 559 VTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPE 617
V DS G V TL + +VQIH +R C+ + T W P
Sbjct: 505 VLDS-GLLSSVSTLNVRQLGRSSVVQIHSKGIR-CIS-----------ANKEVTEWKTPA 551
Query: 618 HVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKH 677
I+ A+ I+VS SN E+ + + E ++ ++
Sbjct: 552 DTVITNSAINEQQIVVSLSND-------------------ELAYFEMDDEYGQLN---EY 589
Query: 678 PERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIV 737
ER+ +SP++ + ++ +P G + + +V ++S P L L+ ++
Sbjct: 590 QERKLLTSPVTAL---ALGPVPQGSKRSNFLCLASEDSTVRIVSLDPYTTLENLSVQAL- 645
Query: 738 LTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
A S C+ ++ + + Y+ GL NG+ L
Sbjct: 646 ----SAPASSLCMV-NMEVTGYETLYLHIGLSNGVYL----------------------- 677
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRR--IGITPVFLVPLSDSLDADMIALS 855
R ++ SG QLI TR +G P+ L P+ ++A++
Sbjct: 678 --RTVVDVTSG-----------------QLIDTRTRFLGPRPIRLSPIIVRGKQSVLAIA 718
Query: 856 DRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+R +L + +L + + + P +A S +CP+GI+ + +N L +
Sbjct: 719 NRSYLSYSNEQTLQVSPLLYSPLEYADSFASHQCPEGIVGIHQNILKI 766
>gi|414882040|tpg|DAA59171.1| TPA: hypothetical protein ZEAMMB73_269016 [Zea mays]
Length = 690
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 191/453 (42%), Gaps = 94/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ I+++ P++DM V + DE+ Q+F CG P +LRI+R G+++ ++ R+
Sbjct: 256 LMRIDEIESLMPVMDMRVANLFDEETPQLFTACGRGPRSTLRILRPGLAISEMARSMLPA 315
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ I WTV+ ++D + +++V+SF T VL +G +V+DS F +LA L+
Sbjct: 316 EPI-AVWTVKKNINDMFDAYIVVSFTNVTLVLSIGETIEEVSDS-QFLDTTHSLAVTLLG 373
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSIS-LGAVAHNMIIVSTS 636
+ L+Q+H N +R + G + W P +I+ +G+ ++I +
Sbjct: 374 EDSLMQVHPNGIR-----HIREDGRV-------NEWRTPGKKTITKVGSNRLQVVIALSG 421
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
F + + ++ E++ + +++C++I +P+
Sbjct: 422 GELIYFEMDMTG------QLMEVEKQDMSGDVACLAI-----------APV--------- 455
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGCI 750
P G V+G++ ++ +LS P + L+ L+ S+ +L + ++ G
Sbjct: 456 --PEGRQRSRFLVVGSYDNTIGILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGED 513
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
D ++ AGL+NG+L R N + + ++
Sbjct: 514 GAD----YPANLFLNAGLQNGVLFR------------------------TNVDMVTGQLS 545
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
T S R +G+ P L P S + LS RPWL +
Sbjct: 546 DTRS----------------RFLGLRPPKLFPCIVSHRQAKLCLSSRPWLGYIHQGHFLL 589
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S A+ S +C +G++ VA ++L +
Sbjct: 590 TPLSCDTLESASSFSSDQCSEGVVAVAGDALRI 622
>gi|225448823|ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
Length = 1214
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 192/454 (42%), Gaps = 96/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++ PI+DM V + +E+ Q+FA CG P S+RI+R G+++ ++
Sbjct: 393 LVRIDQVESLMPIMDMKVSNLFEEETPQIFALCGRGPRSSIRILRPGLAISEM--AVSQL 450
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WTV+ V+D + +++V+SF T VL +G +V+DS GF +LA L+
Sbjct: 451 PGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP--EHVSISLGAVAHNMIIVST 635
D L+Q+H + +R + G I W + + +G+ ++I +
Sbjct: 510 GDDSLMQVHPSGIR-----HIREDGRI-------NEWRTPGKRTIVKVGSNRLQVVIALS 557
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
F + + ++ E++ + +++C+ I PE R+ S ++
Sbjct: 558 GGELIYFEVDMTG------QLMEVEKHEMSGDVACLDIAPV-PEGRQRSRFLA------- 603
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGC 749
+G++ ++ +LS P + +++L+ S+ +L + ++ G
Sbjct: 604 --------------VGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGE 649
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
D L ++ AGL+NG+L R + ++ + + G+
Sbjct: 650 DGADHPASL----FLNAGLQNGVLFR--------------TVVDMVTGQLSDARSRFLGL 691
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
A F ++ RR M+ LS RPWL +
Sbjct: 692 RAPKLFSV---------IVRGRRA-----------------MLCLSSRPWLGYIHQGHFL 725
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A S +C +G++ VA ++L +
Sbjct: 726 LTPLSYETLEFAASFSSDQCAEGVVAVAGDALRV 759
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 32 YLAKCVLKGSVVLQVA-HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
YL L+ + + A +G+ S ++V + ++L+ E+G +Q++ +FG I
Sbjct: 2 YLYSLTLQQATGIVCAINGNFSGGKSQEIVVARGKVLDLLRPDENGKIQTILSVEIFGAI 61
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
+ LA +F SQ KD +VV SDSG++ L + E + F + Q G
Sbjct: 62 RSLA------QFRLTGSQ---KDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCR 112
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
R G+ LA+D G + + A E + ++ L+ +
Sbjct: 113 RIVPGQYLAIDPKGRAVMIGACEKQKLVYVLNRDT 147
>gi|110741229|dbj|BAF02165.1| UV-damaged DNA binding factor - like protein [Arabidopsis thaliana]
Length = 727
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 174/424 (41%), Gaps = 92/424 (21%)
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVL 541
+ + Q+ C G +GSLR++R+GI + + + + QGI G W+++ + + + +FLV+
Sbjct: 1 QGQGQVVTCSGAFKDGSLRVVRNGIGINE--QASVELQGIKGMWSLKSSIDEAFDTFLVV 58
Query: 542 SFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
SF+ ETR+L + L + + T+ GF V TL C LVQ+ N+VRL T
Sbjct: 59 SFISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSST---- 114
Query: 601 SGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEM 659
+ + W P ++++ + ++++T ++ L + ++ E+
Sbjct: 115 ------TRELRDEWHAPAGFTVNVATANASQVLLATGGGHLVY------LEIGDGKLTEV 162
Query: 660 QHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEV 719
QH L+ E+SC+ I +PI N + L A +G I S+
Sbjct: 163 QHALLEYEVSCLDI-----------NPIG--DNPNYSQLAA---VGMWTDISVRIFSLPE 206
Query: 720 LSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWP 779
L+ + KE L G I+ + + A G Y+L L +G LL F+
Sbjct: 207 LTLITKEQL----GGEIIPRSVLLCAFEGIS------------YLLCALGDGHLLNFQMD 250
Query: 780 PDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVF 839
T++ + KD ++L G P+
Sbjct: 251 --------------------------------TTTGQLKDRKKVSL--------GTQPIT 270
Query: 840 LVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAEN 899
L S + A SDRP ++ ++ L Y++++ + +H P S P + E
Sbjct: 271 LRTFSSKSATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREG 330
Query: 900 SLNL 903
L +
Sbjct: 331 ELTI 334
>gi|357478269|ref|XP_003609420.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355510475|gb|AES91617.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 1225
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 186/454 (40%), Gaps = 96/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++ P++DM V + +E+ Q+F CG P SLRI+R+G+++ ++
Sbjct: 404 LVRIDQVESLMPVMDMKVSNLFEEETPQIFTLCGRGPRSSLRIMRTGLAVSEM--AVSKL 461
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
GI + WTV+ V D + +++V+SF T VL +G +V+DS GF +LA L+
Sbjct: 462 PGIPSAVWTVKKNVMDEFDAYIVVSFTNATLVLSIGETADEVSDS-GFLDTAPSLAVSLI 520
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP--EHVSISLGAVAHNMIIVST 635
D L+Q+H N +R + G W + +G+ ++I
Sbjct: 521 GDDSLMQVHPNGIR-----HIREDG-------RTNEWQTSGKRTIAKVGSNRLQVVIALN 568
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
F + V ++ E++ + +++C+ I +P+
Sbjct: 569 GGELIYFEVDVTG------QLMEVERHEMSGDVACLDI-----------APV-------- 603
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGC 749
P G + +G++ ++ +LS P + ++ L S+ +L + ++ G
Sbjct: 604 ---PKGRLRSRFLAVGSYDKTIRILSLDPDDCMQTLGIQSLSSAPESLLFLEVQASVGGE 660
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
D L ++ AGL+NG+L R + V + +S T
Sbjct: 661 DGADHPASL----FLNAGLQNGVLSR----------TVVDMVTGLLSDT----------- 695
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
+R +G+ L P+ M+ LS RPWL +
Sbjct: 696 -------------------RSRFLGLKAPKLFPIIVRGKRAMLCLSSRPWLGYIHQGHFL 736
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ +A S +C +G++ VA +L +
Sbjct: 737 LTPLSYETLEYAASFSSDQCFEGVVSVASEALRI 770
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 56 SNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLL 115
+ ++V + +EL+ + G +QS+ VFGTI+ L+ +F +Q KD +
Sbjct: 30 TQEIVVARGKVLELLRPDKFGRIQSILSVQVFGTIRSLS------QFRLTGAQ---KDFI 80
Query: 116 VVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDR 175
VV SDSG++ L + + + F + Q G R G+ LA+D G + ++A E +
Sbjct: 81 VVGSDSGRIVILDYNKQKNVFDKIHQETFGKSGCRRIVPGQYLAIDPKGRAVMIAACEKK 140
Query: 176 LGLFSLSMSS 185
++ L+ S
Sbjct: 141 KLVYVLNRDS 150
>gi|429329284|gb|AFZ81043.1| CPSF A subunit region domain-containing protein [Babesia equi]
Length = 1175
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 178/449 (39%), Gaps = 107/449 (23%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
+ +++ I DM V D + Q+F CG SLR++R GI++E L ++ +
Sbjct: 401 LSSLSAITDMKVADIQGLGQHQIFLGCGRGSRSSLRVLRYGIAIEG-LASSELPGRPKSV 459
Query: 525 WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
WTVR Y F+++ F T VL VG +VTDS F + TL L+ DG +Q
Sbjct: 460 WTVRSSFESAYDGFIIVGFEGNTLVLSVGEAVEEVTDSC-FLTSITTLHVALMGDGSFIQ 518
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
+H +R V W A + + V+ SN + IL
Sbjct: 519 VHDAGIRHVYDQRVKE-------------W---------RAPSSKRVKVAASNDRQV-IL 555
Query: 645 GVRSLSVSHYEI------YEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
G+ V ++EI E L E+SC+ +
Sbjct: 556 GLSGGDVIYFEIDDSGNLVEYAKKSLSVEISCLDLQPT---------------------- 593
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQ----DV 754
P G I+ IGT SV VL+ + L+V+++ +L+N T S CI + D
Sbjct: 594 PKGRILANFMAIGTLDNSVRVLTL--DKSLKVVSTQ--ILSNN-STPESVCISEFAVGDS 648
Query: 755 RLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSS 814
LV Y+ GL G++LR S+V PI +S
Sbjct: 649 SLV-----YLHVGLNTGVMLR----------STVDPISGALS------------------ 675
Query: 815 FESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSIS 874
++ + + + RR+ + F + +ALSD+PWL+ T R L + I+
Sbjct: 676 --DQESRFLGGRAVKFRRVSLGSSFAI----------VALSDKPWLIYTHRGILLVSPIN 723
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
A + S CP G + V+ N+L +
Sbjct: 724 VGTLESADSLISPICPDGFVAVSGNTLRI 752
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 43 VLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKF 102
+ Q G +P + ++V + +EL+ +G +QS+C VFG ++ ++ F
Sbjct: 15 ITQAVQGSFSAPKAQEIVVARSHILELLSPDSNGKLQSICVCDVFGIVRTMST------F 68
Query: 103 NAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDS 162
+Q +D LVV SDSG+L L FC F + G R G+ LAVD
Sbjct: 69 CLTGTQ---RDYLVVGSDSGRLVVLEFCAVSRSFKRIHCETFGKTGIRRIVPGQYLAVDP 125
Query: 163 SGCLIAVSAYEDRLGLFSLSMSSGSDI 189
G + + A E + ++ L+ + +++
Sbjct: 126 KGRAVIIGAVERQKFVYILNRDAKANL 152
>gi|125977518|ref|XP_001352792.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
gi|54641542|gb|EAL30292.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
Length = 1228
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 181/460 (39%), Gaps = 95/460 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLCCAALG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQ++ + +R S W P SI+ AV ++++ S
Sbjct: 513 DDALVQVYPDGIRHIR------------SDKRVNEWKAPGKKSITKCAVNQRQVVITLSG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ + ++ Y + + +E+ C+++
Sbjct: 561 RELVYFEMDPTGELNEY----TERSEMPAEIMCMAL----------------------GT 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGS-----IVLTNTMGTAIS 747
+P G + +G +V +LS P ++ L S + + + +T T +
Sbjct: 595 VPDGEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTSA 654
Query: 748 GCIPQDVRLVLADQ----FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTE 803
G + D + Y+ GL NG+LLR + P+S +T
Sbjct: 655 GALDDDAPPQRSGSNKGTIYLNIGLSNGVLLR--------------TVLDPVSGDLADTR 700
Query: 804 NIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQT 863
TR +G PV L + ++A+S R WL
Sbjct: 701 --------------------------TRYLGSRPVKLFRIKMQGAEAVLAMSSRSWLSYY 734
Query: 864 ARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 735 HQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 774
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L KG+ V HG+ +++ + S+EL+ + G V ++ +FG
Sbjct: 2 YLYNLTLQKGTGVTHAVHGNFSGGKQQEILLSRGKSLELLRPDSNTGKVHTLLSTEIFGC 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +VV SDSG++ L + + V Q G
Sbjct: 62 IRALMAFRLTGG---------TKDYIVVGSDSGRIVILEYMPAKNALEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDR 175
R G+ A+D G + + A E +
Sbjct: 113 RRIVPGQYFAIDPKGRAVMIGAVEKQ 138
>gi|81868411|sp|Q9ESW0.1|DDB1_RAT RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|9843869|emb|CAB89874.2| damage-specific DNA binding protein 1 [Rattus norvegicus]
Length = 1140
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 177/452 (39%), Gaps = 94/452 (20%)
Query: 454 EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLR 513
E+ +V N+ PI+DM VVD + + Q+ C G EGSLRIIR+GI + +
Sbjct: 342 EQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHE--H 399
Query: 514 TAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
+ GI G W +R + LVLSFV +TRVL + + T+ +GF D T
Sbjct: 400 ASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFF 459
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMII 632
CG VA L+QI +VRL A + + W P +IS+ + + ++
Sbjct: 460 CGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPRAKNISVASCNSSQVV 509
Query: 633 VSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSN 692
V+ + L + E+ ++ H ++ E++C+ + +P+ SN
Sbjct: 510 VAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDV-----------TPLG-DSN 550
Query: 693 SSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQ 752
P G+ + I PS E+L + + G I IP+
Sbjct: 551 GLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-------------IPR 589
Query: 753 DVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAA 811
+ + Y+L L +G L F NI +G+ +
Sbjct: 590 SILMTTFESSHYLLCALGDGALFYFGL-------------------------NIETGLLS 624
Query: 812 TSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYT 871
D + L G P L ++ A SDRP ++ ++ H L ++
Sbjct: 625 -------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFS 669
Query: 872 SISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+++ + + P+ S P + ++L +
Sbjct: 670 NVNLKEVNYMCPLNSDGYPDSLALANTSTLTI 701
>gi|402222132|gb|EJU02199.1| hypothetical protein DACRYDRAFT_21931 [Dacryopinax sp. DJM-731 SS1]
Length = 1209
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 178/454 (39%), Gaps = 99/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + PI+D V + + Q+FA CG S R++R G+ +E+ + +
Sbjct: 406 LVLADELNSFDPIVDAKVTNLLNTDTPQIFAACGRGARSSFRMLRHGLDVEETVSSE--L 463
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
GI WTV++K D Y ++++LSFV T VL +G +V+D+ GF T+A +
Sbjct: 464 PGIPNAVWTVKLKADDQYDAYIILSFVNGTLVLSIGETIEEVSDT-GFLSSSPTIAVQQI 522
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTS 636
+ L+Q++ + +R LS W P+H +I + ++ S
Sbjct: 523 GEDSLLQVYPHGIRHV------------LSDRRVNEWRCPQHTTIVAATTNSRQVAIALS 570
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
+ ++ + L+ +L+ E + S S V S+
Sbjct: 571 SAQLVYF-----------------ELDLEGQLN---------EYQDRKSLGSGVLAMSIA 604
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGC 749
+P G +G +V ++S P L ++ SI + M +I
Sbjct: 605 EVPEGRQRTPYLAVGCEDQTVRIISLDPDTTLENISLQALTAPPSSICVAEIMDASIDKN 664
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
P +V GL+NG+LLR + P++ +T
Sbjct: 665 QP---------TMFVNIGLQNGVLLR--------------TVLDPVNGQLTDTR------ 695
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
TR +G PV L+ ++ ++ALS R WL T ++ L
Sbjct: 696 --------------------TRFLGSRPVRLIRVNVHGLPSILALSSRSWLNYTYQNLLH 735
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + F P +A + CP G++ ++ N L +
Sbjct: 736 FTPLIFDPLEYAWSFSAELCPDGLIGISGNVLRI 769
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 41 SVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWN 99
+ + Q G+ + +++ + T +EL+ + G V +V VFGTI+ L
Sbjct: 12 TAITQAIVGNFSGVRAQEIIVSRGTRLELLKPDPNTGKVSTVLTHDVFGTIRSLVAFRLT 71
Query: 100 KKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLA 159
KD +V SDSG+L L + + + F + Q G R G+ LA
Sbjct: 72 GG---------AKDYAIVGSDSGRLVILEYDPQANAFTKLHQETYGKSGVRRIVPGQYLA 122
Query: 160 VDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
VD G + ++A E ++ L+ + +++
Sbjct: 123 VDPKGRSVMIAALEKAKLVYILNRDAAANL 152
>gi|198420618|ref|XP_002125906.1| PREDICTED: similar to Splicing factor 3B subunit 3
(Spliceosome-associated protein 130) (SAP 130)
(Pre-mRNA-splicing factor SF3b 130 kDa subunit)
(SF3b130) (STAF130) [Ciona intestinalis]
Length = 1216
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 198/479 (41%), Gaps = 97/479 (20%)
Query: 436 EGRFLSAF-VEMGDGMVLKEENGR-LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
E F SA +E GD R LV + +++PI+ + D +E Q++ CG
Sbjct: 370 ETEFSSAMPLEEGDTFFYAPRALRNLVLVDELDSLSPIMTCLISDLANEDTPQLYVTCGR 429
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
P SLR++R G+ + ++ + + WTV++K + + S++++SFV T VL +G
Sbjct: 430 GPRSSLRVLRHGLEVSEMA-VSELPGNPNAVWTVKIKEEEEFDSYIIVSFVNATLVLSIG 488
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
+VTDS GF TL+C L+ + LVQ++ + +R I V
Sbjct: 489 ETVEEVTDS-GFLGTTPTLSCSLLGENALVQVYPDGIR-----------HIRADKRVNEW 536
Query: 614 WFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
P +I AV ++++ + ++ +S ++ Y + + SE+ C+ +
Sbjct: 537 KTPGKKTILRCAVNQRQVVIALTGGELVYFEMDQSGQLNEY----TERKEMNSEVVCMDL 592
Query: 674 PQKHP-ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA 732
+ P E+R + L N +V ++S P + L+ L+
Sbjct: 593 SKVPPTEQRTRFLAVGLADN-----------------------TVRIISLDPTDCLQPLS 629
Query: 733 SGSI--------VLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNI 784
++ ++ G +G LVL GL+NG+LLR
Sbjct: 630 MQALPATPESVCIIEIGGGEDETGAQKASGGLVLN------IGLQNGVLLR--------- 674
Query: 785 PSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLS 844
+N+ ++ T + + + TR + + V L+
Sbjct: 675 ---------------TTLDNVTGDLSDTRT-----------RYLGTRAVKLFRV----LT 704
Query: 845 DSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
DA ++A+S R WL ++ T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 705 QGSDA-VLAMSSRTWLSYQHQNRFHLTPLSYESLEFASGFASEQCPEGIVAISANTLRI 762
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVP 97
+ + ++ HG+ ++ + +EL+ + G V ++ VFG I+ L
Sbjct: 10 RATTIIHAVHGNFSGTKQQEIAVSRGKLLELLKPDPNTGKVHTLITVEVFGEIRSLMSF- 68
Query: 98 WNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS---RHQL 154
+ N KD +V SDSG++S L + ++F ++HL G S R
Sbjct: 69 ---RLTGGN-----KDYVVCGSDSGRISILEYIPNKNKF---EKIHLETFGKSGCRRIVP 117
Query: 155 GRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
G+ LA+D G + + A E + ++ L+ S
Sbjct: 118 GQYLAIDPKGRAVMIGALEKQKLVYILNRDS 148
>gi|195169735|ref|XP_002025674.1| GL20829 [Drosophila persimilis]
gi|194109167|gb|EDW31210.1| GL20829 [Drosophila persimilis]
Length = 1225
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 181/460 (39%), Gaps = 95/460 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLCCAALG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQ++ + +R S W P SI+ AV ++++ S
Sbjct: 513 DDALVQVYPDGIRHIR------------SDKRVNEWKAPGKKSITKCAVNQRQVVITLSG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ + ++ Y + + +E+ C+++
Sbjct: 561 RELVYFEMDPTGELNEY----TERSEMPAEIMCMAL----------------------GT 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGS-----IVLTNTMGTAIS 747
+P G + +G +V +LS P ++ L S + + + +T T +
Sbjct: 595 VPDGEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTSA 654
Query: 748 GCIPQDVRLVLADQ----FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTE 803
G + D + Y+ GL NG+LLR + P+S +T
Sbjct: 655 GALDDDAPPQRSGSNKGTIYLNIGLSNGVLLR--------------TVLDPVSGDLADTR 700
Query: 804 NIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQT 863
TR +G PV L + ++A+S R WL
Sbjct: 701 --------------------------TRYLGSRPVKLFRIKMQGAEAVLAMSSRSWLSYY 734
Query: 864 ARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 735 HQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 774
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L KG+ V HG+ +++ + S+EL+ + G V ++ +FG
Sbjct: 2 YLYNLTLQKGTGVTHAVHGNFSGGKQQEILLSRGKSLELLRPDSNTGKVHTLLSTEIFGC 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +VV SDSG++ L + + V Q G
Sbjct: 62 IRALMAFRLTGG---------TKDYIVVGSDSGRIVILEYMPAKNALEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDR 175
R G+ A+D G + + A E +
Sbjct: 113 RRIVPGQYFAIDPKGRAVMIGAVEKQ 138
>gi|195996829|ref|XP_002108283.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
gi|190589059|gb|EDV29081.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
Length = 1208
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 183/452 (40%), Gaps = 91/452 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + ++ PI V D +E Q++ CG P +LRI+R G+ + ++ + +
Sbjct: 395 LVEVDEVDSLCPITGCQVADLANEDTPQLYVSCGRGPNSTLRILRHGLEVTEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
G WTV+ S Y +++V+SFV T VL +G + +V+DS GF TL C +
Sbjct: 454 GNPNGVWTVKTSASAEYDAYIVVSFVNATLVLSIGESVEEVSDS-GFLGTTPTLHCCQIG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D L+Q++ N +R + W P IS AV + + ++ +
Sbjct: 513 DDALLQVYANGIRHVRADKRVN------------EWKAPGKKIISKCAVNNRQVAIALTG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ M L +L+ ++ ERR+ SS + +S SV
Sbjct: 561 GELVYF-----------------EMDLSGQLN------EYTERREFSSEVICMSIGSV-- 595
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGCIP 751
P G +G +V ++S P + L+ ++ ++ + MG+ S
Sbjct: 596 -PVGEKRCRFLAVGLADHTVRMISLDPSDCLQPMSMQALPTVPESLCIVAMGSGDSSESE 654
Query: 752 QDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAA 811
Q V +Y+ GL+NG+LLR S + + +S T
Sbjct: 655 QGV----LSTYYLNIGLQNGVLLR----------SVLDSVTGDMSDT------------- 687
Query: 812 TSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYT 871
TR +G PV L + ++A+S R WL + T
Sbjct: 688 -----------------RTRYLGSRPVRLFKVKIQNSEAVLAISSRSWLGYMFQSVSRLT 730
Query: 872 SISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+S+ +A+ S +CP+G++ +A ++L +
Sbjct: 731 PLSYDALDYASGFSSDQCPEGVVSIAGDTLRI 762
Score = 46.2 bits (108), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 11/158 (6%)
Query: 32 YLAKCVLKGSVVLQVA-HGHLRSPTSNDVVFGKETSIELVI-IGEDGIVQSVCEQAVFGT 89
YL L+ S + A HG+ +++ K +EL+ G V S+ VFG
Sbjct: 2 YLYSLTLQKSSCITCAVHGNFSGTKQQEIIAAKGKVLELLRPDANSGKVHSITTLEVFGE 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ LA P+ + KD +V+ SDSG+++ L + + F + Q G
Sbjct: 62 IRCLA--PFRLTGGS-------KDYVVIGSDSGRITILEYIPSKNTFEKIHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGS 187
R G+ LAVD G + + A E + ++ L+ + +
Sbjct: 113 RRIVPGQYLAVDPKGRAVMIGAMEKQKLVYILNRDTSA 150
>gi|449459948|ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
gi|449513493|ref|XP_004164340.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
Length = 1214
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 196/451 (43%), Gaps = 90/451 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ ++++ PI+DM +++ +E+ Q+F CG P SLRI+R G+++ ++ +
Sbjct: 393 LMRIDQVESLMPIMDMKIINLFEEETPQIFTLCGRGPRSSLRILRPGLAISEMAVSE--L 450
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WTV+ ++D + +++V+SF T VL +G +V+DS GF +LA L+
Sbjct: 451 PGVPSAVWTVKKNINDEFDAYIVVSFANATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 509
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP--EHVSISLGAVAHNMIIVST 635
D L+Q+H N +R + G I W + + +G+ ++I +
Sbjct: 510 GDDSLMQVHPNGIR-----HIREDGRI-------NEWRTPGKRTIVKVGSNRLQVVIALS 557
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
F + + ++ E++ + +++C+ I PE R+ S ++
Sbjct: 558 GGELIYFEVDMTG------QLMEVEKHEMSGDVACLDIAPV-PEGRQRSRFLA------- 603
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVR 755
+G++ ++ +LS P + +++L+ S+ P+ +
Sbjct: 604 --------------VGSYDNTIRILSLDPDDCMQILSVQSV-----------SAAPESLL 638
Query: 756 LVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSV---APIHSPISATFRNTENIRSGIAAT 812
+ + G +G ++ P+S+ A +HS + FR ++ +G +
Sbjct: 639 FL---EVLASVGGEDG----------ADHPASLFLNAALHSGV--LFRTVVDMVTGQLSD 683
Query: 813 SSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTS 872
S +R +G+ L + ++ LS RPWL + T
Sbjct: 684 SR---------------SRFLGLRAPKLFSVVLRGRRAILCLSSRPWLGYIHQGHFLLTP 728
Query: 873 ISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+S++ +A+ S +C +G++ VA N L +
Sbjct: 729 LSYETLEYASSFSSDQCAEGVVAVAGNFLRV 759
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
YL L + + ++ +G+ + ++V + ++L+ + G +Q++ +FG I
Sbjct: 2 YLYSLTLQRATGIVSAINGNFSGGKTQEIVVARGKVLDLIRPDDSGKIQTLLSVEIFGAI 61
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
+ LA +F SQ KD +VV SDSG++ L + + + F + Q G
Sbjct: 62 RSLA------QFRLTGSQ---KDYIVVGSDSGRIVILEYNKDKNVFDKIHQETFGKSGCR 112
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGS 187
R G+ LA+D G + + A E + ++ L+ + +
Sbjct: 113 RIVPGQYLAIDPKGRAVMIGACEKQKLVYVLNRDTAA 149
>gi|441604084|ref|XP_004087862.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
[Nomascus leucogenys]
Length = 1140
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 182/466 (39%), Gaps = 100/466 (21%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ + N+ P +DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVAAMETFTNLGPXVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ +GF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQA 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
+IS+ + + ++V+ + L + E+ ++ H ++ E++C+ I
Sbjct: 496 KNISVASCNSSQVVVAVGRALYY-------LQIHPQELRQISHTEMEHEVACLDI----- 543
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
+P+ SN P G+ + I PS E+L + + G I
Sbjct: 544 ------TPLG-DSNGLSPLCAIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-- 586
Query: 739 TNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + + Y+L L +G L F
Sbjct: 587 -----------IPRSILMTTFESSHYLLCALGDGALFYFGL------------------- 616
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
NI +G+ + D + L G P L ++ A SDR
Sbjct: 617 ------NIETGLLS-------DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDR 655
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + ++L +
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTI 701
>gi|194864680|ref|XP_001971056.1| GG14635 [Drosophila erecta]
gi|190652839|gb|EDV50082.1| GG14635 [Drosophila erecta]
Length = 1227
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 177/459 (38%), Gaps = 94/459 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLCCAALG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQ++ + +R S W P SI+ AV ++++ S
Sbjct: 513 DDALVQVYPDGIRHIR------------SDKRVNEWKAPGKKSITKCAVNQRQVVITLSG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ S ++ Y + + +E+ C+++
Sbjct: 561 RELVYFEMDPSGELNEY----TERSEMPAEIMCMAL----------------------GT 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGSIVL--------TNTMGT 744
+P G + +G +V +LS P ++ L S + L +T
Sbjct: 595 VPDGEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQG 654
Query: 745 AISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTEN 804
A+ P Y+ GL NG+LLR + P+S +T
Sbjct: 655 ALDDDAPAQRSGSNKGTIYLNIGLSNGVLLR--------------TVLDPVSGDLADTR- 699
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA 864
TR +G PV L + ++A+S R WL
Sbjct: 700 -------------------------TRYLGSRPVKLFRIKMQGAEAVLAMSSRTWLSYYH 734
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 735 QNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 773
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L KG+ V HG+ +V+ + S+EL+ + G V ++ +FG
Sbjct: 2 YLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFGC 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +VV SDSG++ L + + V Q G
Sbjct: 62 IRALMAFRLTGG---------TKDYIVVGSDSGRIVILEYNASKNALEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDR 175
R G+ A+D G + + A E +
Sbjct: 113 RRIVPGQYFAIDPKGRAVMIGAVEKQ 138
>gi|384250802|gb|EIE24281.1| hypothetical protein COCSUDRAFT_28729 [Coccomyxa subellipsoidea
C-169]
Length = 1101
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISL-EKLLRTAPIYQGITG 523
+ N+ PI+D VVD + + Q+ C G+ +GSLRI+R+GI + E+ P GI G
Sbjct: 354 MTNLGPIIDFVVVDLERQGQGQVVMCSGIMADGSLRIVRNGIGMIEQATVELP---GIKG 410
Query: 524 TWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSV---GFRPDVCTLACGLVADG 580
W +R D + +FLV+SFV ETR+L +N D D GF D TL CG
Sbjct: 411 MWALRASHMDAFDTFLVISFVGETRIL--AINADDELDEAELPGFSADAQTLCCGNTVSD 468
Query: 581 LLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPC 639
LVQ+ VRL + + + W P ++I++ +V+ ST++
Sbjct: 469 HLVQVAGADVRLVDAS----------TRQLTHQWRPPAGLNINVASVSPTQASPSTAHGN 518
Query: 640 FLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
++ L + I + H++L +E++C+ I
Sbjct: 519 LVY------LELGESGIEQKGHVKLDAEVACVDI 546
>gi|427798971|gb|JAA64937.1| Putative damage-specific dna binding complex subunit ddb1, partial
[Rhipicephalus pulchellus]
Length = 1259
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 113/521 (21%), Positives = 202/521 (38%), Gaps = 98/521 (18%)
Query: 389 DKIPKMV-FCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGR---FLSAF- 443
D IP CV F + FG+ CLY+ A L E F SA
Sbjct: 331 DTIPVAASMCVLKTGFLFVAAEFGN--------HCLYQ----IARLGEEDEEPEFSSAIP 378
Query: 444 VEMGDGMVLKEENGR-LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRII 502
+E GD R L+ + +++P + ++ D +E Q++ CG P +R++
Sbjct: 379 LEEGDTFFFAPRALRNLLPVEELDSLSPAMGCTIADLANEDTPQLYVACGRGPRSCIRVL 438
Query: 503 RSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDS 562
R G+ + ++ + + WTV+ K + Y +++++SFV T VL +G +VTDS
Sbjct: 439 RHGLEVSEMA-VSELPGNPNAVWTVKRKADEDYDAYIIVSFVNATLVLSIGETVEEVTDS 497
Query: 563 VGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSIS 622
GF TL+C + D LVQ++ +R I V P +I
Sbjct: 498 -GFLGTTPTLSCAQIGDDALVQVYPEGIR-----------HIRADKRVNEWRTPGKKAIV 545
Query: 623 LGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRK 682
AV ++++ + ++ E+ ++ +RR+
Sbjct: 546 KCAVNQRQVVIALTGGELVYF-----------------------EMDPTGQLNEYTDRRE 582
Query: 683 SSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTM 742
S+ I +S +SV P G +G +V ++S P + L L+ ++ T
Sbjct: 583 MSADIICMSLASV---PTGEQRSRFLAVGLADNTVRIISLDPSDCLSPLSMQALPATPES 639
Query: 743 GTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNT 802
+ + + + V Y+ GL+NG+LLR
Sbjct: 640 LSIVEMGMTE-VETTGQGILYLNIGLQNGVLLR--------------------------- 671
Query: 803 ENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQ 862
D++ +L TR +G PV L + +A+S R WL
Sbjct: 672 -------------TVLDQVTGDLSDTRTRYLGSRPVKLFKVRMQGSDAALAMSSRSWLSY 718
Query: 863 TARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 719 YYQNRFHLTPLSYETLEFASGFSSEQCPEGIVAISTNTLRI 759
>gi|357147370|ref|XP_003574320.1| PREDICTED: splicing factor 3B subunit 3-like [Brachypodium
distachyon]
Length = 1228
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 192/453 (42%), Gaps = 94/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I+++ PI+DM + + DE+ Q++ CG ++RI+R G+++ ++ R+
Sbjct: 404 LVRIDEIESLMPIMDMRIANLFDEETPQVYTACGRGSRSTMRILRPGLAISEMARSMLPA 463
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ I WTV+ ++D + +++V+SF T VL +G +V+DS F +LA L+
Sbjct: 464 EPIA-VWTVKKNINDMFDAYIVVSFANVTLVLSIGETIEEVSDSQ-FLDTTHSLAVSLLG 521
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSIS-LGAVAHNMIIVSTS 636
+ L+Q+H N +R + G + W P +I+ +G+ ++I +
Sbjct: 522 EDSLMQVHPNGIR-----HIREDGRV-------NEWRTPGKKTITKVGSNRLQVVIALSG 569
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
F + + ++ E++ + +++C++I PE R+ S ++
Sbjct: 570 GELIYFEMDMTG------QLMEVEKQDMSGDVACLAIAPV-PEGRQRSRFLA-------- 614
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGCI 750
+G++ ++ +LS P + L+ L+ S+ +L + ++ G
Sbjct: 615 -------------VGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGED 661
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
D L ++ AGL+NG+L R N + + ++
Sbjct: 662 GADYPANL----FLNAGLQNGVLFR------------------------TNVDMVTGQLS 693
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
T S R +G+ P L P S M+ LS RPWL +
Sbjct: 694 DTRS----------------RFLGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLL 737
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S A S +C +G++ VA ++L +
Sbjct: 738 TPLSCDTLESAASFSSDQCSEGVVAVAGDALRI 770
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 74 EDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEM 133
E G ++++ VFG I+ LA +F + KD LVV SDSG+L L + +
Sbjct: 56 ETGRLRTLLSVDVFGAIRSLA------QFRLTGAT---KDYLVVGSDSGRLVILEYSPDR 106
Query: 134 HRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGS 187
+RF V Q G R G++L VD G + ++A E + ++ L+ + +
Sbjct: 107 NRFDKVHQETFGKSGCRRIVPGQLLTVDPKGRALCIAALEKQKLVYVLNRDASA 160
>gi|255588145|ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223525135|gb|EEF27867.1| spliceosomal protein sap, putative [Ricinus communis]
Length = 1214
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 190/450 (42%), Gaps = 88/450 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++ PI+DM + + DE+ Q+F+ CG P SLRI+R G+++ ++ +
Sbjct: 394 LVRIDQVESLMPIMDMKIANLFDEETPQIFSLCGRGPRSSLRILRPGLAISEMAVSQ--L 451
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WTV+ V+D + +++++SF T VL +G +V +S GF +LA L+
Sbjct: 452 PGVPSAVWTVKKNVNDEFDAYIIVSFNNATLVLSIGETVEEVNNS-GFLDTTPSLAVSLI 510
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP--EHVSISLGAVAHNMIIVST 635
D L+Q+H N +R + G I W + + +G+ ++I +
Sbjct: 511 GDDSLMQVHPNGIR-----HIREDGRI-------NEWRTPGKRTIVKVGSNRVQVVIALS 558
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
F + + ++ E++ + +++C+ I PE R+ S ++
Sbjct: 559 GGELIYFEVDITG------QLMEVEKHEMSGDVACLDIAPV-PEGRQRSRFLA------- 604
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL--TNTMGTAISGCIPQD 753
+G+ ++ +LS P + +++L+ S+ + + + + ++
Sbjct: 605 --------------VGSFDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGRE 650
Query: 754 VRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATS 813
++ AGL++G+L R + ++ ++ + G+ A
Sbjct: 651 DVADHPASLFLNAGLQSGVLFR--------------TLVDMVTGQLSDSRSRFLGLRAPK 696
Query: 814 SFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSI 873
F L+ RR M+ LS RPWL + T +
Sbjct: 697 LFSI---------LVRGRRA-----------------MLCLSSRPWLGYIHQGHFLLTPL 730
Query: 874 SFQPSTHATPVCSVECPKGILFVAENSLNL 903
S++ A S +C +G++ VA ++L +
Sbjct: 731 SYETLEFAASFSSDQCAEGVVAVAGDALRI 760
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L + + ++ +G+ + ++V + ++L+ E+ G +Q++ +FG
Sbjct: 2 YLYNLTLQRATGIITAINGNFSGGKTQEIVVARGKVLDLLRPDENSGKLQTILSVEIFGA 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ LA +F SQ KD +VV SDSG++ L + E + F + Q G
Sbjct: 62 IRSLA------QFRLTGSQ---KDYIVVGSDSGRIVILEYNKERNVFDKIHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGS 187
R G+ LA+D G + + A E + ++ L+ + +
Sbjct: 113 RRIVPGQYLAIDPKGRAVMIGACEKQKLVYVLNRDTAA 150
>gi|308805058|ref|XP_003079841.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
gi|116058298|emb|CAL53487.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
Length = 1166
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 119/547 (21%), Positives = 205/547 (37%), Gaps = 140/547 (25%)
Query: 401 GEFFMIEIAFGSDGHKVHLSECLYKG--PPCKALLWVEGRFLSAFVEMGD---------- 448
G+ + + I + D KV + Y PPC ++ ++ FL A E G+
Sbjct: 305 GDIYKLSIEYSGD--KVSEVKVKYFDTIPPCVSMCVLKTGFLFAASEFGNHALYQFAGIG 362
Query: 449 ---------GMVLKEENG---------RLVYTSPIQNI---APILDMSVVDYHDEKRDQM 487
+++ E G RL PI I PILDM + +E Q+
Sbjct: 363 DDDAVESSSASLMETEQGYEPVFFDPRRLTNLYPIDKIDSLCPILDMQAHNLTEEDTPQL 422
Query: 488 FACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEET 547
+ CG SLRI+R GI + +L ++ Q +TV+ K SD Y ++V+SF+ T
Sbjct: 423 YTLCGTGARSSLRILRQGIGMNELAMSSLPGQ-PNAIFTVKKKSSDQYDGYIVVSFLNAT 481
Query: 548 RVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIP-- 605
VL +G T+V+DS G TL L+ D L+Q+H +R + P
Sbjct: 482 LVLAIGDTVTEVSDS-GILGTTMTLQVCLMNDDSLLQVHAGGLRHIKADKRINEWRTPGR 540
Query: 606 --LSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMR 663
+S C S ++I T F L S ++ E++ +
Sbjct: 541 KQISKCTCNS--------------KQVVIALTGGEVIYFELD------SAGQLIEVEKLE 580
Query: 664 LQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFV 723
+++C+ I +P+ P G + +G++ +V V+S
Sbjct: 581 TNGDIACVDI-----------APV-----------PEGALRSRFLAMGSYDGTVRVMSLN 618
Query: 724 PKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLV-------LADQFYVLAGLRNGMLLRF 776
+ L+ LA A+ G P + ++ L + G+ NG+L+R
Sbjct: 619 SDDCLQTLAV----------QALKGSTPSSLLILQTAGTESLQGSLLLNVGMANGVLMR- 667
Query: 777 EWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGIT 836
AT D++ L + R +G
Sbjct: 668 --------------------ATL-------------------DQVSGQLSDMRVRFLGTR 688
Query: 837 PVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFV 896
LV S ++ ++ALS RPWL + + + + IS+ S CP+G++ +
Sbjct: 689 APKLVRTSVRGESALVALSSRPWLGYSEKGTFVLSPISYVALEEVCSFSSEACPEGVVAI 748
Query: 897 AENSLNL 903
+ +L +
Sbjct: 749 SNQTLRI 755
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Query: 30 IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGT 89
+H + K + A+G+ + + ++V + IEL+ + G VQ+V FG
Sbjct: 2 VHLYNLTLQKSGGITAAAYGNFSAAKAQEIVVVRNKVIELLRPDDSGRVQTVSSMEAFGV 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
++ + + + N +D L V SDSG++ L F E + F V Q G
Sbjct: 62 VRSICAL----RLAGAN-----RDYLCVGSDSGRVVILQFKKERNAFVKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYE 173
R G+ + D G I + A E
Sbjct: 113 RRVVPGQFVCADPKGRAICLGAME 136
>gi|229577321|ref|NP_001153352.1| splicing factor 3b, subunit 3 [Nasonia vitripennis]
Length = 1216
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 188/473 (39%), Gaps = 84/473 (17%)
Query: 436 EGRFLSAF-VEMGDGMVLKEENGR-LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
E F SA +E GD R LV + +++PI+ V D +E Q++ CG
Sbjct: 370 EPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDTPQLYIACGR 429
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
P +LR++R G+ + ++ + + WTV+ ++ + + +++++SFV T VL +G
Sbjct: 430 GPRSTLRVLRHGLEVSEMA-VSELPGNPNAVWTVKRRIDEEFDAYIIVSFVNATLVLSIG 488
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
+VTDS GF TL+C + + LVQ++ + +R I V
Sbjct: 489 ETVEEVTDS-GFLGTTPTLSCSALGEDALVQVYPDGIR-----------HIRADKRVNEW 536
Query: 614 WFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
P +I AV ++++ + ++ E+
Sbjct: 537 KAPGKKTIIKCAVNQRQVVIALTGGELVYF-----------------------EMDPTGQ 573
Query: 674 PQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLAS 733
++ ER+K S + ++ +V AG + +G +V ++S P + L +
Sbjct: 574 LNEYTERKKMPSEVMCMALGNV---AAGEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSM 630
Query: 734 GSIVLTNTMGTAISGCIPQDVRL---VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAP 790
++ + I D + ++ GL+NG+LLR
Sbjct: 631 QALPAAAESLCIVEMGIKDDTSEDSNQMQSTLHLNIGLQNGVLLR--------------T 676
Query: 791 IHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDAD 850
+ PIS +T TR +G PV L + +
Sbjct: 677 VLDPISGDLSDTR--------------------------TRYLGSRPVKLFRIRMQGNQA 710
Query: 851 MIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++A+S R WL ++ T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 711 VLAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRI 763
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L + + + HG+ +++ + S+EL+ + G V ++ VFG
Sbjct: 2 YLYNLTLQRATGITHAVHGNFSGTKMQEILVSRGKSLELLRPDPNTGKVHTMLTVEVFGI 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +VV SDSG++ L + + F V Q G
Sbjct: 62 IRSLMAFRLTGG---------TKDYIVVGSDSGRIVILEYVPAKNVFEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLS 182
R G+ LA+D G + + A E + ++ L+
Sbjct: 113 RRIVPGQYLAIDPKGRAVMIGAIEKQKLVYILN 145
>gi|159489018|ref|XP_001702494.1| UV-damaged DNA binding complex subunit 1 protein [Chlamydomonas
reinhardtii]
gi|158280516|gb|EDP06273.1| UV-damaged DNA binding complex subunit 1 protein [Chlamydomonas
reinhardtii]
Length = 1147
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 22/212 (10%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI-YQGITGTW 525
N+ PILD V+D + + Q+ C GV +GSLR+IR+GI + R A + GI G W
Sbjct: 392 NLGPILDFVVMDLERQGQGQLVTCSGVDGDGSLRVIRNGIGIN---RQATVELAGIKGVW 448
Query: 526 TVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSV---GFRPDVCTLACGLVADGLL 582
++R D + ++LVL+FV ETR+L LN + D GF TL CG A L
Sbjct: 449 SLRAHYGDEHDAYLVLTFVGETRLL--ALNAEEELDEAEIPGFDAAAQTLWCGNTACDHL 506
Query: 583 VQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFL 641
+Q+ ++VRL + +A + + W P SI++ A + ++V+T +
Sbjct: 507 LQVTSSSVRLVDSSSLA----------LVSEWRPPAGFSINVAAGSPTQVVVATGGGHLV 556
Query: 642 FILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
+ L V++ + E+ ++ L SE++C+ +
Sbjct: 557 Y-LEVQA-QAGGAAVVEVANVTLDSEVACVDV 586
>gi|195586770|ref|XP_002083143.1| GD13507 [Drosophila simulans]
gi|194195152|gb|EDX08728.1| GD13507 [Drosophila simulans]
Length = 1227
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 178/459 (38%), Gaps = 94/459 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLCCAALG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQ++ + +R S W P SI+ AV ++++ S
Sbjct: 513 DDALVQVYPDGIRHIR------------SDKRVNEWKAPGKKSITKCAVNQRQVVITLSG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ + ++ Y + + +E+ C+++
Sbjct: 561 RELVYFEMDPTGELNEY----TERSEMPAEIMCMAL----------------------GT 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGS-----IVLTNTMGTAIS 747
+P G + +G +V +LS P ++ L S + + + +T T
Sbjct: 595 VPEGEQRSWFLAVGLSDNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQG 654
Query: 748 GC---IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTEN 804
G P Y+ GL NG+LLR + P+S +T
Sbjct: 655 GLDDDAPAQRSGNNKGTIYLNIGLSNGVLLR--------------TVLDPVSGDLADTR- 699
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA 864
TR +G PV L + ++A+S R WL
Sbjct: 700 -------------------------TRYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYYH 734
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 735 QNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 773
>gi|401407861|ref|XP_003883379.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
gi|325117796|emb|CBZ53347.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
Length = 1233
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 127/570 (22%), Positives = 224/570 (39%), Gaps = 74/570 (12%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPW 98
K + ++ G+ +P + +VV + +EL+ + G +Q++ VFG I+ +A
Sbjct: 11 KPTAIVHALQGNFSAPRAQEVVVSRGRVLELLRPDDQGKLQAIASTEVFGIIRSIAAF-- 68
Query: 99 NKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRML 158
+ N +D L + SDSG+L + F E + F V G R G L
Sbjct: 69 --RLTGAN-----RDYLAIGSDSGRLVIVQFSAEKNEFERVHCETYGKTGIRRVVPGEYL 121
Query: 159 AVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGT 218
AVD G + V+A E + ++ ++ + + ++ S E S + I
Sbjct: 122 AVDPKGRTLMVAAVERQKFVYIVNRDNKA-----QLTISSPLEAHKSHAICHDLCGIDMG 176
Query: 219 IWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGPL 278
+ F S + S + P + +G L E+ L G N H I P
Sbjct: 177 FDNPLFASLEQNVESTDRKPATPGVTVPKGVCLWEMDL-GLN---HVIK--KATLPVPPS 230
Query: 279 AHCVVEVPRSYGFAFVFRI----GDALLMDLRDPHNPSCVYRTSLNFLPPALE---EQNF 331
AHC++ VP G + G+ LL D SC +P LE ++
Sbjct: 231 AHCLIPVPGGGGADGPSGVLVCCGNFLLYKKPDHEEVSCA-------IPRRLETGSDRGL 283
Query: 332 VDESCRVHDVDDEGLFNVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSWSWEPETDKI 391
V + VH + D + E D + I D G +E VC + D +
Sbjct: 284 VVVAFAVHRMKDFFFILIQT----EYGDIYKIEISHDEGVVREI---VCRY-----FDTV 331
Query: 392 P-KMVFCVDTGEFFMIEIAFGSD--------GHKVHLSECLYKGPPCK-ALLWVEGRFLS 441
P CV + + FG+ G C P + A++ + R L
Sbjct: 332 PVANALCVLKSGYLFVASEFGNHLFYQFTGIGSDASDPRCSSSHPLGREAIIAFKPRPLK 391
Query: 442 AFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRI 501
L +Q+++PI D+ V+D Q++ CG P +LRI
Sbjct: 392 ----------------NLALVDELQSLSPITDLKVLDAQGTGAPQVYVLCGKGPRSALRI 435
Query: 502 IRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTD 561
++ G+ +E++ + WT ++ + +++++F + VL++G +VTD
Sbjct: 436 LQHGLGVEEMADNE-LPGRARAVWTTKLSHQSAFDGYIIVAFEGSSLVLQIGDTVEEVTD 494
Query: 562 SVGFRPDVCTLACGLVADGLLVQIHQNAVR 591
S+ F +V +L L+ D +Q+H+ +R
Sbjct: 495 SL-FLTNVSSLLVALMYDDSFIQVHETGIR 523
>gi|60677959|gb|AAX33486.1| RE01065p [Drosophila melanogaster]
Length = 1227
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 178/459 (38%), Gaps = 94/459 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLCCAALG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQ++ + +R S W P SI+ AV ++++ S
Sbjct: 513 DDALVQVYPDGIRHIR------------SDKRVNEWKAPGKKSITKCAVNQRQVVITLSG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ + ++ Y + + +E+ C+++
Sbjct: 561 RELVYFEMDPTGELNEY----TERSEMPAEIMCMAL----------------------GT 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGS-----IVLTNTMGTAIS 747
+P G + +G +V +LS P ++ L S + + + +T T
Sbjct: 595 VPEGEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQG 654
Query: 748 GC---IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTEN 804
G P Y+ GL NG+LLR + P+S +T
Sbjct: 655 GLDDDAPAQRSGNNKGTIYLNIGLSNGVLLR--------------TVLDPVSGDLADTR- 699
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA 864
TR +G PV L + ++A+S R WL
Sbjct: 700 -------------------------TRYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYYH 734
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 735 QNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 773
>gi|351699158|gb|EHB02077.1| DNA damage-binding protein 1 [Heterocephalus glaber]
Length = 1144
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 26/235 (11%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R S LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSAPSRETDDTLVLSFVGQTRVLMLNGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ VGF D T CG VA L+QI +VRL A + + W P+
Sbjct: 446 TELVGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKA----------LVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
+ S+ + + + ++V+ + L + E+ ++ ++ E++C+ I
Sbjct: 496 KNNSVASGSSSQVVVAVGRALYY-------LQIHPRELRQISQTEMEHEVACLDI 543
>gi|24654874|ref|NP_728546.1| CG13900, isoform A [Drosophila melanogaster]
gi|23092721|gb|AAF47416.2| CG13900, isoform A [Drosophila melanogaster]
gi|60678131|gb|AAX33572.1| LD01809p [Drosophila melanogaster]
gi|220950356|gb|ACL87721.1| CG13900-PA [synthetic construct]
gi|289803030|gb|ADD20765.1| FI04459p [Drosophila melanogaster]
Length = 1227
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 178/459 (38%), Gaps = 94/459 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLCCAALG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQ++ + +R S W P SI+ AV ++++ S
Sbjct: 513 DDALVQVYPDGIRHIR------------SDKRVNEWKAPGKKSITKCAVNQRQVVITLSG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ + ++ Y + + +E+ C+++
Sbjct: 561 RELVYFEMDPTGELNEY----TERSEMPAEIMCMAL----------------------GT 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGS-----IVLTNTMGTAIS 747
+P G + +G +V +LS P ++ L S + + + +T T
Sbjct: 595 VPEGEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQG 654
Query: 748 GC---IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTEN 804
G P Y+ GL NG+LLR + P+S +T
Sbjct: 655 GLDDDAPAQRSGNNKGTIYLNIGLSNGVLLR--------------TVLDPVSGDLADTR- 699
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA 864
TR +G PV L + ++A+S R WL
Sbjct: 700 -------------------------TRYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYYH 734
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 735 QNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 773
>gi|195336406|ref|XP_002034829.1| GM14250 [Drosophila sechellia]
gi|194127922|gb|EDW49965.1| GM14250 [Drosophila sechellia]
Length = 1227
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 178/459 (38%), Gaps = 94/459 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLCCAALG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQ++ + +R S W P SI+ AV ++++ S
Sbjct: 513 DDALVQVYPDGIRHIR------------SDKRVNEWKAPGKKSITKCAVNQRQVVITLSG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ + ++ Y + + +E+ C+++
Sbjct: 561 RELVYFEMDPTGELNEY----TERSEMPAEIMCMAL----------------------GT 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGS-----IVLTNTMGTAIS 747
+P G + +G +V +LS P ++ L S + + + +T T
Sbjct: 595 VPEGEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQG 654
Query: 748 GC---IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTEN 804
G P Y+ GL NG+LLR + P+S +T
Sbjct: 655 GLDDDAPAQRSGNNKGTIYLNIGLSNGVLLR--------------TVLDPVSGDLADTR- 699
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA 864
TR +G PV L + ++A+S R WL
Sbjct: 700 -------------------------TRYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYYH 734
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 735 QNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 773
>gi|195490209|ref|XP_002093045.1| GE20993 [Drosophila yakuba]
gi|194179146|gb|EDW92757.1| GE20993 [Drosophila yakuba]
Length = 1227
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/459 (20%), Positives = 178/459 (38%), Gaps = 94/459 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 454 GNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLCCAALG 512
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D LVQ++ + +R S W P SI+ AV ++++ S
Sbjct: 513 DDALVQVYPDGIRHIR------------SDKRVNEWKAPGKKSITKCAVNQRQVVITLSG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ + ++ Y + + +E+ C+++
Sbjct: 561 RELVYFEMDPTGELNEY----TERSEMPAEIMCMAL----------------------GT 594
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGS----IVLTNTMGTAISG 748
+P G + +G +V +LS P ++ L S + +V + G
Sbjct: 595 VPEGEQRSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQG 654
Query: 749 CIPQDVRLVLADQ----FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTEN 804
+ D + Y+ GL NG+LLR + P+S +T
Sbjct: 655 ALDDDAPAPRSGNNKGTIYLNIGLSNGVLLR--------------TVLDPVSGDLADTR- 699
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA 864
TR +G PV L + ++A+S R WL
Sbjct: 700 -------------------------TRYLGSRPVKLFRIKMQGAEAVLAMSSRTWLSYYH 734
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 735 QNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 773
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L KG+ V HG+ +V+ + S+EL+ + G V ++ +FG
Sbjct: 2 YLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFGC 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +VV SDSG++ L + + V Q G
Sbjct: 62 IRALMAFRLTGG---------TKDYIVVGSDSGRIVILEYNAAKNALEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDR 175
R G+ A+D G + + A E +
Sbjct: 113 RRIVPGQYFAIDPKGRAVMIGAVEKQ 138
>gi|145348011|ref|XP_001418451.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578680|gb|ABO96744.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1196
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 114/512 (22%), Positives = 196/512 (38%), Gaps = 122/512 (23%)
Query: 427 PPCKALLWVEGRFLSAFVEMGD--------------------GMVLKEENGRLVYTSP-- 464
PPC +L ++ FL A E G+ ++ EE V+ P
Sbjct: 331 PPCVSLCVLKTGFLFAASEFGNHALYQFAGIGDDDAVESSSASLMETEEGYEPVFFDPRP 390
Query: 465 ---------IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTA 515
I ++ P+LDM + +E+ Q++ CG SLRI+R GI++ +L +
Sbjct: 391 LTNLYTIDTIDSLCPVLDMQAHNLTEEEMPQLYTLCGTGARSSLRILRQGIAMNELA-MS 449
Query: 516 PIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG 575
P+ +TV+ S+ Y S++++SF+ T VL +G ++V DS G TL
Sbjct: 450 PLPGQPNAIFTVKKSSSEEYDSYIIVSFLNATLVLSIGDTVSEVNDS-GILGTTTTLQAC 508
Query: 576 LVADGLLVQIHQNAVRLCMPTMVAHSGGIP----LSYPVCTSWFPEHVSISLGAVAHNMI 631
L++D L+QIH +R + P +S C S ++
Sbjct: 509 LMSDESLLQIHPGGLRHIKADKRINEWRTPGRKQISKCTCNS--------------KQVV 554
Query: 632 IVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVS 691
I T F L S ++ E++ + +++C+ I P+
Sbjct: 555 IALTGGEVIYFELD------SAGQLIEVEKLETSGDIACLDI-----------GPV---- 593
Query: 692 NSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIP 751
P G + +G++ +V V+S P + L+ LA A+ G P
Sbjct: 594 -------PEGALRNRFLAMGSYDGTVRVMSLNPDDCLQTLAV----------QALKGSAP 636
Query: 752 QDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAA 811
+ LVL Q + G+LL + N IR+ I
Sbjct: 637 SSL-LVL--QTAGTESTQGGLLL---------------------NVGMANGVLIRATI-- 670
Query: 812 TSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYT 871
D++ L + R +G LV S ++ALS RPWL + + +
Sbjct: 671 -------DQVSGQLSDMRMRFLGARAPKLVRTSVRGAPALVALSSRPWLGYSEKGTFVLA 723
Query: 872 SISFQPSTHATPVCSVECPKGILFVAENSLNL 903
IS+ P S +CP+G++ ++ +L +
Sbjct: 724 PISYVPLEEVCSFNSEQCPEGVVAISNQTLRI 755
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 9/144 (6%)
Query: 30 IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGT 89
+H + K S + +G+ + + ++V + +EL+ E G VQSV FG
Sbjct: 2 VHLYNLTLQKSSGINAAVYGNFSASKAQEIVVLRNKVVELLRPDESGRVQSVTSVEAFGI 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
+ +A + + N +D LV+ SDSG++ L F E + F V Q G
Sbjct: 62 ARSIATL----RLAGAN-----RDYLVLGSDSGRVVVLQFDKEKNAFVKVHQETYGKTGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYE 173
R G+ L D G I + A E
Sbjct: 113 RRIVPGQFLCADPKGRAICLGAVE 136
>gi|66553024|ref|XP_623333.1| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Apis mellifera]
gi|380015815|ref|XP_003691890.1| PREDICTED: splicing factor 3B subunit 3-like [Apis florea]
Length = 1217
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 190/475 (40%), Gaps = 87/475 (18%)
Query: 436 EGRFLSAF-VEMGDGMVLKEENGR-LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
E F SA +E GD R LV + +++PI+ V D +E Q++ CG
Sbjct: 370 EPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDTPQLYITCGR 429
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
P +LR++R G+ + ++ + + WTV+ +V + Y +++++SFV T VL +G
Sbjct: 430 GPRSTLRVLRHGLEVSEMA-VSELPGNPNAVWTVKRRVDEEYDAYIIVSFVNATLVLSIG 488
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
+VTDS GF TL+C + + LVQ++ + +R I V
Sbjct: 489 ETVEEVTDS-GFLGTTPTLSCSALGEDALVQVYPDGIR-----------HIRADKRVNEW 536
Query: 614 WFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
P +I AV ++++ + ++ E+
Sbjct: 537 KAPGKKTIVKCAVNQRQVVIALTGGELVYF-----------------------EMDPTGQ 573
Query: 674 PQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GL 728
++ ER+K S + ++ +V G + +G +V ++S P + +
Sbjct: 574 LNEYTERKKMPSEVMCMALGNV---AIGEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSM 630
Query: 729 RVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSV 788
+ L + + L A +++ L + Y+ GL+NG+LLR
Sbjct: 631 QALPAAAESLCIVEMGAKDANNSEELSLQQS-SLYLNIGLQNGVLLR------------- 676
Query: 789 APIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLD 848
+ PIS +T TR +G V L + +
Sbjct: 677 -TVLDPISGDLADTR--------------------------TRYLGSRAVKLFRIKMQGN 709
Query: 849 ADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++A+S R WL ++ T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 710 QAVLAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRI 764
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L + + + HG+ +++ + S+EL+ + G V ++ VFG
Sbjct: 2 YLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFGI 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +VV SDSG++ L + + F V Q G
Sbjct: 62 IRSLMAFRLTGG---------TKDYIVVGSDSGRIVILEYIPAKNVFEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLS 182
R G+ LA+D G + + A E + ++ L+
Sbjct: 113 RRIVPGQYLAIDPKGRAVMIGAIEKQKLVYILN 145
>gi|147906138|ref|NP_001083624.1| DNA damage-binding protein 1 [Xenopus laevis]
gi|82186503|sp|Q6P6Z0.1|DDB1_XENLA RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|38303806|gb|AAH61946.1| Ddb1 protein [Xenopus laevis]
Length = 1140
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLTTESNEQGSYVVVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R+ LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRVAADRDTDDTLVLSFVGQTRVLTLTGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRL 592
TD GF D T CG VA L+QI +VRL
Sbjct: 446 TDLAGFVDDQQTFFCGNVAHQQLIQITSASVRL 478
>gi|301616502|ref|XP_002937687.1| PREDICTED: DNA damage-binding protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 1140
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLTAESNEQGSYVVVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R+ LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRVAADRDTDDTLVLSFVGQTRVLTLTGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRL 592
TD GF D T CG VA L+QI +VRL
Sbjct: 446 TDLAGFVDDQQTFFCGNVAHQQLIQITSASVRL 478
>gi|405970039|gb|EKC34976.1| DNA damage-binding protein 1 [Crassostrea gigas]
Length = 1160
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 178/472 (37%), Gaps = 113/472 (23%)
Query: 446 MGDGMVLK-----EENGRLVYT-SPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K +ENG V N+ PILDM VVD + + Q+ C G EGSL
Sbjct: 349 LGDSQLVKLNVEPDENGSYVQEMERFTNLGPILDMCVVDLERQGQGQLVTCSGAYKEGSL 408
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W++R+ S Y + +VLSFV +TRVL + +
Sbjct: 409 RIIRNGIGIHE--HASIDLPGIKGIWSLRVN-SPEYDNMIVLSFVGQTRVLMLNGEEVEE 465
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLC------MPTMVAHSGGIPLSYPVCTS 613
T+ G D T C V L+QI +VRL + HSGG
Sbjct: 466 TELSGIESDQQTFLCANVVHNQLLQITPQSVRLISCDNQKLLKEWKHSGG---------- 515
Query: 614 WFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
+ISL + ++ + + L + +I ++ ++ E++C+ +
Sbjct: 516 -----KNISLASSNTCQVVACVGSELYY-------LELLQGDIKQVSTSTMEHEVACVDL 563
Query: 674 -PQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRV-L 731
P + E + I L ++ S VLS L V +
Sbjct: 564 TPLREGEEKSHLCAIGLWTD----------------------ISARVLSLPDFNSLHVEM 601
Query: 732 ASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPI 791
G I+ + + T G Y+L L +G L F + D
Sbjct: 602 LGGEIIPRSILMTTFEGI------------HYLLCALGDGSLFYFNFNID---------- 639
Query: 792 HSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADM 851
T F K ++ + Q P L ++
Sbjct: 640 --------------------TGYFTEKRKVTLGTQ----------PTVLRTFRSLSTTNV 669
Query: 852 IALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
A SDRP ++ ++ H L +++++ + H P+ S P + + +L +
Sbjct: 670 FACSDRPTVIYSSNHKLVFSNVNLKEVNHMCPLNSEGYPDSLALANDGTLTI 721
>gi|357519461|ref|XP_003630019.1| DNA damage-binding protein [Medicago truncatula]
gi|355524041|gb|AET04495.1| DNA damage-binding protein [Medicago truncatula]
Length = 1171
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 115/512 (22%), Positives = 188/512 (36%), Gaps = 156/512 (30%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY-------- 518
N+ PI+D VVD + + Q+ C G +GSLR++R+GI + + + +P++
Sbjct: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRVVRNGIGINE--QVSPLFSCLSVGSF 404
Query: 519 ----------------------QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGL-N 555
QGI G W++R DP+ +FLV+SF+ ETR+L + L +
Sbjct: 405 TQDTTKRKRFFFFLIINNTLELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 464
Query: 556 FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTM--VAHSGGIPLSYPVCTS 613
+ T+ GF V TL C LVQ+ N+VRL + + + P Y V
Sbjct: 465 ELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSNSVRLVSSSTRELLNEWHAPSDYSV--- 521
Query: 614 WFPEHVSISLGAVAHNMIIVSTSNPCF------------------------------LFI 643
+V+ + + N I S+P LF+
Sbjct: 522 ----NVATANATQSQNHFIFQISSPSLSHGNIMICLSCKDVDNWSSTSSSLSLIYRVLFL 577
Query: 644 LGVRS------------LSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVS 691
L S L + + E++H +L+ E+SC+ I +PI
Sbjct: 578 LVAASVLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDI-----------NPIGENP 626
Query: 692 NSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIP 751
N S A +G I S+ L+ + KE L G I+ + + A G
Sbjct: 627 NQSQLA-----AVGMWTDISVRLFSLPELNLITKEHL----GGEIIPRSVLLCAFEGIS- 676
Query: 752 QDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAA 811
Y+L L +G LL F +
Sbjct: 677 -----------YLLCALGDGHLLNF--------------------------------MLN 693
Query: 812 TSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYT 871
TS+ E D ++L G P+ L S + A SDRP ++ ++ L Y+
Sbjct: 694 TSTGELTDRKKVSL--------GTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYS 745
Query: 872 SISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+++ + +H P S P + E L +
Sbjct: 746 NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 777
>gi|303285956|ref|XP_003062268.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456679|gb|EEH53980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1213
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 176/443 (39%), Gaps = 96/443 (21%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
I+++ P+LD + E+ Q++A CG +LR++R G++L ++ +P+
Sbjct: 402 IESLCPVLDAQCHNLTSEETPQVYALCGAGSRSTLRVLRQGVALSEMA-VSPLPGNPNAV 460
Query: 525 WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
+TV+ ++D + +++V+SFV T VL +G +V+DS GF TL+ L+ D L+Q
Sbjct: 461 FTVKKNIADEFDAYIVVSFVNATLVLSIGETVEEVSDS-GFLGTTPTLSASLLGDDSLLQ 519
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFI 643
H +R + W P +I+ A + ++++ S ++
Sbjct: 520 AHPGGLRHVR------------ADKRINEWRCPGRKTITRVACNNRQVVIALSGGEIIYF 567
Query: 644 LGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVI 703
L S ++ E++ + +++C+ + P+ P G +
Sbjct: 568 ----ELD-STGQLMEIEKLETNGDVACLHV-----------GPV-----------PEGSL 600
Query: 704 IGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQ-- 761
+G+ +V VLS + L+ TMG P + ++ +
Sbjct: 601 RNRFLAVGSFDSTVRVLSLSADDCLQ-----------TMGVQALAAAPCSLLMLQTREGG 649
Query: 762 FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDEL 821
Y+ GL NG+LLR E D +
Sbjct: 650 LYLNVGLANGVLLRAEV----------------------------------------DRV 669
Query: 822 PINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA-RHSLAYTSISFQPSTH 880
L R +G P L + M+ALS RPWL + A +S++ H
Sbjct: 670 TGQLSDTRARFLGARPPKLHGATVRGQPAMLALSSRPWLGHVDLQRRFALAPLSYEALEH 729
Query: 881 ATPVCSVECPKGILFVAENSLNL 903
A S +CP+G++ VA ++L +
Sbjct: 730 AADFTSDQCPEGVVAVAGSTLRI 752
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
Query: 30 IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGT 89
+H + KG + +G+ +P + ++V + +EL+ + G +Q++ VFG
Sbjct: 1 MHLYNLTLQKGGGIQCAVYGNFSAPKAQEIVASRNKVLELLRPDDAGKMQTIVSTEVFGV 60
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
++ L+ + N +D +VV SDSG++ L+F E F V Q G
Sbjct: 61 VRSLSAF----RLTGAN-----RDYVVVGSDSGRIVVLSFDKEKSAFVKVHQETFGKSGC 111
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
R G+ LAVD G + + A E ++ L+ + +++
Sbjct: 112 RRIVPGQFLAVDPKGRAVMIGAIEKSKIVYVLNRDTSANL 151
>gi|324501533|gb|ADY40680.1| Splicing factor 3B subunit 3 [Ascaris suum]
Length = 1214
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 180/454 (39%), Gaps = 100/454 (22%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L I ++ P++ + D +E Q++A CG + +L+++R+G+ + ++ + +
Sbjct: 396 LAVVDQIDSLCPLISCHIDDLANEDAPQLYALCGRSARSALKVLRNGLEVTEMA-VSELP 454
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D Y S +V+SFV T VL +G +VTDS GF TL CGL+
Sbjct: 455 GNPNAVWTVKRNIDDKYDSHIVVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLGCGLIG 513
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D L+Q++ + +R I V P +I A+ + ++ +
Sbjct: 514 DDALLQVYPDGIR-----------HIRADRRVNEWKAPGKRTIIKCALNRRQVAIALAGG 562
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ EL ++ ERR+ + + +S S +
Sbjct: 563 EIVYF-----------------------ELDVTGQLNEYTERRELPADVLCMSLSEI--- 596
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGS--------IVLTNTMGTAISGCI 750
P G + +G +V ++S P++ L L+ + IVL G S
Sbjct: 597 PEGELRSRFLTVGLADKTVRIISLDPQDCLAPLSMQALPSEPESIIVLEMFGGEGQS--- 653
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
A ++ GL+NG LLR
Sbjct: 654 --------ASTVHLNIGLQNGCLLR----------------------------------- 670
Query: 811 ATSSFESKDELPIN-LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
T+ + EL N + + TR + + V + S DA ++A S R WLL +
Sbjct: 671 -TTVDQVTGELTDNRTRYLGTRSVNLFRVRI----QSKDA-IMAASSRAWLLYNYQSRFH 724
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S+ +A S +CP+GI+ +AEN+L +
Sbjct: 725 LTPLSYTALEYAAGFSSEQCPEGIVAIAENTLRI 758
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 32 YLAKCVLKGSVVL-QVAHGHLRS-PTSNDVVFGKETSIELVIIG-EDGIVQSVCEQAVFG 88
+L L+GS + Q HG P +V + ++L+ + G V +C VFG
Sbjct: 2 HLYNLTLQGSSAINQAIHGSFCGLPKQQEVCVARGNLLQLLFCDPKTGKVHVMCSHNVFG 61
Query: 89 TIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
I+ L KD +VV SD+G++ L + + F V Q G
Sbjct: 62 IIRSLLAFRLTGG---------SKDYIVVGSDAGRIVILEYNPQKVCFERVHQETFGKTG 112
Query: 149 NSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
R G+ LAVD G I + A E + ++ ++ + +++
Sbjct: 113 CRRIVPGQHLAVDPKGRAILIGAVERQKLVYVMNRDAAANL 153
>gi|307111604|gb|EFN59838.1| hypothetical protein CHLNCDRAFT_29381 [Chlorella variabilis]
Length = 1108
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 183/449 (40%), Gaps = 119/449 (26%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGIS-LEKLLRTAPIYQGITGTW 525
N+ PI+D +VVD + + Q+ C G +GSLRI+R+GI +E+ L P GI W
Sbjct: 368 NLGPIVDFAVVDLERQGQGQVVTCSGTGVDGSLRIVRNGIGVVEQALVELP---GIKDLW 424
Query: 526 TVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSV---GFRPDVCTLACGLVADGLL 582
++R D + ++LVL+F ETRVL G+N D D GF TL C L
Sbjct: 425 SLRKTFMDAHDTYLVLTFSGETRVL--GMNAEDELDEAEIPGFNSTALTLCCANTVHDQL 482
Query: 583 VQIHQNAVRL--CMPTMVAHSGGIPLSYPVCTSWFP-EHVSISLGAVAHNMIIVSTSNPC 639
+Q+ A RL CM + + T W P I++ A + ++ +
Sbjct: 483 LQVTATAFRLVDCM------------TQQLVTQWEPGADGRITIAAASPTQLVAAVGGRT 530
Query: 640 FLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS-VPAL 698
++ L + +I E ++L ++++C+ I +P+ +S +S V A+
Sbjct: 531 LVY------LELGDGQIEEKGRVQLDADIACLDI-----------TPVGELSEASEVVAV 573
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV--RL 756
+ + + F + PS+ L F K +P DV R
Sbjct: 574 GSWALEAHIFAL----PSLAPL-FREK------------------------LPTDVIPRS 604
Query: 757 VLADQF----YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAAT 812
L QF Y++ GL +G L+ + D++ P+ R IA
Sbjct: 605 TLFAQFEGDTYLMYGLGDGQLVNYRL--DADGPTD------------------RKKIALG 644
Query: 813 SSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTS 872
+ PI+L+ +R G VF A SDRP ++ ++ L Y++
Sbjct: 645 TK-------PISLRTFRSR--GAAAVF-------------AASDRPTVIYSSNRKLLYSN 682
Query: 873 ISFQPSTHATPVCSVECPKGILFVAENSL 901
++ +H T + P + + +L
Sbjct: 683 LNENEVSHMTSFNTAAFPDSLALGKQEAL 711
>gi|302807210|ref|XP_002985318.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
gi|300147146|gb|EFJ13812.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
Length = 1207
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/448 (20%), Positives = 186/448 (41%), Gaps = 84/448 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ +++ PI+DM + + +E+ Q+F CG P +LRI+R G+++ ++ +
Sbjct: 394 LIQIDEGESLMPIMDMKIANLFEEETPQIFVACGRGPRSTLRILRPGLAVSEMAVSQ--L 451
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WTV+ V+D + +++V+SF+ T VL +G +V+DS GF +L L+
Sbjct: 452 PGVPSAVWTVKKSVTDEFDAYIVVSFLNATLVLSIGETVEEVSDS-GFLDTTPSLQVSLL 510
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSN 637
D L+Q++ N +R + + P + + +G+ ++I +
Sbjct: 511 GDDSLMQVYPNGIRHIRSLVRINEWKTPGKKTI----------VKVGSNRMQVVIGLSGG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
F + ++ E++ + +++C++I PE R+ S ++
Sbjct: 561 ELIYFEMDPTG------QLMEIEKREMSGDVACLAIGPV-PEGRQRSRFLA--------- 604
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL--TNTMGTAISGCIPQDVR 755
+G++ ++ +LS P + + +L+ + + + + +
Sbjct: 605 ------------VGSYDNTIRILSLDPNDCMHILSVQMVASPPESLLLLEVQASTGGEDG 652
Query: 756 LVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSF 815
V ++ AGL+NG+LLR E V + +S T
Sbjct: 653 AVYPASVFLNAGLQNGVLLRTE----------VDMVTGQLSGT----------------- 685
Query: 816 ESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISF 875
TR +G+ L S ++ LS RPWL + T +S+
Sbjct: 686 -------------RTRFLGLRAPKLFATSVRGRQALLCLSSRPWLGYIHQGHFLLTPLSY 732
Query: 876 QPSTHATPVCSVECPKGILFVAENSLNL 903
+ +A S +C +G++ VA +L +
Sbjct: 733 ETLEYAASFSSDQCAEGVVAVAGEALRV 760
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNS 107
+G+ S ++V G+ +EL+ ++G +Q++ +FG ++ LA +F S
Sbjct: 19 YGNFIGGKSQEIVIGRGKILELLRPDDNGKLQTLLAVEIFGVVRSLA------QFRLTGS 72
Query: 108 QVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLI 167
KD LVV SDSGK+ L + + + F PV + G R G+ L+VD G +
Sbjct: 73 H---KDYLVVGSDSGKIVILEYNRDRNAFDPVHKETFGKSGCRRIVPGQFLSVDPKGRAV 129
Query: 168 AVSAYEDRLGLFSLSMSSGSDI 189
++A E + ++ L+ + + +
Sbjct: 130 MIAATEKQKLVYVLNRDNAARL 151
>gi|328770812|gb|EGF80853.1| hypothetical protein BATDEDRAFT_29900 [Batrachochytrium
dendrobatidis JAM81]
Length = 1213
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 174/440 (39%), Gaps = 85/440 (19%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
++++ P++D V++ DE Q++A CG + RI+R G+ + ++ + +
Sbjct: 419 MESLCPLIDAKVLNLTDENSPQIYALCGRGSRSTFRILRHGLDVSEMA-VSELPGNPNAI 477
Query: 525 WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
WTVR VSD Y S++++SF+ T VL +G +VTD+ G T+ G + + LVQ
Sbjct: 478 WTVRRSVSDIYDSYIIISFINATLVLSIGETVEEVTDT-GVLATTSTITVGQLGENALVQ 536
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
++ +R I V P + SI A ++V+ SN ++
Sbjct: 537 VYPQGIRY-----------IRADKRVSEWKAPTNQSIVSAACNQRQVVVALSNNEIVYF- 584
Query: 645 GVRSLSVSHYEIYEMQHMR-LQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVI 703
L VS + + E Q + + S + C+S+ SPI P G +
Sbjct: 585 ---ELDVSGH-LNEFQDRKEMSSRVLCLSL-----------SPI-----------PTGRL 618
Query: 704 IGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFY 763
IG +V +LS P+ L L+
Sbjct: 619 RARFLAIGCADLTVRILSLDPESCLHPLS------------------------------- 647
Query: 764 VLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPI 823
+ PPDS + + +S F N + +G+ + +S
Sbjct: 648 ---------MQALSAPPDSLAMIDMPDPTTGVSNLFLNI-GLANGVLLKTCVDSGSG--- 694
Query: 824 NLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATP 883
N+ R +G V L L + ++ALS RPW+ T +S++ + +
Sbjct: 695 NMSDTRMRFLGSRGVKLFLLKIQGETGLLALSSRPWISFTYHSRSKLMPLSYESLEYGSS 754
Query: 884 VCSVECPKGILFVAENSLNL 903
CS +C +GI+ + N+L +
Sbjct: 755 FCSEQCTEGIVAITGNTLRI 774
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 10/138 (7%)
Query: 49 GHLRSPTSNDVVFGKETSIELVIIG-EDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNS 107
G+ S ++V + +EL+ G + S+ VFG I+ LA F +
Sbjct: 20 GNFSGIKSQEIVVAHTSVLELLRPDPSTGKIVSLLSHQVFGLIRSLAA------FRLAGA 73
Query: 108 QVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLI 167
KD LVV SDSG++ L + + F V Q G R G+ LA D G +
Sbjct: 74 S---KDYLVVGSDSGRIVILEYNPAKNTFDKVHQETYGKTGARRVVPGQYLAADPKGRAV 130
Query: 168 AVSAYEDRLGLFSLSMSS 185
+ A E + + L+ S
Sbjct: 131 MIGAIEKQKLAYILNRDS 148
>gi|302773427|ref|XP_002970131.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
gi|300162642|gb|EFJ29255.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
Length = 1207
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/448 (20%), Positives = 186/448 (41%), Gaps = 84/448 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ +++ PI+DM + + +E+ Q+F CG P +LRI+R G+++ ++ +
Sbjct: 394 LIQIDEGESLMPIMDMKIANLFEEETPQIFVACGRGPRSTLRILRPGLAVSEMAVSQ--L 451
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WTV+ V+D + +++V+SF+ T VL +G +V+DS GF +L L+
Sbjct: 452 PGVPSAVWTVKKSVTDEFDAYIVVSFLNATLVLSIGETVEEVSDS-GFLDTTPSLQVSLL 510
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSN 637
D L+Q++ N +R + + P + + +G+ ++I +
Sbjct: 511 GDDSLMQVYPNGIRHIRSLVRINEWKTPGKKTI----------VKVGSNRMQVVIGLSGG 560
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
F + ++ E++ + +++C++I PE R+ S ++
Sbjct: 561 ELIYFEMDPTG------QLMEIEKREMSGDVACLAIGPV-PEGRQRSRFLA--------- 604
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL--TNTMGTAISGCIPQDVR 755
+G++ ++ +LS P + + +L+ + + + + +
Sbjct: 605 ------------VGSYDNTIRILSLDPNDCMHILSVQMVASPPESLLLLEVQASTGGEDG 652
Query: 756 LVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSF 815
V ++ AGL+NG+LLR E V + +S T
Sbjct: 653 AVYPASVFLNAGLQNGVLLRTE----------VDMVTGQLSGT----------------- 685
Query: 816 ESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISF 875
TR +G+ L S ++ LS RPWL + T +S+
Sbjct: 686 -------------RTRFLGLRAPKLFATSVRGRQALLCLSSRPWLGYIHQGHFLLTPLSY 732
Query: 876 QPSTHATPVCSVECPKGILFVAENSLNL 903
+ +A S +C +G++ VA +L +
Sbjct: 733 ETLEYAASFSSDQCAEGVVAVAGEALRV 760
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNS 107
+G+ S ++V G+ +EL+ ++G +Q++ +FG ++ LA +F S
Sbjct: 19 YGNFIGGKSQEIVIGRGKILELLRPDDNGKLQTLLAVEIFGVVRSLA------QFRLTGS 72
Query: 108 QVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLI 167
KD LVV SDSGK+ L + + + F PV + G R G+ L+VD G +
Sbjct: 73 H---KDYLVVGSDSGKIVILEYNRDRNAFDPVHKETFGKSGCRRIVPGQFLSVDPKGRAV 129
Query: 168 AVSAYEDRLGLFSLSMSSGSDI 189
++A E + ++ L+ + + +
Sbjct: 130 MIAATEKQKLVYVLNRDNAARL 151
>gi|385865228|gb|AFI92852.1| DNA damage-binding protein 1 [Danio rerio]
Length = 1140
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 26/235 (11%)
Query: 446 MGDGMVLK---EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K + N + Y ++ N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNDQGSYVGVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + S LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSESSRDTDDMLVLSFVGQTRVLMLSGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ GF + T CG VA L+QI +VRL S + + W P+
Sbjct: 446 TELQGFVDNQQTFFCGNVAHQQLIQITSVSVRLVTQD----------SKALVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
+IS+ + + ++++ L+ L + S + EM+H E++C+ I
Sbjct: 496 RNISVASCNNTQVVLAVGR--VLYYLQILSGELKQISSTEMEH-----EVACLDI 543
>gi|41055225|ref|NP_956920.1| DNA damage-binding protein 1 [Danio rerio]
gi|34784892|gb|AAH56837.1| Zgc:63840 [Danio rerio]
Length = 897
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 26/235 (11%)
Query: 446 MGDGMVLK---EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K + N + Y ++ N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLVKLNVDSNDQGSYVGVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + S LVLSFV +TRVL + +
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGLWPLRSESSRDTDDMLVLSFVGQTRVLMLSGEEVEE 445
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ GF + T CG VA L+QI +VRL S + + W P+
Sbjct: 446 TELQGFVDNQQTFFCGNVAHQQLIQITSVSVRLVTQD----------SKALVSEWKEPQG 495
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
+IS+ + + ++++ L+ L + S + EM+H E++C+ I
Sbjct: 496 RNISVASCNNTQVVLAVGR--VLYYLQILSGELKQISSTEMEH-----EVACLDI 543
>gi|312370905|gb|EFR19207.1| hypothetical protein AND_22901 [Anopheles darlingi]
Length = 1287
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 116/536 (21%), Positives = 201/536 (37%), Gaps = 132/536 (24%)
Query: 392 PKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAF-VEMGDGM 450
P CV F + FG+ +L + + G E F SA +E GD
Sbjct: 408 PATAMCVLKTGFLFVACEFGNH----YLYQIAHLGDDDD-----EPEFSSAMPLEEGDTF 458
Query: 451 VLKEENGR-LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLE 509
+ LV I + APIL V D +E Q++ CG P S+R++R G+ +
Sbjct: 459 FFAPRQLKNLVMVDDIPSYAPILGCQVADLANEDTPQLYLACGRGPRSSIRVLRHGLEVS 518
Query: 510 KLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
++ + + WTV+ ++ D + +++++SFV T VL +G +VTDS P
Sbjct: 519 EMA-VSELPGNPNAVWTVKKRIDDEFDAYIIVSFVNATLVLSIGDTVEEVTDSGFLVP-- 575
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHN 629
+ D LVQ++ + +R I V P +I AV
Sbjct: 576 -------LGDDALVQVYPDGIR-----------HIRADKRVNEWKAPGKKTIMKCAVNQR 617
Query: 630 MIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISL 689
++++ S ++ E+ ++ ER+K S +
Sbjct: 618 QVVIALSGGELVYF-----------------------EMDPTGQLNEYTERKKMPSEVMC 654
Query: 690 VSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKE-----GLRVLASGS----IVLTN 740
++ SV P+G + +G +V ++S P + ++ L S + IV
Sbjct: 655 MALGSV---PSGEQRSWFLAVGLADNTVRIISLDPSDCLSPRSMQALPSAAESLCIVEMG 711
Query: 741 TMGTA-------------ISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSS 787
T+ TA SGCI Y+ GL NG+LLR
Sbjct: 712 TVETAANDDDDDDDAPLKTSGCI------------YLNIGLTNGVLLR------------ 747
Query: 788 VAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSL 847
+ P+S +T TR +G PV L +
Sbjct: 748 --TVLDPVSGDLADTR--------------------------TRYLGSRPVKLFRIQMQG 779
Query: 848 DADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
++A+S R WL ++ T +S++ +A+ S +C +GI+ ++ N+L +
Sbjct: 780 SEAVLAMSSRSWLSYYYQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRI 835
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 11/165 (6%)
Query: 23 PASPPRNIHYLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQS 80
P S P YL +L + + + HG +++ K +ELV + G V +
Sbjct: 66 PHSGPGRKMYLYNFILQRATGITHAVHGSFAGTKLQEILLAKGKGLELVRPDPNTGKVHT 125
Query: 81 VCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVA 140
+ + VFG ++ L F KD V+ SDSG++ L + ++ V
Sbjct: 126 LLQTEVFGVVRSLM------SFRLTGGS---KDYAVIGSDSGRIVILEYNPVKNQLEKVH 176
Query: 141 QVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
Q G R G+ L++D G + + A E + ++ L+ S
Sbjct: 177 QETFGKSGCRRIVPGQYLSIDPKGRAVMIGAIEKQKLVYILNRDS 221
>gi|383847297|ref|XP_003699291.1| PREDICTED: splicing factor 3B subunit 3-like [Megachile rotundata]
Length = 1217
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 188/476 (39%), Gaps = 89/476 (18%)
Query: 436 EGRFLSAF-VEMGDGMVLKEENGR-LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
E F SA +E GD R LV + +++PI+ V D +E Q++ CG
Sbjct: 370 EPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDTPQLYITCGR 429
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
P +LR++R G+ + ++ + + WTV+ +V + Y +++++SFV T VL +G
Sbjct: 430 GPRSTLRVLRHGLEVSEMA-VSELPGNPNAVWTVKRRVDEEYDAYIIVSFVNATLVLSIG 488
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
+VTDS GF TL+C + + LVQ++ P + H I V
Sbjct: 489 ETVEEVTDS-GFLGTTPTLSCSALGEDALVQVY--------PDGIRH---IRADKRVNEW 536
Query: 614 WFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
P +I AV ++++ + ++ E+
Sbjct: 537 KAPGKKTIVKCAVNQRQVVIALTGGELVYF-----------------------EMDPTGQ 573
Query: 674 PQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLR---- 729
++ ER+K S + ++ +V G + +G +V ++S P + L
Sbjct: 574 LNEYTERKKMPSEVMCMALGNVAI---GEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSM 630
Query: 730 --VLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSS 787
+ A+ + MG + + Y+ GL+NG+LLR
Sbjct: 631 QALPAAAESLCIVEMGAKDAN--NSEELSSQQSSLYLNIGLQNGVLLR------------ 676
Query: 788 VAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSL 847
+ PIS +T TR +G PV L +
Sbjct: 677 --TVLDPISGDLADTR--------------------------TRYLGSRPVKLFRIKMQG 708
Query: 848 DADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ ++A+S R WL ++ T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 709 NQAVLAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRI 764
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L + + + HG+ +++ + S+EL+ + G V ++ VFG
Sbjct: 2 YLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFGI 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ L KD +VV SDSG++ L + + F V Q G
Sbjct: 62 IRSLMAFRLTGG---------TKDYIVVGSDSGRIVILEYIPAKNIFEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLS 182
R G+ LA+D G + + A E + ++ L+
Sbjct: 113 RRIVPGQYLAIDPKGRAVMIGAIEKQKLVYILN 145
>gi|430813298|emb|CCJ29330.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1197
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 176/445 (39%), Gaps = 85/445 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ + ++ P++D +++ DE Q++A CG P + R +R G+ + +++ + +
Sbjct: 406 LLLVDDLNSMNPLMDSKILNLTDEDAPQIYALCGRGPRSTFRTLRYGLEVNEIVASG-LP 464
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
T WT ++ SD Y +++VLSFV T VL +G +V+D+ GF TLA +
Sbjct: 465 GSPTAVWTTKLTSSDQYDAYIVLSFVNGTLVLSIGETVEEVSDT-GFLSSSPTLAVQQLG 523
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D L+Q+H +R I V P+H SI ++V+ SN
Sbjct: 524 DDALIQVHPKGIR-----------HIQADKRVNEWKTPQHRSIVQVTTNQRQVVVALSNG 572
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
E+ + L E + ++ +R++ + V++ S+ +
Sbjct: 573 -------------------EIVYFELDDEGNL----NEYQDRKQMTGS---VTSLSIGHV 606
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVL 758
P G +G +V ++S P+ L L+ ++ S CI ++
Sbjct: 607 PEGRQRHPFLAVGCDDSTVRIISLEPENTLESLSVQALTAPPN-----SLCI-MSMKDGN 660
Query: 759 ADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESK 818
+ FY+ GL NG+ LR + S+ + K
Sbjct: 661 IETFYLHIGLFNGVYLR--------------------------------SVLELSTGQLK 688
Query: 819 DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPS 878
D TR +G PV L ++ +IALS RPWL SL + +
Sbjct: 689 D--------TRTRFLGSRPVKLFSVTIQNQLSVIALSSRPWLSYIINASLHLVPLIYDSL 740
Query: 879 THATPVCSVECPKGILFVAENSLNL 903
+ S +C +GI+ + L +
Sbjct: 741 EYCWGFSSEQCSEGIVGIQGQDLKI 765
>gi|313238818|emb|CBY20011.1| unnamed protein product [Oikopleura dioica]
gi|313245836|emb|CBY34826.1| unnamed protein product [Oikopleura dioica]
Length = 1135
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 170/443 (38%), Gaps = 108/443 (24%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI DM +VD+ + + Q+ GV GSLRIIR+G+ + + + +G+ G W
Sbjct: 357 NLGPIKDMCIVDFEKQGQGQLVTASGVGTGGSLRIIRNGVGIHEY--ASIDLEGVKGLWA 414
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRV-GLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ S L+LSFV +T LR+ G + T+V + GF T+ G V D +QI
Sbjct: 415 LKYLSSSTKQDSLLLSFVGQTIFLRLEGQDVTEVEEIPGFTNGEQTMYAGNVTDQQFLQI 474
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP-EHVSISLGAVAHNMIIVSTSNPCFLFIL 644
+ VRL + SW P E+ I+L +V N +++ +
Sbjct: 475 TEKQVRLIADESLK------------GSWEPEENTQINLCSVNKNQVLLGVGSTAIY--- 519
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L ++ EI E SE++C+ I P +++ SS
Sbjct: 520 ----LEINDCEIVEKSRHVFDSEIACVDIS---PLQKEMSSDF----------------- 555
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQF-- 762
F IG +V V L S ++ +G I IP R VL + F
Sbjct: 556 ---FTIGLWNVTVSV---------NKLPSMEVIAKMELGGNI---IP---RSVLLNSFGE 597
Query: 763 ----YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESK 818
Y+L + +G L + D SF SK
Sbjct: 598 NNTPYLLVSIGDGALFYIKLNED-------------------------------HSFSSK 626
Query: 819 DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPS 878
+ ++G P L S + + A SDRP ++ + + +++++ +
Sbjct: 627 KRI----------QLGTQPTSLNKFQTSNGSTVFACSDRPAVIHSTNEKIFFSNVNLKQV 676
Query: 879 THATPVCSVECPKGILFVAENSL 901
H + + P + V EN+L
Sbjct: 677 NHMCVLDTEGYPNALALVNENAL 699
>gi|307109500|gb|EFN57738.1| hypothetical protein CHLNCDRAFT_56079 [Chlorella variabilis]
Length = 1144
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 179/460 (38%), Gaps = 100/460 (21%)
Query: 370 GNAKEPSKHVCSWSWE-PETDKIPK-MVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKG- 426
G P W +K+P M C + G+ + + + + +G +V Y
Sbjct: 239 GAGDGPGGQRAVWGGPCARAEKLPACMHACSEFGDIYRVTLDY--EGEQVKELRIKYFDS 296
Query: 427 -PPCKALLWVEGRFLSAFVEMGDGMVLK----------------------EENGRLVYTS 463
PP ++ + FL A E GD + + EE + V+
Sbjct: 297 IPPATSICLMRKGFLFAASEFGDHALYQFSSLGDDDEGGVESSSATLMETEEGYQPVFFD 356
Query: 464 P-----------IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL- 511
P + ++APILDM V + E+ Q++A CG +LR++R G+++
Sbjct: 357 PRPLSNLEALDRMDSLAPILDMKVANLAGEEIPQIYAACGRGSRSTLRVLRPGLAVTGKR 416
Query: 512 ----LRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRP 567
+ +P+ T WT++ V D + +++V+SF T VL +G +V DS GF
Sbjct: 417 AAHEMAVSPLPGNPTAVWTIKRSVGDEFDAYIVVSFSNATLVLSIGETVEEVNDS-GFNG 475
Query: 568 DVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPE-HVSISLGAV 626
+V TL L+AD ++Q++ N +R P + P + + E V+I+LG
Sbjct: 476 NVPTLQTQLLADDSMLQVYPNGLRHIRPDRRINEWRAPGRKTIVKATTNERQVAIALGG- 534
Query: 627 AHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSP 686
+I NP + + E + + +++C+ + +P
Sbjct: 535 --GEVIYFELNPQGMLV--------------ESEKREMGGDVACLDV-----------AP 567
Query: 687 ISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAI 746
+ P G +G + + VLS P L+VL+ T +G
Sbjct: 568 V-----------PEGRTRCAFLAVGMYDGAARVLSLQPDSTLKVLS------TQAVGATP 610
Query: 747 SGCIPQDVRLVLAD---------QFYVLAGLRNGMLLRFE 777
+ D L+ D ++ GL NG+LLR E
Sbjct: 611 ESVLLLDSPLMGKDGTEEGAGSGALFLQVGLVNGVLLRTE 650
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNS 107
+G+ +P +++V + +EL+ + G VQ + VFG I+ LA F +
Sbjct: 19 YGNFSAPKVHEIVAARGKVLELLRPDDAGKVQVIHSTEVFGIIRSLA------PFRFPGA 72
Query: 108 QVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG--C 165
Q +D ++ SDSG++ L + E + F + G R G LAVD G C
Sbjct: 73 Q---QDYVICGSDSGRIVILQYNKEKNCFTRIHTETFGKSGCRRIVPGEYLAVDPKGRAC 129
Query: 166 LIAV 169
+IA
Sbjct: 130 MIAA 133
>gi|357478323|ref|XP_003609447.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355510502|gb|AES91644.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 1225
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 186/454 (40%), Gaps = 96/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV P++++ I+DM V + +E+ Q+F CG P SLRI+R+G+++ ++
Sbjct: 404 LVRIDPVESLMSIMDMKVSNLFEEETPQIFTLCGRGPRSSLRIMRTGLAVSEM--AVSKL 461
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
GI + WTV+ V D + S++V+SF T VL +G +V++S GF +LA L+
Sbjct: 462 PGIPSAVWTVKKNVMDEFDSYIVVSFTNATLVLSIGETVEEVSNS-GFLDTAPSLAVSLI 520
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP--EHVSISLGAVAHNMIIVST 635
D ++Q+H N +R + G W + +G+ ++I
Sbjct: 521 GDDSIMQVHPNGIR-----HIREDG-------RTNEWQTSGKRTIAKVGSNRLQVVIALN 568
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
F + V ++ E++ + +++C+ I +P+
Sbjct: 569 GGELVYFEVDVTG------QLMEVEKHEMSGDVACLDI-----------APV-------- 603
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI------VLTNTMGTAISGC 749
P G + +G++ ++ +LS P + ++ L+ S+ +L + ++ G
Sbjct: 604 ---PKGRLRSRFLAVGSYDNTIRILSLDPDDCMQTLSIQSLSSAPESLLFLEVQASVGGE 660
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
D L ++ AGL++G+L R + +V + S + F
Sbjct: 661 DGADHPASL----FLSAGLQSGVLSR-------TVVDTVTGLLSDARSRF---------- 699
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
+G+ L P+ M+ LS RPWL +
Sbjct: 700 -----------------------LGLKAPKLFPIILGRKCAMLCLSSRPWLGYIHQGHFL 736
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ +A S +C +G++ V+ +L +
Sbjct: 737 LTPLSYETLEYAASFSSDQCLEGVVSVSGEALRI 770
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 56 SNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLL 115
+ ++V + +EL+ + G +QS+ VFGTI+ L+ +F +Q KD +
Sbjct: 30 TQEIVVARGKVLELLRPDKFGRIQSILSVQVFGTIRSLS------QFRLTGAQ---KDFI 80
Query: 116 VVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDR 175
VV SDSG++ L + + + F + Q G R G+ LA+D G + ++A E +
Sbjct: 81 VVGSDSGRIVILDYNKQKNVFDKIHQETFGKSGCRRIVPGQYLAIDPKGRAVMIAACEKK 140
Query: 176 LGLFSLSMSS 185
++ L+ S
Sbjct: 141 KLVYVLNRDS 150
>gi|342320507|gb|EGU12447.1| Pre-mRNA-splicing factor RSE1 [Rhodotorula glutinis ATCC 204091]
Length = 1212
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 185/455 (40%), Gaps = 99/455 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT---- 514
L ++++APILD V +Y E Q++A CG SLRI+R G+ + + + +
Sbjct: 409 LAIADEVESLAPILDAKVANYLGEDTPQIYAACGRGARSSLRILRQGLEVMEAVSSELPG 468
Query: 515 APIYQGITGTWTVRMKV--SDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTL 572
API WT +++ + Y ++++LSFV T VL +G +V+D+ GF TL
Sbjct: 469 API-----AVWTTKLRAEGASSYDAYIILSFVNGTLVLAIGDTIEEVSDT-GFISSAPTL 522
Query: 573 ACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMII 632
+ D L+QI+ +R L+ W +G A I+
Sbjct: 523 GVQQLGDDALLQIYPRGIRHI------------LADKRVNEW-------KVG--ARETIV 561
Query: 633 VSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSN 692
+T+N ++G+ + + ++E + + +L+ + ER+ + I +S
Sbjct: 562 CATTN-SRQVVIGLSTGELVYFE------LDMDGQLN------EFQERKPMGAEILALSI 608
Query: 693 SSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQ 752
+ V P G +G +V ++S P+ L L+ + S +
Sbjct: 609 AEV---PEGRQRTPYLAVGCADSTVRIISLDPENTLDSLS------LQALTAPPSSIVMA 659
Query: 753 DVRLVLADQF----YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
++ D++ +V GL NG+LLR + P++ + +T
Sbjct: 660 EITDASIDKYHATMFVNIGLNNGVLLR--------------TVLDPLTGSLGDTR----- 700
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
TR +G PV L + ++ALS RPWL R L
Sbjct: 701 ---------------------TRFLGSRPVKLARVPVQGSPAILALSSRPWLNYAYRGIL 739
Query: 869 AYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + F +A + CP+G++ + NSL +
Sbjct: 740 QFTPLIFDALDYAWSFSAELCPEGLIGIVGNSLRI 774
>gi|302837243|ref|XP_002950181.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
nagariensis]
gi|300264654|gb|EFJ48849.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
nagariensis]
Length = 1104
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI-YQGITGTW 525
++API+D V+D + + Q+ C G+ +GSLR++R+GI + R A + GI G W
Sbjct: 360 SLAPIVDFVVMDLERQGQGQLVMCSGIDSDGSLRVVRNGIGIN---RQATVELPGIKGVW 416
Query: 526 TVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSV---GFRPDVCTLACGLVADGLL 582
++R D Y +L+L+FV ETR+L LN + D GF TL CG +A L
Sbjct: 417 SLRSHYDDEYDKYLLLTFVGETRLL--ALNTEEELDEAELPGFDSGSQTLWCGNMATDHL 474
Query: 583 VQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPE-HVSISLGAVAHNMIIVSTSNPCFL 641
+Q ++VRL S + + W P +I + A + ++V+T +
Sbjct: 475 LQASGSSVRLVDTA----------SLQLVSEWRPAPGFAIHVAAGSPTQVVVATGGGHLV 524
Query: 642 FILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
++ VR E+ E+ ++ L SE++C+ +
Sbjct: 525 YLEVVRRPE-GVVEVVEISNVVLDSEVACVDV 555
>gi|91087281|ref|XP_975549.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270010588|gb|EFA07036.1| hypothetical protein TcasGA2_TC010010 [Tribolium castaneum]
Length = 1149
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 13/203 (6%)
Query: 401 GEFFMI--EIAFGSDGHKVHLS---ECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLK-- 453
G FM+ E+ DG+ V E L + + + +++ L +GD ++K
Sbjct: 278 GHLFMLFLEVDNRGDGNDVVKDLKVELLGEIATPECITYLDNGVLFIGSRLGDSQLVKLT 337
Query: 454 ----EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLE 509
E + N+APILDM VVD + + Q+ C G EGSLRIIR+GI ++
Sbjct: 338 TKPNESGSYVTVMESFTNLAPILDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIQ 397
Query: 510 KLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
+ + GI G W +++ Y + LVL+FV +TRVL + + TD GF D
Sbjct: 398 E--HASIDLPGIKGMWALQVASDGRYDNTLVLAFVGQTRVLSLNGEEVEETDIAGFASDQ 455
Query: 570 CTLACGLVADGLLVQIHQNAVRL 592
T CG V +VQI + RL
Sbjct: 456 QTFFCGNVIHEQIVQITPISARL 478
>gi|449546293|gb|EMD37262.1| hypothetical protein CERSUDRAFT_83017 [Ceriporiopsis subvermispora
B]
Length = 1213
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 188/450 (41%), Gaps = 90/450 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDY-HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
L +++++P++D V++ + Q+F CG P S R++R G+ +E+++ +
Sbjct: 409 LTLVDEMESLSPVVDSKVMNLLPNSDTPQIFTACGRGPRSSFRMLRHGLDVEEVVSSD-- 466
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT ++K DPY S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 467 LPGIPNAVWTTKLKEDDPYDSYIILSFVNGTLVLCIGETIEEVQDT-GFLSSAPTLAVQQ 525
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H + +R + + +P I+ +T+
Sbjct: 526 IGADALLQVHPHGIRHVLADKRVNEWRVPQG---------------------KTIVCATT 564
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
N + + +LS + +E+ L +L+ ++ +R+ S + +S + V
Sbjct: 565 NKRQVVV----ALSSAELVYFELD---LDGQLN------EYQDRKAMGSTVLALSIAEV- 610
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQ--DV 754
P G +G +V ++S P+ L +I L + CI D
Sbjct: 611 --PEGRQRTPYLAVGCEDQTVRIISLDPESTL-----DTISLQALTAPPSAICIADMLDA 663
Query: 755 RLVLADQ-FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATS 813
+ Q +V GL+NG+LLR + PI+ +T
Sbjct: 664 GINKTQQTTFVNIGLQNGVLLR--------------TVLDPINGQLTDTR---------- 699
Query: 814 SFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSI 873
TR +G P+ L+ + + ++ALS RPWL T ++ + +T +
Sbjct: 700 ----------------TRFLGTRPIKLIRVLVQRNPGILALSSRPWLNYTHQNLMHFTPL 743
Query: 874 SFQPSTHATPVCSVECPKGILFVAENSLNL 903
F+ +A + CP+G++ ++ + L +
Sbjct: 744 IFENLDYAWSFSAELCPEGLIGISGSVLRI 773
>gi|443707495|gb|ELU03057.1| hypothetical protein CAPTEDRAFT_148808 [Capitella teleta]
Length = 1084
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 177/466 (37%), Gaps = 101/466 (21%)
Query: 446 MGDGMVLK-----EENGRLVYT-SPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K +++G V N+ P++DM VVD + + Q+ C G EGSL
Sbjct: 273 LGDSQLVKLNVEADDSGSYVQVMETFTNLGPVVDMCVVDLERQGQGQLVTCSGGYKEGSL 332
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + GI G W +R+ S +VLSFV +TRVL + +
Sbjct: 333 RIIRNGIGIHE--HATIDLPGIKGMWPLRVD-SPTQDDMIVLSFVGQTRVLLLSGEEVEE 389
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEH 618
T+ GF D T CG VA L+QI +VRL P + + + W P
Sbjct: 390 TELGGFEADQQTFFCGNVAHSQLLQITAASVRLVDPR----------TKKLLSEWRPPSG 439
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
++S+ H ++ + S F L + + ++ E++C+ I +
Sbjct: 440 KNLSVAGCNHCQVVCAVSREVF-------CLDIQQGALILQGSTTMEHEVACVDITPLND 492
Query: 679 ERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVL 738
E S P L + + A ++ PS+E L + + G I
Sbjct: 493 E----SGPSQLCAVGLWTDISARIL---------QLPSLEQLH-------QEMLGGEI-- 530
Query: 739 TNTMGTAISGCIPQDVRLVLADQF-YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISA 797
IP+ + L + YVL L +G L F P + + S +
Sbjct: 531 -----------IPRSILLATFEGVNYVLCALGDGALFYFHLQPSTGVLSDRKKV------ 573
Query: 798 TFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDR 857
+G P L ++ A SDR
Sbjct: 574 ----------------------------------TLGTQPTVLRTFKSPGTTNVFACSDR 599
Query: 858 PWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
P ++ ++ H L +++++ + + P+ S P + + +L +
Sbjct: 600 PTVVYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANDCTLTI 645
>gi|390357128|ref|XP_001198237.2| PREDICTED: splicing factor 3B subunit 3-like [Strongylocentrotus
purpuratus]
Length = 949
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 174/454 (38%), Gaps = 105/454 (23%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
+++++PIL + D E Q++ CG P S+R++R G+ + ++ + +
Sbjct: 133 LESLSPILSCQIADLASEDTPQLYVACGRGPRSSMRVLRHGLEVSEMA-VSELPGNPNAV 191
Query: 525 WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
WTV+ K D Y +++++SFV T VL +G +VTDS GF TL+ L+ D L+Q
Sbjct: 192 WTVKKKSDDEYDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSSSLIGDDALLQ 250
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
I+ P + H I V P SI AV ++++ + ++
Sbjct: 251 IY--------PDGIRH---IRADKRVNEWKTPGKKSIVKCAVNQRQVVIALTGGEMVYF- 298
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
E+ ++ ER++ ++ + +S ++VP+ G
Sbjct: 299 ----------------------EMDPTGQLNEYTERKEMNADVKCMSLATVPS---GEQR 333
Query: 705 GYTFVIGTHRPSVEVLSF---------------VPKEGLRVLASGSIVLTNTMGTAISGC 749
+G +V V+S P E L ++ G G S
Sbjct: 334 ARFLAVGLDDNTVRVISLDQSDCLQPLSMQALPAPAEALCIIEMGGTEAREETGERGS-- 391
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
+ ++ GL+NG+LLR
Sbjct: 392 ---------SGGLFLNIGLQNGVLLRMVL------------------------------- 411
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
D + +L TR +G PV L ++ ++A+S R WL +
Sbjct: 412 ---------DSVTGDLSDTRTRYLGSRPVKLFRINMQGSEAVLAMSSRSWLSYWYQSRFH 462
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 463 LTPLSYETLEFASGFASEQCPEGIVAISTNTLRI 496
>gi|157128866|ref|XP_001655232.1| DNA repair protein xp-e [Aedes aegypti]
gi|108882187|gb|EAT46412.1| AAEL002407-PA [Aedes aegypti]
Length = 980
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+API+DM +VD + + QM C G EGSLRIIR+GI +++ GI G W
Sbjct: 355 NLAPIIDMCIVDLEKQGQGQMITCSGSYKEGSLRIIRNGIGIQE--HACIDLPGIKGMWA 412
Query: 527 VRMKVSD-PYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
+R+ + D PY + LVLSFV TR+L + + T+ GF D T C V G ++Q+
Sbjct: 413 LRVGIDDSPYDNTLVLSFVGHTRILTLSGEEVEETEIPGFLSDQQTFYCANVDFGQIIQV 472
Query: 586 HQNAVRL 592
RL
Sbjct: 473 TPTTARL 479
>gi|58383228|ref|XP_312466.2| AGAP002472-PA [Anopheles gambiae str. PEST]
gi|55242305|gb|EAA08181.2| AGAP002472-PA [Anopheles gambiae str. PEST]
Length = 1138
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+API+DM VVD + + QM C G EGSLRIIR+GI +++ GI G W
Sbjct: 355 NLAPIVDMCVVDLERQGQGQMITCSGSFKEGSLRIIRNGIGIQE--HACIDLPGIKGMWA 412
Query: 527 VRMKVSD-PYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
+R+ + D PY + L+LSFV TRVL + + + T+ G D T C V+ G ++Q+
Sbjct: 413 LRVGIDDSPYDNTLILSFVGHTRVLMLSGDEVEETEIAGILGDQQTFYCANVSHGQILQV 472
Query: 586 HQNAVRL 592
++ RL
Sbjct: 473 TPSSARL 479
>gi|157128864|ref|XP_001655231.1| DNA repair protein xp-e [Aedes aegypti]
gi|108882186|gb|EAT46411.1| AAEL002407-PB [Aedes aegypti]
Length = 1138
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+API+DM +VD + + QM C G EGSLRIIR+GI +++ GI G W
Sbjct: 355 NLAPIIDMCIVDLEKQGQGQMITCSGSYKEGSLRIIRNGIGIQE--HACIDLPGIKGMWA 412
Query: 527 VRMKVSD-PYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
+R+ + D PY + LVLSFV TR+L + + T+ GF D T C V G ++Q+
Sbjct: 413 LRVGIDDSPYDNTLVLSFVGHTRILTLSGEEVEETEIPGFLSDQQTFYCANVDFGQIIQV 472
Query: 586 HQNAVRL 592
RL
Sbjct: 473 TPTTARL 479
>gi|242010743|ref|XP_002426118.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
gi|212510165|gb|EEB13380.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
Length = 1148
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 8/169 (4%)
Query: 430 KALLWVEGRFLSAFVEMGDGMVLK-----EENGRLV-YTSPIQNIAPILDMSVVDYHDEK 483
+A+ +++ L GD ++K +ENG V N+APILDM VVD +
Sbjct: 314 EAITYLDNGVLFIGSRCGDSQLVKLNTSPDENGYYVTIMEAFTNLAPILDMVVVDLERQG 373
Query: 484 RDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSF 543
+ Q+ C G EGSLRIIR+GI +++ + GI G W +R + Y + +VL+F
Sbjct: 374 QGQLVTCSGAFKEGSLRIIRNGIGIQEHATIDLL--GIKGMWALRASLDSVYDNTIVLAF 431
Query: 544 VEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRL 592
V +TR+L + + T+ GF D + CG V + ++Q+ RL
Sbjct: 432 VGQTRILTLNGEEVEETEIPGFLSDQQSFYCGNVENNNMIQLTPTCARL 480
>gi|405970223|gb|EKC35151.1| Splicing factor 3B subunit 3 [Crassostrea gigas]
Length = 1217
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 179/452 (39%), Gaps = 89/452 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + +++PI + D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVQVDEMDSLSPITHCQIADLANEDTPQLYTLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D + +++++SFV T VL +G +VTDS GF TL+C
Sbjct: 454 GNPNAVWTVKKNIDDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCS--- 509
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
Q+ +A+ P + H I V P SI AV ++++ +
Sbjct: 510 -----QLGDDALVQIYPDGIRH---IRSDKRVNEWKTPGKKSIVKCAVNQRQVVIALTGG 561
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ E+ ++ ER++ SS + ++ VP
Sbjct: 562 ELVYF-----------------------EMDPTGQLNEYTERKEMSSEVVCMALGRVPV- 597
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGCIP 751
G +G +V ++S P + L L+ S S+ + GT
Sbjct: 598 --GEQRCRFLAVGLSDNTVRIISLDPSDCLSPLSMQALPEPSESLCIVEMGGTEAK---E 652
Query: 752 QDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAA 811
+ ++ GL+NG+LLR +N+ ++
Sbjct: 653 ETGEPGTVGGLFLNIGLQNGVLLRTVL------------------------DNVTGDLSD 688
Query: 812 TSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYT 871
T TR +G+ PV L +S ++A+S R WL T ++ T
Sbjct: 689 TR----------------TRYLGVRPVKLFRISMQGSEAVLAMSSRSWLSYTYQNRFHLT 732
Query: 872 SISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+S++ +A+ S +CP+GI+ ++ N+L +
Sbjct: 733 PLSYETLEYASGFASEQCPEGIVAISTNTLRI 764
>gi|170057515|ref|XP_001864517.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876915|gb|EDS40298.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1138
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 165/442 (37%), Gaps = 99/442 (22%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+API+DM +VD + + QM C G EGSLRIIR+GI +++ GI G W
Sbjct: 355 NLAPIIDMCIVDLERQGQGQMITCSGSYKEGSLRIIRNGIGIQE--HACIDLPGIKGMWA 412
Query: 527 VRMKVSD-PYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
+R+ + D PY + LVLSFV TR+L + + T+ GF D T C V G ++Q+
Sbjct: 413 LRVGIDDSPYDNTLVLSFVGHTRILMLSGEEVEETEIPGFLSDQQTFYCANVDFGQIIQV 472
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILG 645
RL + + W P +G VA N C +
Sbjct: 473 TPMTARLISCD----------NKSMICEWKPPD-DKRIGVVA--------CNSCQMVCAT 513
Query: 646 VRSLSVSHYEIYEMQH---MRLQSELSCISI-PQKHPERRKSSSPISLVSNSSVPALPAG 701
R + E ++ H + L E++C+ I P P R + L + S L
Sbjct: 514 ARDIYYIEIEAGKLVHKSTVTLDYEVACLDISPLDEPATRSELVAVGLWTEISACIL--- 570
Query: 702 VIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQ 761
P++E FV KE L G I+ + + G I
Sbjct: 571 -----------RLPNLE---FVHKEKL----GGEIIPRSILMACFEGII----------- 601
Query: 762 FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDEL 821
Y+L L +G + F + ++ D+
Sbjct: 602 -YLLCALGDGSMFYF--------------------------------VVDKTTHRLTDQK 628
Query: 822 PINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHA 881
+ L G P L ++ A SDRP ++ ++ H L +++++ + H
Sbjct: 629 KVTL--------GTQPTILKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHM 680
Query: 882 TPVCSVECPKGILFVAENSLNL 903
+ + + +NS+ L
Sbjct: 681 CSLNAESYQDSLALATKNSVIL 702
>gi|449488592|ref|XP_004158102.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
[Cucumis sativus]
Length = 570
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D VVD + + Q+ C G +GSLR++R+GI + + + + QGI G W+
Sbjct: 347 NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRVVRNGIGINE--QASVELQGIKGMWS 404
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
+R DP+ +FLV+SF+ ETR+L + L + + T+ GF V TL C LVQ+
Sbjct: 405 LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFNSQVQTLFCHDALFNQLVQV 464
Query: 586 HQNAVRLCMPT 596
++VRL T
Sbjct: 465 TSSSVRLVSST 475
>gi|328874742|gb|EGG23107.1| UV-damaged DNA binding protein1 [Dictyostelium fasciculatum]
Length = 1116
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI D +VD + ++Q+ AC G EGSLR+IR+GI + + + + GI W+
Sbjct: 342 NLGPIPDFCLVDIEKQGQNQIVACSGGFKEGSLRVIRNGIGITE--QASIDLPGIKAIWS 399
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
+ + SD Y L+LSF+ T+VL + T+ GF TL CG VAD ++QI
Sbjct: 400 L-ARGSDRY---LILSFISSTKVLEFQGEDIEETEIAGFDLQSPTLYCGNVADKQILQIS 455
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGV 646
+ + L V H L+Y V W P SI+L + N I++S F
Sbjct: 456 TSGIYL-----VDHE--TNLNYDV---WKPSSGSINLASHQGNQILISFGKTLIYF---- 501
Query: 647 RSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
+ +I +++ + ++ E+SC+ I R + L ++ S+ L
Sbjct: 502 ---EIKDQKIIKLKELEMEFEISCLDISSFQVGERSKICVVGLWTDISLRIL 550
>gi|321478515|gb|EFX89472.1| hypothetical protein DAPPUDRAFT_303245 [Daphnia pulex]
Length = 1158
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 185/488 (37%), Gaps = 99/488 (20%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYH 480
P C L +++ + GD ++K + N + N+API+DM++VD
Sbjct: 311 PEC--LTYLDNGVVFIGSRFGDSQLVKLNVTPDDNNSYVTVMETFTNLAPIVDMTIVDLD 368
Query: 481 DEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSD--PYHSF 538
+ + Q+ C G EGSLRIIR+GI + + + + GI G W ++M S
Sbjct: 369 RQGQGQLVTCSGAYKEGSLRIIRNGIGIHE--QASIDLPGIKGIWALKMGSSGNPSVDDT 426
Query: 539 LVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMV 598
+VLSFV +TRVL + + T+ G D T CG V ++QI +VRL
Sbjct: 427 VVLSFVGQTRVLMLNGEEMEETEIPGLTADQQTFFCGNVGKDSVLQITTGSVRLISVN-- 484
Query: 599 AHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIY 657
+ + W P+ +++ A H ++ + + + ++
Sbjct: 485 --------TKQKLSEWTPPDGKMLNVVACNHGQVLCAAGRELYYLEME------DDTQVV 530
Query: 658 EMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGV-IIGYTFVIGTHRPS 716
H+ L E++C+ + +PIS+ S + A V +G I
Sbjct: 531 LKTHVTLDYEVACLDL-----------TPISIGSQQNTTVSKAEVCAVGLWTDISARLLK 579
Query: 717 VEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQF-YVLAGLRNGMLLR 775
+ L KE L G I IP+ + + L + Y+L L +G L
Sbjct: 580 LPTLEEFHKEPL----GGEI-------------IPRSILMALFEGTPYLLVALGDGSLFY 622
Query: 776 FEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGI 835
F P T + ++ + Q
Sbjct: 623 FSMNP------------------------------VTKLLGDRKKVTLGTQ--------- 643
Query: 836 TPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILF 895
P L P ++ A SDRP ++ ++ H L +++++ + H P+ S P ++
Sbjct: 644 -PTVLRPFRSQSTVNVFACSDRPTVIYSSNHKLVFSNVNLKEVAHMCPLNSEAYPDSLVL 702
Query: 896 VAENSLNL 903
+ ++ +
Sbjct: 703 ATDTAVTI 710
>gi|403411971|emb|CCL98671.1| predicted protein [Fibroporia radiculosa]
Length = 1212
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/455 (20%), Positives = 185/455 (40%), Gaps = 100/455 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDY-HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
L +++++P+LD V++ + Q+FA CG + R++R G+ +E+++ +
Sbjct: 408 LTLVDEMESLSPVLDAKVMNLLPNSDTPQVFAACGRGGRSTFRMLRHGLEVEEVVSSD-- 465
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT ++K DPY S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 466 LPGIPNAVWTTKLKEDDPYDSYIILSFVNGTLVLCIGETIEEVQDT-GFLSSAPTLAVQQ 524
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVST 635
+ L+Q+H + +R LS W P+ +I ++V+
Sbjct: 525 IGYDALLQVHPHGIRHV------------LSDKRVNEWRVPQGKTIVAATTNKRQVVVAL 572
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
S+ ++ + L +L+ ++ +R+ S + + S+
Sbjct: 573 SSAELVYF-----------------ELDLDGQLN------EYQDRKAMGSTVLAL---SI 606
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISG 748
+P G +G +V ++S P+ L ++ +I + + + I+
Sbjct: 607 AEVPEGRQRTPYLAVGCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADMLDAGINK 666
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
P +V GL+NG+LLR + P++ +T
Sbjct: 667 TQPTS---------FVNIGLQNGVLLR--------------TVLDPVNGQLTDTR----- 698
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
TR +G P+ L+ + + ++ALS R WL T ++ +
Sbjct: 699 ---------------------TRFLGTRPIKLIRVLVQRNPGILALSSRSWLNYTYQNLM 737
Query: 869 AYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + F+ +A + CP+G++ ++ + L +
Sbjct: 738 HFTPLIFENLDYAWSFSAELCPEGLIGISGSVLRI 772
>gi|395333071|gb|EJF65449.1| hypothetical protein DICSQDRAFT_178021 [Dichomitus squalens
LYAD-421 SS1]
Length = 1213
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 188/454 (41%), Gaps = 98/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDY-HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
L ++++ PILD V++ + Q+FA CG + R +R G+ +E+++ +
Sbjct: 409 LTLVDELESLCPILDSKVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEEVVSSD-- 466
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT ++K DPY S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 467 LPGIPNAVWTTKLKEDDPYDSYIILSFVNGTLVLCIGETIEEVQDT-GFLSSAPTLAVQQ 525
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H + +R + + +P + I+ +T+
Sbjct: 526 IGADALLQVHPHGIRHVLSDRRVNEWRVP---------------------SGKTIVCATT 564
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
N + + +LS + +E+ L +L+ ++ +R+ S + + S+
Sbjct: 565 NKRQVVV----ALSSAELVYFELD---LDGQLN------EYQDRKAMGSTVLAL---SIA 608
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGC 749
+P G +G +V ++S P+ L ++ +I + + + I+
Sbjct: 609 EVPEGRQRTPYLAVGCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADMLDAGINKT 668
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
P +V GL+NG+LLR + P++ +T
Sbjct: 669 QPTT---------FVNIGLQNGVLLR--------------TVLDPVNGQLTDTR------ 699
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
TR +G P+ L+ ++ + ++ALS RPWL T ++ +
Sbjct: 700 --------------------TRFLGTRPIRLLRVNIQRNPAILALSSRPWLNYTHQNFMH 739
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + F+ +A + C +G++ ++ + L +
Sbjct: 740 FTPLIFENLDYAWSFSAELCQEGLIGISGSLLRI 773
>gi|328717412|ref|XP_003246201.1| PREDICTED: splicing factor 3B subunit 3-like [Acyrthosiphon pisum]
Length = 1218
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 191/477 (40%), Gaps = 90/477 (18%)
Query: 436 EGRFLSAF-VEMGDGMVLKEENGR-LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
E F SA +E GD R LV + +++PI+ V D E Q++ CG
Sbjct: 370 EPEFSSAMPLEEGDTFFFAPRQLRNLVLVDEMDSLSPIMACQVADLAAEDTPQLYMACGR 429
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
+LR++R G+ + ++ + + WTV+ + + + +++++SF T VL +G
Sbjct: 430 GSRSTLRVLRHGLEVSEMA-VSELPGSPNAVWTVKRRADENFDAYIIVSFSNATLVLSIG 488
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
+V+DS GF TL+C + D +VQI+ N VR H
Sbjct: 489 ETVEEVSDS-GFLGTTPTLSCSPLGDDAVVQIYPNGVRHIRSDKRMH------------D 535
Query: 614 W-FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCIS 672
W PE I A ++++ LG L ++E+ H+
Sbjct: 536 WKAPEKKKIVKCAANQRQVVIA---------LGGGEL--VYFEMDPTGHL---------- 574
Query: 673 IPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA 732
+H +R++ +S + ++ ++ P+G + +G +V ++S + L L
Sbjct: 575 --NEHKDRKEMNSDVLCMALANA---PSGEQMSRFLAVGLTDETVRIISLDTTDCLVQLK 629
Query: 733 SGSI------VLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPS 786
+I + MG + G + L+ Y+ GL+NG+LLR
Sbjct: 630 MQAIPAMPESLCIVEMGASDGGSSDEPAMNSLS-MLYLNIGLQNGVLLR----------- 677
Query: 787 SVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDS 846
+ G+ E D R +G PV L +
Sbjct: 678 -----------------TVLDGVTG----EMAD--------TRARYLGGKPVKLFKIRTR 708
Query: 847 LDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ ++A+S R WL ++ T +S++ +A+ S +CP+GI+ ++ N+L +
Sbjct: 709 GNEAVLAMSSRSWLSYYYQNRFHLTPLSYESLEYASGFSSEQCPEGIVAISGNTLRI 765
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L +GS + HG+ +++ + S+EL+ + G V ++ VFG
Sbjct: 2 YLYNMTLQRGSGITHAIHGNFSGGKVQEILVSRGKSLELMRPDPNTGKVHTLLTVEVFGI 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ A++ + + KD +VV SDSG++ L + + V Q G
Sbjct: 62 IR--ALMSFRQSGGT-------KDYIVVGSDSGRIVILEYLPSKNVLDKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDR 175
R G+ LA+D G I + A E +
Sbjct: 113 RRIVPGQYLAIDPKGRAIMIGAVEKQ 138
>gi|427788481|gb|JAA59692.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
Length = 1156
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 184/478 (38%), Gaps = 114/478 (23%)
Query: 446 MGDGMVLK---EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E N + + ++ N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 328 LGDSQLIKLHAERNDQGSFVEIMEVFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 387
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRM---------KVSDPYHS-----FLVLSFVE 545
RIIR+GI + + + GI G W +R+ DP S LVLSFV
Sbjct: 388 RIIRNGIGIHE--HASIDLPGIKGMWPLRVGPGVAPHGGDGRDPGDSAERDNTLVLSFVR 445
Query: 546 ETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIP 605
+TRVL + + T+ GF T CG V + L+Q+ AVRL
Sbjct: 446 QTRVLMLSGEEVEETELAGFDTSQQTFFCGNVRNKQLIQVTAAAVRLVDSQ--------- 496
Query: 606 LSYPVCTSWFPEHV-SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRL 664
+ + W P +IS+ + ++ + F +G L+ ++ + L
Sbjct: 497 -TKQLLNEWKPPGARNISVVTCNQSQVVCAVRKEVFCLEIGDGVLN-------QISNAEL 548
Query: 665 QSELSCISI-PQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFV 723
++E++C+ I P + + + L ++ S+ L PS++ L
Sbjct: 549 ENEVACLDITPLSEKAEKATLCAVGLWTDISIRILSL--------------PSLQQLQ-- 592
Query: 724 PKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSN 783
KE + G I+ + + T G Y+L L +G L F
Sbjct: 593 -KENI----GGEIIPRSILITTFEGI------------HYLLCALGDGSLFYFLLE---- 631
Query: 784 IPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPL 843
A T + + ++ +G P L
Sbjct: 632 --------------------------ATTGALTDRKKVT----------LGTQPTVLKTF 655
Query: 844 SDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSL 901
+++ A SDRP ++ ++ H L +++++ + H P+ S P + +N+L
Sbjct: 656 KSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCPLNSEGYPDSLALANDNTL 713
>gi|409045147|gb|EKM54628.1| hypothetical protein PHACADRAFT_210427 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1213
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 185/454 (40%), Gaps = 98/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDY-HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
L ++++ P++D V++ + Q+FA CG SLR++R G+ +E+++ +
Sbjct: 409 LTLVDELESLDPVVDAKVLNLLPNSDSPQIFAACGRGGRSSLRMLRHGLEVEEVVSSD-- 466
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT +++ DP+ S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 467 LPGIPNAVWTTKLREDDPFDSYIILSFVNGTLVLSIGETIEEVQDT-GFLSSSPTLAVQQ 525
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H + +R + + V P+ +I ++V+ S
Sbjct: 526 LGADALLQVHPHGIRHVL-----------VDRRVNEWRVPQGKTIVCATTNRRQVVVALS 574
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
+ ++ + L+ +L+ ++ ER+ S + + SV
Sbjct: 575 SAELVYF-----------------ELDLEGQLN------EYQERKAMGSTVLAL---SVG 608
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGC 749
+P G +G +V ++S P+ L ++ +I + + + I+
Sbjct: 609 EVPEGRQRTPFLAVGCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADMLDAGINKV 668
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
P +V GL+NG+LLR + PI+ +T
Sbjct: 669 QPTT---------FVNIGLQNGVLLR--------------TVLDPINGQLTDTR------ 699
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
TR +G P+ LV + + ++ALS R WL T ++ +
Sbjct: 700 --------------------TRFLGTRPIKLVRVQIQRNPGILALSSRSWLNYTHQNLMH 739
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + F +A + CP+G++ ++ + L +
Sbjct: 740 FTPLIFDNLDYAWSFSAELCPEGLIGISGSVLRI 773
>gi|412992547|emb|CCO18527.1| predicted protein [Bathycoccus prasinos]
Length = 1275
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 22/212 (10%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D V+D + Q+ C GV GSLR+IR+GI + + + + GI G ++
Sbjct: 497 NLGPIVDFCVMDLERHGQGQLVTCSGVGTSGSLRVIRNGIGIREQAQIS--LSGIKGLYS 554
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSV--GFRPDVCTLACGLVADGLLVQ 584
+ + P S+L++SF+ ETR+L + N ++ ++V GF T+ C ++ ++ Q
Sbjct: 555 CKRDETMPLDSYLIVSFIAETRILAINDN-DELEEAVFPGFDASSQTIECANISGNVICQ 613
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVS-ISLGAVAHNMIIVSTSNPCFLFI 643
+ V +C + S + SW P S I+ + + N I V+T +
Sbjct: 614 VTSKGVYVCDAS----------SGELVASWVPSDESPITASSASENTIAVATVGGNLHY- 662
Query: 644 LGVRSLSVSHYEIYEMQHMRLQSELSCISIPQ 675
LS +I E M +E+SCI Q
Sbjct: 663 -----LSFQGGKISETGKMTFDAEISCIDKTQ 689
>gi|336371417|gb|EGN99756.1| hypothetical protein SERLA73DRAFT_88390 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384183|gb|EGO25331.1| hypothetical protein SERLADRAFT_355643 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1216
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 180/455 (39%), Gaps = 100/455 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVD-YHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
L ++++ PILD V++ + Q+FA CG SLR++R G+ +E+ + +
Sbjct: 409 LALADEMESLDPILDSKVMNILPNSDTPQIFAACGRGARSSLRMLRHGLDVEESVSSE-- 466
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT + K DP+ S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 467 LPGIPNAVWTTKRKEDDPFDSYIILSFVNGTLVLSIGETIEEVQDT-GFLSSAPTLAVQQ 525
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVST 635
+ L+Q+H +R L+ W P+ +I A ++V+
Sbjct: 526 IGADALLQVHPQGIRHV------------LADRRVNEWRVPQGKTIVSAATNKRQVVVAL 573
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
S+ ++ EL ++ +R+ S + + SV
Sbjct: 574 SSAELVYF-----------------------ELDLDGQLNEYQDRKAMGSTVLAL---SV 607
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISG 748
+P G +G +V ++S P+ L ++ +I + + + +I+
Sbjct: 608 GEVPEGRQRTPYLAVGCEDQTVRIISLDPESTLETISLQALTAPPSAICIADMLDASINK 667
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
P +V GL+NG+LLR + PI+ +T
Sbjct: 668 TQP---------TMFVNIGLQNGVLLR--------------TVLDPINGQLTDTR----- 699
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
TR +G P+ LV + + ++ALS R WL T ++ +
Sbjct: 700 ---------------------TRFLGTRPIRLVRVQIHGNPAILALSSRSWLNYTHQNLM 738
Query: 869 AYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + F+ +A + P+G++ +A + L +
Sbjct: 739 HFTPLIFENLDYAWSFSAELSPEGLIGIAGSVLRI 773
>gi|147787360|emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
Length = 1143
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++ PI+DM V + +E+ Q+FA CG P S+RI+R G+++ ++ +
Sbjct: 375 LVRIDQVESLMPIMDMKVSNLFEEETPQIFALCGRGPRSSIRILRPGLAISEMAVSQ--L 432
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WTV+ V+D + +++V+SF T VL +G +V+DS GF +LA L+
Sbjct: 433 PGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 491
Query: 578 ADGLLVQIHQNAVR 591
D L+Q+H + +R
Sbjct: 492 GDDSLMQVHPSGIR 505
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 72 IGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCN 131
+ E+G +Q++ +FG I+ LA +F SQ KD +VV SDSG++ L +
Sbjct: 25 LNENGKIQTILSVEIFGAIRSLA------QFRLTGSQ---KDYIVVGSDSGRIVILEYNK 75
Query: 132 EMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
E + F + Q G R G+ LA+D G + + A E + ++ L+ +
Sbjct: 76 EKNVFDKIHQETFGKSGCRRIVPGQYLAIDPKGRAVMIGACEKQKLVYVLNRDT 129
>gi|427780151|gb|JAA55527.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
Length = 1181
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 184/478 (38%), Gaps = 114/478 (23%)
Query: 446 MGDGMVLK---EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E N + + ++ N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 353 LGDSQLIKLHAERNDQGSFVEIMEVFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 412
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRM---------KVSDPYHS-----FLVLSFVE 545
RIIR+GI + + + GI G W +R+ DP S LVLSFV
Sbjct: 413 RIIRNGIGIHE--HASIDLPGIKGMWPLRVGPGVAPHGGDGRDPGDSAERDNTLVLSFVR 470
Query: 546 ETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIP 605
+TRVL + + T+ GF T CG V + L+Q+ AVRL
Sbjct: 471 QTRVLMLSGEEVEETELAGFDTSQQTFFCGNVRNKQLIQVTAAAVRLVDSQ--------- 521
Query: 606 LSYPVCTSWFPEHV-SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRL 664
+ + W P +IS+ + ++ + F +G L+ ++ + L
Sbjct: 522 -TKQLLNEWKPPGARNISVVTCNQSQVVCAVRKEVFCLEIGDGVLN-------QISNAEL 573
Query: 665 QSELSCISI-PQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFV 723
++E++C+ I P + + + L ++ S+ L PS++ L
Sbjct: 574 ENEVACLDITPLSEKAEKATLCAVGLWTDISIRILSL--------------PSLQQLQ-- 617
Query: 724 PKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSN 783
KE + G I+ + + T G Y+L L +G L F
Sbjct: 618 -KENI----GGEIIPRSILITTFEGI------------HYLLCALGDGSLFYFLLE---- 656
Query: 784 IPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPL 843
A T + + ++ +G P L
Sbjct: 657 --------------------------ATTGALTDRKKVT----------LGTQPTVLKTF 680
Query: 844 SDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSL 901
+++ A SDRP ++ ++ H L +++++ + H P+ S P + +N+L
Sbjct: 681 KSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCPLNSEGYPDSLALANDNTL 738
>gi|296086939|emb|CBI33172.3| unnamed protein product [Vitis vinifera]
Length = 934
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++ PI+DM V + +E+ Q+FA CG P S+RI+R G+++ ++ +
Sbjct: 254 LVRIDQVESLMPIMDMKVSNLFEEETPQIFALCGRGPRSSIRILRPGLAISEMAVSQ--L 311
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WTV+ V+D + +++V+SF T VL +G +V+DS GF +LA L+
Sbjct: 312 PGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDS-GFLDTTPSLAVSLI 370
Query: 578 ADGLLVQIHQNAVR 591
D L+Q+H + +R
Sbjct: 371 GDDSLMQVHPSGIR 384
>gi|17508021|ref|NP_491953.1| Protein TEG-4 [Caenorhabditis elegans]
gi|351060889|emb|CCD68627.1| Protein TEG-4 [Caenorhabditis elegans]
Length = 1220
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/519 (20%), Positives = 196/519 (37%), Gaps = 104/519 (20%)
Query: 392 PKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSA--FVEMGDG 449
P C+ F + FG+ H+++ L +G + F SA F E
Sbjct: 336 PANALCILKSGFLFVAAEFGN--HELYQIASLGEGD--------DDEFSSAMGFGENDAA 385
Query: 450 MVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLE 509
E L+ + +++P+ D + D E Q+++ G SL+++R+G+ +
Sbjct: 386 FFEPHELKSLIPIDSMDSLSPLTDAVIGDIAREDAAQIYSLVGRGARSSLKVLRNGLEIS 445
Query: 510 KLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
++ + + WTV+ + D Y S++V+SFV T L +G + +DS GF P
Sbjct: 446 EMA-VSDLPGNPNAVWTVKKNIEDQYDSYIVVSFVNATLALTIGDTVEEASDS-GFLPTT 503
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHN 629
T+ C ++ D LVQI+ +R I + P I AV
Sbjct: 504 PTIGCAMIGDDSLVQIYSEGIR-----------HIRADKRINEWKAPPRRQIVKCAVNRR 552
Query: 630 MIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISL 689
+ V+ + ++ EL + ER+ ++ I+
Sbjct: 553 QVAVALTGGELVYF-----------------------ELDLNGTLNEFTERKLFNADIAC 589
Query: 690 VSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGC 749
++ S + G + +GT +V ++S P + L L++ S+ C
Sbjct: 590 MTFSEI---SEGELNSRFLALGTVDNAVRIISLDPNDMLMPLSTQSL-----------PC 635
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISAT----FRNT-EN 804
P+ + L+ + P + VA +H I FRNT +N
Sbjct: 636 PPESILLI-------------------DTPNEDG--KGVAAVHLNIGLQNGCLFRNTVDN 674
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA 864
+ I T TR +G PV L + + ++ S R WLL
Sbjct: 675 VTGAIMDTR----------------TRYLGTRPVKLFKVQCQGRSAILCTSSRSWLLYHF 718
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ T +S+ +A CS +C +GI+ ++ ++L +
Sbjct: 719 QRRFHLTPLSYANLEYAASFCSNQCSEGIVAISASTLRI 757
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 32 YLAKCVLKG-SVVLQVAHGHLR-SPTSNDVVFGKETSIELVIIGE-DGIVQSVCEQAVFG 88
+L L+G S + Q G+ +P + ++V G+ +++EL+ + G ++ +C Q +FG
Sbjct: 2 HLYNLTLQGQSAINQAIQGNFSGTPKAQEIVVGRGSALELLTLDTVTGKIKVMCHQDIFG 61
Query: 89 TIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
++ L + A +D + V SDSG++ L + E F + Q G
Sbjct: 62 IVRSLLAF----RLTAGT-----RDFIAVGSDSGRIVILQYNAEKTCFERLHQETFGKTG 112
Query: 149 NSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
R G L D G + + A E + ++ ++ S
Sbjct: 113 CRRIVPGHFLVGDPRGRALMIGAVERQKLVYIMNRDS 149
>gi|195449948|ref|XP_002072297.1| GK22405 [Drosophila willistoni]
gi|194168382|gb|EDW83283.1| GK22405 [Drosophila willistoni]
Length = 1140
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 193/485 (39%), Gaps = 102/485 (21%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMV--LKEENGRLVYTSPIQN---IAPILDMSVVDYHD 481
P C + +++ FL GD + L E Y P++N +APILD++VVD
Sbjct: 310 PEC--ITYLDNGFLYIGARHGDSQLVRLSSEAIEGSYVIPVENFTNLAPILDIAVVDLDR 367
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSD-PYHSFLV 540
+ + Q+ C G +GSLRIIR GI +++ GI G W++++ D PY + LV
Sbjct: 368 QGQGQIITCSGSFKDGSLRIIRIGIGIQE--HACIDLPGIKGMWSLKVGTDDSPYENTLV 425
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
L+FV TR+L + + T+ GF D+ T C V L+Q+ ++VRL +
Sbjct: 426 LAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCANVEHDQLIQVTSDSVRLVKSS---- 481
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHN--MIIVSTSNPCFLFILGVRSLSVSHYEIYE 658
S + W PE S+G V+ N I+V+++ F ++ +L E
Sbjct: 482 ------SKSLVAEWRPEG-DRSIGVVSCNGTQIVVASARDIFYIVIEDGNLQ-------E 527
Query: 659 MQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVE 718
L E++C+ I ++ KS V +G I S+
Sbjct: 528 KCRKTLAYEVACLDITPLDEKQNKSEL----------------VAVGLWTDISAVMLSLP 571
Query: 719 VLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEW 778
L + E L SG I+ + + T G Y+L L +G + F
Sbjct: 572 SLDTIYTEKL----SGEIIPRSILMTTFEGI------------HYLLCALGDGSMYYF-- 613
Query: 779 PPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPV 838
I PI+ + + + G T+ L R T V
Sbjct: 614 ------------IMDPITGQLTDKKKVTLGTQPTT-------------LRTFRSFATTNV 648
Query: 839 FLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAE 898
F A SDRP ++ ++ H L +++++ + H + + P + +
Sbjct: 649 F-------------ACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATK 695
Query: 899 NSLNL 903
NS+ L
Sbjct: 696 NSVIL 700
>gi|198432469|ref|XP_002129207.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
DNA-binding protein 1) (UV-damaged DNA-binding factor)
(DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
(UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
pigmentosum group E-co... isoform 1 [Ciona intestinalis]
Length = 1150
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 176/439 (40%), Gaps = 90/439 (20%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+DM VVD + + Q+ C G EGSLRIIR+GI +++ + GI G W
Sbjct: 358 NLGPIIDMCVVDLDRQGQGQVVTCSGAFKEGSLRIIRNGIGIQE--HASIDLPGIKGLWP 415
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
+R+ + + LV+SFV +R+L++ + TD GF + T C V LVQI
Sbjct: 416 LRVFDTSRSYDTLVISFVGHSRILQLSGEEVEETDLPGFDDESQTFYCSNVCHNQLVQIT 475
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWFPE---HVSISLGAVAHNMIIVSTSNPCFLFI 643
+ ++RL ++H+ W P+ H+S++ + ++ + +S F
Sbjct: 476 EKSIRL-----ISHT-----ERRQVHEWKPKNDRHISVATCNKSQVLLAIGSSLHYFEIQ 525
Query: 644 LGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVI 703
G E+ E + L E++C++I LVS+ S +
Sbjct: 526 PG---------EVIERACVDLPHEVACLTIE-------------PLVSDPS-------EL 556
Query: 704 IGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQF- 762
G FV S+ + RVL ++ + A IP+ + LV D
Sbjct: 557 EGPDFVTA----SICAVGLWNDNTARVLKLPTLEEMHQQKLA-DEIIPRSILLVQFDGIN 611
Query: 763 YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELP 822
Y+L L +G L F P+ T + ++P
Sbjct: 612 YLLVTLGDGTLFYFTLNPE------------------------------TGYISDRKKVP 641
Query: 823 INLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHAT 882
+G P L + + A SDRP ++ ++ L +++++ + +H
Sbjct: 642 ----------LGTQPTSLSVFTSGGSRTVFACSDRPTVVYSSNKKLVFSNVNLKEVSHMC 691
Query: 883 PVCSVECPKGILFVAENSL 901
P+ S P + +N+L
Sbjct: 692 PLDSDGYPDSLALANDNTL 710
>gi|358060450|dbj|GAA93855.1| hypothetical protein E5Q_00501 [Mixia osmundae IAM 14324]
Length = 1153
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/461 (21%), Positives = 185/461 (40%), Gaps = 112/461 (24%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + ++ PI+D V + Q+ CG SL+++R G+ +E+++ + +
Sbjct: 353 LVLVDELDSLCPIVDAKVANVLGADAPQIITACGRGHRSSLKMLRHGLEVEEMVSSGLGF 412
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ TG WT ++K D Y S++VLS T VL +G + ++S G + TL V
Sbjct: 413 EP-TGLWTTKLKSDDTYDSYIVLSAPAATIVLTIGESIEQASNS-GLVENQRTLCVQQVG 470
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D +VQ+H + + G +P+ PE V++++ I+++T++
Sbjct: 471 DDSIVQVHPAGF------LRVRADGSKEVWPLA----PERVNLAVACANQRQIVLATTSG 520
Query: 639 CFLFI----------------LGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRK 682
+++ LGV SV+ I E+ RLQ++ C+ +
Sbjct: 521 DIIYLRCELDGEITVFDDRKQLGV---SVTSMSIGELSEDRLQTDYLCVGCED------Q 571
Query: 683 SSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTM 742
+ ISL + + + S++ L+ +P SI + +
Sbjct: 572 TVRIISLQEQNCLETI-----------------SIQALTALPS---------SICIAEIL 605
Query: 743 GTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNT 802
+++ P +V GL+NG+LLR + P+S +T
Sbjct: 606 DSSVDKTRPTT---------FVNIGLQNGVLLR--------------TVLDPMSGRLTDT 642
Query: 803 ENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQ 862
TR +G PV L L+ + ++++S R W+
Sbjct: 643 R--------------------------TRFLGTRPVKLRRLAIGDSSGVLSISSRTWVNY 676
Query: 863 TARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T + L + + P HAT + + CP+GI+ V ++L +
Sbjct: 677 THQGLLQFDPLISDPLDHATGLRAEVCPEGIIGVTGDTLRI 717
>gi|357623954|gb|EHJ74904.1| putative DNA repair protein xp-e [Danaus plexippus]
Length = 1128
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 180/447 (40%), Gaps = 99/447 (22%)
Query: 461 YTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
Y P++ ++API+DM VVD + ++Q+ C G GSLRIIR+GI +++ + +
Sbjct: 345 YVQPMETFTSLAPIVDMCVVDLERQGQNQLITCSGAFKMGSLRIIRNGIGIQE--QASID 402
Query: 518 YQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
GI G W + + P+H LVLSFV +TRVL + + T+ GF D T G V
Sbjct: 403 LPGIKGMWALTLG-QGPHHDTLVLSFVGQTRVLTLNGEEVEETEIKGFVSDRQTFFTGNV 461
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSN 637
L+Q+ +RL G P + +W P ++S+ + + +
Sbjct: 462 CHDQLIQVTDEGIRLI--------GRGPGGWNGVAAWAPAGRAVSVVSCGETRAVAAAGL 513
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
+L + +L + + + + E++C+ + P ++ + L ++ SV
Sbjct: 514 RIYLVAIKQGALEL-------ISEVCMNEEVACLDLG---PGGEEALLGVGLWTDISVRV 563
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRL- 756
L + RP + E L SG I IP+ + +
Sbjct: 564 LK----------LPDLRP-------LHTEKL----SGEI-------------IPRSLLIC 589
Query: 757 VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFE 816
VL Y+L L +G + F PDS + N + + G T
Sbjct: 590 VLEGVCYLLCALGDGSMFYFTVDPDSGV--------------LTNKKKVTLGTQPTV--- 632
Query: 817 SKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQ 876
L + R + T +F A SDRP ++ ++ H L +++++ +
Sbjct: 633 ----------LRSFRSLSTTNIF-------------ACSDRPTVIFSSNHKLVFSNVNLK 669
Query: 877 PSTHATPVCSVECPKGILFVAENSLNL 903
H + +V P + ++++ +
Sbjct: 670 EVAHMCSLNAVAYPDSLALATDSTVTI 696
>gi|198432471|ref|XP_002129229.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
DNA-binding protein 1) (UV-damaged DNA-binding factor)
(DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
(UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
pigmentosum group E-co... isoform 2 [Ciona intestinalis]
Length = 1142
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/471 (22%), Positives = 187/471 (39%), Gaps = 107/471 (22%)
Query: 446 MGDGMVLKEENGRLVYTSPIQ-----------NIAPILDMSVVDYHDEKRDQMFACCGVA 494
+GD +++ ++T+P++ N+ PI+DM VVD + + Q+ C G
Sbjct: 328 LGDSQLIR------LHTTPVEVHLISVLDTYTNLGPIIDMCVVDLDRQGQGQVVTCSGAF 381
Query: 495 PEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGL 554
EGSLRIIR+GI +++ + GI G W +R+ + + LV+SFV +R+L++
Sbjct: 382 KEGSLRIIRNGIGIQE--HASIDLPGIKGLWPLRVFDTSRSYDTLVISFVGHSRILQLSG 439
Query: 555 NFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW 614
+ TD GF + T C V LVQI + ++RL ++H+ W
Sbjct: 440 EEVEETDLPGFDDESQTFYCSNVCHNQLVQITEKSIRL-----ISHT-----ERRQVHEW 489
Query: 615 FPE---HVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCI 671
P+ H+S++ + ++ + +S F G E+ E + L E++C+
Sbjct: 490 KPKNDRHISVATCNKSQVLLAIGSSLHYFEIQPG---------EVIERACVDLPHEVACL 540
Query: 672 SIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVL 731
+I LVS+ S P V S+ + RVL
Sbjct: 541 TIE-------------PLVSDPSELEGPDFVT-----------ASICAVGLWNDNTARVL 576
Query: 732 ASGSIVLTNTMGTAISGCIPQDVRLVLADQF-YVLAGLRNGMLLRFEWPPDSNIPSSVAP 790
++ + A IP+ + LV D Y+L L +G L F P+
Sbjct: 577 KLPTLEEMHQQKLA-DEIIPRSILLVQFDGINYLLVTLGDGTLFYFTLNPE--------- 626
Query: 791 IHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDAD 850
T + ++P +G P L +
Sbjct: 627 ---------------------TGYISDRKKVP----------LGTQPTSLSVFTSGGSRT 655
Query: 851 MIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSL 901
+ A SDRP ++ ++ L +++++ + +H P+ S P + +N+L
Sbjct: 656 VFACSDRPTVVYSSNKKLVFSNVNLKEVSHMCPLDSDGYPDSLALANDNTL 706
>gi|402077250|gb|EJT72599.1| pre-mRNA-splicing factor RSE1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1216
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 162/721 (22%), Positives = 285/721 (39%), Gaps = 109/721 (15%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G + + Q VFG I+DLA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKILPIISQDVFGIIRDLA------SFRLAGSN---KDYIIIASDSGRITIIEYLPAKNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDK 192
F ++HL G S R G+ LA D G +++ E ++ L+ +S +++
Sbjct: 105 FH---RIHLETFGKSGVRRVIPGQYLAADPKGRACLIASVERCKLVYVLNRNSQAELT-- 159
Query: 193 KICYPSESEVDTSA--SRIAQKNSISGTIWSMCFIS-TDPRQPSK-EHNPILAIILNRRG 248
I P E+ + + S +A S +++ I TD Q SK + + +LN
Sbjct: 160 -ISSPLEAHKNGTLTLSLVALDVGYSNPVFAALEIDYTDADQDSKSDATQNVETVLN--- 215
Query: 249 ALLNELLLVGWNIREHAISVLSCFFEAGPLAHCVVEVPR-SYGFAFVFRIGDALLMDLRD 307
EL L G N H V F P A+ + +VP S G + V G ++
Sbjct: 216 --YYELDL-GLN---HV--VRKWFDVVDPTANMLFQVPGGSDGPSGVLVCGQE---NITY 264
Query: 308 PHNPSCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACA-----LLELRDYD- 361
H+ +R + A E+ N R ++ + + A LL+ D D
Sbjct: 265 RHSNQDAFRVPIPRRKGATEDPN------RKRNIVSGVMHKLKGSAGAFFFLLQTEDGDL 318
Query: 362 -----PMCIDSDSGNAKEPSKHVCSWSWEPETDKIP-KMVFCVDTGEFFMIEIAFGSDGH 415
M D++ E + + D IP C+ F + FG+ H
Sbjct: 319 FKVTIDMLEDAEGNTTGEVQRLKIKY-----FDTIPVSSNLCILKSGFLFVASEFGN--H 371
Query: 416 KVHLSECLYKGPPCKALLWVEGRFLSAFVEMGD-GMVLKEENGRLVYTSPIQNIAPILDM 474
+ E L G + L + F S E + L ++++ P++D+
Sbjct: 372 HFYQFEKL--GDDDEELEFSSENFPSDPAEPYEPAYFYPRPTENLALVESVESMNPLMDL 429
Query: 475 SVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDP 534
V + DE Q++ G + R+++ G+ + +++ + + + WT ++ D
Sbjct: 430 KVANLTDEDAPQIYTVSGNGARSTFRMLKHGLEVNEIV-ASQLPGTPSAVWTTKIARDDQ 488
Query: 535 YHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCM 594
Y S++VLSF T VL +G +V+D+ GF V TLA + + LVQ+H +R
Sbjct: 489 YDSYIVLSFTNGTLVLSIGETVEEVSDT-GFLSSVSTLAVQQLGEDGLVQVHPRGIRHI- 546
Query: 595 PTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHY 654
G+ +P P+H SI A + V+ S+ ++ S++ Y
Sbjct: 547 ------RSGVVNEWPT-----PQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEY 595
Query: 655 EIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHR 714
+ ER++ S ++ +S V P G + +G
Sbjct: 596 D-----------------------ERKEMSGTVTSLSLGEV---PEGRLRSSFLAVGCDD 629
Query: 715 PSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLL 774
+V +LS P+ L S S+ +A+S +D Y+ GL +G+ L
Sbjct: 630 CTVRILSLDPET---TLESKSVQALTAAPSALSIMAMEDSS-SGGTTLYLHIGLNSGVYL 685
Query: 775 R 775
R
Sbjct: 686 R 686
>gi|328853180|gb|EGG02320.1| hypothetical protein MELLADRAFT_44871 [Melampsora larici-populina
98AG31]
Length = 1210
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 192/448 (42%), Gaps = 87/448 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + ++++API+D + + Q+ CG SLRI+R G+ + +++ T+ +
Sbjct: 409 LVLSDELESLAPIIDAKAANLLNTDSPQILTSCGRGSRSSLRILRHGLDVSEIV-TSDLP 467
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
T WT ++ D + +++L F+ T VL +G +V+D+ GF + T++ +
Sbjct: 468 GPPTNVWTTKLNDDDLFDRYIILGFLNATLVLSIGETIVEVSDT-GFLTNSPTISIQQLD 526
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
L+QIH +R + +GG+ T W A I+VSTSN
Sbjct: 527 KNGLLQIHPTGIR-----HIHLNGGV-------TEW---------KVPAGRKIVVSTSNQ 565
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
+ ++G+ + ++E + L+ +L+ ++ E+++ S I+ +S S V
Sbjct: 566 RQV-VVGLSGGELIYFE------LDLEGQLN------EYQEQKEMGSTITTLSLSEV--- 609
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVL 758
P G IG +V+++S P VL + S+ ++ ++I CI + + +
Sbjct: 610 PKGRQRTPFLAIGLENLTVQIISLDPNS---VLETISLQALTSVPSSI--CIAELLDSSI 664
Query: 759 ---ADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSF 815
+ +V GL NG+LLR + ++ +T
Sbjct: 665 DKNNETLFVNIGLSNGVLLR--------------TVLDSVNGQLTDTR------------ 698
Query: 816 ESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISF 875
TR +G PV L+ + +IALS R WL T ++ L + + +
Sbjct: 699 --------------TRFLGSRPVKLLRVKVDSKTSVIALSSRTWLNYTYQNMLQFNPLIY 744
Query: 876 QPSTHATPVCSVECPKGILFVAENSLNL 903
+ + CP+G++ + +SL +
Sbjct: 745 DSIDNVHSFSAELCPEGLIGIVGSSLRI 772
>gi|328700785|ref|XP_001945395.2| PREDICTED: DNA damage-binding protein 1-like [Acyrthosiphon pisum]
Length = 1072
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 28/251 (11%)
Query: 431 ALLWVEGRFLSAFVEMGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKR 484
+L +++ + + + GD ++K E L N+ PI+DM +VD +
Sbjct: 333 SLTYLDNKVIYVASKFGDSQLIKLHYELNETGSHLTILDQYLNLGPIVDMCLVDIDQRGQ 392
Query: 485 DQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFV 544
+Q+ C G +GSLRII +G+ ++++ + GI G W++ LVLSFV
Sbjct: 393 EQIVTCSGAYKDGSLRIINNGVGIQEIATIDLL--GIKGIWSLSFNTKSDLDDTLVLSFV 450
Query: 545 EETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRL-CMPTMVAHSGG 603
++VL + GF ++ T CG D +VQ+ +VRL CM
Sbjct: 451 WHSKVLAYDSEEAEEIYVEGFESELQTFYCGKTLDNKMVQVTSASVRLICME-------- 502
Query: 604 IPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHM 662
S + + W P +I+ + + + S+ + + +G + +I++ +H+
Sbjct: 503 ---SKKLISEWKVPYFRNINAVSCNGHQAVCSSGHDLYYIEIGSQ-------KIFQNKHI 552
Query: 663 RLQSELSCISI 673
L+ E+SC+ I
Sbjct: 553 TLEHEVSCLDI 563
>gi|449684814|ref|XP_004210722.1| PREDICTED: DNA damage-binding protein 1-like, partial [Hydra
magnipapillata]
Length = 725
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 152/340 (44%), Gaps = 48/340 (14%)
Query: 446 MGDGMVLK-----EENGRLVYT-SPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K ++ G + N+ PILDM VVD + +DQ+ C G +GSL
Sbjct: 21 LGDSQIVKLNTEPDKKGSFITILRSFTNLGPILDMCVVDLERQGQDQLVTCSGAFKDGSL 80
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMK-VSDPYHSFLVLSFVEETRVLRVGLNFTD 558
RIIR+GI + +L + GI G W +++ ++ H +VLSFV ++RVL + +
Sbjct: 81 RIIRNGIGINEL--ASIDLAGIMGLWCLKVNSINSDLHDTMVLSFVGQSRVLSLSTEEVE 138
Query: 559 VTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP-- 616
+ GF D T C V L+Q H ++W P
Sbjct: 139 EIEIEGFSSDKQTTYCANVNFNQLIQKH----------------------FFFSNWLPPD 176
Query: 617 -EHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI-P 674
+H+S+ AV+++ IV + ++ L V I ++ H L+ E++C+ + P
Sbjct: 177 NKHISV---AVSNSFQIVVSLGKELIY------LEVEDSNIKQISHTVLEYEVACLDLSP 227
Query: 675 QKHPERRKSSSPISLVSNSSVP--ALPAGVIIGYTFVIGTHRP-SVEVLSFVPKEGLRVL 731
+ E + L ++ SV ALP + + G P S+ +++F KE L +
Sbjct: 228 KGSNETTSDRLCVGLWTDISVRILALPNLEELYVEKLSGEMIPRSILMITFEDKEYL-LC 286
Query: 732 ASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNG 771
A G L + ++G + ++ L + V+ ++G
Sbjct: 287 ALGDGSLFYFLLNRLTGVLSDQKKVSLGTKPTVIQSFKSG 326
>gi|302680006|ref|XP_003029685.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
gi|300103375|gb|EFI94782.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
Length = 1213
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 176/455 (38%), Gaps = 100/455 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYH-DEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
L ++++ PI+D V++ + Q+FA CG P SLR +R G+ +E+ + +
Sbjct: 409 LALADEVESLDPIIDSKVLNLMPNSDTPQIFAACGRGPRSSLRTLRHGLEVEESVSSD-- 466
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT + K D + S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 467 LPGIPNAVWTTKKKEDDAFDSYIILSFVNGTLVLSIGETIEEVQDT-GFLSSAPTLAVQQ 525
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVST 635
+ L+Q+H +R LS W P+ SI ++V+
Sbjct: 526 IGADALLQVHPQGIRHV------------LSDRRVNEWRVPQGKSIVQATTNKRQVVVAL 573
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
S+ ++ EL ++ +R+ S + + S+
Sbjct: 574 SSAELVYF-----------------------ELDLDGQLNEYQDRKAMGSTVLAL---SI 607
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISG 748
+P G +G +V ++S P+ L ++ SI + + AI+
Sbjct: 608 GEVPEGRQRTPFLAVGCEDQTVRIISLDPESTLDTISLQALTAPPSSICIAEMLDAAINK 667
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
P +V GL+NG+LLR + P++ +T
Sbjct: 668 THP---------TMFVNIGLQNGVLLR--------------TVLDPMTGQLTDTR----- 699
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
TR +G PV LV ++ + ++ALS R WL T ++ +
Sbjct: 700 ---------------------TRFLGTRPVKLVRVAIQRNPAIMALSSRSWLNYTHQNMV 738
Query: 869 AYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + F+ A + P+G++ + + L +
Sbjct: 739 HFTPLIFENLDFAWSFSAELSPEGLIGITGSVLRI 773
>gi|390601867|gb|EIN11260.1| hypothetical protein PUNSTDRAFT_118747 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1214
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 182/441 (41%), Gaps = 84/441 (19%)
Query: 465 IQNIAPILDMSVVDY-HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGI-T 522
+++++PI+D V++ + Q+FA CG + R +R G+ +E+ + + GI
Sbjct: 414 VESLSPIIDARVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEETVSSD--LPGIPN 471
Query: 523 GTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLL 582
WT ++K D + S+++LSFV T VL +G +V D+ GF T+A + L
Sbjct: 472 AVWTTKLKEDDAHDSYIILSFVNGTLVLSIGETIEEVQDT-GFLSSAPTIAVQQIGADAL 530
Query: 583 VQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLF 642
+Q+H +R + + +P A I+ +T+N +
Sbjct: 531 LQVHPQGIRHVLADRRVNEWRVP---------------------AGKTIVTATTNKRQVV 569
Query: 643 ILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGV 702
+ +LS + +E+ L+ +L+ ++ +R+ S + +S V P G
Sbjct: 570 V----ALSSAELVYFELD---LEGQLN------EYQDRKAMGSTVLALSIGEV---PEGR 613
Query: 703 IIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQF 762
+G +V ++S P+ L ++ ++ T I+ + + V F
Sbjct: 614 QRTPFLAVGCEDQTVRIISLDPESTLETISLQALTAPPT-AICIADMLDASINKVHPTMF 672
Query: 763 YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELP 822
V GL+NG+LLR + PI+ +T
Sbjct: 673 -VNIGLQNGVLLR--------------TVLDPINGQLTDTR------------------- 698
Query: 823 INLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHAT 882
TR +G PV L+ ++ + ++ALS R WL T + + +T + F+ A
Sbjct: 699 -------TRFLGTRPVRLIRVNVQRNPAILALSSRSWLNYTHHNLMHFTPLIFENLDFAW 751
Query: 883 PVCSVECPKGILFVAENSLNL 903
+ CP G++ +A + L +
Sbjct: 752 SFSAELCPDGLIGIAGSVLRI 772
>gi|328771718|gb|EGF81757.1| hypothetical protein BATDEDRAFT_34564 [Batrachochytrium
dendrobatidis JAM81]
Length = 1248
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 142/616 (23%), Positives = 254/616 (41%), Gaps = 98/616 (15%)
Query: 92 DLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEM--HRFFPVAQVHLSNPGN 149
+L+++ N+ N+ N DL++ SDSG LS +A C+ + F + Q ++ PG
Sbjct: 114 NLSLITKNRIRNSLN------DLILCTSDSGFLSGIALCHSFTGYSFECIFQHKIAPPGT 167
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKI-CYPSESEVDTSASR 208
S QLG ++ D IAV+A+ +R+ +F ++ S DK + + S+ ++
Sbjct: 168 SYTQLGHIVVSDPLASCIAVAAFHNRITVFPINSFSE----DKGVPLFYSQQDI-----V 218
Query: 209 IAQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISV 268
+ + NS I M F++ P P + ++ ++ E+LL WN IS
Sbjct: 219 LPKPNS---NILHMAFLNMPPEFPHIINLVVVVLVNREV-----EILLYEWNQLNGVISN 270
Query: 269 LSCFF------EAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFL 322
+ F EA PL +V +P + + + LL+ D + S R +
Sbjct: 271 FTQFVPYATGKEAVPLH--LVSLPNLPTYFLIITESELLLLSSIDMKHFSRTPRR--QHI 326
Query: 323 PPALEEQNFVDESCRVHDVDDEGLFNVAACALLE--LRDYDPMCIDSDSGNAKEPSKHVC 380
P + D E + V++ +LE DY+ + I SD G H+
Sbjct: 327 PGPFHSKEIRQ--------DLEAI--VSSVQVLESNTSDYEHLYITSDQG-------HI- 368
Query: 381 SWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFL 440
M + + + + G + L + L +L+ G F
Sbjct: 369 -------------MYLRIARAQLTIHVVHVGEKRRPISLMKSLPSSDNEHSLILF-GSFC 414
Query: 441 SAFVEMGDGMVLKEENGRLVYTSPIQN---IAPILDMSVVDYHDEKRDQMFACCGVAPEG 497
+ G+ + + ++ ++ PI N P LD + D D ++ G AP G
Sbjct: 415 N-----GEIIHINAKSLCILGNEPISNDWNAGPTLDFCLADTLGNNTDTLYMTAGAAPLG 469
Query: 498 SLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN-F 556
++ IR G+ + + T + G W +R D S LV SFV TR++ + + F
Sbjct: 470 YIQEIRHGVGV-LIDDTTKQFDGAIKLWGLRTSCEDTVDSLLVASFVASTRIMYMQDDEF 528
Query: 557 TDVTDSVGFRPDVCTL-ACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS-W 614
D++D GF DV TL G +Q+H + + + P + ++ CT+ W
Sbjct: 529 EDISDISGFTIDVATLNTAACFVSGYFIQVHLHGIIIARPLLDK-----TINNNTCTANW 583
Query: 615 FPEHVSISLGAVAHNMIIVSTSNPCFLFIL-GVRSLSVSHYEIYEMQHMRLQSELSCISI 673
P + H + + C L L G SL + I E +++++S +S IS+
Sbjct: 584 SPPN--------DHKVGFSAFYQDCVLLTLTGENSLMLLKVIIQENSNVQIES-ISSISL 634
Query: 674 PQKHPERRKSSSPISL 689
+ P + S+PI++
Sbjct: 635 DIE-PSSQYYSTPINV 649
>gi|392580116|gb|EIW73243.1| hypothetical protein TREMEDRAFT_37240 [Tremella mesenterica DSM
1558]
Length = 1214
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 176/454 (38%), Gaps = 97/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRD--QMFACCGVAPEGSLRIIRSGISLEKLLRTAP 516
L+ + ++ PILD VV+ + D Q++A CG P + R ++ G+ +++++ +P
Sbjct: 409 LLLVDTLSSLDPILDAQVVNLLGQSSDTPQIYAACGRGPRSTFRTLKHGLEIQQIV-ASP 467
Query: 517 IYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
+ WT+++ D + S++VLSF T VL +G +V D+ GF TLA
Sbjct: 468 LPGVPNAVWTLKLTEEDEFDSYIVLSFPNGTLVLSIGETIEEVNDT-GFLSSGPTLAVQQ 526
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ D L+Q+H +R I + V P +I+ ++++ S
Sbjct: 527 LGDAGLLQVHPYGLR-----------HIRAADRVDEWACPPGSAITAATTNKRQVVIALS 575
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
++ S+S Y+ L +C+SI + RR++ P
Sbjct: 576 TAELVYFELDPEGSLSEYQ----DKKSLPGNATCVSIAEVPEGRRRT------------P 619
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGC 749
L +G +V V+S P+ L L+ SI L T+I
Sbjct: 620 FL----------AVGCDNQTVHVISLEPESTLTTLSLQALTAPPASICLAEIFDTSIDKN 669
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
++ GL NG+LLR + V P+ +S T
Sbjct: 670 ---------RATMFLNIGLMNGVLLR----------TVVDPVEGSLSDT----------- 699
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
R +G P LV S ++A S R WLL T + L
Sbjct: 700 -------------------RLRFLGAKPPKLVRSSIHGSPSVMAFSSRAWLLYTYQDMLQ 740
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ + +A+ + + CP+G++ ++ N+L +
Sbjct: 741 TQPLIYDALEYASTLSAAMCPEGLIGISGNTLRI 774
>gi|341886300|gb|EGT42235.1| hypothetical protein CAEBREN_28831 [Caenorhabditis brenneri]
Length = 1005
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 106/519 (20%), Positives = 194/519 (37%), Gaps = 104/519 (20%)
Query: 392 PKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSA--FVEMGDG 449
P C+ F + FG+ H+++ L +G + F SA F E
Sbjct: 336 PANAMCILKSGFLFVAAEFGN--HELYQIASLGEGG--------DDEFSSAMGFGENDAA 385
Query: 450 MVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLE 509
E L+ + +++P+ D + D E Q++ G +L+++R+G+ +
Sbjct: 386 FFEPHELRSLIPIDSMDSLSPLTDAVIGDVAREDAAQLYTLVGRGARSNLKVLRNGLEIS 445
Query: 510 KLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
++ + + WTV+ + D Y S++V+SFV T L +G + +DS GF P
Sbjct: 446 EMA-VSDLPGNPNAVWTVKKNIEDQYDSYIVVSFVNATLALTIGDTVEEASDS-GFLPTT 503
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHN 629
T+ C ++ D LVQI+ +R I + P I V
Sbjct: 504 PTIGCSMIGDDSLVQIYAEGIR-----------HIRADKRINEWKAPPRRQIVKCCVNRR 552
Query: 630 MIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISL 689
+ V+ S ++ EL + ER+ ++ I+
Sbjct: 553 QVAVALSGGELVYF-----------------------ELDLNGTLNEFTERKLFNADIAC 589
Query: 690 VSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGC 749
++ S + G + +GT +V ++S P + L L++ ++ C
Sbjct: 590 MTFSEI---SEGELNSRFLALGTVDNAVRIISLDPNDMLMPLSTQNLP-----------C 635
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISAT----FRNT-EN 804
P+ + L+ + P D VA +H I FRNT +N
Sbjct: 636 PPESILLI-------------------DTPNDDG--KGVAAVHLNIGLQNGCLFRNTVDN 674
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA 864
+ I T TR +G PV L + + ++ S R WLL
Sbjct: 675 VTGAIMDTR----------------TRYLGTRPVKLFKVQVQGRSAILCTSSRSWLLYHF 718
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ T +S+ +A CS +C +GI+ ++ ++L +
Sbjct: 719 QRRFHLTPLSYVNLEYAASFCSNQCAEGIVAISSSTLRI 757
>gi|303271531|ref|XP_003055127.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463101|gb|EEH60379.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1223
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 177/449 (39%), Gaps = 85/449 (18%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
++ PI+D VVD + Q+ C GV +GSLR++R+G+ + + + A G+ G W
Sbjct: 408 SLGPIVDFVVVDLDRHGQGQVVTCSGVHKDGSLRVVRNGVGIHE--QAAIELPGVKGCWA 465
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVG-LNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ +FLV++F+ ETR+L + + D T+ GF D LAC V G Q+
Sbjct: 466 LKNADDAVSDTFLVVAFIGETRILAINDKDELDETEFEGFAGDERALACANVDGGYACQV 525
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPE-HVSISLGAVAHNMIIVSTSNPCFLFIL 644
+RL A + W PE +S+ A ++V+ + +
Sbjct: 526 TSGGIRLVDVATGA----------LRARWTPEPGERVSVAAANRTQVVVALEGGTLVSVA 575
Query: 645 ---GVRSLSVSHYE--IYEMQHMRLQSELSCISI-PQKHPERRKSSSPISLVSNSSVPAL 698
G ++ V + E+ + + E++C+ + P P R +SS I V S
Sbjct: 576 AGGGGDAMDVDDASPLLRELARVNVGHEIACLDVTPLADP--RAASSEICAVGLWSAE-- 631
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVL 758
+RVLA+ ++ ++ + IP+ V L
Sbjct: 632 -----------------------------VRVLATATLEELSSAPLTDAEVIPRAVLLCS 662
Query: 759 ADQF-YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFES 817
+ Y+LAGL +G L F + RSGI S
Sbjct: 663 FEGIPYLLAGLGDGQLFTFALMGE------------------------RSGIIGDGKKLS 698
Query: 818 KDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQP 877
++ R+G+ P+ L + + A SDRP ++ + L Y++++ +
Sbjct: 699 VGTQARSIHWFPYDRVGV-PITLKTFRNKNTTHVFAGSDRPTVIYSQNKKLIYSNVNLRE 757
Query: 878 STHATPVCSVEC---PKGILFVAENSLNL 903
H +C+ C P + +E+ L +
Sbjct: 758 VLH---MCAFNCDAFPDSLALASESELTI 783
>gi|341886293|gb|EGT42228.1| CBN-TEG-4 protein [Caenorhabditis brenneri]
Length = 1006
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 106/519 (20%), Positives = 194/519 (37%), Gaps = 104/519 (20%)
Query: 392 PKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSA--FVEMGDG 449
P C+ F + FG+ H+++ L +G + F SA F E
Sbjct: 336 PANAMCILKSGFLFVAAEFGN--HELYQIASLGEGG--------DDEFSSAMGFGENDAA 385
Query: 450 MVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLE 509
E L+ + +++P+ D + D E Q++ G +L+++R+G+ +
Sbjct: 386 FFEPHELRSLIPIDSMDSLSPLTDAVIGDVAREDAAQLYTLVGRGARSNLKVLRNGLEIS 445
Query: 510 KLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
++ + + WTV+ + D Y S++V+SFV T L +G + +DS GF P
Sbjct: 446 EMA-VSDLPGNPNAVWTVKKNIEDQYDSYIVVSFVNATLALTIGDTVEEASDS-GFLPTT 503
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHN 629
T+ C ++ D LVQI+ +R I + P I V
Sbjct: 504 PTIGCSMIGDDSLVQIYAEGIR-----------HIRADKRINEWKAPPRRQIVKCCVNRR 552
Query: 630 MIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISL 689
+ V+ S ++ EL + ER+ ++ I+
Sbjct: 553 QVAVALSGGELVYF-----------------------ELDLNGTLNEFTERKLFNADIAC 589
Query: 690 VSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGC 749
++ S + G + +GT +V ++S P + L L++ ++ C
Sbjct: 590 MTFSEI---SEGELNSRFLALGTVDNAVRIISLDPNDMLMPLSTQNLP-----------C 635
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISAT----FRNT-EN 804
P+ + L+ + P D VA +H I FRNT +N
Sbjct: 636 PPESILLI-------------------DTPNDDG--KGVAAVHLNIGLQNGCLFRNTVDN 674
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA 864
+ I T TR +G PV L + + ++ S R WLL
Sbjct: 675 VTGAIMDTR----------------TRYLGTRPVKLFKVQVQGRSAILCTSSRSWLLYHF 718
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ T +S+ +A CS +C +GI+ ++ ++L +
Sbjct: 719 QRRFHLTPLSYVNLEYAASFCSNQCAEGIVAISSSTLRI 757
>gi|357606250|gb|EHJ64976.1| putative Splicing factor 3B subunit [Danaus plexippus]
Length = 1216
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 182/471 (38%), Gaps = 87/471 (18%)
Query: 436 EGRFLSAF-VEMGDGMVLKEENGR-LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
E F SA +E GD R LV + +++PIL V D E Q++ CG
Sbjct: 370 EPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILACHVADLTGEDTPQVYLACGR 429
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
P SLR +R G+ + ++ + + WTVR D Y S++++SFV T VL +G
Sbjct: 430 GPRSSLRALRHGLEVAEMA-VSELPGSPNAVWTVRRHKDDDYDSYIIVSFVNATLVLSIG 488
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
+VTDS GF TL+C + LVQ++ + +R I V
Sbjct: 489 ETVEEVTDS-GFLGTTPTLSCHALGSDALVQVYPDGIR-----------HIRADKRVNEW 536
Query: 614 WFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
P SI AV ++++ + ++ E+
Sbjct: 537 KAPGKKSIVKCAVNQRQVVIALTGGELVYF-----------------------EMDPTGQ 573
Query: 674 PQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLAS 733
++ ER+K SS +S ++ SV G + +G +V ++S P + L +
Sbjct: 574 LNEYTERKKLSSDVSCMALGSV---ATGEQRAWFLAVGLVDNTVRIISLDPADCLAPRSM 630
Query: 734 GSIVLTNTMGTAISGCI-PQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIH 792
++ + S CI Q ++ GL NG+LLR
Sbjct: 631 QALP-----ASPESLCIVDQPFESGAKSALHLNIGLSNGVLLR----------------- 668
Query: 793 SPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMI 852
+++ +A T + R +G PV L + ++
Sbjct: 669 -------TTLDSVSGDLADTRT----------------RYLGSRPVKLFKVRVQSAEAVL 705
Query: 853 ALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
A+S R WL ++ T +S++ +A S +C +GI+ ++ N+L +
Sbjct: 706 AVSSRTWLGYQYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRI 756
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 32 YLAKCVLKGSVVLQVA-HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGT 89
YL L+GS + A HG+ +++ + ++EL+ + G V ++ + +FG
Sbjct: 2 YLYNLTLQGSTAISHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTLMKVEIFGV 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ + F KD +VV SDSG++ L + + V Q G
Sbjct: 62 IRSMM------SFRLTGGT---KDYIVVGSDSGRIVILEYIPAKNILEKVHQETFGKSGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLS 182
R G+ LA+D G + + A E + ++ L+
Sbjct: 113 RRIVPGQYLAIDPKGRAVMIGAIEKQKLVYILN 145
>gi|323454388|gb|EGB10258.1| hypothetical protein AURANDRAFT_23619 [Aureococcus anophagefferens]
Length = 1212
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 167/434 (38%), Gaps = 91/434 (20%)
Query: 471 ILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMK 530
I D+ D E+ Q++A CG SLR++R G+++ ++ + + + WTVR +
Sbjct: 415 ITDVYCGDLAGEEAPQVYALCGKGHRSSLRVLRHGVAVSEMA-VSELPGRPSAVWTVRGR 473
Query: 531 VSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAV 590
+PY ++V+SF T VL +G +VTDS GF TL L+AD L+Q+H +
Sbjct: 474 HDEPYDKYIVVSFTNATLVLSIGETVEEVTDS-GFLATAPTLDVALLADNALLQVHGEGI 532
Query: 591 RLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSL 649
R G + +S W P +I A + + + ++ L
Sbjct: 533 RHV-------RGDLRIS-----EWKTPGRKAIEKAAANERQVAAALAGGEVIYF----EL 576
Query: 650 SVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFV 709
S + E+ L E++C+ V +PAG
Sbjct: 577 DASG-ALAELGTKELGVEVACL----------------------DVGVVPAGRARAPFLA 613
Query: 710 IGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLR 769
+G S+ +LS P E L +A+ + ++ C D RL +A AGL
Sbjct: 614 LGGWDGSLRLLSLAPDELLVQVATMQL---GARAESVRFCETPDGRLGVA------AGLA 664
Query: 770 NGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIA 829
NG+L R + + A+ + R+
Sbjct: 665 NGVLQR-----------------AAVDASTGQLGDARA---------------------- 685
Query: 830 TRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVEC 889
R +G V L + ++ALS R WL L +S+ HA S +C
Sbjct: 686 -RFLGSRAVRLFRVDVGGAPGLLALSSRAWLCYAHAGRLETAPLSYDALEHAAGFKSEQC 744
Query: 890 PKGILFVAENSLNL 903
P+G++ +A ++L +
Sbjct: 745 PEGVVAIAGSTLRI 758
>gi|221044336|dbj|BAH13845.1| unnamed protein product [Homo sapiens]
Length = 222
Score = 82.4 bits (202), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 53 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 112
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RIIR+GI + + + GI G W +R + LVLSFV +TRVL + +
Sbjct: 113 RIIRNGIGIHE--HASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEE 170
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQ 584
T+ +GF D T CG VA L+Q
Sbjct: 171 TELMGFVDDQQTFFCGNVAHQQLIQ 195
>gi|260790329|ref|XP_002590195.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
gi|229275385|gb|EEN46206.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
Length = 1152
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 111/518 (21%), Positives = 200/518 (38%), Gaps = 102/518 (19%)
Query: 400 TGEFFMI-----EIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLK- 453
+G FM+ E+ GS K E L + + L +++ + +GD ++K
Sbjct: 277 SGRLFMLLLEKEELIDGSVTVKDLKVELLGETSIAECLTYLDNGVVYLGSRLGDSQLIKL 336
Query: 454 ----EENGRLVYT-SPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISL 508
+++G V+ N+ PI+DM VVD + + Q+ C G EGSLRIIR+GI +
Sbjct: 337 NVDADDSGSYVHVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAYKEGSLRIIRNGIGI 396
Query: 509 EKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPD 568
+ + GI G W + + + LVL+FV +TRVL + + T+ GF D
Sbjct: 397 HE--HASIDLPGIKGIWPLCVDPNGTMDDTLVLAFVGQTRVLLLSGEEVEETELPGFE-D 453
Query: 569 VCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVA 627
T CG V G L+QI +VRL + + + W P +IS+ +
Sbjct: 454 KQTFFCGNVMGGQLLQITAASVRLVSRQ----------TKQLVSEWKPPSEKNISVASSN 503
Query: 628 HNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPI 687
++ + + + + E+ ++ + E++C+ + +P
Sbjct: 504 TTQVVCAVGQVVYY-------IEIHEGELKQLGETVMAREVACLDV-----------TP- 544
Query: 688 SLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAIS 747
LV S L A +G I H + L + E L G I+ + + T
Sbjct: 545 -LVEGSDRAHLCA---VGLWTDISAHMLQLPNLEPMHVEML----GGEIIPRSILMTTFE 596
Query: 748 GCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDS--NIPSSVAPIHSPISATFRNTENI 805
G Y+L L +G L F P++ N + I S ++
Sbjct: 597 GI------------HYLLCALGDGSLFYFNLNPETGKNFSLHILTIKSKVT--------- 635
Query: 806 RSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTAR 865
+G P L ++ A SDRP ++ ++
Sbjct: 636 ---------------------------LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN 668
Query: 866 HSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
H L +++++ + + P+ S P + +++L +
Sbjct: 669 HKLVFSNVNLKEVNYMCPLNSQGYPDSLALTNDSTLTI 706
>gi|169848339|ref|XP_001830877.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
gi|116508046|gb|EAU90941.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
Length = 1213
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 184/454 (40%), Gaps = 98/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDY-HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
L ++++ PILD V++ + Q+FA CG +LR +R G+ +E+ + +
Sbjct: 409 LALADELESLDPILDSKVLNLLPNSDAPQIFAACGRGARSTLRTLRHGLEVEESVSSE-- 466
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT + DPY S+++LSFV T VL +G +V D+ GF T+A
Sbjct: 467 LPGIPNAVWTTKKTEEDPYDSYIILSFVNGTLVLSIGETIEEVQDT-GFLSSSPTIAVQQ 525
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H + +R + + +P I+ +T+
Sbjct: 526 IGADALLQVHPHGIRHVLADRRVNEWRVPQG---------------------KTIVTATT 564
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
N + ++ + S + ++E + L +L+ ++ +R+ S + + S+
Sbjct: 565 NKRQV-VVALSSAELVYFE------LDLDGQLN------EYQDRKAMGSTVLAL---SIG 608
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGC 749
+P G +G +V ++S P+ L L+ SI + + + +I+
Sbjct: 609 EVPEGRQRTPYLAVGCEDQTVRIISLDPETTLETLSLQALTAPPSSICIADMLDASINKS 668
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
P +V GL+NG+LLR + PI+ +T
Sbjct: 669 QP---------TMFVNIGLQNGVLLR--------------TVLDPINGQLTDTR------ 699
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
TR +G P+ L+ + + ++ALS R W+ T ++ +
Sbjct: 700 --------------------TRFLGTRPIKLIRVPVHKNPAILALSSRSWINYTHQNMMH 739
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + + +A + P+G++ +A N L +
Sbjct: 740 FTPLIYDNLDYAWSFSAELSPEGLIGIAGNVLRI 773
>gi|156406895|ref|XP_001641280.1| predicted protein [Nematostella vectensis]
gi|156228418|gb|EDO49217.1| predicted protein [Nematostella vectensis]
Length = 1171
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 75/133 (56%), Gaps = 2/133 (1%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV ++++API++ + D +E Q+FA CG SLR++R G+ + ++ + +
Sbjct: 395 LVLVDELESLAPIMNCQIADLANEDTPQLFAACGRGSRSSLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ +D + +++V+SF+ T VL +G +VTDS GF TL+C +
Sbjct: 454 GNPNAVWTVKHTTADEFDAYIVVSFINATLVLSIGETVEEVTDS-GFLGTTPTLSCSQLG 512
Query: 579 DGLLVQIHQNAVR 591
+ LVQI+ + +R
Sbjct: 513 EEALVQIYPDGIR 525
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 10/159 (6%)
Query: 30 IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFG 88
+H A + + S + HG+ ++V + +EL+ + G V V +FG
Sbjct: 1 MHLYALTLQRASAINNTIHGNFSGTKQQEIVVSRGKFVELLRTDPNTGKVFPVLAIEMFG 60
Query: 89 TIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
++DL KD +VV SDSG++ L + + F V Q G
Sbjct: 61 IVRDLIAFRLTGG---------SKDFIVVGSDSGRIVILEYIPSKNVFEKVHQETFGKSG 111
Query: 149 NSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGS 187
R G+ LA D G I + A E + ++ ++ S +
Sbjct: 112 CRRIVPGQYLAADPKGRAIMIGAIEKQKLVYIMNRDSAA 150
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 34/55 (61%)
Query: 849 ADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+++A+S R WL T + + T +S++ +A+ S +CP+GI+ +A N+L +
Sbjct: 677 GEVLAMSSRSWLSYTHQSRVHLTPLSYETLEYASGFSSEQCPEGIVAIAGNTLRI 731
>gi|342885857|gb|EGU85809.1| hypothetical protein FOXB_03657 [Fusarium oxysporum Fo5176]
Length = 1189
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 119/265 (44%), Gaps = 42/265 (15%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + P N P+LD V + E Q++ CG P S R+++ G+ + +++
Sbjct: 412 ENLALVESIPAMN--PLLDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIV-- 467
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
A GI + WT+++ S+ Y +++VLSF T VL +G +V+DS GF V TLA
Sbjct: 468 ASELPGIPSAVWTLKLNRSEQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTSVPTLA 526
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSI-SLGAVAHNMI 631
L+ D L+Q+H +R V W P+H SI + A AH +
Sbjct: 527 AQLLGDDGLIQVHPKGIRHVRNGHV-------------NEWAAPQHRSIVAATANAHQVA 573
Query: 632 IVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS------- 684
+ +S F + S++ Y+ + + ++C+S+ R +SS
Sbjct: 574 VALSSGEIVYFEMDADG-SLAEYD----EKKEMFGTVTCLSLGDVPEGRLRSSFLAVGCD 628
Query: 685 ---------SPISLVSNSSVPALPA 700
P S + N SV AL A
Sbjct: 629 DCTVRILSLDPESTLENKSVQALTA 653
>gi|308505958|ref|XP_003115162.1| CRE-TEG-4 protein [Caenorhabditis remanei]
gi|308259344|gb|EFP03297.1| CRE-TEG-4 protein [Caenorhabditis remanei]
Length = 1013
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/522 (20%), Positives = 198/522 (37%), Gaps = 105/522 (20%)
Query: 392 PKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSA--FVEMGDG 449
P C+ F I FG+ H+++ L +G + F SA F E
Sbjct: 336 PANAMCILKAGFLFIAAEFGN--HELYQIASLGEGG--------DDEFSSAMGFGENDAA 385
Query: 450 MVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLE 509
E L+ + +++P+ D + D E Q++ G ++++R+G+ +
Sbjct: 386 FFEPHELRSLIPIDSMDSLSPLTDAVIGDIAREDAAQLYTLIGRGSRSHMKVLRNGLEIS 445
Query: 510 KLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
++ + + WTV+ + D Y S++V+SFV T L +G + +DS GF P
Sbjct: 446 EMA-VSDLPGNPNAVWTVKKNIEDQYDSYIVVSFVNATLALTIGDTVEEASDS-GFLPTT 503
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIP--LSYPVCTSW-FPEHVSISLGAV 626
T+ C ++ D LVQ+ +N + +S GI + W P I AV
Sbjct: 504 PTIGCSMIGDDSLVQVIRNQI---------YSEGIRHIRADKRINEWKVPPRRQIVKCAV 554
Query: 627 AHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSP 686
+ V+ S ++ EL + ER+ ++
Sbjct: 555 NRRQVAVALSGGELVYF-----------------------ELDLNGTLNEFTERKLFNAD 591
Query: 687 ISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAI 746
I+ ++ S + G + +GT +V ++S P + L L++ ++
Sbjct: 592 IACMTFSEI---SEGELNSRFLALGTVDNAVRIISLDPNDMLMPLSTQNLP--------- 639
Query: 747 SGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISAT----FRNT 802
C P+ + L+ + P + VA +H I FRNT
Sbjct: 640 --CPPESILLI-------------------DTPNEDG--KGVAAVHLNIGLQNGCLFRNT 676
Query: 803 -ENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLL 861
+N+ I T TR +G PV L + + ++ S R WLL
Sbjct: 677 VDNVTGAIMDTR----------------TRYLGTRPVKLFKVQCQGRSAILCTSSRSWLL 720
Query: 862 QTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ T +S+ +A CS +C +GI+ ++ ++L +
Sbjct: 721 YHFQRRFHLTPLSYANLEYAASFCSNQCAEGIVAISASTLRI 762
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 32 YLAKCVLKGSVVL-QVAHGHLR-SPTSNDVVFGKETSIELVIIGE-DGIVQSVCEQAVFG 88
+L L+G + Q G+ +P S ++V G+ +++EL+ + G ++ +C Q +FG
Sbjct: 2 HLYNLTLQGQTAINQAIQGNFSGTPKSQEIVIGRGSALELLTLDTVTGKIKVMCHQDIFG 61
Query: 89 TIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
++ L + A +D + V SDSG++ L + E F + Q G
Sbjct: 62 IVRSLLAF----RLTAGT-----RDFIAVGSDSGRIVILQYNAEKTCFERLHQETFGKTG 112
Query: 149 NSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
R G LA D G + + A E + ++ ++ S
Sbjct: 113 CRRIVPGHYLAGDPRGRALMIGAVERQKLVYIMNRDS 149
>gi|291000406|ref|XP_002682770.1| predicted protein [Naegleria gruberi]
gi|284096398|gb|EFC50026.1| predicted protein [Naegleria gruberi]
Length = 1216
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 174/443 (39%), Gaps = 91/443 (20%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
I+++AP+ DM V D E Q++ G P SLR +R G+ + + + AP+ Q T
Sbjct: 417 IKSLAPVTDMKVTDLMGEGTPQIYCLNGRGPTSSLRSLRYGLPVNEEV-AAPLDQQATAI 475
Query: 525 WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTL-ACGLVADGLLV 583
+TV+ ++D + +++LSF E T VL VG N +VT+S GF T+ A + G V
Sbjct: 476 FTVKESMNDTFDKYIILSFSEFTMVLSVGENVAEVTES-GFLTTTKTIYASNIGESGEFV 534
Query: 584 QIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFI 643
Q+H +R P V W + I AV I+VS S ++
Sbjct: 535 QVHPKGIRHIHPDRV-------------NEWNSGNKIIEKAAVNGYQIVVSLSGGEIIYF 581
Query: 644 LGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVI 703
S + E + L +++C+++ SPI G
Sbjct: 582 ----EYDTSSGNLIETERNDLSQDVACLAL-----------SPIQ-----------DGRT 615
Query: 704 IGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAI---SGCIPQDVRLVLAD 760
G +G + +V ++S + + +L+ ++ + I SG + L
Sbjct: 616 RGRFLAVGFYDKTVRLISLGEYDMMSILSRQALPADPESLSLIELQSGHSRDETSL---- 671
Query: 761 QFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDE 820
Y+ GL NG+LLR S + SS + S + F T+ ++
Sbjct: 672 --YLNIGLSNGILLR------STVDSSTGEL-SDTRSRFLGTKGVK-------------- 708
Query: 821 LPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTH 880
L+ + R D ++ALS +PWL + + T +S+
Sbjct: 709 ----LRNVKVRG---------------DNAILALSSKPWLGNSINGKIEMTPLSYPALNS 749
Query: 881 ATPVCSVECPKGILFVAENSLNL 903
A S + G++ + L +
Sbjct: 750 ACNFSSEQIRDGLVSITAEHLRI 772
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 46 VAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQ 105
+ H R PT ++V K +EL E+G ++ + Q VFG I+ + +
Sbjct: 30 LTEKHYR-PT--EIVMAKGNILELYECEENGNLKCLISQDVFGVIRSITSFKF------- 79
Query: 106 NSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGC 165
S + KD + + SDSG + L + +++F + G R G+ LA D G
Sbjct: 80 -SNTVEKDYIAIGSDSGSIVILEVNSNLNKFTQIHHETYGKTGCRRIVPGQYLAADPKGR 138
Query: 166 LIAVSAYEDRLGLFSLSM 183
+ + A E + ++ L+M
Sbjct: 139 ALMIGAVEKQKFVYVLNM 156
>gi|46125735|ref|XP_387421.1| hypothetical protein FG07245.1 [Gibberella zeae PH-1]
Length = 1208
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 42/265 (15%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + P N P+LD V + E Q++ CG P S R+++ G+ + +++
Sbjct: 412 ENLALVESIPAMN--PLLDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIV-- 467
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
A GI + WT+++ S+ Y +++VLSF T VL +G +V+DS GF V TLA
Sbjct: 468 ASELPGIPSAVWTLKLNRSEQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTSVPTLA 526
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSI-SLGAVAHNMI 631
L+ D L+Q+H +R +G + W P+H SI + A AH +
Sbjct: 527 AQLLGDDGLIQVHPKGIRHI------RNGNV-------NEWAAPQHRSIVAATANAHQVA 573
Query: 632 IVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS------- 684
+ +S F + S++ Y+ + + ++C+S+ R +SS
Sbjct: 574 VALSSGEIVYFEMDADG-SLAEYD----EKKEMFGTVTCLSLGDVPEGRLRSSFLAVGCD 628
Query: 685 ---------SPISLVSNSSVPALPA 700
P S + N SV AL A
Sbjct: 629 DCTVRILSLDPESTLENKSVQALTA 653
>gi|378730762|gb|EHY57221.1| pre-mRNA-splicing factor rse1 [Exophiala dermatitidis NIH/UT8656]
Length = 1210
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 165/442 (37%), Gaps = 97/442 (21%)
Query: 470 PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRM 529
P+LD V + DE Q+++ CG S + ++ G+S+ +++ + + WT ++
Sbjct: 422 PLLDCKVANLLDEDAPQIYSICGAGARSSFKTLKHGLSVSEIVESE-LPDKPEAVWTTKL 480
Query: 530 KVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNA 589
D Y ++++LSF T VL +G +VTD+ GF TLA + + LVQ+H
Sbjct: 481 TRDDQYDAYIILSFRTGTLVLSIGETVEEVTDT-GFLSTAPTLAVQQLGEDALVQVHPKG 539
Query: 590 VRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSL 649
+R + +P P+H SI + V+ S+ ++
Sbjct: 540 IRHIRADKRVN------EWPA-----PQHRSIVAATTNERQVAVALSSGEIVYFEMDTDG 588
Query: 650 SVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFV 709
S++ Y+ ERR+ + ++ +S V P G +
Sbjct: 589 SLAEYD-----------------------ERREMTGTVTCLSLGDV---PEGRVRSSFLA 622
Query: 710 IGTHRPSVEVLSFVPKEGL-----RVLASGSIVLT-NTMGTAISGCIPQDVRLVLADQFY 763
+G +V +LS P L + L S L+ M + SG Y
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMADSTSG----------GTTMY 672
Query: 764 VLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPI 823
+ GL +G+ LR DE+
Sbjct: 673 LHIGLYSGVYLR----------------------------------------TVLDEITG 692
Query: 824 NLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL--LQTARHSLAYTSISFQPSTHA 881
L TR +G+ P L +S ++ALS RPWL T + T + + P +
Sbjct: 693 ELSDTRTRFLGLRPAKLFRVSVKGQNAVMALSSRPWLGYTDTQTNGFMLTPLDYVPLQYV 752
Query: 882 TPVCSVECPKGILFVAENSLNL 903
S +CP+G++ + +L +
Sbjct: 753 WNFTSEQCPEGMVGIQGQNLRI 774
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G + + Q FG I+ LA F S KD L+V SDSG+++ L + + +R
Sbjct: 54 GKISPLFTQDCFGIIRSLAA------FRLAGS---SKDYLIVGSDSGRITILEYVKDQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F +VHL G S R G+ LAVD G C+IA
Sbjct: 105 F---NRVHLETFGKSGIRRVIPGQYLAVDPKGRACIIA 139
>gi|408400551|gb|EKJ79630.1| hypothetical protein FPSE_00190 [Fusarium pseudograminearum CS3096]
Length = 1212
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 42/265 (15%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + P N P+LD V + E Q++ CG P S R+++ G+ + +++
Sbjct: 412 ENLALVESIPAMN--PLLDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIV-- 467
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
A GI + WT+++ S+ Y +++VLSF T VL +G +V+DS GF V TLA
Sbjct: 468 ASELPGIPSAVWTLKLNRSEQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTSVPTLA 526
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSI-SLGAVAHNMI 631
L+ D L+Q+H +R +G + W P+H SI + A AH +
Sbjct: 527 AQLLGDDGLIQVHPKGIRHI------RNGNV-------NEWAAPQHRSIVAATANAHQVA 573
Query: 632 IVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS------- 684
+ +S F + S++ Y+ + + ++C+S+ R +SS
Sbjct: 574 VALSSGEIVYFEMDADG-SLAEYD----EKKEMFGTVTCLSLGDVPEGRLRSSFLAVGCD 628
Query: 685 ---------SPISLVSNSSVPALPA 700
P S + N SV AL A
Sbjct: 629 DCTVRILSLDPESTLENKSVQALTA 653
>gi|378730761|gb|EHY57220.1| pre-mRNA-splicing factor rse1, variant [Exophiala dermatitidis
NIH/UT8656]
Length = 914
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 165/442 (37%), Gaps = 97/442 (21%)
Query: 470 PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRM 529
P+LD V + DE Q+++ CG S + ++ G+S+ +++ + + WT ++
Sbjct: 126 PLLDCKVANLLDEDAPQIYSICGAGARSSFKTLKHGLSVSEIVESE-LPDKPEAVWTTKL 184
Query: 530 KVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNA 589
D Y ++++LSF T VL +G +VTD+ GF TLA + + LVQ+H
Sbjct: 185 TRDDQYDAYIILSFRTGTLVLSIGETVEEVTDT-GFLSTAPTLAVQQLGEDALVQVHPKG 243
Query: 590 VRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSL 649
+R + +P P+H SI + V+ S+ ++
Sbjct: 244 IRHIRADKRVN------EWPA-----PQHRSIVAATTNERQVAVALSSGEIVYFEMDTDG 292
Query: 650 SVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFV 709
S++ Y+ ERR+ + ++ +S V P G +
Sbjct: 293 SLAEYD-----------------------ERREMTGTVTCLSLGDV---PEGRVRSSFLA 326
Query: 710 IGTHRPSVEVLSFVPKEGL-----RVLASGSIVLT-NTMGTAISGCIPQDVRLVLADQFY 763
+G +V +LS P L + L S L+ M + SG Y
Sbjct: 327 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMADSTSG----------GTTMY 376
Query: 764 VLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPI 823
+ GL +G+ LR DE+
Sbjct: 377 LHIGLYSGVYLR----------------------------------------TVLDEITG 396
Query: 824 NLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL--LQTARHSLAYTSISFQPSTHA 881
L TR +G+ P L +S ++ALS RPWL T + T + + P +
Sbjct: 397 ELSDTRTRFLGLRPAKLFRVSVKGQNAVMALSSRPWLGYTDTQTNGFMLTPLDYVPLQYV 456
Query: 882 TPVCSVECPKGILFVAENSLNL 903
S +CP+G++ + +L +
Sbjct: 457 WNFTSEQCPEGMVGIQGQNLRI 478
>gi|389586447|dbj|GAB69176.1| splicing factor 3B subunit 3 [Plasmodium cynomolgi strain B]
Length = 1286
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 179/453 (39%), Gaps = 97/453 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRT 514
L + +++PILDM ++D + Q++A CG P SLRI++ G+S+E+L L
Sbjct: 395 LFLIDQVYSLSPILDMKILDAKNANSPQIYALCGRGPRSSLRILQHGLSIEELADNELPG 454
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
P + WT++ + Y ++++SF T +L +G +V DS+ +V T+
Sbjct: 455 RPKF-----IWTIKKDNASDYDGYIIVSFEGSTLILEIGETVEEVVDSL-LLTNVTTIHV 508
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIV 633
++ D L+Q+H +R H G V W P++ I I++
Sbjct: 509 NILYDNTLIQVHDTGIR--------HING-----KVVHEWVPPKNKQIKAATSNSTQIVI 555
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNS 693
S S ++ + SH + E+ L E C+SI Q + +++
Sbjct: 556 SLSGGELIYF----EIDESH-TLVEIFRKNLNVETLCLSIQQVEENKLRAN--------- 601
Query: 694 SVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQD 753
+G V +LS + KE S I+ N+ I CI Q
Sbjct: 602 -------------FLAVGCLDNVVRLLS-IEKEKYFNQLSTFILPNNSSAQDI--CISQM 645
Query: 754 VRLVLADQ---FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
L + ++ GL NG+LLR + PI+ T N +
Sbjct: 646 CELGNDKERKLIFLNIGLNNGVLLR--------------SVVDPITGTLTNHYS------ 685
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
+ + + + I PV L ++ ++ L ++ +L + Y
Sbjct: 686 ---------------KYLGAKNVKICPVHL-----KKNSALLVLCEKTYLCYVHQGKYIY 725
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ +++ +A+ S +C G + ++ +SL +
Sbjct: 726 SPLNYDILEYASSFHSEQCSDGYVAISGSSLRI 758
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPW 98
K + + ++A+G+ P +++V K +EL+ + G + + + VFG I+ L
Sbjct: 11 KPTAITKIAYGNFSGPKVHEIVVSKGQVLELLRADKQGKLNLIASKDVFGIIRCL----- 65
Query: 99 NKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRML 158
+ F S KD +V+ SDSG+L L F NE + F V G R G +
Sbjct: 66 -QTFRLTGSN---KDYVVIGSDSGRLVILQFSNEKNDFVRVHCETYGKSGLRRIIPGEYI 121
Query: 159 AVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
AVD G + + A E + ++ L+ + +
Sbjct: 122 AVDPKGRALMICAIERQKFVYILNRDTKEQL 152
>gi|290998415|ref|XP_002681776.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
gi|284095401|gb|EFC49032.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
Length = 1103
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 29/251 (11%)
Query: 447 GDGMVLK-------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
GD V++ E N NI PI+D VD + + Q+ C G +GSL
Sbjct: 325 GDSQVIRISDELNPETNSYFEVFQTYSNIGPIVDFCFVDADKQGQGQIVTCSGAFKDGSL 384
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
RII++GI +E+L + + G+ W+++ + + +LV+SF +T + V
Sbjct: 385 RIIKNGIGIEELTTISDLV-GLNRIWSLKTETGE--EKYLVMSFTGQTLISSVDNEEIGE 441
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHV 619
GF D T+ C V +Q+ RL + +H + + W P
Sbjct: 442 AKIPGFDVDSTTVLCDTVIGNNYLQVTDKTARL----VSSH------TLELIDEWKPSSG 491
Query: 620 SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPE 679
+ISL A ++VS ++I +S + ++Q +L E+SCI I PE
Sbjct: 492 TISLAASNPTQLVVSLGEGKLVYI------EISAQSLKQIQQTKLDYEVSCIDIS---PE 542
Query: 680 RRKSSSPISLV 690
K SS + V
Sbjct: 543 EGKISSTVCAV 553
>gi|426192113|gb|EKV42051.1| hypothetical protein AGABI2DRAFT_229642 [Agaricus bisporus var.
bisporus H97]
Length = 1213
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 182/454 (40%), Gaps = 98/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDY-HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
L ++++ PI+D V++ + Q+FA CG SLR ++ G+ +E+ + +
Sbjct: 409 LALADELESLDPIIDSKVLNLLPNSDTPQIFAACGRGARSSLRTLQHGLEVEESVSSD-- 466
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT + DPY S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 467 LPGIPNAVWTTKRNEDDPYDSYIILSFVNGTLVLSIGETIEEVQDT-GFLSSAPTLAVQQ 525
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H + +R + + +P N IIV+ +
Sbjct: 526 IGSDALLQVHPHGIRHVLADRRVNEWRVP----------------------SNKIIVAAT 563
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
++ + S + ++E + L +L+ ++ +R+ S + +S V
Sbjct: 564 TNKRQVVVALSSAELVYFE------LDLDGQLN------EYQDRKAMGSTVLALSIGDV- 610
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGC 749
P G +G +V ++S P+ L ++ +I + + + +I+
Sbjct: 611 --PEGRQRTPYLAVGCEDQTVRIISLDPESTLETISLQALTAPPSAICIADMLDASINKA 668
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
P +V GL+NG+LLR + PI+ +T
Sbjct: 669 QP---------TMFVNIGLQNGVLLR--------------TVLDPINGQLTDTR------ 699
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
TR +G P+ LV + ++ALS R WL T ++ +
Sbjct: 700 --------------------TRFLGTRPIKLVRVLIHKHPAILALSSRSWLNYTYQNFMH 739
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + ++ +A + P+G++ ++ + L +
Sbjct: 740 FTPLIYENLDYAWSFSAELSPEGLIGISGSVLRI 773
>gi|68531971|ref|XP_723667.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478038|gb|EAA15232.1| Drosophila melanogaster CG13900 gene product [Plasmodium yoelii
yoelii]
Length = 1235
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 180/459 (39%), Gaps = 109/459 (23%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRT 514
L I +++PI+DM ++D + Q++A CG P SLRI++ G+S+E+L L
Sbjct: 395 LYLVDQIYSLSPIVDMKILDAKNSNLPQIYALCGRGPRSSLRILQHGLSIEELANNELPG 454
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
P Y WTV+ S Y ++++SF T +L +G +V DS+ +V T+
Sbjct: 455 KPRY-----IWTVKKDNSSEYDGYIIVSFEGNTLILEIGETVEEVYDSL-LLTNVTTIHI 508
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIV 633
L+ D +Q++ +R H G + W P++ I+ + I+V
Sbjct: 509 NLLYDNSFIQVYDTGIR--------HING-----KIVQEWIPPKNKQINAATSNGSQIVV 555
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNS 693
S S ++ + SH + E+ + E+ C+SI Q + ++S
Sbjct: 556 SLSGGELIYF----EIDESH-TLTEIFRKNINVEILCLSIQQIQQNKLRAS--------- 601
Query: 694 SVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQD 753
+G V +LS + + L+ + +L N PQD
Sbjct: 602 -------------FLAVGCLDNVVRLLSIEKDQYFKQLS--TYILPNNSS-------PQD 639
Query: 754 VRLV----LADQ-----FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTEN 804
+ + L +Q Y+ GL G+LLR + PI T N
Sbjct: 640 ICISEMKELGNQKEHTILYLNIGLNTGVLLR--------------SVIDPICGTLSNH-- 683
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA 864
++ +G V + + + + ++ LS++ +L
Sbjct: 684 ------------------------YSKYLGAKSVKICHVQVNKNPALLVLSEKTYLCYVY 719
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ Y+ +++ +A+ S +C G + ++ NSL +
Sbjct: 720 QGKYIYSPLNYDVLEYASSFYSEQCSDGYVAISGNSLRI 758
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPW 98
K + + + +G+ P ++++V K +EL+ + G + + + VFG I+ L +
Sbjct: 11 KPTAITRTVYGNFSGPKAHEIVVAKGQVLELLRADKQGKLNVIVSKDVFGIIRSLEIF-- 68
Query: 99 NKKFNAQNSQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGR 156
+++G KD + + SDSG+L L + +E + F V G R G
Sbjct: 69 ---------RLLGSNKDYIAIGSDSGRLVILKYDDEKNDFIRVHCETYGKSGIRRIIPGE 119
Query: 157 MLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
+A+D G + + A E + ++ L+ + ++
Sbjct: 120 YIAIDPKGRALMLCAIEKQKFVYILNRDNKENL 152
>gi|195428692|ref|XP_002062402.1| GK16677 [Drosophila willistoni]
gi|194158487|gb|EDW73388.1| GK16677 [Drosophila willistoni]
Length = 1273
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 440 LVLVDELPSFAPIVTSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 498
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ +V D + +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 499 GNPNAVWTVKKRVDDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLCCAALG 557
Query: 579 DGLLVQIHQNAVR 591
D LVQ++ + +R
Sbjct: 558 DDALVQVYPDGIR 570
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 11/150 (7%)
Query: 28 RNIHYLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQA 85
R I YL L KG+ V HG+ +V+ + S+EL+ + G V ++
Sbjct: 43 RFIMYLYNLTLQKGTGVTHAIHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTE 102
Query: 86 VFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLS 145
+FG I+ L F KD +VV SDSG++ L + + V Q
Sbjct: 103 IFGCIRALM------SFRLTGGT---KDYIVVGSDSGRIVILEYIPAKNALEKVHQETFG 153
Query: 146 NPGNSRHQLGRMLAVDSSGCLIAVSAYEDR 175
G R G+ A+D G + + A E +
Sbjct: 154 KTGCRRIVPGQYFAIDPKGRAVMIGAVEKQ 183
>gi|124806507|ref|XP_001350742.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium
falciparum 3D7]
gi|23496869|gb|AAN36422.1|AE014849_41 splicing factor 3b, subunit 3, 130kD, putative [Plasmodium
falciparum 3D7]
Length = 1329
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 29/231 (12%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRT 514
L I +++PILDM ++D + Q++ CG P SLRI++ G+S+E+L L
Sbjct: 427 LYLVDQIYSLSPILDMKIIDAKNTHTPQIYTLCGRGPRSSLRILQHGLSIEELADNELPG 486
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
P Y WT++ Y ++V+SF T +L +G + +V+D++ +V TL
Sbjct: 487 KPKY-----IWTIKKDNLSEYDGYIVVSFEGNTLILEIGESVEEVSDTLLLN-NVTTLHI 540
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIV 633
++ D +Q++ +R H G V W P++ I + + I++
Sbjct: 541 NILYDNSFIQVYDTGIR--------HING-----KVVQEWVAPKNKQIKAASSNSSQIVI 587
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS 684
S S ++ + SH + E+ L E+ C+SI Q P R +++
Sbjct: 588 SLSGGELIYF----EIDESH-TLVEIFRKNLNVEVLCLSIQQIPPNRVRAN 633
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPW 98
K + + + +G+ P ++++ K +EL+ + G + + + +FG I+ ++
Sbjct: 11 KPTAITKTVYGNFSGPRFHEIIVAKGQVLELLRSDKQGKLNVIISKDIFGIIRSISTF-- 68
Query: 99 NKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRML 158
+ N KD +V+ SDSG+L L + NE + F V G R G +
Sbjct: 69 --RLTGSN-----KDYIVIGSDSGRLVILEYNNEKNDFVRVHCETYGKTGIRRIIPGEYI 121
Query: 159 AVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
AVD G + + A E + ++ L+ + ++
Sbjct: 122 AVDPKGRALMICAVEKQKFVYILNRDNKENL 152
>gi|340381612|ref|XP_003389315.1| PREDICTED: DNA damage-binding protein 1-like [Amphimedon
queenslandica]
Length = 1142
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 447 GDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLR 500
GD ++K E G + + NI PILDMSVVD + RD + C G+ +G+LR
Sbjct: 329 GDSQLVKLSSSPLENGGYIDVLESMTNIGPILDMSVVDLDKQGRDVLVCCSGLGKDGALR 388
Query: 501 IIRSGISLEKLLRTAPI-YQGITGTWTVR-MKVSDPYHSFLVLSFVEETRVLRVGLNFTD 558
I++SGI + + A I GI G W+++ D +VL+FV +T LR+ +
Sbjct: 389 IVKSGIGINE---AASIDLPGIKGIWSLKCAGREDELDDTVVLTFVGQTMALRLAGEEVE 445
Query: 559 VTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEH 618
T+ D T C V ++QI +VRL + +C P+
Sbjct: 446 ETELPALVTDQQTFYCSNVTGNAIIQITTKSVRLMDDKAMEL---------ICDWSPPDG 496
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
IS A + ++V+ C L+ L V+ S E+ + H + E++C+ I
Sbjct: 497 RGISTAACNSSQVMVAVG--CDLYYLEVKPGSPG--ELLLISHTTMSHEVACLDI 547
>gi|312072035|ref|XP_003138882.1| hypothetical protein LOAG_03297 [Loa loa]
gi|307765956|gb|EFO25190.1| hypothetical protein LOAG_03297 [Loa loa]
Length = 1197
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 172/452 (38%), Gaps = 96/452 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L + +++P++ + D +E Q++ G +++++R+G+ + ++ + +
Sbjct: 396 LAVVDQMDSLSPLISSYIDDLANEDSPQIYTLIGRGALSAVKVLRNGLEVTEMA-VSELP 454
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + D + S +V+SFV T VL +G +VTDS GF TL C L+
Sbjct: 455 GNPNAVWTVKRNIDDKFDSHIVVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLGCALIG 513
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
D L+Q++ + +R I V P +I A+ + ++ +
Sbjct: 514 DDALLQVYPDGIR-----------HIRADRRVNEWKAPGKRTIMKCALNRRQVAIALAGG 562
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ EL ++ ERR+ + + +S S +
Sbjct: 563 ELVYF-----------------------ELDVTGQLNEYTERRELPADVLCMSLSEI--- 596
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCIP 751
P G + +G +V ++S P++ L L+ SI++ GT
Sbjct: 597 PEGELRSRFLTVGLADKTVRIISLDPQDCLSPLSMQALPSEPESIIVLEMFGTETQS--- 653
Query: 752 QDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAA 811
A ++ GL+NG LLR
Sbjct: 654 -------ASTVHLNIGLQNGCLLR------------------------------------ 670
Query: 812 TSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYT 871
T+ + EL N TR +G V L + ++A S R WLL + T
Sbjct: 671 TTVDQVTGELTDN----RTRYLGTKSVKLFHVRIQSKDAIMAASSRAWLLYDYQSRFHLT 726
Query: 872 SISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+S+ A S +CP+GI+ +AEN+L +
Sbjct: 727 PLSYAALEFAAGFSSEQCPEGIVAIAENTLRI 758
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 12/161 (7%)
Query: 32 YLAKCVLKGSVVL-QVAHGHLRS-PTSNDVVFGKETSIELVIIG-EDGIVQSVCEQAVFG 88
YL L+GS + Q HG P +V + ++L+ + G + +C FG
Sbjct: 2 YLYNLTLQGSSAINQAIHGSFCGLPKQQEVCIARGNLLQLLFCDPKTGKIHILCSHNAFG 61
Query: 89 TIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
I+ L KD +VV SD+G++ L + + F V Q G
Sbjct: 62 IIRSLLAFRLTGG---------TKDYIVVGSDAGRIVILEYNTQKVCFERVHQETFGKTG 112
Query: 149 NSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
R G+ LA+D G I + A E + ++ ++ + +++
Sbjct: 113 CRRIVPGQFLAIDPKGRAILIGAVERQKLVYIMNRDASANL 153
>gi|325186344|emb|CCA20849.1| predicted protein putative [Albugo laibachii Nc14]
Length = 1148
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 109/237 (45%), Gaps = 29/237 (12%)
Query: 446 MGDGMVLKEENGRLVYTSPIQ------NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
GD ++K + R S I+ NI PI+D V+D + + Q+ C G +GSL
Sbjct: 320 FGDSQLVKLNSKRDESGSYIEVLDSYVNIGPIIDFCVMDLDRQGQGQIVTCSGADKDGSL 379
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
R+IR+GI + + + + GI G W +R ++ Y +LV S++ E R++ +G +D
Sbjct: 380 RVIRNGIGINE--QASAELPGIKGMWALRESLASEYDKYLVQSYLNEIRIMTIG--DSDE 435
Query: 560 TDSVGFRP--DVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-P 616
+ V D TL C V + +Q+ + VR+ + +C W P
Sbjct: 436 MEEVEIEAFLDAKTLYCRNVNEDGWLQVTETEVRIIDAQTTS----------ICCGWIPP 485
Query: 617 EHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
I++ + I+++TS+ ++ + + ++ E ++ E++CI +
Sbjct: 486 PSTRITVASANPTQIVLATSSKVLIY------MEILDKQLMEKARKEMEFEIACIDL 536
>gi|170083859|ref|XP_001873153.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650705|gb|EDR14945.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1213
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 180/454 (39%), Gaps = 98/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDY-HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
LV ++++ PILD V++ + Q+FA CG + R +R G+ +E+ + +
Sbjct: 409 LVVADELESLDPILDSKVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEESVSSD-- 466
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT + DP+ S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 467 LPGIPNAVWTTKRTEDDPFDSYIILSFVNGTLVLSIGETIEEVQDT-GFLSSAPTLAVQQ 525
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H + +R + + +P IVS +
Sbjct: 526 IGADALLQVHPHGIRHVLADRRVNEWRVP----------------------QGKTIVSAT 563
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
++ + S + ++E + L +L+ ++ +R+ S + +S V
Sbjct: 564 TNKRQVVVALSSAELVYFE------LDLDGQLN------EYQDRKAMGSTVLALSIGDV- 610
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGC 749
P G +G +V ++S P+ L ++ +I + + + +I+
Sbjct: 611 --PEGRQRTPYLAVGCEDQTVRIISLDPETTLETISLQALTAPPSAICIADMLDASINKS 668
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
P +V GL+NG+LLR + PI+ +T
Sbjct: 669 QP---------TMFVNIGLQNGVLLR--------------TVLDPINGQLTDTR------ 699
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
TR +G P+ LV + + ++ALS R WL T ++ +
Sbjct: 700 --------------------TRFLGTRPIKLVRVQIQRNPGILALSSRSWLNYTHQNLMH 739
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + + +A + P+G++ +A + L +
Sbjct: 740 FTPLIYDNLDYAWSFSAELSPEGLIGIAGSVLRI 773
>gi|392593521|gb|EIW82846.1| hypothetical protein CONPUDRAFT_81012 [Coniophora puteana
RWD-64-598 SS2]
Length = 1213
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 175/455 (38%), Gaps = 100/455 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVD-YHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
L I+++ PILD V++ + Q+F CG + R++R G+ +E+ + +
Sbjct: 409 LALADEIESLDPILDAKVMNILPNSDTPQIFTACGRGSRSTFRMLRHGLEVEESVSSE-- 466
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT + DPY S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 467 LPGIPNAVWTTKRTEDDPYDSYIILSFVNGTLVLSIGETIEEVQDT-GFLSSAPTLAVQQ 525
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVST 635
+ L+Q+H +R LS W P+ +I ++V+
Sbjct: 526 IGSDALLQVHPQGIRHV------------LSDRRVNEWRVPQGKTIVCATTNKRQVVVAL 573
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
S+ ++ + L +L+ E + + S V SV
Sbjct: 574 SSAELVYF-----------------ELDLDGQLN---------EYQDWKAMGSTVLALSV 607
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISG 748
+P G +G +V ++S P+ L ++ +I + + + +I+
Sbjct: 608 GEVPEGRQRTPYLAVGCEDQTVRIISLDPESTLETISLQALTAPPSAICIADMLDASINK 667
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
P +V GL+NG+LLR + PI+ +T
Sbjct: 668 SQP---------TMFVNIGLQNGVLLR--------------TVLDPINGQLTDTR----- 699
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
TR +G P+ LV ++ + ++ALS R WL T + +
Sbjct: 700 ---------------------TRFLGTRPIRLVRVTVQKNPGILALSSRSWLNYTHQSLM 738
Query: 869 AYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + F+ +A + P+G++ + + L +
Sbjct: 739 HFTPLIFENLDYAWSFSAELSPEGLIGITGSVLRI 773
>gi|428180158|gb|EKX49026.1| hypothetical protein GUITHDRAFT_68305 [Guillardia theta CCMP2712]
Length = 1202
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 76/137 (55%), Gaps = 10/137 (7%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRT 514
L+ +++++PILDM V+D E+ Q++A CG P +LR +R G+++ ++ L +
Sbjct: 393 LLLVDEMESLSPILDMRVLDLAGEETPQIYALCGKGPRSTLRTLRHGLAVAEMAVSELPS 452
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
P+ WTV+ D ++V++F T VL +G +VTDS GF TL+
Sbjct: 453 NPL-----AVWTVKGSSKDAADKYIVVTFANATIVLSIGDTVEEVTDS-GFLATNKTLSV 506
Query: 575 GLVADGLLVQIHQNAVR 591
L+ D L+Q+H N +R
Sbjct: 507 SLLGDDSLLQVHPNGLR 523
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 15/147 (10%)
Query: 46 VAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQ 105
A+G+ +P +++V ++EL+ ++G +QS+C+ FG I+ +A F
Sbjct: 17 TAYGNFSAPKQHEIVISHGKTLELIRPDQNGKIQSICQMECFGLIRSMA------SFRLP 70
Query: 106 NSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS---RHQLGRMLAVDS 162
S KD LV+ +DSG++S L F E ++F +VHL G S R G+ LA D
Sbjct: 71 GSN---KDYLVLGADSGRISVLEFSKERNQF---ERVHLETYGKSGCRRIVPGQFLASDP 124
Query: 163 SGCLIAVSAYEDRLGLFSLSMSSGSDI 189
G + +SA E + ++ + + S +
Sbjct: 125 KGRAVMISAIEKQKLVYVFNRDASSKL 151
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 39/142 (27%)
Query: 762 FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDEL 821
++ AGL NG+L+R +V PI ++ FR
Sbjct: 660 LFLFAGLENGVLMRI----------TVDPITGQLAPEFR--------------------- 688
Query: 822 PINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHA 881
TR +G PV L + ++ALS R WL + T +S++ +A
Sbjct: 689 --------TRFLGTKPVKLFKVLVQEQPAVLALSSRSWLAYNFQGRYQITPLSYETLEYA 740
Query: 882 TPVCSVECPKGILFVAENSLNL 903
+ S +CP+G + VA N+L +
Sbjct: 741 SGFASDQCPEGFVCVAANTLRI 762
>gi|156095699|ref|XP_001613884.1| Splicing factor 3B subunit 3 [Plasmodium vivax Sal-1]
gi|148802758|gb|EDL44157.1| Splicing factor 3B subunit 3, putative [Plasmodium vivax]
Length = 1230
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 95/458 (20%), Positives = 180/458 (39%), Gaps = 107/458 (23%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRT 514
L + +++PILDM V+D + Q++A CG P SLRI++ G+S+E+L L
Sbjct: 395 LFLIDQVYSLSPILDMKVIDAKNASSPQIYALCGRGPRSSLRILQHGLSIEELADNELPG 454
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
P + WT++ + Y ++++SF T +L +G +V DS+ +V T+
Sbjct: 455 RPKF-----IWTIKKDNASDYDGYIIVSFEGSTLILEIGETVEEVVDSL-LLTNVTTIHV 508
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
++ D L+Q+H +R H G V W P + I +
Sbjct: 509 NILYDNSLIQVHDAGIR--------HING-----KVIHEWVPP---------KNKQIKAA 546
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHM------RLQSELSCISIPQKHPERRKSSSPIS 688
TSN C ++ + + ++EI E + L E C+SI Q + +++
Sbjct: 547 TSN-CAQIVISLSGGELLYFEIDESHTLVETFRKNLNVETLCLSIQQVQENKLRAN---- 601
Query: 689 LVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISG 748
+G V +LS ++ L+ + +L N +A
Sbjct: 602 ------------------FLAVGCLDNVVRLLSIEKEKYFNQLS--TFILPNN-SSAQDI 640
Query: 749 CIPQDVRLVLADQ---FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENI 805
CI + L + ++ GL NG+LLR + PI+ T N
Sbjct: 641 CITEMSELGNDKERKLLFLNIGLNNGVLLR--------------SVVDPITGTLTNH--- 683
Query: 806 RSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTAR 865
++ +G V + P+ +A ++ L ++ +L +
Sbjct: 684 -----------------------YSKYLGAKNVKICPVHVKKNAALLVLCEKTYLCYVHQ 720
Query: 866 HSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
Y+ +++ +A+ S +C G + ++ +SL +
Sbjct: 721 GKYIYSPLNYDILEYASSFHSEQCSDGYVAISGSSLRI 758
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPW 98
K + + ++A+G+ P +++V K +EL+ + G + + + +FG I+ L
Sbjct: 11 KPTAITKIAYGNFSGPKVHEIVVSKGQVLELLRADKQGKLNLIASKDIFGIIRCL----- 65
Query: 99 NKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRML 158
+ F S KD +V+ SDSG+L+ L F NE + F V G R G +
Sbjct: 66 -QTFRLTGSN---KDYVVIGSDSGRLTILQFSNEKNDFVRVHCETYGKSGLRRIIPGEYI 121
Query: 159 AVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
AVD G + + A E + ++ L+ + +
Sbjct: 122 AVDPKGRALMICAIERQKFVYILNRDTKEQL 152
>gi|194901554|ref|XP_001980317.1| GG19434 [Drosophila erecta]
gi|190652020|gb|EDV49275.1| GG19434 [Drosophila erecta]
Length = 1140
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 124/263 (47%), Gaps = 26/263 (9%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMV--LKEENGRLVYTSPIQN---IAPILDMSVVDYHD 481
P C + +++ FL GD + L E Y P++N +APILD++VVD
Sbjct: 310 PEC--ITYLDNGFLYIGARHGDSQLVRLNSEAIDGSYVVPVENFTNLAPILDIAVVDLDR 367
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSD-PYHSFLV 540
+ + Q+ C G +GSLRIIR GI +++ GI G W++++ V + PY + LV
Sbjct: 368 QGQGQIITCSGSFKDGSLRIIRIGIGIQE--HACIDLPGIKGMWSLKVGVDESPYENTLV 425
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
L+FV TR+L + + T+ GF D+ T C V L+Q+ ++VRL A
Sbjct: 426 LAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSVRLVSSATKA- 484
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQ 660
+ W P S+G V+ N + ++ C LF + + + + E
Sbjct: 485 ---------LVAEWRPTG-DRSIGVVSCNTTQIVVASACDLFYIVIEDGT-----LREQS 529
Query: 661 HMRLQSELSCISIPQKHPERRKS 683
L+ E++C+ I ++KS
Sbjct: 530 RRTLEYEVACLDITPLDETQKKS 552
>gi|409075182|gb|EKM75565.1| hypothetical protein AGABI1DRAFT_64324 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1213
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 184/454 (40%), Gaps = 98/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDY-HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
L ++++ PI+D V++ + Q+FA CG SLR ++ G+ +E+ + +
Sbjct: 409 LALADELESLDPIIDSKVLNLLPNSDTPQIFAACGRGARSSLRTLQHGLEVEESVSSD-- 466
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT + DPY S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 467 LPGIPNAVWTTKRNEDDPYDSYIILSFVNGTLVLSIGETIEEVQDT-GFLSSAPTLAVQQ 525
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H + +R + + +P ++ I+ +T+
Sbjct: 526 IGSDALLQVHPHGIRHVLADRRVNEWRVP---------------------SNKTIVAATT 564
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
N + + +LS + +E+ L +L+ ++ +R+ S + +S V
Sbjct: 565 NKRQVVV----ALSSAELVYFELD---LDGQLN------EYQDRKAMGSTVLALSIGDV- 610
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGC 749
P G +G +V ++S P+ L ++ +I + + + +I+
Sbjct: 611 --PEGRQRTPYLAVGCEDQTVRIISLDPESTLETISLQALTAPPSAICIADMLDASINKA 668
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
P +V GL+NG+LLR + PI+ +T
Sbjct: 669 QP---------TMFVNIGLQNGVLLR--------------TVLDPINGQLTDTR------ 699
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
TR +G P+ LV + ++ALS R WL T ++ +
Sbjct: 700 --------------------TRFLGTRPIKLVRVLIHKHPAILALSSRSWLNYTYQNFMH 739
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + ++ +A + P+G++ ++ + L +
Sbjct: 740 FTPLIYENLDYAWSFSAELSPEGLIGISGSVLRI 773
>gi|194741158|ref|XP_001953056.1| GF17579 [Drosophila ananassae]
gi|190626115|gb|EDV41639.1| GF17579 [Drosophila ananassae]
Length = 1140
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 194/486 (39%), Gaps = 104/486 (21%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMVLKEENGRL--VYTSPIQN---IAPILDMSVVDYHD 481
P C + +++ FL GD +++ + + Y P++N +APILD++VVD
Sbjct: 310 PEC--ITYLDNGFLYIGARHGDSQLVRLSSDAIDGSYVIPVENFTNLAPILDIAVVDLDR 367
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSD-PYHSFLV 540
+ + Q+ C G +GSLRIIR GI +++ GI G W++++ + D PY + LV
Sbjct: 368 QGQGQIITCSGSFKDGSLRIIRIGIGIQE--HACIDLPGIKGMWSLKVGIDDSPYENTLV 425
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
L+FV TR+L + + T+ GF D+ T C V ++Q+ ++VRL
Sbjct: 426 LAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCANVEHDQIIQVTSDSVRLVKSA---- 481
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHN--MIIVSTSNPCFLFILGVRSLSVSHYEIYE 658
+ + W PE S+G V+ N I+V+++ F + + ++ E
Sbjct: 482 ------TKDLVAEWRPEG-DRSIGVVSCNSTQIVVASARDIFYIV-------IEDGKLVE 527
Query: 659 MQHMRLQSELSCISI-PQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSV 717
L E++C+ I P + + + L ++ S L S+
Sbjct: 528 KSRKTLAYEVACLDITPLDESQNKSDLVAVGLWTDISAVIL-----------------SL 570
Query: 718 EVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFE 777
L + E L SG I+ + + T G Y+L L +G + F
Sbjct: 571 PELETIYTEKL----SGEIIPRSILMTTFEGI------------HYLLCALGDGSMYYF- 613
Query: 778 WPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITP 837
I + + + + G T+ L R T
Sbjct: 614 -------------IMDQTTGQLTDKKKVTLGTQPTT-------------LRTFRSFATTN 647
Query: 838 VFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVA 897
VF A SDRP ++ ++ H L +++++ + H + + P +
Sbjct: 648 VF-------------ACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALAT 694
Query: 898 ENSLNL 903
+NS+ L
Sbjct: 695 KNSVIL 700
>gi|340367935|ref|XP_003382508.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Amphimedon
queenslandica]
Length = 1160
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ +++++PI+ + D +E Q++A CG P SLR++R G+ + + + + +
Sbjct: 394 LILVDEMESLSPIMSCQIADLANEDTPQLYAACGRGPRSSLRVLRHGLEVTE-MAVSELP 452
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + + S++V+SF+ T +L +G +VTDS GF TLAC +
Sbjct: 453 GNPHAVWTVKKDSKEDFDSYIVVSFMNATLILSIGETVEEVTDS-GFLGTTPTLACSQLG 511
Query: 579 DGLLVQIHQNAVR 591
D L+QI+ +R
Sbjct: 512 DDALIQIYPEGIR 524
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 30 IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFG 88
+H A + K S + HG+ + +VV + +EL+ + G V + VFG
Sbjct: 1 MHLYALTLQKPSCITAAVHGNFSGRKAQEVVVARGKVLELLRPDPNTGKVVELVSTEVFG 60
Query: 89 TIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
I+ L F S KD +V+ SDSG++ L + + F V Q G
Sbjct: 61 LIRSLIT------FRLTGST---KDYIVLGSDSGRIVILEYDPVKNVFEKVHQETYGKSG 111
Query: 149 NSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGS 187
R G+ LAVD G + + A E + ++ L+ S +
Sbjct: 112 CRRIVPGQYLAVDPKGRALMIGAVEKQKLVYILNRDSAA 150
>gi|348681092|gb|EGZ20908.1| hypothetical protein PHYSODRAFT_259403 [Phytophthora sojae]
Length = 1137
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 188/469 (40%), Gaps = 86/469 (18%)
Query: 446 MGDGMVLK-----EENGRLVYT-SPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
GD ++K +ENG + N+ PI+D V+D + + Q+ C G +G+L
Sbjct: 320 FGDSQLIKLNADRDENGSYIEVLDTYVNVGPIIDFCVMDLDRQGQGQIVTCSGADKDGTL 379
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
R+IR+GI + + + + GI G W +R + + +L+ S+V E R+L +G
Sbjct: 380 RVIRNGIGINE--QASAELPGIKGMWALRETFAAEHDKYLLQSYVSEIRILAIGDEDEME 437
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHV 619
+ +V TL C + + +Q+ ++ VRL T ++ S P P
Sbjct: 438 EKEIPAFTNVKTLLCRNMYGDVWLQVTESEVRLISCTSLSLS---STWSP------PLGS 488
Query: 620 SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPE 679
I++ A + V+TS ++ L V + ++ E ++++ E++C+ I P
Sbjct: 489 RITVAAANPTQVAVATSGGVLVY------LEVENGQVTEKTKVKMEHEIACVDIT---PL 539
Query: 680 RRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRP-SVEVLSFVPKEGLRVLASGSIVL 738
R ++ + S + V+G SV VL E L
Sbjct: 540 ARSQATDGDVAMTGSSTHWDMAALNSSICVVGLWTNFSVSVLKLPTLEKLT--------- 590
Query: 739 TNTMGTAISGCIPQDVRLVLADQF----YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSP 794
T ++GT + +P R VL + F Y+L GL +G L+ +E
Sbjct: 591 TESLGTDL---LP---RSVLCNTFEGKDYLLVGLGDGSLMNYEL---------------- 628
Query: 795 ISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIAL 854
N+ G T S P++L R +T VF A
Sbjct: 629 ---------NVAQGTLGTRKRVSLGSQPLSLSTF--RSKNMTHVF-------------AA 664
Query: 855 SDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
DRP ++ ++ + L Y++I+ + P S P+ + +E L +
Sbjct: 665 CDRPTVIYSSNNKLLYSNINSKEVNVMCPFDSESFPECLALSSEEELTI 713
>gi|156389050|ref|XP_001634805.1| predicted protein [Nematostella vectensis]
gi|156221892|gb|EDO42742.1| predicted protein [Nematostella vectensis]
Length = 1157
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 163/449 (36%), Gaps = 104/449 (23%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+DM VVD + + Q+ C G EGSLRIIR+GI + + GI G W
Sbjct: 354 NLGPIVDMVVVDLERQGQGQLVTCSGAKKEGSLRIIRNGIGIHE--HATIDLAGIMGIWA 411
Query: 527 VRM-KVSDPYHSFLVLSFVEE---------TRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
+++ K Y LVLSFV + +RVL + + T+ GF D T G
Sbjct: 412 LKLRKTQQEYDDTLVLSFVGQSRRVLCTIHSRVLSLSGEEVEETEIPGFSDDQQTYYSGN 471
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVST 635
V L+Q+ +VRL + + + W P +IS+ + ++ +
Sbjct: 472 VTGAQLIQVTAASVRLVNCE----------TRQLVSEWKHPSAKNISVASCNTEQVVAAV 521
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI-PQKHPERRKSSSPISLVSNSS 694
+ + + + E+ ++ + L+ E++C+ I P + R + L ++ S
Sbjct: 522 GSELYY-------IEIMPGELRQISQVTLEYEVACLDITPTVEGKSRADMVAVGLWTDIS 574
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV 754
V L P + L + G I+ + + TA G
Sbjct: 575 VRVL--------------QLPKLNQLHV-------QMLGGEIIPRSILKTAFEGI----- 608
Query: 755 RLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSS 814
Y+L L +G L F P + + +
Sbjct: 609 -------HYLLCALGDGTLFYFTMDPSTGALAECKKV----------------------- 638
Query: 815 FESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSIS 874
+G P L ++ A SDRP ++ ++ H L +++++
Sbjct: 639 -----------------TLGTQPTMLRTFKSLSTVNVFACSDRPTVIYSSNHKLVFSNVN 681
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
+ P+ S P + + SL +
Sbjct: 682 LKEVNFMCPLNSQGYPDSLALANDGSLTI 710
>gi|392570042|gb|EIW63215.1| hypothetical protein TRAVEDRAFT_161375 [Trametes versicolor
FP-101664 SS1]
Length = 1213
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 91/454 (20%), Positives = 187/454 (41%), Gaps = 98/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDY-HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
L ++++ PI+D V++ + Q+F CG + R +R G+ +E+++ +
Sbjct: 409 LTLVDELESLCPIIDSKVMNLLPNSDTPQIFTACGRGARSTFRTLRHGLEVEEVVSSD-- 466
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT ++K D Y S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 467 LPGIPNAVWTTKLKEDDLYDSYIILSFVNGTLVLSIGETIEEVQDT-GFLSSAPTLAVQQ 525
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ L+Q++ + +R + + +P + I+ +T+
Sbjct: 526 IGADALLQVYPHGIRHVLADRRVNEWKVP---------------------SGKTIVCATT 564
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
N + + +LS + +E+ L +L+ ++ +R+ S + + SV
Sbjct: 565 NKRQVVV----ALSSAELVYFELD---LDGQLN------EYQDRKAMGSTVLAL---SVA 608
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGC 749
+P G +G +V ++S P+ L ++ +I + + + +I+
Sbjct: 609 EVPEGRQRTPYLAVGCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADMLDASINKS 668
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
P +V GL+NG+LLR + P++ +T
Sbjct: 669 QPTT---------FVNIGLQNGVLLR--------------TVLDPVNGQLTDTR------ 699
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
TR +G P+ L+ ++ + ++ALS RPWL T ++ +
Sbjct: 700 --------------------TRFLGTRPIRLLRVNIQQNPAILALSSRPWLNYTYQNFMH 739
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + F+ +A + C +G++ ++ + L +
Sbjct: 740 FTPLIFENLDYAWSFSAELCTEGLIGISGSLLRI 773
>gi|328770638|gb|EGF80679.1| hypothetical protein BATDEDRAFT_11194 [Batrachochytrium
dendrobatidis JAM81]
Length = 1098
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+API D VVD + + Q+ AC G +GS+RIIR+GI +E++ + + + +TG W
Sbjct: 348 NLAPISDFCVVDIEKQGQAQIVACSGAQRDGSIRIIRNGIGVEEIGQLDDMEE-LTGVWA 406
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVG-FRPDVCTLACGLVADGLLVQI 585
++ + + + LVLSF+ ETR+ ++ + D +G F+ TL C ++ ++VQI
Sbjct: 407 LKPYSAARHDNVLVLSFIGETRLQKLDGDSMAEMDMLGNFKTAERTLWCQNLSSDMVVQI 466
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCF-LFI 643
++ T++ G + W F S++ +V NMI+VS LF
Sbjct: 467 TSQSI-----TILTIEG-----WTTVAEWCFDLGASVTHASVYQNMILVSLGGGMIHLFE 516
Query: 644 LGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
R L + + +++Q E+SC+ I
Sbjct: 517 FNDRELVMK-------RSIQIQVEVSCLHI 539
>gi|164656549|ref|XP_001729402.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
gi|159103293|gb|EDP42188.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
Length = 1207
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 172/451 (38%), Gaps = 89/451 (19%)
Query: 464 PIQNIA---------PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
P+ N+A P+LD V + Q++A CG S + +R G+ + +++ +
Sbjct: 406 PLDNLALAYELDALDPLLDAKVSNPLHSDVPQIYAACGRGARSSFKRLRHGLEVSEVVSS 465
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
G+ W+ +++ SD Y ++VLSFV T VL +G +V DS GF TLA
Sbjct: 466 D--LPGVPEAVWSTKLRSSDQYDGYIVLSFVNGTLVLSIGETIEEVEDS-GFLTTERTLA 522
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIV 633
+ L+Q+H +R + + + P C P I+
Sbjct: 523 VQQLGTDALLQVHPRGIRHILSNKQVNE----WTTPSCQDGSP------------TQIVA 566
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNS 693
+T+N + +L + S + ++E + + +L+ + ERR + I +
Sbjct: 567 ATTNERQV-VLALDSQEIVYFE------LDMDGQLN------EFQERRDIEADIVAL--- 610
Query: 694 SVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQD 753
S+ A P G I +V ++S P LA S+ ++IS C D
Sbjct: 611 SISACPEGSQRTPYVAIACADQTVRIVSLDPDS---TLAPMSLQALTAPPSSISVCEMLD 667
Query: 754 VRLVLAD-QFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAAT 812
L +V GL NG+ +R P +
Sbjct: 668 ASLDRHHLTMFVCIGLANGVYIRTVLDPSTG----------------------------- 698
Query: 813 SSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTS 872
L TR +G PV LV D M+ALS R WL T L +T
Sbjct: 699 -----------QLTDTRTRFLGGRPVRLVRTQVHGDTAMMALSTRSWLAYTLHSHLHFTP 747
Query: 873 ISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ + TH + + CP G+L + N+L +
Sbjct: 748 LMLEALTHVSTFHTELCPDGLLGIEGNALRI 778
>gi|425768510|gb|EKV07031.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum PHI26]
gi|425775700|gb|EKV13954.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum Pd1]
Length = 1209
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 172/449 (38%), Gaps = 101/449 (22%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
+ +++P++D +++ ++ Q++ CG S R ++ G+ + +++ + + Q +
Sbjct: 417 MNSLSPLIDSKILNLSEDDAPQIYTICGSGARSSFRTLKHGLEVSEIVES-DLQQVPSAV 475
Query: 525 WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
WT ++ +D +H++++LSF T VL +G +V+D+ GF TLA + + LVQ
Sbjct: 476 WTTKLTRADEFHTYIILSFANGTLVLSIGEIVEEVSDT-GFLSSAPTLAVQQLGEDSLVQ 534
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
+H +R + + +P P+H SI A + V+ S+ ++
Sbjct: 535 VHPRGIRHILADQRVN------EWPA-----PQHRSIVAAATNERQVAVALSSGEIVYF- 582
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
E+ ++ ERR+ S ++ +S V P G +
Sbjct: 583 ----------------------EMDADGTLAEYDERRQMSGTVTSLSMGEV---PEGRMR 617
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLR------VLASGSIVLTNTMGTAISGCIPQDVRLVL 758
+G +V +LS P L + ++ S + M + SG
Sbjct: 618 SSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALQIMAMADSSSG---------- 667
Query: 759 ADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESK 818
Y+ GL +G+ LR
Sbjct: 668 GTTLYLHIGLYSGVYLR----------------------------------------TVL 687
Query: 819 DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL----LQTARHSLAYTSIS 874
DE+ L TR IG PV L +S ++ALS RPWL +QT S T +
Sbjct: 688 DEVTGELSDTRTRFIGAKPVKLSQVSVKGQTAVLALSTRPWLGYSDIQT--KSFMLTPLD 745
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
+ S +C +G++ + SL +
Sbjct: 746 YVGLEWGWNFSSEQCVEGMIGIQGRSLRI 774
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G + + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKITPLYSQDVFGIIRSLAA------FRVAGSN---KDYIIIGSDSGRITIVEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNSRHQLGRMLAVDSSG--CLIA 168
F + G R G+ LAVD G CLIA
Sbjct: 105 FNRIHMETFGKSGVRRVVPGQYLAVDPKGRACLIA 139
>gi|322700233|gb|EFY91989.1| Pre-mRNA-splicing factor rse-1 [Metarhizium acridum CQMa 102]
Length = 1039
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 16/180 (8%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L + ++AP++D ++ E Q++A CG +LRI+R G+ + +L+ + +
Sbjct: 410 LTLVESVSSMAPLMDCKILTQAGEDISQIYAACGNGARSTLRILRHGLEVNELV-ASELP 468
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WT ++ SD Y ++++L+F+ +T VL VG T VTDS GF V TLA +
Sbjct: 469 GTPSAVWTTKLTQSDDYDAYIILTFLHDTMVLSVGETVTQVTDS-GFITTVATLAVQQIG 527
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
L Q++ +R SG T W P+H +I A + ++ S+
Sbjct: 528 KNSLFQVYSKGIRHI------QSGQF-------TEWPVPQHRTIVAAATNERQVAIALSS 574
>gi|159486547|ref|XP_001701300.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158271783|gb|EDO97595.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 1078
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ + ++ PI DM V + E+ Q++A CG P SL ++R G+++ +L +P+
Sbjct: 382 LLLIDEMASLMPITDMKVANLLGEEIPQIYALCGRGPRASLSVLRPGLAVTELA-VSPLP 440
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
T WTVR SD Y +++V+SF T V +G + +S GF V TL L+A
Sbjct: 441 GAPTAVWTVRRAASDEYDAYIVVSFANATLVFSIGEEVKETNES-GFLGTVPTLHTQLLA 499
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPV-CTSWFPEHVSISL-----GAVAHNMII 632
D ++Q++ +R P + +P + + + V+I+L G + I
Sbjct: 500 DNSMLQVYPGGLRHIRPDRRINEWKVPGRRVIKAAASNDKQVAIALQGGEVGTYDQTVRI 559
Query: 633 VSTSNPCFLFILGVRSLS 650
+ST L L V++L+
Sbjct: 560 LSTDPGAGLKNLAVQALN 577
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPW 98
+ S + +G+ P + +VV + +EL+ E+G +Q+V VFG I+ LA V
Sbjct: 10 RASGIQTAVYGNFSGPKAQEVVVSRGKVLELLRPNENGKMQTVVATEVFGQIRSLAAV-- 67
Query: 99 NKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRML 158
+ + D L + SDSG++ + F + + + V Q G R G+ L
Sbjct: 68 --RLTGSTT-----DHLAIGSDSGRIVLIKFNKDKNVWVKVHQETFGRSGCRRIVPGQFL 120
Query: 159 AVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
AVD G V A E + ++ L+ + +++
Sbjct: 121 AVDPKGRACMVGAVEKQKFVYVLNRDAAANL 151
>gi|221061705|ref|XP_002262422.1| splicing factor 3b, subunit 3, 130kd [Plasmodium knowlesi strain H]
gi|193811572|emb|CAQ42300.1| splicing factor 3b, subunit 3, 130kd, putative [Plasmodium knowlesi
strain H]
Length = 1276
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/453 (20%), Positives = 178/453 (39%), Gaps = 97/453 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRT 514
L + +++PILDM ++D + Q++A CG P SLRI++ G+S+E+L L
Sbjct: 395 LFLIDQVYSLSPILDMKILDAKNANSPQIYALCGRGPRSSLRILQHGLSIEELADNELPG 454
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
P Y WT++ + Y ++++SF T +L +G +V D++ +V T+
Sbjct: 455 RPKY-----IWTIKKDNASDYDGYIIVSFEGSTLILEIGETVEEVVDTL-LLTNVTTIHV 508
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIV 633
++ D L+Q+H +R H G V W P++ + I++
Sbjct: 509 NILYDNSLIQVHDTGIR--------HING-----KVINEWVPPKNKQVKAATSNATQIVI 555
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNS 693
S S ++ + SH + E+ L E+ C+SI + + +++
Sbjct: 556 SLSGGELIYF----EIDESH-SLVEIFRKSLNVEILCLSIQEVEENKVRAN--------- 601
Query: 694 SVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQD 753
+G V +LS + KE S I+ N+ I CI +
Sbjct: 602 -------------FLAVGCLDNVVRLLS-IEKEKYFNQLSTFILPNNSSAQDI--CISEM 645
Query: 754 VRLVLADQ---FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
L + ++ GL NG+LLR + PI+ T N
Sbjct: 646 CELGNDKERKLLFLNIGLNNGVLLR--------------SVVDPITGTLTNH-------- 683
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
++ +G V + P+ + ++ L ++ +L + Y
Sbjct: 684 ------------------YSKYLGAKNVKICPVHVKKNPALLVLCEKTYLCYVHQGKYIY 725
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ +++ +A+ S +C G + ++ +SL +
Sbjct: 726 SPLNYDILEYASSFHSEQCSDGYVAISGSSLRI 758
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPW 98
K + + ++A+G+ P +++V K +EL+ + G + + + +FG I+ L
Sbjct: 11 KPTAITKIAYGNFSGPKVHEIVVSKGQVLELLRADKQGKLNLIVSKDIFGIIRCL----- 65
Query: 99 NKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRML 158
+ F S KD +V+ SDSG+L L F NE + F V G R G +
Sbjct: 66 -QTFRLTGSN---KDYVVIGSDSGRLVILQFSNEKNDFVRVHCETYGKSGLRRIIPGEYI 121
Query: 159 AVDSSGCLIAVSAYEDRLGLFSLS 182
AVD G + + A E + ++ L+
Sbjct: 122 AVDPKGRALMICAIERQKFVYILN 145
>gi|389740093|gb|EIM81285.1| hypothetical protein STEHIDRAFT_86633 [Stereum hirsutum FP-91666
SS1]
Length = 1213
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/454 (19%), Positives = 177/454 (38%), Gaps = 98/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDY-HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
L ++++AP++D V++ + Q+F CG + R +R G+ +E+ + +
Sbjct: 409 LALADELESLAPVIDSKVMNLLPNSDTPQIFTACGRGARSTFRTLRHGLEVEETVSSD-- 466
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT + + PY S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 467 LPGIPNAVWTTKTREDAPYDSYIILSFVNGTLVLSIGETIEEVQDT-GFLSSAPTLAVQQ 525
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H + +R + + +P IVS +
Sbjct: 526 IGADALLQVHPHGIRHVLADRRVNEWRVP----------------------QGKTIVSAT 563
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
++ + S + ++E + L +L+ ++ +R+ S + + S+
Sbjct: 564 TNKRQVVVALSSAELVYFE------LDLDGQLN------EYQDRKAMGSTVLAL---SIG 608
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGC 749
+P G +G +V ++S P+ L ++ ++ + + + I+
Sbjct: 609 EVPEGRQRTPYLAVGCEDQTVRIISLDPESTLETISLQALTAPPSALCIADMLDAGINKS 668
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
P +V GL+NG+LLR + P++ +T
Sbjct: 669 QP---------TMFVNIGLQNGVLLR--------------TVLDPVNGQLTDTR------ 699
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
TR +G PV L+ + ++ALS R WL T ++ +
Sbjct: 700 --------------------TRFLGTRPVRLIRVQIQHQPAILALSSRTWLNYTHQNLMH 739
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+T + F A + CP+G++ + + L +
Sbjct: 740 FTPLIFDNLDFAWSFSAELCPEGLIGITGSVLRI 773
>gi|322693432|gb|EFY85292.1| Pre-mRNA-splicing factor RSE1 [Metarhizium acridum CQMa 102]
Length = 1221
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 27/234 (11%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + P N P+LD V + E Q++ CG + R++R G+ + +++
Sbjct: 412 ENLALVESIPSMN--PLLDCQVANLTGEDAPQIYTVCGNGARSTFRMLRHGLEVNEIV-- 467
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
A GI + WT+++ + Y +++VLSF T VL +G +V+DS GF V TLA
Sbjct: 468 ASELPGIPSAVWTLKLNRGEQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFSTSVPTLA 526
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAV-AHNMI 631
L+ D L+Q+H +R V W P+H SI + AH +
Sbjct: 527 AQLLGDDGLIQVHPKGIRHVRNGKV-------------NEWDAPQHRSIVAASTNAHQVA 573
Query: 632 IVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
I +S F + S++ Y+ + + ++C+S+ + PE R SS
Sbjct: 574 IALSSGEIVYFEMDSDG-SLAEYD----EKKEMFGTVTCLSLGEV-PEGRARSS 621
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G V +V VFG I+ LA F S KD L++ SDSG+++ + + +R
Sbjct: 54 GKVTTVLSHNVFGIIRSLAA------FRLAGSN---KDYLIIASDSGRITIVEYLPAQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F +++HL G S R G LA D G CLIA
Sbjct: 105 F---SRLHLETFGKSGVRRVIPGEYLACDPKGRACLIA 139
>gi|145351726|ref|XP_001420218.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580451|gb|ABO98511.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1120
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 178/461 (38%), Gaps = 106/461 (22%)
Query: 454 EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEK 510
+++G Y ++ N+ PI+D + VD + Q+ C G +GSLR++R+GI +++
Sbjct: 360 DKDGNPTYVQILEEFTNLGPIVDFAFVDLERHGQGQVVTCSGALKDGSLRVVRNGIGIDE 419
Query: 511 LLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLR-VG--LNFTDVTDSVGFRP 567
+ G+ G +++R +LV++F+ ETR+L VG + D T+ GF
Sbjct: 420 --QAVIQLPGVKGLFSLRDSDDSQMDKYLVVTFINETRILGFVGDEGDTLDETEIAGFDA 477
Query: 568 DVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVA 627
+ TL CG + + +Q+ VRL V+ G + W P+ GA
Sbjct: 478 EAQTLCCGNMQGNVFLQVTHRGVRL-----VSRGG------DLLDEWKPKD-----GA-- 519
Query: 628 HNMIIVSTSNPCFLFILG----VRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKS 683
I+ + NP + + + L+V+ +I + ++E++C+ P
Sbjct: 520 --EILSAKCNPTQILVAAAGGQLHCLNVAKGKIVLLASKTFENEIACLDCT---PMGDGM 574
Query: 684 SSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMG 743
SSP+ V S+ + A S+ LS + KE
Sbjct: 575 SSPVCAVGLWSMDIVLA---------------SMSDLSVITKE----------------- 602
Query: 744 TAISGCIPQDVRLV-LADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNT 802
+ IP+ L D Y+ GL +G L+ + ++ S +
Sbjct: 603 STDEDIIPRSTLLCSFEDIPYLFVGLGDGQLITYVLDQNTGALSGRKKL----------- 651
Query: 803 ENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQ 862
S +K PI LQ + ++ VF A SDRP ++
Sbjct: 652 -----------SLGTK---PITLQTFKSHATNVSSVF-------------AASDRPTVIF 684
Query: 863 TARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ L Y++++ Q H P S P + + L +
Sbjct: 685 SNNKKLIYSNVNVQEVLHVCPFSSEAFPDALALAGDEDLTI 725
>gi|345563727|gb|EGX46712.1| hypothetical protein AOL_s00097g460 [Arthrobotrys oligospora ATCC
24927]
Length = 1308
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 173/446 (38%), Gaps = 81/446 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L + ++ +LD + + ++ Q++ CG S R ++ G+ + +++ ++ +
Sbjct: 511 LALMESVDSMNSLLDCQIANLTNDDAPQIYTICGANARSSFRTLKHGLEVSEIV-SSELP 569
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
G WT ++ D Y +++VLSF T VL +G +VTD+ GF TLA +
Sbjct: 570 GGPVAVWTTKLASQDEYDAYIVLSFTNGTLVLSIGETVEEVTDT-GFLSSAPTLAVQQLG 628
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ L+Q+H +R + +P P+H SI + + ++ S+
Sbjct: 629 EDGLLQVHPKGIRHIRADRRVN------EWPA-----PQHRSIVAASTNSRQVAIALSSG 677
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ EL ++ ++++ S ++ +S V
Sbjct: 678 EIVYF-----------------------ELDSDGQLAEYEDKKEMSGTVTCLSLGDV--- 711
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVL 758
P G + +G +V +LS P L S S+ + TA
Sbjct: 712 PEGKMRSSFLAVGCDDSTVRILSLDPDS---TLESKSVQALTSAPTA------------- 755
Query: 759 ADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESK 818
LR PDS A S S F + + SG+ +
Sbjct: 756 ---------------LRIMSMPDS------AGGDSQRSTLFLHI-GLYSGVYLRTVL--- 790
Query: 819 DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQT-ARHSLAYTSISFQP 877
D + L TR +G PV L +S + ++ALS +PWL T T +S+Q
Sbjct: 791 DTITGELTDTRTRFLGPQPVKLFSVSAAGTTAILALSSKPWLGYTNGSGQYLLTPLSYQS 850
Query: 878 STHATPVCSVECPKGILFVAENSLNL 903
T+ S +CP+G++ + N+L +
Sbjct: 851 LTYGCTFSSEQCPEGMVGIQGNNLRI 876
>gi|195145844|ref|XP_002013900.1| GL24391 [Drosophila persimilis]
gi|194102843|gb|EDW24886.1| GL24391 [Drosophila persimilis]
Length = 1140
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 194/485 (40%), Gaps = 102/485 (21%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMV--LKEENGRLVYTSPIQN---IAPILDMSVVDYHD 481
P C + +++ FL GD + L E+ Y P++N +APILD++VVD
Sbjct: 310 PEC--ITYLDNGFLYIGARHGDSQLVRLSSESIEGSYVIPVENFTNLAPILDIAVVDLDR 367
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSD-PYHSFLV 540
+ + Q+ C G +GSLRIIR GI +++ GI G W++++ + + PY + LV
Sbjct: 368 QGQGQIITCSGSFKDGSLRIIRIGIGIQE--HACIDLPGIKGMWSLKVGIDESPYENTLV 425
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
L+FV TR+L + + T+ GF D+ T C V L+Q+ ++VRL A
Sbjct: 426 LAFVGLTRILTLSGEEVEETEIPGFASDLQTFLCANVEHDQLIQVTSDSVRLVKSATKA- 484
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHN--MIIVSTSNPCFLFILGVRSLSVSHYEIYE 658
+ W PE S+G V+ N I+++++ F + + + E
Sbjct: 485 ---------LICEWRPEG-DRSIGVVSCNSTQIVLASARDIFYIV-------IEDGRLVE 527
Query: 659 MQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVE 718
L E++C+ I +P+ N S + G+ + VI S+
Sbjct: 528 KSRKTLAYEVACLDI-----------TPLDETQNKS-DLIAVGLWTDISAVI----LSLP 571
Query: 719 VLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEW 778
L + E L SG I+ + + T G Y+L L +G + F
Sbjct: 572 DLETIYTEKL----SGEIIPRSILMTTFEGI------------HYLLCALGDGSMYYF-- 613
Query: 779 PPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPV 838
I + + + + G T+ L R T V
Sbjct: 614 ------------IMDQTTGQLTDKKKVTLGTQPTT-------------LRTFRSFATTNV 648
Query: 839 FLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAE 898
F A SDRP ++ ++ H L +++++ + H + + P + +
Sbjct: 649 F-------------ACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATK 695
Query: 899 NSLNL 903
NS+ L
Sbjct: 696 NSVIL 700
>gi|125774475|ref|XP_001358496.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
gi|54638233|gb|EAL27635.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
Length = 1140
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 194/485 (40%), Gaps = 102/485 (21%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMV--LKEENGRLVYTSPIQN---IAPILDMSVVDYHD 481
P C + +++ FL GD + L E+ Y P++N +APILD++VVD
Sbjct: 310 PEC--ITYLDNGFLYIGARHGDSQLVRLSSESIEGSYVIPVENFTNLAPILDIAVVDLDR 367
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSD-PYHSFLV 540
+ + Q+ C G +GSLRIIR GI +++ GI G W++++ + + PY + LV
Sbjct: 368 QGQGQIITCSGSFKDGSLRIIRIGIGIQE--HACIDLPGIKGMWSLKVGIDESPYENTLV 425
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
L+FV TR+L + + T+ GF D+ T C V L+Q+ ++VRL A
Sbjct: 426 LAFVGLTRILTLSGEEVEETEIPGFASDLQTFLCANVEHDQLIQVTSDSVRLVKSATKA- 484
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHN--MIIVSTSNPCFLFILGVRSLSVSHYEIYE 658
+ W PE S+G V+ N I+++++ F + + + E
Sbjct: 485 ---------LICEWRPEG-DRSIGVVSCNSTQIVLASARDIFYIV-------IEDGRLVE 527
Query: 659 MQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVE 718
L E++C+ I +P+ N S + G+ + VI S+
Sbjct: 528 KSRKTLAYEVACLDI-----------TPLDETQNKS-DLIAVGLWTDISAVI----LSLP 571
Query: 719 VLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEW 778
L + E L SG I+ + + T G Y+L L +G + F
Sbjct: 572 DLETIYTEKL----SGEIIPRSILMTTFEGI------------HYLLCALGDGSMYYF-- 613
Query: 779 PPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPV 838
I + + + + G T+ L R T V
Sbjct: 614 ------------IMDQTTGQLTDKKKVTLGTQPTT-------------LRTFRSFATTNV 648
Query: 839 FLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAE 898
F A SDRP ++ ++ H L +++++ + H + + P + +
Sbjct: 649 F-------------ACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATK 695
Query: 899 NSLNL 903
NS+ L
Sbjct: 696 NSVIL 700
>gi|268568396|ref|XP_002640241.1| C. briggsae CBR-TAG-203 protein [Caenorhabditis briggsae]
Length = 1218
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 105/520 (20%), Positives = 195/520 (37%), Gaps = 107/520 (20%)
Query: 392 PKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSA--FVEMGDG 449
P C+ F + FG+ H+++ L +G + F SA F E
Sbjct: 335 PANALCILKAGFLFVAAEFGN--HELYQIASLGEGG--------DDEFSSAMGFGENDAA 384
Query: 450 MVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLE 509
E L+ + +++P+ D + D E Q+F G ++++R+G+ +
Sbjct: 385 FFEPHELRSLIPIDSMDSLSPLTDAVIGDIAREDAAQLFTLVGRGARSHMKVLRNGLEIS 444
Query: 510 KLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
++ + + WTV+ + D Y S++V+SFV T L +G + +DS GF P
Sbjct: 445 EMA-VSDLPGNPNAVWTVKKNIEDQYDSYIVVSFVNATLTLTIGDTVEEASDS-GFLPTT 502
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHN 629
T+ C ++ D LVQI+ +R I + P I AV
Sbjct: 503 PTIGCSMIGDDSLVQIYSEGIR-----------HIRADKRINEWKAPPRRQIVKCAVNRR 551
Query: 630 MIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISL 689
+ V+ S ++ EL + ER+ ++ I+
Sbjct: 552 QVAVALSGGELVYF-----------------------ELDLNGTLNEFTERKLFNADIAC 588
Query: 690 VSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGC 749
++ S + G + +GT +V ++S P + L L++ ++ C
Sbjct: 589 MTFSEI---SEGELNSRFLALGTVDNAVRIISLDPNDMLMPLSTQNL-----------PC 634
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISAT----FRNT-EN 804
P+ + L+ + P + VA +H I FRNT +N
Sbjct: 635 PPESILLI-------------------DTPNEDG--KGVASVHLNIGLQNGCLFRNTVDN 673
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITP-VFLVPLSDSLDADMIALSDRPWLLQT 863
+ I T TR +G P +F V + + ++ S R WLL
Sbjct: 674 VTGAIMDTR----------------TRYLGTRPKLFKVQVQGR--SAILCTSSRSWLLYH 715
Query: 864 ARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ T +S+ +A CS +C +G++ ++ ++L +
Sbjct: 716 FQRRFHLTPLSYANLEYAASFCSNQCAEGVVAISASTLRI 755
>gi|358253751|dbj|GAA53701.1| splicing factor 3B subunit 3, partial [Clonorchis sinensis]
Length = 726
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ ++N++PI+ + D+ +E Q+ CG P + R++R G+ + ++ ++ +
Sbjct: 398 LIEVDVLENLSPIMHYHIADFANEDTPQLAVLCGRGPGSTFRLLRHGLEVSEMAKS-DLP 456
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ + Y +++++SFV T VL +G +VTDS GF TL C +
Sbjct: 457 GNPNAVWTVKRNSEEEYDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLTCSQLG 515
Query: 579 DGLLVQIHQNAVR 591
D LVQ++ + +R
Sbjct: 516 DDALVQVYPDGIR 528
>gi|21357503|ref|NP_650257.1| piccolo [Drosophila melanogaster]
gi|74872881|sp|Q9XYZ5.1|DDB1_DROME RecName: Full=DNA damage-binding protein 1; Short=D-DDB1; AltName:
Full=Damage-specific DNA-binding protein 1; AltName:
Full=Protein piccolo
gi|4928452|gb|AAD33592.1|AF132145_1 damage-specific DNA binding protein DDBa p127 subunit [Drosophila
melanogaster]
gi|7299719|gb|AAF54901.1| piccolo [Drosophila melanogaster]
gi|220942640|gb|ACL83863.1| DDB1-PA [synthetic construct]
Length = 1140
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 26/263 (9%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMV--LKEENGRLVYTSPIQN---IAPILDMSVVDYHD 481
P C + +++ FL GD + L E Y P++N +APILD++VVD
Sbjct: 310 PEC--ITYLDNGFLYIGARHGDSQLVRLNSEAIDGSYVVPVENFTNLAPILDIAVVDLDR 367
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSD-PYHSFLV 540
+ + Q+ C G +GSLRIIR GI +++ GI G W++++ V + PY + LV
Sbjct: 368 QGQGQIITCSGSFKDGSLRIIRIGIGIQE--HACIDLPGIKGMWSLKVGVDESPYENTLV 425
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
L+FV TR+L + + T+ GF D+ T C V L+Q+ ++VRL A
Sbjct: 426 LAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSVRLVSSATKA- 484
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQ 660
+ W P ++G V+ N + ++ C +F + + S + E
Sbjct: 485 ---------LVAEWRPTG-DRTIGVVSCNTTQILVASACDIFYIVIEDGS-----LREQS 529
Query: 661 HMRLQSELSCISIPQKHPERRKS 683
L E++C+ I ++KS
Sbjct: 530 RRTLAYEVACLDITPLDETQKKS 552
>gi|428180132|gb|EKX49000.1| hypothetical protein GUITHDRAFT_105085 [Guillardia theta CCMP2712]
Length = 1207
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 179/456 (39%), Gaps = 109/456 (23%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRTAPIYQG 520
I++++PI+ M V+D + E Q+F CG P S+R++R G+S+ ++ L T P+
Sbjct: 401 IESLSPIVGMKVMDLYSEGNFQVFTLCGKGPRSSIRVLRHGLSVVEMAISQLPTVPV--- 457
Query: 521 ITGTWTVRMKVSDPYHSFLVLSFVE---ETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
WT++ +DP+ ++V+S +T VL +G V + G P +++ +
Sbjct: 458 --AVWTLKANSTDPHDRYIVVSLAHSSVQTLVLSIGETVEAVANH-GLLPHAKSISIATM 514
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSN 637
D ++Q+H N +++ GG + P +S N +I+S +N
Sbjct: 515 GD-CMIQVHTNGIQVM-------KGGKNIPSPFASS---------------NPVILSVNN 551
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
+ + ++ V+ Y EM+ E I+I + V V
Sbjct: 552 EQQMLV--TQTDGVTSY--LEMEGTGTLREKGKININAQE------------VCAVEVTP 595
Query: 698 LPAGVIIGYTFVIGTHRP--------SVEVLSFVPKEGLRVLAS--GSIVLTNTMGTAIS 747
L A +G ++G S++ SF G +VL + SI L +
Sbjct: 596 LSASQTLGKFAIMGAFMDNAWFLCVVSLDASSFSSVVGRQVLQARPSSIALLQSY----- 650
Query: 748 GCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRS 807
+ R F++ GL NG+L+R + ++ IS FR
Sbjct: 651 ---SRSSREPGRSVFFLYVGLENGVLMRMSFNAET----------GEISQEFR------- 690
Query: 808 GIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHS 867
TR +G PV LV + ++ALS R WL +
Sbjct: 691 ----------------------TRSLGSNPVKLVRVKVQEKEALLALSSRSWLAYHHQGK 728
Query: 868 LAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+S+ A S +CP+G + +++ SL +
Sbjct: 729 QCLDPLSYDMLDFAWNFSSQQCPEGFVCISQGSLRI 764
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 30 IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGT 89
+H + + + S + G+ ++++V +IEL+ + E G + S+C F
Sbjct: 1 MHLYSLTLQRPSAITFAVRGNFTGCGNHEIVVAHGRAIELLQVDEQGRILSLCNMECFAI 60
Query: 90 IKDLAVVPWNKKFNAQNSQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNP 147
++ +A S++ G KD + + SDSGKL+ + + + M++F V
Sbjct: 61 VRAMAA-----------SRLPGYDKDCVFLTSDSGKLAIIEYNHVMNQFERVYLETYGKS 109
Query: 148 GNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDII 190
G R G+ LA D G + + + E L F + + + ++
Sbjct: 110 GCRRMVPGQHLAADMYGRALVIGSLEKNLIGFQVQLDDANQVV 152
>gi|391335522|ref|XP_003742140.1| PREDICTED: DNA damage-binding protein 1-like [Metaseiulus
occidentalis]
Length = 1154
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ ILDM VVD + +DQ+ C G GSLRIIR+GI + +L GI G W
Sbjct: 349 NLGAILDMIVVDLEKQGQDQLITCSGQGACGSLRIIRNGIGIHEL--ACVELSGIKGIWA 406
Query: 527 VRMKVSD-----PYHSFLVLSFVEETRVLRVG--LNFTDVTDSVGFRPDVCTLACGLVAD 579
+RM + P LVLSFV +TRV VT F D T V
Sbjct: 407 LRMNTAQLEEDTPTDDTLVLSFVGQTRVFNCSSTEELEQVTLPAAFDIDSQTFCARNVLG 466
Query: 580 GLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPC 639
++Q+ V L T S WFP I + A N + V+ +
Sbjct: 467 NQVIQVTDKRVNLISVT----------SKTRVDQWFPPEGEI-ITQCACNDVQVALALKN 515
Query: 640 FLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS 684
L L +R S++ E++ RL+ E++C+ + E ++S
Sbjct: 516 VLVYLEIRDGSLT-----EIKRTRLEYEIACMDLNTLDKEGDQTS 555
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 39/203 (19%)
Query: 49 GHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQ 108
G+ +PT +++ K T +E++ I E+G+ + + E ++G I + KKF N
Sbjct: 21 GNFTTPTDRNLIVAKNTRLEILTITEEGL-KPIKEVNIYGRISVM------KKFRYPNE- 72
Query: 109 VMGKDLLVVISDSGKLSFLAFCNEMHRFFPV-AQVH--LSNPGNSRHQLGRMLAVDS-SG 164
KDLL ++D ++ L F E F V + H +S+P + G ++ VD
Sbjct: 73 --SKDLLFFLTDKYNVAILEFSAESSENFEVITRSHGCVSDPYARPSEAGNLVVVDQPKA 130
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCF 224
+IA+ Y+ L + L+ + E+ + R+ + I MCF
Sbjct: 131 RVIALRLYDGLLKMIPLNREA--------------KELRSYNIRVEE-----AQITDMCF 171
Query: 225 ISTDPRQPSKEHNPILAIILNRR 247
+S S +P+LAI+ +
Sbjct: 172 LS------SSSSDPVLAIVYEEQ 188
>gi|195500686|ref|XP_002097479.1| GE26244 [Drosophila yakuba]
gi|194183580|gb|EDW97191.1| GE26244 [Drosophila yakuba]
Length = 1140
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 26/263 (9%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMV--LKEENGRLVYTSPIQN---IAPILDMSVVDYHD 481
P C + +++ FL GD + L E Y P++N +APILD++VVD
Sbjct: 310 PEC--ITYLDNGFLYIGARHGDSQLVRLNSEAIDGSYVVPVENFTNLAPILDIAVVDLDR 367
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSD-PYHSFLV 540
+ + Q+ C G +GSLRIIR GI +++ GI G W++++ V + PY + LV
Sbjct: 368 QGQGQIITCSGSFKDGSLRIIRIGIGIQE--HACIDLPGIKGMWSLKVGVDESPYENTLV 425
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
L+FV TR+L + + T+ GF D+ T C V ++Q+ ++VRL A
Sbjct: 426 LAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQVIQVTSDSVRLVSSATKA- 484
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQ 660
+ W P S+G V+ N + ++ C +F + + S + E
Sbjct: 485 ---------LVAEWRPTG-DRSIGVVSCNTTQIVVASACDIFYIVIEDGS-----LREQS 529
Query: 661 HMRLQSELSCISIPQKHPERRKS 683
L+ E++C+ I + KS
Sbjct: 530 RRTLEYEVACLDITPLDETQTKS 552
>gi|302916981|ref|XP_003052301.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733240|gb|EEU46588.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1212
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 42/265 (15%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + P N P+LD V + E Q++ CG + R+++ G+ + +++
Sbjct: 412 ENLALVESIPAMN--PLLDCKVANLTGEDAPQIYTICGNGARSTFRMLKHGLEVNEIV-- 467
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
A GI + WT+++ S+ Y +++VLSF T VL +G +V+DS GF V TLA
Sbjct: 468 ASELPGIPSAVWTLKLNRSEQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTSVPTLA 526
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSI-SLGAVAHNMI 631
L+ + L+Q+H +R +G I W P+H SI + A AH +
Sbjct: 527 AQLLGEDGLIQVHPKGIRHV------RNGHI-------NEWAAPQHRSIVAASANAHQVA 573
Query: 632 IVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS------- 684
I +S F + S++ Y+ + + ++C+S+ R +SS
Sbjct: 574 IALSSGEIVYFEMDADG-SLAEYD----EKKEMFGTVTCLSLGDVPEGRLRSSFLAVGCD 628
Query: 685 ---------SPISLVSNSSVPALPA 700
P S + N SV AL A
Sbjct: 629 DCTVRILSLDPDSTLENKSVQALTA 653
>gi|68075683|ref|XP_679761.1| splicing factor 3b, subunit 3, 130kD [Plasmodium berghei strain
ANKA]
gi|56500578|emb|CAH95367.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium berghei]
Length = 1216
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 174/442 (39%), Gaps = 97/442 (21%)
Query: 470 PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRTAPIYQGITGTW 525
PI+DM ++D + Q++A CG P SLRI++ G+S+E+L L P Y W
Sbjct: 405 PIVDMKILDAKNSNIPQIYALCGRGPRSSLRILQHGLSIEELANNELPGKPRY-----IW 459
Query: 526 TVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
T++ S Y ++++SF T +L +G +V DS+ +V T+ L+ D +Q+
Sbjct: 460 TIKKDNSSEYDGYIIVSFEGNTLILEIGETVEEVYDSL-LLTNVTTIHINLLYDNSFIQV 518
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
+ +R H G + W P++ I+ + I++S S ++
Sbjct: 519 YDTGIR--------HING-----KIVQEWVPPKNKQINAATSNGSQIVISLSGGELIYF- 564
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
+ SH + E+ + E+ C+SI Q + ++S
Sbjct: 565 ---EIDESH-TLTEIFRKNINVEILCLSIQQIQQNKLRAS-------------------- 600
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQ--- 761
+G V +LS + + L++ I+ N+ I CI + L +
Sbjct: 601 --FLAVGCLDNVVRLLSIEKDQYFKQLST-YILPNNSSPQDI--CISEMKELGSQKEHTI 655
Query: 762 FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDEL 821
Y+ GL G+LLR + PI T N
Sbjct: 656 LYLNIGLNTGVLLR--------------SVIDPICGTLSNH------------------- 682
Query: 822 PINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHA 881
++ +G V + + + + ++ LS++ +L + Y+ +++ +A
Sbjct: 683 -------YSKYLGAKSVKICHVQVNKNPALLVLSEKTYLCYVYQGKYIYSPLNYDVLEYA 735
Query: 882 TPVCSVECPKGILFVAENSLNL 903
+ S +C G + ++ NSL +
Sbjct: 736 SSFYSEQCSDGYVAISGNSLRI 757
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPW 98
K + + + +G+ P ++++V K +EL+ + G + + + +FG I+ L +
Sbjct: 11 KPTAITRTVYGNFSGPKAHEIVVAKGQVLELLRADKQGKLNVITSKDIFGIIRSLEIF-- 68
Query: 99 NKKFNAQNSQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGR 156
++MG KD + + SDSG+L L + +E + F V G R G
Sbjct: 69 ---------RLMGSNKDYIAIGSDSGRLVILKYDDEKNDFIRVHCETYGKSGIRRIIPGE 119
Query: 157 MLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
+A+D G + + A E + ++ L+ + ++
Sbjct: 120 YIAIDPKGRALMLCAIEKQKFVYILNRDNKENL 152
>gi|255946770|ref|XP_002564152.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591169|emb|CAP97395.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1209
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/449 (20%), Positives = 171/449 (38%), Gaps = 101/449 (22%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
+ +++P++D +++ ++ Q++ CG + R ++ G+ + +++ + + Q +
Sbjct: 417 MNSLSPLIDSKILNLSEDDAPQIYTICGSGARSTFRTLKHGLEVSEIVES-DLQQVPSAV 475
Query: 525 WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
WT ++ D +H++++LSF T VL +G +V+D+ GF TLA + + LVQ
Sbjct: 476 WTTKLTRGDEFHTYIILSFANGTLVLSIGEIVEEVSDT-GFLSSAPTLAVQQLGEDSLVQ 534
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
+H +R + + +P P+H SI A + V+ S+ ++
Sbjct: 535 VHPRGIRHILADQRVN------EWPA-----PQHRSIVAAAANERQVAVALSSGEIVYF- 582
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
E+ ++ ERR+ S ++ +S V P G +
Sbjct: 583 ----------------------EMDADGTLAEYDERRQMSGTVTSLSMGEV---PEGRMR 617
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLR------VLASGSIVLTNTMGTAISGCIPQDVRLVL 758
+G +V +LS P L + ++ S + M + SG
Sbjct: 618 SSFLAVGCDDSTVRILSLNPDSTLENKSVQALTSAPSALQIMAMADSSSG---------- 667
Query: 759 ADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESK 818
Y+ GL +G+ LR
Sbjct: 668 GTTLYLHIGLYSGVYLR----------------------------------------TVL 687
Query: 819 DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL----LQTARHSLAYTSIS 874
DE+ L TR IG PV L +S ++ALS RPWL +QT S T +
Sbjct: 688 DEVTGELSDTRTRFIGAKPVKLSQVSVKGQTAVLALSTRPWLGYSDVQT--KSFMLTPLD 745
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
+ S +C +G++ + SL +
Sbjct: 746 YVGLEWGWNFSSEQCVEGMIGIQGRSLRI 774
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G + + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKITPLFSQDVFGIIRSLAA------FRVAGSS---KDYIIIGSDSGRITIVEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNSRHQLGRMLAVDSSG--CLIA 168
F + G R G+ LAVD G CLIA
Sbjct: 105 FNRIHMETFGKSGVRRVVPGQYLAVDPKGRACLIA 139
>gi|299751161|ref|XP_001830098.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
gi|298409248|gb|EAU91763.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
Length = 1205
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/447 (19%), Positives = 177/447 (39%), Gaps = 83/447 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYH-DEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTA-P 516
L+ + ++ P+LD ++ D + ++FA CG P S +I+ G+ ++++ + P
Sbjct: 401 LMLIDELSSLNPVLDAKILKPSLDSEAPKIFAACGRGPASSFKILSHGLEVDEMASSELP 460
Query: 517 IYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
+ W+ + +D Y + LV+SF T VL +G + +V DS GF + TLA
Sbjct: 461 GFLAPHSLWSTKRMQTDHYDNLLVMSFQNATIVLSIGESMEEVKDS-GFLTSMPTLAVQQ 519
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ + L+Q+H + +R + + V W V IV+ +
Sbjct: 520 IGENGLIQVHTHGIRHLVDSQV-------------NEW----------KVPQGQTIVAAN 556
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
++ + S + ++E+ + + ++ + S V +
Sbjct: 557 TNRRQVVVALSSAEIVYFELDQEGQLNEYQDMKAMG---------------STVLALGLG 601
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRL 756
+P G + +G +V V+S P L ++ ++ + I+ + +
Sbjct: 602 EVPEGRLRFPYLAVGCEDQTVRVMSLDPDSTLETISLQALTAPPS-SICIAYMLDASINK 660
Query: 757 VLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFE 816
V F V GL NG+LLR + + T + R
Sbjct: 661 VQRSMF-VNIGLANGVLLR-----------------TVLDGTNGQLTDTR---------- 692
Query: 817 SKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQ 876
TR +G PV L+ + + ++A+S R WL + + + +T ++ +
Sbjct: 693 -------------TRFLGTKPVRLLRVKLKGEDAILAISSRVWLNYSHQQKMEFTPLACE 739
Query: 877 PSTHATPVCSVECPKGILFVAENSLNL 903
A+ CP+GI+ +A+N+L++
Sbjct: 740 TPECASSFTGESCPEGIISIAKNTLSI 766
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 30 IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFG 88
+H + S ++Q A G+ +++ T +EL+ + D G + +V VFG
Sbjct: 1 MHLYNYTLQPSSAIVQAAVGNFSGLRQQEILVSNGTRLELLQVDNDSGKLSTVAGADVFG 60
Query: 89 TIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
+I+ LA KD +V SDSG++ L + + + F + Q G
Sbjct: 61 SIRSLAAFRLTGG---------SKDYAIVGSDSGRIVILEYDPKTNVFNKLHQETYGKSG 111
Query: 149 NSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
R G+ LA D G + ++A E+ ++ L+ +++
Sbjct: 112 TRRIVPGQYLATDPRGRSVMIAAMENSKLVYVLNRDVATNL 152
>gi|358378986|gb|EHK16667.1| hypothetical protein TRIVIDRAFT_40938 [Trichoderma virens Gv29-8]
Length = 1212
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 38/260 (14%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I ++ P+LD V + +E Q++ CG + R ++ G+ + +++ +
Sbjct: 414 LVLVESIPSMNPLLDCKVANLTNEDAPQIYTICGNGARSTFRTLKHGLEINEIVSSE--L 471
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
GI + WT+++ ++ Y +++VLSF T VL +G +V+DS GF V TLA L+
Sbjct: 472 PGIPSAVWTLKLNRTEQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTSVPTLAAQLL 530
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTS 636
D L+Q+H +R V W P+H SI + + + ++ S
Sbjct: 531 GDDGLIQVHPKGIRHIRNGQV-------------NQWDAPQHRSIVAASTNAHQVAIALS 577
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS------------ 684
+ ++ S++ Y+ + + ++C+S+ + R +SS
Sbjct: 578 SGEIVYFEMDDDGSLAEYD----EKKEMFGTVTCLSLGEVPEGRLRSSFLAVGCDDCTVR 633
Query: 685 ----SPISLVSNSSVPALPA 700
P S + N SV AL A
Sbjct: 634 ILSLDPESTLENKSVQALTA 653
>gi|322707263|gb|EFY98842.1| Pre-mRNA-splicing factor rse-1 [Metarhizium anisopliae ARSEF 23]
Length = 1212
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 27/234 (11%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + P N P+LD V + E Q++ CG + R++R G+ + +++
Sbjct: 412 ENLALVESIPSMN--PLLDCQVANLTGEDAPQIYTVCGNGARSTFRMLRHGLEVNEIV-- 467
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
A GI + WT+++ + Y +++VLSF T VL +G +V+DS GF V TLA
Sbjct: 468 ASELPGIPSAVWTLKLNRGEQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFSTSVPTLA 526
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAV-AHNMI 631
L+ D L+Q+H +R V W P+H SI + AH +
Sbjct: 527 AQLLGDDGLIQVHPKGIRHIRNGKV-------------NEWDAPQHRSIVAASTNAHQVA 573
Query: 632 IVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
I +S F + S++ Y+ + + ++C+S+ + PE R SS
Sbjct: 574 IALSSGEIVYFEMDSDG-SLAEYD----EKKEMFGTVTCLSLGEV-PEGRVRSS 621
>gi|330935579|ref|XP_003305038.1| hypothetical protein PTT_17772 [Pyrenophora teres f. teres 0-1]
gi|311318228|gb|EFQ86975.1| hypothetical protein PTT_17772 [Pyrenophora teres f. teres 0-1]
Length = 1115
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 393 KMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFLSAFVEMGDGM 450
+ V D G +M + + G KV + G +A L++++ ++ GD
Sbjct: 281 RFVLADDYGRLYMFMLVLSAQG-KVQSWKLDIIGQTSRASTLVYLDAGYVYVGSHQGDSQ 339
Query: 451 VLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFACCGVAPEGSL 499
V+K + NIAPILD +++D + + ++ G +GSL
Sbjct: 340 VIKIAEKSMEIVQTFSNIAPILDFTIMDMGNRSAEGQTNEYSSGQARIVTASGAYQDGSL 399
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG--LNFT 557
R +RSG+ LE L + + + I+ ++++ S Y L++SFV E+R+ R
Sbjct: 400 RSVRSGVGLEDLGVLSEM-EHISDLFSLKSTASAQYADTLLVSFVNESRIFRFDPQGEVE 458
Query: 558 DVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLC-MPTMVAHSGGIPLSYPVCT--SW 614
+V + D TLA ++ G +VQ+ R+C + + S +P+ P T S
Sbjct: 459 EVDEFASLALDETTLAAANISQGRIVQVTNGRARICDLDGGMIISEWLPMGGPTITAASI 518
Query: 615 FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIP 674
HV +SLG V +VS S L ++ ++ + +S+++CI++P
Sbjct: 519 NESHVLVSLGGVT----VVSISMADGLQVVKEKTFNA-------------ESQVACIALP 561
>gi|115390120|ref|XP_001212565.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
gi|114194961|gb|EAU36661.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
Length = 1217
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 173/459 (37%), Gaps = 103/459 (22%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV T I ++ P++D V + +E Q++ G + R ++ G+ + +++ +
Sbjct: 409 ENLNLVDT--INSLNPLIDSKVANLSEEDAPQIYTISGAGARSTFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ D + ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTREDEFDAYIILSFANGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + LVQIH +R M + +P P+H SI A + V+
Sbjct: 525 QQLGEDSLVQIHPRGIRHIMVDRRVN------EWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
S+ ++ E+ ++ ERR+ S ++ +S
Sbjct: 574 LSSGEIVYF-----------------------EMDADGTLAEYDERRQMSGTVTSLSLGE 610
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLR------VLASGSIVLTNTMGTAISG 748
V P G I +G +V +LS P L + A+ S + +M + SG
Sbjct: 611 V---PEGRIRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMADSSSG 667
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
Y+ GL +G+ LR
Sbjct: 668 ----------GTTLYLHIGLYSGVYLR--------------------------------- 684
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL----LQTA 864
DE+ L TR +G PV L +S ++ALS RPWL +QT
Sbjct: 685 -------TVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTAVLALSSRPWLGYSDIQTK 737
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
L T + + P S +C +G++ + +L +
Sbjct: 738 GFML--TPLDYVPLEWGWNFSSEQCLEGMVGIQGQNLRI 774
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G V + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVTPIYSQDVFGIIRSLAA------FRLAGSN---KDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
F ++HL G S R G+ LAVD G +++ E ++ L+ +S +++
Sbjct: 105 F---NRIHLETFGKSGVRRVIPGQYLAVDPKGRACIIASVEKNKLVYVLNRNSQAEL 158
>gi|412993390|emb|CCO16923.1| predicted protein [Bathycoccus prasinos]
Length = 1273
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 101/465 (21%), Positives = 172/465 (36%), Gaps = 112/465 (24%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L I++++P + ++ E+ ++ A CG P + R++R G+ L ++ R+ P+
Sbjct: 413 LALIDEIESLSPTIALASNISRKEETPRLLALCGQGPRSTFRVLRQGVPLSEMARS-PLP 471
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
G +T+R SD +++V+SF T VL +G +VTD+ G TLA +
Sbjct: 472 GNPNGVFTIRKSKSDTTDAYIVVSFTNATLVLSIGDTVEEVTDT-GILATSSTLAVSALG 530
Query: 579 ---DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVS 634
DG L+QIH + VR + ++ G+ W P I+ A IV+
Sbjct: 531 DDDDGSLIQIHPSGVR----HVRGNNKGV-------NEWRAPGRKKITACACNRGQAIVA 579
Query: 635 -TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNS 693
T F L ++ E++ + SE+ + IP PI
Sbjct: 580 LTGGELVYFELD------EAGQLLEIEKIETSSEVVSVDIP-----------PI------ 616
Query: 694 SVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQD 753
P G + + + +V VLS P E LR T+G + P+
Sbjct: 617 -----PDGSLRAKFAAVAGYDSTVRVLSLNPGEALR-----------TVGVQATPSPPES 660
Query: 754 VRLVLADQ---------------FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISAT 798
V L+ + ++ GL NG+L+R E
Sbjct: 661 VLLLEVNNKTTKNKKAGSSAPPSMFLNVGLSNGILVRCEV-------------------- 700
Query: 799 FRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRP 858
D + L +R +G P L + + ++ +ALS RP
Sbjct: 701 --------------------DRVSGALSDARSRFVGQRPPKLNRIEMNEESGFVALSTRP 740
Query: 859 WLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
WL + + A S + P+GI+ V + SL +
Sbjct: 741 WLGFNENGRFSIVPACHETIDRACGFASEQVPEGIVAVVDGSLRI 785
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNS 107
+G+ +P +++ K T+IEL+ + G ++S+ + FG I+ +A + N
Sbjct: 19 NGNFSAPKVQEIIASKGTAIELLRPDQHGKLKSIAFRECFGIIRSMAAF----RLAGAN- 73
Query: 108 QVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLI 167
KD +V+ SDSG++ L F E ++F V + G R G+ VD G +
Sbjct: 74 ----KDHVVIGSDSGRIVVLRFDAEKNQFEQVHKETFGKSGVRRVVPGQFCCVDPKGRAV 129
Query: 168 AVSAYEDRLGLFSLSMSSGSDI 189
++A E + ++ L+ S +++
Sbjct: 130 MLAALEKQKVVYVLNRDSQANL 151
>gi|330790247|ref|XP_003283209.1| CPSF domain-containing protein [Dictyostelium purpureum]
gi|325086890|gb|EGC40273.1| CPSF domain-containing protein [Dictyostelium purpureum]
Length = 1233
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 187/475 (39%), Gaps = 99/475 (20%)
Query: 444 VEMGDGMVL---KEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLR 500
+E DG + +EE LV TS + +++PI+D V+D E+ Q+++ CG + + SL+
Sbjct: 377 MEEKDGFIWFKQREELKNLVQTSTLSSLSPIVDFKVLDIVREENPQLYSLCGTSKDSSLK 436
Query: 501 IIRSGISLEKLLRTAPIYQGI-TGTWTVRMKVS----DPYHSFLVLSFVEETRVLRVGLN 555
++R G+S+ + T G+ +G WTV S D ++V+SFV T VL VG
Sbjct: 437 VLRHGLSVSTI--TNAKLPGVPSGIWTVPKSNSPSAQDQTDKYIVVSFVGSTSVLSVGET 494
Query: 556 FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW- 614
+ +S G TL G + + ++Q+ R M + W
Sbjct: 495 IQENHES-GILESTTTLLIGSMGEDSILQVFPTGFRFIRSDMRTN------------EWR 541
Query: 615 FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCIS-- 672
P +I N ++++ S ++ +S ++ E+ + +++CI
Sbjct: 542 APGRKTIVRATCNQNQLVIALSGGEVIYFELDQSGGLT-----EIIKKDFRRDIACIEIS 596
Query: 673 -IPQKHPERR-----KSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKE 726
IP+ R P+ L+S L +G ++ T + +E LS V +
Sbjct: 597 PIPKGRSMARFLAISDWEGPVRLLS------LDRDNCLGQISMLDTDKVYIESLSIVEMQ 650
Query: 727 GLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPS 786
V + MG ++ ++ GL+NG++ R
Sbjct: 651 VNEAGVDNFKVSSQNMGGSL----------------FLFVGLKNGVIKR----------- 683
Query: 787 SVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDS 846
AT N SG L I TR +G PV L +
Sbjct: 684 ----------ATLDNY----SG---------------ELSDIRTRLLGRRPVKLFKIKVR 714
Query: 847 LDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSL 901
++ALS R WL + L +S +P +A+ + S + P+ I+ +E+ +
Sbjct: 715 GGNGILALSSRVWLNYANQGKLEIVPLSVEPLENASNLSSDQSPESIVATSEDHI 769
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 32 YLAKCVLKG-SVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
YL L+ + V Q G+ ++V S+E++ EDG + SV VFG I
Sbjct: 2 YLYNLTLQRPTAVYQSICGNFSGTKQIEIVLNHGRSLEMIRYDEDGKMSSVLYSEVFGVI 61
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
+ +++P+ + KD +VV SDSG++ L + + ++F V Q G
Sbjct: 62 R--SIIPFRLTSGS-------KDYIVVGSDSGRVVILEYNSTKNQFDKVHQETFGRSGCR 112
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIA 210
R G+ LAVD G + A E + ++ L+ S + + I P E A
Sbjct: 113 RIVPGQYLAVDPKGRAFMIGAIEKQKLVYILNRDSSAKLT---ISSPLE----------A 159
Query: 211 QKNSISGTIWSMCFISTDPRQPSKEHNPILAII 243
K+S I+SMC + NPI A I
Sbjct: 160 HKSST--IIFSMCGVDVGF------ENPIFATI 184
>gi|340959394|gb|EGS20575.1| putative pre-mRNA splicing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1213
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 173/453 (38%), Gaps = 99/453 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I ++ P++ V + E Q++A CG S R+++ G+ + +++ + +
Sbjct: 415 LVLVESIDSMNPLVGCKVANLTGEDAPQIYAICGNGARSSFRMLKHGLEVSEIV-ASELP 473
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WT ++ D Y +++VLSF T VL +G +V+DS GF V TLA +
Sbjct: 474 GTPSAVWTTKLTKYDEYDAYIVLSFTNATLVLSIGETVEEVSDS-GFLTTVPTLAVQQMG 532
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ L+QIH +R + V +P P+H SI N ++++ S+
Sbjct: 533 EEGLIQIHPKGIRHIVQGRVNE-------WPA-----PQHRSIVAATTNENQVVIALSSG 580
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ S++ Y+ E+++ S ++ +S V
Sbjct: 581 EIVYFEMDADGSLAEYD-----------------------EKKQMSGTVTSLSLGKV--- 614
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLR------VLASGSIVLTNTMGTAISGCIPQ 752
P G+ +G +V +LS P+ L + A+ S +L +M + G
Sbjct: 615 PEGLRRSSFLAVGCDDCTVRILSLDPESTLEMKSIQALTAAPSSLLIMSMEDSTGGTT-- 672
Query: 753 DVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAAT 812
Y+ GL +G+ LR
Sbjct: 673 ---------LYLHIGLHSGVYLR------------------------------------- 686
Query: 813 SSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTA--RHSLAY 870
DE+ L + +G P L ++ ++ALS RPWL TA +
Sbjct: 687 ---TVLDEITGELTDTRQKFLGPKPTKLFQVTVQNQTCVLALSSRPWLGYTAPITRNFVM 743
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T +S+ + S +C +G++ + N L +
Sbjct: 744 TPLSYTELGYTWSFNSEQCQEGMVGIHANYLRI 776
>gi|189205943|ref|XP_001939306.1| DNA damage-binding protein 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975399|gb|EDU42025.1| DNA damage-binding protein 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1115
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 130/300 (43%), Gaps = 37/300 (12%)
Query: 393 KMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFLSAFVEMGDGM 450
+ V D G +M + + G KV + G +A L++++ ++ GD
Sbjct: 281 RFVLADDYGRLYMFMLVLSAQG-KVQSWKLDIIGQTSRASTLVYLDAGYVYVGSHQGDSQ 339
Query: 451 VLKEENGRLVYTSPIQNIAPILDMSVVDY-----------HDEKRDQMFACCGVAPEGSL 499
V+K + NIAPILD +++D + + ++ G +GSL
Sbjct: 340 VIKIAEKSMEIVQTFSNIAPILDFTIMDMGNRSGEGQTNEYSSGQARIVTASGAYQDGSL 399
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG--LNFT 557
R +RSG+ LE L + + I+ ++++ S Y L++SFV E+R+ R
Sbjct: 400 RSVRSGVGLEDLGVLGEM-EHISDLFSLKSTASAQYADTLLVSFVNESRIFRFDPQGEVE 458
Query: 558 DVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLC-MPTMVAHSGGIPLSYPVCT--SW 614
+V + D TLA ++ G ++Q+ R+C + + S +P+ P T S
Sbjct: 459 EVDEFASLALDETTLAAANISQGRIIQVTNGRARICDLDGGMITSEWLPMGGPTITAASI 518
Query: 615 FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIP 674
HV +SLG V +VS S L ++ ++ +S+++CI++P
Sbjct: 519 NESHVLVSLGGVT----VVSISMANGLQVVKEKTFGA-------------ESQVACIALP 561
>gi|195571247|ref|XP_002103615.1| GD18880 [Drosophila simulans]
gi|194199542|gb|EDX13118.1| GD18880 [Drosophila simulans]
Length = 1140
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 26/263 (9%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMV--LKEENGRLVYTSPIQN---IAPILDMSVVDYHD 481
P C + +++ FL GD + L E Y P++N +APILD++VVD
Sbjct: 310 PEC--ITYLDNGFLYIGARHGDSQLVRLNSEAIDGSYVVPVENFTNLAPILDIAVVDLDR 367
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSD-PYHSFLV 540
+ + Q+ C G +GSLRIIR GI +++ GI G W++++ V + PY + LV
Sbjct: 368 QGQGQIITCSGSFKDGSLRIIRIGIGIQE--HACIDLPGIKGMWSLKVGVDESPYENTLV 425
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
L+FV TR+L + + T+ GF D+ T C V L+Q+ ++VRL A
Sbjct: 426 LAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSVRLVSSATKA- 484
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQ 660
+ W P S+G V+ N + ++ C +F + + + E
Sbjct: 485 ---------LVAEWRPTG-DRSIGVVSCNTTQILVASACDIFY-----IVIEDGNLREQC 529
Query: 661 HMRLQSELSCISIPQKHPERRKS 683
L E++C+ I ++KS
Sbjct: 530 RRTLAYEVACLDITPLDETQKKS 552
>gi|71004436|ref|XP_756884.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
gi|74704394|sp|Q4PGM6.1|RSE1_USTMA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|46095609|gb|EAK80842.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
Length = 1221
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 178/449 (39%), Gaps = 84/449 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + ++ PILD ++ Q+FA CG S +++R G+ +++ + +
Sbjct: 412 LVQVDEMPSLDPILDAKPLNPLAADSPQIFAACGRGARSSFKMLRHGLEVQEAVSSD--L 469
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WT ++ D Y S+++LSFV T VL +G +V+DS GF TLA +
Sbjct: 470 PGVPSAVWTTKITQQDEYDSYIILSFVNGTLVLSIGETIEEVSDS-GFLTSSSTLAVQQL 528
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSN 637
L+Q+H + +R + + E + SL I+ + +N
Sbjct: 529 GQDALLQVHPHGIR----------------HVLVDKQINEWATPSLPNGRQTTIVATCTN 572
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
+ + +LS + +E+ + +L+ ++ ER+ + + + S+P
Sbjct: 573 ERQVVV----ALSSNELVYFELD---MDGQLN------EYQERKAMGAGVLTM---SMPD 616
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLV 757
P G +G +V ++S P L SI + A S C+ + +
Sbjct: 617 CPEGRQRTPYLAVGCDDSTVRIISLEPNSTL-----ASISIQALTAPASSICMAEMLDAT 671
Query: 758 LADQF---YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSS 814
+ +V GL+NG+LLR I ++ +T
Sbjct: 672 IDRNHATTFVNIGLQNGVLLR--------------TILDAVTGQLTDTR----------- 706
Query: 815 FESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSIS 874
TR +G V L+ A ++ALS R WL T + L + +
Sbjct: 707 ---------------TRFLGSKAVRLIRTKVHGQAAVMALSTRTWLSYTYQDRLQFVPLI 751
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
F HA + CP+G++ + ++L +
Sbjct: 752 FDVLDHAWSFSAELCPEGLIGIVGSTLRI 780
>gi|298711490|emb|CBJ26578.1| n/a [Ectocarpus siliculosus]
Length = 1135
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 191/485 (39%), Gaps = 114/485 (23%)
Query: 447 GDGMVLK---EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLR 500
GD ++K E++ + Y ++ N+ PILDM V D + + Q C G + +GSLR
Sbjct: 322 GDSQLIKLNPEKDAQGTYIQVLETYDNLGPILDMCVADLDRQGQGQAVTCSGCSKDGSLR 381
Query: 501 IIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVT 560
IIR+GI + + A GI G W++R ++ + +LV +F+ ETRVL F +
Sbjct: 382 IIRNGIGINE--HAAIELAGIKGMWSLRPSNTN-HDKYLVQAFISETRVLA----FEEDE 434
Query: 561 DS---------VGFRPDVCTLACGLVADGLLVQIHQNAVRL-CMPTMVAHSGGIPLSYPV 610
D GF+ + CTL CG V + VQ+ + V L C +
Sbjct: 435 DGDHQLAEGEIAGFQ-EGCTLFCGCVGGNMAVQVTKRGVVLICCDGL-----------QE 482
Query: 611 CTSWFPE---HVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSE 667
W P +++++ G ++ + N L + + ++ + ++L +E
Sbjct: 483 IDRWDPPTDLNITVASGNATRVVLALGGGNLVHL------EVDATAKKLVQKARVQLDNE 536
Query: 668 LSCISI--PQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPK 725
++CIS+ P P + ++ + L + V +G + +V +LS
Sbjct: 537 IACISLNPPSNQPVSNAEPATTAMECDEE-SKLDSLVAVGMWTDM-----TVRLLSLPDL 590
Query: 726 EGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRF--EWPPDSN 783
+G+ G +T ++ + +AD Y+ GL +G ++ F E +S
Sbjct: 591 QGVSSQPLGG----DTQARSV-------ILATIADVHYLFVGLGDGHVVSFPLEVTAEST 639
Query: 784 I----PSSVAPIHSPIS-ATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPV 838
+ P VA P+ A FRN G+ V
Sbjct: 640 LALGTPKKVALGTQPVGLACFRNN-------------------------------GMVCV 668
Query: 839 FLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAE 898
F+ SDRP ++ + L Y +++ S E P + +E
Sbjct: 669 FVA-------------SDRPAVIYCSGGKLLYANVNMGEVNSVCSFDSSELPHCLALASE 715
Query: 899 NSLNL 903
NSL +
Sbjct: 716 NSLTI 720
>gi|443896643|dbj|GAC73987.1| predicted DNA methylase [Pseudozyma antarctica T-34]
Length = 1285
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 181/450 (40%), Gaps = 86/450 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ + ++ PILD + ++ Q+FA CG S +++R G LE L +
Sbjct: 476 LMQVDEVPSLDPILDATPLNPLASDSPQIFAACGRGARSSFKMLRHG--LEALEAVSSDL 533
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WT ++ D Y S++VLSFV T +L +G +V+DS G TLA +
Sbjct: 534 PGVPSAVWTTKITRRDEYDSYIVLSFVNGTLLLSIGETIEEVSDS-GLLTSSSTLAVQQL 592
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSN 637
+ L+Q+H + +R + + E V+ SL I+ + +N
Sbjct: 593 GEDALLQVHPHGIR----------------HILVDKQINEWVTPSLPNGRQTTIVATCTN 636
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
+ + +LS + +E+ + +L+ ++ ER+ +P+ + S+P
Sbjct: 637 ERQVVV----ALSSNELVYFELD---MDGQLN------EYQERKAMGAPVLTM---SMPE 680
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLV 757
P G +G +V ++S P L SI + A S C+ + +
Sbjct: 681 CPEGRQRTAYLAVGCGDSTVRIVSLEPSSTL-----ASISIQALTAPASSICMAE-MHDS 734
Query: 758 LADQF----YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATS 813
D+ +V GL+NG+LLR + V + F ++ +R
Sbjct: 735 TVDRHHATTFVNIGLQNGVLLR-------TVLDGVTGQLTDTRTRFLGSKAVR------- 780
Query: 814 SFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSI 873
L+ TR G T V +ALS R WL T + + +T +
Sbjct: 781 -------------LVRTRVHGQTAV-------------MALSTRTWLSFTYQSRVQFTPL 814
Query: 874 SFQPSTHATPVCSVECPKGILFVAENSLNL 903
F HA + CP G++ + ++L +
Sbjct: 815 IFDALDHAWSFSAELCPDGLIGIVGSTLRI 844
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 10/129 (7%)
Query: 46 VAHGHLRSPTSNDVVFGKETSIELVIIG-EDGIVQSVCEQAVFGTIKDLAVVPWNKKFNA 104
A G ++V K + +EL+ + G V+ + FG I+ LA
Sbjct: 84 TAVGQFSGTRQQEIVVAKGSRLELLRPDTQTGKVEIIVSSDAFGVIRSLAAFRLTGG--- 140
Query: 105 QNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
KD L+V SDSG++ L + + F V Q G+ R G+ LA D G
Sbjct: 141 ------SKDYLIVGSDSGRIVILEYQPSSNSFDKVHQETFGRSGSRRIVPGQYLATDPKG 194
Query: 165 CLIAVSAYE 173
+ A E
Sbjct: 195 RATMIGAME 203
>gi|429859776|gb|ELA34542.1| pre-mRNA-splicing factor rse1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1212
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 114/246 (46%), Gaps = 32/246 (13%)
Query: 461 YTSPIQNIA---------PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL 511
Y P++N+A P+LD V + E Q++ CG + R+++ G+ + ++
Sbjct: 407 YPRPLENLALVESIDSMNPLLDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEI 466
Query: 512 LRTAPIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVC 570
+ A GI + WT+++ D Y +++VLSF T VL +G +V+DS GF V
Sbjct: 467 V--ASELPGIPSAVWTLKLSRGDQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTSVP 523
Query: 571 TLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHN 629
TLA L+ + L+Q+H +R + + W P+H SI +
Sbjct: 524 TLAAQLLGEDGLIQVHPKGIR-------------HIRHGQINEWAAPQHRSIVAATTNEH 570
Query: 630 MIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISL 689
+ V+ S+ ++ S++ Y+ + + ++C+S+ + PE R SS +++
Sbjct: 571 QVAVALSSGEIVYFEMDGDGSLAEYD----EKKEMFGTVTCLSLGEV-PEGRLRSSFLAV 625
Query: 690 VSNSSV 695
+ S
Sbjct: 626 GCDDST 631
>gi|358391805|gb|EHK41209.1| hypothetical protein TRIATDRAFT_135379 [Trichoderma atroviride IMI
206040]
Length = 1212
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 38/260 (14%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I ++ P+LD + + E Q++ CG + R ++ G+ + +++ +
Sbjct: 414 LVLVESIPSMNPLLDCKIANLTGEDAPQIYTVCGNGARSTFRTLKHGLEINEIVSSE--L 471
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
GI + WT+++ S+ Y +++VLSF T VL +G +V+DS GF V TLA L+
Sbjct: 472 PGIPSAVWTLKLNRSEQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTSVPTLAAQLL 530
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTS 636
D L+Q+H +R V W P+H SI + + + ++ S
Sbjct: 531 GDDGLIQVHPKGIRHIRNGQV-------------NQWDAPQHRSIVAASTNAHQVAIALS 577
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS------------ 684
+ ++ S++ Y+ + ++C+S+ + R +SS
Sbjct: 578 SGEIVYFEMDDDGSLAEYD----DKKEMFGTVTCLSLGEVPEGRLRSSFLAVGCDDCTVR 633
Query: 685 ----SPISLVSNSSVPALPA 700
P S + N SV AL A
Sbjct: 634 ILSLDPESTLENKSVQALTA 653
>gi|310793065|gb|EFQ28526.1| CPSF A subunit region [Glomerella graminicola M1.001]
Length = 1212
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L I ++ P+LD V + E Q++ CG + R+++ G+ + +++ A
Sbjct: 414 LALVESIDSMNPLLDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIV--ASEL 471
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
GI + WT+++ D Y +++VLSF T VL +G +V+DS GF V TLA L+
Sbjct: 472 PGIPSAVWTLKLNRGDQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTSVPTLAAQLL 530
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H +R V W P+H SI + + V+ S
Sbjct: 531 GEDGLIQVHPKGIRHIRQGQV-------------NEWAAPQHRSIVAATTNEHQVAVALS 577
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
+ ++ S++ Y+ + + ++C+S+ + PE R SS
Sbjct: 578 SGEIVYFEMDGDGSLAEYD----EKKEMFGTVTCLSLGEV-PEGRLRSS 621
>gi|348667612|gb|EGZ07437.1| hypothetical protein PHYSODRAFT_565381 [Phytophthora sojae]
Length = 1197
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L S + +++P+ + V D +E+ QM+A CG + SLR++R G+ + ++ +A
Sbjct: 388 LQLASSMPSLSPVTQLLVDDLANEQTPQMYALCGNSNRSSLRVLRHGLPITEMAASA--L 445
Query: 519 QGIT-GTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ W ++ +DPY ++V+SF + T VL VG +VT S GF D +L L+
Sbjct: 446 PGVAKAVWCLKESYADPYDKYIVVSFEDATLVLEVGETVEEVTQS-GFLRDHGSLLVALL 504
Query: 578 ADGLLVQIHQNAVR 591
D +QIH N +R
Sbjct: 505 EDDSKLQIHANGIR 518
>gi|195329354|ref|XP_002031376.1| GM24084 [Drosophila sechellia]
gi|194120319|gb|EDW42362.1| GM24084 [Drosophila sechellia]
Length = 1140
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 26/263 (9%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMV--LKEENGRLVYTSPIQN---IAPILDMSVVDYHD 481
P C + +++ FL GD + L E Y P++N +APILD++VVD
Sbjct: 310 PEC--ITYLDNGFLYIGARHGDSQLVRLNSEAIDGSYVVPVENFTNLAPILDIAVVDLDR 367
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSD-PYHSFLV 540
+ + Q+ C G +GSLRIIR GI +++ GI G W++++ V + Y + LV
Sbjct: 368 QGQGQIITCSGSFKDGSLRIIRIGIGIQE--HACIDLPGIKGMWSLKVGVDESSYENTLV 425
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
L+FV TR+L + + T+ GF D+ T C V L+Q+ ++VRL A
Sbjct: 426 LAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSVRLVSSATKA- 484
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQ 660
+ W P S+G V+ N + ++ C +F + + S + E
Sbjct: 485 ---------LVAEWRPTG-DRSIGVVSCNTTQILVASACDIFYIVIEDGS-----LREQS 529
Query: 661 HMRLQSELSCISIPQKHPERRKS 683
L E++C+ I ++KS
Sbjct: 530 RRTLAYEVACLDITPLDETQKKS 552
>gi|388582014|gb|EIM22320.1| hypothetical protein WALSEDRAFT_60013 [Wallemia sebi CBS 633.66]
Length = 1208
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 178/450 (39%), Gaps = 91/450 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV IQ++APILD V + Q++ GV SLR++R G+ + + + ++ +
Sbjct: 412 LVPVDEIQSLAPILDAKVQSIYAGDTPQIYTASGVGSRSSLRVMRHGLDVIEAV-SSELP 470
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
G WT++ D Y S +VLSFV T VL +G + +V+D+ G V TL+ +
Sbjct: 471 APPNGIWTLKQNAQDMYDSLIVLSFVNGTLVLGIGESIEEVSDT-GLATSVSTLSVDQLG 529
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
+ ++Q+ +R L+ W P I+ + V+ SN
Sbjct: 530 EDSMIQVFPQGIRHI------------LNDKRVNEWKSPSDTYITASTTNSRQVCVALSN 577
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPA 697
++ +EM + +E + RKS S V+ S+
Sbjct: 578 GELVY--------------FEMDNEGQLNEF----------QERKSME--STVTTMSIGE 611
Query: 698 LPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLV 757
+P G +G ++ ++S P+ L V++ ++ + S C+ + +
Sbjct: 612 VPQGRQRCPYLALGCDDQTIRIVSLDPENTLEVVSVQAVTAQPS-----SICVAEILDKS 666
Query: 758 LADQF----YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATS 813
L D++ +V GL NG+LLR + ++ + +T
Sbjct: 667 L-DKYNPTLFVNIGLANGVLLR--------------TVLDTVNGSLADTR---------- 701
Query: 814 SFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSI 873
TR +G PV L ++ ++ALS R +L + +T +
Sbjct: 702 ----------------TRFLGAKPVVLRRVTVDKQQAVMALSTRTFLNYAHGDQMYFTPL 745
Query: 874 SFQPSTHATPVCSVECPKGILFVAENSLNL 903
++P + + CP G++ +++ L +
Sbjct: 746 LYEPLDQVSSFNAELCPDGLIGISDTVLRI 775
>gi|320587625|gb|EFX00100.1| nuclear mRNA splicing factor protein [Grosmannia clavigera kw1407]
Length = 1220
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 21/232 (9%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L I+++ P+LD V + D+ Q+++ CG + R+++ + + +++ + +
Sbjct: 415 LALVESIESMNPMLDCKVANLTDDDVPQIYSVCGNGARSTFRMLKHALEVNEIV-ASQLP 473
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
T WT +++ + Y +F+VLSF T VL +G +VTD+ GF V TLA +
Sbjct: 474 GTPTAVWTTKVRRDEEYDAFIVLSFNNGTLVLSIGETVEEVTDT-GFLSSVPTLAVQQLG 532
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSN 637
D L+Q+H +R V W P+H SI A ++V+ S+
Sbjct: 533 DDGLIQVHPKGIRHIRDGRV-------------NEWAAPQHRSIVAAATNERQVVVALSS 579
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISL 689
++ S++ Y+ + + ++C+S+ PE R SS +++
Sbjct: 580 GEIVYFEMDTDGSLAEYD----EKKEMFGTVTCLSLGAV-PEGRLRSSYLAV 626
>gi|301110252|ref|XP_002904206.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
gi|262096332|gb|EEY54384.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
Length = 1197
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 175/444 (39%), Gaps = 98/444 (22%)
Query: 470 PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGIT-GTWTVR 528
P+ + V D +E+ QM+A CG SLR++R G+ + ++ +A G+ W ++
Sbjct: 399 PVTQLLVDDLANEQTPQMYALCGNNNRSSLRVLRHGLPITEMAASA--LPGVAKAVWCLK 456
Query: 529 MKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQN 588
+DPY ++V+SF + T VL VG +V S GF D +L L+ D +QIH N
Sbjct: 457 ESYADPYDKYIVVSFEDATLVLEVGETVEEVAQS-GFLRDHGSLLVALLEDDSKLQIHTN 515
Query: 589 AVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS-TSNPCFLFILGVR 647
+R +P PV P I A +++S F LG
Sbjct: 516 GIR-----------HVPKFQPVTEWKAPGKKVIEHCAANSRQVVISLAGGEIIYFELGQS 564
Query: 648 SLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYT 707
E+ E + L E+ + + + PE R+ +
Sbjct: 565 G------ELAEKGKLDLGFEVCSLDLGEV-PEGRQR----------------------FQ 595
Query: 708 FV-IGTHRPSVEVLSFVPKEGLRVLASGSIVLT---NTMGTAISGCIPQDVRLVLADQFY 763
F+ +G+ +V +LS P E R ++ LT +T+ A P + Q
Sbjct: 596 FMAVGSWDNTVRILSLDPNELFR--QKSTLALTSHPHTLCLAQLQNEPSTPDSEHSSQAL 653
Query: 764 VLA-GLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELP 822
L+ GL NG+L + + PI+AT ++
Sbjct: 654 FLSIGLDNGVLQQ--------------SLIDPITATLADSR------------------- 680
Query: 823 INLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL---LQTARHSLAYTSISFQPST 879
+R +G PV L ++ ++ALS R W+ QT RH T +S + +
Sbjct: 681 -------SRFLGTNPVKLFRVAVEGKRSILALSSRAWISYFHQTRRH---LTPLSCELLS 730
Query: 880 HATPVCSVECPKGILFVAENSLNL 903
+A+ S +CP GI+ + + +
Sbjct: 731 YASSFNSEQCPGGIVALTNEGMKI 754
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNS 107
+G+ +P + ++V + ++L+ E G ++ V VFG ++ L Q
Sbjct: 19 YGNFSAPQAQELVVARGDVLQLLRPDESGRLEVVISTQVFGVVRAL-----------QPF 67
Query: 108 QVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGC 165
++ G +D LVV SDSGK+ L RF G R G+ LA D G
Sbjct: 68 RLTGGDRDYLVVGSDSGKIVVLEVNPTSSRFEARQSETYGKTGCRRITPGQYLAADPKGR 127
Query: 166 LIAVSAYEDRLGLFSLSMSSGSDI 189
+ + A E + ++ ++ + S +
Sbjct: 128 AVLIGAVEKQQLVYVMNRDASSRL 151
>gi|255075065|ref|XP_002501207.1| predicted protein [Micromonas sp. RCC299]
gi|226516471|gb|ACO62465.1| predicted protein [Micromonas sp. RCC299]
Length = 1423
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 35/192 (18%)
Query: 430 KALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQN----IAPILDMSV-----VDYH 480
+A+L+ EG + G KE+ G YT +++ I+PI+D++ V
Sbjct: 460 EAMLYGEGEAAAKAANAGR----KEDPG---YTFTVRDSVLGISPIIDLTAGASASVQGD 512
Query: 481 DEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT-APIYQGITGTWTV--------RMKV 531
E+R ++ A CG G+L I++ GI E + A G+ GTWTV R++
Sbjct: 513 TEERAELVAACGHGKNGALAILQRGIQPELVTEVEAGTLPGLMGTWTVYHESRDNERLRE 572
Query: 532 S---------DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGL 581
S DP+HS+LV+S T VL G +V+++V D TLA G +
Sbjct: 573 SGAAAAAANVDPFHSYLVISLESTTMVLETGEELREVSEAVELVTDAATLAAGNMHGRKR 632
Query: 582 LVQIHQNAVRLC 593
+ Q+H+ VR+C
Sbjct: 633 IAQVHKGGVRIC 644
>gi|326432370|gb|EGD77940.1| splicing factor 3b subunit 3 [Salpingoeca sp. ATCC 50818]
Length = 1232
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Query: 466 QNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTW 525
+++ P++ + D H+E+ Q++A CG + S R++R G+ + ++ + + + W
Sbjct: 408 ESLHPMIACQLADLHEEETPQLYALCGRGAKSSFRVLRHGLEVSEVA-VSELPGNPSAVW 466
Query: 526 TVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
+V+ V D ++LVLSFV++T VL +G +V DS GF +V TL+ + D L+Q+
Sbjct: 467 SVKRHVDDESDTYLVLSFVDKTLVLGIGETVEEVKDS-GFLEEVPTLSASRIGDDSLLQV 525
Query: 586 HQNAVR 591
+ +R
Sbjct: 526 YPGGIR 531
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 19 SSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVI-IGEDGI 77
S+AP ++H + K + + Q HG+ +V G+ +EL+ G
Sbjct: 4 KSTAP-----DVHLYNLTLQKTARINQAVHGNFAGTKQQLIVVGRGKILELLKPDSTTGN 58
Query: 78 VQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFF 137
+ S+C ++G ++ L P+ + N KD LVV +DSG+++ L + + + F
Sbjct: 59 LTSLCVTEIYGVVRSLQ--PF--RLTGGN-----KDYLVVGTDSGRITVLEYDTDTNLFK 109
Query: 138 PVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDR 175
V Q G R G+ LA D G + + A+E +
Sbjct: 110 KVHQETFGKSGCRRIVPGQYLAADPKGRAVMIGAFEKQ 147
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 774 LRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA-ATSSFESKDELPINLQLIATRR 832
LR + P + PSS+ I A T + G+A S + D++ +L TR
Sbjct: 634 LRMQALPGA--PSSLCIIEIAGQAGEPGTLQLHIGLANGVVSRSTMDKVTGDLSDSRTRY 691
Query: 833 IGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKG 892
+G+ V L P+ ++ALS RPW+ T + +S++ +A CS + P+G
Sbjct: 692 LGVREVRLFPVRAHGHPAVLALSTRPWIAFTYQGQPRMAPLSYEALEYAHMFCSEQLPEG 751
Query: 893 ILFVAENSLNL 903
I+ VA+N+L +
Sbjct: 752 IVAVAKNTLRI 762
>gi|380490733|emb|CCF35810.1| pre-mRNA-splicing factor rse-1 [Colletotrichum higginsianum]
Length = 1212
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 111/239 (46%), Gaps = 23/239 (9%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L I ++ P+LD V + E Q++ CG + R+++ G+ + +++ A
Sbjct: 414 LALVESIDSMNPLLDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIV--ASEL 471
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
GI + WT+++ D Y +++VLSF T VL +G +V+DS GF V TLA L+
Sbjct: 472 PGIPSAVWTLKLNRGDQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTSVPTLAAQLL 530
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H +R + + W P+H SI + + V+ S
Sbjct: 531 GEDGLIQVHPKGIR-------------HIRHGHVNEWAAPQHRSIVAATTNEHQVAVALS 577
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
+ ++ S++ Y+ + + ++C+S+ + PE R SS +++ + S
Sbjct: 578 SGEIVYFEMDGDGSLAEYD----EKKEMFGTVTCLSLGEV-PEGRLRSSFLAVGCDDST 631
>gi|406868052|gb|EKD21089.1| pre-mRNA-splicing factor rse1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1236
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 156/407 (38%), Gaps = 87/407 (21%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++D V + +E Q+++ CG + R +R G+ + +++ +
Sbjct: 412 ENLSLVES--IDSMNPLMDCKVANLTEEDAPQIYSICGTGARSTFRTLRHGLEVSEIVES 469
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
G+ + WT ++ +D Y ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 470 E--LPGVPSAVWTTKLTRNDTYDAYIILSFTNGTLVLSIGETVEEVTDT-GFLSSAPTLA 526
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIV 633
+ D L+Q+H +R I V P+H SI A + V
Sbjct: 527 VQQLGDDGLIQVHPKGIR-----------HIRADRRVNEWAAPQHRSIVAAATNARQVAV 575
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNS 693
+ S+ ++ S++ Y+ + + ++C+S+ +
Sbjct: 576 ALSSGEIVYFEMDSDGSLAEYD----EKKEMSGTVTCLSLGE------------------ 613
Query: 694 SVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQD 753
+P G + +G +V +LS P L + S+ + +A+S D
Sbjct: 614 ----VPEGRVRSQFLAVGCDDSTVRILSLDPDS---TLENKSVQALTSAPSALSIMAMSD 666
Query: 754 VRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATS 813
Y+ GL +G+ LR
Sbjct: 667 SS-SGGSTLYLHIGLYSGVYLR-------------------------------------- 687
Query: 814 SFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL 860
DE+ L TR +G P L +S A ++ALS RPWL
Sbjct: 688 --TVLDEVTGELSDTRTRFLGPKPARLFRVSVQGQAAVLALSSRPWL 732
>gi|325189950|emb|CCA24429.1| splicing factor putative [Albugo laibachii Nc14]
Length = 1644
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L S I +I+PI + V D+ +E+ Q++A CG SLRI+R G+ + ++ +A
Sbjct: 838 LAMISNIPSISPITQLLVDDFANEQTPQLYALCGQGNRSSLRILRHGLPVMEMAASA--L 895
Query: 519 QGIT-GTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ W ++ +D ++V+SF + T VL +G ++TDS G D +L L+
Sbjct: 896 PGVAKAVWCLKESFTDTCDKYIVVSFEDATLVLEIGDTVEEITDS-GLLRDHSSLLVALL 954
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSI--SLGAVAHNMIIVST 635
D ++Q+HQN R I S PV T W I A A +++
Sbjct: 955 EDNSMLQVHQNGFR-----------HIRKSQPV-TEWKAPGKKIIERCAANARQLVVSLA 1002
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRK 682
F LGV E+ E + L E++ + + Q R++
Sbjct: 1003 GGEVIYFELGVN-------ELMEKGKLDLGFEITSLDVGQVPQGRQR 1042
>gi|330805789|ref|XP_003290860.1| hypothetical protein DICPUDRAFT_95240 [Dictyostelium purpureum]
gi|325078985|gb|EGC32608.1| hypothetical protein DICPUDRAFT_95240 [Dictyostelium purpureum]
Length = 1327
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 195/962 (20%), Positives = 369/962 (38%), Gaps = 230/962 (23%)
Query: 32 YLAKCVLKGSVVLQVAHGHLRSPTS-------NDVVFGKETSIELV-IIGEDGIVQSVCE 83
Y +K +L SV+ G+ R+ + +++F KE IELV E +++S+
Sbjct: 34 YYSKTLLNPSVITHTVKGNFRNKYNYNKENKIQELIFIKENCIELVQYFEESQLLESINS 93
Query: 84 QAVFGTIKDLAVVPW--------------------------NKKFNAQNSQ-VMGKDLLV 116
Q F IKD+ V+ N + N Q KD LV
Sbjct: 94 QPSFSIIKDVKVLTLPTFITNNNNNNNNNNYNNNNDILTLKNNELNDNIDQNCKEKDFLV 153
Query: 117 VISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRL 176
+ SDSG LS L + N +F V + +S PG S LG + + +I VSA +++L
Sbjct: 154 ITSDSGYLSILTWSNIKKQFIFVQHLRISPPGYSFKYLGDKIQISQCNRIIGVSALKNKL 213
Query: 177 GLFSLSMSSGSD----IIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQP 232
LF ++ ++ + II KKI S + +K+ ++ CFI+
Sbjct: 214 SLFLINNNNNNKDSVLIISKKIDIKDLDGDIYSFNFSYEKDDPYFLTYNHCFINI---LT 270
Query: 233 SKEHNPILAII-LNRRGALLNELLLVGWNIREHAISVLSCFFEAGPLAHCVVEVPR---- 287
+K+ N I++ N + + E I+++ + S + + + + +P+
Sbjct: 271 TKDKNQIISKFQFNFQTNTVKE-------IKKNNNLIQSQQQSSQLINYQFINIPKINFI 323
Query: 288 -SYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGL 346
S+ F + F LL+ N ++ S NF L+E + E C DDE
Sbjct: 324 SSFNFNYYF----LLLL------NNKIIFTNS-NF--EKLKEIT-IKEDC-----DDE-- 362
Query: 347 FNVAACALLELRDYDPMCIDS---DSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEF 403
E R ID + K+ +K + ++W + + ++ + G
Sbjct: 363 ---------EFR----TIIDDEEYEEYYYKKQNKLITCYNWH-QIESTLYLLIGNEMGNL 408
Query: 404 FMIEIAFGSDGHK------VHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENG 457
+ IE F S+ K + +K P + L+ + + ++ DG + +
Sbjct: 409 YGIEFTFDSNNFKSSATNFNSFKKFKFKFNPIQNLINLNNGYFGIIGDLSDGGIYNIDFN 468
Query: 458 RLVYT--SPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPE-GSLRIIRSGISLEKL--- 511
+ I+N + I+D + + +++ CCG + GS+++I + I L
Sbjct: 469 KYEINECERIENHSGIIDFEIQ--KQKFTTKIYTCCGGSNSFGSVKVIENSIPTHILHHE 526
Query: 512 -LRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVT-----DSVGF 565
R IY W+ PY +V+ + T V +V + + D++ F
Sbjct: 527 KKRIGAIY-----VWSFS-----PY---IVIGYPSSTVVEKVSVAEEEEDDMFSLDNIYF 573
Query: 566 RPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGA 625
+ T+ C +DG VQ+ P + W SI A
Sbjct: 574 IENQATIYCYRTSDGTFVQV--------TPKTIVLYNNKYSKRKESYRWDVGENSIITNA 625
Query: 626 VAHN-MIIVSTSNPCFLFILG-VRSLSVSH-YEIYEMQHMRLQSELSCISIPQKHPERRK 682
+ + +++V+ S P + V+ S H + + + L+ E+SCIS+P+ +
Sbjct: 626 CSRDGLLLVAISKPNSIQSFNIVQDDSNDHGLSLKLLNSIPLEFEVSCISLPKFNENE-- 683
Query: 683 SSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTM 742
L I T ++GT+ ++ +L+F + ++L S T
Sbjct: 684 --------------ILDKENQIFNTCIVGTYLMNIFILNF---KFNKILYS----FNETE 722
Query: 743 GTAISGCIPQDVRLVLADQ------------------------FYVLAGLRNGMLLRFEW 778
+ IP + L + +Q F ++ GLR+G+LL+F+
Sbjct: 723 ENQVINAIPNSILLSILNQLNQNQQKSNHLNQQPEKKNRDEINFKLICGLRDGLLLKFDI 782
Query: 779 PPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPV 838
+++ S F+ ++NI S + I +PV
Sbjct: 783 ------------LYNLHSNCFKVSKNIYS-----------------------KSISSSPV 807
Query: 839 FLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAE 898
++ + L+ + L+D+P+ + + ++ ++ ISF+ + CS L+ +E
Sbjct: 808 TVLSV---LNQGAMVLTDQPYYITSIKNHISLCKISFK-NDKMISYCS-------LYYSE 856
Query: 899 NS 900
NS
Sbjct: 857 NS 858
>gi|68060004|ref|XP_671977.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56488645|emb|CAI04030.1| hypothetical protein PB301494.00.0 [Plasmodium berghei]
Length = 346
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Query: 458 RLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LR 513
L I +++PI+DM ++D + Q++A CG P SLRI++ G+S+E+L L
Sbjct: 182 NLYLVDQIYSLSPIVDMKILDAKNSNIPQIYALCGRGPRSSLRILQHGLSIEELANNELP 241
Query: 514 TAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
P Y WT++ S Y ++++SF T +L +G +V DS+ +V T+
Sbjct: 242 GKPRY-----IWTIKKDNSSEYDGYIIVSFEGNTLILEIGETVEEVYDSL-LLTNVTTIH 295
Query: 574 CGLVADGLLVQIHQNAVR 591
L+ D +Q++ +R
Sbjct: 296 INLLYDNSFIQVYDTGIR 313
>gi|449295711|gb|EMC91732.1| hypothetical protein BAUCODRAFT_116696 [Baudoinia compniacensis
UAMH 10762]
Length = 1148
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 132/298 (44%), Gaps = 26/298 (8%)
Query: 393 KMVFCVDTGEFFMIEIAFGSDG-HKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMV 451
+ V D G+ +++ + + G + H + L + L++++ + GD V
Sbjct: 298 RYVLADDYGKLYLLFVLQNNTGEYAGHRLDILGQTSRANTLVYLDAGRIFVGSHQGDSQV 357
Query: 452 LKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFACCGVAPEGSLR 500
++ + NIAPILD +++D + D ++ G +GSLR
Sbjct: 358 IQISEQSMEVVQTFANIAPILDFTIMDMGNRSSDAPVNEFSSGQARIVTGSGAYKDGSLR 417
Query: 501 IIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTD 558
+RSG+ LE + + ++ +++R + LV+ FV TRV R ++ +
Sbjct: 418 SVRSGVGLEDVGSIGEMGAPVSAMFSLRSSPESHFVDTLVVGFVSYTRVFRFDVDGEVEE 477
Query: 559 VTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPE 617
V GF +L G +DG +VQ+ +AV +V+H+ + + +SW P+
Sbjct: 478 VDHLGGFELAAASLYAGNTSDGRIVQVTGSAV------IVSHTE----TRTITSSWSLPD 527
Query: 618 HVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQ 675
SI+ A + ++VS L +L + ++S E + + ++SCI++ +
Sbjct: 528 GRSITAVAAEGDSLLVSIGG-AELVVLDLSNVSSERLEARTRRTFESEEQVSCIALSK 584
>gi|346971485|gb|EGY14937.1| pre-mRNA-splicing factor RSE1 [Verticillium dahliae VdLs.17]
Length = 1230
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L I ++ P++D V + E Q++ CG + RI++ G+ + +++ A
Sbjct: 432 LALVESIDSMNPLIDCKVANLTGEDAPQIYTACGNGARSTFRILKHGLEVNEIV--ASEL 489
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
GI + WT+++ D Y +++VLSF T VL +G +V DS GF V TLA L+
Sbjct: 490 PGIPSAVWTLKLSRGDQYDAYIVLSFTNATLVLSIGETVEEVNDS-GFLTSVPTLAAQLL 548
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTS 636
L+Q+H +R V W P+H SI + + V+ S
Sbjct: 549 GGEGLIQVHPKGIRHIRNGQV-------------NEWAAPQHRSIVAATTNEHQVAVALS 595
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
+ ++ S++ Y+ + + ++C+S+ + PE R SS
Sbjct: 596 SGEIVYFEMDSDGSLAEYD----EKKEMFGTVTCLSLGEV-PEGRLRSS 639
>gi|302406266|ref|XP_003000969.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
gi|261360227|gb|EEY22655.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
Length = 1059
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L I ++ P++D V + E Q++ CG + RI++ G+ + +++ A
Sbjct: 414 LALVESIDSMNPLIDCKVANLTGEDAPQIYTACGNGARSTFRILKHGLEVNEIV--ASEL 471
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
GI + WT+++ D Y +++VLSF T VL +G +V DS GF V TLA L+
Sbjct: 472 PGIPSAVWTLKLSRGDQYDAYIVLSFTNATLVLSIGETVEEVNDS-GFLTSVPTLAAQLL 530
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTS 636
L+Q+H +R V W P+H SI + + V+ S
Sbjct: 531 GGEGLIQVHPKGIRHIRNGQV-------------NEWAAPQHRSIVAATTNEHQVAVALS 577
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
+ ++ S++ Y+ + + ++C+S+ + PE R SS
Sbjct: 578 SGEIVYFEMDSDGSLAEYD----EKKEMFGTVTCLSLGEV-PEGRLRSS 621
>gi|367027320|ref|XP_003662944.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
42464]
gi|347010213|gb|AEO57699.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
42464]
Length = 1211
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 107/231 (46%), Gaps = 27/231 (11%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I ++ P++D V + E Q++A CG + R+++ G+ + +++ +
Sbjct: 414 LVLVESIDSMNPLVDCKVANLTGEDAPQIYAVCGNRARSTFRMLKHGLEVSEIVASE--- 470
Query: 519 QGITGT----WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ GT WT ++ D Y ++VLSF T VL +G +VT+S GF V TLA
Sbjct: 471 --LPGTPAAVWTTKLTKYDEYDGYIVLSFTNATLVLSIGETVEEVTES-GFLTSVPTLAV 527
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R + V +P P+H SI A N ++++
Sbjct: 528 QQMGEEGLIQVHPKGIRHIVQGRVNE-------WPA-----PQHRSIVAAATNENQVVIA 575
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
S+ ++ S++ Y+ + + ++ +SI K PE + SS
Sbjct: 576 LSSGEIVYFEMDADGSLAEYD----EKKEMSGTVTSLSI-GKVPEGLRRSS 621
>gi|444722328|gb|ELW63026.1| Splicing factor 3B subunit 3 [Tupaia chinensis]
Length = 840
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 152/390 (38%), Gaps = 90/390 (23%)
Query: 522 TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGL 581
WTVR + D + +++++SFV T VL +G +VTDS GF TL+C L+ D
Sbjct: 128 NAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLGDDA 186
Query: 582 LVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFL 641
LVQ++ + +R I V P +I AV ++++ + +
Sbjct: 187 LVQVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGGELV 235
Query: 642 FILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPALPA 700
+ S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 236 YFEMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN-------- 283
Query: 701 GVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCIPQD 753
+V ++S P + L+ L+ S+ + GT + +
Sbjct: 284 ---------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGER 328
Query: 754 VRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATS 813
+ Y+ GL+NG+LLR + P++ +T
Sbjct: 329 GSIGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR---------- 361
Query: 814 SFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSI 873
TR +G PV L + ++A+S R WL + + T +
Sbjct: 362 ----------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPL 405
Query: 874 SFQPSTHATPVCSVECPKGILFVAENSLNL 903
S++ A+ S +CP+GI+ ++ N+L +
Sbjct: 406 SYETLEFASGFASEQCPEGIVAISTNTLRI 435
>gi|451856466|gb|EMD69757.1| hypothetical protein COCSADRAFT_32431 [Cochliobolus sativus ND90Pr]
Length = 1116
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 146/328 (44%), Gaps = 39/328 (11%)
Query: 366 DSDSGNAK-EPSKHVCSW-SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECL 423
D +SG + EP + +WE + + V D G +M + + G +V +
Sbjct: 254 DDESGELQTEPLDEATIFVAWERIDAQ--RFVLADDYGRLYMFMLVLNAQG-RVQSWKLD 310
Query: 424 YKGPPCKA--LLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY-- 479
G +A L++++ ++ GD V++ + NIAPILD +++D
Sbjct: 311 VIGQTSRASTLVYLDAGYVFVGSHQGDSQVIRIAEKSMEIVQTFSNIAPILDFTIMDMGN 370
Query: 480 ---------HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMK 530
+ + ++ G +GSLR +RSG+ LE L + + I+ ++++
Sbjct: 371 RSGEGQTNEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDLGVLGEM-EHISELFSLKST 429
Query: 531 VSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQN 588
S Y L++SFV+E+RV R +V + V D TLA + G +VQ+
Sbjct: 430 ASAQYIDTLLVSFVDESRVFRFDSQGEVEEVDEFVSLALDETTLAAANIPQGRIVQVTNG 489
Query: 589 AVRLCMPTMVAHSGGIPLSYPVCTSWFP-EHVSISLGAVAHNMIIVSTSNPCFLFILGVR 647
R+C GG+ + + W P + +I+ +V ++VS +
Sbjct: 490 RARIC-----DLDGGM-----ITSEWVPTDGKTITAASVNETHVLVSLGGVTIV------ 533
Query: 648 SLSVSH-YEIYEMQHMRLQSELSCISIP 674
SLS+++ ++ + + +S+++C+++P
Sbjct: 534 SLSMANGLQVVKEKTFGAESQVACVTLP 561
>gi|401883281|gb|EJT47496.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 1216
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 97/454 (21%), Positives = 169/454 (37%), Gaps = 97/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRD--QMFACCGVAPEGSLRIIRSGISLEKLLRTAP 516
L+ + ++ PILD VV+ D Q++A CG P + R ++ G+ + L+ + P
Sbjct: 411 LLLADTLSSLDPILDAQVVNLLGNASDTPQIYAACGRGPRSTFRSLKHGLDINVLVES-P 469
Query: 517 IYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
+ WT+++ D Y S++VLSF T VL +G +V D+ GF TLA
Sbjct: 470 LPGVPNAVWTLKLSEDDEYDSYIVLSFPNGTLVLSIGETIEEVNDT-GFLSSGPTLAVQQ 528
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H P + H I + V P +I N ++++ S
Sbjct: 529 LGSAGLLQVH--------PAGLRH---IRAADRVDEWNAPAGTTIVSATTNKNQVVIALS 577
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
++ S++ Y+ + L +C+SI RR++ P
Sbjct: 578 TQELVYFELDEEGSLNEYQ----ERKSLPGNATCVSIADVPEGRRRT------------P 621
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGC 749
L +G +V ++S P L L+ I L T+I
Sbjct: 622 YL----------AVGCDNQTVHIISLEPDNTLETLSLQALTAPPSDICLAEIFDTSIDKN 671
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
++ GL NG+LLR + V P+ +S T
Sbjct: 672 ---------RATMFLTIGLLNGVLLR----------TVVDPVDGSLSDT----------- 701
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
R +G P +V + ++A S R WLL T + L
Sbjct: 702 -------------------RLRFLGSKPPRIVRSAVHGSPAVMAFSSRTWLLYTYQDLLQ 742
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ + +A + + CP G++ ++ N+L +
Sbjct: 743 TQPLIYDMLEYACNLSAAMCPDGLIGISGNTLRI 776
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFC-NEMH 134
G + S+C FGT++++A A MGKD +V+ SDSG+LS + +
Sbjct: 48 GQLDSICSSEAFGTVRNVA---------AFRLAGMGKDYIVLSSDSGRLSIIELVISPTP 98
Query: 135 RFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
F + Q G+ R G+ LAVD G
Sbjct: 99 HFESLYQEVYGKSGSRRTIPGQFLAVDPKG 128
>gi|255084688|ref|XP_002504775.1| predicted protein [Micromonas sp. RCC299]
gi|226520044|gb|ACO66033.1| predicted protein [Micromonas sp. RCC299]
Length = 1202
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 32 YLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDG----IVQSVCEQAVF 87
++ V+ + V G R P NDVV GK ++L+++ G ++ +Q +
Sbjct: 33 FVVDQVVSSASVTHAVWGRFRRPDVNDVVLGKTDQLQLLVLAPAGDGTERMRLAHQQPLH 92
Query: 88 GTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNP 147
GT+ DL V+P A G DLL ++SDSGKLS + F RF P+ Q+HL+ P
Sbjct: 93 GTLVDLRVIPC---ATANGGGSAGADLLGILSDSGKLSIVGFDRRTRRFAPIRQLHLAPP 149
Query: 148 G 148
G
Sbjct: 150 G 150
>gi|358366518|dbj|GAA83139.1| nuclear mRNA splicing factor [Aspergillus kawachii IFO 4308]
Length = 1209
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 37/263 (14%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV T I ++ P++D VV+ ++ Q++ G S R ++ G+ + +++ +
Sbjct: 409 ENLNLVET--INSLNPLIDSKVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ SD + ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRSDEFDAYIILSFANGTLVLSIGETVEEVTDT-GFLSTAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+QIH +R + + +P P+H SI A + V+
Sbjct: 525 QQLGEDSLIQIHPRGIRHILADRRVN------EWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS--------- 685
S+ ++ S++ Y+ + ++ ++C+S+ + PE R SS
Sbjct: 574 LSSGEIVYFEMDSDGSLAEYD----ERRQMSGTVTCLSLGEV-PEGRVRSSFLAVGCDDS 628
Query: 686 --------PISLVSNSSVPALPA 700
P S + N SV AL A
Sbjct: 629 TVRILSLDPDSTLENKSVQALTA 651
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G V + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVTPLFSQDVFGIIRSLAA------FRLAGSS---KDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G C+IA
Sbjct: 105 F---NRIHLETFGKSGVRRVIPGQYLAVDPKGRACIIA 139
>gi|301121252|ref|XP_002908353.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
gi|262103384|gb|EEY61436.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
Length = 1150
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 174/445 (39%), Gaps = 86/445 (19%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D V+D + + Q+ C G +G+LR+IR+GI + + + + GI G W
Sbjct: 347 NVGPIIDFCVMDLDRQGQGQIVTCSGADKDGTLRVIRNGIGINE--QASAELPGIKGMWA 404
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
+R + + FL+ S+V E R+L +G + +V TL C + +Q+
Sbjct: 405 LRETFAAEHDKFLLQSYVSEVRILAIGDEDEMEEKEIPAFTNVKTLLCRNMYGDYWLQVT 464
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGV 646
++ VRL + + S P S I++ A + V+TS ++
Sbjct: 465 ESEVRLISCSSFSLS---STWSPASGS------RITVAAANPTQVAVATSGGVLVY---- 511
Query: 647 RSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGY 706
L + + ++ E ++++ EL+C+ I P +G G
Sbjct: 512 --LEIENGQVVEKTTVKMEHELACVDI---------------------TPLTSSGAGDGD 548
Query: 707 TFVIG--THRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV--RLVLADQF 762
+ G TH + S + GL S ++ T+ + + D+ R VL + F
Sbjct: 549 VAMTGSSTHWDMAALRSTLCVVGLWTSFSVCVLQLPTLEKRTTEALGTDLLPRSVLCNTF 608
Query: 763 ----YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESK 818
Y+L GL +G L+ +E +++ G T S
Sbjct: 609 EGKDYLLVGLGDGSLMNYEL-------------------------DVQQGALGTRKRVSL 643
Query: 819 DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPS 878
P++L R +T VF A DRP ++ + + L Y++I+ +
Sbjct: 644 GSQPLSLSTF--RSKNMTHVF-------------AACDRPTVIYSNNNKLLYSNINSKEV 688
Query: 879 THATPVCSVECPKGILFVAENSLNL 903
P S P+ + +E L +
Sbjct: 689 NVMCPFDSESFPECLALSSEEELTI 713
>gi|238609081|ref|XP_002397396.1| hypothetical protein MPER_02189 [Moniliophthora perniciosa FA553]
gi|215471757|gb|EEB98326.1| hypothetical protein MPER_02189 [Moniliophthora perniciosa FA553]
Length = 180
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 459 LVYTSPIQNIAPILDMSVVD-YHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
L I+++ PILD V++ + Q+FA CG SLR +R G+ +E+ + +
Sbjct: 21 LAIADEIESLCPILDSKVLNILPNSDTPQIFAVCGRGARSSLRTLRHGLEVEESVSSE-- 78
Query: 518 YQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
GI WT + + DP+ S+++LSFV T VL +G +V D+ GF TLA
Sbjct: 79 LPGIPNAVWTTKKREDDPFDSYIILSFVNGTLVLSIGETIEEVQDT-GFLSSAPTLAVQQ 137
Query: 577 VADGLLVQIHQNAVR 591
+ L+Q+H +R
Sbjct: 138 IGADALLQVHPGGIR 152
>gi|145240731|ref|XP_001393012.1| pre-mRNA-splicing factor rse1 [Aspergillus niger CBS 513.88]
gi|134077536|emb|CAK96680.1| unnamed protein product [Aspergillus niger]
Length = 1209
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 37/263 (14%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV T I ++ P++D VV+ ++ Q++ G S R ++ G+ + +++ +
Sbjct: 409 ENLNLVET--INSLNPLIDSKVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ SD + ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRSDEFDAYIILSFANGTLVLSIGETVEEVTDT-GFLSTAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+QIH +R + + +P P+H SI A + V+
Sbjct: 525 QQLGEDSLIQIHPRGIRHILADRRVN------EWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS--------- 685
S+ ++ S++ Y+ + ++ ++C+S+ + PE R SS
Sbjct: 574 LSSGEIVYFEMDSDGSLAEYD----ERRQMSGTVTCLSLGEV-PEGRVRSSFLAVGCDDS 628
Query: 686 --------PISLVSNSSVPALPA 700
P S + N SV AL A
Sbjct: 629 TVRILSLDPDSTLENKSVQALTA 651
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G V + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVTPLFSQDVFGIIRSLAA------FRLAGSS---KDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G C+IA
Sbjct: 105 F---NRIHLETFGKSGVRRVIPGQYLAVDPKGRACIIA 139
>gi|116191283|ref|XP_001221454.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
gi|88181272|gb|EAQ88740.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
Length = 979
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 34/301 (11%)
Query: 400 TGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEEN--- 456
TGE I++ + D V S C+ K E L F ++GD V N
Sbjct: 110 TGEVNCIKLRY-FDTVPVASSLCILKSGFLLVASEFENHHLYQFEQLGDDQVEFNSNRDI 168
Query: 457 ----------GRLVYTSPIQNIAPILDMSVVDYHD-EKRDQMFACCGVAPEGSLRIIRSG 505
G L I+++ PIL VV+ + + Q+++ CG RI+R G
Sbjct: 169 APVFFDPQPSGNLSLVETIESMNPILASGVVNLREGDDAPQIYSACGSGTRSHFRILRHG 228
Query: 506 ISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGF 565
+ + +++ + + ++ WT ++ D + ++++L+ +T VL +G V+DS GF
Sbjct: 229 LEVNEIV-ASELPGTVSAVWTTKLTSQDKHDTYIILTSSTDTLVLSIGEEVKQVSDS-GF 286
Query: 566 RPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGA 625
V TLA + D L Q+H +R + S I + +P P+H +I A
Sbjct: 287 LTSVSTLAIQQIGDDSLAQVHPKGIR-----HIRSSDQI-IEWPA-----PQHRTIVATA 335
Query: 626 VAHNMIIVS-TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS 684
+ V+ +S F L S++ Y+ E + ++C+S+ Q PE R S
Sbjct: 336 TNQRQVAVALSSGEIIYFELDDADGSLAEYDGRE----EMSGTVTCLSLGQV-PEGRLRS 390
Query: 685 S 685
S
Sbjct: 391 S 391
>gi|339259094|ref|XP_003369733.1| splicing factor 3B subunit 3 [Trichinella spiralis]
gi|316965959|gb|EFV50595.1| splicing factor 3B subunit 3 [Trichinella spiralis]
Length = 1241
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 178/446 (39%), Gaps = 85/446 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L+ + +++PI+ V D E Q++A CG P S++++R G+ + + + + +
Sbjct: 430 LIQVDELLSLSPIMSFEVADIVYEDTPQLYAACGRGPRSSIKVLRHGLEVTE-MAISELP 488
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WTV+ Y +++V+SFV T VL +G +VTDSV G+V
Sbjct: 489 GNPNAVWTVKKHQDAEYDAYIVVSFVNATLVLSIGETVEEVTDSV---------VLGVVD 539
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
VQI+ +R + +P +I + +
Sbjct: 540 ----VQIYPEGIRHIRCDRRVNEWKVP----------------------GRRVITNCAVN 573
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
C ++ + + ++E+ E + ++ ER++ + ++ + +P
Sbjct: 574 CRQVLIALNGGEIVYFELDEGGQL------------NEYTERKEMPCDVVAMALADIP-- 619
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSI-VLTNTMGTAISGCIPQDVRLV 757
P + + V T R +V V+S P + L L S+ + ++ A G + L
Sbjct: 620 PGEIRCRFLAVALTDR-TVRVISLDPSDCLTPLNMQSLPAMAQSLCIAAVGGDTMESTLF 678
Query: 758 LADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFES 817
L V NG+LLR + ++ ++T G+ F+
Sbjct: 679 LNIGLEV-NKFTNGVLLR--------------TVLDSVTGELQDTRTRYLGMKPVKLFKV 723
Query: 818 KDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQP 877
K + N+ ++ + ++ I IA+S R WLL + T +S+ P
Sbjct: 724 K--MHDNIAVMNSVQLNI----------------IAMSSRAWLLYKYQTRYHLTPLSYIP 765
Query: 878 STHATPVCSVECPKGILFVAENSLNL 903
+A+ S +CP+G++ +A NSL +
Sbjct: 766 LEYASNFASDQCPEGVVAIAGNSLRI 791
>gi|391867503|gb|EIT76749.1| splicing factor 3b, subunit 3 [Aspergillus oryzae 3.042]
Length = 1034
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 105/509 (20%), Positives = 188/509 (36%), Gaps = 112/509 (22%)
Query: 403 FFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYT 462
F+ E G D ++ S + P L + R SA EN LV T
Sbjct: 195 FYQFE-KLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSA------------ENLNLVET 241
Query: 463 SPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRTAPIY 518
I ++ P++D V + +E Q++ G + R ++ G+ + ++ L + P
Sbjct: 242 --INSLNPLIDSKVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVP-- 297
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WT ++ +D + ++++LSF T VL +G +VTD+ GF TLA +
Sbjct: 298 ---SAVWTTKLTRADEFDAYIILSFANGTLVLSIGETVEEVTDT-GFLSSAPTLAVQQLG 353
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ L+QIH +R M + +P P+H SI A + V+ S+
Sbjct: 354 EDSLIQIHPRGIRHIMADRRVN------EWPA-----PQHRSIVAAATNERQVAVALSSG 402
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ E+ ++ ERR+ S ++ +S V
Sbjct: 403 EIVYF-----------------------EMDADGTLAEYDERRQMSGTVTCLSLGEV--- 436
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVL 758
P G + +G +V +LS P L + S+ +A++ +
Sbjct: 437 PEGRVRSSFLAVGCDDSTVRILSLDPDS---TLENKSVQALTAAPSALN-IMSMSDSSSG 492
Query: 759 ADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESK 818
Y+ GL +G+ LR + ++ +T
Sbjct: 493 GTTLYLHIGLYSGVYLR--------------TVLDEVTGELSDTR--------------- 523
Query: 819 DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL----LQTARHSLAYTSIS 874
TR +G PV L +S ++ALS RPWL +QT L T +
Sbjct: 524 -----------TRFLGSKPVKLFQVSVKGQTAVLALSSRPWLGYSDIQTKGFML--TPLD 570
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
+ P S +C +G++ + +L +
Sbjct: 571 YVPLEWGWNFSSEQCLEGMVGIQGQNLRI 599
>gi|350630003|gb|EHA18376.1| hypothetical protein ASPNIDRAFT_38018 [Aspergillus niger ATCC 1015]
Length = 1219
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 37/263 (14%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV T I ++ P++D VV+ ++ Q++ G S R ++ G+ + +++ +
Sbjct: 409 ENLNLVET--INSLNPLIDSKVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ SD + ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRSDEFDAYIILSFANGTLVLSIGETVEEVTDT-GFLSTAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+QIH +R + + +P P+H SI A + V+
Sbjct: 525 QQLGEDSLIQIHPRGIRHILADRRVN------EWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS--------- 685
S+ ++ S++ Y+ + ++ ++C+S+ + PE R SS
Sbjct: 574 LSSGEIVYFEMDSDGSLAEYD----ERRQMSGTVTCLSLGEV-PEGRVRSSFLAVGCDDS 628
Query: 686 --------PISLVSNSSVPALPA 700
P S + N SV AL A
Sbjct: 629 TVRILSLDPDSTLENKSVQALTA 651
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G V + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVTPLFSQDVFGIIRSLAA------FRLAGSS---KDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G C+IA
Sbjct: 105 F---NRIHLETFGKSGVRRVIPGQYLAVDPKGRACIIA 139
>gi|347829304|emb|CCD45001.1| similar to pre-mRNA-splicing factor rse1 [Botryotinia fuckeliana]
Length = 1212
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 39/262 (14%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++D V + DE Q+++ CG + R ++ G+ + +++ +
Sbjct: 412 ENLSLVES--IDSMNPLMDCKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVES 469
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
G+ + WT ++ D Y ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 470 E--LPGVPSAVWTTKLTRGDTYDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLA 526
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIV 633
+ + L+Q+H +R I + V P+H SI + V
Sbjct: 527 VQQLGEDSLIQVHPKGIR-----------HIRADHRVNEWAAPQHRSIVAATTNERQVAV 575
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS-------- 685
+ S+ ++ S++ Y+ + + ++C+S+ + PE R+ S
Sbjct: 576 ALSSGEIVYFEMDSDGSLAEYD----EKKEMSGTVTCLSLGEV-PEGRQRSQFLAVGCDD 630
Query: 686 ---------PISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 631 STVRILSLDPDSTLENKSVQAL 652
>gi|393245024|gb|EJD52535.1| hypothetical protein AURDEDRAFT_111199 [Auricularia delicata
TFB-10046 SS5]
Length = 1214
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/448 (19%), Positives = 176/448 (39%), Gaps = 84/448 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRD--QMFACCGVAPEGSLRIIRSGISLEKLLRTAP 516
L+ + +I PI+D V++ D Q + CG S R++R G+ +E+ + ++
Sbjct: 410 LLLCDSLDSINPIIDAKVLNLMPTISDTPQFYVACGRGARSSFRLLRHGLEVEENI-SSD 468
Query: 517 IYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG 575
+ GI WT +++ DP+ +++VLSFV T VL +G + ++ GF TL
Sbjct: 469 LPSGIPNAVWTTKIRADDPFDTYIVLSFVNGTLVLTIGETIEECQET-GFLSAEPTLGVQ 527
Query: 576 LVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVST 635
+ D L+Q++ + +R + + +P IV
Sbjct: 528 QIGDDALLQVYPHGIRHILADKRVNEWKVP----------------------SGKTIVQA 565
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
+ ++ + S + ++E + L +L+ ++ +R+ S + +S + V
Sbjct: 566 ATNSRQVVVALNSAELVYFE------LDLDGQLN------EYQDRKAMGSVVLALSMAEV 613
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVR 755
P G +G +V ++S P L ++ ++ + I I V
Sbjct: 614 ---PEGCQRTPYLAVGCEDQTVRIISLDPDNTLETISLQALTAPPS-AICIVAMIDAAVN 669
Query: 756 LVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSF 815
+ ++ +V GL NG+ LR + P++ +T
Sbjct: 670 KI-SETLFVNIGLTNGLFLR--------------TVLDPVTGELTDTR------------ 702
Query: 816 ESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISF 875
TR +G P+ L ++ + ++ALS R WL + +L T + F
Sbjct: 703 --------------TRFLGTRPIRLNRVTIAGKPALLALSSRMWLNYAHQEALHLTPLIF 748
Query: 876 QPSTHATPVCSVECPKGILFVAENSLNL 903
P + + + CP G + + +++ +
Sbjct: 749 DPLDYVSGFTADLCPDGFIGLKGSTIKI 776
>gi|154295205|ref|XP_001548039.1| pre-mRNA splicing factor 3b [Botryotinia fuckeliana B05.10]
Length = 1020
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 39/262 (14%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++D V + DE Q+++ CG + R ++ G+ + +++ +
Sbjct: 412 ENLSLVES--IDSMNPLMDCKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVES 469
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
G+ + WT ++ D Y ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 470 E--LPGVPSAVWTTKLTRGDTYDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLA 526
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIV 633
+ + L+Q+H +R I + V P+H SI + V
Sbjct: 527 VQQLGEDSLIQVHPKGIR-----------HIRADHRVNEWAAPQHRSIVAATTNERQVAV 575
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS-------- 685
+ S+ ++ S++ Y+ + + ++C+S+ + PE R+ S
Sbjct: 576 ALSSGEIVYFEMDSDGSLAEYD----EKKEMSGTVTCLSLGEV-PEGRQRSQFLAVGCDD 630
Query: 686 ---------PISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 631 STVRILSLDPDSTLENKSVQAL 652
>gi|400597418|gb|EJP65151.1| CPSF A subunit region [Beauveria bassiana ARSEF 2860]
Length = 1212
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 132/324 (40%), Gaps = 52/324 (16%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + P N P+LD V + E Q+++ CG + R I+ G+ + +++
Sbjct: 412 ENLALVDSIPAMN--PLLDCKVANLTGEDAPQIYSICGNGARSTFRTIKHGLEVNEIV-- 467
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
A G+ + WT+++ + Y +++VLSF T VL +G +V+DS GF V T+A
Sbjct: 468 ASELPGVPSAVWTLKLNSDEQYDTYIVLSFTNGTLVLSIGETVEEVSDS-GFLTSVPTIA 526
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAV-AHNMI 631
L+ L+Q+H +R +G + W P+H SI + AH +
Sbjct: 527 AQLLGTDGLIQVHPRGIRHI------RNGNV-------NEWSAPQHRSIVAASTNAHQVA 573
Query: 632 IVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVS 691
I +S F + + E EM V+
Sbjct: 574 IALSSGEIVYFEMDSDGSLAEYDEKKEM---------------------------FGTVT 606
Query: 692 NSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIP 751
S+ +P G + +G +V +LS P+ L + S+ T+++ IP
Sbjct: 607 ALSLGEVPEGRVRSSFLAVGCDDATVRILSLDPES---TLENKSVQALTAAPTSLA-IIP 662
Query: 752 QDVRLVLADQFYVLAGLRNGMLLR 775
D Y+ GL +G+ LR
Sbjct: 663 MDDSSSGGSTLYLHIGLHSGVYLR 686
>gi|238487250|ref|XP_002374863.1| nuclear mRNA splicing factor, putative [Aspergillus flavus
NRRL3357]
gi|220699742|gb|EED56081.1| nuclear mRNA splicing factor, putative [Aspergillus flavus
NRRL3357]
Length = 1210
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 105/509 (20%), Positives = 188/509 (36%), Gaps = 112/509 (22%)
Query: 403 FFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYT 462
F+ E G D ++ S + P L + R SA EN LV T
Sbjct: 370 FYQFE-KLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSA------------ENLNLVET 416
Query: 463 SPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRTAPIY 518
I ++ P++D V + +E Q++ G + R ++ G+ + ++ L + P
Sbjct: 417 --INSLNPLIDSKVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVP-- 472
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WT ++ +D + ++++LSF T VL +G +VTD+ GF TLA +
Sbjct: 473 ---SAVWTTKLTRADEFDAYIILSFANGTLVLSIGETVEEVTDT-GFLSSAPTLAVQQLG 528
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ L+QIH +R M + +P P+H SI A + V+ S+
Sbjct: 529 EDSLIQIHPRGIRHIMADRRVN------EWPA-----PQHRSIVAAATNERQVAVALSSG 577
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ E+ ++ ERR+ S ++ +S V
Sbjct: 578 EIVYF-----------------------EMDADGTLAEYDERRQMSGTVTCLSLGEV--- 611
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVL 758
P G + +G +V +LS P L + S+ +A++ +
Sbjct: 612 PEGRVRSSFLAVGCDDSTVRILSLDPDS---TLENKSVQALTAAPSALN-IMSMSDSSSG 667
Query: 759 ADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESK 818
Y+ GL +G+ LR + ++ +T
Sbjct: 668 GTTLYLHIGLYSGVYLR--------------TVLDEVTGELSDTR--------------- 698
Query: 819 DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL----LQTARHSLAYTSIS 874
TR +G PV L +S ++ALS RPWL +QT L T +
Sbjct: 699 -----------TRFLGSKPVKLFQVSVKGQTAVLALSSRPWLGYSDIQTKGFML--TPLD 745
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
+ P S +C +G++ + +L +
Sbjct: 746 YVPLEWGWNFSSEQCLEGMVGIQGQNLRI 774
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G V + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVTPLFSQDVFGIIRSLAA------FRLAGSN---KDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVIPGQYLAVDPKGRACLIA 139
>gi|406698009|gb|EKD01256.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 8904]
Length = 1216
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 97/454 (21%), Positives = 169/454 (37%), Gaps = 97/454 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRD--QMFACCGVAPEGSLRIIRSGISLEKLLRTAP 516
L+ + ++ PILD VV+ D Q++A CG P + R ++ G+ + L+ + P
Sbjct: 411 LLLADTLSSLDPILDAQVVNLLGNASDTPQIYAACGRGPRSTFRSLKHGLDVNVLVES-P 469
Query: 517 IYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
+ WT+++ D Y S++VLSF T VL +G +V D+ GF TLA
Sbjct: 470 LPGVPNAVWTLKLSEDDEYDSYIVLSFPNGTLVLSIGETIEEVNDT-GFLSSGPTLAVQQ 528
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H P + H I + V P +I N ++++ S
Sbjct: 529 LGSAGLLQVH--------PAGLRH---IRAADRVDEWNAPAGTTIVSATTNKNQVVIALS 577
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVP 696
++ S++ Y+ + L +C+SI RR++ P
Sbjct: 578 TQELVYFELDEEGSLNEYQ----ERKSLPGNATCVSIADVPEGRRRT------------P 621
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISGC 749
L +G +V ++S P L L+ I L T+I
Sbjct: 622 YL----------AVGCDNQTVHIISLEPDNTLETLSLQALTAPPSDICLAEIFDTSIDKN 671
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
++ GL NG+LLR + V P+ +S T
Sbjct: 672 ---------RATMFLTIGLLNGVLLR----------TVVDPVDGSLSDT----------- 701
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLA 869
R +G P +V + ++A S R WLL T + L
Sbjct: 702 -------------------RLRFLGSKPPRIVRSAVHGSPAVMAFSSRTWLLYTYQDLLQ 742
Query: 870 YTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ + +A + + CP G++ ++ N+L +
Sbjct: 743 TQPLIYDMLEYACNLSAAMCPDGLIGISGNTLRI 776
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFC-NEMH 134
G + S+C FGT++++A A MGKD +V+ SDSG+LS + +
Sbjct: 48 GQLDSICSSEAFGTVRNVA---------AFRLAGMGKDYIVLSSDSGRLSIIELVISPTP 98
Query: 135 RFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
F + Q G+ R G+ LAVD G
Sbjct: 99 HFESLYQEVYGKSGSRRTIPGQFLAVDPKG 128
>gi|320163506|gb|EFW40405.1| UV-damaged DNA binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1123
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 28/242 (11%)
Query: 445 EMGDGMVLK-----EENGRLVYT-SPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGS 498
+ GD +L+ +E G V N+ PI DM+VVD + + Q+ C G +GS
Sbjct: 371 QFGDSQLLRLATERDETGSFVRVLESFSNLGPICDMAVVDLERQGQCQVVTCSGAFKDGS 430
Query: 499 LRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTD 558
LR++R+G+ +E+ + GI G W+++ + Y S LV+SF+ ETR+L G++ +
Sbjct: 431 LRVVRNGVGIEE--QATIELPGIKGIWSLKPTEAALYRSILVVSFIGETRLL--GMSSGE 486
Query: 559 VTDSV---GFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF 615
+ + G + TL C V+ +Q+ VRL + A + SW
Sbjct: 487 ELEEMQIPGLDQNSQTLHCANVSGDQFLQVTATEVRLVNCSTQA----------LVASWS 536
Query: 616 PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYE----IYEMQHMRLQSELSCI 671
P V A + + S+++ L G L E + + H R+ E++C+
Sbjct: 537 PASVPDRY-APGTRITMASSNDFQVLVACGGGHLVCLSVEASGNLVPIGHARMDHEIACV 595
Query: 672 SI 673
I
Sbjct: 596 DI 597
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 41 SVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNK 100
SVV V G+ +P +++ K T IE+ I DGI + + ++G I A++ +
Sbjct: 37 SVVTHVVTGNFTAPHERNLIIAKSTRIEIHTIAADGI-HGLLDAGMYGRI---AIMQLFR 92
Query: 101 KFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAV 160
NAQ +DLL + ++ + LA+ + A L + + LG + +
Sbjct: 93 PPNAQ------QDLLFICTERYAFTVLAYDAQTGELVTKANGDLQDKSGNPADLGPIGVI 146
Query: 161 DSSGCLIAVSAYEDRLG 177
D LI +A D G
Sbjct: 147 DPDCRLIGENAALDLWG 163
>gi|317143715|ref|XP_001819645.2| pre-mRNA-splicing factor rse1 [Aspergillus oryzae RIB40]
Length = 1209
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 105/509 (20%), Positives = 188/509 (36%), Gaps = 112/509 (22%)
Query: 403 FFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYT 462
F+ E G D ++ S + P L + R SA EN LV T
Sbjct: 370 FYQFE-KLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSA------------ENLNLVET 416
Query: 463 SPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRTAPIY 518
I ++ P++D V + +E Q++ G + R ++ G+ + ++ L + P
Sbjct: 417 --INSLNPLIDSKVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVP-- 472
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WT ++ +D + ++++LSF T VL +G +VTD+ GF TLA +
Sbjct: 473 ---SAVWTTKLTRADEFDAYIILSFANGTLVLSIGETVEEVTDT-GFLSSAPTLAVQQLG 528
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ L+QIH +R M + +P P+H SI A + V+ S+
Sbjct: 529 EDSLIQIHPRGIRHIMADRRVN------EWPA-----PQHRSIVAAATNERQVAVALSSG 577
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ E+ ++ ERR+ S ++ +S V
Sbjct: 578 EIVYF-----------------------EMDADGTLAEYDERRQMSGTVTCLSLGEV--- 611
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVL 758
P G + +G +V +LS P L + S+ +A++ +
Sbjct: 612 PEGRVRSSFLAVGCDDSTVRILSLDPDS---TLENKSVQALTAAPSALN-IMSMSDSSSG 667
Query: 759 ADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESK 818
Y+ GL +G+ LR + ++ +T
Sbjct: 668 GTALYLHIGLYSGVYLR--------------TVLDEVTGELSDTR--------------- 698
Query: 819 DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL----LQTARHSLAYTSIS 874
TR +G PV L +S ++ALS RPWL +QT L T +
Sbjct: 699 -----------TRFLGSKPVKLFQVSVKGQTAVLALSSRPWLGYSDIQTKGFML--TPLD 745
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
+ P S +C +G++ + +L +
Sbjct: 746 YVPLEWGWNFSSEQCLEGMVGIQGQNLRI 774
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G V + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVTPLFSQDVFGIIRSLAA------FRLAGSN---KDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVIPGQYLAVDPKGRACLIA 139
>gi|340520436|gb|EGR50672.1| predicted protein [Trichoderma reesei QM6a]
Length = 1212
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 38/260 (14%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I ++ P+LD + + E Q++ CG + R ++ G+ + +++ +
Sbjct: 414 LVLVESIPSMNPLLDCKIANLTGEDAPQIYTICGNGARSTFRTLKHGLEINEIVSSE--L 471
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
GI + WT+++ ++ Y +++VLSF T VL +G +V+DS GF V TLA L+
Sbjct: 472 PGIPSAVWTLKLNRNEQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTSVPTLAAQLL 530
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTS 636
+ L+Q+H +R V W P+H SI + + ++ S
Sbjct: 531 GEDGLIQVHPKGIRHIRNGQV-------------NQWDAPQHRSIVAATTNAHQVAIALS 577
Query: 637 NPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS------------ 684
+ ++ S++ Y+ + + ++C+S+ + R +SS
Sbjct: 578 SGEIVYFEMDDDGSLAEYD----EKKEMFGTVTCLSLGEVPEGRLRSSFLAVGCDDCTVR 633
Query: 685 ----SPISLVSNSSVPALPA 700
P S + N SV AL A
Sbjct: 634 ILSLDPESTLENKSVQALTA 653
>gi|406602265|emb|CCH46158.1| Pre-mRNA-splicing factor [Wickerhamomyces ciferrii]
Length = 1123
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 139/308 (45%), Gaps = 55/308 (17%)
Query: 470 PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITG-TWTVR 528
P++D +V +D+ ++++ GV SL+I++ G+S+ +++ + GI WT +
Sbjct: 398 PLIDSKLV--NDDAFTKIYSLSGVKDSSSLKILQYGLSINEIVESD--LPGIANKVWTTK 453
Query: 529 MKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQN 588
+ +D + +LV+SF++ T VL +G N ++TDS G + T+ + LVQIH N
Sbjct: 454 LNKNDEFDKYLVISFMDTTLVLSIGENVEEITDS-GLALNEETIGIQQIGINSLVQIHSN 512
Query: 589 AVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRS 648
+R + + W P + I++TS +G+ +
Sbjct: 513 GIRNIK------------NGELINEWQP----------PAGIKILTTSTTNRQIAIGLSN 550
Query: 649 LSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTF 708
+ ++E+ + + ++ ER++ +S I + S+ +P G +
Sbjct: 551 DELVYFEVDDRDRLI------------EYNERKELTSRIVSL---SLGDIPEGRLRSPFL 595
Query: 709 VIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV-RLVLADQFYVLAG 767
++G ++ VLS P L +L+ ++ IP D+ L + +Q +V G
Sbjct: 596 IVGCQDSTIRVLSTDPGSTLELLSLQAL-----------SSIPFDILTLSMNNQLFVNIG 644
Query: 768 LRNGMLLR 775
L NG+ +R
Sbjct: 645 LENGVYVR 652
>gi|325096432|gb|EGC49742.1| pre-mRNA-splicing factor Rse1 [Ajellomyces capsulatus H88]
Length = 1209
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 105/505 (20%), Positives = 186/505 (36%), Gaps = 120/505 (23%)
Query: 407 EIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQ 466
EI F SD + LSE L PP + R EN LV + I
Sbjct: 382 EIEFTSDAYSADLSEPL---PPA----YFRPR--------------PYENVNLVES--ID 418
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
++ P++D + + D+ Q++ CG S R ++ G+ + +++ + + + WT
Sbjct: 419 SLNPLMDCKIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESE-LPSVPSAVWT 477
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
++ D + ++++LSF T VL +G +VTD+ GF TLA + + L+Q+H
Sbjct: 478 TKLTREDEFDAYIILSFTNGTLVLSIGETVEEVTDT-GFLSSAPTLAVQQLGEDSLIQVH 536
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGV 646
+R H+ +P P+H SI + ++ S+ ++
Sbjct: 537 PKGIRHI------HADRRVNEWPA-----PQHRSIVAATTNERQVAIALSSGEIVYFEMD 585
Query: 647 RSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGY 706
S++ Y+ E+R S ++ +S V P G
Sbjct: 586 TDGSLAEYD-----------------------EKRAMSGTVTCLSLGEV---PRGRARSS 619
Query: 707 TFVIGTHRPSVEVLSFVPKEGL-----RVLASGSIVLT-NTMGTAISGCIPQDVRLVLAD 760
+G +V +LS P+ L + L S L+ M + SG
Sbjct: 620 FLAVGCDDSTVRILSLDPESTLENKSVQALTSAPSALSIMAMSDSTSG----------GS 669
Query: 761 QFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDE 820
Y+ GL +G+ LR DE
Sbjct: 670 TLYLHIGLYSGIYLR----------------------------------------TVLDE 689
Query: 821 LPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY--TSISFQPS 878
+ L TR +G+ PV L +S ++ALS RPWL + + A+ T + +
Sbjct: 690 VTGELSDTRTRFLGLKPVKLFQVSVKEQTAVLALSSRPWLGYSHLQTKAFMLTPLDYVSL 749
Query: 879 THATPVCSVECPKGILFVAENSLNL 903
S +C +G++ + +L +
Sbjct: 750 EWGWNFSSEQCVEGMVGIQGQNLRI 774
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G ++++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKIRTLFSQDVFGIIRALAA------FRLAGS---SKDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGIRRVIPGQYLAVDPKGRACLIA 139
>gi|351711389|gb|EHB14308.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]
Length = 273
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 436 EGRFLSAF-VEMGDGMVLKEENGR-LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGV 493
E FLSA +E GD + + LV + ++ PIL D +E Q++ CG
Sbjct: 125 EPEFLSAMPLEEGDTFFFQPRPLKNLVLVDELDSLLPILFCQTADLANEDTPQLYVACGR 184
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
P SLR++R G+ + + + + + WTV + D + +++++SF+ T VL +G
Sbjct: 185 GPRSSLRVLRHGLEVSE-MAVSELPGNPNAVWTVCRHIEDEFDAYIIVSFMNATLVLSIG 243
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
VTDS GF TL+C L+ D LV
Sbjct: 244 ETVGKVTDS-GFLGTTSTLSCSLLGDDALVH 273
>gi|255080490|ref|XP_002503825.1| predicted protein [Micromonas sp. RCC299]
gi|226519092|gb|ACO65083.1| predicted protein [Micromonas sp. RCC299]
Length = 1114
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 179/448 (39%), Gaps = 103/448 (22%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+D +VVD + Q+ C GV +GSLR++R+G+ + + R A G+ G W+
Sbjct: 361 NLGPIVDFAVVDLDRHGQGQVVTCSGVNKDGSLRVVRNGVGIHE--RAAIELPGVKGCWS 418
Query: 527 VRM--KVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSV------GFRPDVCTLACGLVA 578
+R + P + LV+SF ETR+L + D D + GF + TL V
Sbjct: 419 LRRGDASTHPSDTHLVVSFAGETRILAI-----DDDDELAECEFRGFSANEQTLCVCNVD 473
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSN 637
G +VQ + VRL V + G P + +W P ++S+ + +V+T+
Sbjct: 474 GGFVVQCVASGVRL-----VNAADGEPRA-----TWSPPGGATVSVASANRTQALVATTG 523
Query: 638 PCFLFILGVRSLSVSHYEIYEMQHMRLQS-ELSCISIPQKHPERRKSSSPISLVSNSSVP 696
L+ L + S ++ I E L E++C+ +P+S +++
Sbjct: 524 GS-LYSLALGSAAL----IRETASASLDGKEIACLDC-----------TPLSDPGDAAAR 567
Query: 697 ALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRL 756
G F++ + +V T+ +G G IP+ V L
Sbjct: 568 LCAVGTWTAEVFLL-------------------TMPDLRLVTTSPLGGGGGGVIPRAVLL 608
Query: 757 V-LADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSF 815
++LAGL +G L F P+ + T R+ +++ G
Sbjct: 609 CSFEGTPHLLAGLGDGALHTFGVDPE--------------AGTLRDGKSLSLGTQ----- 649
Query: 816 ESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISF 875
PI L+ R G T VF A SDRP ++ L Y++++
Sbjct: 650 ------PITLRTF--RSKGATHVF-------------AGSDRPTVIYGNNGKLIYSNVNL 688
Query: 876 QPSTHATPVCSVECPKGILFVAENSLNL 903
+ HA P P + +E+ L +
Sbjct: 689 REVLHACPFNCDAFPDSLALASESDLTI 716
>gi|83767504|dbj|BAE57643.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1270
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 105/509 (20%), Positives = 188/509 (36%), Gaps = 112/509 (22%)
Query: 403 FFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYT 462
F+ E G D ++ S + P L + R SA EN LV T
Sbjct: 370 FYQFE-KLGDDDEEIEFSSENFSADPSVPLEPIYFRPRSA------------ENLNLVET 416
Query: 463 SPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRTAPIY 518
I ++ P++D V + +E Q++ G + R ++ G+ + ++ L + P
Sbjct: 417 --INSLNPLIDSKVANLSEEDAPQIYTISGTGARSTFRTLKHGLEVSEIVDSELPSVP-- 472
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WT ++ +D + ++++LSF T VL +G +VTD+ GF TLA +
Sbjct: 473 ---SAVWTTKLTRADEFDAYIILSFANGTLVLSIGETVEEVTDT-GFLSSAPTLAVQQLG 528
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ L+QIH +R M + +P P+H SI A + V+ S+
Sbjct: 529 EDSLIQIHPRGIRHIMADRRVN------EWPA-----PQHRSIVAAATNERQVAVALSSG 577
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
++ E+ ++ ERR+ S ++ +S V
Sbjct: 578 EIVYF-----------------------EMDADGTLAEYDERRQMSGTVTCLSLGEV--- 611
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVL 758
P G + +G +V +LS P L + S+ +A++ +
Sbjct: 612 PEGRVRSSFLAVGCDDSTVRILSLDPDS---TLENKSVQALTAAPSALN-IMSMSDSSSG 667
Query: 759 ADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESK 818
Y+ GL +G+ LR + ++ +T
Sbjct: 668 GTALYLHIGLYSGVYLR--------------TVLDEVTGELSDTR--------------- 698
Query: 819 DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL----LQTARHSLAYTSIS 874
TR +G PV L +S ++ALS RPWL +QT L T +
Sbjct: 699 -----------TRFLGSKPVKLFQVSVKGQTAVLALSSRPWLGYSDIQTKGFML--TPLD 745
Query: 875 FQPSTHATPVCSVECPKGILFVAENSLNL 903
+ P S +C +G++ + +L +
Sbjct: 746 YVPLEWGWNFSSEQCLEGMVGIQGQNLRI 774
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G V + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVTPLFSQDVFGIIRSLAA------FRLAGSN---KDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVIPGQYLAVDPKGRACLIA 139
>gi|281208174|gb|EFA82352.1| UV-damaged DNA binding protein1 [Polysphondylium pallidum PN500]
Length = 1054
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTW- 525
N+ PI D VVD + + Q+ C G +GSLRIIR+GI + + + + GI G W
Sbjct: 310 NLGPITDFCVVDVEKQGQGQLVTCSGTFQDGSLRIIRNGIGIAE--QASIELPGIRGLWS 367
Query: 526 TVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQ 584
H L++SF+ T+VL + T+ GF + TL CG + +Q
Sbjct: 368 LSNNSNPSSLHRHLIVSFINSTKVLTFSGEEIEETEIAGFDSNATTLYCGNTTENNHFIQ 427
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVST-SNPCFLFI 643
I + + L + + + PE SI+L + + I++S SN +
Sbjct: 428 IATSGIYLVDSSSLMR----------LDQYTPEKGSINLASCNGSQILISQGSNLTY--- 474
Query: 644 LGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
L +S ++ + +LQ E+SC+ I
Sbjct: 475 -----LEISDSKLIIKKEAQLQYEISCLDI 499
>gi|145549784|ref|XP_001460571.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428401|emb|CAK93174.1| unnamed protein product [Paramecium tetraurelia]
Length = 1178
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRTAPIYQG 520
+ N + I D+ V D E Q++ CC +LR++R G+ + +L L+ P+
Sbjct: 395 LNNFSCISDLKVADLAKEGNPQIYICCAAGNRSTLRVLRHGLEITQLANTNLQAKPL--- 451
Query: 521 ITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADG 580
G WT++ + DP H ++V+S++ +T VL++G V D+ G T+ G + D
Sbjct: 452 --GIWTLKERYEDPVHKYIVISYINKTLVLKIGEKVEQVHDT-GLEGTKQTIHVGTLIDD 508
Query: 581 LLVQIHQNAVR 591
+QI N R
Sbjct: 509 SQIQILTNGYR 519
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 33 LAKCVLKGSVVLQVA-HGHLRSPTSNDVVFGKETSIELVIIGE-DGIVQSVCEQAVFGTI 90
L L+ S +Q A +G+ P + ++V K IEL+ I + +G ++++ Q VFG I
Sbjct: 3 LYSLTLQKSTGIQKAIYGNFSGPKAQEIVVSKVKHIELLKINDSNGKLETIASQEVFGII 62
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
+ + +F N +D LV+ SDSG++ L F + + F V Q G
Sbjct: 63 RSIHSF----RFPGNN-----RDNLVIGSDSGRVVVLGFDGQKNMFVKVHQETYGKTGCR 113
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLS 182
R G+ LA D G +SA E ++ L+
Sbjct: 114 RIVPGQYLACDPKGRAFMISAVEKHKFVYILT 145
>gi|225560964|gb|EEH09245.1| pre-mRNA-splicing factor rse1 [Ajellomyces capsulatus G186AR]
Length = 1209
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 105/505 (20%), Positives = 186/505 (36%), Gaps = 120/505 (23%)
Query: 407 EIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQ 466
EI F SD + LSE L PP + R EN LV + I
Sbjct: 382 EIEFTSDAYSADLSEPL---PPA----YFRPR--------------PYENVNLVES--ID 418
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
++ P++D + + D+ Q++ CG S R ++ G+ + +++ + + + WT
Sbjct: 419 SLNPLMDCKIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESE-LPSVPSAVWT 477
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
++ D + ++++LSF T VL +G +VTD+ GF TLA + + L+Q+H
Sbjct: 478 TKLTREDEFDAYIILSFTNGTLVLSIGETVEEVTDT-GFLSSAPTLAVQQLGEDSLIQVH 536
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGV 646
+R H+ +P P+H SI + ++ S+ ++
Sbjct: 537 PKGIRHI------HADRRVNEWPA-----PQHRSIVAATTNERQVAIALSSGEIVYFEMD 585
Query: 647 RSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGY 706
S++ Y+ E+R S ++ +S V P G
Sbjct: 586 TDGSLAEYD-----------------------EKRAMSGTVTCLSLGEV---PRGRARSS 619
Query: 707 TFVIGTHRPSVEVLSFVPKEGL-----RVLASGSIVLT-NTMGTAISGCIPQDVRLVLAD 760
+G +V +LS P+ L + L S L+ M + SG
Sbjct: 620 FLAVGCDDSTVRILSLDPESTLENKSVQALTSAPSALSIMAMSDSTSG----------GS 669
Query: 761 QFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDE 820
Y+ GL +G+ LR DE
Sbjct: 670 TLYLHIGLYSGIYLR----------------------------------------TVLDE 689
Query: 821 LPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY--TSISFQPS 878
+ L TR +G+ PV L +S ++ALS RPWL + + A+ T + +
Sbjct: 690 VTGELSDTRTRFLGLKPVKLFQVSVKEQTAVLALSSRPWLGYSHLQTKAFMLTPLDYVGL 749
Query: 879 THATPVCSVECPKGILFVAENSLNL 903
S +C +G++ + +L +
Sbjct: 750 EWGWNFSSEQCVEGMVGIQGQNLRI 774
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G ++++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKIRTLFSQDVFGIIRALAA------FRLAGS---SKDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGIRRVIPGQYLAVDPKGRACLIA 139
>gi|145510432|ref|XP_001441149.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408388|emb|CAK73752.1| unnamed protein product [Paramecium tetraurelia]
Length = 1174
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRTAPIYQG 520
+ N + I D+ V D E Q++ CC +LR++R G+ + +L L+ P+
Sbjct: 391 LNNFSCISDLKVADLAKEGNPQIYICCAAGNRSTLRVLRHGLEITQLANTNLQAKPL--- 447
Query: 521 ITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADG 580
G WT++ + DP H ++V+S++ +T VL++G V D+ G T+ G + D
Sbjct: 448 --GIWTLKERYEDPVHKYIVISYINKTLVLKIGEKVEQVHDT-GLEGTKQTIHVGTLIDD 504
Query: 581 LLVQIHQNAVR 591
+QI N R
Sbjct: 505 SQIQILTNGYR 515
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 13/151 (8%)
Query: 33 LAKCVLKGSVVLQVA-HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIK 91
L L+ S +Q A +G+ P + ++V K IEL+ I E +++ Q VFG I+
Sbjct: 3 LYSLTLQKSTGIQKAIYGNFSGPKAQEIVVSKVKHIELLKINES---KTIASQEVFGIIR 59
Query: 92 DLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSR 151
+ +F N +D LV+ SDSG++ L F + F V Q G R
Sbjct: 60 SIHSF----RFPGNN-----RDNLVIGSDSGRVVVLGFDGLKNMFVKVHQETYGKTGCRR 110
Query: 152 HQLGRMLAVDSSGCLIAVSAYEDRLGLFSLS 182
G+ LA D G +SA E ++ L+
Sbjct: 111 IVPGQYLACDPKGRAFMISAVEKHKFVYILT 141
>gi|58258783|ref|XP_566804.1| U2 snRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819361|sp|P0CR23.1|RSE1_CRYNB RecName: Full=Pre-mRNA-splicing factor RSE1
gi|338819362|sp|P0CR22.1|RSE1_CRYNJ RecName: Full=Pre-mRNA-splicing factor RSE1
gi|57222941|gb|AAW40985.1| U2 snRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1217
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/455 (20%), Positives = 169/455 (37%), Gaps = 99/455 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRD--QMFACCGVAPEGSLRIIRSGISLEKLLRTAP 516
L+ + ++ PI D VV+ D Q++A CG + R ++ G+ + +++ ++P
Sbjct: 412 LLLVDTVPSLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVAEMV-SSP 470
Query: 517 IYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
+ T WT+++ D Y S++VLSF T VL +G +V D+ GF TLA
Sbjct: 471 LPGVPTNVWTLKLTEDDEYDSYIVLSFPNGTLVLSIGETIEEVNDT-GFLSSGPTLAVQQ 529
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVST 635
+ + L+Q+H +R + W P +I ++++
Sbjct: 530 LGNAGLLQVHPYGLRHIR------------AADRVDEWPAPPGQTIVAATTNRRQVVIAL 577
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
S ++ S+S Y+ + L +C++I + RR++S
Sbjct: 578 STAELVYFELDPEGSLSEYQ----EKKALPGNATCVTIAEVPEGRRRTS----------- 622
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISG 748
+G +V ++S P L L+ SI L T+I
Sbjct: 623 -----------FLAVGCDNQTVSIISLEPDSTLDTLSLQALTAPPTSICLAEIFDTSIDK 671
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
++ GL NG+LLR + V P+ +S T
Sbjct: 672 N---------RATMFLNIGLMNGVLLR----------TVVDPVDGSLSDT---------- 702
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
R +G P LV + ++A S R WLL T + L
Sbjct: 703 --------------------RLRFLGAKPPKLVRANVQGQPSVMAFSSRTWLLYTYQDML 742
Query: 869 AYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ + +A + + CP G++ ++ N+L +
Sbjct: 743 QTQPLIYDTLEYAWSLSAAMCPDGLIGISGNTLRI 777
>gi|258570355|ref|XP_002543981.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
gi|237904251|gb|EEP78652.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
Length = 1209
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 35/260 (13%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++ V + ++ Q++ CG + R ++ G+ + +++ +
Sbjct: 409 ENLNLVES--INSVNPLMSCKVANLTEDDAPQLYTLCGTGARSTFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D Y ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRNDQYDAYIILSFTNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI A + V+
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADRRVNEWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS---------- 684
S+ ++ S++ Y+ + + ++C+S+ + P R +SS
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD----EKREMSGTVTCLSLGEILPGRVRSSFLAVGCDDST 629
Query: 685 ------SPISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 630 VRILSLDPDSTLENKSVQAL 649
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G ++++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKIRALYSQDVFGIIRSLAA------FRLAGSN---KDYIIIGSDSGRITIVEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGIRRVVPGQYLAVDPKGRACLIA 139
>gi|195996153|ref|XP_002107945.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
gi|190588721|gb|EDV28743.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
Length = 1134
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 22/226 (9%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI+DM VD + + Q+ C G SLR++R+GI + +L I G W
Sbjct: 354 NLGPIIDMVSVDLDKQGQSQLVTCSGFGKNASLRVLRNGIGIHELANID--LDHICGIWR 411
Query: 527 VRM--KVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
+R + Y LVLSF +R L+ + TD GF T VA +VQ
Sbjct: 412 LRTVSRSISEYDDVLVLSFAGHSRFLKFDGREVEETDISGFDDYKETDFAANVAFDQIVQ 471
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEH-VSISLGAVAHNMIIVSTSNPCFLFI 643
I +VRL A G L W P + +IS + I+V++ C LF
Sbjct: 472 ISNESVRL------AGCDGRGL----LQEWKPPNGKTISKSTAGNTQIMVASG--CELFY 519
Query: 644 LGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISL 689
L + E+ ++ ++ L+ +++CI I K R + L
Sbjct: 520 -----LEIGEGELKQVSNISLEHDIACIDISLKDDNERAQICAVGL 560
>gi|19115326|ref|NP_594414.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|73919127|sp|Q9UTT2.1|RSE1_SCHPO RecName: Full=Pre-mRNA-splicing factor prp12; AltName:
Full=Pre-mRNA-processing protein 12; AltName:
Full=Spliceosome-associated protein 130
gi|6451681|dbj|BAA86918.1| Prp12p/SAP130 [Schizosaccharomyces pombe]
gi|7981404|emb|CAB92100.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
pombe]
Length = 1206
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 168/426 (39%), Gaps = 96/426 (22%)
Query: 485 DQMFACCGVAPEGSLRIIRSGISLEKLLRT----APIYQGITGTWTVRMKVSDPYHSFLV 540
+Q++ CG SLR +R G+ +++ + API WT+++ +D Y S+++
Sbjct: 446 NQLYTVCGRGSNSSLRQLRRGLETTEIVASELPGAPI-----AIWTLKLNQTDVYDSYII 500
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
LSF T VL +G +++DS GF V TL + LVQIH +R
Sbjct: 501 LSFTNGTLVLSIGETVEEISDS-GFLSSVSTLNARQMGRDSLVQIHPKGIRYIRAN---- 555
Query: 601 SGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEM 659
+ W P+ V + A+ I+V+ SN ++ S V ++ E
Sbjct: 556 --------KQTSEWKLPQDVYVVQSAINDMQIVVALSNGELVYF--EMSDDVEGGQLNEY 605
Query: 660 QHMR-LQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVE 718
Q + L + ++ +++ R+S+ +++V L +
Sbjct: 606 QERKTLTANVTSLALGPVQEGSRRSNFMCLACDDATVRVLSLDL---------------- 649
Query: 719 VLSFVPKEGLRVLASGSIVLTNTMGTAISGC-IPQDVRLVLADQFYVLAGLRNGMLLRFE 777
+ E L V A S A S C IP +V V Y+ GL NG+ LR
Sbjct: 650 ---YTTLENLSVQALSS--------PANSLCIIPMNVNGV--STLYLHIGLMNGVYLR-- 694
Query: 778 WPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITP 837
+ I T S L + + R + I P
Sbjct: 695 ---------------TVIDVT------------------SGQLLDTRTRFLGPRAVKIYP 721
Query: 838 VFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVA 897
+ + + ++A+S R +L + + +L + I++ HA+ S +CP+GI+ +
Sbjct: 722 ITMKNQN-----TVLAVSSRTFLAYSYQQNLQLSPIAYSAIDHASSFASEQCPEGIVAIQ 776
Query: 898 ENSLNL 903
+N+L +
Sbjct: 777 KNTLKI 782
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 51 LRSPTSNDVVFGKETSIELVII-GEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQV 109
L + ++V E+ + + + DG + + Q FG I+++A +
Sbjct: 28 LSGKKAQEIVIATESRLLIYKVDATDGRMNCILNQNCFGIIRNVAPLRLTG--------- 78
Query: 110 MGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAV 169
+D LVV SDSG+++ L + E ++ P+ Q G R G LA+D+ G +
Sbjct: 79 FKRDYLVVTSDSGRITILEYNVEKNKLVPIYQETFGKSGIRRVVPGEYLAIDAKGRAAMI 138
Query: 170 SAYEDRLGLFSLSMSSGSDI 189
++ E ++ L+ S +++
Sbjct: 139 ASVEKNKLVYVLNRDSEANL 158
>gi|242772631|ref|XP_002478075.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
10500]
gi|218721694|gb|EED21112.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
10500]
Length = 1209
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 174/463 (37%), Gaps = 103/463 (22%)
Query: 451 VLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEK 510
V EN LV + + ++ PI+D + D E Q++ CG + R ++ G+ + +
Sbjct: 405 VRDAENLNLVES--VNSLNPIMDCKITDLLAEDAPQIYTICGTGARSTFRTLKHGLDVSE 462
Query: 511 LLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVC 570
++ + + + WT ++ D + +++VLSF T VL +G +VTD+ GF
Sbjct: 463 IVESE-LPSVPSAVWTTKLTRKDEFDAYIVLSFTNGTLVLSIGETVEEVTDT-GFLSTAP 520
Query: 571 TLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNM 630
TLA + + L+Q+H +R + + +P P+H +I A
Sbjct: 521 TLAVQQLGEDSLIQVHPKGIRHILADHRVN------EWPA-----PQHRTIVAAATNERQ 569
Query: 631 IIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLV 690
+ V+ S+ ++ S++ Y+ E+R+ S ++ +
Sbjct: 570 VAVALSSGEIVYFEMDTDGSLAEYD-----------------------EKRQMSGTVTSL 606
Query: 691 SNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGL-----RVLASGSIVLT-NTMGT 744
S V P G + +G +V +LS P L + L S L +M
Sbjct: 607 SLGEV---PEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSMAD 663
Query: 745 AISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTEN 804
+ SG Y+ GL +G+ LR
Sbjct: 664 STSG----------GSTLYLHIGLYSGVYLR----------------------------- 684
Query: 805 IRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL---- 860
DE+ L TR +G PV L +S + ++ALS RPWL
Sbjct: 685 -----------TVLDEVTGELSDTRTRFLGAKPVKLFGVSVKGQSAVLALSSRPWLGYSD 733
Query: 861 LQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+QT S T + + S +C +G++ + +L +
Sbjct: 734 IQT--KSFMLTPLDYVGLEWGWNFSSEQCLEGMVGIQGQNLRI 774
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G V + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVTPIYTQDVFGIIRSLAA------FRLAGSN---KDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVIPGQYLAVDPKGRACLIA 139
>gi|212531303|ref|XP_002145808.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
18224]
gi|210071172|gb|EEA25261.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
18224]
Length = 1209
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 174/459 (37%), Gaps = 103/459 (22%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ PI+D + D E Q++ CG + R ++ G+ + +++ +
Sbjct: 409 ENLNLVES--INSLNPIMDCKITDAIGEDAPQIYTICGTGARSTFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D + +++VLSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRNDEFDAYIVLSFTNGTLVLSIGETVEEVTDT-GFLSTAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R + + +P P+H +I A + V+
Sbjct: 525 QQLGEDSLIQVHPKGIRHILADHRVN------EWPA-----PQHRTIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
S+ ++ S++ Y+ E+R+ S ++ +S
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD-----------------------EKRQMSGTVTSLSLGE 610
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGL-----RVLASGSIVLT-NTMGTAISG 748
V P G + +G +V +LS P L + L S L +M + SG
Sbjct: 611 V---PEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSMIDSTSG 667
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
Y+ GL +G+ LR
Sbjct: 668 ----------GSTLYLHIGLYSGVYLR--------------------------------- 684
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL----LQTA 864
DE+ L TR +G PV L +S ++ALS RPWL +QT
Sbjct: 685 -------TVLDEVTGELSDTRTRFLGAKPVKLFGVSVKGQPAVLALSSRPWLGYSDVQT- 736
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
S TS+ + S +C +G++ + +L +
Sbjct: 737 -KSFMLTSLDYVGLEWGWNFSSEQCLEGMVGIQGQNLRI 774
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G V + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVTPIYTQDVFGIIRSLAA------FRLAGSS---KDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVIPGQYLAVDPKGRACLIA 139
>gi|440473070|gb|ELQ41892.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae Y34]
Length = 1229
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 133/325 (40%), Gaps = 55/325 (16%)
Query: 461 YTSPIQNIA---------PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL 511
Y P +N+A P++D+ V + +E Q++ G + R+++ G+ + ++
Sbjct: 407 YPRPTENLALVESIDSMNPLMDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNEI 466
Query: 512 LRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCT 571
+ + + + WT +++ D Y +++VLSF T VL +G +V+D+ GF V T
Sbjct: 467 V-ASQLPGTPSAVWTTKLRRDDEYDAYIVLSFTNGTLVLSIGETVEEVSDT-GFLSSVPT 524
Query: 572 LACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNM 630
LA + D LVQ+H +R + V W P+H SI A
Sbjct: 525 LAVQQLGDDGLVQVHPKGIR-------------HIRNGVVNEWSSPQHRSIVAAATNERQ 571
Query: 631 IIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLV 690
+ V+ S+ ++ S++ Y+ E + M V
Sbjct: 572 VAVALSSGEIVYFEMDTDGSLAEYD--EKKEM------------------------FGTV 605
Query: 691 SNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCI 750
++ S+ +P G + +G +V +LS P+ L S S+ +A+S
Sbjct: 606 TSLSLGEVPEGRLRSSYLAVGCDDCTVRILSLDPES---TLESKSVQALTAAPSALSIMS 662
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLR 775
+D Y+ GL +G+ LR
Sbjct: 663 MEDSS-SGGTTLYLHIGLNSGVYLR 686
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G V + VFG I+DLA F S KD L++ SDSG+++ + + +R
Sbjct: 54 GKVVPLMSHDVFGIIRDLA------SFRLAGSS---KDYLIIASDSGRITIVEYLPAQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F +++HL G S R G+ LA D G CLIA
Sbjct: 105 F---SRIHLETFGKSGVRRVVPGQYLAADPKGRACLIA 139
>gi|440478305|gb|ELQ59147.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae P131]
Length = 1223
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 133/325 (40%), Gaps = 55/325 (16%)
Query: 461 YTSPIQNIA---------PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL 511
Y P +N+A P++D+ V + +E Q++ G + R+++ G+ + ++
Sbjct: 407 YPRPTENLALVESIDSMNPLMDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNEI 466
Query: 512 LRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCT 571
+ + + + WT +++ D Y +++VLSF T VL +G +V+D+ GF V T
Sbjct: 467 V-ASQLPGTPSAVWTTKLRRDDEYDAYIVLSFTNGTLVLSIGETVEEVSDT-GFLSSVPT 524
Query: 572 LACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNM 630
LA + D LVQ+H +R + V W P+H SI A
Sbjct: 525 LAVQQLGDDGLVQVHPKGIR-------------HIRNGVVNEWSSPQHRSIVAAATNERQ 571
Query: 631 IIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLV 690
+ V+ S+ ++ S++ Y+ E + M V
Sbjct: 572 VAVALSSGEIVYFEMDTDGSLAEYD--EKKEM------------------------FGTV 605
Query: 691 SNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCI 750
++ S+ +P G + +G +V +LS P+ L S S+ +A+S
Sbjct: 606 TSLSLGEVPEGRLRSSYLAVGCDDCTVRILSLDPES---TLESKSVQALTAAPSALSIMS 662
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLR 775
+D Y+ GL +G+ LR
Sbjct: 663 MEDSS-SGGTTLYLHIGLNSGVYLR 686
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G V + VFG I+DLA F S KD L++ SDSG+++ + + +R
Sbjct: 54 GKVVPLMSHDVFGIIRDLA------SFRLAGSS---KDYLIIASDSGRITIVEYLPAQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F +++HL G S R G+ LA D G CLIA
Sbjct: 105 F---SRIHLETFGKSGVRRVVPGQYLAADPKGRACLIA 139
>gi|302503607|ref|XP_003013763.1| hypothetical protein ARB_07875 [Arthroderma benhamiae CBS 112371]
gi|291177329|gb|EFE33123.1| hypothetical protein ARB_07875 [Arthroderma benhamiae CBS 112371]
Length = 1148
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 15/179 (8%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFL 440
+WE + + + D G F + + +D + V + + G +A L++++G +
Sbjct: 295 AWEQVDGQ--RWLLADDYGRLFFLMLVLDAD-NAVDTWKVDFLGVTSRASVLVYLDGGIV 351
Query: 441 SAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEK---------RDQMFACC 491
GD V++ + G I NIAPILD +V+D D + ++
Sbjct: 352 FVGSHQGDSQVIQIKEGGFDLVQTISNIAPILDFTVMDMGDRSGATREFSSGQTRIVTGS 411
Query: 492 GVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
G +GSLR +RSG+ +E+L A + + IT WT+R +P+ L++SFV ETRV
Sbjct: 412 GAFGDGSLRSVRSGVGIEELGVLASM-EHITDLWTLRSACPEPFFDTLLVSFVNETRVF 469
>gi|346327528|gb|EGX97124.1| pre-mRNA splicing factor RSE1 [Cordyceps militaris CM01]
Length = 1206
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 50/323 (15%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + P N P+LD V + E Q+F CG + R ++ G+ + +++
Sbjct: 406 ENLALVDSIPAMN--PLLDCKVANLTGEDAPQIFTICGNGARSTFRTLKHGLEVNEIV-- 461
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
A G+ + WT+++ + Y +++VLSF T VL +G +V+DS GF V T+A
Sbjct: 462 ASELPGVPSAVWTLKLNSDEQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTSVPTIA 520
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMII 632
L+ L+Q+H +R +G + W P+H SI + + +
Sbjct: 521 AQLLGTDGLIQVHPRGIRHI------RNGNV-------NEWSAPQHRSIVAASTNSHQVA 567
Query: 633 VSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSN 692
++ S+ ++ S++ Y+ E + M V+
Sbjct: 568 IALSSGEIVYFEMDSDGSLAEYD--EKKEM------------------------FGTVTA 601
Query: 693 SSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQ 752
S+ +P G + +G +V +LS P+ L + S+ T+++ IP
Sbjct: 602 LSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPES---TLENKSVQALTAAPTSLA-IIPM 657
Query: 753 DVRLVLADQFYVLAGLRNGMLLR 775
D Y+ GL +G+ LR
Sbjct: 658 DDSSSGGSTLYLHIGLHSGVYLR 680
>gi|70992737|ref|XP_751217.1| nuclear mRNA splicing factor [Aspergillus fumigatus Af293]
gi|74670386|sp|Q4WLI5.1|RSE1_ASPFU RecName: Full=Pre-mRNA-splicing factor rse1
gi|66848850|gb|EAL89179.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus
Af293]
Length = 1225
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 155/411 (37%), Gaps = 95/411 (23%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV T + ++ P++D +V+ +++ Q++ G S R ++ G+ + +++ +
Sbjct: 409 ENLNLVET--LNSLNPLIDSKIVNLNEDDAPQIYTVSGSGARSSFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D + ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRADEFDAYIILSFANGTLVLSIGETVEEVTDT-GFLSTAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R + + +P P+H SI A + V+
Sbjct: 525 QQLGEDSLIQVHPRGIRHILADRRVN------EWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
S+ ++ E+ ++ ERR+ S ++ +S
Sbjct: 574 LSSGEIVYF-----------------------EMDADGTLAEYDERRQMSGTVTCLSLGE 610
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGL-----RVLASGSIVLTNTMGTAISGC 749
V P G + +G +V +LS P L + L S L N M A S
Sbjct: 611 V---PEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSAL-NIMSMADSSS 666
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
Y+ GL +G+ LR
Sbjct: 667 --------GGTTLYLHIGLYSGVYLR---------------------------------- 684
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL 860
DE+ L TR +G PV L +S ++ALS RPWL
Sbjct: 685 ------TVLDEVTGELSDTRTRFLGAKPVKLFRVSVKGQTAVLALSSRPWL 729
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G + + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKITPIYSQDVFGIIRTLAA------FRLAGSS---KDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVVPGQYLAVDPKGRACLIA 139
>gi|70952260|ref|XP_745310.1| splicing factor 3b, subunit 3, 130kD [Plasmodium chabaudi chabaudi]
gi|56525593|emb|CAH80831.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium chabaudi
chabaudi]
Length = 530
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 458 RLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LR 513
L I +++PI+DM ++D + Q++A CG P SLRI++ G+S+E+L L
Sbjct: 404 NLYLVDQIYSLSPIIDMKILDAKNSSLPQIYALCGRGPRSSLRILQHGLSIEELANNELP 463
Query: 514 TAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
P Y WT++ S Y ++++SF T +L +G +V DS+ +V T+
Sbjct: 464 GKPKY-----IWTIKKDNSSEYDGYIIVSFEGNTLILEIGETVEEVYDSL-LLTNVTTIH 517
Query: 574 CGLVADGLLVQIH 586
L+ D +Q++
Sbjct: 518 INLLYDNSFIQVY 530
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPW 98
K + + + +G+ P +++++ K +EL+ + G + + + +FG I+ L +
Sbjct: 11 KPTAITRTVYGNFSGPKAHEIIVAKGQVLELLRADKQGKLSVIVSKDIFGIIRSLEIF-- 68
Query: 99 NKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRML 158
+ N KD + + SDSG+L L + +E + F V G R G +
Sbjct: 69 --RLTGSN-----KDYIAIGSDSGRLVILKYDDEKNDFIRVHCETYGKSGIRRIVPGEYI 121
Query: 159 AVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
AVD G + + A E + ++ L+ + ++
Sbjct: 122 AVDPKGRALMLCAIEKQKFVYILNRDNKENL 152
>gi|389638952|ref|XP_003717109.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
gi|148887431|sp|Q52E49.2|RSE1_MAGO7 RecName: Full=Pre-mRNA-splicing factor RSE1
gi|351642928|gb|EHA50790.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
Length = 1216
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 133/325 (40%), Gaps = 55/325 (16%)
Query: 461 YTSPIQNIA---------PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL 511
Y P +N+A P++D+ V + +E Q++ G + R+++ G+ + ++
Sbjct: 407 YPRPTENLALVESIDSMNPLMDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNEI 466
Query: 512 LRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCT 571
+ + + + WT +++ D Y +++VLSF T VL +G +V+D+ GF V T
Sbjct: 467 V-ASQLPGTPSAVWTTKLRRDDEYDAYIVLSFTNGTLVLSIGETVEEVSDT-GFLSSVPT 524
Query: 572 LACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNM 630
LA + D LVQ+H +R + V W P+H SI A
Sbjct: 525 LAVQQLGDDGLVQVHPKGIR-------------HIRNGVVNEWSSPQHRSIVAAATNERQ 571
Query: 631 IIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLV 690
+ V+ S+ ++ S++ Y+ E + M V
Sbjct: 572 VAVALSSGEIVYFEMDTDGSLAEYD--EKKEM------------------------FGTV 605
Query: 691 SNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCI 750
++ S+ +P G + +G +V +LS P+ L S S+ +A+S
Sbjct: 606 TSLSLGEVPEGRLRSSYLAVGCDDCTVRILSLDPES---TLESKSVQALTAAPSALSIMS 662
Query: 751 PQDVRLVLADQFYVLAGLRNGMLLR 775
+D Y+ GL +G+ LR
Sbjct: 663 MEDSS-SGGTTLYLHIGLNSGVYLR 686
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G V + VFG I+DLA F S KD L++ SDSG+++ + + +R
Sbjct: 54 GKVVPLMSHDVFGIIRDLA------SFRLAGSS---KDYLIIASDSGRITIVEYLPAQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F +++HL G S R G+ LA D G CLIA
Sbjct: 105 F---SRIHLETFGKSGVRRVVPGQYLAADPKGRACLIA 139
>gi|156051126|ref|XP_001591524.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980]
gi|154704748|gb|EDO04487.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1147
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 39/262 (14%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++D V + DE Q+++ CG + R ++ G+ + +++ +
Sbjct: 412 ENLSLVES--IDSMNPLMDCKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVES 469
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
G+ + WT ++ +D Y ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 470 E--LPGVPSAVWTTKLTRNDVYDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLA 526
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIV 633
+ + L+Q+H +R I V P+H SI + V
Sbjct: 527 VQQLGEDSLIQVHPKGIR-----------HIRADRRVNEWAAPQHRSIVAATTNERQVAV 575
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS-------- 685
+ S+ ++ S++ Y+ + + ++C+S+ + PE R+ S
Sbjct: 576 ALSSGEIVYFEMDSDGSLAEYD----EKKEMSGTVTCLSLGEV-PEGRQRSQFLAVGCDD 630
Query: 686 ---------PISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 631 STVRILSLDPDSTLENKSVQAL 652
>gi|159130328|gb|EDP55441.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus
A1163]
Length = 1225
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 155/411 (37%), Gaps = 95/411 (23%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV T + ++ P++D +V+ +++ Q++ G S R ++ G+ + +++ +
Sbjct: 409 ENLNLVET--LNSLNPLIDSKIVNLNEDDAPQIYTVSGSGARSSFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D + ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRADEFDAYIILSFANGTLVLSIGETVEEVTDT-GFLSTAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R + + +P P+H SI A + V+
Sbjct: 525 QQLGEDSLIQVHPRGIRHILADRRVN------EWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
S+ ++ E+ ++ ERR+ S ++ +S
Sbjct: 574 LSSGEIVYF-----------------------EMDADGTLAEYDERRQMSGTVTCLSLGE 610
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGL-----RVLASGSIVLTNTMGTAISGC 749
V P G + +G +V +LS P L + L S L N M A S
Sbjct: 611 V---PEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSAL-NIMSMADSSS 666
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
Y+ GL +G+ LR
Sbjct: 667 --------GGTTLYLHIGLYSGVYLR---------------------------------- 684
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL 860
DE+ L TR +G PV L +S ++ALS RPWL
Sbjct: 685 ------TVLDEVTGELSDTRTRFLGAKPVKLFRVSVKGQTAVLALSSRPWL 729
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G + + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKITPIYSQDVFGIIRTLAA------FRLAGSS---KDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVVPGQYLAVDPKGRACLIA 139
>gi|358338734|dbj|GAA31211.2| DNA damage-binding protein 1, partial [Clonorchis sinensis]
Length = 1515
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 159/374 (42%), Gaps = 66/374 (17%)
Query: 446 MGDGMVLK-------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGS 498
+GD +++ E N + NI PI+DM +++ + ++Q+ C G EG+
Sbjct: 332 LGDSQLIRLNPDPDPERNSYITVLENYTNIGPIVDMVLLE--SKGQNQLITCSGAYKEGT 389
Query: 499 LRIIRSGISLEKLLRTAPIYQG-ITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFT 557
LRIIR+GI + + A I Q I G W ++ SD Y +V+S V +T++LR+ +
Sbjct: 390 LRIIRNGIGIHE---HATIDQDLIKGAWCFPLE-SDRYDDSIVVSMVGQTQLLRLTDDDI 445
Query: 558 DVTDSVGFRPDVCTLACGLVA---------------------DGLLVQIHQNAVRLCMPT 596
GF+ D T+ C ++ LL+Q + +RL
Sbjct: 446 TALHLEGFKTDEQTVYCATLSPMDACTSDNPESSSRSYSVFQHSLLMQATTSGIRLIGIH 505
Query: 597 MVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYE 655
+ SG + W P IS + +H +IV S P + V + +E
Sbjct: 506 HLNGSGCL-------AEWRSPSGRGISCLS-SHGALIVVASGPELYVLRVVGPANQPSFE 557
Query: 656 IYEMQHMRLQSELSCISI-PQKHPERRKSSSPISLVS---NSSVPALPA-GVIIGYTFVI 710
+ H + +E++CI + P H ++S S + + +VP L A G+ +GY +
Sbjct: 558 --QTAHRTMSNEVACIDLTPFDHKRAAYAASQTSTIDEPVDYTVPQLVAVGLWLGYGLAL 615
Query: 711 GTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLV-LADQFYVLAGLR 769
P++E++ P L T + + +P+ V L L D Y+ A +
Sbjct: 616 -LRLPNLELVHEEP-------------LPETTASTGTALLPRSVLLAQLEDMAYLFAAMG 661
Query: 770 NGMLLRFEWPPDSN 783
+G L + P ++
Sbjct: 662 DGTLYFYTVCPSAD 675
>gi|357528934|sp|Q5B1X8.2|RSE1_EMENI RecName: Full=Pre-mRNA-splicing factor rse1
gi|259485100|tpe|CBF81885.1| TPA: Pre-mRNA-splicing factor rse1
[Source:UniProtKB/Swiss-Prot;Acc:Q5B1X8] [Aspergillus
nidulans FGSC A4]
Length = 1209
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 155/412 (37%), Gaps = 97/412 (23%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV I ++ P++D VV+ ++ Q+F G + R ++ G+ + +++ +
Sbjct: 409 ENLNLV--EAINSLNPLVDSKVVNISEDDAPQIFTVSGTGARSTFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D + +++VLSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRADEFDAYIVLSFANGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+QIH +R + + +P P+H SI A + V+
Sbjct: 525 QQLGEDSLIQIHPRGIRHILADRRVN------EWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
S+ ++ EL ++ ERR+ S ++ +S
Sbjct: 574 LSSGEIVYF-----------------------ELDADGSLAEYDERRQMSGTVTCLSLGE 610
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLR------VLASGSIVLTNTMGTAISG 748
V P G + +G +V +LS P L + A+ S + M + SG
Sbjct: 611 V---PEGRVRSSFLAVGCDDSTVRILSLDPDTTLENKSVQALTAAPSALNIIAMADSSSG 667
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
Y+ GL +G+ LR
Sbjct: 668 ----------GTTLYLHIGLHSGVYLR--------------------------------- 684
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL 860
+ DE+ L TR +G V L +S + ++ALS RPWL
Sbjct: 685 -------TALDEVTGELSDTRTRFLGSKAVKLFQVSVTGQTAVLALSSRPWL 729
>gi|171685748|ref|XP_001907815.1| hypothetical protein [Podospora anserina S mat+]
gi|170942835|emb|CAP68488.1| unnamed protein product [Podospora anserina S mat+]
Length = 1235
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L I ++ P +D V + E Q+++ CG S R+++ G+ + +++ +
Sbjct: 417 LTLVESIDSMNPQIDCKVANLTGEDAPQIYSVCGNGARSSFRMLKHGLEVSEIVASE--- 473
Query: 519 QGITGT----WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ GT WT ++ D Y +++VLSF T VL +G +V+DS GF V TLA
Sbjct: 474 --LPGTPAAVWTTKLTKYDEYDAYIVLSFTNATLVLSIGETVEEVSDS-GFLTTVPTLAV 530
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R + V +P P+H SI A N ++++
Sbjct: 531 QQLGEEGLIQVHPKGIRHIVQGRVNE-------WPA-----PQHRSIVAAATNENQVVIA 578
Query: 635 TSNPCFLFILGVRSLSVSHYE 655
S+ ++ S++ Y+
Sbjct: 579 LSSGEIVYFEMDADGSLAEYD 599
>gi|405117821|gb|AFR92596.1| pre-mRNA-splicing factor RSE1 [Cryptococcus neoformans var. grubii
H99]
Length = 1217
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 170/455 (37%), Gaps = 99/455 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRD--QMFACCGVAPEGSLRIIRSGISLEKLLRTAP 516
L+ + ++ PI D VV+ D Q++A CG + R ++ G+ + +++ ++P
Sbjct: 412 LLLVDTVPSLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVAEMV-SSP 470
Query: 517 IYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
+ T WT+++ D Y S++VLSF T VL +G +V D+ GF TLA
Sbjct: 471 LPGVPTNVWTLKLTEDDEYDSYIVLSFPNGTLVLSIGETIEEVNDT-GFLSSGPTLAVQQ 529
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVST 635
+ + L+Q+H +R + W P +I ++++
Sbjct: 530 LGNAGLLQVHPYGLRHIR------------AADRVDEWPAPPGQTIVAATTNQRQVVIAL 577
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
S ++ S+S Y+ + L +C++I + RR++
Sbjct: 578 STAELVYFELDPEGSLSEYQ----EKKALPGNATCVTIAEVPEGRRRT------------ 621
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISG 748
P L +G +V ++S P L L+ SI L T+I
Sbjct: 622 PFL----------AVGCDNQTVSIISLEPDSTLDTLSLQALTAPPTSICLAEIFDTSIDK 671
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
++ GL NG+LLR + V P+ +S T
Sbjct: 672 N---------RATMFLNIGLMNGVLLR----------TVVDPVDGSLSDT---------- 702
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
R +G P LV + ++A S R WLL T + L
Sbjct: 703 --------------------RLRFLGAKPPKLVRANVQGQPSVMAFSSRTWLLYTYQDML 742
Query: 869 AYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ + +A + + CP G++ ++ N+L +
Sbjct: 743 QTQPLIYDTLEYAWSLSAAMCPDGLIGISGNTLRI 777
>gi|67538564|ref|XP_663056.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
gi|40743422|gb|EAA62612.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
Length = 1226
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 155/412 (37%), Gaps = 97/412 (23%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV I ++ P++D VV+ ++ Q+F G + R ++ G+ + +++ +
Sbjct: 409 ENLNLV--EAINSLNPLVDSKVVNISEDDAPQIFTVSGTGARSTFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D + +++VLSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRADEFDAYIVLSFANGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+QIH +R + + +P P+H SI A + V+
Sbjct: 525 QQLGEDSLIQIHPRGIRHILADRRVN------EWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
S+ ++ EL ++ ERR+ S ++ +S
Sbjct: 574 LSSGEIVYF-----------------------ELDADGSLAEYDERRQMSGTVTCLSLGE 610
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLR------VLASGSIVLTNTMGTAISG 748
V P G + +G +V +LS P L + A+ S + M + SG
Sbjct: 611 V---PEGRVRSSFLAVGCDDSTVRILSLDPDTTLENKSVQALTAAPSALNIIAMADSSSG 667
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
Y+ GL +G+ LR
Sbjct: 668 ----------GTTLYLHIGLHSGVYLR--------------------------------- 684
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL 860
+ DE+ L TR +G V L +S + ++ALS RPWL
Sbjct: 685 -------TALDEVTGELSDTRTRFLGSKAVKLFQVSVTGQTAVLALSSRPWL 729
>gi|154277742|ref|XP_001539706.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
gi|150413291|gb|EDN08674.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
Length = 1233
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 105/505 (20%), Positives = 186/505 (36%), Gaps = 120/505 (23%)
Query: 407 EIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQ 466
EI F SD + LSE L PP + R EN LV + I
Sbjct: 382 EIEFTSDAYSADLSEPL---PPA----YFRPR--------------PYENVNLVES--ID 418
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
++ P++D + + D+ Q++ CG S R ++ G+ + +++ + + + WT
Sbjct: 419 SLNPLMDCKIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESE-LPSVPSAVWT 477
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
++ D + ++++LSF T VL +G +VTD+ GF TLA + + L+Q+H
Sbjct: 478 TKLTREDEFDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAVQQLGEDSLIQVH 536
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGV 646
+R H+ +P P+H SI + ++ S+ ++
Sbjct: 537 PKGIRHI------HADRRVNEWPA-----PQHRSIVAATTNERQVAIALSSGEIVYFEMD 585
Query: 647 RSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGY 706
S++ Y+ E+R S ++ +S V P G
Sbjct: 586 TDGSLAEYD-----------------------EKRAMSGTVTCLSLGEV---PRGRARSS 619
Query: 707 TFVIGTHRPSVEVLSFVPKEGL-----RVLASGSIVLT-NTMGTAISGCIPQDVRLVLAD 760
+G +V +LS P+ L + L S L+ M + SG
Sbjct: 620 FLAVGCDDSTVRILSLDPESTLENKSVQALTSAPSALSIMAMSDSTSG----------GS 669
Query: 761 QFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDE 820
Y+ GL +G+ LR DE
Sbjct: 670 TLYLHIGLYSGIYLR----------------------------------------TVLDE 689
Query: 821 LPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY--TSISFQPS 878
+ L TR +G+ PV L +S ++ALS RPWL + + A+ T + +
Sbjct: 690 VTGELSDTRTRFLGLKPVKLFQVSVKEQTVVLALSSRPWLGYSHLQTKAFMLTPLDYVSL 749
Query: 879 THATPVCSVECPKGILFVAENSLNL 903
S +C +G++ + +L +
Sbjct: 750 EWGWNFSSEQCVEGMVGIQGQNLRI 774
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G ++++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKIRTLFSQDVFGIIRALAA------FRLAGS---SKDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGIRRVIPGQYLAVDPKGRACLIA 139
>gi|321249291|ref|XP_003191408.1| U2 snRNA binding protein [Cryptococcus gattii WM276]
gi|317457875|gb|ADV19621.1| U2 snRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 1217
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 170/455 (37%), Gaps = 99/455 (21%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRD--QMFACCGVAPEGSLRIIRSGISLEKLLRTAP 516
L+ + ++ PI D VV+ D Q++A CG + R ++ G+ + +++ ++P
Sbjct: 412 LLLVDSVPSLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVTEMV-SSP 470
Query: 517 IYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
+ T WT+++ D Y S++VLSF T VL +G +V D+ GF TLA
Sbjct: 471 LPGVPTNVWTLKLTEDDEYDSYIVLSFPNGTLVLSIGETIEEVNDT-GFLSSGPTLAVQQ 529
Query: 577 VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVST 635
+ + L+Q+H +R + W P +I ++++
Sbjct: 530 LGNAGLLQVHPYGLRHIR------------AADRVDEWPAPPGQTIVAATTNQRQVVIAL 577
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
S ++ S+S Y+ + L +C++I + RR++
Sbjct: 578 STAELVYFELDPEGSLSEYQ----EKKALPGNATCVTIAEVPEGRRRT------------ 621
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAISG 748
P L +G +V ++S P L L+ SI L T+I
Sbjct: 622 PFL----------AVGCDNQTVSIISLEPDSTLDTLSLQALTAPPTSICLAEIFDTSIDK 671
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
++ GL NG+LLR + V P+ +S T
Sbjct: 672 N---------RATMFLNIGLMNGVLLR----------TVVDPVDGSLSDT---------- 702
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
R +G P LV + ++A S R WLL T + L
Sbjct: 703 --------------------RLRFLGAKPPKLVRANVQGQPSVMAFSSRTWLLYTYQDML 742
Query: 869 AYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ + +A + + CP G++ ++ N+L +
Sbjct: 743 QTQPLIYDTLEYAWSLSAAMCPDGLIGISGNTLRI 777
>gi|195108657|ref|XP_001998909.1| GI23368 [Drosophila mojavensis]
gi|193915503|gb|EDW14370.1| GI23368 [Drosophila mojavensis]
Length = 1140
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 26/263 (9%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMV--LKEENGRLVYTSPIQN---IAPILDMSVVDYHD 481
P C + +++ FL GD + L E Y P++N +APILD++VVD
Sbjct: 310 PEC--ITYLDNGFLYIGSRHGDSQLVRLSSEPIDGSYVIPVENFTNLAPILDIAVVDLDR 367
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDP-YHSFLV 540
+ + Q+ C G +GSLRIIR GI +++ GI G W++++ + D Y + LV
Sbjct: 368 QGQGQIITCSGSFKDGSLRIIRIGIGIQE--HACIDLPGIKGMWSLKVGIDDSVYENTLV 425
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
L+FV TR+L + + T+ GF D+ + C V L+Q+ +VRL + A
Sbjct: 426 LAFVGHTRILTLSGEEVEETEIPGFASDLQSFLCANVEYDQLIQVTAESVRLVKSSTKAL 485
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQ 660
G W PE S+G V+ N + ++ +F + + S + E
Sbjct: 486 VG----------EWKPEG-DRSIGVVSCNSTQIVAASAREIFYIAIEDGS-----LVEKC 529
Query: 661 HMRLQSELSCISIPQKHPERRKS 683
L E++C+ + ++ KS
Sbjct: 530 RKTLAYEVACLDVTPLDEKQNKS 552
>gi|384500266|gb|EIE90757.1| hypothetical protein RO3G_15468 [Rhizopus delemar RA 99-880]
Length = 1057
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 42/225 (18%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+ PI D V D + Q+ C G EGSLRIIR+G+ L + L PI G+ G W
Sbjct: 327 NLGPITDFCVADKGGQT--QVITCSGAGKEGSLRIIRNGVGLNE-LAMIPI-SGVKGIWA 382
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVC--TLACGLVADGLLVQ 584
+ + L++SFV +TR+L++ + T V D+ TL G V DG+++Q
Sbjct: 383 L------GEYDLLLMSFVHQTRLLQLQKDHTIVQLDTFSAIDLNARTLVAGCVVDGMIIQ 436
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFI- 643
+ ++VRL M TM + W + +I V++ NP I
Sbjct: 437 VTDHSVRL-MDTM-----------SLLDVWSSDE-----------LITVASVNPTQCVIS 473
Query: 644 LG---VRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
LG + +L V + ++ + RL E+SCI I HP ++ S
Sbjct: 474 LGFGKLVALQVLNRKLNVIGETRLSFEISCIDI---HPIGSRTES 515
>gi|353236335|emb|CCA68332.1| probable splicing factor 3B subunit 3 [Piriformospora indica DSM
11827]
Length = 1243
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 172/457 (37%), Gaps = 107/457 (23%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRT 514
LV ++++ PIL V + D + CG + + R ++ G+ +E+ L +
Sbjct: 442 LVLLDELESLDPILAARVQNLPDTS--LFYTACGKGAKSTFRTLKHGLEVEENGNSDLPS 499
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
P WT+++ +D Y S++VLSF+ T VL G ++ +S GF TLA
Sbjct: 500 IP-----NAVWTLKLAETDQYDSYIVLSFINGTLVLSFGEEIEEIPNS-GFLSSEPTLAA 553
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ L+Q+H +R + + P+ M IV+
Sbjct: 554 QQLGSDALLQVHPRGIRHVLSDKRVNEWRAPI----------------------GMAIVA 591
Query: 635 TSNPCFLFILGVRSLSVSHYEI-YEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNS 693
+ ++ + S + ++E+ YE Q Q ER+ S + +
Sbjct: 592 ATTNKRQVVVALSSAELVYFELDYEGQLNEFQ-------------ERKAMGSTVLAL--- 635
Query: 694 SVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLA-------SGSIVLTNTMGTAI 746
SV +P G+ +G +V ++S P L +++ SI + + ++I
Sbjct: 636 SVGEVPEGLQRFKYLAVGCEDQTVRIISLDPDSTLEMISLQAVTAPPSSISIADMFDSSI 695
Query: 747 SGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIR 806
P +V GL+NG+LLR + P + +T
Sbjct: 696 DKHRPTT---------FVNIGLQNGVLLR--------------TVLDPTNGKLADTR--- 729
Query: 807 SGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARH 866
TR +G PV LV ++ALS R WL T +
Sbjct: 730 -----------------------TRFLGNRPVRLVRTQVHGSPGVLALSSRSWLNYTYQG 766
Query: 867 SLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ +T +++ A V + CP G + +A N+L +
Sbjct: 767 LVHFTPLAYDRLDGACSVNAELCPDGFIGIANNTLRI 803
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G + +V VFG+I+ LA F KD +V SDSG++ L + + +
Sbjct: 76 GKLSTVLVYDVFGSIRSLAA------FRLTGGT---KDYAIVGSDSGRIVILEYDPKQNA 126
Query: 136 FFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
F + Q G R G+MLA D G + VSA E ++ L+ + +++
Sbjct: 127 FNKLYQETYGKTGARRIVPGQMLATDPKGRSLMVSAMEKAKLVYVLNRDAAANL 180
>gi|452003044|gb|EMD95501.1| hypothetical protein COCHEDRAFT_1165632 [Cochliobolus
heterostrophus C5]
Length = 1116
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 145/328 (44%), Gaps = 39/328 (11%)
Query: 366 DSDSGNAK-EPSKHVCSW-SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECL 423
D +SG+ + EP + +WE + + V D G +M + + G +V +
Sbjct: 254 DDESGDLQTEPLDEATIFVAWERIDAQ--RFVLADDYGRLYMFMLVLNAQG-RVQSWKLD 310
Query: 424 YKGPPCKA--LLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY-- 479
G +A L++++ ++ GD V++ + NIAPILD +++D
Sbjct: 311 VIGQTSRASTLVYLDAGYVFVGSHQGDSQVIRIAEKSMEIVQTFSNIAPILDFTIMDMGN 370
Query: 480 ---------HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMK 530
+ + ++ G +GSLR +RSG+ LE L + + I+ + +R
Sbjct: 371 RSGEGQTNEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDLGVLGEM-EHISELFCLRSA 429
Query: 531 VSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQN 588
S Y L++SFV E+RV R +V + V D TLA + G +VQ+
Sbjct: 430 PSAQYTDTLLVSFVGESRVFRFDSQGEVEEVDEFVSLALDETTLAAANIPQGRIVQVTNG 489
Query: 589 AVRLCMPTMVAHSGGIPLSYPVCTSWFP-EHVSISLGAVAHNMIIVSTSNPCFLFILGVR 647
R+C GG+ + + W P + +I+ +V ++VS + +
Sbjct: 490 RARIC-----DLDGGM-----MTSEWVPADGKTITAASVNATHVLVSLGG------VTIV 533
Query: 648 SLSVSH-YEIYEMQHMRLQSELSCISIP 674
SLS++ ++ + + +S+++C+++P
Sbjct: 534 SLSMADGLQVVKEKTFGAESQVACVTVP 561
>gi|326474493|gb|EGD98502.1| UV-damaged DNA binding protein [Trichophyton tonsurans CBS 112818]
gi|326481558|gb|EGE05568.1| UV-damaged DNA binding protein [Trichophyton equinum CBS 127.97]
Length = 1147
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFL 440
+WE + + + D G F + + +D + V + Y G +A L++++G +
Sbjct: 295 AWEQVDGQ--RWLLADDYGRLFFLMLVLDTD-NAVESWKVDYLGVTSRASVLVYLDGGIV 351
Query: 441 SAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDE---------KRDQMFACC 491
GD V++ + G I NIAPILD +++D D + ++
Sbjct: 352 FVGSHQGDSQVIQIKEGGFDLIQTISNIAPILDFTIMDMGDRLGATREFSSGQTRIVTGS 411
Query: 492 GVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
G +GSLR +RSG+ +E+L A + + IT W +R +P+ L++SFV ETRV
Sbjct: 412 GAFGDGSLRSVRSGVGIEELGVLASM-EHITDLWALRSACPEPFSDTLLVSFVNETRVF 469
>gi|261196131|ref|XP_002624469.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
gi|239587602|gb|EEQ70245.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
gi|239614558|gb|EEQ91545.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis ER-3]
gi|327356791|gb|EGE85648.1| pre-mRNA-splicing factor rse1 [Ajellomyces dermatitidis ATCC 18188]
Length = 1209
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 113/260 (43%), Gaps = 35/260 (13%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++D V + D+ Q++ CG S R ++ G+ + +++ +
Sbjct: 409 ENVNLVES--INSLNPLMDCKVANLTDDDAPQIYTICGTGARSSFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ D + ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTREDEFDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI + V+
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADRRVNEWPA-----PQHRSIVAATTNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS---------- 684
S+ ++ S++ Y+ + + ++C+S+ + R +SS
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD----EKREMSGTVTCLSLGEVPKGRARSSFLAVGCDDST 629
Query: 685 ------SPISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 630 VRILSLDPDSTLENKSVQAL 649
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G ++S+ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKIRSLFSQDVFGIIRTLAA------FRLAGS---SKDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGIRRVIPGQYLAVDPKGRACLIA 139
>gi|1399512|gb|AAC47162.1| repE [Dictyostelium discoideum]
Length = 1139
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 174/469 (37%), Gaps = 113/469 (24%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
+ Y NI P++D VVD + + Q+ C G +GSLRIIR+GI + + + +
Sbjct: 336 VTYLEAFTNIGPVVDFCVVDAEKQGQAQIVTCSGTYRDGSLRIIRNGIGIAE--QASIEL 393
Query: 519 QGITGTWTVRMK---------------------VSDPYHSFLVLSFVEETRVLRVGLNFT 557
+GI G + + ++D +L+ SF+E T+VL
Sbjct: 394 EGIKGIFPINNNNNNNNNNNNNNNNNNNNNSNGITDSKDRYLITSFIECTKVLSFQGEEI 453
Query: 558 DVTDSVGFRPDVCTLACGLVAD-GLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP 616
+ T+ G + TL CG + LL+QI ++ L ++ + W
Sbjct: 454 EETEFEGLESNCSTLYCGTIDKLNLLIQITNVSINLIDSN----------TFKRVSQWNV 503
Query: 617 E-HVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQ 675
E I+L + + I++S F ++ S+ I ++ + L E+SCI I
Sbjct: 504 EPSRRINLVSTNQDQIVLSIDKSLLYF-----QINSSNKSIQLVKEIELPHEISCIDI-- 556
Query: 676 KHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGS 735
SP ++ + G+ T I P++E + P
Sbjct: 557 ---------SPFDSFMDTKSQLVSVGLWNDITLRI-FKLPTLEEIWKEP----------- 595
Query: 736 IVLTNTMGTAISGCIPQDVRLVLADQF-YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSP 794
+G I +P+ + ++ D Y+ L +G L +F++
Sbjct: 596 ------LGGEI---LPRSILMISFDSIDYIFCSLGDGHLFKFQFD--------------- 631
Query: 795 ISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIAL 854
SSF+ D+ + L G P+ L ++ A+
Sbjct: 632 -----------------FSSFKLFDKRKLTL--------GTQPIILKKFKLKNTINIFAI 666
Query: 855 SDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
SDRP ++ + L Y+ ++ + T+ T S P + NSL +
Sbjct: 667 SDRPTVIYSHNKKLFYSVVNLKDVTNVTSFNSDGFPNSMAIATTNSLTI 715
>gi|393236715|gb|EJD44262.1| hypothetical protein AURDEDRAFT_137476 [Auricularia delicata
TFB-10046 SS5]
Length = 1244
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/448 (18%), Positives = 176/448 (39%), Gaps = 84/448 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRD--QMFACCGVAPEGSLRIIRSGISLEKLLRTAP 516
L+ + +I PI+D V++ D Q + CG S R++R G+ +E+ + ++
Sbjct: 387 LLLCDSLDSINPIIDAKVLNLMPTISDTPQFYVACGRGARSSFRLLRHGLEVEENI-SSD 445
Query: 517 IYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG 575
+ GI WT +++ DP+ +++VLSFV T VL +G + ++ GF TL
Sbjct: 446 LPSGIPNAVWTTKIRADDPFDTYIVLSFVNGTLVLTIGETIEECQET-GFLSAEPTLGVQ 504
Query: 576 LVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVST 635
+ D L+Q++ + +R + + +P IV
Sbjct: 505 QIGDDALLQVYPHGIRHILADKRVNEWKVP----------------------SGKTIVQA 542
Query: 636 SNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSV 695
+ ++ + S + ++E + L +L+ ++ +R+ S + +S + V
Sbjct: 543 ATNSRQVVVALNSAELVYFE------LDLDGQLN------EYQDRKAMGSVVLALSMAEV 590
Query: 696 PALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVR 755
P G +G +V ++S P L ++ ++ + I I V
Sbjct: 591 ---PEGRQRTPYLAVGCEDQTVRIISLDPDNTLETISLQALTAPPS-AICIVAIIDAAVN 646
Query: 756 LVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSF 815
+ ++ +V GL +G+ LR + P++ +T
Sbjct: 647 KI-SETLFVNIGLTSGLFLR--------------TVLDPVTGELTDTR------------ 679
Query: 816 ESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISF 875
TR +G P+ L ++ + ++ALS R WL + +L T + F
Sbjct: 680 --------------TRFLGTRPIRLNRVTIAGKPALLALSSRMWLNYAHQEALHLTPLIF 725
Query: 876 QPSTHATPVCSVECPKGILFVAENSLNL 903
P + + + CP G + + +++ +
Sbjct: 726 DPLDYVSGFTADLCPDGFIGLKGSTIKI 753
>gi|166240328|ref|XP_637896.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
gi|238064940|sp|B0M0P5.1|DDB1_DICDI RecName: Full=DNA damage-binding protein 1; AltName: Full=DNA
repair protein E; AltName: Full=UV-damaged DNA-binding
protein 1
gi|165988543|gb|EAL64385.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
Length = 1181
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 174/469 (37%), Gaps = 113/469 (24%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
+ Y NI P++D VVD + + Q+ C G +GSLRIIR+GI + + + +
Sbjct: 378 VTYLEAFTNIGPVVDFCVVDAEKQGQAQIVTCSGTYRDGSLRIIRNGIGIAE--QASIEL 435
Query: 519 QGITGTWTVRMK---------------------VSDPYHSFLVLSFVEETRVLRVGLNFT 557
+GI G + + ++D +L+ SF+E T+VL
Sbjct: 436 EGIKGIFPINNNNNNNNNNNNNNNNNNNNNSNGITDSKDRYLITSFIECTKVLSFQGEEI 495
Query: 558 DVTDSVGFRPDVCTLACGLVAD-GLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP 616
+ T+ G + TL CG + LL+QI ++ L ++ + W
Sbjct: 496 EETEFEGLESNCSTLYCGTIDKLNLLIQITNVSINLIDSN----------TFKRVSQWNV 545
Query: 617 E-HVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQ 675
E I+L + + I++S F ++ S+ I ++ + L E+SCI I
Sbjct: 546 EPSRRINLVSTNQDQIVLSIDKSLLYF-----QINSSNKSIQLVKEIELPHEISCIDI-- 598
Query: 676 KHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGS 735
SP ++ + G+ T I P++E + P
Sbjct: 599 ---------SPFDSFMDTKSQLVSVGLWNDITLRI-FKLPTLEEIWKEP----------- 637
Query: 736 IVLTNTMGTAISGCIPQDVRLVLADQF-YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSP 794
+G I +P+ + ++ D Y+ L +G L +F++
Sbjct: 638 ------LGGEI---LPRSILMISFDSIDYIFCSLGDGHLFKFQFD--------------- 673
Query: 795 ISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIAL 854
SSF+ D+ + L G P+ L ++ A+
Sbjct: 674 -----------------FSSFKLFDKRKLTL--------GTQPIILKKFKLKNTINIFAI 708
Query: 855 SDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
SDRP ++ + L Y+ ++ + T+ T S P + NSL +
Sbjct: 709 SDRPTVIYSHNKKLFYSVVNLKDVTNVTSFNSDGFPNSMAIATTNSLTI 757
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 30 IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGT 89
++ V K + V G+ P +++ K T IE+ ++ +DG+ + + + ++G
Sbjct: 1 MYNFVSTVQKPTSVTHSVTGNFTGPNDKNLIISKCTKIEIFLMDQDGL-KPMFDVNIYGR 59
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I L K F+ S+ +D L + ++S K LA+ E A + +
Sbjct: 60 ISVL------KLFSVAGSK---QDYLFISTESFKFCILAYDYEKKEIITKASGNAEDTIG 110
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSL 181
+ G++ +D G ++A+ YE L L +L
Sbjct: 111 RPTEAGQLGIIDPDGRIVALHLYEGLLKLITL 142
>gi|116207186|ref|XP_001229402.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183483|gb|EAQ90951.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1211
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + ++ P++D + + E Q++ CG + R+++ G+ + +++ +
Sbjct: 414 LVLVESMDSMNPLIDCKIANLTGEDAPQIYTVCGNRARSTFRMLKHGLEVSEIVASE--- 470
Query: 519 QGITGT----WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ GT WT ++ D Y ++VLSF T VL +G +VT+S GF V TLA
Sbjct: 471 --LPGTPAAVWTTKLTKYDEYDGYIVLSFTNATLVLSIGETVEEVTES-GFLTSVPTLAV 527
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R + V +P P+H SI A N ++++
Sbjct: 528 QQLGEEGLIQVHPKGIRHIVQGRVNE-------WPA-----PQHRSIVAAATNENQVVIA 575
Query: 635 TSNPCFLFILGVRSLSVSHYE 655
S+ ++ S++ Y+
Sbjct: 576 LSSGEIVYFEMDADGSLAEYD 596
>gi|167517245|ref|XP_001742963.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778062|gb|EDQ91677.1| predicted protein [Monosiga brevicollis MX1]
Length = 1670
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 38/267 (14%)
Query: 451 VLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEK 510
V E + ++ NI PI+D +VD + Q+ +CCG +G LRI+R G+ ++
Sbjct: 374 VQAEADNKVKVLQEYPNIGPIVDFEMVDLDGHGQQQVVSCCGSNQDGCLRILRKGVGIDV 433
Query: 511 LLRTAPIYQGITGTWTVR--MKVSDPYHSFLVLSFVEETRVLRVGLN------------- 555
L + +G+ W +R + + H L L F+E+T L + +
Sbjct: 434 L--ASLDLEGLQDLWCLRSASNLGEDQHDVLALKFLEQTAFLSLAGDEVCLLYSTPTSHS 491
Query: 556 FT--DVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
+T D D G ++ L CG V DG+ + + RL + T
Sbjct: 492 YTELDGVDVAGANTELPALHCGNVRDGMWLVVTSQDARLL----------DAVDRTEVTR 541
Query: 614 WFPEH-VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYE-IYEMQHMRLQSELSCI 671
W P + I + A +++ V++ + + +LS+S E +++M++ L E++C+
Sbjct: 542 WSPPNGKGIDVCASTGDLLAVASGSDLY-------ALSLSRTEGLHDMKNATLDHEIACL 594
Query: 672 SIPQKHPERRKSSSPISLVSNSSVPAL 698
SI P++ + L ++ S+ A
Sbjct: 595 SIRASGPDQGAGTILAGLWTDFSLRAF 621
>gi|195395112|ref|XP_002056180.1| GJ10363 [Drosophila virilis]
gi|194142889|gb|EDW59292.1| GJ10363 [Drosophila virilis]
Length = 1140
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 30/265 (11%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMVLKEENGRL--VYTSPIQN---IAPILDMSVVDYHD 481
P C + +++ FL GD +++ + + Y P++N +APILD++VVD
Sbjct: 310 PEC--ITYLDNGFLYIGSRHGDSQLVRLSSEAIDGSYVIPVENFTNLAPILDIAVVDLDR 367
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSD-PYHSFLV 540
+ + Q+ C G +GSLRIIR GI +++ GI G W++++ + D Y + LV
Sbjct: 368 QGQGQIITCSGSFKDGSLRIIRIGIGIQE--HACIDLPGIKGMWSLKVGIDDSAYENTLV 425
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
L+FV TR+L + + T+ GF D+ T C V L+Q+ +VRL
Sbjct: 426 LAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCANVDYDQLIQVTAESVRLVKSATKTL 485
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHN--MIIVSTSNPCFLFILGVRSLSVSHYEIYE 658
G W PE S+G V+ N I+ +++ F +S+ + E
Sbjct: 486 VG----------EWKPEG-DRSIGVVSCNSTQIVAASAREIFY-------ISIEDGSLVE 527
Query: 659 MQHMRLQSELSCISIPQKHPERRKS 683
L E++C+ + ++ KS
Sbjct: 528 KCRKTLPYEVACLDVTPLDEKQTKS 552
>gi|407919154|gb|EKG12409.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
phaseolina MS6]
Length = 1210
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 37/261 (14%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN L + P N P L V + D+ Q++ CG + + + G+ + +++ +
Sbjct: 409 ENISLAQSVPSMN--PTLGCKVANLTDDDAPQIYTVCGTGARSTFKTLTHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ WT +++ D Y ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPEAVWTTKIRTGDEYDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSSTRTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
L+ + L+Q+H +R +GG +P P+H +I + V+
Sbjct: 525 QLLGEDALIQVHPKGIRHI------QAGGRINEWPA-----PQHRTIVAATTNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS--------- 685
S+ ++ S++ Y+ + + ++C+S+ + PE R SS
Sbjct: 574 LSSGEIVYFEMDVDGSLAEYD----EKKEMSGTVTCLSLGEV-PEGRVRSSFLAVGCDDS 628
Query: 686 --------PISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 629 TVRILSLDPDSTLENKSVQAL 649
>gi|296814646|ref|XP_002847660.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
gi|238840685|gb|EEQ30347.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
Length = 1235
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 37/261 (14%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++ S+ + +E Q++ CG S R ++ G+ + +++ +
Sbjct: 409 ENLNLVES--IASLNPLMSCSIANLTEEDAPQLYTLCGTGARSSFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D Y +++VLSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRNDQYDAYIVLSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI + ++
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADQRVNEWPA-----PQHRSIVAATTNERQVAIA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS--------- 685
S+ ++ S++ Y+ + ++ ++C+S+ + PE R SS
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD----EKRQMSGTVTCLSLGEV-PEGRVRSSFLAVGCDDS 628
Query: 686 --------PISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 629 TVRILSLDPESTLENKSVQAL 649
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G VQ++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVQTLFSQDVFGIIRSLAA------FRLAGSN---KDYIIIGSDSGRITIVEYVPAQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVVPGQYLAVDPKGRACLIA 139
>gi|403370717|gb|EJY85226.1| Spliceosomal protein sap, putative [Oxytricha trifallax]
Length = 1203
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 176/442 (39%), Gaps = 85/442 (19%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISL-EKLLRTAPIYQGITGTW 525
N+A I DM V D E Q++ G +G LR++R G+++ EK + P Q
Sbjct: 403 NLASINDMKVEDLTGEGNPQIYLASGRGAQGCLRVLRHGLTIIEKAVTAMP--QKPLNVI 460
Query: 526 TVRMKVSDPYHSFLVLSFVEETRVLRVGL-NFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
TV+ K +D + ++++SF ++T VL +G ++V DS GF + TL G++ D +Q
Sbjct: 461 TVKGKTTDVFDKYMIVSFQQQTLVLSIGQEKVSEVKDS-GFVDNERTLHVGILEDNSYIQ 519
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
+ P + H G + W I + VS ++
Sbjct: 520 V--------TPKSIIHVKGDQQNRKRA-KWDSGQGKIVKACSNQRQVAVSIEGGQIVYF- 569
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
L + E++ SE++CI I PE R+ ++
Sbjct: 570 ---ELDEMSGTLNEVESRFYDSEVACIDIADV-PEGRQRCRFLA---------------- 609
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYV 764
+G +V+++S P+ L+ ++ ++ IS +D Q ++
Sbjct: 610 -----VGYADKTVKIMSLDPESCLQRISMQALPAHPESVALIS--FQRDEVAQQQQQLFL 662
Query: 765 LAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPIN 824
GL NG+LLR +N+ +G+ + S
Sbjct: 663 HVGLVNGVLLR------------------------TLVDNV-TGVLSDSR---------- 687
Query: 825 LQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQT--ARHSLAYTSISFQPSTHAT 882
TR +G + L + ++AL ++PWL T + + + T +S++ A+
Sbjct: 688 -----TRFLGTNSISLAKVRQGNTNALVALCNKPWLCYTHMSTNKVNITPLSYEMLEVAS 742
Query: 883 PVCSVECPK-GILFVAENSLNL 903
CS +CP GI+ ++ N+L +
Sbjct: 743 SFCSEKCPDGGIVAISGNTLRI 764
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGE-DGIVQSVCEQAVFGT 89
YL L + + + +G+ P +++V K +E++ + E +Q V Q VFG
Sbjct: 2 YLYSLTLNQATAINNSVYGNFSGPKQHEIVVSKGKIMEMLRLDEATQKLQVVYRQEVFGL 61
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
I+ + +P+ M KD LVV SDSGK+ L + E ++F + Q G
Sbjct: 62 IRKM--IPFR-------LLGMQKDFLVVGSDSGKIVILEYDGEHNKFVKIHQETFGKTGC 112
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
R G +A D G I + A E + +F L+ S + +
Sbjct: 113 RRIVPGEYIAADPKGRAIMIGAVEKQKFVFILNRDSQNKL 152
>gi|350290373|gb|EGZ71587.1| Pre-mRNA-splicing factor rse-1 [Neurospora tetrasperma FGSC 2509]
Length = 1209
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 104/227 (45%), Gaps = 19/227 (8%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I ++ P +D V + E Q+++ CG + R+++ G+ + +++ + +
Sbjct: 414 LVLVESIDSMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIV-ASELP 472
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WT ++ D Y +++VLSF T VL +G +V+DS GF TLA +
Sbjct: 473 GTPSAVWTTKLTKYDQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTTAPTLAVQQMG 531
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ L+Q+H +R + V +P P+H SI N ++++ S+
Sbjct: 532 EDGLIQVHPKGIRHIVQGRVNE-------WPA-----PQHRSIVAATANENQVVIALSSG 579
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
++ S++ Y+ + + ++ +S+ Q PE K SS
Sbjct: 580 EIVYFEMDSDGSLAEYD----EKKEMSGTVTSLSVGQV-PEGLKRSS 621
>gi|189044515|sp|Q7RYR4.2|RSE1_NEUCR RecName: Full=Pre-mRNA-splicing factor rse-1
Length = 1209
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 104/227 (45%), Gaps = 19/227 (8%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I ++ P +D V + E Q+++ CG + R+++ G+ + +++ + +
Sbjct: 414 LVLVESIDSMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIV-ASELP 472
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WT ++ D Y +++VLSF T VL +G +V+DS GF TLA +
Sbjct: 473 GTPSAVWTTKLTKYDQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTTAPTLAVQQMG 531
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ L+Q+H +R + V +P P+H SI N ++++ S+
Sbjct: 532 EDGLIQVHPKGIRHIVQGRVNE-------WPA-----PQHRSIVAATANENQVVIALSSG 579
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
++ S++ Y+ + + ++ +S+ Q PE K SS
Sbjct: 580 EIVYFEMDSDGSLAEYD----EKKEMSGTVTSLSVGQV-PEGLKRSS 621
>gi|330792580|ref|XP_003284366.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
gi|325085712|gb|EGC39114.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
Length = 1064
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 173/443 (39%), Gaps = 98/443 (22%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISL-EKLLRTAPIYQGITGTW 525
NI PI+D +VD + + Q+ C G +G+LR+IR+GI + EK L +G+ G W
Sbjct: 304 NIGPIVDFCLVDTEKQGQAQIVTCSGTYRDGTLRVIRNGIGIAEKALIE---LEGVKGLW 360
Query: 526 TVRMKV-SDPYH---SFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV-ADG 580
++ SDP + +L++SF+ T+VL+ + T+ G + T+ C + +
Sbjct: 361 PIKENDPSDPLNPKDQYLIVSFIGYTKVLQFQGEEIEETEFEGLDSNSSTILCSNIDKEN 420
Query: 581 LLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPC 639
++VQ+ A+ L P+++ W P I+L + + I +S
Sbjct: 421 VIVQVTNQAINLIN----------PITFKRVDQWKSPSGSPINLVSSNQSQIALSIGKSL 470
Query: 640 FLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALP 699
+ F + +S I ++ + L E+SCI I SP+ +S
Sbjct: 471 YYFEINEQS------RIELIKEIELPHEISCIDI-----------SPLDSFMDSRSQICA 513
Query: 700 AGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLA 759
G+ T + P++E + P +G I IP+ + ++
Sbjct: 514 VGLWTDITLRL-FKLPTLEEIHKEP-----------------LGGEI---IPRSILMISF 552
Query: 760 DQF-YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESK 818
+ Y+ L +G L +F + IA K
Sbjct: 553 EGIDYIFCSLGDGHLFKF-----------------------------KIDIANNWKLFDK 583
Query: 819 DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPS 878
+L + Q P+ L ++ ALSDRP ++ + L Y+ ++ +
Sbjct: 584 RKLTLGTQ----------PIILKKFKLKNTINIFALSDRPTVIYSNNKKLFYSVVNLKEV 633
Query: 879 THATPVCSVECPKGILFVAENSL 901
T+ T S P + +E+SL
Sbjct: 634 TNVTSFNSDAFPGSMAISSESSL 656
>gi|119473054|ref|XP_001258481.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
181]
gi|119406633|gb|EAW16584.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
181]
Length = 1209
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 37/261 (14%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV T + ++ P++D +V+ +++ Q++ G S R ++ G+ + +++ +
Sbjct: 409 ENLNLVET--LNSLNPLIDSKIVNLNEDDAPQIYTVSGTGARSSFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D + ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRADEFDAYIILSFANGTLVLSIGETVEEVTDT-GFLSTAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R + + +P P+H SI A + V+
Sbjct: 525 QQLGEDSLIQVHPRGIRHILADRRVN------EWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS--------- 685
S+ ++ +++ Y+ + ++ ++C+S+ + PE R SS
Sbjct: 574 LSSGEIVYFEMDADGTLAEYD----ERRQMSGTVTCLSLGEV-PEGRVRSSFLAVGCDDS 628
Query: 686 --------PISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 629 TVRILSLDPDSTLENKSVQAL 649
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G + + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKITPIYSQDVFGIIRSLAA------FRLAGSS---KDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVVPGQYLAVDPKGRACLIA 139
>gi|302655264|ref|XP_003019424.1| hypothetical protein TRV_06556 [Trichophyton verrucosum HKI 0517]
gi|291183145|gb|EFE38779.1| hypothetical protein TRV_06556 [Trichophyton verrucosum HKI 0517]
Length = 1027
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 15/179 (8%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFL 440
+WE + + + D G F + + ++ + V + + G +A L++++G +
Sbjct: 295 AWEQVDGQ--RWLLADDYGRLFFLMLVLDAE-NAVDTWKVDFLGVTSRASVLVYLDGGIV 351
Query: 441 SAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEK---------RDQMFACC 491
GD V++ + G I NIAPILD +V+D D + ++
Sbjct: 352 FVGSHQGDSQVIQIKEGGFDLVQTISNIAPILDFTVMDMGDRSGATREFSSGQTRIVTGS 411
Query: 492 GVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
G +GSLR +RSG+ +E+L A + + IT WT+R +P+ L++SFV ETRV
Sbjct: 412 GAFGDGSLRSVRSGVGIEELGVLASM-EHITDLWTLRSACPEPFLDTLLVSFVNETRVF 469
>gi|156084934|ref|XP_001609950.1| splicing factor 3b, subunit 3, 130kD [Babesia bovis T2Bo]
gi|154797202|gb|EDO06382.1| splicing factor 3b, subunit 3, 130kD, putative [Babesia bovis]
Length = 1169
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 456 NGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL---- 511
N L + +++ I D+ V+D + Q+F CG +LR++R G+S+E+L
Sbjct: 392 NQNLQLVDELSSLSAITDLKVIDVQGLGQQQIFLGCGKGERSTLRVLRHGLSVEELADNE 451
Query: 512 LRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCT 571
L P WTV V Y F+++ F T VL VG +VTDS F + T
Sbjct: 452 LPGRP-----KQVWTVPTGVDSIYDGFILVGFEGNTLVLSVGEAVEEVTDSC-FLTSITT 505
Query: 572 LACGLVADGLLVQIHQNAVR 591
L ++ DG +Q+H VR
Sbjct: 506 LHVSMMGDGSYIQVHDGGVR 525
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 43 VLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKF 102
+ Q G+ +P + ++V + +IEL+ + G ++S+C VFG ++ ++ F
Sbjct: 15 ITQAVQGNFSAPKAQEIVVVRSHTIELLSPDDSGKLRSLCVSEVFGIVRVVST------F 68
Query: 103 NAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDS 162
+Q +D LVV SDSG+L L +CN F V G R G+ LAVD
Sbjct: 69 RLTGTQ---RDYLVVCSDSGRLVILEYCNVSATFKRVHCETYGKTGIRRIVPGQYLAVDP 125
Query: 163 SGCLIAVSAYEDRLGLFSLSMSSGSDI 189
G + V A E ++ L+ S +++
Sbjct: 126 KGRALIVGAVEKEKFVYILNRDSKANL 152
>gi|367050506|ref|XP_003655632.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
gi|347002896|gb|AEO69296.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
Length = 1211
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 90/451 (19%), Positives = 175/451 (38%), Gaps = 96/451 (21%)
Query: 464 PIQNIA---------PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
P++N+A P++D V + E Q++A CG + R+++ G+ + +++
Sbjct: 410 PLENLALVESLNSMNPLVDCKVANLTGEDAPQIYAVCGNRARSTFRMLKHGLEVSEIV-A 468
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + + WT ++ D Y ++VLSF T VL +G +VT+S GF V TLA
Sbjct: 469 SELPGTPSAVWTTKLTKYDEYDGYIVLSFTNATLVLSIGETVEEVTES-GFLTSVPTLAV 527
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R + V +P P+H SI A + ++++
Sbjct: 528 QQLGEEGLIQVHPKGIRHIVQGRVNE-------WPA-----PQHRSIVAAATNESQVVIA 575
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
S+ ++ S++ Y+ E+++ S ++ +S
Sbjct: 576 LSSGEIVYFEMDADGSLAEYD-----------------------EKKEMSGTVTSLSLGK 612
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV 754
V P G+ +G +V +L P+ L + SI + +++S +D
Sbjct: 613 V---PEGLTRSSFLAVGCDDCTVRILGLDPESTLEM---KSIQALTSAPSSLSIMSMEDS 666
Query: 755 RLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSS 814
+ Y+ GL +G+ LR
Sbjct: 667 --TGGNTLYLHIGLHSGVYLR--------------------------------------- 685
Query: 815 FESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL--LQTARHSLAYTS 872
DE+ L ++ +G P L +S ++ALS RPWL + + T
Sbjct: 686 -TVLDEVTGELTDTRSKFLGPKPTKLFQVSVQNQPCVLALSSRPWLGYMDPLSKNFVMTP 744
Query: 873 ISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+S+ + S +C +G++ + N L +
Sbjct: 745 LSYAELEYGWNFSSEQCLEGMVGIHANFLRI 775
>gi|399216895|emb|CCF73582.1| unnamed protein product [Babesia microti strain RI]
Length = 1232
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 178/457 (38%), Gaps = 101/457 (22%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL----LRT 514
L+ + +++P++DM + D +++ CG + +I+R GIS+E+L L
Sbjct: 399 LLLVDELTSLSPVVDMKIADARGLDTSEIYLACGRGSRSTFQILRPGISVEELANNELPG 458
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
P Y ++++ K +D ++++ F T VL VG +V++S F + TL
Sbjct: 459 YPRY-----VFSLKDKNADDCVGYIIVVFEGNTLVLSVGDAVEEVSNSF-FNTETTTLCA 512
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIV 633
L+ D +QIH+ +R + V+ W P I + I++
Sbjct: 513 MLMYDDSFIQIHEGGIRHIIDNHVSE-------------WKPPTSKRIKCCSANTRQILI 559
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNS 693
+ S ++ + SH + E+ +++C++I Q P R SS
Sbjct: 560 ALSGGEVIYF----EIDESH-ALVEIFKRNFGVDITCMAI-QAVPTDRVYSS-------- 605
Query: 694 SVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQD 753
G I G V V+++S ++GL+ L S L TA S CI Q
Sbjct: 606 ------FGAISGLDNV-------VKLISLEKEKGLKQL---STQLLPNNATAESVCIAQI 649
Query: 754 VRLV-------LADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIR 806
LV +++ GL G+++R NI
Sbjct: 650 DSLVRDAGHMRRNSSLFLVVGLNTGVMIR---------------------------SNID 682
Query: 807 SGIAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARH 866
+ A S S+ + R + + LV + D + +A+SD+ WL +
Sbjct: 683 AITGALSDQHSR--------FLGARAVRFS---LVKVGDGM--GFMAMSDKSWLCYAHQG 729
Query: 867 SLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
L + I++ H CS C G + ++ NSL +
Sbjct: 730 KLFTSYINYDMVEHVASFCSSHCSDGFVAISGNSLRI 766
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPW 98
K + V+ G+ + ++ + ++EL+ + G + V V+G I+ +A
Sbjct: 11 KPTAVVTAVVGNFSNSKKQEIALARGHTLELLQADDQGKLNCVYSTEVYGIIRCIA---- 66
Query: 99 NKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGR-- 156
F + +D LVV SDSG++ L F + F V GN+ + LG
Sbjct: 67 --PFRLTGAS---RDYLVVTSDSGRIVILEFNTAKNNFDRVHCETYGKSGNNGYNLGNRR 121
Query: 157 -----MLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
L VD G + ++A E + ++ L+ + S++
Sbjct: 122 IVPGHFLGVDPKGRALMLAALERQKFVYILNRDNKSNL 159
>gi|302654421|ref|XP_003019018.1| hypothetical protein TRV_07031 [Trichophyton verrucosum HKI 0517]
gi|291182708|gb|EFE38373.1| hypothetical protein TRV_07031 [Trichophyton verrucosum HKI 0517]
Length = 802
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 117/261 (44%), Gaps = 37/261 (14%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++ S+ + +E Q++ CG + S R ++ G+ + +++ +
Sbjct: 409 ENLNLVES--IASLNPLMAASIANITEEDAPQIYTLCGTSARSSFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D + +++VLSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLSRNDQFDAYIVLSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI + ++
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADQRVNEWPA-----PQHRSIVAATTNERQVAIA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS--------- 685
S+ ++ S++ Y+ + ++ ++C+S+ + PE R SS
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD----EKRQMSGTVTCLSLGEV-PEGRGRSSFLAVGCDDS 628
Query: 686 --------PISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 629 TVRILSLDPDSTLENKSVQAL 649
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G VQ++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVQTLFSQDVFGIIRSLAA------FRLAGS---SKDYIIIGSDSGRITIVEYVPAQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVVPGQYLAVDPKGRACLIA 139
>gi|327301962|ref|XP_003235673.1| UV-damaged DNA binding protein [Trichophyton rubrum CBS 118892]
gi|326461015|gb|EGD86468.1| UV-damaged DNA binding protein [Trichophyton rubrum CBS 118892]
Length = 1147
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFL 440
+WE + + + D G F + + +D + V + + G +A L++++G +
Sbjct: 295 AWEQVDGQ--RWLLADDYGRLFFLMLVLDAD-NAVESWKVDFLGVTSRASVLVYLDGGIV 351
Query: 441 SAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEK---------RDQMFACC 491
GD V++ + G I NIAPILD +++D D + ++
Sbjct: 352 FVGSHQGDSQVIQIKEGGFDLVQTISNIAPILDFTIMDMGDRSGATREFSSGQTRIVTGS 411
Query: 492 GVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
G +GSLR +RSG+ +E+L A + + IT W +R +P+ L++SFV ETRV
Sbjct: 412 GAFGDGSLRSVRSGVGIEELGVLASM-EHITDLWALRSACPEPFFDTLLVSFVNETRVF 469
>gi|195037449|ref|XP_001990173.1| GH18378 [Drosophila grimshawi]
gi|193894369|gb|EDV93235.1| GH18378 [Drosophila grimshawi]
Length = 1140
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 30/266 (11%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMVLKEENGRL--VYTSPIQN---IAPILDMSVVDYHD 481
P C + +++ FL GD +++ + + + P++N +APILD++VVD
Sbjct: 310 PEC--ITYLDNGFLYIGSRHGDSQLVRLSSEAIDGTFVIPVENFTNLAPILDIAVVDLDR 367
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSD-PYHSFLV 540
+ + Q+ C G +GSLRIIR GI +++ GI G W++++ + + Y + LV
Sbjct: 368 QGQGQIITCSGSFKDGSLRIIRIGIGIQE--HACIDLPGIKGMWSLKVGIDESSYENTLV 425
Query: 541 LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH 600
L+FV TR+L + + TD GF D+ + C V L+Q+ +VRL A
Sbjct: 426 LAFVGHTRILTLSGEEVEETDIPGFASDLQSFLCANVDYDQLIQVTAESVRLVKSATKAL 485
Query: 601 SGGIPLSYPVCTSWFPEHVSISLGAVAHN--MIIVSTSNPCFLFILGVRSLSVSHYEIYE 658
G W PE S+G V+ N I+ +++ F +S+ + E
Sbjct: 486 VG----------EWKPEG-DRSIGVVSCNTTQIVAASAREIFY-------ISIEDGSLVE 527
Query: 659 MQHMRLQSELSCISIPQKHPERRKSS 684
L E++C+ + ++ KS
Sbjct: 528 KCRKILPYEVACLDVTPLDEKQNKSD 553
>gi|70992271|ref|XP_750984.1| UV-damaged DNA binding protein [Aspergillus fumigatus Af293]
gi|66848617|gb|EAL88946.1| UV-damaged DNA binding protein, putative [Aspergillus fumigatus
Af293]
gi|159124553|gb|EDP49671.1| UV-damaged DNA binding protein, putative [Aspergillus fumigatus
A1163]
Length = 1140
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 135/308 (43%), Gaps = 35/308 (11%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFL 440
+WE + + + D G F + + SD +V + + G +A L+++ G L
Sbjct: 289 AWEQVDSQ--RWLLADDYGRLFFLMLVLDSD-SQVESWKLDHLGNTSRASVLVYLGGGIL 345
Query: 441 SAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFA 489
GD VL+ NG L + NIAPILD +++D + + ++
Sbjct: 346 FLGSHQGDSQVLRISNGPLEVVQTLSNIAPILDFTIMDLGNRSSESQTHEFSSGQARIVT 405
Query: 490 CCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRV 549
G +G+LR +RSG+ +E+L + IT W +++ S + L+++FV+ETRV
Sbjct: 406 GSGAFDDGTLRSVRSGVGMEELGVLGDMDH-ITDLWGLQVGSSGDFLDTLLVTFVDETRV 464
Query: 550 LRVGLN--FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH-SGGIPL 606
R + ++ +G TL + G ++Q+ + V ++A GG+
Sbjct: 465 FRFSSDGEVEEMDHFLGLSLSESTLLATNLPGGRILQVTEQRV------LIAEIEGGM-- 516
Query: 607 SYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQS 666
V W P + I A A++ IV + + +L + + ++ + S
Sbjct: 517 ---VIYEWTPPNQFIITAASANDDSIVLVAGGELVTVLNI----TNEVQVVTQKDFGADS 569
Query: 667 ELSCISIP 674
++S +++P
Sbjct: 570 QISGVTVP 577
>gi|296417673|ref|XP_002838477.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634416|emb|CAZ82668.1| unnamed protein product [Tuber melanosporum]
Length = 1202
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 22/232 (9%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV I ++ P++D + + D+ Q++ CG P + R ++ G+ +++ +
Sbjct: 403 ENLSLV--EAIDSMNPLVDCKIANLTDDDAPQIYTVCGSGPRSTFRTLKHGLETTEIVSS 460
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
G+ + WT ++ D + +++VLSF T VL +G +VTD+ GF TLA
Sbjct: 461 E--LPGVPSAVWTTKLTNGDEFDAYIVLSFTNGTLVLSIGETVEEVTDT-GFLSSAPTLA 517
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIV 633
+ + L+Q+H +R + +P P+H SI + + V
Sbjct: 518 VQQLGEDALLQVHPKGIRHIRADRRVN------EWPA-----PQHRSIVAASTNSRQVAV 566
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
+ S+ ++ ++ YE + + ++C+S+ + PE R SS
Sbjct: 567 ALSSGEIVYFEMDSDGQLAEYE----EKKEMSGTVTCLSLGEV-PEGRVRSS 613
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 29 NIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVI-IGEDGIVQSVCEQAVF 87
N+ + VL+ S + Q G +++ + + + L+ G V SV VF
Sbjct: 6 NMFMYSLTVLQPSAITQAILGAFSGKKQQEIIVAQGSRLSLLRPDAAQGKVHSVLTIDVF 65
Query: 88 GTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNP 147
G I+ LA F S KD ++V SDSG+++ L + ++++F ++HL
Sbjct: 66 GIIRCLAA------FRLAGSS---KDYVIVGSDSGRITILEYQPQVNKFH---RLHLETF 113
Query: 148 GNS---RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
G S R G+ LA D G +S+ E ++ L+ ++ +++
Sbjct: 114 GKSGVRRVIPGQFLACDPKGRACLISSVEKNKLVYVLNRNAQAEL 158
>gi|121700262|ref|XP_001268396.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL
1]
gi|119396538|gb|EAW06970.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL
1]
Length = 1209
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 155/411 (37%), Gaps = 95/411 (23%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + + ++ P++D + + +++ Q++A G + R ++ G+ + +++ +
Sbjct: 409 ENLNLVES--LNSLNPLIDSKIANLNEDDAPQIYAVSGTGARSTFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ D + ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRGDEFDAYIILSFANGTLVLSIGETVEEVTDT-GFLSTAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R + + +P P+H SI A + V+
Sbjct: 525 QQLGEDSLIQVHPRGIRHILADRRVN------EWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
S+ ++ S++ Y+ ERR+ S ++ +S
Sbjct: 574 LSSGEIVYFEMDADGSLAEYD-----------------------ERRQMSGTVTCLSLGE 610
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGL-----RVLASGSIVLTNTMGTAISGC 749
V P G + +G +V +LS P L + L S L N M A S
Sbjct: 611 V---PEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSAL-NIMSMADSSS 666
Query: 750 IPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGI 809
Y+ GL +G+ LR
Sbjct: 667 --------GGTTLYLHIGLYSGVYLR---------------------------------- 684
Query: 810 AATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL 860
DE+ L TR +G PV L +S ++ALS RPWL
Sbjct: 685 ------TVLDEVTGELSDTRTRFLGAKPVKLFRVSVRGQTAVLALSSRPWL 729
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G + + Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKITPIYSQDVFGIIRTLAA------FRLAGSN---KDYIIIGSDSGRITIIEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVVPGQYLAVDPKGRACLIA 139
>gi|302504587|ref|XP_003014252.1| hypothetical protein ARB_07557 [Arthroderma benhamiae CBS 112371]
gi|291177820|gb|EFE33612.1| hypothetical protein ARB_07557 [Arthroderma benhamiae CBS 112371]
Length = 762
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 116/261 (44%), Gaps = 37/261 (14%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++ S+ + +E Q++ CG S R ++ G+ + +++ +
Sbjct: 409 ENLNLVES--IASLNPLMAASIANITEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D + +++VLSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLSRNDQFDAYIVLSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI + ++
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADQRVNEWPA-----PQHRSIVAATTNERQVAIA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS--------- 685
S+ ++ S++ Y+ + ++ ++C+S+ + PE R SS
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD----EKRQMSGTVTCLSLGEV-PEGRVRSSFLAVGCDDS 628
Query: 686 --------PISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 629 TVRILSLDPDSTLENKSVQAL 649
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G VQ++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVQTLFSQDVFGIIRSLAA------FRLAGS---SKDYIIIGSDSGRITIVEYVPAQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVVPGQYLAVDPKGRACLIA 139
>gi|440636768|gb|ELR06687.1| pre-mRNA-splicing factor rse1 [Geomyces destructans 20631-21]
Length = 1212
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 39/262 (14%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++D V + +E Q+++ CG + R ++ G+ + +++ +
Sbjct: 412 ENLNLVES--IDSMNPLMDCKVANLTEEDAPQIYSICGTGARSTFRTLKHGLEVNEIVES 469
Query: 515 APIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
G+ + WT ++ D Y ++++L+F T VL +G +VTD+ GF TLA
Sbjct: 470 E--LPGVPSAVWTTKLTRGDEYDAYIILAFSNGTLVLSIGETVEEVTDT-GFLSSATTLA 526
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIV 633
+ + L+Q+H +R I V P+H SI + V
Sbjct: 527 VQQLGEDGLIQVHPKGIR-----------HIRADRRVNEWAAPQHRSIVAATTNAQQVAV 575
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS-------- 685
+ S+ ++ S++ Y+ + + ++C+S+ + PE R S+
Sbjct: 576 ALSSGEIVYFEMDSDGSLAEYD----EKREMSGTVTCLSLGEV-PEGRVRSNFLAVGCDD 630
Query: 686 ---------PISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 631 STVRILSLDPDSTLENKSVQAL 652
>gi|331238007|ref|XP_003331659.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309310649|gb|EFP87240.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1213
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 183/448 (40%), Gaps = 87/448 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + ++++API + Q A CG SLR++R G+ + +++ T+ +
Sbjct: 409 LVLSDELESLAPITGAKTGHLLNSDSAQTVASCGTGSRSSLRMLRHGLEVSEIV-TSELP 467
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
T WT R+ +D + +++L F+ T VL +G +V D+ G + T+A +
Sbjct: 468 GPPTNVWTTRLAETDEFDRYIILGFLNATLVLAIGETIVEVADT-GLLTNSPTIAIQQLD 526
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
L+QIH +R H G T W + G I+VSTSN
Sbjct: 527 SNGLLQIHPTGIRHI------HLDG------AITEW-----KVPPG----RKIVVSTSNR 565
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
+ ++G+ + ++E + L +L+ ++ E+++ + I+ +S S V
Sbjct: 566 RQV-VIGLSGGELIYFE------LDLDGQLN------EYQEQKEMGATITSLSLSEV--- 609
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVL 758
G IG +V+++S P VL + S+ + T+I CI + + +
Sbjct: 610 SKGRQRTPFLAIGLENLTVQIISLDPNS---VLETISLQALTAVPTSI--CIAELLDSSI 664
Query: 759 ---ADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSF 815
++ +V GL NG+LLR + ++ +T
Sbjct: 665 DKNSETLFVNIGLANGVLLR--------------TVLDSVNGQLTDTR------------ 698
Query: 816 ESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISF 875
TR +G PV L+ + +I LS R WL T ++ L + + +
Sbjct: 699 --------------TRFLGSRPVKLLRVKVDNKTSVIGLSSRTWLNYTFQNLLHFDPLIY 744
Query: 876 QPSTHATPVCSVECPKGILFVAENSLNL 903
+ + CP+G++ + +SL +
Sbjct: 745 DAIDNVHSFSAELCPEGLIGIVGSSLRI 772
>gi|326483043|gb|EGE07053.1| pre-mRNA-splicing factor rse1 [Trichophyton equinum CBS 127.97]
Length = 1209
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 116/261 (44%), Gaps = 37/261 (14%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++ S+ + +E Q++ CG S R ++ G+ + +++ +
Sbjct: 409 ENLNLVES--IASLNPLMAASITNITEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D + +++VLSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLSRNDQFDAYIVLSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI + ++
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADQRVNEWPA-----PQHRSIVAATTNERQVAIA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS--------- 685
S+ ++ S++ Y+ + ++ ++C+S+ + PE R SS
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD----EKRQMSGTVTCLSLGEV-PEGRVRSSFLAVGCDDS 628
Query: 686 --------PISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 629 TVRILSLDPDSTLENKSVQAL 649
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G VQ++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVQTLYSQDVFGIIRSLAA------FRLAGS---SKDYIIIGSDSGRITIVEYVPAQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVVPGQYLAVDPKGRACLIA 139
>gi|331221690|ref|XP_003323519.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309302509|gb|EFP79100.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1213
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 183/448 (40%), Gaps = 87/448 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + ++++API + Q A CG SLR++R G+ + +++ T+ +
Sbjct: 409 LVLSDELESLAPITGAKTGHLLNSDSAQTVASCGTGSRSSLRMLRHGLEVSEIV-TSELP 467
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
T WT R+ +D + +++L F+ T VL +G +V D+ G + T+A +
Sbjct: 468 GPPTNVWTTRLAETDEFDRYIILGFLNATLVLAIGETIVEVADT-GLLTNSPTIAIQQLD 526
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
L+QIH +R H G T W + G I+VSTSN
Sbjct: 527 SNGLLQIHPTGIRHI------HLDG------AITEW-----KVPPG----RKIVVSTSNR 565
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
+ ++G+ + ++E + L +L+ ++ E+++ + I+ +S S V
Sbjct: 566 RQV-VIGLSGGELIYFE------LDLDGQLN------EYQEQKEMGATITSLSLSEV--- 609
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVL 758
G IG +V+++S P VL + S+ + T+I CI + + +
Sbjct: 610 SKGRQRTPFLAIGLENLTVQIISLDPNS---VLETISLQALTAVPTSI--CIAELLDSSI 664
Query: 759 ---ADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSF 815
++ +V GL NG+LLR + ++ +T
Sbjct: 665 DKNSETLFVNIGLANGVLLR--------------TVLDSVNGQLTDTR------------ 698
Query: 816 ESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISF 875
TR +G PV L+ + +I LS R WL T ++ L + + +
Sbjct: 699 --------------TRFLGSRPVKLLRVKVDNKTSVIGLSSRTWLNYTFQNLLHFDPLIY 744
Query: 876 QPSTHATPVCSVECPKGILFVAENSLNL 903
+ + CP+G++ + +SL +
Sbjct: 745 DAIDNVHSFSAELCPEGLIGIVGSSLRI 772
>gi|237837399|ref|XP_002367997.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
gi|211965661|gb|EEB00857.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
gi|221488748|gb|EEE26962.1| splicing factor 3B subunit, putative [Toxoplasma gondii GT1]
gi|221509241|gb|EEE34810.1| splicing factor 3B subunit, putative [Toxoplasma gondii VEG]
Length = 1233
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L +Q+++PI D+ V+D Q++ CG P +LRI++ G+ +E++ +
Sbjct: 393 LALVDELQSLSPITDLKVLDAQGTGAPQVYVLCGKGPRSTLRILQHGLGVEEMADN-ELP 451
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
WT ++ + + ++ ++F + VL++G +VTDS F +V +L L+
Sbjct: 452 GRARAVWTTKLSHQNAFDGYIFVAFDGSSLVLQIGDTVEEVTDS-AFLTNVSSLLVALMY 510
Query: 579 DGLLVQIHQNAVR 591
D +Q+H+ +R
Sbjct: 511 DDSFIQVHETGIR 523
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPW 98
K + ++ G+ +P + +VV + +EL+ + G +Q++ VFG I+ +A
Sbjct: 11 KPTAIVHALQGNFSAPRAQEVVVSRGRVLELLRPDDQGKLQAISSTEVFGIIRSIAAF-- 68
Query: 99 NKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRML 158
+ N +D L + SDSG+L+ + F E + F V G R G L
Sbjct: 69 --RLTGAN-----RDYLAIGSDSGRLAIVQFSAEKNEFERVHCETYGKTGIRRVVPGEYL 121
Query: 159 AVDSSGCLIAVSAYE 173
AVD G + V+A E
Sbjct: 122 AVDPKGRTLMVAAVE 136
>gi|315053737|ref|XP_003176243.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
gi|311338089|gb|EFQ97291.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
Length = 1181
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++ SV + +E Q++ CG S R ++ G+ + +++ +
Sbjct: 409 ENLNLVES--IASLNPLMAASVTNVTEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D Y +++VLSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLSRNDQYDAYIVLSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI + ++
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADQRVNEWPA-----PQHRSIVAATTNERQVAIA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
S+ ++ S++ Y+ + ++ ++C+S+
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD----EKRQMSGTVTCLSL 608
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G VQ++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVQTLFSQDVFGIIRSLAA------FRLAGSN---KDYIIIGSDSGRITIVEYVPAQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGIRRVVPGQYLAVDPKGRACLIA 139
>gi|296803967|ref|XP_002842836.1| DNA damage-binding protein 1a [Arthroderma otae CBS 113480]
gi|238846186|gb|EEQ35848.1| DNA damage-binding protein 1a [Arthroderma otae CBS 113480]
Length = 1143
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 44/302 (14%)
Query: 393 KMVFCVDTGEFFMIEIAFGSDGH----KVHLSECLYKGPPCKALLWVEGRFLSAFVEMGD 448
+ + D G F + + D KV L L + L++++G + GD
Sbjct: 299 RWLLADDYGRLFFLMLVLDPDNAVEAWKVDL---LGQTSRASVLVYLDGGLVFVGSHQGD 355
Query: 449 GMVLKEENGRLVYTSPIQNIAPILDMSVVDYHD---EKRD------QMFACCGVAPEGSL 499
V++ G I NIAPILD +V+D D E R+ ++ G +GSL
Sbjct: 356 SQVIQIREGGFDLVQTIANIAPILDFTVMDLGDRSGEAREFSSGQTRIVTGSGAFGDGSL 415
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
R +RSG+ +E L A + + IT W +R +P+ L++SFV E+RV
Sbjct: 416 RSVRSGVGIEDLGVLASM-EHITDLWGLRAACPEPFSDTLLVSFVNESRVFHFSPEGDVE 474
Query: 560 TDSVGFRPDVCTLACGLVAD---GLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP 616
GF V + + L A+ ++Q+ +N ++ I L + T+W
Sbjct: 475 EKEEGFLGLVFSQSTLLAANLPGNRIIQVTENMAKI-----------IDLDSSM-TTWQS 522
Query: 617 EHVSISLGAVAHNMIIVSTSNPCFLFIL--GVRSL--SVSHYEIYEMQHMRLQSELSCIS 672
H + I +++N +L ++ G+R + S+S YE + +++S ++
Sbjct: 523 SH--------EDSAITSASANDDYLVLVFGGIRLICVSLSSYEEVGSKDFEADNQVSGMT 574
Query: 673 IP 674
IP
Sbjct: 575 IP 576
>gi|226293297|gb|EEH48717.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb18]
Length = 1208
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/457 (19%), Positives = 175/457 (38%), Gaps = 99/457 (21%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + ++ P++D + + ++ Q++ CG S R ++ G+ + +++ +
Sbjct: 409 ENVHLVEN--VNSLNPLMDCKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ D + ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTSKLTREDEFDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI + V+
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADRRVNEWPA-----PQHRSIVAATTNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
S+ ++ S++ Y+ E+R+ S ++ +S
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD-----------------------EKREMSGTVTCLSLGE 610
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV 754
V P G +G +V +LS P L + S+ + +A+S
Sbjct: 611 V---PKGRARSSFLAVGCDDSTVRILSLDPDS---TLGNKSVQALTSAPSALS------- 657
Query: 755 RLVLADQ------FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
+ +AD Y+ GL +G+ LR + ++ +T
Sbjct: 658 IMAMADSTSGGSTLYLHIGLYSGIYLR--------------TVLDEVTGELSDTR----- 698
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
TR +G+ PV L +S ++ALS RPWL + +
Sbjct: 699 ---------------------TRFLGLKPVKLFQVSVKEQKAVLALSSRPWLGYSDLQTK 737
Query: 869 AY--TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
A+ T + + S +C +G++ + +L +
Sbjct: 738 AFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRI 774
>gi|119471789|ref|XP_001258220.1| UV-damaged DNA binding protein, putative [Neosartorya fischeri NRRL
181]
gi|119406372|gb|EAW16323.1| UV-damaged DNA binding protein, putative [Neosartorya fischeri NRRL
181]
Length = 1140
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 135/308 (43%), Gaps = 35/308 (11%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFL 440
+WE + + + D G F + + SD +V + + G +A L+++ G L
Sbjct: 289 AWEQVDSR--RWLLADDYGRLFFLMLVLDSD-SQVESWKLDHLGNTSRASVLVYLGGGVL 345
Query: 441 SAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFA 489
GD VL+ NG L + NIAPILD +++D + + ++
Sbjct: 346 FLGSHQGDSQVLRISNGPLEVVQTLSNIAPILDFTIMDLGNRSSESQTHEFSSGQARIVT 405
Query: 490 CCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRV 549
G +G+LR +RSG+ +E+L + + IT W +++ + L+++FV+ETRV
Sbjct: 406 GSGAFDDGTLRSVRSGVGMEELGVLGDM-EHITDLWGLQVGSIGDFLDTLLVTFVDETRV 464
Query: 550 LRVGLN--FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH-SGGIPL 606
R + ++ +G TL + G ++Q+ + V ++A GG+
Sbjct: 465 FRFSSDGEVEEMDHFLGLSLSESTLLATNLPGGRILQVTEQRV------LIAEVEGGM-- 516
Query: 607 SYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQS 666
V W P + I A A++ IV + + +L + + +I + S
Sbjct: 517 ---VIYEWTPPNQLIITAASANDDSIVLVAGGELVTVLNI----TNEVQIVTQKDFGADS 569
Query: 667 ELSCISIP 674
++S +++P
Sbjct: 570 QISGVTVP 577
>gi|295666353|ref|XP_002793727.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278021|gb|EEH33587.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1209
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/457 (19%), Positives = 176/457 (38%), Gaps = 99/457 (21%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + + ++ P++D + + ++ Q++ CG S R ++ G+ + +++ +
Sbjct: 409 ENVHLVES--VNSLNPLMDCKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ D + ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTSKLTREDEFDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI + V+
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADRRVNEWPA-----PQHRSIVAATTNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
S+ ++ S++ Y+ E+R+ S ++ +S
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD-----------------------EKREMSGTVTCLSLGE 610
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV 754
V P G +G +V +LS P L + S+ + +A+S
Sbjct: 611 V---PKGRARSSFLAVGCDDSTVRILSLDPDS---TLGNKSVQALTSAPSALS------- 657
Query: 755 RLVLADQ------FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
+ +AD Y+ GL +G+ LR + ++ +T
Sbjct: 658 IMAMADSTSGGSTLYLHIGLYSGIYLR--------------TVLDEVTGELSDTR----- 698
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
TR +G+ PV L +S ++ALS RPWL + +
Sbjct: 699 ---------------------TRFLGLKPVKLFQVSVKEQKAVLALSSRPWLGYSDLQTK 737
Query: 869 AY--TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
A+ T + + S +C +G++ + +L +
Sbjct: 738 AFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRI 774
>gi|451852814|gb|EMD66108.1| hypothetical protein COCSADRAFT_34693 [Cochliobolus sativus ND90Pr]
Length = 1235
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 129/310 (41%), Gaps = 31/310 (10%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
++ PI+DM V + E Q++ G S R R+ + + L+ +P+ Q + WT
Sbjct: 410 SLNPIMDMEVANPALEDAPQIYTINGTGGRSSFRTTRNALEVLDLIE-SPLPQNASDVWT 468
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
++ D + +VL T VL++G + + +++ GF PD TL + ++QIH
Sbjct: 469 TKLTSEDETDTLIVLCLHSRTLVLKIGDDVEEASNT-GFLPDTNTLGVQQFGEDCIIQIH 527
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILG 645
+R + ++ T W P H +I A + + ++ S+ L+
Sbjct: 528 PKGIRHIQGIQFPNDDA-SATHASLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFEC 586
Query: 646 VRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIG 705
S++ E + + L+S ++C+++P +P G +
Sbjct: 587 DSDGSLAMAE----EEIVLESTINCLAMPD----------------------VPEGSVRA 620
Query: 706 YTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVL 765
+ +G +V + + P +L S S+ + + ++ + D QF +
Sbjct: 621 FFLAVGCSDQTVRIYNLSPDMEGNILRSISVQALTSPPSDLTINLMTDKSSRGYSQFLHI 680
Query: 766 AGLRNGMLLR 775
GLR+G+ +R
Sbjct: 681 -GLRSGVYIR 689
>gi|327309050|ref|XP_003239216.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
gi|326459472|gb|EGD84925.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
Length = 1209
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 180/459 (39%), Gaps = 103/459 (22%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++ S+ + +E Q++ CG S R ++ G+ + +++ +
Sbjct: 409 ENLNLVES--IASLNPLMAASIANITEEDAPQIYTLCGTGARSSFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D + +++VLSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLSRNDQFDAYIVLSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H S I+ +
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADQRVNEWPA-----PQHRS----------IVAA 563
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
TSN + I +LS +EM +E + E+R+ S ++ +S
Sbjct: 564 TSNERQVAI----ALSSGEIVYFEMDTDGSLAE---------YDEKRQMSGTVTCLSLGE 610
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGL-----RVLASGSIVLT-NTMGTAISG 748
V P G + +G +V +LS P L + L S L+ +M + SG
Sbjct: 611 V---PEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMIDSTSG 667
Query: 749 CIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
Y+ GL +G+ LR
Sbjct: 668 ----------GSTLYLHIGLYSGIYLR--------------------------------- 684
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWL----LQTA 864
DE+ L TR +G+ PV L +S ++ALS R WL +QT
Sbjct: 685 -------TVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRAVLALSSRSWLGYSDVQT- 736
Query: 865 RHSLAYTSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
S T +++ + S +C +G++ + +L +
Sbjct: 737 -KSFTLTPLNYVGLEWSWNFSSEQCVEGMVGIQGQNLRI 774
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G VQ++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVQTLFSQDVFGIIRSLAA------FRLAGS---SKDYIIIGSDSGRITIVEYVPAQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVVPGQYLAVDPKGRACLIA 139
>gi|225683909|gb|EEH22193.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb03]
Length = 1209
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/457 (19%), Positives = 175/457 (38%), Gaps = 99/457 (21%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + ++ P++D + + ++ Q++ CG S R ++ G+ + +++ +
Sbjct: 409 ENVHLVEN--VNSLNPLMDCKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ D + ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTSKLTREDEFDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI + V+
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADRRVNEWPA-----PQHRSIVAATTNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
S+ ++ S++ Y+ E+R+ S ++ +S
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD-----------------------EKREMSGTVTCLSLGE 610
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV 754
V P G +G +V +LS P L + S+ + +A+S
Sbjct: 611 V---PKGRARSSFLAVGCDDSTVRILSLDPDS---TLGNKSVQALTSAPSALS------- 657
Query: 755 RLVLADQ------FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSG 808
+ +AD Y+ GL +G+ LR + ++ +T
Sbjct: 658 IMAMADSTSGGSTLYLHIGLYSGIYLR--------------TVLDEVTGELSDTR----- 698
Query: 809 IAATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSL 868
TR +G+ PV L +S ++ALS RPWL + +
Sbjct: 699 ---------------------TRFLGLKPVKLFQVSVKEQKAVLALSSRPWLGYSDLQTK 737
Query: 869 AY--TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
A+ T + + S +C +G++ + +L +
Sbjct: 738 AFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRI 774
>gi|390342012|ref|XP_793599.3| PREDICTED: uncharacterized protein LOC588842 [Strongylocentrotus
purpuratus]
Length = 1161
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
Query: 446 MGDGMVLK-----EENGRLV-YTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD +++ +E+G V N+ PI+DM+VVD + + Q+ C G EGSL
Sbjct: 259 LGDSQLVRLNTESDESGSYVTMMETFTNLGPIVDMAVVDLDRQGQGQLVTCSGAYKEGSL 318
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRV 549
RIIR+GI + + + GI G W +++ ++ + LVLSFV +TRV
Sbjct: 319 RIIRNGIGIHE--HASIDLPGIKGIWPLKVDMNSQFDDTLVLSFVGQTRV 366
>gi|323508292|emb|CBQ68163.1| probable splicing factor 3B subunit 3 [Sporisorium reilianum SRZ2]
Length = 1221
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 171/452 (37%), Gaps = 90/452 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + ++ PILD ++ Q+FA CG S +++R G+ ++ + +
Sbjct: 412 LVQVDEMPSLDPILDAKPLNPLASDSPQIFAACGRGARSSFKMLRHGLEAQEAVSSD--L 469
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WT ++ D + S+++LSFV T VL +G +V+DS GF TLA +
Sbjct: 470 PGVPSAVWTTKITRQDEHDSYIILSFVNGTLVLSIGETIEEVSDS-GFLTSSSTLAVQQL 528
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHN---MIIVS 634
+ L+Q+H + +R + + P P ++ A N +++
Sbjct: 529 GEDALLQVHPHGIRHILVDKQINEWATP--------SLPNGRQTTIVATCTNERQVVVAF 580
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
+SN F EL ++ ER+ + + +S +
Sbjct: 581 SSNELVYF------------------------ELDMDGQLNEYQERKAMGAAVLTMSMAD 616
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV 754
P G +G +V ++S P L SI + A S C+ +
Sbjct: 617 C---PEGRQRTPYLAVGCDDSTVRIISLEPNSTL-----ASISIQALTAPASSICMAEMH 668
Query: 755 RLVLADQF---YVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAA 811
+ +V GL+NG+LLR + +V + F ++ +R
Sbjct: 669 DATIDRNHATTFVNIGLQNGVLLR-------TVLDAVTGQLTDTRTRFLGSKAVR----- 716
Query: 812 TSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYT 871
LI T+ G + V +ALS R WL T + L +
Sbjct: 717 ---------------LIRTKVHGQSAV-------------MALSTRTWLSFTYQDRLQFV 748
Query: 872 SISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+ F HA + CP+G++ + ++L +
Sbjct: 749 PLIFDALDHAWSFSAELCPEGLIGIVGSTLRI 780
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 49 GHLRSPTSNDVVFGKETSIELVI-IGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNS 107
G ++V K + +EL+ + G V++V FG ++ LA
Sbjct: 23 GQFSGTRQQEIVVAKGSRLELLRPDTQTGKVETVLSHDAFGVVRSLAAFRLTGG------ 76
Query: 108 QVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLI 167
KD L+V SDSG++ L + + + F V Q G+ R G+ LA D G
Sbjct: 77 ---SKDYLIVGSDSGRIVILEYQSRTNSFDKVHQETFGRSGSRRIVPGQYLATDPKGRAA 133
Query: 168 AVSAYE 173
+ A E
Sbjct: 134 MIGAME 139
>gi|336257679|ref|XP_003343663.1| hypothetical protein SMAC_08834 [Sordaria macrospora k-hell]
gi|380091896|emb|CCC10625.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1209
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 103/227 (45%), Gaps = 19/227 (8%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I ++ P +D V + + Q+++ CG + R ++ G+ + +++ + +
Sbjct: 414 LVLVESIDSMNPQVDCKVANLTGDDAPQIYSVCGNGARSTFRSLKHGLEVSEIV-ASELP 472
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WT ++ D Y +++VLSF T VL +G +V+DS GF TLA +
Sbjct: 473 GTPSAVWTTKLTKYDQYDAYIVLSFTNGTLVLSIGETVEEVSDS-GFLTTAPTLAVRQMG 531
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ L+Q+H +R + V +P P+H SI N ++++ S+
Sbjct: 532 EDGLIQVHPKGIRHIVQGRVNE-------WPA-----PQHRSIVAATANENQVVIALSSG 579
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
++ S++ Y+ + + ++ +S+ Q PE K SS
Sbjct: 580 EIVYFEMDSDGSLAEYD----EKKEMSGTVTSLSVGQV-PEGLKRSS 621
>gi|320037168|gb|EFW19106.1| pre-mRNA-splicing factor rse1 [Coccidioides posadasii str.
Silveira]
Length = 970
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 35/260 (13%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++ + + ++ Q + G + R ++ G+ + +++ +
Sbjct: 170 ENLNLVES--INSLNPLMSCKITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVES 227
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D Y ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 228 E-LPSVPSAVWTTKLTRNDQYDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 285
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI A + V+
Sbjct: 286 QQLGEDSLIQVHPKGIRHI------HADRRVNEWPA-----PQHRSIVAAATNERQVAVA 334
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS---------- 684
S+ ++ S++ Y+ + + ++C+S+ + P R +SS
Sbjct: 335 LSSGEIVYFEMDTDGSLAEYD----EKREMSGTVTCLSLGEIPPGRVRSSFLAVGCDDST 390
Query: 685 ------SPISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 391 VRILSLDPDSTLENKSVQAL 410
>gi|452002380|gb|EMD94838.1| hypothetical protein COCHEDRAFT_1128717 [Cochliobolus
heterostrophus C5]
Length = 1235
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 128/310 (41%), Gaps = 31/310 (10%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
++ PI+DM V + E Q++ G S R R+ + + L+ +P+ Q + WT
Sbjct: 410 SLNPIMDMEVANPALEDAPQIYTINGTGGRSSFRTTRNALEVLDLIE-SPLPQNASDVWT 468
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
++ D + +VL T VL++G + + +++ GF PD TL + ++QIH
Sbjct: 469 TKLTSEDETDTLIVLCLHSRTLVLKIGDDVEEASNT-GFLPDTNTLGVQQFGEDCIIQIH 527
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILG 645
+R + ++ T W P H +I A + + ++ S+ L+
Sbjct: 528 PKGIRHIQGIQFPNDDA-SATHASLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFEC 586
Query: 646 VRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIG 705
S++ E + + L S ++C+++P +P G +
Sbjct: 587 DSDGSLAMAE----EEIVLDSTINCLAMPD----------------------VPEGSVRA 620
Query: 706 YTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVL 765
+ +G +V + + P +L S S+ + + ++ + D QF +
Sbjct: 621 FFLAVGCSDQTVRIYNLSPDMEGNILRSISVQALTSPPSDLTVNLMTDKSSRGYSQFLHI 680
Query: 766 AGLRNGMLLR 775
GLR+G+ +R
Sbjct: 681 -GLRSGVYIR 689
>gi|256088964|ref|XP_002580590.1| DNA repair protein xp-E [Schistosoma mansoni]
Length = 1329
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 163/385 (42%), Gaps = 83/385 (21%)
Query: 446 MGDGMVLK-------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGS 498
+GD +++ E N + NI PI+DM +++ + ++Q+ C G EGS
Sbjct: 342 LGDSQLIRLNPDPDPERNSYITILETYTNIGPIVDMVLLE--TKGQNQLITCSGAYKEGS 399
Query: 499 LRIIRSGISLEKLLRTAPIYQG-ITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFT 557
LR+IR+GI + + A I Q I G W ++ SD + +V+S V +T++L + +
Sbjct: 400 LRVIRNGIGIHE---HATIDQDLIKGAWCFPIE-SDRFDDTIVVSMVGQTQLLHLADDDI 455
Query: 558 DVTDSVGFRPDVCTLACGLVA--------------------DGLLVQIHQNAVRLCMPTM 597
GF+ D T+ C ++ D LL+Q + +RL
Sbjct: 456 TALHLEGFKTDEQTVYCATLSPANDSPRPESMMIDENNNTLDPLLLQATTSGLRLIGIQS 515
Query: 598 VAHSGGIPLSYPVCTSWF-PEHVSIS-LGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYE 655
+ G + T W P IS L + H +++ S + L++L V S ++ +
Sbjct: 516 LCSKGCL-------TEWKPPTGRGISCLSSFRHTIVVASGTE---LYVLKVVGES-NNPK 564
Query: 656 IYEMQHMRLQSELSCI---------------SIPQKHPERRKSSSPISLVSNSSVPALPA 700
++ H ++ E++CI ++ H + SS+P + SVP L A
Sbjct: 565 FEQVSHRQMSHEVACIDLTPFNRDRAIAAINAVSSNHLDSTSSSTP-----DKSVPYLVA 619
Query: 701 -GVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLV-L 758
G+ +G+ + P++E++ P L T + + +P+ V + L
Sbjct: 620 VGLWLGHGLAL-LKLPNLELVHEEP-------------LPETTASTGTALLPRSVLIAQL 665
Query: 759 ADQFYVLAGLRNGMLLRFEWPPDSN 783
D Y+ A + +G L + P +
Sbjct: 666 EDIAYLFAAMGDGTLYFYTIDPSED 690
>gi|353232348|emb|CCD79703.1| putative dna repair protein xp-E [Schistosoma mansoni]
Length = 1329
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 163/385 (42%), Gaps = 83/385 (21%)
Query: 446 MGDGMVLK-------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGS 498
+GD +++ E N + NI PI+DM +++ + ++Q+ C G EGS
Sbjct: 342 LGDSQLIRLNPDPDPERNSYITILETYTNIGPIVDMVLLE--TKGQNQLITCSGAYKEGS 399
Query: 499 LRIIRSGISLEKLLRTAPIYQG-ITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFT 557
LR+IR+GI + + A I Q I G W ++ SD + +V+S V +T++L + +
Sbjct: 400 LRVIRNGIGIHE---HATIDQDLIKGAWCFPIE-SDRFDDTIVVSMVGQTQLLHLADDDI 455
Query: 558 DVTDSVGFRPDVCTLACGLVA--------------------DGLLVQIHQNAVRLCMPTM 597
GF+ D T+ C ++ D LL+Q + +RL
Sbjct: 456 TALHLEGFKTDEQTVYCATLSPANDSPRPESMMIDENNNTLDPLLLQATTSGLRLIGIQS 515
Query: 598 VAHSGGIPLSYPVCTSWF-PEHVSIS-LGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYE 655
+ G + T W P IS L + H +++ S + L++L V S ++ +
Sbjct: 516 LCSKGCL-------TEWKPPTGRGISCLSSFRHTIVVASGTE---LYVLKVVGES-NNPK 564
Query: 656 IYEMQHMRLQSELSCI---------------SIPQKHPERRKSSSPISLVSNSSVPALPA 700
++ H ++ E++CI ++ H + SS+P + SVP L A
Sbjct: 565 FEQVSHRQMSHEVACIDLTPFNRDRAIAAINAVSSNHLDSTSSSTP-----DKSVPYLVA 619
Query: 701 -GVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLV-L 758
G+ +G+ + P++E++ P L T + + +P+ V + L
Sbjct: 620 VGLWLGHGLAL-LKLPNLELVHEEP-------------LPETTASTGTALLPRSVLIAQL 665
Query: 759 ADQFYVLAGLRNGMLLRFEWPPDSN 783
D Y+ A + +G L + P +
Sbjct: 666 EDIAYLFAAMGDGTLYFYTIDPSED 690
>gi|392869416|gb|EJB11761.1| pre-mRNA-splicing factor rse1 [Coccidioides immitis RS]
Length = 1209
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 35/260 (13%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++ + + ++ Q + G + R ++ G+ + +++ +
Sbjct: 409 ENLNLVES--INSLNPLMSCKITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D Y ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRNDQYDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI A + V+
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADRRVNEWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS---------- 684
S+ ++ S++ Y+ + + ++C+S+ + P R +SS
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD----EKREMSGTVTCLSLGEVPPGRVRSSFLAVGCDDST 629
Query: 685 ------SPISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 630 VRILSLDPDSTLENKSVQAL 649
Score = 42.7 bits (99), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G ++++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKIRTLYSQDVFGIIRSLAA------FRLAGS---SKDYIIIGSDSGRIAIVEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGIRRVVPGQYLAVDPKGRACLIA 139
>gi|119173562|ref|XP_001239205.1| hypothetical protein CIMG_10227 [Coccidioides immitis RS]
Length = 1208
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 35/260 (13%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++ + + ++ Q + G + R ++ G+ + +++ +
Sbjct: 409 ENLNLVES--INSLNPLMSCKITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D Y ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRNDQYDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI A + V+
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADRRVNEWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS---------- 684
S+ ++ S++ Y+ + + ++C+S+ + P R +SS
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD----EKREMSGTVTCLSLGEVPPGRVRSSFLAVGCDDST 629
Query: 685 ------SPISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 630 VRILSLDPDSTLENKSVQAL 649
Score = 42.7 bits (99), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G ++++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKIRTLYSQDVFGIIRSLAA------FRLAGS---SKDYIIIGSDSGRIAIVEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGIRRVVPGQYLAVDPKGRACLIA 139
>gi|169599248|ref|XP_001793047.1| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
gi|160704565|gb|EAT90655.2| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
Length = 1246
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 128/310 (41%), Gaps = 31/310 (10%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
++ PI+ M + + E Q++ G + R R+ + + L+ + P+ Q + WT
Sbjct: 416 SLNPIMGMEIANPMLEDAPQIYTINGAGGRSTFRTTRNALEVLDLIES-PLPQNASDVWT 474
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
++ + D + +VL T VL++G + + +++ GF D TL + ++Q+H
Sbjct: 475 TKLTLEDETDTLIVLCLHSRTLVLKIGEDVEEASNT-GFMADTNTLGVQQFGEDCIIQVH 533
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFLFILG 645
+R G + ++ T W P H +I A + + ++ S+ L+
Sbjct: 534 PKGIRHIQGIQFPEDGAVA-THTSLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFEC 592
Query: 646 VRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIG 705
S++ E + + L S ++C++IP +P G +
Sbjct: 593 DADGSLAMAE----EEIALDSTINCLAIPD----------------------VPEGSVRA 626
Query: 706 YTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVL 765
+ +G +V + + P +L S S+ + + ++ + D QF +
Sbjct: 627 FFMAVGCSDQTVRIFNLSPDMEGNILRSISVQALTSPPSGLTINMMSDKSSRGYSQFLHI 686
Query: 766 AGLRNGMLLR 775
GLR+G+ +R
Sbjct: 687 -GLRSGVYIR 695
>gi|298713790|emb|CBJ27162.1| spliceosomal protein sap, putative [Ectocarpus siliculosus]
Length = 1256
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGI-TG 523
++++AP+ DM V D E QM+ CG +LRI+R G+++ +L G+ +
Sbjct: 410 VESLAPLTDMLVGDLAREDTPQMYTLCGRGNRSTLRILRHGLAVTELAEND--LPGVPSA 467
Query: 524 TWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLV 583
+ + +++D Y ++VLSF T VL V + +V +S GF TL L+A+ ++
Sbjct: 468 VFAFKERLTDDYDRYIVLSFTNATMVLEVQDSVEEVENS-GFLATSSTLDVKLMANNKIL 526
Query: 584 QIHQNAVRLCM 594
Q++ + +R+ M
Sbjct: 527 QVYSHGLRVIM 537
>gi|303324325|ref|XP_003072150.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111860|gb|EER30005.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 1209
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 35/260 (13%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++ + + ++ Q + G + R ++ G+ + +++ +
Sbjct: 409 ENLNLVES--INSLNPLMSCKITNLTEDDAPQFYTLSGTGARSTFRTLKHGLEVSEIVES 466
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ + WT ++ +D Y ++++LSF T VL +G +VTD+ GF TLA
Sbjct: 467 E-LPSVPSAVWTTKLTRNDQYDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSSAPTLAV 524
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI A + V+
Sbjct: 525 QQLGEDSLIQVHPKGIRHI------HADRRVNEWPA-----PQHRSIVAAATNERQVAVA 573
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS---------- 684
S+ ++ S++ Y+ + + ++C+S+ + P R +SS
Sbjct: 574 LSSGEIVYFEMDTDGSLAEYD----EKREMSGTVTCLSLGEVPPGRVRSSFLAVGCDDST 629
Query: 685 ------SPISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 630 VRILSLDPDSTLENKSVQAL 649
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G ++++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKIRTLYSQDVFGIIRSLAA------FRLAGS---SKDYIIIGSDSGRIAIVEYVPSQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGIRRVVPGQYLAVDPKGRACLIA 139
>gi|452838792|gb|EME40732.1| hypothetical protein DOTSEDRAFT_177898 [Dothistroma septosporum
NZE10]
Length = 1138
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 133/304 (43%), Gaps = 33/304 (10%)
Query: 393 KMVFCVDTGEFFMIEIAFGSDG-HKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMV 451
+ V D G+ +++ + +G + H + L + L++++G + GD +
Sbjct: 298 RYVLADDYGKLYLLMVQQNREGEYHGHQIDILGETSRASTLVYLDGGRVFVGSHQGDSQI 357
Query: 452 LK--EENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFACCGVAPEGS 498
++ E++ ++ T P NIAPILD +V+D + D ++ G +GS
Sbjct: 358 IQISEQSIEVLQTFP--NIAPILDFTVMDMGNRSSDAPVNEFSSGQARIVTGSGAFKDGS 415
Query: 499 LRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTD 558
LR +RSG+ LE + I+ +++R + LV+SFV++TRV V D
Sbjct: 416 LRSVRSGVGLEDRGDLGSLGAPISEVFSLRSSAAAKLVDTLVVSFVDQTRVF-VFDQEGD 474
Query: 559 VTDS---VGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF 615
V + GF TL G + DG +VQ+ ++ L A SG I ++
Sbjct: 475 VEERDEFRGFSLSDATLFAGNLPDGRVVQVSSTSILLAD----AESGMITDTWAA----- 525
Query: 616 PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQ 675
P +I+ A + +++S S + + LS + + E+SCI++
Sbjct: 526 PGGANITAVAADRSKLLLSLSGKALVAL----DLSGESIAVQARREFSSTEEVSCIALSA 581
Query: 676 KHPE 679
P+
Sbjct: 582 SIPD 585
>gi|443922899|gb|ELU42250.1| splicing factor 3B subunit 3 [Rhizoctonia solani AG-1 IA]
Length = 1212
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 486 QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGI-TGTWTVRMKVSDPYHSFLVLSFV 544
Q + CG S R++R G+ +E+ + + G+ G WTV++ D Y +++LSFV
Sbjct: 459 QFYLACGRGARSSFRMLRHGLEVEESVSSE--LPGVPNGVWTVKVNDGDQYDKYIILSFV 516
Query: 545 EETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVAD-GLLVQIHQNAVRLCMPTM--VAHS 601
T VL +G +V D+ GF TLA +AD G L+Q+H VR P+ +A +
Sbjct: 517 NGTLVLSIGETIEEVADT-GFLSSAPTLAVQQLADNGGLIQVHPGGVRHVRPSQGDLAST 575
Query: 602 GGI 604
G+
Sbjct: 576 AGV 578
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 41 SVVLQVAHGHLRSPTSNDVVFGKETSIELVI-IGEDGIVQSVCEQAVFGTIKDLAVVPWN 99
+ + Q G+ +++ + T +EL+ G V +V Q VFGTI+ +A
Sbjct: 12 TAITQAIVGNFSGIRQQEIIISRGTILELLRPDSSTGKVSTVLAQDVFGTIRSIAA---- 67
Query: 100 KKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLA 159
F KD +V SDSG++ L + + + F + Q G+ R G MLA
Sbjct: 68 --FRLTGGT---KDYCIVGSDSGRIIVLEYDPKTNSFTKLQQETFGKSGSRRIVPGEMLA 122
Query: 160 VDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
VD G + +SA E ++ L+ + +++
Sbjct: 123 VDPKGRSVMISAVEKSKLVYVLNRDAAANL 152
>gi|342888540|gb|EGU87812.1| hypothetical protein FOXB_01669 [Fusarium oxysporum Fo5176]
Length = 1408
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
I +++P+LD V D E Q+++ G +++ G+ + K+ ++ + ++G
Sbjct: 758 IDSLSPLLDCEVADPTGEGPPQIYSESGNGARSHFWMLKHGLEINKVA-SSDLPGTVSGV 816
Query: 525 WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
WT RM D + S+++L+ + T V+ VG V+DS GF V TLA + D +VQ
Sbjct: 817 WTTRMTRHDKFDSYIILTSSDGTVVMSVGDEVEQVSDS-GFLTTVTTLAIQQIGDDGIVQ 875
Query: 585 IHQNAVR 591
IH +R
Sbjct: 876 IHSKGIR 882
>gi|308808936|ref|XP_003081778.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
gi|116060244|emb|CAL56303.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
Length = 1282
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 16/143 (11%)
Query: 447 GDGMVLK--------EENGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAP 495
GD ++K +++G L Y ++ N+ PI+D + VD + Q+ C G
Sbjct: 552 GDSQLIKLHSEKTNVDKDGNLSYIQILEEFTNLGPIVDFAFVDLERHGQGQVVTCSGAYK 611
Query: 496 EGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN 555
+GSLR++R+GI +++ + G+ G +++R +LV++F+ ETR+L +
Sbjct: 612 DGSLRVVRNGIGIDE--QAVIQLPGVKGLFSLRDDDESQVDKYLVVTFINETRILGFVGD 669
Query: 556 FTDVTDSV---GFRPDVCTLACG 575
D D GF + TL CG
Sbjct: 670 EGDTLDETEISGFNAEAQTLCCG 692
>gi|396465264|ref|XP_003837240.1| similar to DDB1B (Damaged DNA Binding Protein 1 B); damaged DNA
binding / protein binding [Leptosphaeria maculans JN3]
gi|312213798|emb|CBX93800.1| similar to DDB1B (Damaged DNA Binding Protein 1 B); damaged DNA
binding / protein binding [Leptosphaeria maculans JN3]
Length = 1089
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 144/331 (43%), Gaps = 45/331 (13%)
Query: 366 DSDSGNAK-EPSKHVCSW-SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECL 423
D +SG + EP + + +WE + + V D G +M + + HKV +
Sbjct: 195 DDESGELQTEPLEEATIFVAWERIDAQ--RFVLADDYGRLYMFMLILDAR-HKVRSWKLD 251
Query: 424 YKGPPCKA--LLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY-- 479
G +A L++++ ++ GD V+K + NIAPILD +++D
Sbjct: 252 IIGKTSRASVLVYLDAGYVFVGSHQGDSQVIKIAERSMEIVQTFSNIAPILDFTIMDMGN 311
Query: 480 ---------HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMK 530
+ + ++ G +GSLR +RSG+ LE L + + I+ ++++
Sbjct: 312 RSGEGQTNEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDLGVLGEM-EHISNLFSLKSD 370
Query: 531 VSDPYHSFLVLSFVEETRVLRVG--LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQN 588
+ Y L+++FV E+RV + +V + + TL ++ G +VQ+
Sbjct: 371 ATAQYADTLLVTFVNESRVFKFDPQGEVEEVEEFASLALEETTLVAANISQGRVVQVTSG 430
Query: 589 AVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFI-LG-- 645
R+C GG+ + + W P + I +++N + I LG
Sbjct: 431 RARIC-----DLDGGM-----IVSEWMP---------MGDQTITAASANDTHVLISLGGV 471
Query: 646 -VRSLSVSH-YEIYEMQHMRLQSELSCISIP 674
V SL+++ ++ + + +S+++C+++P
Sbjct: 472 TVVSLNMTDGLQVAQQKTFGTESQVACVALP 502
>gi|358366432|dbj|GAA83053.1| UV-damaged DNA binding protein [Aspergillus kawachii IFO 4308]
Length = 1643
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 134/308 (43%), Gaps = 35/308 (11%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFL 440
+WE + + + D G F + + S+ ++V + + G +A L+++ G +
Sbjct: 229 AWEQVDSQ--RWLLADDYGRLFFLMLVLDSN-NQVQSWKLDHLGNTARASVLIYLGGGVI 285
Query: 441 SAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFA 489
GD VL+ NG L + NIAPILD +++D + + ++
Sbjct: 286 FVGSHQGDSQVLRIGNGSLEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVT 345
Query: 490 CCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRV 549
G +G+LR +RSG+ +E+L + + IT + +++ Y L+++FV+ETRV
Sbjct: 346 GSGAFDDGTLRSVRSGVGMEELGVLGEM-ELITDLFGLQLATKGGYLDTLLVTFVDETRV 404
Query: 550 LRVGLN--FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAH-SGGIPL 606
+ + ++ +G TL + G ++Q+ + V ++A GG+
Sbjct: 405 FQFNFDGEVEELDSFLGLSLSENTLLAMNLPGGRILQVTEQRV------LIADIEGGM-- 456
Query: 607 SYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQS 666
V W P + A A+N IV S L +L + + + + S
Sbjct: 457 ---VTNEWTPPDRLVITSASANNDSIVLVSGGQILTVLDIN----NDVRVVAQKDFGADS 509
Query: 667 ELSCISIP 674
++S +++P
Sbjct: 510 QISGVTVP 517
>gi|134077422|emb|CAK45676.1| unnamed protein product [Aspergillus niger]
Length = 1133
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 146/340 (42%), Gaps = 37/340 (10%)
Query: 353 ALLELRDYDPMCIDSDSGN--AKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAF 410
LL L + +D+DS ++ + +WE + + + D G F + +
Sbjct: 241 GLLVLGETSIKYVDTDSNEIVSRPLDEATIFVAWEQVDSQ--RWLLADDYGRLFFLMLVL 298
Query: 411 GSDGHKVHLSECLYKGPPCKA--LLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNI 468
S+ ++V + + G +A L+++ G + GD VL+ NG L + NI
Sbjct: 299 DSN-NQVQSWKLDHLGNTARASVLIYLGGGVIFVGSHQGDSQVLRIGNGSLEVIQTLSNI 357
Query: 469 APILDMSVVDYHDEKRD-----------QMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
APILD +++D + + ++ G +G+LR +RSG+ +E+L +
Sbjct: 358 APILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGEM 417
Query: 518 YQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDVCTLACG 575
+ IT + +++ Y L+++FV+ETRV + + ++ +G TL
Sbjct: 418 -ELITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGEVEELDSFLGLSLSENTLLAM 476
Query: 576 LVADGLLVQIHQNAVRLCMPTMVAH-SGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ G ++Q+ + V ++A GG+ V W P + A A+N IV
Sbjct: 477 NLPGGRILQVTEQRV------LIADIEGGM-----VTNEWTPPDNLVITSASANNDSIVL 525
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIP 674
S + +L + + + + S++S +++P
Sbjct: 526 VSGGQLMTVLDIN----NDVRVISQKDFGADSQISGVTVP 561
>gi|317031116|ref|XP_001392900.2| UV-damaged DNA binding protein [Aspergillus niger CBS 513.88]
Length = 1124
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 146/340 (42%), Gaps = 37/340 (10%)
Query: 353 ALLELRDYDPMCIDSDSGN--AKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAF 410
LL L + +D+DS ++ + +WE + + + D G F + +
Sbjct: 241 GLLVLGETSIKYVDTDSNEIVSRPLDEATIFVAWEQVDSQ--RWLLADDYGRLFFLMLVL 298
Query: 411 GSDGHKVHLSECLYKGPPCKA--LLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNI 468
S+ ++V + + G +A L+++ G + GD VL+ NG L + NI
Sbjct: 299 DSN-NQVQSWKLDHLGNTARASVLIYLGGGVIFVGSHQGDSQVLRIGNGSLEVIQTLSNI 357
Query: 469 APILDMSVVDYHDEKRD-----------QMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
APILD +++D + + ++ G +G+LR +RSG+ +E+L +
Sbjct: 358 APILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGEM 417
Query: 518 YQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDVCTLACG 575
+ IT + +++ Y L+++FV+ETRV + + ++ +G TL
Sbjct: 418 -ELITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGEVEELDSFLGLSLSENTLLAM 476
Query: 576 LVADGLLVQIHQNAVRLCMPTMVAH-SGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ G ++Q+ + V ++A GG+ V W P + A A+N IV
Sbjct: 477 NLPGGRILQVTEQRV------LIADIEGGM-----VTNEWTPPDNLVITSASANNDSIVL 525
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIP 674
S + +L + + + + S++S +++P
Sbjct: 526 VSGGQLMTVLDIN----NDVRVISQKDFGADSQISGVTVP 561
>gi|350629921|gb|EHA18294.1| damage-specific DNA binding protein [Aspergillus niger ATCC 1015]
Length = 1140
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 146/340 (42%), Gaps = 37/340 (10%)
Query: 353 ALLELRDYDPMCIDSDSGN--AKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAF 410
LL L + +D+DS ++ + +WE + + + D G F + +
Sbjct: 257 GLLVLGETSIKYVDTDSNEIVSRPLDEATIFVAWEQVDSQ--RWLLADDYGRLFFLMLVL 314
Query: 411 GSDGHKVHLSECLYKGPPCKA--LLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNI 468
S+ ++V + + G +A L+++ G + GD VL+ NG L + NI
Sbjct: 315 DSN-NQVQSWKLDHLGNTARASVLIYLGGGVIFVGSHQGDSQVLRIGNGSLEVIQTLSNI 373
Query: 469 APILDMSVVDYHDEKRD-----------QMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
APILD +++D + + ++ G +G+LR +RSG+ +E+L +
Sbjct: 374 APILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGEM 433
Query: 518 YQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDVCTLACG 575
+ IT + +++ Y L+++FV+ETRV + + ++ +G TL
Sbjct: 434 -ELITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGEVEELDSFLGLSLSENTLLAM 492
Query: 576 LVADGLLVQIHQNAVRLCMPTMVAH-SGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ G ++Q+ + V ++A GG+ V W P + A A+N IV
Sbjct: 493 NLPGGRILQVTEQRV------LIADIEGGM-----VTNEWTPPDNLVITSASANNDSIVL 541
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIP 674
S + +L + + + + S++S +++P
Sbjct: 542 VSGGQLMTVLDIN----NDVRVISQKDFGADSQISGVTVP 577
>gi|189208368|ref|XP_001940517.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976610|gb|EDU43236.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1247
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 134/321 (41%), Gaps = 34/321 (10%)
Query: 459 LVYTSPIQN---IAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTA 515
LV +P+++ + PI+ M V + E Q++ G + S R R+ + + L+ +
Sbjct: 399 LVNFTPVESMPSLNPIMGMEVANPALEDAPQVYTINGTSGRSSFRTTRNALEVLDLIES- 457
Query: 516 PIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG 575
P+ Q + WT ++ D + +VL T VL++G + + +++ GF PD TL
Sbjct: 458 PLPQNASDVWTTKLTSGDEADTLIVLCLHSRTLVLKIGDDVEEASNT-GFLPDTNTLGVQ 516
Query: 576 LVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVS 634
+ ++QIH +R + ++ W P H +I A + + ++
Sbjct: 517 QFGEDCIIQIHPKGIRHIQGIQFPNDDA-DATHANLMDWHPPAHRTIVACATNNRQVAIA 575
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
S+ L+ S++ E + + L S ++C+++P
Sbjct: 576 LSSGQILYFECDSDGSLAMAE----EEISLDSTINCLAMPD------------------- 612
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV 754
+P G + + +G +V + + P +L S S+ + + ++ +D
Sbjct: 613 ---VPEGSVRAFFLAVGCSDQTVRIFNLSPDMDGNILRSISVQALTSPPSDLTINFMKD- 668
Query: 755 RLVLADQFYVLAGLRNGMLLR 775
R + ++ GLR+G+ +R
Sbjct: 669 RSPRGESQFLHIGLRSGVYIR 689
>gi|440907208|gb|ELR57379.1| Splicing factor 3B subunit 3 [Bos grunniens mutus]
Length = 1133
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 153/388 (39%), Gaps = 91/388 (23%)
Query: 525 WTVRMKVS-DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLV 583
W V++ ++ D + +++++SFV T VL +G +VTDS GF TL+C L+ D LV
Sbjct: 357 WLVKVLITTDEFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCSLLGDDALV 415
Query: 584 QIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFI 643
Q++ + +R I V P +I AV ++++ + ++
Sbjct: 416 QVYPDGIR-----------HIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYF 464
Query: 644 LGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP-ERRKSSSPISLVSNSSVPALPAGV 702
S ++ Y + + +++ C+S+ P E+R + LV N
Sbjct: 465 EMDPSGQLNEY----TERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDN---------- 510
Query: 703 IIGYTFVIGTHRPSVEVLSFVPKEGLRVLASG-------SIVLTNTMGTAISGCIPQDVR 755
+V ++S P + L+ L+ S+ + GT + +
Sbjct: 511 -------------TVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGS 557
Query: 756 LVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSF 815
+ Y+ GL+NG+LLR + P++ +T
Sbjct: 558 IGF---LYLNIGLQNGVLLR--------------TVLDPVTGDLSDTR------------ 588
Query: 816 ESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISF 875
TR +G PV L + ++A+S R WL + + T +S+
Sbjct: 589 --------------TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSY 634
Query: 876 QPSTHATPVCSVECPKGILFVAENSLNL 903
+ A+ S +CP+GI+ ++ N+L +
Sbjct: 635 ETLEFASGFASEQCPEGIVAISTNTLRI 662
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAF---------- 68
Query: 107 SQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
++ G KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 69 -RLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKG 127
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 128 RAVMISAIEKQKLVYILNRDAAARL 152
>gi|388855100|emb|CCF51231.1| probable splicing factor 3B subunit 3 [Ustilago hordei]
Length = 1221
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 172/453 (37%), Gaps = 92/453 (20%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + ++ PILD ++ Q+F CG S +++R G+ ++ + +
Sbjct: 412 LVQVDEMPSLDPILDAKPLNPLASDSPQIFVACGRGARSSFKMLRHGLEAQEAVSSD--L 469
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ + WT ++ D Y S+++LSF+ T VL +G +V DS GF TLA +
Sbjct: 470 PGVPSAVWTTKITRQDEYDSYIILSFLNGTLVLSIGETIEEVGDS-GFLTSSPTLAVQQL 528
Query: 578 ADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHN---MIIVS 634
+ L+Q+H +R + + P P V ++ A+ N + +
Sbjct: 529 GEDALLQVHPYGIRHILVDKQVNEWATP--------SLPNGVQTTIVAICTNERQVAVAL 580
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSS 694
+SN F L + ++ E Q + PE R+ +
Sbjct: 581 SSNELVYFELDMDG------QLNEYQDRKATGATVLTMSMADCPEGRQRT---------- 624
Query: 695 VPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDV 754
P L AG +V ++S P L SI + A S C+ + +
Sbjct: 625 -PYLAAGC----------DDSTVRIISLEPASTL-----ASISIQALTAPASSICVAE-M 667
Query: 755 RLVLADQ----FYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIA 810
+ D+ +V GL NG+LLR + ++ +T G
Sbjct: 668 KDATVDRNQATTFVNIGLSNGVLLR--------------TVLDAMTGQLTDTRTRFLGSK 713
Query: 811 ATSSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAY 870
A ++LI T+ G + V +ALS R WL T + L +
Sbjct: 714 A-------------VRLIRTKVHGQSAV-------------MALSTRTWLSFTYQSRLQF 747
Query: 871 TSISFQPSTHATPVCSVECPKGILFVAENSLNL 903
T + F HA + CP+G++ + ++L +
Sbjct: 748 TPLIFDALDHAWSFSAELCPEGLIGIVGSTLRI 780
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 49 GHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNS 107
G ++V K + +EL+ G V++V Q FG ++ LA
Sbjct: 23 GQFSGTRQQEIVVAKGSRLELLRPDTSTGKVETVLSQDAFGVVRSLAAFRLTGG------ 76
Query: 108 QVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLI 167
KD L+V SDSG++ L F + + F V Q G+ R G+ LA D G
Sbjct: 77 ---SKDYLIVGSDSGRIVILEFQPQTNSFDKVHQETFGRSGSRRIVPGQYLATDPKGRAT 133
Query: 168 AVSAYE 173
+ A E
Sbjct: 134 MIGAME 139
>gi|296411833|ref|XP_002835634.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629420|emb|CAZ79791.1| unnamed protein product [Tuber melanosporum]
Length = 1053
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQM-----------FACCGVAPEGSLRIIRSGISLEKLLR 513
++NI PI+D V+D + D++ + G +G LR IRSG+ L L
Sbjct: 360 LRNIGPIVDFRVMDLDYSRSDEVMRQYSPGHIRFLSASGGHTQGHLRTIRSGVGLYDLGF 419
Query: 514 TAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRV--GLNFTDVTDSVGFRPDVCT 571
+ GI G W++R + LV+SF+EETR+ + ++ + +GF + T
Sbjct: 420 LGEM-SGIRGLWSLRSIPGSSFDDVLVVSFIEETRIFKFDNSGEIEELYEFMGFALNQRT 478
Query: 572 LACGLVADGLLVQIHQNAVRLC---MPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAH 628
+ V G +Q+ AV+L T++A SYP + ++I++ +
Sbjct: 479 ILAHSVVGGRFLQVTATAVKLVDVRSNTLIAE------SYP------DKSLTITIASANQ 526
Query: 629 NMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMR--LQSELSCISIP 674
+++I + P + + R L +H+R ++E+SC+++P
Sbjct: 527 DLLIYAM-GPTLVLLNLARDLE---------EHIRTTFENEISCLNMP 564
>gi|398391687|ref|XP_003849303.1| hypothetical protein MYCGRDRAFT_87400 [Zymoseptoria tritici IPO323]
gi|339469180|gb|EGP84279.1| hypothetical protein MYCGRDRAFT_87400 [Zymoseptoria tritici IPO323]
Length = 1143
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 33/298 (11%)
Query: 393 KMVFCVDTGEFFMIEIAFGSDG-HKVHLSECLYKGPPCKALLWV-EGRFLSAFVEMGDGM 450
+ D G+ +++ I S+G + H + L + L+++ EGR GD
Sbjct: 300 RYALADDYGKLYLLMIQQTSNGEYSSHQIDILGETSRASTLVYLDEGRVFVG-SHQGDSQ 358
Query: 451 VLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFACCGVAPEGSL 499
+++ ++ NIAPILD +V+D + D ++ G +GSL
Sbjct: 359 IIQILPQKIEVLQTFPNIAPILDFAVMDMGNRSSDAPVNEFSSGQARIVTGSGAFKDGSL 418
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
R +RSG+ LE + I+ + +R + + + LV+SFV TRV V DV
Sbjct: 419 RSVRSGVGLEDRGDLGSLDAPISSLFALRSRPAPAVVNTLVVSFVSHTRVF-VFTAEGDV 477
Query: 560 TDSV---GFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-F 615
+ GF TL G +ADG ++QI ++V + G + V W
Sbjct: 478 EEQEQYRGFELGESTLHAGNLADGRVIQITNSSV-----VLADQEGDM-----VTDRWQS 527
Query: 616 PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
P SI+ + N I+VS L V +S S +++ + ++SCI++
Sbjct: 528 PSGTSITAVSANGNNILVSLKGASLL----VLDVSGSTIKVHAQREFGSDEQVSCIAL 581
>gi|361131929|gb|EHL03544.1| putative Pre-mRNA-splicing factor rse1 [Glarea lozoyensis 74030]
Length = 967
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 39/264 (14%)
Query: 453 KEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLL 512
+ EN LV + I ++ P++D V + + Q+++ CG + R ++ G+ + +++
Sbjct: 221 QAENLSLVES--IDSMNPLMDCKVANLTNADAPQIYSICGTGARSTFRSLKHGLEVSEIV 278
Query: 513 RTAPIYQGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCT 571
+ G+ + WT ++ D Y ++++LSF T VL +G +VTD+ GF T
Sbjct: 279 ESE--LPGVPSAVWTTKLTQGDTYDAYIILSFSNGTLVLSIGETVEEVTDT-GFLSTAST 335
Query: 572 LACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMI 631
LA + + L+Q+H +R I V P+H SI +
Sbjct: 336 LAVQQLGEDGLIQVHPKGIR-----------HIRADRRVNEWAAPQHRSIVAATTNERQV 384
Query: 632 IVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSS------- 684
V+ S+ ++ S++ Y+ + + ++C+S+ PE R S
Sbjct: 385 AVALSSGEIVYFEMDSDGSLAEYD----EKKEMSGTVTCLSLGDV-PEGRVRSPYLAVGC 439
Query: 685 ----------SPISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 440 DDSTVRILSLDPDSTLENKSVQAL 463
>gi|254572247|ref|XP_002493233.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
gi|238033031|emb|CAY71054.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
gi|328352752|emb|CCA39150.1| Pre-mRNA-splicing factor rse1 [Komagataella pastoris CBS 7435]
Length = 1179
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 170/399 (42%), Gaps = 69/399 (17%)
Query: 399 DTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGD---GMVLKEE 455
DT E IEI + D V L ++K A ++L F ++GD G + E
Sbjct: 318 DTKEVSSIEIKY-FDSLPVCLDLHIFKSGFLFADTETGDKYLYQFEKLGDDDDGTIWSSE 376
Query: 456 N---GRLVY--------TSPIQNIAPILDMSVVD-----YHDEKRDQMFACCGVAPEGSL 499
N VY T + N++ + + ++ D+++ Q+ G + SL
Sbjct: 377 NYPDEESVYEDHHIYFDTKELDNLSLVYILDCLNPITDGLLDQEKSQLVLTSGGSSRSSL 436
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDV 559
++++ +++ +L ++ + +T ++ D Y ++V+SF++ T VL +G + +V
Sbjct: 437 KLLKHELAINEL-ASSELPGSALNIFTTKVSHKDQYDKYMVISFIDGTLVLSIGESVDEV 495
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHV 619
+DS G V T+A V L Q+H + + H G+ + W P
Sbjct: 496 SDS-GLELQVSTIAVQQVGRNSLAQVHSHG--------IVHLKGLNEPSFEKSLWQP--- 543
Query: 620 SISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPE 679
V +++ S +N LG+ + + ++EI E + +H E
Sbjct: 544 -----PVGAEILVASMTNS--QIALGLSNRELVYFEIDEYDQLI------------EHKE 584
Query: 680 RRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLT 739
R++ S IS + S+ +P G + +G + ++++LS P L VL+ ++
Sbjct: 585 RKEMSGRISAL---SLGQIPDGRLRSPFLAVGCNDMTIKILSTDPNSCLEVLSLQAL--- 638
Query: 740 NTMGTAISGCIPQDVRLVLADQ---FYVLAGLRNGMLLR 775
IP D+++ +Q ++V GL +G+ +R
Sbjct: 639 --------SSIPSDLQITNLEQGAGYFVHIGLDSGIYIR 669
>gi|384249029|gb|EIE22512.1| hypothetical protein COCSUDRAFT_83469 [Coccomyxa subellipsoidea
C-169]
Length = 822
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%)
Query: 497 GSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNF 556
G+L ++ L+ LL + P YQG+TG W++ + S + +V+SF +R + G
Sbjct: 36 GALHVLHGTQVLDMLLMSPPEYQGVTGLWSIPVSPSVATSALVVISFTSGSRAMAAGSTL 95
Query: 557 TDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLC 593
+DVT+++G D TL G +A+ L Q+ V LC
Sbjct: 96 SDVTETIGLDADSQTLEAGSIANLLSAQVTSKGVILC 132
>gi|396488712|ref|XP_003842924.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
gi|312219502|emb|CBX99445.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
Length = 1236
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 131/314 (41%), Gaps = 39/314 (12%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
++ PI+ M V + E Q++ G S R R+ + + L+ + P+ Q + WT
Sbjct: 416 SLNPIMGMEVANPALEDAPQIYTINGTGGRSSFRSTRNALEVLDLIES-PLPQNASDVWT 474
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
++ D + +VL T VL++G + + +++ GF PD TL + ++QIH
Sbjct: 475 TKLTSDDETDTLIVLCLHSRTLVLKIGDDVEEASNT-GFLPDTNTLGVQQFGEDCIIQIH 533
Query: 587 QNAVR----LCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNPCFL 641
+R + P A++ ++ T W P H +I A + + ++ S+ L
Sbjct: 534 PKGIRHIQGIQFPDNDANA-----THQSLTDWQPPAHRTIVACATNNRQVAIALSSGQIL 588
Query: 642 FILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAG 701
+ S++ E + + L S ++C+++P +P G
Sbjct: 589 YFECDSDGSLAMAE----EEIALDSTINCLAMPD----------------------VPEG 622
Query: 702 VIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQ 761
+ + +G +V + + P +L S S+ + + ++ + D Q
Sbjct: 623 SVRAFFLAVGCSDQTVRIFNLSPDMEGNILRSISVQALTSPPSDLTINLMSDKSPRGYSQ 682
Query: 762 FYVLAGLRNGMLLR 775
F + GLR+G+ +R
Sbjct: 683 FLHI-GLRSGVYIR 695
>gi|169611218|ref|XP_001799027.1| hypothetical protein SNOG_08717 [Phaeosphaeria nodorum SN15]
gi|160702249|gb|EAT83885.2| hypothetical protein SNOG_08717 [Phaeosphaeria nodorum SN15]
Length = 1140
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 130/298 (43%), Gaps = 34/298 (11%)
Query: 393 KMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFLSAFVEMGDGM 450
+ V D G ++ + + KV + G +A L++++ ++ GD
Sbjct: 306 RFVLADDYGRLYLFMLIL-DEKKKVQSWKLDIIGQTSRASVLVYLDAGYVFVGSHQGDSQ 364
Query: 451 VLKEENGRLVYTSPIQNIAPILDMSVVDY-----------HDEKRDQMFACCGVAPEGSL 499
V++ + NIAP+LD +++D + + ++ G +GSL
Sbjct: 365 VIRITEQSMEIVQTFANIAPVLDFTIMDMGNRSGEGQTNEYSSGQARIVTGSGAYQDGSL 424
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG--LNFT 557
R +RSG+ LE L + + I+ + ++ S Y L+++FV ETR+ R
Sbjct: 425 RSVRSGVGLEDLGVLGEM-EHISDLFGLKSNASAEYADTLLVTFVNETRIFRFDPQGEVE 483
Query: 558 DVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-P 616
+V + D TLA ++ G +VQ+ VR+ GG+ + + W P
Sbjct: 484 EVDEFASVALDETTLAAANISQGRVVQVTGGRVRVS-----DLDGGM-----ITSEWVPP 533
Query: 617 EHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIP 674
+I+ +V + +++S + V +L++ ++ + ++S+++CI++P
Sbjct: 534 SGETITAASVNDSHVLLSLGG------VSVITLNMDGLKVLTEKKFGVESQVACIALP 585
>gi|330932624|ref|XP_003303845.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
gi|311319874|gb|EFQ88052.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
Length = 1247
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/447 (19%), Positives = 173/447 (38%), Gaps = 88/447 (19%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
++ PI+ M V + E Q++ G + S R R+ + + L+ + P+ Q + WT
Sbjct: 410 SLNPIMGMEVANPALEDAPQVYTINGTSGRSSFRTTRNALEVLDLIES-PLPQNASDVWT 468
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
++ D + +VL T VL++G + + +++ GF PD TL + ++QIH
Sbjct: 469 TKLTSEDEADTLIVLCLHSRTLVLKIGDDVEEASNT-GFLPDTNTLGVQQFGEDCIIQIH 527
Query: 587 QNAVRLCMPTMVAHSGGIPL-------SYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNP 638
+R H GI ++ W P H +I A + + ++ S+
Sbjct: 528 PKGIR--------HIQGIQFPNDDAGATHANLMDWHPPAHRTIVACATNNRQVAIALSSG 579
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
L+ S++ E + + L S ++C+++P +
Sbjct: 580 QILYFECDSDGSLAMAE----EEISLDSTINCLAMPD----------------------V 613
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVL 758
P G + + +G +V + + P +L S S+ + + ++ + D
Sbjct: 614 PEGSVRAFFLAVGCSDQTVRIFNLSPDMDGNILRSISVQALTSPPSDLTINLMTDRSPRG 673
Query: 759 ADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESK 818
QF + GLR+G+ +R SV
Sbjct: 674 YSQFLHI-GLRSGVYIR-----------SVL----------------------------- 692
Query: 819 DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHS--LAYTSISFQ 876
DE+ ++ R +G P+ ++ + + ++A++ RPWL T + L T +++
Sbjct: 693 DEMTGDIGDTRRRFLGPEPIKFAKVTVAGEPGILAMTSRPWLGYTHPRTGVLQLTPLNYI 752
Query: 877 PSTHATPVCSVECPKGILFVAENSLNL 903
P A + KGI+ V+ N L +
Sbjct: 753 PFKSAWNFDGSQF-KGIICVSANELRI 778
>gi|389744702|gb|EIM85884.1| hypothetical protein STEHIDRAFT_121882 [Stereum hirsutum FP-91666
SS1]
Length = 1255
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 23/234 (9%)
Query: 448 DGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGIS 507
DG +L + L +NIAPILD D + C G GSLR+IR+G
Sbjct: 444 DGRILGMKGKYLEVVHSWRNIAPILDAVKADTDGSGLPHIVTCSGGKSTGSLRVIRNGAD 503
Query: 508 LEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRV----GLNFTDVTDSV 563
++ + +TG W +R SD HS+LV S +ET + R L + +
Sbjct: 504 FQEKAVVDGL-DNMTGLWALRSHNSDKDHSYLVASDKDETHLFRFEGPESLRRVESSSES 562
Query: 564 GFRPDVCTLACGLVAD---GLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEH-V 619
FR + TLA V D L++Q+ + V+L V + + + W PE
Sbjct: 563 YFRMNKPTLAVANVGDLDSSLILQVTSDKVQLLEFDAVLE------IFHLSSHWSPESGK 616
Query: 620 SISLGAVAHNMIIVSTSNPCFLFILGV---RSLSVSHYEIYEMQHMRLQSELSC 670
I+L +++ ++++ + +LG+ R+++V +Y + S LSC
Sbjct: 617 QITLASISPTQVLLALDGGT-VVLLGLDKSRNMTVLSTRLYNAE----ISALSC 665
>gi|255956643|ref|XP_002569074.1| Pc21g20880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590785|emb|CAP96985.1| Pc21g20880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1140
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLS-ECLYKGPPCKALLWVEGRFLS 441
+WE + + + D G F + + G E L K L+++ G L
Sbjct: 289 AWEKVDSQ--RWLLADDYGRLFFLSFILNNMGEIDDWKLEYLGKTSRASVLVYLGGGMLF 346
Query: 442 AFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFAC 490
GD VL+ + + NIAPILD +++D + + ++
Sbjct: 347 VGSHHGDSQVLRLDGSSFEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTG 406
Query: 491 CGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
G +G+LR +RSG+ +E+L + + IT W ++ + D + + L+++FV+ETRV
Sbjct: 407 SGAFDDGTLRSVRSGVGMEELGVLGEM-EHITDFWGLQTRSKDDFLNTLIVTFVDETRVF 465
Query: 551 RVGLN--FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAV 590
+ + ++ + +G CTL + ++Q+ + V
Sbjct: 466 QFSTDGEVEELDNFLGLSLTECTLLVTRLQGDRILQVTEQRV 507
>gi|115397303|ref|XP_001214243.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192434|gb|EAU34134.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1140
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 132/307 (42%), Gaps = 33/307 (10%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFL 440
+WE + + + D G F + + S+ ++V + + G +A L+++ G +
Sbjct: 288 AWEQVDSQ--RWLLADDYGRLFFLMLVLDSE-NQVQGWQLDHLGNTSRASTLVYLGGGVI 344
Query: 441 SAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFA 489
GD VL+ +G + NIAPILD +++D + + ++
Sbjct: 345 FVGSHQGDSQVLRVGDGSFEIIQTLPNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVT 404
Query: 490 CCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRV 549
G +G+LR +RSG+ +E+L + + IT W ++ K + L+++F++ETRV
Sbjct: 405 GSGAFDDGTLRSVRSGVGMEELGVLGEM-EHITDLWGLQFKAKGDFLDTLLVTFIDETRV 463
Query: 550 LRVGLN--FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLS 607
+ ++ +G TL + G ++Q+ + R+ + M S
Sbjct: 464 FHFSSDGEVEELDQFLGLSLSENTLLAANLPGGRILQVTER--RVLIADME--------S 513
Query: 608 YPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSE 667
V W P I A A+ +V + + + +R ++ +I ++ S+
Sbjct: 514 EMVTYEWTPSDQLIITSASANEDSVVLVAGGELMTVFDIR----NNVQIVTQKNFGADSQ 569
Query: 668 LSCISIP 674
+S +++P
Sbjct: 570 ISGVTVP 576
>gi|121699866|ref|XP_001268198.1| UV-damaged DNA binding protein, putative [Aspergillus clavatus NRRL
1]
gi|119396340|gb|EAW06772.1| UV-damaged DNA binding protein, putative [Aspergillus clavatus NRRL
1]
Length = 1140
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 53/336 (15%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLS-ECLYKGPPCKALLWVEGRFLS 441
+WE + + + D G F + + SD + L K L+++ G L
Sbjct: 289 AWEQVDSQ--RWLLADDYGRLFFLMLVLDSDNQVESWKLDLLGKTSRASVLVYLGGGVLF 346
Query: 442 AFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFAC 490
GD VL+ NG + + NIAPILD +++D + ++
Sbjct: 347 LGSHQGDSQVLRISNGSVDVVQTLPNIAPILDFTIMDLGSRTSESQTHEFSSGQARIVTG 406
Query: 491 CGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
G +G+LR +RSG+ +E+L + IT W +++ + L+++FV+ETRV
Sbjct: 407 SGAFDDGTLRSVRSGVGMEELGVLGEMDH-ITDLWGLQVGSKGDFLDILLVTFVDETRVF 465
Query: 551 RVGLN--FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSY 608
+ ++ +G TL + G ++Q+ + V ++A G ++Y
Sbjct: 466 HFSPDGEVEEMDHFLGLSLSENTLLAANLPGGRILQVTERRV------LIAEVEGGMVTY 519
Query: 609 PVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSEL 668
W P + I A +N +IV + + +L + + +RL ++
Sbjct: 520 ----EWTPPNQLIITAASTNNDMIVLVAGGELVTVLDIGN------------EVRLVTQ- 562
Query: 669 SCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
K S +S +VPA P GV I
Sbjct: 563 -------------KDFGANSQISGVTVPASPTGVFI 585
>gi|392591958|gb|EIW81285.1| hypothetical protein CONPUDRAFT_56293 [Coniophora puteana
RWD-64-598 SS2]
Length = 1245
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 449 GMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISL 508
G ++ L QNIAPI D ++VD + + ++ C G GS+R++RSG
Sbjct: 424 GFIVNGRGSHLTEVDRFQNIAPIYDAALVDPDNSGQYEVVTCSGGQNTGSIRLVRSGADF 483
Query: 509 EKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRV 552
++ I IT W VR SDP H+ +V S +ET V R+
Sbjct: 484 QEAAAIGGI-PNITNIWPVRSLYSDPIHTHIVASTPQETYVFRI 526
>gi|324502823|gb|ADY41238.1| DNA damage-binding protein 1, partial [Ascaris suum]
Length = 1129
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+API DM V++ ++ Q+ C G +GSLRIIR+GI +E+L G+ +T
Sbjct: 352 NLAPIRDMVVINADGQQ--QVITCSGAFKDGSLRIIRNGIGIEELASVE--LPGVKALFT 407
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
+ V +LV+ FV+ET +L++ + T GF TL G V G + QI
Sbjct: 408 --LNVESELDDYLVVGFVDETHILKISGEELEDTQLPGFSTTEQTLWAGRVGSGGIAQI 464
>gi|429850956|gb|ELA26181.1| DNA damage-binding protein 1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1409
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 86/197 (43%), Gaps = 39/197 (19%)
Query: 441 SAFVEMGDGMVL-----------------KEENGRLVYTSPIQNIAPILDMSVVDYHDEK 483
S V MGDGM+ E ++V T P NIAPILD +++D +
Sbjct: 336 SCLVYMGDGMLFLGSHYGDSQLLKVDVTAGSETTQIVQTIP--NIAPILDFAIMDLGNAG 393
Query: 484 RDQ-----------MFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVS 532
Q + A CGV GSLR IRS + LE + + + G +++R S
Sbjct: 394 DSQVGNAFSSGQARIVAGCGVHQNGSLRSIRSSVGLEDIGVLEDL-SDVRGLFSLRSNGS 452
Query: 533 DPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAV 590
D + LV+SF+ +TRV R +V G D TL + +G L+Q+ N+
Sbjct: 453 DKDDT-LVVSFITDTRVFRFDAEEGIEEVFQFQGLGLDKPTLIASTLPNGQLLQVTANSA 511
Query: 591 RLCMPTMVAHSGGIPLS 607
L P GGI LS
Sbjct: 512 ALLDP-----EGGITLS 523
>gi|242803623|ref|XP_002484212.1| UV-damaged DNA binding protein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717557|gb|EED16978.1| UV-damaged DNA binding protein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1140
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 122/291 (41%), Gaps = 32/291 (10%)
Query: 399 DTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFLSAFVEMGDGMVLKEEN 456
D G F + + S ++V + Y G +A L+++ GD V++
Sbjct: 303 DYGRLFFLMLVLDSR-NEVEGWKIDYLGSASRASVLIYLGAGMTFIGSHQGDSQVIRISE 361
Query: 457 GRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFACCGVAPEGSLRIIRSG 505
G I NIAPILD +++D + D ++ G +G+LR +RSG
Sbjct: 362 GSFEIIQTISNIAPILDFTIMDLGTREGDNYTHEFSSGQARIVTGSGAFNDGTLRSVRSG 421
Query: 506 ISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSV 563
+ +E+L + + IT W +++ +D + LV++FV ETR+ + + ++ + +
Sbjct: 422 VGMEELGVLGEM-EHITDMWALQVSSTDEFSDTLVVTFVNETRIFQFSSDGEVEELDEFL 480
Query: 564 GFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISL 623
G TL + G ++ + + V + S V + W P+ +I+
Sbjct: 481 GLNLAENTLLSNNLPGGRIIHVTERGVSIADTD----------SGMVISKWSPDEQTITS 530
Query: 624 GAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIP 674
A ++V T + + L V + ++ + ++S ++IP
Sbjct: 531 AACNDERLVVVTGGQVIVVLDITGDLKVLSQKDFDKDN-----QVSGVTIP 576
>gi|340508225|gb|EGR33979.1| splicing factor subunit 130kda, putative [Ichthyophthirius
multifiliis]
Length = 983
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L ++N++ I D+ V D E Q++ C SLRI+R G+ + ++ A
Sbjct: 390 LQQVDQLENLSAISDIKVSDLTGEGHPQIYTLCSAGYRSSLRILRHGLQVNEV--AASRL 447
Query: 519 QGI-TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLV 577
G+ TG WT++ + + + +++LSF ++T VL + VTDS G + T+ L+
Sbjct: 448 PGVPTGIWTIKSRYDENFSKYIILSFSKQTLVLSISDRVQQVTDS-GIDLNKQTIHANLL 506
Query: 578 ADGLLVQIHQNAVR 591
D ++Q+ + R
Sbjct: 507 EDNAIIQVMPDGFR 520
>gi|171691144|ref|XP_001910497.1| hypothetical protein [Podospora anserina S mat+]
gi|170945520|emb|CAP71632.1| unnamed protein product [Podospora anserina S mat+]
Length = 1158
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 42/240 (17%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFACCG--VAPEGSLRIIRSG 505
L I NI PI+D +V+D + + Q CG V +GSLR +RSG
Sbjct: 374 LTLIQTISNIGPIMDFAVMDMGNRGGEDSQLGNEYSSGQARIVCGSGVYKDGSLRSVRSG 433
Query: 506 ISLEKL-LRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGL--NFTDVTDS 562
+ LE + L + Q + G +++R V + L +SF+ ETRV + +V D
Sbjct: 434 VGLEDVGLLLEDLGQHVRGVFSLRGAVGEGKMDTLAVSFLTETRVFKFDSEGGVEEVGDF 493
Query: 563 VGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSIS 622
+GF D TL + G+++Q+ V L + A SG +W P
Sbjct: 494 MGFGLDCQTLLARNLGGGMILQVTTRGVVL----IDAESG------VTVATWVPRD---- 539
Query: 623 LGAVAHNMIIVSTSNPCFLFI----LGVRSLSVSHYEIYEMQHMRL--QSELSCISI-PQ 675
N II +++N +L + G+ S+S + E+ ++ + Q +++CI + PQ
Sbjct: 540 -----ENTIINASANGEWLLLSVEGTGLVSISTAGNELRLVKEKDISQQDQVACIHVAPQ 594
>gi|449549048|gb|EMD40014.1| hypothetical protein CERSUDRAFT_63520 [Ceriporiopsis subvermispora
B]
Length = 1265
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 24/238 (10%)
Query: 445 EMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRS 504
E DG ++ + + QNIAPI+D + D D + Q+ C G G+L+++R+
Sbjct: 440 EGRDGRIIATKGQFIEVLDTFQNIAPIVDAVLADLDDSGQSQIITCSGGRNSGALKVVRT 499
Query: 505 GISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVG 564
G ++L R I GIT W VR + S LV S ET V + + +DV +
Sbjct: 500 GADFQELARVNGI-TGITSLWPVRSRFEHSTDSHLVASTETETYVFK--FDSSDVITQLD 556
Query: 565 FRPD-VCTLACGLVADGLLVQIHQNA----------------VRLCMPTMVAHSGGIPLS 607
D T A L A + ++ NA V M T++ + + L
Sbjct: 557 SSADGFITTAPTLAAANIPRRVSTNAGGRVSSSYVDSSLVIQVTPEMITLLEYDAALGLF 616
Query: 608 YPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQ 665
V W P+ S GA+ IV+ ++G+ V + + ++Q
Sbjct: 617 SLVGEGWDPK----SQGAIGGRRRIVAADVNASQIVVGLDGGKVCLLNLADNSRFQVQ 670
>gi|402588688|gb|EJW82621.1| splicing factor 3b [Wuchereria bancrofti]
Length = 601
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 478 DYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHS 537
D +E Q++ G +++++R+G+ + ++ + + WTV+ + D + S
Sbjct: 429 DLANEDSPQIYTLVGRGALSAVKVLRNGLEVTEM-AVSELPGNPNAVWTVKRNIDDKFDS 487
Query: 538 FLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVR 591
+V+SFV T VL +G +VTDS GF TL C L+ D L+Q++ + +R
Sbjct: 488 HIVVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLGCALIGDDALLQVYPDGIR 540
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 12/161 (7%)
Query: 32 YLAKCVLKGSVVL-QVAHGHLRS-PTSNDVVFGKETSIELVIIG-EDGIVQSVCEQAVFG 88
YL L+GS + Q HG P +V + ++L+ + G + +C FG
Sbjct: 32 YLYNLTLQGSSAINQAIHGSFCGLPKQQEVCIARGNLLQLLFCDPKTGKIHVLCSHNAFG 91
Query: 89 TIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
I+ L KD +V+ SD+G++ L + + F V Q G
Sbjct: 92 IIRSLLAFRLTGG---------SKDYIVIGSDAGRIVILEYNAQKVCFERVHQETFGKTG 142
Query: 149 NSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
R G+ LAVD G I + A E + ++ ++ + +++
Sbjct: 143 CRRIVPGQFLAVDPKGRAILIGAVERQKLVYIMNRDASANL 183
>gi|310796681|gb|EFQ32142.1| CPSF A subunit region [Glomerella graminicola M1.001]
Length = 1163
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 37/195 (18%)
Query: 441 SAFVEMGDGMV---------------LKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD 485
S V MGDGM+ ++ E +LV T P NIAPILD S++D +
Sbjct: 338 SCLVYMGDGMLFLGSHYGDSQLLSVSVETETTKLVQTIP--NIAPILDFSIMDLGNAGDS 395
Query: 486 Q-----------MFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDP 534
Q + A CGV GSLR IRS + LE + + + + G +++R S
Sbjct: 396 QVGNAFSSGQARIVAGCGVHQNGSLRSIRSSVGLEDIGVLDDL-RDVRGLFSLRSYGSAK 454
Query: 535 YHSFLVLSFVEETRVLRVG--LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRL 592
+ LV+SF+ ETRV R +V D G D TL + G L+QI AV
Sbjct: 455 VDT-LVVSFITETRVFRFDPEGGIEEVFDFQGLVLDRPTLVATTLPSGHLLQITATAV-- 511
Query: 593 CMPTMVAHSGGIPLS 607
T++ G+ LS
Sbjct: 512 ---TVLDSESGVTLS 523
>gi|320164105|gb|EFW41004.1| splicing factor 3B subunit 3 [Capsaspora owczarzaki ATCC 30864]
Length = 1218
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV +++ AP + V D E Q + CG P +LRI+R G+ + +L T +
Sbjct: 416 LVLLDVMESTAPTMQCRVEDLLGEDAPQFYLLCGRGPNSTLRILRHGLEVSQLAAT-ELT 474
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
W+V+ + D + ++ ++S+ T VL VG V+DS G V T+A +
Sbjct: 475 ASPVAIWSVKRSIHDIHDTYFIVSWASATVVLSVGDQVAPVSDS-GLLLTVGTIAVSRIG 533
Query: 579 DGLLVQIHQNAVR 591
+ L+Q++ + +R
Sbjct: 534 EDDLLQVYTDGIR 546
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 30 IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGE-DGIVQSVCEQAVFG 88
+H + + + S + HG+ ++ G+ + +EL+ + + V+++ +FG
Sbjct: 3 MHLYSLTLQRASAITCAVHGNFSGTKQQEIAVGRGSVLELLALDQASAKVKTIASINIFG 62
Query: 89 TIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
++ L KD LVV SDSG+++ L + + F +VHL G
Sbjct: 63 VVRCLTAFRLTGA---------SKDYLVVGSDSGRVAILEYNPTKYEF---ERVHLETYG 110
Query: 149 NS---RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
S R G+ LA D+ G I +SA E + ++ ++ S
Sbjct: 111 KSGSRRIVPGQYLAADAKGRAIMISAVEKQKLVYVMNRDS 150
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 824 NLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATP 883
NL TR +G PV L P A +ALS RPW+ + + T +S+ A
Sbjct: 697 NLTDTRTRYLGTRPVMLFPSKVHGAAGFLALSSRPWIFYVQQGTPTLTPLSYDALDCAAT 756
Query: 884 VCSVECPKGILFVAENSLNL 903
+ CP G++ +A N+L +
Sbjct: 757 FSAANCPNGLVAIAGNTLRV 776
>gi|449019082|dbj|BAM82484.1| UV-damaged DNA binding protein [Cyanidioschyzon merolae strain 10D]
Length = 1372
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
NI PI D+ V + C GV+ GSLRIIR+GI + A GI +T
Sbjct: 526 NIGPIQDLLVTGDDSFSDGHIITCSGVSRMGSLRIIRNGIGFVE--HAAVELDGIKALFT 583
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIH 586
+ S + FLV+SF ETRVLR+ + V + LA L A+ L + +
Sbjct: 584 LPSLTSPEWDEFLVVSFTAETRVLRLAAHDELVEVESLAVDEATILAMRLPAEQLALWVT 643
Query: 587 QNAVRLCMPTMVAHSGGIPLSYPVCTSWFP---EHVSISLGAVAHNMIIVSTSNPCFLFI 643
+ V L T+ L P +W P E ++ ++ H +++VSTSN L++
Sbjct: 644 ASYVGLVDLTL--------LERP-AVAWTPPSSEQITNAVFDELHKLVLVSTSN-AQLYV 693
Query: 644 LGVRSLSVSHYEIYEMQHMRLQSELSCI 671
L R S + + L +E++CI
Sbjct: 694 LQQRKTS-----LVPVGSQTLPAEVACI 716
>gi|190345965|gb|EDK37945.2| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC
6260]
Length = 1206
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 51 LRSPTSNDVVFGKETSIEL-VIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQV 109
L + S ++V TSIEL E G ++ +C Q V G I+++ + S +
Sbjct: 30 LDNKKSQELVLATSTSIELWQFHSESGKIKQICHQQVIGVIQNI------DRIRKGGSNL 83
Query: 110 MGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAV 169
DLLV+ SDSG+LS L F + +FFPV Q S G +R G L VD I +
Sbjct: 84 ---DLLVITSDSGRLSILEFDKDELKFFPVVQEPHSKNGMNRTTPGEYLCVDPQDRTITI 140
Query: 170 SAYE-DRL 176
A E D+L
Sbjct: 141 GAIERDKL 148
>gi|303285993|ref|XP_003062286.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455803|gb|EEH53105.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1469
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 24/153 (15%)
Query: 465 IQNIAPILDMSV-----VDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT-APIY 518
+ I+P++D++V V +R ++ A CG G+L +++ GI E + +
Sbjct: 523 VLGISPVIDLTVGASASVSGDTIERTELIAACGHGKNGALAVLQRGIQPELVTEVESGTL 582
Query: 519 QGITGTWTV--------RMKVS---------DPYHSFLVLSFVEETRVLRVGLNFTDVTD 561
G+ GTWTV R++ S DPYH++LV+S T +L G +V++
Sbjct: 583 PGLKGTWTVHHDSADNERLRGSAAAAAAQAVDPYHAYLVISLASSTMILETGEELKEVSE 642
Query: 562 SVGFRPDVCTLACG-LVADGLLVQIHQNAVRLC 593
V D TL G +VQ++ VR+
Sbjct: 643 HVELVTDAATLCAGNAFGRERIVQVYDKGVRVA 675
>gi|320581947|gb|EFW96166.1| hypothetical protein HPODL_2449 [Ogataea parapolymorpha DL-1]
Length = 1203
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 36/199 (18%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMV-----LKEENGR----------------------- 458
P C +LL FL A E GD + L +EN R
Sbjct: 342 PVCTSLLIFRAGFLYANCESGDQYLYQFDKLGDENQRKFSSQDYPDEVAVLSDETTLFEP 401
Query: 459 -----LVYTSPIQNIAPILDMSVVDYHDEKR-DQMFACCGVAPEGSLRIIRSGISLEKLL 512
L + ++NI P++D + + ++ +++ CG P +L+++ + +++
Sbjct: 402 RPLENLNLVNIVENINPLIDAKLYNSNETTSLPVIYSLCGTGPRSALKVLNHELPFSEVV 461
Query: 513 RTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTL 572
T + + + ++ D Y ++VLSFV+ T VLR+G + +V +S G D TL
Sbjct: 462 -TQELPSVVQKVFVSKLNRDDEYDKYIVLSFVDGTLVLRIGEDVEEVENS-GLVLDTNTL 519
Query: 573 ACGLVADGLLVQIHQNAVR 591
V LVQ+H N VR
Sbjct: 520 GVFQVGSTALVQVHPNGVR 538
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 10/128 (7%)
Query: 56 SNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDL 114
+VV T++EL + + G V Q F I+ + A S KDL
Sbjct: 34 QQEVVRATATTLELWKLNRNNGDFYKVVAQNTFSHIRSI---------EALKSSGSDKDL 84
Query: 115 LVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYED 174
L++ SDSG L+ L NE RF V+ G R G +AVD +SA E
Sbjct: 85 LIITSDSGNLTVLEMNNEKGRFESVSNEPYFKTGLRRISPGEYIAVDGRSRAAMISAIEK 144
Query: 175 RLGLFSLS 182
++ +
Sbjct: 145 NKFVYKFT 152
>gi|209875989|ref|XP_002139437.1| spliceosomal protein SAP 130 [Cryptosporidium muris RN66]
gi|209555043|gb|EEA05088.1| spliceosomal protein SAP 130, putative [Cryptosporidium muris RN66]
Length = 1300
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 132/328 (40%), Gaps = 53/328 (16%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
+ +++PI+DM + D E Q++ CG P +LRI G ++E++ T P+
Sbjct: 399 MHSLSPIIDMKIADSSGEFGPQIYVACGRGPRSTLRICTYGKAVEEMAET-PLPGRPRFI 457
Query: 525 WTVR---------------MKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
WT++ ++ YHSF+++SF++ T VL VG +++DS +
Sbjct: 458 WTLKKGGTSYILNKETSETLEDEGNYHSFIIISFIDRTLVLSVGEQVEEISDSPFTLSES 517
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHN 629
A + +QI + V+L + + V +S++L
Sbjct: 518 TIYASSMELKNSYLQILETYVKLITEEKIYEWKAPDGRHIVAADSNGRQISLALSG---G 574
Query: 630 MIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISL 689
I++ N L + + S + E+ H + ++ CISI Q
Sbjct: 575 YIVILEMNTIDL----ISGTTNSIMGLTELCHREVSYDIICISIQQ-------------- 616
Query: 690 VSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGC 749
P + Y V + SV V ++ ++ + + V+ N +
Sbjct: 617 ------LIYPTKLCREYVAVGTSTDNSVRVY-WINTADKKLKQTSTQVMPN------ASS 663
Query: 750 IPQDVRLV---LADQFYVLAGLRNGMLL 774
IP+++ L L D Y+L GL NG+LL
Sbjct: 664 IPENIVLYKPGLNDSLYLLIGLNNGVLL 691
>gi|339235331|ref|XP_003379220.1| DNA damage-binding protein 1 [Trichinella spiralis]
gi|316978142|gb|EFV61158.1| DNA damage-binding protein 1 [Trichinella spiralis]
Length = 1329
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 430 KALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFA 489
++LL+V R + + + + + +E V + P N+API+DM +VD + + ++ +
Sbjct: 483 ESLLFVGSRIADSKLLRLNSLAICDETWTEVESFP--NLAPIVDMVLVDMAKQGQGEIIS 540
Query: 490 CCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFV-EETR 548
C G +GSL++IRSGI L +L R + + W +R ++PY + +L V T
Sbjct: 541 CSGYGKDGSLKVIRSGIGLYELARLDIPF--VNRVWALRYITNEPYDNLFILGVVGNSTM 598
Query: 549 VLRVGLNFTDVTDSVGFRPDVCTLACG--LVADGLL--VQIHQNAVRLCMPTMVAHSGGI 604
V++ N + G T +ADG L VQ+ ++ ++L ++
Sbjct: 599 VIKFQENQAEQISVDGLETAEQTFVAANCHMADGALAIVQVVRSKIQLADASLDGRK--- 655
Query: 605 PLSYPVCTSW-FPEHVSISLGA 625
W FP+ +SL A
Sbjct: 656 ------LDEWKFPDGSEVSLAA 671
>gi|452820919|gb|EME27955.1| splicing factor 3B subunit 3 [Galdieria sulphuraria]
Length = 1294
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISL-EKLLRTAPIYQGITGTW 525
++AP+ + D++ E Q+ G GS + +R G E + P Y G +
Sbjct: 404 SLAPLTCWQIGDFYGEGSPQIVVGSGRRHRGSWKTLRLGYRWTEMAVSELPGYP--VGVF 461
Query: 526 TVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
TVR + D Y S++++SFV + VL VG +V+DS GF V T+ L ++ +VQ+
Sbjct: 462 TVREQQQDSYDSYIIVSFVNASLVLSVGETVEEVSDS-GFSTFVSTIFVQLFSNNSIVQV 520
Query: 586 HQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLG-AVAHNMIIVSTSNPCFLFIL 644
H +R P + P P+ + I + A ++I+ S F L
Sbjct: 521 HAQGIRHIRPDLQTVHEWKP----------PKGLFIQVADGNASQLVIILNSKQLLYFEL 570
Query: 645 GVRSL--SVSHYEIYEMQHMRLQSELSCISI 673
+ + E+ + Q S L C+SI
Sbjct: 571 DETGMLTEIQEVELIQDQSYESSSFLPCVSI 601
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 41 SVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNK 100
S + HG +P + ++V G++TS+ELV E G ++S+C Q ++G I+ L K
Sbjct: 12 SAIYFSVHGSFSAPRAIELVLGRQTSLELVRPDEQGHLKSLCFQEIYGIIRSL------K 65
Query: 101 KFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS---RHQLGRM 157
F ++ +D L++ SDSGK++ L + + F +VH+ G S R G
Sbjct: 66 AFRLTGAK---RDYLLIGSDSGKITVLLYNPSTYCF---ERVHIETFGKSGCRRIVPGEY 119
Query: 158 LAVDSSGCLIAVSAYEDR 175
LA D G + A E +
Sbjct: 120 LATDPKGRACMIGAIEKQ 137
>gi|449540702|gb|EMD31691.1| hypothetical protein CERSUDRAFT_109269 [Ceriporiopsis subvermispora
B]
Length = 1265
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 445 EMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRS 504
E DG ++ + + QN+API+D + D D + Q+ C G G+L+++R+
Sbjct: 440 EGRDGRIIATKGQFIEVLDTFQNMAPIMDAVLADLDDSGQSQIITCSGGRNSGALKVVRA 499
Query: 505 GISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLR 551
G ++L R I GIT W VR + S LV S ET V +
Sbjct: 500 GADFQELARVNGI-TGITSLWPVRSRSEHSTDSHLVASTETETYVFK 545
>gi|146420838|ref|XP_001486372.1| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC
6260]
Length = 1206
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 51 LRSPTSNDVVFGKETSIELVIIG-EDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQV 109
L + S ++V TSIEL E G ++ +C Q V G I+++ + S +
Sbjct: 30 LDNKKSQELVLATSTSIELWQFHLESGKIKQICHQQVIGVIQNI------DRIRKGGSNL 83
Query: 110 MGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAV 169
DLLV+ SDSG+LS L F + +FFPV Q S G +R G L VD I +
Sbjct: 84 ---DLLVITSDSGRLSILEFDKDELKFFPVVQEPHSKNGMNRTTPGEYLCVDPQDRTITI 140
Query: 170 SAYE-DRL 176
A E D+L
Sbjct: 141 GAIERDKL 148
>gi|426195893|gb|EKV45822.1| hypothetical protein AGABI2DRAFT_72896 [Agaricus bisporus var.
bisporus H97]
Length = 1229
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 447 GDGMVLKEENGRLVYT--------SPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGS 498
G V +E+G +V T +NIAPILD +VD D + Q+ C G GS
Sbjct: 433 GSDTVSPQESGNIVETRGSYLNVLERFKNIAPILDACLVD-PDSGQRQIVTCSGGKNTGS 491
Query: 499 LRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTD 558
+ +R+G E+++ P + W V+ ++ + SFL+LSF + ++++ D
Sbjct: 492 INAVRNGADFEEIVNI-PGVPHVLKIWAVKSRLEEAEDSFLLLSFCNSSSLIKI----ND 546
Query: 559 VTDSVGFRPDVCTLACGLV 577
D++ F P +A GLV
Sbjct: 547 SGDNISFAPFDNAIASGLV 565
>gi|225680146|gb|EEH18430.1| DNA damage-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 1138
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 17/225 (7%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLS-ECLYKGPPCKALLWVEGRFLS 441
+WE + + + D G F + + D + L P L+++ G
Sbjct: 359 AWEQVDGQ--RWLLADDYGRLFFLMLILDEDNAVQSWKLDLLGNIPRASVLVYLGGGVTF 416
Query: 442 AFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY---------HDEKRDQ--MFAC 490
GD +++ G NIAPILD +++D HD Q +
Sbjct: 417 IGSHQGDSQLIRITEGSFEIIQTFSNIAPILDFTIMDLGGRAGENQTHDFSSGQARIVTG 476
Query: 491 CGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
G +GSLR +RSG+ +E++ + + IT W +R+ + + L++SFV+ETRV
Sbjct: 477 SGAFDDGSLRSVRSGVGMEEVGVLGAM-EHITDLWALRVACQEGFSDTLLVSFVDETRVF 535
Query: 551 RVGLN--FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLC 593
+ + + +G TL + +G ++Q+ + VR+
Sbjct: 536 HFTQDGEVEEKDEFMGLGLAESTLLAANLPNGRILQVTERNVRVA 580
>gi|226291941|gb|EEH47369.1| DNA damage-binding protein 1a [Paracoccidioides brasiliensis Pb18]
Length = 1209
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 17/225 (7%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLS-ECLYKGPPCKALLWVEGRFLS 441
+WE + + + D G F + + D + L P L+++ G
Sbjct: 347 AWEQVDGQ--RWLLADDYGRLFFLMLILDEDNAVQSWKLDLLGNIPRASVLVYLGGGVTF 404
Query: 442 AFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY---------HDEKRDQ--MFAC 490
GD +++ G NIAPILD +++D HD Q +
Sbjct: 405 IGSHQGDSQLIRITEGSFEIIQTFSNIAPILDFTIMDLGGRAGENQTHDFSSGQARIVTG 464
Query: 491 CGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
G +GSLR +RSG+ +E++ + + IT W +R+ + + L++SFV+ETRV
Sbjct: 465 SGAFDDGSLRSVRSGVGMEEVGVLGAM-EHITDLWALRVACQEGFSDTLLVSFVDETRVF 523
Query: 551 RVGLN--FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLC 593
+ + + +G TL + +G ++Q+ + VR+
Sbjct: 524 HFTQDGEVEEKDEFMGLGLAESTLLAANLPNGRILQVTERNVRVA 568
>gi|391865638|gb|EIT74917.1| damage-specific DNA binding complex, subunit DDB1 [Aspergillus
oryzae 3.042]
Length = 1135
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFL 440
+WE + + + D G F + + SD ++V + + G +A L+++ G +
Sbjct: 284 AWEGVDSQ--RWLLADDYGRLFFLMLVLDSD-NQVQGWKLDHLGNTSRASALVYLGGGIV 340
Query: 441 SAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFA 489
GD VL+ NG + NIAPILD +++D + + ++
Sbjct: 341 FVGSHQGDSQVLRIGNGSFEIIQALSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVT 400
Query: 490 CCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRV 549
G +G+LR +RSG+ +E+L + + IT W ++++ L+++F++ETRV
Sbjct: 401 GSGAFDDGTLRSVRSGVGMEELGVLGDM-EHITDLWGLQVQAGGDTLDTLLVTFIDETRV 459
Query: 550 L 550
Sbjct: 460 F 460
>gi|238491136|ref|XP_002376805.1| UV-damaged DNA binding protein, putative [Aspergillus flavus
NRRL3357]
gi|220697218|gb|EED53559.1| UV-damaged DNA binding protein, putative [Aspergillus flavus
NRRL3357]
Length = 1117
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFL 440
+WE + + + D G F + + SD ++V + + G +A L+++ G +
Sbjct: 266 AWEGVDSQ--RWLLADDYGRLFFLMLVLDSD-NQVQGWKLDHLGNTSRASALVYLGGGIV 322
Query: 441 SAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFA 489
GD VL+ NG + NIAPILD +++D + + ++
Sbjct: 323 FVGSHQGDSQVLRIGNGSFEIIQALSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVT 382
Query: 490 CCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRV 549
G +G+LR +RSG+ +E+L + + IT W ++++ L+++F++ETRV
Sbjct: 383 GSGAFDDGTLRSVRSGVGMEELGVLGDM-EHITDLWGLQVQAGGDTLDTLLVTFIDETRV 441
Query: 550 L 550
Sbjct: 442 F 442
>gi|169773185|ref|XP_001821061.1| UV-damaged DNA binding protein [Aspergillus oryzae RIB40]
gi|83768922|dbj|BAE59059.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1139
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFL 440
+WE + + + D G F + + SD ++V + + G +A L+++ G +
Sbjct: 288 AWEGVDSQ--RWLLADDYGRLFFLMLVLDSD-NQVQGWKLDHLGNTSRASALVYLGGGIV 344
Query: 441 SAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFA 489
GD VL+ NG + NIAPILD +++D + + ++
Sbjct: 345 FVGSHQGDSQVLRIGNGSFEIIQALSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVT 404
Query: 490 CCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRV 549
G +G+LR +RSG+ +E+L + + IT W ++++ L+++F++ETRV
Sbjct: 405 GSGAFDDGTLRSVRSGVGMEELGVLGDM-EHITDLWGLQVQAGGDTLDTLLVTFIDETRV 463
Query: 550 L 550
Sbjct: 464 F 464
>gi|342318986|gb|EGU10938.1| DNA damage-binding protein 1b [Rhodotorula glutinis ATCC 204091]
Length = 1102
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 17/188 (9%)
Query: 375 PSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLS-ECLYKGPPCKALL 433
P + +WSW + ++ G+ F + + +G +S + + A++
Sbjct: 289 PVARITAWSWRNNDRLLLGDIY----GKLFEVNLRRAENGVVSGISAQDVGDAASASAIV 344
Query: 434 WVEGRFLSAFVEMGDGMVLK----EENG-----RLVYTSPIQNIAPILDMSVVDYHDEKR 484
+ + GD +++ E+ G L I NIAPI+D+ +V H +
Sbjct: 345 PLGATTVYLASRFGDSQIVRFVSGEDEGMAGPAELALVDSISNIAPIVDLCIVSAHGQAA 404
Query: 485 DQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFV 544
+ C G GSLR+IR G+ L +L A G+ W++ + LVL F
Sbjct: 405 NYAVTCSGAYKTGSLRVIRRGVGLSEL--AALEADGVQQAWSL-TSPAPSTEPILVLGFF 461
Query: 545 EETRVLRV 552
ETRV R+
Sbjct: 462 SETRVFRM 469
>gi|406865227|gb|EKD18269.1| CPSF A subunit region [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1146
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 130/298 (43%), Gaps = 40/298 (13%)
Query: 399 DTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWV---EGRFLSAFVEMGDGMV---L 452
D G ++ I DG + + + + G KA V +G F E ++ L
Sbjct: 304 DYGNLHLLSILSNHDGEVMGM-DLMLLGTISKATTMVNLGDGVFFVGSHEAESQVIRVDL 362
Query: 453 KEENGRLVYTSPIQNIAPILDMSVVDYHDEK-----------RDQMFACCGVAPEGSLRI 501
++ + +QNIAPILD++V+D + + + ++ G GSLR
Sbjct: 363 DRKDHYITIIQTMQNIAPILDLAVMDMGNREGESQSNEYSTGQTRLVTGSGAFQSGSLRS 422
Query: 502 IRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTD 561
+RSG+ LE + I +++R + LV+S ETRV +V +
Sbjct: 423 VRSGVGLEDIGILVDEIGDIRDVYSMRSTAGTHFDDILVVSLPTETRVFTFLGEIEEVAE 482
Query: 562 SVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP---EH 618
G + TL +++G+++Q+ +++V++ P P SY V W P E+
Sbjct: 483 FRGLELNCQTLLASGLSNGMMLQVTESSVKILGPG--------P-SY-VAAKWTPPAGEY 532
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFI-LGVRSLSVSHYEIYEMQHMRLQSELSCISIPQ 675
++ + ++ ++ VS + L I G++ ++V Q + +++C+ +P+
Sbjct: 533 ITDASANDSYVLVSVSGTTLVSLDIGQGLKEVAV--------QPLEAADQVACVYVPR 582
>gi|299743623|ref|XP_001835883.2| hypothetical protein CC1G_02971 [Coprinopsis cinerea okayama7#130]
gi|298405741|gb|EAU85948.2| hypothetical protein CC1G_02971 [Coprinopsis cinerea okayama7#130]
Length = 1282
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 99/250 (39%), Gaps = 22/250 (8%)
Query: 449 GMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISL 508
G ++K E L +NIAPI D VVD ++++ C G GSL I+RSG
Sbjct: 443 GRIIKPEGSHLHVLHSFKNIAPINDAVVVDVEGNGQNEIVTCSGGYTSGSLNIVRSGAEY 502
Query: 509 EKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRV---GLNFT----DVTD 561
+ T P + WT++ D HS +V S + T + R+ G N T D T
Sbjct: 503 HEAA-TLPGVCNVNSLWTIKSNFEDTIHSHIVASTHDRTLLFRIKDDGRNTTFTLLDSTA 561
Query: 562 SVGFRPDVCTLACGLVADGL-------------LVQIHQNAVRLCMPTMVAHSGGIPLSY 608
+ F D T+A V + +VQ+ N V L +V S+
Sbjct: 562 ARDFITDQPTVALANVRKRVSVERKSVYRDCNWVVQVTDNVVNLLEHDVVLGGFNKRASW 621
Query: 609 PVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSEL 668
+S P V I + ++++ S L +L + + E +R S +
Sbjct: 622 SPPSSVAPRPVEIVAADINPTQVVLALSG-GRLVVLRHNEEGTAFELVAEKNTLREISAV 680
Query: 669 SCISIPQKHP 678
SC + K P
Sbjct: 681 SCQAADTKTP 690
>gi|66811906|ref|XP_640132.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
gi|74854972|sp|Q54SA7.1|SF3B3_DICDI RecName: Full=Probable splicing factor 3B subunit 3
gi|60468134|gb|EAL66144.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
Length = 1256
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 454 EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLR 513
EE L TS + +++PI+D V+D E+ Q+++ CG SL+++R G+S+ +
Sbjct: 403 EELKNLEPTSHLSSLSPIIDFKVLDLVREENPQLYSLCGTGLNSSLKVLRHGLSV-TTIT 461
Query: 514 TAPIYQGITGTWTVRMKVS----DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDV 569
TA + +G WTV S D ++V+SFV T VL VG + +S G
Sbjct: 462 TANLPGVPSGIWTVPKSTSPNAIDQTDKYIVVSFVGTTSVLSVGDTIQENHES-GILETT 520
Query: 570 CTLACGLVADGLLVQIHQNAVR 591
TL + D ++Q+ R
Sbjct: 521 TTLLVKSMGDDAIIQVFPTGFR 542
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 32 YLAKCVLKG-SVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
YL L+ + V Q G+ ++V S+EL+ E+G +QSV VFG +
Sbjct: 2 YLYNLTLQRPTSVYQSISGNFSGTKQVEIVLNHGRSLELIRYDENGKMQSVLYTEVFGIV 61
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
+ +++P+ KD ++V SDSG++ L + ++ ++F + Q G
Sbjct: 62 R--SIIPFRLTSGT-------KDYIIVGSDSGRVVILEYNSQKNQFDKIHQETFGRSGCR 112
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIA 210
R G+ LAVD G + A E + ++ L+ S +++ I P E+
Sbjct: 113 RIVPGQYLAVDPKGRAFMIGAIEKQKLVYILNRDSSANLT---ISSPLEAH--------- 160
Query: 211 QKNSISGTIWSMCFISTDPRQPSKEHNPILAII 243
+ N+I ++SMC + NPI A I
Sbjct: 161 KSNTI---VFSMCGVDVGF------DNPIFATI 184
>gi|170580631|ref|XP_001895346.1| splicing factor 3B subunit 3 [Brugia malayi]
gi|158597745|gb|EDP35799.1| splicing factor 3B subunit 3, putative [Brugia malayi]
Length = 1181
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 140/391 (35%), Gaps = 102/391 (26%)
Query: 525 WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
WTV+ + D + S +V+SFV T VL +G +VTDS GF TL C L+ D
Sbjct: 425 WTVKRNIDDKFDSHIVVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLGCALIGDDA--- 480
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
LC+ T+ G I + + +V + A+ + ++ + ++
Sbjct: 481 -------LCIRTVFDILGLIG---ELMSGRHLVNVQLLKCALNRRQVAIALAGGELVYF- 529
Query: 645 GVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVII 704
EL ++ ERR+ + + +S S +P G +
Sbjct: 530 ----------------------ELDVTGQLNEYTERRELPADVLCMSLSEIPE---GELR 564
Query: 705 GYTFVIGTHRPSVEVLSFVPKEGLRVLA------------SGSIVLTNTMGTAISGCIPQ 752
+G +V ++S P++ L L SI++ GT
Sbjct: 565 SRFLTVGLADKTVRIISLDPQDCLSPLQLISFSMQALPSEPESIIVLEMFGTETQS---- 620
Query: 753 DVRLVLADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAAT 812
A ++ GL+NG LLR T
Sbjct: 621 ------ASTVHLNIGLQNGCLLR------------------------------------T 638
Query: 813 SSFESKDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTS 872
+ + EL N TR +G V L + ++A S R WLL + T
Sbjct: 639 TVDQVTGELTDN----RTRYLGTKSVKLFRVRIQSKDAIMAASSRAWLLYDYQSRFHLTP 694
Query: 873 ISFQPSTHATPVCSVECPKGILFVAENSLNL 903
+S+ A S +CP+GI+ +AEN+L +
Sbjct: 695 LSYAALEFAAGFSSEQCPEGIVAIAENTLRI 725
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 12/161 (7%)
Query: 32 YLAKCVLKGSVVL-QVAHGHLRS-PTSNDVVFGKETSIELVIIG-EDGIVQSVCEQAVFG 88
YL L+GS + Q HG P +V + ++L+ + G + +C FG
Sbjct: 2 YLYNLTLQGSSAINQAIHGSFCGLPKQQEVCIARGNLLQLLFCDPKTGKIHVLCSHNAFG 61
Query: 89 TIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
I+ L KD +V+ SD+G++ L + + F V Q G
Sbjct: 62 IIRSLLAFRLTGG---------SKDYIVIGSDAGRIVILEYNAQKVCFERVHQETFGKTG 112
Query: 149 NSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
R G+ LAVD G I + A E + ++ ++ + +++
Sbjct: 113 CRRIVPGQFLAVDPKGRAILIGAVERQKLVYIMNRDASANL 153
>gi|403415203|emb|CCM01903.1| predicted protein [Fibroporia radiculosa]
Length = 1267
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 82/202 (40%), Gaps = 37/202 (18%)
Query: 466 QNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTW 525
+NIAPI+D +VD + Q+ AC G G+L+IIR+G ++ I + +T W
Sbjct: 456 ENIAPIMDAVMVDLDGSGQPQIIACSGGRNSGALKIIRTGADFQEQAVIRGI-ENVTDIW 514
Query: 526 TVRMKVSDPYHSFLVLSFVEETRVL----RVGLNFTDVTDSVGFRPDVCTLACG------ 575
+R D S L+ + + ET V R + D +D GF TLA G
Sbjct: 515 PIRSHYEDIIDSHLIATTLHETLVFSLDGRNAVTHMDPSDH-GFITRSPTLAVGNIPRRA 573
Query: 576 -----------LVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLG 624
V L++Q+ Q VR+ + H + L PV W
Sbjct: 574 TTQNGGRVVSSYVDSSLVLQVSQEKVRV-----IEHDAALGLFVPVGDGW---------D 619
Query: 625 AVAHNMIIVSTSNPCFLFILGV 646
A IV+ + F+LG+
Sbjct: 620 ATKEGRTIVAAAINSSQFVLGL 641
>gi|341884150|gb|EGT40085.1| CBN-DDB-1 protein [Caenorhabditis brenneri]
Length = 1134
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 39/232 (16%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
NI PI DM +V+ + + Q+ C G +GSLR+IR+GI +E+L G+ G +
Sbjct: 351 NIGPIRDMIMVE--SDGQPQLVTCSGAEKDGSLRVIRNGIGIEELATVD--LPGVVGIFP 406
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRV-GLNFTDVTDSVGFRPDVCTLACGLV----ADGL 581
+R+ S +++++S VEET VL++ G DV + + T+ G + GL
Sbjct: 407 IRLDSS--ADNYVIVSLVEETHVLQITGEELEDV-QFLQIDTALPTMFAGTLFGPNDSGL 463
Query: 582 LVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP---EHVS-ISLGAVAHNMIIVSTSN 637
+VQ+ + VRL +GG+ W P E +S +++ AV+ + + + +
Sbjct: 464 VVQVTERQVRLM------SNGGL------SKFWEPANGEMISKVAVNAVSGQVCVAARDH 511
Query: 638 ----PCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
C + +G +SV I E Q + E++C+ I + + K ++
Sbjct: 512 VYFLSCIVDEMGALDISV----IAEKQ---FEDEIACLDISNEGDDADKPAT 556
>gi|425777692|gb|EKV15851.1| UV-damaged DNA binding protein, putative [Penicillium digitatum
Pd1]
gi|425779888|gb|EKV17916.1| UV-damaged DNA binding protein, putative [Penicillium digitatum
PHI26]
Length = 1140
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLS-ECLYKGPPCKALLWVEGRFLS 441
+WE + + + D G F + + G E L K L+++ G L
Sbjct: 292 AWEKVDSQ--RWLLADDYGRLFFLSFILNNLGEIDDWKLESLGKTARASVLVYLGGGMLF 349
Query: 442 AFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFAC 490
GD VL+ + + NIAPILD +++D + + ++
Sbjct: 350 VGSHHGDSQVLRLDGTSFEVIQTLSNIAPILDFTIMDLGNRTNESQTHEFSSGQARIVTG 409
Query: 491 CGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
G +G+LR +RSG+ +E L + + I+ W ++ + + Y L+++FV+ETRV
Sbjct: 410 SGAFDDGTLRSLRSGVGMEDLGVLGEM-EHISDLWGLQTRSTGDYLDTLIVTFVDETRVF 468
Query: 551 R 551
+
Sbjct: 469 Q 469
>gi|295667673|ref|XP_002794386.1| DNA damage-binding protein 1a [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286492|gb|EEH42058.1| DNA damage-binding protein 1a [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1195
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 17/225 (7%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLS-ECLYKGPPCKALLWVEGRFLS 441
+WE + + + D G F + + D + L P L+++ G
Sbjct: 333 AWEQVDGQ--RWLLADDYGRLFFLMLILDEDNAVQSWKLDLLGNIPRASVLVYLGGGVTF 390
Query: 442 AFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY---------HDEKRDQ--MFAC 490
GD +++ G NIAPILD +++D HD Q +
Sbjct: 391 IGSHQGDSQLIRITEGSFEVIQTFSNIAPILDFTIMDLGGRAGENQTHDFSSGQARIVTG 450
Query: 491 CGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
G +GSLR +RSG+ +E++ + + IT W +R+ + + L++SFV+E+RV
Sbjct: 451 SGAFDDGSLRSVRSGVGMEEVGVLGAM-EHITDLWALRVACQEGFSDTLLVSFVDESRVF 509
Query: 551 RVGLN--FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLC 593
+ + + +G TL + +G ++Q+ + VR+
Sbjct: 510 HFTQDGEVEEKDEFMGLGLAESTLLAANLPNGRILQVTERNVRVA 554
>gi|328869269|gb|EGG17647.1| CPSF domain-containing protein [Dictyostelium fasciculatum]
Length = 1194
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 30/155 (19%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTA--- 515
LV T+ I +++PI+D V D E QM+A GV+ +LR++R G+ + +++ +
Sbjct: 387 LVLTATISSLSPIVDFKVADLAQEGTPQMYALSGVSERANLRVLRHGLPITQMVDSQLPG 446
Query: 516 -----------------PIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTD 558
P YQGI GT V P ++V+SFV T VL VG +
Sbjct: 447 TPAGIWTIPQSLTTMRNPQYQGI-GT------VESPADRYIVVSFVGSTLVLGVGETVEE 499
Query: 559 VTDSVGFRPDVCTLACGLVADGL--LVQIHQNAVR 591
V DS G T+ + L +VQI +R
Sbjct: 500 VQDS-GILSTTTTILIRSMGANLDSIVQIFAQGIR 533
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%)
Query: 819 DELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPS 878
D L + + TR +G P+ + ++ALS R W+ + T +S +P
Sbjct: 690 DGLTGEISDMRTRILGRRPIKFFRVKIKGSPAVLALSTRVWMCYSNLGRYEITPLSVEPL 749
Query: 879 THATPVCSVECPKGILFVAENSLNL 903
HA + S +CP+GI+ +EN+L +
Sbjct: 750 DHAASLSSDQCPEGIVATSENNLKI 774
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 32 YLAKCVL-KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
YL L K + + Q G+ + +++ ++EL+ + G + V FG I
Sbjct: 2 YLYNLTLQKSTAIFQSVSGNFSGSKAVEIIVSNGHALELLRPDDSGRLDHVLYSEAFGVI 61
Query: 91 KDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS 150
+ +A P+ + KD L+V SDSG++ L + + F V Q G
Sbjct: 62 RSIA--PFRLTGGS-------KDYLIVGSDSGRVVILEYNPSKNVFEKVHQETFGRSGCR 112
Query: 151 RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDI 189
R G+ ++ D G + A E + ++ L+ S + +
Sbjct: 113 RIVPGQYISTDPKGRAFMIGAIEKQKLVYILNRDSQAKL 151
>gi|409078983|gb|EKM79345.1| hypothetical protein AGABI1DRAFT_39860 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1236
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 449 GMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISL 508
G +++ L +NIAPILD +VD D + Q+ C G GS+ +R+G
Sbjct: 450 GNIVETRGSYLNVLERFKNIAPILDACLVD-PDSGQRQIVTCSGGKNTGSINAVRNGADF 508
Query: 509 EKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPD 568
E+++ P + W ++ ++ + SFL+LSF + ++++ D D++ F P
Sbjct: 509 EEIVNI-PGVPHVLKIWALKSRLEEAEDSFLLLSFCNSSSLIKI----NDSGDNISFAPF 563
Query: 569 VCTLACGLV 577
+A GLV
Sbjct: 564 DNAIASGLV 572
>gi|302423344|ref|XP_003009502.1| DNA damage-binding protein 1b [Verticillium albo-atrum VaMs.102]
gi|261352648|gb|EEY15076.1| DNA damage-binding protein 1b [Verticillium albo-atrum VaMs.102]
Length = 1119
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 17/141 (12%)
Query: 458 RLVYTSPIQNIAPILDMSVVDYHD-----------EKRDQMFACCGVAPEGSLRIIRSGI 506
RL+ T P NIAPILD S++D + + ++ A CGV GSLR IRS +
Sbjct: 367 RLIQTIP--NIAPILDFSIMDLGNAGDSGVGNAFSSGQARIVAGCGVHHNGSLRSIRSSV 424
Query: 507 SLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGL--NFTDVTDSVG 564
LE + I Q + G ++++ S+ + LV+SF+ ETRV + + ++ D G
Sbjct: 425 GLEDIGILDGI-QDVRGLFSLKSYGSEKVDT-LVVSFITETRVFKFDAYGSVEELADFQG 482
Query: 565 FRPDVCTLACGLVADGLLVQI 585
D TL G +A+G +QI
Sbjct: 483 LTLDQPTLFAGSLANGHTLQI 503
>gi|393212467|gb|EJC97967.1| hypothetical protein FOMMEDRAFT_162310 [Fomitiporia mediterranea
MF3/22]
Length = 1161
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 428 PCKALLWVEGRFLSAFVEMGDGMVLKEENGR------LVYTSPIQNIAPILDMSVVDYHD 481
P +L + +++ GD +++ + R L + +NIAPI+D D D
Sbjct: 335 PPTSLTPLASQYIYVGSHFGDSQLIRVTSERSSNGSYLEISDTFKNIAPIMDAVFEDTDD 394
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVL 541
+ + C G GSLR+IR+G + + R I ITG W +R + D +H ++++
Sbjct: 395 SGQPTIITCSGGESTGSLRVIRNGANFNEDARIEGI-ANITGMWPIRRQYDDTFHHYMLV 453
Query: 542 SFVEETRVLRV 552
+ T +L +
Sbjct: 454 TTDTNTHLLEL 464
>gi|395330962|gb|EJF63344.1| hypothetical protein DICSQDRAFT_153890 [Dichomitus squalens
LYAD-421 SS1]
Length = 1263
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 31/236 (13%)
Query: 448 DGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGIS 507
+G V+ + L NIAPI+D ++ D + Q+ G GSLR+IR+
Sbjct: 446 EGRVVNTQGTFLEVLQNFDNIAPIMDAALADIDGSGQPQVITSSGGRNTGSLRVIRTEAD 505
Query: 508 LEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLR--------------VG 553
++ R + G+T W V+ ++P H+ LV+S + ET V G
Sbjct: 506 FQEQARLDGLI-GVTDIWPVKTHSAEPIHTHLVVSTLRETHVFAFEGKDAIAHLDPSVAG 564
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVA---DGLLVQIHQNAVRLC--MPTMVAHSGGIPLSY 608
T +G P A G + L+VQI ++L PT+ A
Sbjct: 565 FTTHAPTFVLGNIPRRVVSASGTSSYEHSSLVVQITSEGIQLVEYEPTLFAFG------- 617
Query: 609 PVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRL 664
V W+P+ V G A I+ + +P F++G+ ++ + + + ++L
Sbjct: 618 KVGPGWYPKQVG---GEYAGREIVAAAMSPS-QFVVGLSGGRLALFNLGQKDTVQL 669
>gi|90108802|pdb|2B5N|A Chain A, Crystal Structure Of The Ddb1 Bpb Domain
gi|90108803|pdb|2B5N|B Chain B, Crystal Structure Of The Ddb1 Bpb Domain
gi|90108804|pdb|2B5N|C Chain C, Crystal Structure Of The Ddb1 Bpb Domain
gi|90108805|pdb|2B5N|D Chain D, Crystal Structure Of The Ddb1 Bpb Domain
Length = 323
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 145/386 (37%), Gaps = 92/386 (23%)
Query: 520 GITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVAD 579
GI G W +R + + LVLSFV +TRVL + + T+ +GF D T CG VA
Sbjct: 20 GIKGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAH 79
Query: 580 GLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNP 638
L+QI +VRL A + + W P+ +IS+ + + ++V+
Sbjct: 80 QQLIQITSASVRLVSQEPKA----------LVSEWKEPQAKNISVASCNSSQVVVAVGRA 129
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
+ L + E+ ++ H ++ E++C+ I +P+ SN P
Sbjct: 130 LYY-------LQIHPQELRQISHTEMEHEVACLDI-----------TPLG-DSNGLSPLC 170
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRL-V 757
G+ + I PS E+L + + G I IP+ + +
Sbjct: 171 AIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-------------IPRSILMTT 209
Query: 758 LADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFES 817
Y+L L +G L F NI +G+ +
Sbjct: 210 FESSHYLLCALGDGALFYFGL-------------------------NIETGLLS------ 238
Query: 818 KDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQP 877
D + L G P L ++ A SDRP ++ ++ H L +++++ +
Sbjct: 239 -DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKE 289
Query: 878 STHATPVCSVECPKGILFVAENSLNL 903
+ P+ S P + ++L +
Sbjct: 290 VNYMCPLNSDGYPDSLALANNSTLTI 315
>gi|392566425|gb|EIW59601.1| hypothetical protein TRAVEDRAFT_167065 [Trametes versicolor
FP-101664 SS1]
Length = 1263
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 44/233 (18%)
Query: 444 VEMGDGMVLKEENGRLVYTSPI--------QNIAPILDMSVVDYHDEKRDQMFACCGVAP 495
+++ DG+V GR++ T N+API+D + D + Q+ G
Sbjct: 436 MDLDDGLV---REGRVIQTKGTYLEVLQTHDNVAPIMDAVLADIDGSGQPQVITASGARN 492
Query: 496 EGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN 555
GSLR+IR+ ++ + + GIT W VR + +D H+ LV+S ET VL
Sbjct: 493 TGSLRVIRTEADFQEQAKLDGL-PGITDIWPVRPRFNDATHTHLVVSTSRETLVLSFAGQ 551
Query: 556 --FTDVTDSV-GFRPDVCTLACG-----------------LVADGLLVQIHQNAVRLCM- 594
T V SV GF V T A G V L+ QI VRL
Sbjct: 552 DTITHVEPSVAGFATHVPTYAIGNVPRRQTTTSGGRTTSSYVDSPLVAQITSEGVRLVEY 611
Query: 595 -PTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGV 646
PT+ + P W+P+ + ++A I+ + +P F++G+
Sbjct: 612 DPTLNGFT-------PFGAGWYPKKSGDA--SMAGRDIVAAAMSPS-QFVVGL 654
>gi|322700871|gb|EFY92623.1| DNA damage-binding protein 1 [Metarhizium acridum CQMa 102]
Length = 1121
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 29/172 (16%)
Query: 441 SAFVEMGDGMV-LKEENGR------------LVYTSPIQNIAPILDMSVVDYHDEKRDQM 487
S+ V MGD M+ L +G +V + N APILD +++D + + D
Sbjct: 285 SSLVYMGDDMLFLASHHGDSQLLRIDIDAQVMVLVKTLSNNAPILDFAIMDMGNREGDSQ 344
Query: 488 F------------ACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPY 535
F A CG +GSLR IRSG+ LE I Q G +T+R S
Sbjct: 345 FGNAFSSGQARIVAGCGAYHDGSLRSIRSGVGLEDQGILDEI-QDTKGLFTLRSHESSHV 403
Query: 536 HSFLVLSFVEETRVLRV--GLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
+ LV+S V +TRVLR + +V G D+ TL ++DG L+Q+
Sbjct: 404 DT-LVVSSVADTRVLRFDSAGDIEEVYAFQGLTLDMETLLAVNISDGRLLQV 454
>gi|430814207|emb|CCJ28534.1| unnamed protein product [Pneumocystis jirovecii]
Length = 904
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 393 KMVFCVDTGEFFMIEIAFG-SDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMV 451
K + D G FM+ ++ D + + +S+ + L+++ +L GD +
Sbjct: 102 KHILADDYGRIFMLTLSNSYKDSNFMKISQ-IGITSIASVLVYLPNSYLFIGSHYGDSQL 160
Query: 452 LKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL 511
+ + ++ + P NI+PI D V + + + + C G +GSLRI+R + + K
Sbjct: 161 VNIPDCLVLQSFP--NISPISDFCFVT-REGRNEFIVTCSGAYKDGSLRILRYNVEMNKT 217
Query: 512 LRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRV 552
L + + GI G W + ++ Y + LVLSFV ETR+L+V
Sbjct: 218 LEISNL-NGIYGIWGLYLQNEFEYTA-LVLSFVNETRILKV 256
>gi|308477185|ref|XP_003100807.1| CRE-DDB-1 protein [Caenorhabditis remanei]
gi|308264619|gb|EFP08572.1| CRE-DDB-1 protein [Caenorhabditis remanei]
Length = 1154
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 39/229 (17%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
NI PI DM +V+ + + Q+ C G +GSLR+IR+GI +E+L G+ G +
Sbjct: 351 NIGPIRDMIMVE--SDGQAQLVTCSGAEKDGSLRVIRNGIGIEELASVE--LAGVIGIFP 406
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRV-GLNFTDVTDSVGFRPDVCTLACGLVADGL---- 581
+R+ + +++++S EET VL++ G DV +CT + A +
Sbjct: 407 IRLNSTT--DNYVIVSLAEETHVLQINGEELEDVQ-----LLQICTEMPTIFASTIFGPD 459
Query: 582 ----LVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFP---EHVS-ISLGAVAHNMIIV 633
L+Q+ + VR +A SG + W P E +S +S+ A+ H I+V
Sbjct: 460 NSEVLLQVTEKHVRF-----MAFSG-------LSKIWEPPNGELISKVSVNAI-HGQIVV 506
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRK 682
+ + + + + + +I + + + E++C+ I + + K
Sbjct: 507 AARDTVYFLLCVIEEM--GGLDINLVAERKFEDEIACLDISNEGDDHTK 553
>gi|168021793|ref|XP_001763425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685218|gb|EDQ71614.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1452
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 21/153 (13%)
Query: 459 LVYTSPIQNIAPIL----DMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
LV P+++ A L D S + ++ AC G GSL ++ I + + +
Sbjct: 523 LVNICPLRDFAYGLRSNADQSATGLGKQSNYELVACSGHGKNGSLSVLHQSIRPDLINKV 582
Query: 515 APIYQGITGTWTVRMKVS--------------DPYHSFLVLSFVEETRVLRVGLNFTDVT 560
A G +G WTV K D +H++L++S T VL G +VT
Sbjct: 583 A--LPGCSGIWTVYHKTDRDDSNEFDFGTSEDDEFHAYLIISLESRTMVLETGDTLGEVT 640
Query: 561 DSVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
++V + + T+A G L +VQ++QN +RL
Sbjct: 641 ENVEYYTEGNTIAAGNLFGRRFVVQVYQNGLRL 673
>gi|346970653|gb|EGY14105.1| hypothetical protein VDAG_00787 [Verticillium dahliae VdLs.17]
Length = 1160
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 17/141 (12%)
Query: 458 RLVYTSPIQNIAPILDMSVVDYHD-----------EKRDQMFACCGVAPEGSLRIIRSGI 506
RL+ T P NIAPILD S++D + + ++ A CGV GSLR IRS +
Sbjct: 367 RLIQTIP--NIAPILDFSIMDLGNAGDSGVGNAFSSGQARIVAGCGVHHNGSLRSIRSSV 424
Query: 507 SLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVG 564
LE + I Q + G ++++ S+ + LV+SF+ ETRV + + ++T G
Sbjct: 425 GLEDIGILDDI-QDVRGLFSLKSYGSEKVDT-LVVSFLTETRVFKFDADGGVEELTAFQG 482
Query: 565 FRPDVCTLACGLVADGLLVQI 585
D TL G +A+G +QI
Sbjct: 483 LTLDQPTLFAGSLANGHTLQI 503
>gi|452979181|gb|EME78944.1| hypothetical protein MYCFIDRAFT_43692 [Pseudocercospora fijiensis
CIRAD86]
Length = 1149
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 106/257 (41%), Gaps = 29/257 (11%)
Query: 436 EGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD---------- 485
EGR GD V++ R+ NIAPILD +V+D + D
Sbjct: 343 EGRVFVG-SHQGDSQVIQISPKRIDVLQSFPNIAPILDFTVMDMGNRSLDAPVNEFSSGQ 401
Query: 486 -QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFV 544
++ G +GSLR +RSG+ LE + I+ +++R + Y L++S V
Sbjct: 402 ARIVTGSGAFNDGSLRSVRSGVGLEDRGSLGDLGAPISSIFSLRTSAAAQYVDTLIVSHV 461
Query: 545 EETRVLRVGLNFT-DVTDSV-GFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSG 602
T V+ + + DS GF TL G + DG VQ+ ++V L G
Sbjct: 462 SHTNVVVFTEDGDIEARDSFRGFELKDATLFAGDLRDGRAVQVTSSSVLLT-----DSEG 516
Query: 603 GIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQH 661
+ V W P SI+ A I+VS +L V LS S+ ++ +
Sbjct: 517 DM-----VTDRWQAPSGTSITAVAADGEKILVSLQGA----VLVVLDLSASNIQVQAERK 567
Query: 662 MRLQSELSCISIPQKHP 678
+ ++SCI++ P
Sbjct: 568 FGSEEQVSCIALSPSIP 584
>gi|194381178|dbj|BAG64157.1| unnamed protein product [Homo sapiens]
Length = 826
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 144/386 (37%), Gaps = 92/386 (23%)
Query: 520 GITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVAD 579
GI G W +R + LVLSFV +TRVL + + T+ +GF D T CG VA
Sbjct: 92 GIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAH 151
Query: 580 GLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF-PEHVSISLGAVAHNMIIVSTSNP 638
L+QI +VRL A + + W P+ +IS+ + + ++V+
Sbjct: 152 QQLIQITSASVRLVSQEPKA----------LVSEWKEPQAKNISVASCNSSQVVVAVGRA 201
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPAL 698
+ L + E+ ++ H ++ E++C+ I +P+ SN P
Sbjct: 202 LYY-------LQIHPQELRQISHTEMEHEVACLDI-----------TPLG-DSNGLSPLC 242
Query: 699 PAGVIIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRL-V 757
G+ + I PS E+L + + G I IP+ + +
Sbjct: 243 AIGLWTDISARI-LKLPSFELLH-------KEMLGGEI-------------IPRSILMTT 281
Query: 758 LADQFYVLAGLRNGMLLRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFES 817
Y+L L +G L F NI +G+ +
Sbjct: 282 FESSHYLLCALGDGALFYFGL-------------------------NIETGLLS------ 310
Query: 818 KDELPINLQLIATRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQP 877
D + L G P L ++ A SDRP ++ ++ H L +++++ +
Sbjct: 311 -DRKKVTL--------GTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKE 361
Query: 878 STHATPVCSVECPKGILFVAENSLNL 903
+ P+ S P + ++L +
Sbjct: 362 VNYMCPLNSDGYPDSLALANNSTLTI 387
>gi|261193401|ref|XP_002623106.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588711|gb|EEQ71354.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis SLH14081]
Length = 1168
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 97/228 (42%), Gaps = 22/228 (9%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLS-ECLYKGPPCKALLWVEGRFLS 441
+WE + + + D G F + + SD + L P L+++ G
Sbjct: 340 AWEQVDGQ--RWLLADDYGRLFFLMLILDSDNAVQSWKLDRLGNIPRASVLVYMGGGVTF 397
Query: 442 AFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY----------HDEKRDQ--MFA 489
GD +++ G NIAPILD +++D H+ Q +
Sbjct: 398 IGSHQGDSQLIRITEGSFEVIQTFANIAPILDFTIMDLGGRAMGESQTHEFSSGQARIVT 457
Query: 490 CCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRV 549
G +GSLR +RSG+ +E++ + + IT W +R+ + + L++SFV+ETRV
Sbjct: 458 GSGAFNDGSLRSVRSGVGMEEVGVLGSM-EHITDLWALRVACPEEFSDTLLVSFVDETRV 516
Query: 550 LRV----GLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLC 593
G+ D + +G TL + +G ++Q+ + VR+
Sbjct: 517 FYFTPDGGVEEKD--EFMGLGLTESTLIAANLPNGRILQVTERNVRVA 562
>gi|239613967|gb|EEQ90954.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis ER-3]
gi|327353314|gb|EGE82171.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis ATCC
18188]
Length = 1199
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 97/228 (42%), Gaps = 22/228 (9%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLS-ECLYKGPPCKALLWVEGRFLS 441
+WE + + + D G F + + SD + L P L+++ G
Sbjct: 340 AWEQVDGQ--RWLLADDYGRLFFLMLILDSDNAVQSWKLDRLGNIPRASVLVYMGGGVTF 397
Query: 442 AFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY----------HDEKRDQ--MFA 489
GD +++ G NIAPILD +++D H+ Q +
Sbjct: 398 IGSHQGDSQLIRITEGSFEVIQTFANIAPILDFTIMDLGGRAMGESQTHEFSSGQARIVT 457
Query: 490 CCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRV 549
G +GSLR +RSG+ +E++ + + IT W +R+ + + L++SFV+ETRV
Sbjct: 458 GSGAFNDGSLRSVRSGVGMEEVGVLGSM-EHITDLWALRVACPEEFSDTLLVSFVDETRV 516
Query: 550 LRV----GLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLC 593
G+ D + +G TL + +G ++Q+ + VR+
Sbjct: 517 FYFTPDGGVEEKD--EFMGLGLTESTLIAANLPNGRILQVTERNVRVA 562
>gi|302894051|ref|XP_003045906.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256726833|gb|EEU40193.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1162
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 17/156 (10%)
Query: 454 EENGRLVYTSPIQNIAPILDMSVVDYHDEKRD------------QMFACCGVAPEGSLRI 501
E N L+ S + N APILD S++D + + D ++ A CG +GSLR
Sbjct: 372 ETNAMLLIKS-LSNNAPILDFSIMDMGNREGDAQAGNAFSSGQSRIVAGCGAYQDGSLRS 430
Query: 502 IRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDV 559
IRSG+ LE+ + G G +T+R SD + LV+S + ETR+L + ++
Sbjct: 431 IRSGVGLEERGILDEL-DGTRGLFTLRSYNSDLVDT-LVVSSITETRILSFDTDGGIEEI 488
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMP 595
G D TL + +G L+QI +V L P
Sbjct: 489 YSFQGMEQDTETLLASNLPNGQLLQITPKSVVLLDP 524
>gi|325189779|emb|CCA24259.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 1911
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 29/189 (15%)
Query: 481 DEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTV--------RMKVS 532
+E+ +++ G + +GS+ +I G L ++ TA G WTV +V+
Sbjct: 747 NEQHEELVVSGGSSKDGSISVIHHG--LRPIVSTAAELSGCRAMWTVVGMSSDVPESQVT 804
Query: 533 DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFR---PDVCTLACGLVADGLLVQIHQNA 589
Y S+L+LS + T +LR G + D GF P +C A L + +VQ+ +
Sbjct: 805 RRYDSYLILSVAQRTMILRTGEEMEPLEDDSGFYTCGPTLC--ATNLFSQRRIVQVFKQG 862
Query: 590 VRLCMPTMVAHSGG---------IPLSYPVCTSWFPEHVSISLGAV---AHNMIIVS--T 635
VR+ + S +PL+ VCT P I G + N+ IVS T
Sbjct: 863 VRVMQQASIPASEAKEDDEGTQDVPLTRLVCTQEIPFAGDIESGGMNVDTANVGIVSVDT 922
Query: 636 SNPCFLFIL 644
+P L +L
Sbjct: 923 IDPYILLLL 931
>gi|389629928|ref|XP_003712617.1| hypothetical protein MGG_16867 [Magnaporthe oryzae 70-15]
gi|351644949|gb|EHA52810.1| hypothetical protein MGG_16867 [Magnaporthe oryzae 70-15]
gi|440464739|gb|ELQ34110.1| DNA damage-binding protein 1a [Magnaporthe oryzae Y34]
Length = 1183
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 465 IQNIAPILDMSVVDYHDEKRD------------QMFACCGVAPEGSLRIIRSGISLEKLL 512
I+NIAPILD +V+D + + D ++ G +GSLR +RSG+ LE +
Sbjct: 387 IENIAPILDFAVMDMGNREGDSQLGNEYSSGQARIVTASGAQKDGSLRSVRSGVGLEDIG 446
Query: 513 RTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLR 551
G+TG ++++ SD + LV+SF+ ETRV R
Sbjct: 447 VITDEISGVTGLFSLKSYGSDVEDT-LVVSFLTETRVFR 484
>gi|325187036|emb|CCA21579.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 1912
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 29/189 (15%)
Query: 481 DEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTV--------RMKVS 532
+E+ +++ G + +GS+ +I G L ++ TA G WTV +V+
Sbjct: 748 NEQHEELVVSGGSSKDGSISVIHHG--LRPIVSTAAELSGCRAMWTVVGMSSDVPESQVT 805
Query: 533 DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFR---PDVCTLACGLVADGLLVQIHQNA 589
Y S+L+LS + T +LR G + D GF P +C A L + +VQ+ +
Sbjct: 806 RRYDSYLILSVAQRTMILRTGEEMEPLEDDSGFYTCGPTLC--ATNLFSQRRIVQVFKQG 863
Query: 590 VRLCMPTMVAHSGG---------IPLSYPVCTSWFPEHVSISLGAV---AHNMIIVS--T 635
VR+ + S +PL+ VCT P I G + N+ IVS T
Sbjct: 864 VRVMQQASIPASEAKEDDEGTQDVPLTRLVCTQEIPFAGDIESGGMNVDTANVGIVSVDT 923
Query: 636 SNPCFLFIL 644
+P L +L
Sbjct: 924 IDPYILLLL 932
>gi|380481704|emb|CCF41690.1| CPSF A subunit region, partial [Colletotrichum higginsianum]
Length = 932
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 432 LLWVEGRFLSAFVEMGDGMV---------------LKEENGRLVYTSPIQNIAPILDMSV 476
LL V R S V MG+G++ ++ RLV T P +IAPILD S+
Sbjct: 281 LLGVTSR-ASCLVHMGNGLLFLGSHYGDSQLLQINMESLKTRLVQTIP--SIAPILDFSI 337
Query: 477 VDYHDEKRDQ-----------MFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTW 525
+D + Q + A CGV GSLR IRS + LE + + Q + G +
Sbjct: 338 MDLGNAGDSQVGNAFSSGQARIVAGCGVHQNGSLRSIRSSVGLEDIGVLEDL-QDVRGLF 396
Query: 526 TVRMKVSDPYHSFLVLSFVEETRVLRVG--LNFTDVTDSVGFRPDVCTLACGLVADGLLV 583
++R S P LV+SF+ ETR+ +V + G D TL + DG L+
Sbjct: 397 SLRSHGS-PKVDTLVVSFITETRIFSFDPEGGIEEVFEFQGLALDRPTLVATTLPDGRLL 455
Query: 584 QIHQNAVRLC 593
Q+ V L
Sbjct: 456 QVTSTTVTLL 465
>gi|440487047|gb|ELQ66855.1| DNA damage-binding protein 1a [Magnaporthe oryzae P131]
Length = 1213
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 465 IQNIAPILDMSVVDYHDEKRD------------QMFACCGVAPEGSLRIIRSGISLEKLL 512
I+NIAPILD +V+D + + D ++ G +GSLR +RSG+ LE +
Sbjct: 417 IENIAPILDFAVMDMGNREGDSQLGNEYSSGQARIVTASGAQKDGSLRSVRSGVGLEDIG 476
Query: 513 RTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLR 551
G+TG ++++ SD + LV+SF+ ETRV R
Sbjct: 477 VITDEISGVTGLFSLKSYGSDVEDT-LVVSFLTETRVFR 514
>gi|219125301|ref|XP_002182922.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217405716|gb|EEC45658.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 1284
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 104/254 (40%), Gaps = 57/254 (22%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVV-------------DYHDEKRDQMFACCGVAPEGSLRI 501
E+ L ++ PILD +V H + Q+ G + GSLR+
Sbjct: 397 ESSYLSVVEEYTHLGPILDFDLVPTAPGGGGLGQTEGIHGPSQSQVVTASGSSKSGSLRL 456
Query: 502 IRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTD 561
IR+GI + + A GI W++R +D ++LV SFV ETRVL V D++
Sbjct: 457 IRNGIGMNE--SAAVEIPGIQNVWSLRRSFADVDDTYLVQSFVHETRVLGV-TTMDDMSQ 513
Query: 562 S-----------------VGFRPDVCTLACGLV---ADGLLVQIHQNAVRLCMPTMVAHS 601
+G + TL G V +GLL QI + VR TM A
Sbjct: 514 DEKEGDVAPGGTLEEVFLIGLKSSCATLYVGNVQAHQNGLL-QITEGEVRFA--TMEA-- 568
Query: 602 GGIPLSYPVCTSWF-PEHVSISLG-AVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEM 659
V +W P +I++G A I V+ + L+ L + +I E
Sbjct: 569 --------VLDTWLVPSGAAITVGTANEAGQIAVALNGGKVLY------LKIEEGKIREC 614
Query: 660 QHMRLQSELSCISI 673
+++ E+SC+++
Sbjct: 615 SGQQMEREVSCLNL 628
>gi|212539802|ref|XP_002150056.1| UV-damaged DNA binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210067355|gb|EEA21447.1| UV-damaged DNA binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 1139
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 399 DTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFLSAFVEMGDGMVLKEEN 456
D G F + + S ++V + Y G +A L+++ GD V++
Sbjct: 303 DYGRLFFLMLVLDSQ-NEVEGWKLDYLGEASRASVLIYLGAGMTFIGSHQGDSQVIRISE 361
Query: 457 GRLVYTSPIQNIAPILDMSVVD--------YHDE---KRDQMFACCGVAPEGSLRIIRSG 505
G I NIAPILD +++D Y E + ++ G +G+LR +RSG
Sbjct: 362 GSFEIIQTISNIAPILDFTIMDLGAREGENYTHEFSSGQARIVTGSGAFNDGTLRSVRSG 421
Query: 506 ISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLR 551
+ +++L + + IT W +++ + LV++FV ETRV R
Sbjct: 422 VGMDELGVLGEM-EHITDMWALQISSPGDFSDTLVVTFVNETRVFR 466
>gi|342885673|gb|EGU85655.1| hypothetical protein FOXB_03801 [Fusarium oxysporum Fo5176]
Length = 1160
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 34/264 (12%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRD------------QMFACCGVAPEGSLRII 502
E+ + N APILD S++D + + D ++ A CG +GSLR I
Sbjct: 372 ESATVTLVQSFSNNAPILDFSIMDMGNREGDAQAGNAFSSGQSRIVAGCGAYRDGSLRSI 431
Query: 503 RSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL---RVGLNFTDV 559
RSG+ LE + +G G +T+R SD + LV+S + ETRVL R G ++
Sbjct: 432 RSGVGLEDRGVLDEL-EGTRGLFTLRSYGSDLVDT-LVVSAITETRVLSFDREG-GIEEI 488
Query: 560 TDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEH 618
G D TL + +G L+QI +V L P GG V + W P
Sbjct: 489 YSFQGMSLDTETLLASNLPNGQLLQITPRSVVLLDP-----EGGT-----VTSKWDVPSG 538
Query: 619 VSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHP 678
SI+ + ++S + + +++L+V + + + ++SCI + P
Sbjct: 539 KSITRASANSKWALLSVDGTSLVSLNLLQNLAV-NVQQSQNNSGSQADQISCIHAARDPP 597
Query: 679 ERRK----SSSPISLVSNSSVPAL 698
+ SS ISL+ +S+ L
Sbjct: 598 DLGVVGWWSSGQISLIDMASLKPL 621
>gi|223994993|ref|XP_002287180.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976296|gb|EED94623.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1517
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 20/117 (17%)
Query: 454 EENGRLVYTSPIQNIAPILDMSVVDYHD-------------EKRDQ-----MFACCGVAP 495
EE L N+ PI+D + D + RDQ + C GV
Sbjct: 508 EETTYLRLLDEYTNLGPIVDFDLRPCSDATSGGHGNAKNDSKSRDQHRQSLVVTCSGVGK 567
Query: 496 EGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRV 552
+G++R++R+G+ + + GI G W++R +D SFLV SFV ETR+L V
Sbjct: 568 DGTVRLVRNGVGMREHAEVE--MPGIKGMWSLRRTFADEDDSFLVQSFVRETRILGV 622
>gi|302761560|ref|XP_002964202.1| hypothetical protein SELMODRAFT_82277 [Selaginella moellendorffii]
gi|300167931|gb|EFJ34535.1| hypothetical protein SELMODRAFT_82277 [Selaginella moellendorffii]
Length = 1413
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 26/152 (17%)
Query: 467 NIAPILDMSVVDYHDEKR----DQMFACCGVAPEGSLRIIRSGISLE-------KLLRTA 515
NI PI D++ + ++ + ACCG GSL II I + LL A
Sbjct: 500 NIGPIRDITCRSQNPSEQPGSAQDLIACCGHGKNGSLNIISRSIRPDFITQANMSLLFFA 559
Query: 516 PIYQ--------GITGTWTVRMKV------SDPYHSFLVLSFVEETRVLRVGLNFTDVTD 561
Y G G WTV + D YH++L++S T VL G +VTD
Sbjct: 560 VAYALFFQVKLPGCVGVWTVYHRSGQIPAEKDEYHAYLIISLESRTMVLETGETLGEVTD 619
Query: 562 SVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
SV + + +++ G L + Q++Q VR+
Sbjct: 620 SVEYYTEGPSISAGNLFGRRRIAQVYQKGVRI 651
>gi|322706594|gb|EFY98174.1| DNA damage-binding protein 1 [Metarhizium anisopliae ARSEF 23]
Length = 1121
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMF------------ACCGVAPEGSLRIIRSGI 506
+V + N APILD +++D + + D F A CG +GSLR IRSG+
Sbjct: 316 MVVAKALSNNAPILDFAIMDMGNREGDSQFGNAFSSGQARIVAGCGAYHDGSLRSIRSGV 375
Query: 507 SLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRV--GLNFTDVTDSVG 564
LE I Q G +T+R S + LV+S V +TRVLR +V G
Sbjct: 376 GLEDQGILDEI-QDTKGLFTLRSHQSSHVDT-LVVSSVADTRVLRFDSAGGIEEVYAFQG 433
Query: 565 FRPDVCTLACGLVADGLLVQI 585
D+ TL ++DG L+Q+
Sbjct: 434 LTLDMETLLAVNISDGQLLQV 454
>gi|340521192|gb|EGR51427.1| predicted protein [Trichoderma reesei QM6a]
Length = 1161
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 129/575 (22%), Positives = 222/575 (38%), Gaps = 106/575 (18%)
Query: 53 SPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGK 112
SP D+V K +E+ + E+G+ + + + GTI L ++ ++S
Sbjct: 23 SPDIEDLVVAKANRLEIWRVHEEGMT-CLHTKVIHGTIDML------QRLQPKDS---AT 72
Query: 113 DLLVVISDSGKLSFLAFCNEMHRFFPVAQV--HLSNPGNSRHQLGRMLAVDSSGCLIAVS 170
DLL + +D + LA+ E ++ V Q + P + Q VD +G +A+
Sbjct: 73 DLLFIGTDRLQYFNLAWNPETNQLDAVEQTIEDTAEPYMRQSQSQNRCLVDPTGKFMAMH 132
Query: 171 AYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPR 230
+E L +F L + G + T + Q + + F+
Sbjct: 133 LWEGVLNVFRLRIRKG---------------LTTKLEGLDQVRLTELWMKASTFLY---- 173
Query: 231 QPSKEHNPILAIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGPLAHCVVEVPRSYG 290
S+ +P +A + N+L + E I+V + P + ++
Sbjct: 174 --SRTGHPTIAFLYK------NQL-----DREEARIAVYRLTEDDKPGVSSKFDPQKNRD 220
Query: 291 FAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPPALEEQNF---VDESCRVHDVDDEGLF 347
F V +RDP+ S+ P EE+ + +E R H GL
Sbjct: 221 FEEV----------IRDPY-------ASMLIPVPVYEEKRYHVRNNEGARAHL---GGLL 260
Query: 348 NVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIE 407
V L +D + S + EP +V +W+ E D + D G M+E
Sbjct: 261 VVGETLLTY---FDSLTYSSVCSSLAEPKIYV-AWA---EYDGT-HYLLADDYGRLDMLE 312
Query: 408 IAFGSD-------GHKVH---LSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKE--E 455
I ++ G +VH + +L+++ L GD +L+ E
Sbjct: 313 IKTTNESTGVVVTGMEVHPFAFEDLSRYTSRASSLVYMGNNLLFIGSHHGDSQLLRIDIE 372
Query: 456 NGRLVYTSPIQNIAPILDMSVVDYHDEKRD------------QMFACCGVAPEGSLRIIR 503
++ + N API+D +++D + + D ++ A CG +GSLR IR
Sbjct: 373 TQQMTLLKVLPNNAPIMDFTIMDLGNREGDAQAGNTFSSGQARIVAGCGAYQDGSLRSIR 432
Query: 504 SGISLEK--LLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG-LNFTDVT 560
SG+ LE LL P G G +T+R S+ + +V+S + TRVLR + +V
Sbjct: 433 SGVGLEDRGLLDEFP---GTRGLFTLRSVDSEKVDT-VVVSTLAGTRVLRFEPESIEEVY 488
Query: 561 DSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMP 595
G + TL + +G L+QI V L P
Sbjct: 489 SFQGMDLESETLLAANLPNGQLLQITPRVVTLLDP 523
>gi|395544366|ref|XP_003774082.1| PREDICTED: DNA damage-binding protein 1 [Sarcophilus harrisii]
Length = 1239
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 446 MGDGMVLK------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSL 499
+GD ++K E+ +V N+ PI+DM VVD + + Q+ C G EGSL
Sbjct: 333 LGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSL 392
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVR 528
RIIR+GI + + + GI G W +R
Sbjct: 393 RIIRNGIGIHE--HASIDLPGIKGLWPLR 419
>gi|167390599|ref|XP_001739420.1| DNA damage-binding protein [Entamoeba dispar SAW760]
gi|165896898|gb|EDR24200.1| DNA damage-binding protein, putative [Entamoeba dispar SAW760]
Length = 1088
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 431 ALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDE--KRDQMF 488
+L+++ L + GD ++K R +N PILDM+ + HDE +D +
Sbjct: 306 TILYLDNSVLFWGSKGGDSHLIKINEKRCEILETFENRGPILDMTAI--HDEITNKDDLL 363
Query: 489 ACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETR 548
CC +G+L++I SG+ ++ + + +GIT + V M + +L++S+ + ++
Sbjct: 364 MCCNTYQQGTLKLISSGVGIDIICQNE--MKGITHLYQVEMGNKE----YLIISYSDNSK 417
Query: 549 VLRV-----GLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
V L F ++ + GF T+ G++ G + +I
Sbjct: 418 VFESQQENNQLQFNEI-EIKGFNRKEETICSGIIEIGEMKEI 458
>gi|154286506|ref|XP_001544048.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407689|gb|EDN03230.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1158
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 125/318 (39%), Gaps = 34/318 (10%)
Query: 345 GLFNVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFF 404
GL + ++ L D CI S KE + V +WE + + + D G F
Sbjct: 267 GLLVLGETSIRYLDDASNECI---SQPLKEATIFV---AWEQVDGQ--RWLLADDYGRLF 318
Query: 405 MIEIAFGSDGHKVHLS-ECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTS 463
+ + +D + L P L+++ G GD +++ G
Sbjct: 319 FLMLVLDTDNAVQSWKLDLLGDIPRASVLVYMGGGITFIGSHQGDPELIRITEGSFEVIQ 378
Query: 464 PIQNIAPILDMSVVDY----------HDEKRDQ--MFACCGVAPEGSLRIIRSGISLEKL 511
NIAPILD +++D H+ Q + G +GSLR +RSG+ +E++
Sbjct: 379 TFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFNDGSLRTVRSGVGMEEV 438
Query: 512 LRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDV 569
+ + IT W +R+ + L++SFV+ETRV + + + +G
Sbjct: 439 GVLGAM-KHITDLWALRVACPQEFSDTLLVSFVDETRVFYFTPDGEVEEKEEFMGLGLAE 497
Query: 570 CTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHN 629
TL + G ++Q+ + VR+ GG+ V W PE A +++
Sbjct: 498 STLLAANLPHGRILQVTEWNVRVA-----ELDGGM-----VIWEWSPEQQKAITAASSND 547
Query: 630 MIIVSTSNPCFLFILGVR 647
+V L I +R
Sbjct: 548 DHLVLMVGGQVLMIFDIR 565
>gi|340960602|gb|EGS21783.1| hypothetical protein CTHT_0036510 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1100
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 109/236 (46%), Gaps = 40/236 (16%)
Query: 458 RLVYTSPIQNIAPILDMSVVDY------------HDEKRDQMFACCGVAPEGSLRIIRSG 505
RL QNI PILD +++D + + ++ C GV +G+LR +RSG
Sbjct: 310 RLQLIESFQNIGPILDFAIMDMGNRGDSGQPGNEYSSGQARIVTCSGVHKDGTLRSVRSG 369
Query: 506 ISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGL--NFTDVTDSV 563
+ LE + A + + G +++R S + LV+SF+ ETRV + + +++
Sbjct: 370 VGLEDIGILADL-ELCRGLFSLRSHGS-LKTNILVMSFLTETRVFKFDHQGDIEELSSFC 427
Query: 564 GFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISL 623
G D TL + G ++ + A T++ G+ + TSW PE
Sbjct: 428 GMTLDQQTLLAVDLPSGQILHVTPAAA-----TLLDTESGVAI-----TSWTPEE----- 472
Query: 624 GAVAHNMIIVSTSNPCFLFI----LGVRSLSVSH-YEIYEMQHMRLQSELSCISIP 674
II +++N +L + +G+ SLS+S+ I + +++ +++C+ +P
Sbjct: 473 ----GRCIINASANAEWLLLSVDGVGLVSLSLSNDLRILKEKNLNQSDQIACLHVP 524
>gi|302814354|ref|XP_002988861.1| hypothetical protein SELMODRAFT_184138 [Selaginella moellendorffii]
gi|300143432|gb|EFJ10123.1| hypothetical protein SELMODRAFT_184138 [Selaginella moellendorffii]
Length = 1413
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 26/152 (17%)
Query: 467 NIAPILDMSVVDYHDEKR----DQMFACCGVAPEGSLRIIRSGISLE-------KLLRTA 515
NI PI D++ + ++ + ACCG GSL II I + LL A
Sbjct: 500 NIGPIRDITGRSQNPSEQPGSAQDLIACCGHGKNGSLNIISRSIRPDFITQANMSLLFFA 559
Query: 516 PIYQ--------GITGTWTVRMKV------SDPYHSFLVLSFVEETRVLRVGLNFTDVTD 561
Y G G WTV + D YH++L++S T VL G +VTD
Sbjct: 560 VAYALFFQVKLPGCVGVWTVYHRSGQIPAEKDEYHAYLIISLESRTMVLETGETLGEVTD 619
Query: 562 SVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
SV + + +++ G L + Q++Q VR+
Sbjct: 620 SVEYYTEGPSISAGNLFGRRRIAQVYQKGVRI 651
>gi|440639387|gb|ELR09306.1| hypothetical protein GMDG_03874 [Geomyces destructans 20631-21]
Length = 1138
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 447 GDGMVLKEENGRLV--YTSPIQNIAPILDMSVVDY---HDEKRDQMFAC--------CGV 493
GD VLK + V + NIAPI+D +V+D +E R F+ G
Sbjct: 351 GDSQVLKLDLDAKVAEVVQTLDNIAPIVDFTVMDMGSRSEEARANEFSSGQARIVTGSGA 410
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLR 551
EGSLR +RSG+ LE + + + I G +T++ S+ +H LV+SF ETRV R
Sbjct: 411 FQEGSLRSVRSGVGLEDIGQLGEM-DNIKGLYTLQTNNSE-FHDTLVISFSTETRVFR 466
>gi|325094412|gb|EGC47722.1| DNA damage-binding protein 1a [Ajellomyces capsulatus H88]
Length = 1201
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 24/220 (10%)
Query: 345 GLFNVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSW-SWEPETDKIPKMVFCVDTGEF 403
GL + ++ L D CI +P K + +WE + + + D G
Sbjct: 310 GLLVLGETSIRYLDDASNECI-------SQPLKEATIFVAWEQVDGQ--RWLLADDYGRL 360
Query: 404 FMIEIAFGSDGHKVHLS-ECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYT 462
F + + +D + L P L+++ G GD +++ G
Sbjct: 361 FFLMLVLDTDNAVQSWKLDLLGDIPRASVLVYMGGGITFIGSHQGDSELIRITEGSFEVI 420
Query: 463 SPIQNIAPILDMSVVDY----------HDEKRDQ--MFACCGVAPEGSLRIIRSGISLEK 510
NIAPILD +++D H+ Q + G +GSLR +RSG+ +E+
Sbjct: 421 QTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFNDGSLRSVRSGVGMEE 480
Query: 511 LLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
+ + + IT W +R+ + L++SFV+ETRV
Sbjct: 481 VGVLGAM-KHITDLWALRVACPQEFSDTLLVSFVDETRVF 519
>gi|225558618|gb|EEH06902.1| DNA damage-binding protein 1a [Ajellomyces capsulatus G186AR]
Length = 1201
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 24/220 (10%)
Query: 345 GLFNVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSW-SWEPETDKIPKMVFCVDTGEF 403
GL + ++ L D CI +P K + +WE + + + D G
Sbjct: 310 GLLVLGETSIRYLDDASNECI-------SQPLKEATIFVAWEQVDGQ--RWLLADDYGRL 360
Query: 404 FMIEIAFGSDGHKVHLS-ECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYT 462
F + + +D + L P L+++ G GD +++ G
Sbjct: 361 FFLMLVLDTDNAVQSWKLDLLGDIPRASVLVYMGGGITFIGSHQGDSELIRITEGSFEVI 420
Query: 463 SPIQNIAPILDMSVVDY----------HDEKRDQ--MFACCGVAPEGSLRIIRSGISLEK 510
NIAPILD +++D H+ Q + G +GSLR +RSG+ +E+
Sbjct: 421 QTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFNDGSLRSVRSGVGMEE 480
Query: 511 LLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
+ + + IT W +R+ + L++SFV+ETRV
Sbjct: 481 VGVLGAM-KHITDLWALRVACPQEFSDTLLVSFVDETRVF 519
>gi|240275059|gb|EER38574.1| DNA damage-binding protein 1a [Ajellomyces capsulatus H143]
Length = 1134
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 24/220 (10%)
Query: 345 GLFNVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSW-SWEPETDKIPKMVFCVDTGEF 403
GL + ++ L D CI +P K + +WE + + + D G
Sbjct: 310 GLLVLGETSIRYLDDASNECI-------SQPLKEATIFVAWEQVDGQ--RWLLADDYGRL 360
Query: 404 FMIEIAFGSDGHKVHLS-ECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYT 462
F + + +D + L P L+++ G GD +++ G
Sbjct: 361 FFLMLVLDTDNAVQSWKLDLLGDIPRASVLVYMGGGITFIGSHQGDSELIRITEGSFEVI 420
Query: 463 SPIQNIAPILDMSVVDY----------HDEKRDQ--MFACCGVAPEGSLRIIRSGISLEK 510
NIAPILD +++D H+ Q + G +GSLR +RSG+ +E+
Sbjct: 421 QTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFNDGSLRSVRSGVGMEE 480
Query: 511 LLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
+ + + IT W +R+ + L++SFV+ETRV
Sbjct: 481 VGVLGAM-KHITDLWALRVACPQEFSDTLLVSFVDETRVF 519
>gi|453081643|gb|EMF09692.1| DNA damage-binding protein 1 [Mycosphaerella populorum SO2202]
Length = 1151
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 125/304 (41%), Gaps = 35/304 (11%)
Query: 393 KMVFCVDTGEFFMIEIAFGSDG-HKVHLSECLYKGPPCKALLWV-EGRFLSAFVEMGDGM 450
+ V D G+ +++ + +DG ++ + L + L+++ EGR GD
Sbjct: 300 RFVLADDYGKLYLLMVHQKADGEYQSQQIDVLGETSRASTLVYLDEGRVFVG-SHQGDSQ 358
Query: 451 VLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD-----------QMFACCGVAPEGSL 499
+++ R+ NIAPILD +V+D + D ++ G +GSL
Sbjct: 359 IIQILPQRIEVLQTFSNIAPILDFTVMDMGNRSADAPVNEFSSGQARIVTGSGAFKDGSL 418
Query: 500 RIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFT-D 558
R +RSG+ LE + + I+ +++R L+ SFV + + G + +
Sbjct: 419 RSVRSGVGLEDKGSLGDLGEPISAVFSLRSGPGVQAVDTLIASFVSHSSAIIFGSDGDIE 478
Query: 559 VTDSV-GFRPDVCTLACGLVADGLLVQIHQNAVRL--CMPTMVAHSGGIPLSYPVCT-SW 614
D GF TL G + +G VQ+ + V L M+ P + + S
Sbjct: 479 ARDEFRGFDLTQSTLYAGELPNGRAVQVTSSTVLLTDTEGDMITDRWEAPDGSSITSVSA 538
Query: 615 FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIP 674
+HV +SLG+ A L V LS S + + + + ++SC+S+
Sbjct: 539 DGDHVLVSLGSAA----------------LIVLDLSGSSITVGAHRQLGNEEQISCLSLS 582
Query: 675 QKHP 678
+ P
Sbjct: 583 RSLP 586
>gi|403224220|dbj|BAM42350.1| splicing factor 3b subunit [Theileria orientalis strain Shintoku]
Length = 1272
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNS 107
G +P + ++V + +EL + +G +Q+V VFG ++ ++ F S
Sbjct: 20 QGSFSAPKAQEIVVARSHILELYSLDSNGKLQTVASAEVFGIVRAISA------FRLTGS 73
Query: 108 QVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLI 167
Q KD LVV SDSGKL L F E+ F V G R G+ L VD G +
Sbjct: 74 Q---KDYLVVGSDSGKLVILEFSLELKTFKRVHCETYGKTGVRRIVPGQYLGVDPKGRAV 130
Query: 168 AVSAYEDRLGLFSLSMSSGSDI 189
V A E + ++ ++ S +++
Sbjct: 131 MVGAVERQKFVYIMNRDSKANL 152
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L T + +++ I+DM VVD + CG L+ +R G+S E+L +
Sbjct: 393 LYETDKLPSLSSIVDMKVVDVMGTGDYEFIMGCGRWYNSRLKSLRYGLSTEEL-----AF 447
Query: 519 QGITG----TWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTL-A 573
+ G +T++ + Y F+++SF T VL +G +VTDS F + TL +
Sbjct: 448 NELPGRPRAVFTIK-SLESNYDEFIIVSFQGNTLVLSIGEAVEEVTDSF-FLTSITTLHS 505
Query: 574 C----------------GLVADGLLVQIHQNAVR 591
C G V+DG+ VQ+H + R
Sbjct: 506 CYMSNYHATESLEGRFEGGVSDGIFVQVHDSGFR 539
>gi|367044684|ref|XP_003652722.1| hypothetical protein THITE_2114471 [Thielavia terrestris NRRL 8126]
gi|346999984|gb|AEO66386.1| hypothetical protein THITE_2114471 [Thielavia terrestris NRRL 8126]
Length = 1187
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 42/235 (17%)
Query: 458 RLVYTSPIQNIAPILDMSVVDYHDEKRDQMFA------------CCGVAPEGSLRIIRSG 505
+LV T P NI PILD ++D + + A C GV +G+LR +RSG
Sbjct: 372 QLVQTLP--NIGPILDFEIMDLGNRGDEGQLANEYSSGQARIVTCSGVHKDGTLRSVRSG 429
Query: 506 ISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGL--NFTDVTDSV 563
+ LE + A + + G + + P L +SF+ ETRV + + +V
Sbjct: 430 VGLEDVGILADL-EHCRGLFPLS-SYGSPKTDTLAVSFLTETRVFKFDSHGDVEEVESFS 487
Query: 564 GFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISL 623
G D TL + G L+Q+ A L + A SG SW PE
Sbjct: 488 GMTFDQQTLLAMNLPKGQLLQVTPAAASL----LDAESG------VTIASWAPE------ 531
Query: 624 GAVAHNMIIVSTSNPCFLFI----LGVRSLSVSH-YEIYEMQHMRLQSELSCISI 673
II +++NP +L + + SLS+++ ++ + + M Q +++CI +
Sbjct: 532 ---GERTIISASANPRWLLLSVGGTELVSLSIANDFQTVQAKDMNQQDQVACIHV 583
>gi|67516629|ref|XP_658200.1| hypothetical protein AN0596.2 [Aspergillus nidulans FGSC A4]
gi|40747539|gb|EAA66695.1| hypothetical protein AN0596.2 [Aspergillus nidulans FGSC A4]
gi|259489136|tpe|CBF89158.1| TPA: damaged DNA binding protein (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 1132
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 350 AACALLELRDYDPMCIDSDSGN-AKEPSKHVCSW-SWEPETDKIPKMVFCVDTGE-FFMI 406
AA LL L + +D+D+ +P + + +WE + + + D G FF++
Sbjct: 253 AAGGLLILGETSIKYVDADNNEIVSQPLEEATIFVAWEQVDSQ--RWLLADDYGRLFFLM 310
Query: 407 EIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQ 466
+ S+ + L L L+++ G + GD V++ + +
Sbjct: 311 LVLRNSEVERWEL-HSLGNTSRASVLVYLGGGVVFVGSHQGDSQVIRIGDQSFQVIQTLS 369
Query: 467 NIAPILDMSVVDYHDEKRD-----------QMFACCGVAPEGSLRIIRSGISLEKLLRTA 515
NIAP+LD +++D + + ++ G +G+LR +RSG+ LE+L
Sbjct: 370 NIAPVLDFTIMDLGNRTSENQMHEFSSGQARIVTGSGAFDDGTLRSVRSGVGLEELGVLG 429
Query: 516 PIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLR 551
+ + IT W +++ + L+++FV ETRV R
Sbjct: 430 DM-EHITDLWGLQVGSRGDFLDTLLVTFVNETRVFR 464
>gi|170090007|ref|XP_001876226.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649486|gb|EDR13728.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1275
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 165/436 (37%), Gaps = 85/436 (19%)
Query: 449 GMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISL 508
G +++ + S +N+APILD +VD + + C G GS+ I+R+G
Sbjct: 454 GYIVETHGSFIEVLSSYKNLAPILDAILVDTDGSGQQHIVTCSGARSTGSINIVRNGADF 513
Query: 509 EKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVT----DSVG 564
+++ P G+ G W+VR + D ++++S T + + + + T DS
Sbjct: 514 QEIGH-VPGLTGVVGVWSVRTMLEDTTDRYILVSTNRSTHLFEIDDSGSTSTITPVDSTT 572
Query: 565 FRPDVCTLACGLVAD----------------GLLVQIHQNAVRLCMPTMVAHSGGIPLSY 608
R V T A ++ L VQ+ + RL + Y
Sbjct: 573 IRSLVTTEATLAFSNLARRSSVGGSSVYKNSPLAVQVVASGARLLKSNTAFGGYELVAQY 632
Query: 609 PVCTS----WFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRL 664
+ +S P V ++ A A +++ ++ L+ LG +V E+ +
Sbjct: 633 SMLSSVPYGQRPLEV-VAASANASQLVMAASGGKLTLWRLGE---NVDALEMIAGCQRKE 688
Query: 665 QSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLSFVP 724
E+S +S + +R S + +I+ Y ++E+L V
Sbjct: 689 GPEISAVSCAPLNTTKRTSPT----------------IIVSY-----WQSNTIEILQ-VS 726
Query: 725 KEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQF-------------YVLAGLRNG 771
+GL + S +P VR VL F Y+LAGL NG
Sbjct: 727 LKGLESVYK-------------SPTLPALVRSVLLYNFGSDTNPKGTDHHPYLLAGLANG 773
Query: 772 MLLRFEWPPDSNIPSSVAPI-HSPISATFRNTENIRSGIAATS-----SFESKDEL--PI 823
+ F W + P+ H+P++ E + AA + SFE+K + PI
Sbjct: 774 TVASFRWKDKQLTDKKIIPLGHAPVNLMPCQVEGRHAVFAAGNRATVLSFENKRLVHSPI 833
Query: 824 NLQLIATRRIGITPVF 839
L+ I++ TP F
Sbjct: 834 MLKDISSAARLNTPTF 849
>gi|328858656|gb|EGG07768.1| hypothetical protein MELLADRAFT_105631 [Melampsora larici-populina
98AG31]
Length = 1216
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 43/262 (16%)
Query: 430 KALLWVEGRFLSAFVEMGDGMVLK--------EENGRLVYTSPIQNIAPILDMSVVDYHD 481
+AL+++ RF+ GD +L+ ++ + + N+API D+ VVD +
Sbjct: 378 EALVYISDRFIYLASHYGDSQLLRISALDSALAQDCQPEVVANYPNLAPISDVCVVDQSE 437
Query: 482 EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHS---F 538
Q+ C G +GSLRII GI+L L PI G W++ D HS
Sbjct: 438 GFDHQLVTCSGAYQDGSLRIITHGITLTD-LGMLPI-AGAEHIWSI-----DTPHSPQVT 490
Query: 539 LVLSFVEETRVL-----RVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
L++ F ETR L + + ++ GF+ D T+ G +++ G VQ
Sbjct: 491 LIVGFRNETRFLIIENDQFSQDVEELDSFSGFKSDRRTILAGQIISQGHHVQ-------- 542
Query: 593 CMPTMVAHSGGIPLSYPVCTSWFPEHVS-ISLGAVAHNMIIVSTSNPCFLFILGVRSLSV 651
P V I W P I++ A+ ++ +V+ L L V
Sbjct: 543 AFPIQVTQEEVI---VGEMFRWEPTSNDLITVAAIGASLTVVALQREVLL-------LHV 592
Query: 652 SHYEIYEMQHMRLQSELSCISI 673
+ + + +R +E+SC++I
Sbjct: 593 KDNLLVQSESIRFPNEVSCLAI 614
>gi|401882870|gb|EJT47110.1| hypothetical protein A1Q1_04103 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1107
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
++GR+ NIAP D ++V D + + G A S R++RSG+ E L+
Sbjct: 386 QHGRVDVRERWMNIAPAKDFAIVKEDDGRVSHVVVASGSASSNSFRVVRSGVGFENLMTI 445
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRV--GLNFTDVTDSVGFRPDVCTL 572
I GI WT+ P L++SF T +L++ ++ D V P T
Sbjct: 446 EEI-PGIERMWTIP-AADGPS---LMVSFAYSTTILQIEPEVSVFKAADQVTAVP---TF 497
Query: 573 ACGLVADGLLVQIHQNAVRL 592
A GLV LL+Q+ +RL
Sbjct: 498 AAGLVDKSLLLQVTPEGIRL 517
>gi|390603312|gb|EIN12704.1| hypothetical protein PUNSTDRAFT_97523 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1268
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 449 GMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISL 508
G V++ + L + QN+AP+ D +++ + Q+ C G A GSL+++R G
Sbjct: 463 GKVVRSDGSYLEVLATYQNLAPVTDALLMNADGSGQPQIVTCSGGANAGSLKVVRKGAD- 521
Query: 509 EKLLRTAPIYQGITGT---WTVRMKVSDPYHSFLVLSFVEETRVL 550
+TA + + + GT W VR + D S++V S + T+VL
Sbjct: 522 ---FKTAAVVESLPGTVSVWPVRKRYYDNTDSYIVASTLRCTQVL 563
>gi|406700450|gb|EKD03620.1| hypothetical protein A1Q2_02097 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1119
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
++GR+ NIAP D ++V D + + G A S R++RSG+ E L+
Sbjct: 386 QHGRVDVRERWMNIAPAKDFAIVKEDDGRVSHVVVASGSASSNSFRVVRSGVGFENLMTI 445
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRV--GLNFTDVTDSVGFRPDVCTL 572
I GI WT+ P L++SF T +L++ ++ D V P T
Sbjct: 446 EEI-PGIERMWTIP-AADGPS---LLVSFAYSTTILQLEPEVSVFKAADQVTAVP---TF 497
Query: 573 ACGLVADGLLVQIHQNAVRL 592
A GLV LL+Q+ +RL
Sbjct: 498 AAGLVDKSLLLQVTPEGIRL 517
>gi|345570887|gb|EGX53705.1| hypothetical protein AOL_s00006g33 [Arthrobotrys oligospora ATCC
24927]
Length = 1133
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 39/269 (14%)
Query: 429 CKALLWVEGRFLSAFVEMGDGMVLK--EENGRLVYTSPIQNIAPILDMSV-------VDY 479
+A+++++ ++ GD +++ + R+ + N+API D V V+
Sbjct: 322 ARAIVYLDNGYVFLGSHFGDSTLVRISSKGPRIEVVQSLPNLAPISDFIVLGTEVGGVEI 381
Query: 480 HDEKRDQ--MFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSD-PYH 536
H Q + C G +G LR +RSG+ + + + G+ W ++ + D +
Sbjct: 382 HQYSAGQTMILTCSGGFYDGGLRSVRSGVGIRDIGLLGEM-SGVQNMWALKRAILDNGFD 440
Query: 537 SFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCM 594
L+ SF E+R G + +V F D TL G V + LVQ+ V
Sbjct: 441 DTLLFSFANESRAFAFGADGEVEEVDTFENFFLDTTTLEAGNVGNDKLVQVTPFKV---- 496
Query: 595 PTMVAHSGGIPLSYPVCTSWF---PEHVSISLGAVAH-NMIIVSTSNPCFLFILGVRSLS 650
I + W P I + +++ +++V C LF L
Sbjct: 497 ---------IVVEKATSKLWNWAPPVGAKIVMASLSGARLVVVLNGRICLLFDL------ 541
Query: 651 VSHYEIYEMQHMRLQSELSCISIPQKHPE 679
S I ++ + ++E+SCI IP K +
Sbjct: 542 -SSEPIKQIANRTFENEISCIHIPTKQSD 569
>gi|281202530|gb|EFA76732.1| CPSF domain-containing protein [Polysphondylium pallidum PN500]
Length = 933
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 454 EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLR 513
E + L+ T P + P V+D +E++ Q++A GVA ++R++R G+ + ++
Sbjct: 228 ESSSNLLMTVPGGSDGP----GVMDLVNEEQPQIYALTGVADRSAMRVLRYGLPIAQIAG 283
Query: 514 TAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
T P+ +G WT+ D ++V+SF+ T VL VG +V DS L
Sbjct: 284 T-PLPGIPSGLWTIPRSQEDSIDKYIVVSFIGSTLVLSVGETVEEVVDSGILATTTSILV 342
Query: 574 CGLVADGLLVQIHQNAVR 591
+ AD ++Q+ + +R
Sbjct: 343 RPIGADS-IIQVFPHGIR 359
>gi|452824087|gb|EME31092.1| DNA damage-binding protein 1 isoform 1 [Galdieria sulphuraria]
Length = 1128
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N++PI+D V+D + + Q+ C G A +GSLRIIR+GI + + + + G+ ++
Sbjct: 355 NLSPIVDFCVMDAERQGQGQVVTCSGAAKDGSLRIIRNGIGIHE--QASVEVPGVKELFS 412
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLR-VGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ HS L+LSF E+RVL V + F TL CG V +VQI
Sbjct: 413 LKRSSLSSQHSLLLLSFASESRVLELVSTELMAEANFPVFEMQEPTLYCGNVVGDCIVQI 472
Query: 586 HQNAVRL 592
+ RL
Sbjct: 473 TPSKARL 479
>gi|294875343|ref|XP_002767276.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
gi|239868839|gb|EEQ99993.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
Length = 1258
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 31 HYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTI 90
H+ + K S V +G+ +P + ++V + +++EL+ E +Q+V FG I
Sbjct: 3 HFYNMTLSKTSAVTCAVYGNFSAPKAQEIVVARGSTLELLRPDEQNRLQTVISVNCFGLI 62
Query: 91 KDLAVVPWNKKFNAQNSQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPG 148
+ L + +++G +D L+V SDSG++ L + + F V Q G
Sbjct: 63 RSL-----------ETFRLVGANRDYLLVGSDSGRIVILEYNTTKNIFDKVHQETYGKTG 111
Query: 149 NSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLS 182
R G+ LAVD G VSA E + ++ L+
Sbjct: 112 CRRTVPGQYLAVDPKGRSCMVSAVERQKFVYILN 145
>gi|452824086|gb|EME31091.1| DNA damage-binding protein 1 isoform 2 [Galdieria sulphuraria]
Length = 1150
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N++PI+D V+D + + Q+ C G A +GSLRIIR+GI + + + + G+ ++
Sbjct: 355 NLSPIVDFCVMDAERQGQGQVVTCSGAAKDGSLRIIRNGIGIHE--QASVEVPGVKELFS 412
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLR-VGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQI 585
++ HS L+LSF E+RVL V + F TL CG V +VQI
Sbjct: 413 LKRSSLSSQHSLLLLSFASESRVLELVSTELMAEANFPVFEMQEPTLYCGNVVGDCIVQI 472
Query: 586 HQNAVRL 592
+ RL
Sbjct: 473 TPSKARL 479
>gi|118400837|ref|XP_001032740.1| CPSF A subunit region family protein [Tetrahymena thermophila]
gi|89287084|gb|EAR85077.1| CPSF A subunit region family protein [Tetrahymena thermophila
SB210]
Length = 1197
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
+ N++ I D+ V D E Q++A C +LRI+R G+ + + T+ + G
Sbjct: 398 LDNLSAISDIKVNDLTGEGNPQIYALCAAGSRSTLRILRHGLQVSEYA-TSRLPLRPNGI 456
Query: 525 WTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
WT++ + + ++VLS ++T VL + + V DS + TL G++ + ++Q
Sbjct: 457 WTIKQRHDEGLTKYIVLSSSKKTYVLSIKDTISAVNDS-SLDTNSQTLHAGILENNCIIQ 515
Query: 585 IHQNAVR 591
+ + R
Sbjct: 516 VTPESFR 522
>gi|268536658|ref|XP_002633464.1| C. briggsae CBR-DDB-1 protein [Caenorhabditis briggsae]
Length = 1134
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 39/229 (17%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N PI DM +V+ + + Q+ C G +GSLR+IR+GI +E+L + + G +
Sbjct: 351 NTGPIRDMVLVE--SDGQPQLVTCSGADKDGSLRVIRNGIGIEEL--ASVDLAKVIGMFP 406
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRV-GLNFTDVT------------DSVGFRPDVCTLA 573
+R++ + +F+++S +ET VL++ G DV S F PD L
Sbjct: 407 IRLRST--TDNFVIVSLPDETHVLKITGEELEDVQLLEIETERTTMYASSLFGPDDSELI 464
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIV 633
+ + + Q V++ PT G +S +S+ A+ H I+V
Sbjct: 465 LQVTEEEIRFMSFQKQVKIWRPT-----NGESVS------------KVSVNAI-HGQIVV 506
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRK 682
+ + + V +I + + ++E++C+ I + + +K
Sbjct: 507 AARDTVYYLKCMVDEAGALDIQI--VAERKFEAEIACLDISNEGDDYKK 553
>gi|17541566|ref|NP_502299.1| Protein DDB-1 [Caenorhabditis elegans]
gi|74965443|sp|Q21554.2|DDB1_CAEEL RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|5824558|emb|CAA92824.2| Protein DDB-1 [Caenorhabditis elegans]
Length = 1134
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 28/241 (11%)
Query: 446 MGDGMVLK---EENG--RLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLR 500
+GD +++ E NG V NI PI DM +V+ + + Q+ C G +GSLR
Sbjct: 325 LGDSQLIRLMTEPNGGSYSVILETYSNIGPIRDMVMVE--SDGQPQLVTCTGADKDGSLR 382
Query: 501 IIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRV-GLNFTDV 559
+IR+GI +++L G+ G + +R+ + +++++S +ET VL++ G DV
Sbjct: 383 VIRNGIGIDELASVD--LAGVVGIFPIRLDSN--ADNYVIVSLSDETHVLQITGEELEDV 438
Query: 560 TDSVGFRPDVCTLAC----GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWF 615
+ D+ T+ G G+++Q + +RL S G+ +
Sbjct: 439 K-LLEINTDLPTIFASTLFGPNDSGIILQATEKQIRLM------SSSGLSKFWEPTNGEI 491
Query: 616 PEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQ 675
VS++ A+ I+++ + +L V + +I + ++E++C+ +
Sbjct: 492 ISKVSVN---AANGQIVLAARDTVYLLTCIVDEMGA--LDIQLTAEKKFENEIACLDLSN 546
Query: 676 K 676
+
Sbjct: 547 E 547
>gi|303283079|ref|XP_003060831.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458302|gb|EEH55600.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1949
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 27/154 (17%)
Query: 14 RSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVI-- 71
R SPS A AS ++ + SVV V G R P DVV K ++L
Sbjct: 24 RPSPSRQLASAS-----RFVVSPLASSSVVTHVVDGRFRRPEFLDVVVAKRDQLQLYANK 78
Query: 72 -----IGED------GIVQSVCEQAVFGTIKDLAVV--------PWNKKFNAQNSQVMGK 112
G+D G + V +Q ++GT+ DL + ++ N++
Sbjct: 79 FERADRGDDDATSGIGGWRKVHQQPLYGTLLDLRTLRGSGAGGVAGVRERVGANARA-SC 137
Query: 113 DLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSN 146
DLL +SDSGKLS + + + RF P Q+HL++
Sbjct: 138 DLLCALSDSGKLSIVRYDARLARFAPARQIHLTS 171
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 76/196 (38%), Gaps = 51/196 (26%)
Query: 518 YQGITGTWTVRMK-VSDPYHS-FLVLSFVEETRV--LRVG-----------------LNF 556
+ G+ W +R DP S LVLSF + TRV +R G ++F
Sbjct: 704 FDGVVAMWGLRGGYAGDPSSSSMLVLSFSQATRVFVVRSGCGVANTTATSTNASGAMVSF 763
Query: 557 TDVTDSVGFRPDVCTLACGLVA---------------DGLLVQIHQNAVRLCMPTMVAHS 601
+ D G + CT+ACG A + ++Q + VRLC
Sbjct: 764 EEAPDGAGLDTNECTIACGAWAGPDDGGGGGGGGSAGERHVIQATPSRVRLC-------G 816
Query: 602 GGIPLSYPVCTSWFPEHVSISLGAVA---HNMIIVSTSNPCFLFILGVRSLSVSHYEIYE 658
GG+ L +W+P + + +GAVA H I +S ++ R S ++
Sbjct: 817 GGVCLH-----TWYPGNDAGPIGAVAVAPHGRIALSLPRSDNAVVVLRRGEGASATKLIR 871
Query: 659 MQHMRLQSELSCISIP 674
R E SC+ +P
Sbjct: 872 AATARFDREPSCLCLP 887
>gi|67600754|ref|XP_666354.1| CG13900 gene product [Cryptosporidium hominis TU502]
gi|54657334|gb|EAL36124.1| CG13900 gene product [Cryptosporidium hominis]
Length = 1318
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 43/210 (20%)
Query: 427 PPCKALLWVEGRFLSA-----------FVEMGDGMV------LKEENG-RLVYTSP---- 464
P C +LL + FL A V +GD L + N + VY P
Sbjct: 329 PVCNSLLLLRSGFLFASHEFGNHTNYQIVSLGDDKTDPCTSSLPDSNDLKRVYFRPRNCQ 388
Query: 465 -------IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
I +++PI D+ V+D +++ Q+ A CG P +LR+ G ++E++ P+
Sbjct: 389 CIRKSEEILSLSPITDIKVIDTNNDGTPQIVATCGRGPRSTLRVCSYGKNVEEIAEN-PL 447
Query: 518 YQGITGTWTVRMKVS-------------DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVG 564
WT++ + D H ++++SF++ + VL +G + + D++
Sbjct: 448 PGRPRCIWTLKNGIDPSLSGSQAEAAILDNIHHYIIISFIDRSLVLTIGEHVEETNDTLF 507
Query: 565 FRPDVCTLACGLVADGLLVQIHQNAVRLCM 594
+ A ++ +Q+ + V+L +
Sbjct: 508 TLNETTMYAASMIFYNSFLQVLETHVKLII 537
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 31 HYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGI-VQSVCEQAVFGT 89
H+ + + +L G + ++++V + S+EL+ + + ++S+C F
Sbjct: 3 HFYSLTLESHGSILSAIQGSYSAAKAHEIVVNRGRSLELLRLDVNAAQIRSICLMDTFSL 62
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
++ ++ N + GKDL+VV SDSG + L F + ++F + G
Sbjct: 63 VRSIS----NLRLIGS-----GKDLIVVTSDSGNIVILDFNKDKNQFERIHSEPYGKSGC 113
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLS-MSSGSDIID 191
R G LAVD G I ++A E + +++L+ + +DI+D
Sbjct: 114 RRIVPGHYLAVDPMGRSIMIAAIERQKLVYTLTRKNKDADILD 156
>gi|66361481|ref|XP_627314.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
gi|46228697|gb|EAK89567.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
Length = 1317
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 43/210 (20%)
Query: 427 PPCKALLWVEGRFLSA-----------FVEMGDGMV------LKEENG-RLVYTSP---- 464
P C +LL + FL A V +GD L + N + VY P
Sbjct: 329 PVCNSLLLLRSGFLFASHEFGNHTNYQIVSLGDDKTDPYTSSLPDSNDLKRVYFRPRNCQ 388
Query: 465 -------IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
I +++PI D+ V+D +++ Q+ A CG P +LR+ G ++E++ P+
Sbjct: 389 CIRKSEEILSLSPITDIKVIDTNNDGTPQIVATCGRGPRSTLRVCSYGKNVEEIAEN-PL 447
Query: 518 YQGITGTWTVRMKVS-------------DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVG 564
WT++ + D H ++++SF++ + VL +G + + D++
Sbjct: 448 PGRPRCIWTLKNGIDPSLSGSQAEAAILDNIHHYIIISFIDRSLVLTIGEHVEETNDTLF 507
Query: 565 FRPDVCTLACGLVADGLLVQIHQNAVRLCM 594
+ A ++ +Q+ + V+L +
Sbjct: 508 TLNETTMYAASMIFYNSFLQVLETHVKLII 537
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 31 HYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGI-VQSVCEQAVFGT 89
H+ + + +L G + ++++V + S+EL+ + + +QS+C F
Sbjct: 3 HFYSLTLESHGSILSAIQGSYSAAKAHEIVVNRGRSLELLRLDVNAAQIQSICLMDTFSL 62
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
++ ++ N + GKDL+VV SDSG + L F + ++F + G
Sbjct: 63 VRSIS----NLRLIGS-----GKDLIVVTSDSGNIVILDFNKDKNQFERIHSEPYGKSGC 113
Query: 150 SRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLS-MSSGSDIID 191
R G LAVD G I ++A E + +++L+ + +DI+D
Sbjct: 114 RRIVPGHYLAVDPMGRSIMIAAIERQKLVYTLTRKNKDADILD 156
>gi|367033707|ref|XP_003666136.1| hypothetical protein MYCTH_2310607 [Myceliophthora thermophila ATCC
42464]
gi|347013408|gb|AEO60891.1| hypothetical protein MYCTH_2310607 [Myceliophthora thermophila ATCC
42464]
Length = 1043
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 32/227 (14%)
Query: 465 IQNIAPILDMSVVDYHDEKRD------------QMFACCGVAPEGSLRIIRSGISLEKLL 512
+ NI PILD +++D + + ++ C GV +GSLR +RSG+ LE +
Sbjct: 270 LHNIGPILDFAIMDMGNRGDEGQLGNEYSSGQARIVTCSGVHKDGSLRSVRSGVGLEDVG 329
Query: 513 RTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGL--NFTDVTDSVGFRPDVC 570
A + + G ++++ P L +SF+ ETRV + + ++ G D
Sbjct: 330 ILADL-EHCRGLFSLK-SYGAPKTDILAVSFLTETRVFKFDAQGDVEELESFAGLAFDQQ 387
Query: 571 TLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNM 630
TL + G L+Q+ A T++ G+ ++ SW P + A A++
Sbjct: 388 TLLATDLQGGRLLQVTPAAA-----TVLDTESGLTVA-----SWKPGDQRSIINASANSK 437
Query: 631 IIVSTSNPCFLFILGVRSLSVS-HYEIYEMQHMRLQSELSCISIPQK 676
++ + + L SLS+S ++ + + Q +++CI +P +
Sbjct: 438 SLLLSVDGTELV-----SLSISDDLQVVRTRDISKQDQIACIHVPAQ 479
>gi|358380497|gb|EHK18175.1| hypothetical protein TRIVIDRAFT_80808 [Trichoderma virens Gv29-8]
Length = 1161
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 408 IAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVL--KEENGRLVYTSPI 465
+ G + H + + +L+++ L GD +L E ++ +
Sbjct: 323 VVTGMEVHPITFQDSSRYTSRASSLVYMGNNLLFIGSHHGDSQLLHIDIETQQMSLVKVL 382
Query: 466 QNIAPILDMSVVDYHDEKRD------------QMFACCGVAPEGSLRIIRSGISLEK--L 511
N API+D +++D + + D ++ A CG +GSLR IRSG+ LE L
Sbjct: 383 SNNAPIMDFTIMDLGNREGDAQSGNTFSSGQARIVAGCGAYQDGSLRSIRSGVGLEDRGL 442
Query: 512 LRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG-LNFTDVTDSVGFRPDVC 570
L +QG G +T+R S+ + +++S + TRVLR N ++ G +
Sbjct: 443 LDE---FQGTRGLFTLRSVESEKVDT-VIISTLTGTRVLRFEPDNIEELYSFQGIDLESE 498
Query: 571 TLACGLVADGLLVQIHQNAVRLCMP 595
TL + +G L+QI V + P
Sbjct: 499 TLLAANLPNGQLLQITPRVVNVLDP 523
>gi|46121747|ref|XP_385428.1| hypothetical protein FG05252.1 [Gibberella zeae PH-1]
Length = 1161
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 32/251 (12%)
Query: 467 NIAPILDMSVVDYHDEKRD------------QMFACCGVAPEGSLRIIRSGISLEKLLRT 514
N APILD S++D + + D ++ A CG +G+LR IRSG+ LE
Sbjct: 384 NNAPILDFSIMDMGNREGDTQSGNVFSSGQSRIVAGCGAYRDGTLRSIRSGVGLEDRGVL 443
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDVCTL 572
+ +G G +T+ S+ + LV+S + ETR+L ++ G D TL
Sbjct: 444 DEL-EGTRGLFTLHSYGSEMVDT-LVVSSITETRILSFDFEGGIEEIYSFQGMSLDSETL 501
Query: 573 ACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMI 631
+ G L+QI +V L P GG +S W P+ +I+ +
Sbjct: 502 LASNLPSGQLLQITPKSVVLLDP-----EGGTTIS-----KWDVPDGKTITRASANSKWA 551
Query: 632 IVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRK----SSSPI 687
++S + + +++L+V+ +I ++SCI + P+ SS I
Sbjct: 552 LLSVDGTSLVSLNLLQNLAVNAQQINN-DSTSQPDQISCIHAARDSPDLGVVGWWSSGQI 610
Query: 688 SLVSNSSVPAL 698
SL+ +S+ L
Sbjct: 611 SLIDMASLKPL 621
>gi|219110831|ref|XP_002177167.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411702|gb|EEC51630.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1303
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 481 DEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT------APIYQGITGTWTVRMKVSDP 534
+E Q++A G P +LR+ R G S+ +L + I+ TG K+
Sbjct: 486 NEVSPQIYALTGSGPTSALRVTRHGASVTELAVSELPGVPGAIFTIGTGNTAGGKKLD-- 543
Query: 535 YHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC-GLVADGLLVQIHQNAVR 591
F+V+SF + T VL VG +V GF + TLAC L +DG L Q+H VR
Sbjct: 544 --QFIVVSFADATLVLSVGETVEEVGKESGFLTNSPTLACSALGSDGALCQVHPVGVR 599
>gi|407923753|gb|EKG16818.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
phaseolina MS6]
Length = 1129
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Query: 447 GDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY-----------HDEKRDQMFACCGVAP 495
GD V++ G + NIAPILD +++D + + ++ G
Sbjct: 344 GDSQVIRITEGSIEVVQTFHNIAPILDFTIMDMGNRSGEGQSNEYSSGQARIVTGSGAFK 403
Query: 496 EGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN 555
+GSLR +RSG+ LE + I+ + S Y L++S V E+R+ V +
Sbjct: 404 DGSLRSVRSGVGLEDQGAIGDL-GSISNIFAFSSTASGEYDDTLLVSLVNESRIFCVDAD 462
Query: 556 FT-DVTDSV-GFRPDVCTLACGLVADGLLVQIHQNAVRL 592
D +S G + D TL V + L+Q+ Q AVR+
Sbjct: 463 GELDERESFKGLQLDESTLMTKNVPNYRLLQVTQFAVRI 501
>gi|150863836|ref|XP_001382447.2| hypothetical protein PICST_54680 [Scheffersomyces stipitis CBS
6054]
gi|149385092|gb|ABN64418.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 1228
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Query: 73 GEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMG--KDLLVVISDSGKLSFLAFC 130
E G ++ V Q G I + + +++G KDL VV+ +SGK+ FL F
Sbjct: 53 AETGKIEVVASQNTLGVIHKIEKI-----------RIVGTQKDLAVVVGESGKVVFLEFD 101
Query: 131 NEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSS 185
++HRF PV Q + G R G LAVD I + A E +F + S
Sbjct: 102 VDLHRFVPVLQEPYAKTGFGRVNPGEYLAVDPQSRCIFLGAIERNKLIFKVETDS 156
>gi|378732825|gb|EHY59284.1| DNA damage-binding protein 1 [Exophiala dermatitidis NIH/UT8656]
Length = 1185
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 26/210 (12%)
Query: 403 FFMIEIAFGSDGHKVHLSECLYKGPPCKA--LLWVEGRFLSAFVEMGDGMV--LKEENGR 458
F MIE++ G +V G KA L++++ ++ GD V ++EE R
Sbjct: 305 FLMIEVS----GGEVSSWRLDTVGVASKATCLVYLDEGYVFVGSHSGDSQVVHIEEEGVR 360
Query: 459 LVYTSPIQNIAPILDMSVVDY-------------HDEKRDQMFACCGVAPEGSLRIIRSG 505
+V + NIAPILD +++D + ++ G +G++R +RSG
Sbjct: 361 VVQS--FANIAPILDFTIMDLGRGAEAGGQQALEFSSGQARIVTASGAWQDGTIRSVRSG 418
Query: 506 ISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSV 563
+ LE+L + IT W + LV+SFV ETRV + +V +
Sbjct: 419 VGLEELGTIGELSH-ITDLWGLSSTGQSDVQDVLVVSFVTETRVFKFDSEAAVEEVDEFH 477
Query: 564 GFRPDVCTLACGLVADGLLVQIHQNAVRLC 593
TL + D L QI++ +R+
Sbjct: 478 HLEFSQPTLLAANLPDRKLAQIYETGLRIT 507
>gi|440301551|gb|ELP93937.1| CPSF A subunit region protein, putative, partial [Entamoeba
invadens IP1]
Length = 474
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 470 PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRM 529
P+ + VVD DE+ + A G +++ + +G+S+E+ ++ P+ T WT++
Sbjct: 352 PLTCLDVVD--DEEVLKFHAFVGKGSRSTVKTLINGLSVEEFMK-FPL-NNPTNVWTLKT 407
Query: 530 KVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNA 589
++ H F+V+ F ++T VL+ + G R + TL G++ DG L+QIH +
Sbjct: 408 -YNENMHKFIVIGFKDQTYVLKKVADTLTQCPECGIRLNTQTLHAGMLIDGTLLQIHSHG 466
Query: 590 V 590
+
Sbjct: 467 I 467
>gi|408393339|gb|EKJ72604.1| hypothetical protein FPSE_07241 [Fusarium pseudograminearum CS3096]
Length = 1161
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 109/251 (43%), Gaps = 32/251 (12%)
Query: 467 NIAPILDMSVVDYHDEKRD------------QMFACCGVAPEGSLRIIRSGISLEKLLRT 514
N APILD S++D + + D ++ A CG +G+LR IRSG+ LE
Sbjct: 384 NNAPILDFSIMDMGNREGDTQSGNVFSSGQSRIVAGCGAYRDGTLRSIRSGVGLEDRGVL 443
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDVCTL 572
+ +G G +T+ S + LV+S + ETR+L L ++ G D TL
Sbjct: 444 DEL-EGTRGLFTLHSYGSKMVDT-LVVSSITETRILSFDLEGGIEEIYSFQGMSLDSETL 501
Query: 573 ACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMI 631
+ G L+QI +V L P GG +S W P+ +I+ +
Sbjct: 502 LASNLPSGQLLQITPKSVVLLDP-----EGGTTIS-----KWDVPDGKTITRASANSKWA 551
Query: 632 IVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRK----SSSPI 687
++S + + +++L+V+ +I ++SCI + P+ SS I
Sbjct: 552 LLSVDGTSLVSLNLLQNLAVNAQQINN-DSTSQPDQISCIHAARDPPDLGVAGWWSSGQI 610
Query: 688 SLVSNSSVPAL 698
SL+ +S+ L
Sbjct: 611 SLIDMASLKPL 621
>gi|224004656|ref|XP_002295979.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
associated protein [Thalassiosira pseudonana CCMP1335]
gi|209586011|gb|ACI64696.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
associated protein [Thalassiosira pseudonana CCMP1335]
Length = 1212
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 460 VYTSPIQNIAPILDMSVVDY-HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
VYT + ++AP++ + V + +E Q++A CG P SLR++R G+S+ +L +
Sbjct: 381 VYT--LDSLAPVISVLVGELAGNEVSPQLYALCGRGPTSSLRVLRHGLSVTELAVSE--L 436
Query: 519 QGITGT-WTVR----MKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
G+ G + VR K Y ++V+SF + T VL VG ++ GF TLA
Sbjct: 437 PGVPGAVFNVRDDQAAKNGKFYDRYIVVSFADATLVLSVGETVEEMGKESGFLTTEPTLA 496
Query: 574 C 574
C
Sbjct: 497 C 497
>gi|409049568|gb|EKM59045.1| hypothetical protein PHACADRAFT_181065 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1268
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
NIAPI+D + D + + Q+ C G A GSL ++R+G ++L I +T W
Sbjct: 472 NIAPIVDAVMADPDESGQPQIITCSGGANTGSLNVVRTGADFQELAVLNEI-PNVTNIWP 530
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLR 551
+R P ++++ + + E+ VLR
Sbjct: 531 IRTSFDGPADTYVLATTLYESFVLR 555
>gi|385305455|gb|EIF49426.1| nuclear mrna splicing [Dekkera bruxellensis AWRI1499]
Length = 570
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 456 NGRLVYTSPIQNIAPILDMSVVDYHDEKRDQ--MFACCGVAPEGSLRIIRSGISLEKLLR 513
N LVY ++N+ P++D ++ D D + + CG SL+I+ I +++
Sbjct: 52 NLNLVYI--VENLNPVIDCTI-HSSDNVTDLPVIISLCGSQSRSSLKILNHEIPYTEIV- 107
Query: 514 TAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLA 573
+ + + + D + LSF +ET +L++G + ++ GF+ DV TLA
Sbjct: 108 SQELPSKVEAVFAFATHADDXNDKLIALSFYDETLLLKIGEEVEEA-ENTGFKTDVATLA 166
Query: 574 CGLVADGLLVQIHQNAVR 591
+ +G +VQ++ + R
Sbjct: 167 XAQLGNGSVVQVYADGXR 184
>gi|358382582|gb|EHK20253.1| hypothetical protein TRIVIDRAFT_58763 [Trichoderma virens Gv29-8]
Length = 1326
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 120/292 (41%), Gaps = 44/292 (15%)
Query: 12 KSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVI 71
K+ ++P +S P P L++ +++ VV V LRS T ND+ F E +++
Sbjct: 25 KASAAPQLASEPLPQPPVCGILSQTIVESPVVRWVLPVRLRSSTHNDIAFIGEHFVQISQ 84
Query: 72 IGEDGIVQSVCEQAVFG-TIKDLAVVPWNKK----------------------------F 102
+G DG V V ++ FG I++ V+ N + F
Sbjct: 85 LGRDGQVHDVLRKSDFGFRIRNAVVLGDNLEHGLDDDPYGVAVKPEPPSSPLSPGAHGIF 144
Query: 103 NAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDS 162
N S + LLV++ +S +L FL NP + +G LAVD
Sbjct: 145 NDTQSNSLPPQLLVLMLESCQLLFLFVRERPDHTLEFVITKYDNPRLLPY-MGYQLAVDP 203
Query: 163 SGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSAS-RIAQKNSISGTIWS 221
S +A + E G+F + ++K+ Y + ++ S RI ++SG I
Sbjct: 204 SSRYMAAATPE---GIFVVYELEALSELNKQ--YTEQGSIEPIMSIRI---RAVSGVIHK 255
Query: 222 MCFISTDPRQPSKEHNPILAIILNR---RGALLNELLLVGWNIREHAISVLS 270
+ F+ PR+ + H +L I+ R RG ++ + W + E ++ +
Sbjct: 256 LEFLF--PRREDEYHVILLLIVARRERSRGPPVSRMATYEWELGEDLQTIFA 305
>gi|303313681|ref|XP_003066852.1| CPSF A subunit region family protein [Coccidioides posadasii C735
delta SOWgp]
gi|240106514|gb|EER24707.1| CPSF A subunit region family protein [Coccidioides posadasii C735
delta SOWgp]
gi|320031496|gb|EFW13458.1| UV-damaged DNA binding protein [Coccidioides posadasii str.
Silveira]
Length = 1144
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 447 GDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDE----------KRDQMFACCGVAPE 496
GD V++ G + NI PILD +V+D + + ++ G +
Sbjct: 352 GDSHVIRITEGSFEIIQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVTGSGAFRD 411
Query: 497 GSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
GSLR +RSG+ +E L + + IT W V + + L+LSFV+E+RV
Sbjct: 412 GSLRSVRSGVGMEDLGVLGAM-EHITDLWGVSAFCPEGFCDTLLLSFVDESRVF 464
>gi|407044103|gb|EKE42371.1| DNA damage-binding protein, putative [Entamoeba nuttalli P19]
Length = 1088
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 56/218 (25%)
Query: 373 KEPSKHVCSWSWEP---ETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPC 429
KE +KH + P + IP V +D F +GS G HL + KG C
Sbjct: 282 KENNKHEIELYYYPLEYQALTIPSTVLYLDNSVLF-----WGSKGGDSHLIKINEKG--C 334
Query: 430 KALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDE--KRDQM 487
+ L E R PILDM+ + HDE +D +
Sbjct: 335 EILETFENR------------------------------GPILDMTAI--HDEITNKDNL 362
Query: 488 FACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEET 547
CC +G+L++I SG+ ++ + + +GIT + M + +L++S+ + +
Sbjct: 363 LMCCNTYQQGTLKLISSGVGIDIICQNE--MKGITHLYQAEM----GHKEYLIISYGDGS 416
Query: 548 RVLRV-----GLNFTDVTDSVGFRPDVCTLACGLVADG 580
+V L F ++ + GF T+ G++ G
Sbjct: 417 KVFESQQEVNQLRFNEI-EIKGFNRKEETICSGIIEIG 453
>gi|452845193|gb|EME47126.1| hypothetical protein DOTSEDRAFT_69180 [Dothistroma septosporum
NZE10]
Length = 1223
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
I + P+L V + +E Q++A G + + IR G+ +E L+ +
Sbjct: 430 IPGLHPLLKTKVDNLTNEDAPQIYAIQGTGNKSQFKTIRHGLDVEVLINNSMGNVPYDNI 489
Query: 525 WTVRMKVSDPYHSFLVL--SFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLL 582
WT + + SD +H +L+L S+ + T +G + + +S F + T+ + D L
Sbjct: 490 WTFKHRSSDDHHKYLLLSSSYGDLTIACSIGDSVEQI-ESSPFLENRATVHAQQMGDATL 548
Query: 583 VQIHQNAVR 591
VQ+H +R
Sbjct: 549 VQVHARGIR 557
>gi|449296290|gb|EMC92310.1| hypothetical protein BAUCODRAFT_151722 [Baudoinia compniacensis
UAMH 10762]
Length = 1224
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
L Y P N P++ V + E Q++A G L+ +R G+ + +++ +
Sbjct: 426 LAYDVPGLN--PLMRTKVDNLTGEDAPQIYAIQGTGNSSVLKTMRHGLEINEIVSSPLGN 483
Query: 519 QGITGTWTVRMKVSDPYHSFLVLS--FVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGL 576
W+++ + D YHS+L+LS + ++T VL +G + + ++ F + T+
Sbjct: 484 LQYDNLWSLKHRAVDDYHSYLLLSSGYGDKTIVLSIG-DEVETMENSPFLTNRATITANQ 542
Query: 577 VADGLLVQIHQNAV 590
+ D LVQ+H +
Sbjct: 543 MGDATLVQVHARGI 556
>gi|407039323|gb|EKE39583.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
Length = 1108
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 470 PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRM 529
P+ + VVD H+ Q+ A G SL+I+ G++ ++ + + Q WT++
Sbjct: 350 PLTSIDVVDSHEVL--QIRAFVGKGSRSSLKILTHGLNPDECMSLS--LQHPRNIWTLK- 404
Query: 530 KVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNA 589
++ H ++V+ +T VL+ + G RP+V TL G+ DG LVQIH +
Sbjct: 405 PYNEQTHQYVVIGLENQTYVLKTLPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHG 464
Query: 590 V 590
+
Sbjct: 465 I 465
>gi|413948669|gb|AFW81318.1| hypothetical protein ZEAMMB73_456332 [Zea mays]
Length = 674
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 137/370 (37%), Gaps = 94/370 (25%)
Query: 538 FLVLSFVEETRVLRVGLNFTDVTDSV-GFRPDVCTLACGLVADGLLVQIHQNAVRLCMPT 596
+LV+SF+ ETR L + + + GF TL C + LL+Q+ N+VRL T
Sbjct: 2 YLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCT 61
Query: 597 MVAHSGGIPLSYPVCTSW-FPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYE 655
S + W P S+++ + + ++++T ++ L + +
Sbjct: 62 ----------SRELVDQWNAPAGFSVNVASANASQVLLATGGGHLVY------LEIRDAK 105
Query: 656 IYEMQHMRLQSELSCISIPQKHPERRKSSSPI-SLVSNSSVPALPAGVIIGYTFVIGTHR 714
+ E++H +L+ E+SC+ + +PI + SS+ A +G I
Sbjct: 106 LVEVKHAQLEHEISCLDL-----------NPIGEHLEYSSLAA------VGMWTDISVRI 148
Query: 715 PSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRL-VLADQFYVLAGLRNGML 773
S+ L + KE L G IV P+ V L L Y+L L +G L
Sbjct: 149 FSLPDLVLIRKENL----GGEIV-------------PRSVLLCTLEGVSYLLCALGDGNL 191
Query: 774 LRFEWPPDSNIPSSVAPIHSPISATFRNTENIRSGIAATSSFESKDELPINLQLIATRRI 833
F + S+ E D + L
Sbjct: 192 FSF--------------------------------LLNASTGELTDRKKVTL-------- 211
Query: 834 GITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVECPKGI 893
G P+ L S + A SDRP ++ ++ L Y++++ + H P + P +
Sbjct: 212 GTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAFPDSL 271
Query: 894 LFVAENSLNL 903
E L++
Sbjct: 272 AIAKEGELSI 281
>gi|449706784|gb|EMD46555.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica KU27]
Length = 1079
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 470 PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRM 529
P+ + VVD H+ Q+ A G SL+I+ G++ ++ + + Q WT++
Sbjct: 321 PLTSIDVVDSHEVL--QIRAFVGKGSRSSLKILTHGLNPDECMSLS--LQHPRNIWTLK- 375
Query: 530 KVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNA 589
++ H ++V+ +T VL+ + G RP+V TL G+ DG LVQIH +
Sbjct: 376 PYNEQTHQYVVIGLENQTYVLKTLPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHG 435
Query: 590 V 590
+
Sbjct: 436 I 436
>gi|67473926|ref|XP_652712.1| splicing factor 3b subunit 3 [Entamoeba histolytica HM-1:IMSS]
gi|56469590|gb|EAL47325.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 1108
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 470 PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRM 529
P+ + VVD H+ Q+ A G SL+I+ G++ ++ + + Q WT++
Sbjct: 350 PLTSIDVVDSHEVL--QIRAFVGKGSRSSLKILTHGLNPDECMSLS--LQHPRNIWTLK- 404
Query: 530 KVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNA 589
++ H ++V+ +T VL+ + G RP+V TL G+ DG LVQIH +
Sbjct: 405 PYNEQTHQYVVIGLENQTYVLKTLPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHG 464
Query: 590 V 590
+
Sbjct: 465 I 465
>gi|241560031|ref|XP_002400960.1| spliceosomal protein sap, putative [Ixodes scapularis]
gi|215501812|gb|EEC11306.1| spliceosomal protein sap, putative [Ixodes scapularis]
Length = 1019
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 522 TGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGL 581
WTV+ K + + +++++SFV T VL +G +VTDS GF TL+C + D
Sbjct: 444 NAVWTVKRKADEDFDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLSCAQIGDDA 502
Query: 582 LVQ 584
LVQ
Sbjct: 503 LVQ 505
>gi|320593036|gb|EFX05445.1| uv-damaged DNA-binding protein [Grosmannia clavigera kw1407]
Length = 1504
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 15/100 (15%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFA------------CCGVAPEGSLRIIRSGISLEKLL 512
+QNIAP+LD +V+D + + DQ A GV +GSLR +RSG+ LE +
Sbjct: 693 LQNIAPVLDFTVMDMGNREDDQQLANEYASGQARIVTGSGVHKDGSLRSVRSGVGLEDIG 752
Query: 513 RTAPIYQGITGTWTVRMKVSDPYHSF--LVLSFVEETRVL 550
+ G+ G +++R + LV SF+ ETRV
Sbjct: 753 ILGDL-GGVRGLFSLRSPQTQQQQQVDTLVASFLTETRVF 791
>gi|412986884|emb|CCO15310.1| predicted protein [Bathycoccus prasinos]
Length = 1595
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 24/198 (12%)
Query: 468 IAPILDMSV-----VDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT-APIYQGI 521
I+P++D++V V + R ++ A CG G+L I+ GI+ E + + G+
Sbjct: 679 ISPVVDLTVGASAPVGTDLDPRTELVAACGHGKNGALAILTRGITPELVTEVESGALPGL 738
Query: 522 TGTW----------TVRMKVSDPY---HSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPD 568
W TVR K D H L LS + T VL G +V+ V F D
Sbjct: 739 RACWATRTEDDNDGTVRPKRKDELFDEHLILSLSSTKTTMVLETGEELREVSKEVDFIVD 798
Query: 569 VCTLACGLVADG-LLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVA 627
TLAC + +G + Q+ + +R I L++ E I+L +
Sbjct: 799 EETLACERIFNGRAIAQVTKTKIRFTRKGKKFAVDDIDLAFLKG----GEGAQITLAIIQ 854
Query: 628 HNMIIVSTSNPCFLFILG 645
++ I + S+ ILG
Sbjct: 855 NDAIALRLSDGSIRIILG 872
>gi|167386195|ref|XP_001737658.1| spliceosomal protein sap [Entamoeba dispar SAW760]
gi|165899468|gb|EDR26056.1| spliceosomal protein sap, putative [Entamoeba dispar SAW760]
Length = 1079
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 470 PILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRM 529
P+ + VVD H+ Q+ A G SL+I+ G++ ++ + + Q WT++
Sbjct: 321 PLTSVDVVDSHE--VFQIRAFVGKGSRSSLKILTHGLNPDECMSLS--LQHPRNIWTLK- 375
Query: 530 KVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNA 589
++ H ++V+ +T VL+ + G RP+V TL G+ DG LVQIH +
Sbjct: 376 PYNEQTHQYVVIGLENQTYVLKTLPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHG 435
Query: 590 V 590
+
Sbjct: 436 I 436
>gi|307107933|gb|EFN56174.1| hypothetical protein CHLNCDRAFT_144888 [Chlorella variabilis]
Length = 1804
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 366 DSDSGNAKEPSKHVCSWSWEPETDK-IPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLY 424
++ SG A + W W+P P +V ++ G + + + H + L
Sbjct: 353 EATSGGASGQFINCWCWEWQPRGQPPAPVLVCALEDGSMWRVPLIAQRSEHAPGVGAMLT 412
Query: 425 KG----------PPCKALLWVEGRFLSAFVEMGDGMVLKEENGRLVYT------------ 462
G P +++ + GR L + G+ L E G L +T
Sbjct: 413 PGRNYLQRLMSAQPARSIAALPGRLL-VYCTDASGLQLLRERG-LSHTPLLPAHMRATHQ 470
Query: 463 -----------SPIQNIAPILDMSVVDYHDEKRDQMFAC-----CGVAPEGSLRIIRSGI 506
S + A + D + D + Q++A G + G L ++
Sbjct: 471 PWLDWDWVSDWSSLPAAAAVADCQLADLEGGSQRQLYAVRRATGGGASAGGGLCVLYPDP 530
Query: 507 SLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRV-GLNFTDVTDSVGF 565
E + +GITG W +R + +D +HS +LS+V +R+L G F DVTD
Sbjct: 531 KPETVFELPGAAEGITGLWGLRRRAADRHHSLALLSYVGGSRLLAAQGGIFRDVTDCCSL 590
Query: 566 RPDVCTL 572
+ D TL
Sbjct: 591 QADAQTL 597
>gi|348679545|gb|EGZ19361.1| putative cleavage and polyadenylation specificity factor CPSF
[Phytophthora sojae]
Length = 1752
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 435 VEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPIL------DMSVVDYHD--EKRDQ 486
V G SA + +G ++EE+G Y ++ P + ++ + + D EKR++
Sbjct: 581 VNGTNGSAVKKEENGHAVEEESGPYDYVLHQIDVLPSIGQITSIELGIENNADSNEKREE 640
Query: 487 MFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVR------MKVSD--PYHSF 538
+ G G++ ++ +G L ++ T G WTV K SD Y+++
Sbjct: 641 LVISGGYERSGAISVLHNG--LRPIVGTEAELNGCRAMWTVSSSLPSATKSSDGRSYNAY 698
Query: 539 LVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQIHQNAVRLCM 594
L+LS T VLR G + D GF TLA L +VQI + R+ M
Sbjct: 699 LILSVAHRTMVLRTGEGMEPLEDDSGFYTSGPTLAAANLFNKQRIVQIFKQGARVMM 755
>gi|119191318|ref|XP_001246265.1| hypothetical protein CIMG_00036 [Coccidioides immitis RS]
Length = 1072
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 447 GDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDE----------KRDQMFACCGVAPE 496
GD V++ G + NI PILD +V+D + + ++ G +
Sbjct: 352 GDSHVIRITEGSFEIIQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVTGSGAFRD 411
Query: 497 GSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
GSLR +RSG+ +E L + + IT W + + + L+LSFV+E+RV
Sbjct: 412 GSLRSVRSGVGMEDLGVLGAM-EHITDLWGLSAFCPEGFCDTLLLSFVDESRVF 464
>gi|449704103|gb|EMD44407.1| DNA-repair binding protein, putative [Entamoeba histolytica KU27]
Length = 1088
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 431 ALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDE--KRDQMF 488
+L+++ L + GD ++K +N PILDM+ + HDE +D +
Sbjct: 306 TVLYLDNSVLFWGSKGGDSHLIKINEKGCEILETFENRGPILDMTAI--HDEITNKDNLL 363
Query: 489 ACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETR 548
CC +G+L++I SG+ ++ + + +GIT + M + +L++S+ + ++
Sbjct: 364 MCCNTYQQGTLKLISSGVGIDIICQNE--MKGITHLYQAEM----GHKEYLIISYGDGSK 417
Query: 549 VLRV-----GLNFTDVTDSVGFRPDVCTLACGLVADG 580
V L F ++ + GF T+ G++ G
Sbjct: 418 VFESQQEVNQLRFNEI-EIKGFNRKEETICSGIIEIG 453
>gi|183232997|ref|XP_653855.2| damaged DNA binding protein [Entamoeba histolytica HM-1:IMSS]
gi|169801778|gb|EAL48469.2| damaged DNA binding protein, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 1088
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 431 ALLWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDE--KRDQMF 488
+L+++ L + GD ++K +N PILDM+ + HDE +D +
Sbjct: 306 TVLYLDNSVLFWGSKGGDSHLIKINEKGCEILETFENRGPILDMTAI--HDEITNKDNLL 363
Query: 489 ACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETR 548
CC +G+L++I SG+ ++ + + +GIT + M + +L++S+ + ++
Sbjct: 364 MCCNTYQQGTLKLISSGVGIDIICQNE--MKGITHLYQAEM----GHKEYLIISYGDGSK 417
Query: 549 VLRV-----GLNFTDVTDSVGFRPDVCTLACGLVADG 580
V L F ++ + GF T+ G++ G
Sbjct: 418 VFESQQEVNQLRFNEI-EIKGFNRKEETICSGIIEIG 453
>gi|392864500|gb|EAS34654.2| UV-damaged DNA binding protein [Coccidioides immitis RS]
Length = 1144
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 447 GDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDE----------KRDQMFACCGVAPE 496
GD V++ G + NI PILD +V+D + + ++ G +
Sbjct: 352 GDSHVIRITEGSFEIIQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVTGSGAFRD 411
Query: 497 GSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
GSLR +RSG+ +E L + + IT W + + + L+LSFV+E+RV
Sbjct: 412 GSLRSVRSGVGMEDLGVLGAM-EHITDLWGLSAFCPEGFCDTLLLSFVDESRVF 464
>gi|294654658|ref|XP_456718.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
gi|218511767|sp|Q6BYK1.2|RSE1_DEBHA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|199429049|emb|CAG84677.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
Length = 1256
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 32 YLAKCVLK--GSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFG 88
YL +K S + + L + S +++ TSIEL + G ++ + +QA FG
Sbjct: 9 YLYNLTIKHPSSCIASIVGQFLGNKKSQEIILANSTSIELWKADSNTGKLEKIYQQASFG 68
Query: 89 TIKDLAVVPWNKKFNAQNSQVMG--KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSN 146
I+ + + +++G KD +V+ SDSGKL L F E +F P+ Q S
Sbjct: 69 IIQGIDKI-----------RLVGTQKDYVVITSDSGKLVVLEFDIEKLQFVPLFQEPHSK 117
Query: 147 PGNSRHQLGRMLAVDSSGCLIAVSAYE 173
G R G L VD I + A E
Sbjct: 118 NGLRRTSPGEYLCVDPHNRAILIGAIE 144
>gi|255725990|ref|XP_002547921.1| hypothetical protein CTRG_02218 [Candida tropicalis MYA-3404]
gi|240133845|gb|EER33400.1| hypothetical protein CTRG_02218 [Candida tropicalis MYA-3404]
Length = 1053
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Query: 52 RSPTSNDVVFGKETSIELV-IIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVM 110
R ++ T+++L I+ + G +Q Q + GTI + + +K
Sbjct: 41 RKKKPQQLILVSSTTLQLYEILPDSGKLQIKTSQNLLGTINKVEKISIEEKH-------- 92
Query: 111 GKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVS 170
D LV+ SDSG +S L + + RF Q ++ G +R +G LA+D I VS
Sbjct: 93 --DSLVITSDSGNISILEYSTKEERFISKGQESMTKNGWNRSYVGEYLAIDPENRCILVS 150
Query: 171 AYE 173
A E
Sbjct: 151 AME 153
>gi|258572939|ref|XP_002540651.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237900917|gb|EEP75318.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1144
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 383 SWEPETDKIPKMVFCVDTGE-FFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLS 441
+WE ++ + + D G FF++ + ++ + + L + L+ + G +
Sbjct: 288 AWEQLDNQ--RWLLADDYGRLFFLMLVLDSANAVRTWKVDLLGETSRASVLVHLGGGVVF 345
Query: 442 AFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDY--------HDEKRDQ--MFACC 491
GD V++ G + NIAPILD +V+D H+ Q +
Sbjct: 346 LGSHQGDSHVIRITEGSFEIIQTLSNIAPILDFTVMDLGHRGDTLTHEFSSGQARIVTGS 405
Query: 492 GVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
G +GSLR +RSG+ +E L + + IT W + ++ L+L+FV E+RV
Sbjct: 406 GAFHDGSLRSVRSGVGMEDLGVLGAM-EHITDLWGLSAFCAEENCDTLLLAFVNESRVF 463
>gi|170589359|ref|XP_001899441.1| Xeroderma Pigmentosum Group E Complementing protein [Brugia malayi]
gi|158593654|gb|EDP32249.1| Xeroderma Pigmentosum Group E Complementing protein, putative
[Brugia malayi]
Length = 521
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+API DM+V+ + ++ Q+ C G +G++RIIR+GI +E+L +GI +T
Sbjct: 359 NLAPIRDMTVMRCNGQQ--QILTCSGAYKDGTIRIIRNGIGIEELASVE--LKGIKNMFT 414
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG 575
+R + D + +L+LSF ET VL + + T+ GF D TL G
Sbjct: 415 LRTR-DDEFDDYLILSFDSETHVLLINGEELEDTEITGFTVDGATLWAG 462
>gi|300175350|emb|CBK20661.2| unnamed protein product [Blastocystis hominis]
Length = 240
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
Query: 35 KCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLA 94
K + G+ V V GH + TSI L + DG +V Q +FGT +
Sbjct: 6 KILSYGTNVNGVVTGHFLGNNDLQFIILSGTSISLYSV-IDGKEYNVVTQTLFGTGLVIQ 64
Query: 95 VVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQL 154
+ + F KDL+V+ SDSG +S L + E F +A PG
Sbjct: 65 RLKLSDYF---------KDLIVLTSDSGCMSILWYSLESSSFQTIANFQFGKPGCLLEVP 115
Query: 155 GRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSD 188
G+ LAV++ LIA+ A + ++SL S D
Sbjct: 116 GQYLAVNADNNLIAIGALGGEILVYSLEHSINYD 149
>gi|10257491|dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit
[Arabidopsis thaliana]
Length = 1448
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 21/153 (13%)
Query: 459 LVYTSPIQNIAPIL----DMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
LV P+++ A L D + + ++ C G G+L ++R I E + T
Sbjct: 517 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMI--T 574
Query: 515 APIYQGITGTWTVRMKVS--------------DPYHSFLVLSFVEETRVLRVGLNFTDVT 560
G G WTV K S D YH++L++S T VL T+VT
Sbjct: 575 EVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLETADLLTEVT 634
Query: 561 DSVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
+SV + T+A G L ++Q+ ++ R+
Sbjct: 635 ESVDYYVQGRTIAAGNLFGRRRVIQVFEHGARI 667
>gi|30696088|ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
[Arabidopsis thaliana]
gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName: Full=Cleavage and polyadenylation specificity factor
subunit 1; AltName: Full=Cleavage and polyadenylation
specificity factor 160 kDa subunit; Short=AtCPSF160;
Short=CPSF 160 kDa subunit
gi|332008729|gb|AED96112.1| cleavage and polyadenylation specificity factor subunit 1
[Arabidopsis thaliana]
Length = 1442
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 21/153 (13%)
Query: 459 LVYTSPIQNIAPIL----DMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
LV P+++ A L D + + ++ C G G+L ++R I E + T
Sbjct: 511 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMI--T 568
Query: 515 APIYQGITGTWTVRMKVS--------------DPYHSFLVLSFVEETRVLRVGLNFTDVT 560
G G WTV K S D YH++L++S T VL T+VT
Sbjct: 569 EVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLETADLLTEVT 628
Query: 561 DSVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
+SV + T+A G L ++Q+ ++ R+
Sbjct: 629 ESVDYYVQGRTIAAGNLFGRRRVIQVFEHGARI 661
>gi|358400469|gb|EHK49795.1| hypothetical protein TRIATDRAFT_146031 [Trichoderma atroviride IMI
206040]
Length = 1161
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRD------------QMFACCGVAPEGSLRII 502
E+ ++ I N API+D +++D + + D ++ A G +GSLR I
Sbjct: 372 ESQQMTLIKVISNNAPIMDFTIMDLGNREGDAQSGNTFSSGQARIVAGSGAYQDGSLRSI 431
Query: 503 RSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG-LNFTDVTD 561
RSG+ LE I +G G +T+R V +V+S + TRVLR N ++
Sbjct: 432 RSGVGLEDRGLLDEI-EGTRGLFTLR-SVDSAKADTVVISTLAGTRVLRFEPDNIEELFS 489
Query: 562 SVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMP 595
G + TL + G ++QI AV L P
Sbjct: 490 FQGMDLESPTLLAANLPSGQILQITPQAVNLLDP 523
>gi|24415580|gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
subunit [Arabidopsis thaliana]
Length = 1442
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 21/153 (13%)
Query: 459 LVYTSPIQNIAPIL----DMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
LV P+++ A L D + + ++ C G G+L ++R I E + T
Sbjct: 511 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMI--T 568
Query: 515 APIYQGITGTWTVRMKVS--------------DPYHSFLVLSFVEETRVLRVGLNFTDVT 560
G G WTV K S D YH++L++S T VL T+VT
Sbjct: 569 EVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLETADLLTEVT 628
Query: 561 DSVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
+SV + T+A G L ++Q+ ++ R+
Sbjct: 629 ESVDYYVQGRTIAAGNLFGRRRVIQVFEHGARI 661
>gi|301093545|ref|XP_002997618.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110008|gb|EEY68060.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1744
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 11/123 (8%)
Query: 481 DEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTV--------RMKVS 532
+EKR+++ G G++ ++ +G L ++ T G WTV R
Sbjct: 632 NEKREELVISGGYERSGAISVLHNG--LRPIVGTEAELNGCRAMWTVSSSLPSATRSSDG 689
Query: 533 DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQIHQNAVR 591
Y+++L+LS T VLR G + D GF TLA L +VQI + R
Sbjct: 690 RSYNAYLILSVAHRTMVLRTGEGMEPLEDDSGFYTSGSTLAAANLFNKQRIVQIFKQGAR 749
Query: 592 LCM 594
+ M
Sbjct: 750 VMM 752
>gi|402595041|gb|EJW88967.1| hypothetical protein WUBG_00126 [Wuchereria bancrofti]
Length = 621
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+API DM+V+ + ++ Q+ C G +G++RIIR+GI +E+L +GI +T
Sbjct: 359 NLAPIRDMTVMRCNGQQ--QILTCSGAYKDGTIRIIRNGIGIEELASVE--LKGIKNMFT 414
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG 575
+R + D + +L+LSF ET VL + + T+ GF D TL G
Sbjct: 415 LRTR-GDEFDDYLILSFDSETHVLFINGEELEDTEITGFAVDGATLWAG 462
>gi|66826737|ref|XP_646723.1| hypothetical protein DDB_G0270344 [Dictyostelium discoideum AX4]
gi|60474585|gb|EAL72522.1| hypothetical protein DDB_G0270344 [Dictyostelium discoideum AX4]
Length = 1547
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%)
Query: 112 KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSA 171
KD L++ SDSG LS L++ N +F V +S PG S LG + + +I V A
Sbjct: 202 KDFLILTSDSGYLSVLSWSNLKKQFLFVQHFKISPPGYSFKYLGEKIQISPCNRVIGVCA 261
Query: 172 YEDRLGLFSLSMSSGSDIIDKKICYPSESEVD 203
+ +L +F ++ + DI D + E+D
Sbjct: 262 LKKKLSIFLVNSNDDGDINDPFSIISKQIEID 293
>gi|260947152|ref|XP_002617873.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
gi|238847745|gb|EEQ37209.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
Length = 1242
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 133/313 (42%), Gaps = 42/313 (13%)
Query: 468 IAPILDMSVVD-YHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
++P++D ++++ Y E D + +A ++ + G+ + +L+ ++P+ T +T
Sbjct: 432 LSPLVDSTMLETYSSEFPDPLKQLVTLASNSYMKTLTYGVPVSELV-SSPVPINPTSIFT 490
Query: 527 VRMKVSDPYHSFLVL--SFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQ 584
++ +LVL S ++ VL +G +V+DS GF D T+A + LVQ
Sbjct: 491 TKISKKSINDDYLVLTSSLTMKSMVLSIGEVVEEVSDS-GFALDQHTIAVQQIGQHSLVQ 549
Query: 585 IHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFIL 644
+H N +R + S + T+W+P + L A +N + ++
Sbjct: 550 VHNNGIR-HIRNFFDDSDNVTSKRE--TNWYPPAGIVILHASTNNEQV----------LV 596
Query: 645 GVRSLSVSHYEI--YEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGV 702
G+ + V ++EI + Q + Q L S + ++L S + G
Sbjct: 597 GLSNREVCYFEIDPADDQLIEYQERLEVTG---------GSITALALASK----FVTEGD 643
Query: 703 IIGYTFVIGTHRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQF 762
VIGT +++V+S +PK ++ T+ + C + + D +
Sbjct: 644 RKSNFAVIGTSEETIQVISLLPKTCFEIV---------TLQALSANCFSLLMMPLDKDNY 694
Query: 763 YVLAGLRNGMLLR 775
+V G+ NG+ R
Sbjct: 695 FVHIGMINGVYAR 707
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 56 SNDVVFGKETSIELVI-IGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDL 114
+ ++V T+IE+ E G ++ + Q F ++++ K +Q KDL
Sbjct: 62 TQELVLATSTTIEIYRPDTEKGKLRKLMVQHAFAIVQNI------DKIRLTGTQ---KDL 112
Query: 115 LVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYED 174
L++ SDSGK+ F + +F P+ Q S G R G L V+ + ++A E
Sbjct: 113 LIITSDSGKVVVAEFNEALSKFVPIVQEPHSKNGLRRVTPGEYLCVEPDNRAVMIAAVER 172
Query: 175 RLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQP 232
++ + M + S I+ K+ P E+ KN+++ ++C + T+ P
Sbjct: 173 NKLVYKVEMQNESGIL--KLSSPLEN---------TSKNTLT---LNLCALDTNYENP 216
>gi|336369683|gb|EGN98024.1| hypothetical protein SERLA73DRAFT_109335 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382464|gb|EGO23614.1| hypothetical protein SERLADRAFT_449959 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1257
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 456 NGRLVYTSPIQ---NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLL 512
NGR + S I+ NIAPI+D ++VD + + + C G GS+ I+R+G + +
Sbjct: 436 NGRGSFLSVIESYKNIAPIIDAALVDVDNSGQHAVVTCSGGQNTGSISIVRNGADFKAMA 495
Query: 513 RTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
I +T W +R D + + +S + T +L
Sbjct: 496 NMEGIVD-VTNIWPLRANYYDTVDTHVAVSTFKATHIL 532
>gi|290988576|ref|XP_002676977.1| predicted protein [Naegleria gruberi]
gi|284090582|gb|EFC44233.1| predicted protein [Naegleria gruberi]
Length = 744
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 28/226 (12%)
Query: 391 IPKMVFCVDTGEFFMIEIAFGSDGHKVH-LSECLYKGPPCKALLWVEGRFLSAFVEMGDG 449
+ K C + G+ + I DG++ + L L CK+ E FL + + D
Sbjct: 64 LQKGYLCTEHGDIYSI------DGNQANMLYSKLGVDKICKS--SQEANFLIGYSSVSDL 115
Query: 450 MV--LKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGIS 507
+ L+E L S + NI+ ++D D+K D +A L ++ G+S
Sbjct: 116 IYIPLEESMTDLQPRSLLPNISYVIDF------DKKGDDFI----IATPKRLCSVKKGMS 165
Query: 508 LEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRP 567
T Y GI +T P F++LSFV +++VLR+ + D ++ F
Sbjct: 166 CRVTSLTDESYDGIDNVFT-------PTTDFIILSFVNQSKVLRISEDSIDECNNNVFES 218
Query: 568 DVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
T C + + ++Q+ +RL + I ++ V TS
Sbjct: 219 SQATFYCNQILNSFILQVTATEMRLMDLQLSTLLSSIKINSTVITS 264
>gi|315039795|ref|XP_003169275.1| hypothetical protein MGYG_08821 [Arthroderma gypseum CBS 118893]
gi|311337696|gb|EFQ96898.1| hypothetical protein MGYG_08821 [Arthroderma gypseum CBS 118893]
Length = 1076
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 447 GDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRD------QMFACCGVAPEGSLR 500
G +L ++ GRL + + + ++ VD R+ ++ G +GSLR
Sbjct: 291 GQRWLLADDYGRLFFLMLVLDADNAVESWKVDLLGTTREFSSGQTRIVTGSGAFGDGSLR 350
Query: 501 IIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
+RSG+ +E L A + + IT W +R +P++ L++SFV ETRV
Sbjct: 351 SVRSGVGIEDLGVLASM-EHITDLWGLRSACPEPFYDTLLVSFVNETRVF 399
>gi|297792471|ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
lyrata]
gi|297309955|gb|EFH40379.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
lyrata]
Length = 1444
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 21/153 (13%)
Query: 459 LVYTSPIQNIAPIL----DMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
LV P+++ A L D + + ++ C G G+L ++R + E + T
Sbjct: 511 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSVRPEMI--T 568
Query: 515 APIYQGITGTWTVRMKVS--------------DPYHSFLVLSFVEETRVLRVGLNFTDVT 560
G G WTV K S D YH++L++S T VL T+VT
Sbjct: 569 EVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISVEARTMVLETADLLTEVT 628
Query: 561 DSVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
+SV + T+A G L ++Q+ ++ R+
Sbjct: 629 ESVDYYVQGRTIAAGNLFGRRRVIQVFEHGARI 661
>gi|224120960|ref|XP_002318462.1| predicted protein [Populus trichocarpa]
gi|222859135|gb|EEE96682.1| predicted protein [Populus trichocarpa]
Length = 1455
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 459 LVYTSPIQNIAPIL----DMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
L+ P+++ A L D + + ++ C G G+L +++ I E + T
Sbjct: 514 LINVGPLKDFAYGLRINADANATGISKQSNYELVCCSGHGKNGALCVLQQSIRPEMI--T 571
Query: 515 APIYQGITGTWTV-------------RMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTD 561
G G WTV +M D YH++L++S T VL + T+VT+
Sbjct: 572 EVELPGCKGIWTVYHKNARIHSVDSLKMASDDEYHAYLIISMEARTMVLETADHLTEVTE 631
Query: 562 SVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
SV + T+A G L +VQ+ + R+
Sbjct: 632 SVDYFVQGRTIAAGNLFGRRRVVQVFERGARI 663
>gi|388853409|emb|CCF53029.1| related to UV-damaged DNA-binding protein [Ustilago hordei]
Length = 1508
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 35/235 (14%)
Query: 456 NGRLVYTSPIQNIAPILDMSVVD-------YHDEKRDQMFACCGVAPEGSLRIIRSGISL 508
G LV QN+ P++D +V D + ++ C G P GS+R +RSG S+
Sbjct: 636 GGSLVTIETWQNLGPVVDFTVDDGAGGDPTTSASAQARIVTCSGAGPSGSIREVRSGASV 695
Query: 509 EKLLRTAPIYQGITGTWTVRM-KVSDPYHSFLVLSFVEETRVLR--VGLNFTDVTD---S 562
+ + + PI W+V + + L++ F T L N D TD +
Sbjct: 696 QD-VSSLPIPNA-QQIWSVEAGDATSKQTAGLLIGFATSTAYLHFDANGNLADATDRLSA 753
Query: 563 VGFRPDVCTLACGLVADG----LLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEH 618
VG + TL V D LLV++ ++A L A + + W P
Sbjct: 754 VGVDTTLPTLTASTVFDASQGPLLVRVAKDAASLVNLQDEAAT--------LVQQWKPSA 805
Query: 619 -VSISLGAV-AHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCI 671
+ I+ +V + +++++S+ +++ V + E ++L E+SC+
Sbjct: 806 GLEITTASVNPYGQLVIASSDKSLSYLV------VEEGALIERNKIQLDHEVSCL 854
>gi|301103686|ref|XP_002900929.1| cleavage and polyadenylation specificity factor subunit, putative
[Phytophthora infestans T30-4]
gi|262101684|gb|EEY59736.1| cleavage and polyadenylation specificity factor subunit, putative
[Phytophthora infestans T30-4]
Length = 1561
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 11/123 (8%)
Query: 481 DEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTV--------RMKVS 532
+EKR+++ G G++ ++ +G L ++ T G WTV R
Sbjct: 462 NEKREELVISGGYERSGAISVLHNG--LRPIVGTEAELNGCRAMWTVSSSLPSATRSSDG 519
Query: 533 DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQIHQNAVR 591
Y+++L+LS T VLR G + D GF TLA L +VQI + R
Sbjct: 520 RSYNAYLILSVAHRTMVLRTGEGMEPLEDDSGFYTSGPTLAAANLFNKQRIVQIFKQGAR 579
Query: 592 LCM 594
+ M
Sbjct: 580 VMM 582
>gi|398391548|ref|XP_003849234.1| hypothetical protein MYCGRDRAFT_110919 [Zymoseptoria tritici
IPO323]
gi|339469110|gb|EGP84210.1| hypothetical protein MYCGRDRAFT_110919 [Zymoseptoria tritici
IPO323]
Length = 1315
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 28 RNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVF 87
+ I K V++ S V +R+ NDVVF E + + +GE G + V + F
Sbjct: 10 KRIGVYTKTVVRSSACRWVLRVRIRNSRCNDVVFVGEDFVRVKQVGERGHLHDVATKTDF 69
Query: 88 GT-IKDLAVVPWNK-------KFNAQNSQVMGKDL----LVVISDSGKLSFLAFCNEMHR 135
I+ AV + K A +SQ ++ LV+ DS L F+ +
Sbjct: 70 DAHIRAAAVFDHKEDDFLAKVKVEAGSSQPSADEVAPQSLVLTLDSHDLVFVYLETDHDG 129
Query: 136 FFPVAQVHLSNPGNSR--HQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKK 193
F Q P R Q G LAVD S +AV+A E +L ++ ++ I +
Sbjct: 130 SFRFVQQTCPMPCFDRVLFQPGEHLAVDPSSRAVAVAANEAQLIVY---VAKPKKQIQSE 186
Query: 194 ICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRR 247
+ S + + SA R Q ++G I +M F+ P ++H +L +++ +R
Sbjct: 187 LQSRSPTWIPVSAQRPMQ---VTGVIQTMEFLV--PPDDDEDHVVLLLVVIEKR 235
>gi|310792058|gb|EFQ27585.1| thermotolerance protein [Glomerella graminicola M1.001]
Length = 1287
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 100/251 (39%), Gaps = 44/251 (17%)
Query: 29 NIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFG 88
N L + +++ + V LRS NDV F + + + + +DG +Q V + FG
Sbjct: 44 NCGILTRTIIESPIARWVLPARLRSAHHNDVAFVGDRYVSINELRKDGQLQEVLRKNDFG 103
Query: 89 TIKDLAVVPWNK----------------KFNAQNSQVMGKDL-----------------L 115
A+V NK K ++ D+ L
Sbjct: 104 CRIRNALVIGNKYEHFRVVAEEAGPDHIKSEDEDDDTQMADISSASATSGPHGLLPPHLL 163
Query: 116 VVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDR 175
++I +SG FL ++H NP +LG +AVD IAV+ +++
Sbjct: 164 LLILESGSFVFLFIRRDLHGKLEFVASPFHNPARRLGRLGFHVAVDPRSRYIAVADAQNK 223
Query: 176 LGLFSL-SMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSK 234
++ L SM S + D+ + + S S + T R +I GTI M F+ PR +
Sbjct: 224 FVVYELESMES---MGDQYMRHKSISPIKTHHPR-----AIQGTILKMEFLY--PRPEDE 273
Query: 235 EHNPILAIILN 245
+H +L I++
Sbjct: 274 QHVILLLIVVK 284
>gi|400600376|gb|EJP68050.1| CPSF A subunit region [Beauveria bassiana ARSEF 2860]
Length = 1174
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 441 SAFVEMGDGMV-LKEENG-----------RLVYT-SPIQNIAPILDMSVVDYHDEKRD-- 485
S V MGDGM+ L +G R +Y + N PILD +++D + D
Sbjct: 349 SNLVYMGDGMLFLASHHGNSQLLRIDLDSRTLYIIKSLSNNGPILDFAIMDMGNRDGDNH 408
Query: 486 ----------QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPY 535
++ A CG +GSLR IRSG+ LE + + + G + ++ + S
Sbjct: 409 QGNVFSSGQTRIVAGCGAYRDGSLRSIRSGVGLEDCVILDEL-ENTRGLFMIKSRGSRLV 467
Query: 536 HSFLVLSFVEETRV-LRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAV 590
LV SFV ETR+ L + ++ D G +V TL + L+Q+ + V
Sbjct: 468 -DVLVASFVTETRIFLMLEDEVEELYDWCGLNLEVETLIAATLPGYDLLQVTRTDV 522
>gi|358056808|dbj|GAA97158.1| hypothetical protein E5Q_03834 [Mixia osmundae IAM 14324]
Length = 1243
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 14/172 (8%)
Query: 389 DKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSEC--LYKGPPCKALLWVEGRFLSAFVEM 446
D P ++ D E +++ + G G +V + L K P +L + ++
Sbjct: 411 DHDPSLLLVGDE-EGYLVSVRIGLQGERVTSLDVVDLGKVPSPTSLTHIADEYVFVGSYY 469
Query: 447 GDGMVLK--------EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGS 498
GD ++ E + S + N+API+D VV D + + C G GS
Sbjct: 470 GDSSLVAIPALTSDGMECDSVSVISAMANLAPIVDFCVV-TDDVGQSHLVTCSGAKNSGS 528
Query: 499 LRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
LR++R G+ L +L T + + W +++ S H +++SF++ +++L
Sbjct: 529 LRLVRQGVGL-SILATIDL-PAVQNAWPLKLASSSIKHDAILVSFLDRSQLL 578
>gi|19114492|ref|NP_593580.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces pombe 972h-]
gi|46395602|sp|O13807.1|DDB1_SCHPO RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|2330717|emb|CAB11219.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces pombe]
Length = 1072
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 452 LKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL 511
+ + N +L NIAPI D + D D+ + C G +G+LRIIR+ I++E +
Sbjct: 341 ITKNNHKLEILQNFVNIAPISDFIIDD--DQTGSSIITCSGAYKDGTLRIIRNSINIENV 398
Query: 512 LRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRV 552
+GI ++V + + Y +++ LS + ETR + V
Sbjct: 399 ALIE--MEGIKDFFSVSFRAN--YDNYIFLSLICETRAIIV 435
>gi|241950247|ref|XP_002417846.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641184|emb|CAX45561.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 1323
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 456 NGRLVYTSPIQNIAPILDMSVVDYHDEK------RDQMFACCGVAPEGSLRIIRSGISLE 509
N RL+ + + AP++D+SV+D K R++++ G+ + L R G +
Sbjct: 485 NARLL--NDFKTWAPLVDISVIDSKQIKDSKLPLRNEIWGVGGIGRKSKLSQFRFGYTAT 542
Query: 510 KLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN----FTDVTDSVGF 565
K T + G W + + VS +L+ S ET +L V + F +++D+
Sbjct: 543 KKSNTYEKLRKAIGLWKLSVNVS----IYLLCSLPFETILLEVQASAKDAFVEISDAY-L 597
Query: 566 RPDVCTLACGLVADGLLVQIHQNAVRL 592
D TL +++DG+++QI N++ L
Sbjct: 598 ITDNSTLYSTVISDGMIIQITSNSITL 624
>gi|449470342|ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cucumis sativus]
Length = 1504
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 486 QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVS------------- 532
++ C G G+L I+R I E + T G G WTV K +
Sbjct: 591 ELVCCSGHGKNGALCILRQSIRPEMI--TEVELPGCKGIWTVYHKNTRGSIADSSRMVPD 648
Query: 533 -DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQIHQNAV 590
D YH++L++S T VL G T+VT+SV + T+A G L ++Q++++
Sbjct: 649 DDEYHAYLIISLEARTMVLVTGELLTEVTESVDYFVHGRTIAAGNLFGRRRVIQVYESGA 708
Query: 591 RL 592
R+
Sbjct: 709 RI 710
>gi|407921024|gb|EKG14193.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
phaseolina MS6]
Length = 1531
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 41/299 (13%)
Query: 23 PASPPRN---IHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQ 79
P PP + L++ VL+ VV + +R+ NDVVF E I+L + + ++
Sbjct: 38 PFKPPMEQPVVGLLSRTVLQSPVVNWIIPARVRNRERNDVVFIGEDFIQLKEVLPNAHLE 97
Query: 80 SVCEQAVFGT-IKDLAVVPWNKKF-------------NAQNSQVMGKDLLVVISDSGKLS 125
V +A FG+ I+ V +KF ++V+ LLV+ +S +L
Sbjct: 98 HVSTKADFGSRIRAARVFGEPRKFIHPPMTEKAQIPAETDWNEVVPPQLLVLTLESQELL 157
Query: 126 FLAFCNEMHRFFPVAQ--VHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFS--- 180
FL + + + LS + Q G+ LAVD +AV A E + +++
Sbjct: 158 FLFARPQRDGTVEWKESCIPLSPDASLLEQPGKHLAVDPRSRALAVGASESSIFIYAAKP 217
Query: 181 LSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPIL 240
+ + D + P +SE + +I GTI M F+ +P EH+ IL
Sbjct: 218 MPELRNNFHHDTQNWTPLKSE---------RPVAIPGTILKMEFLYP---EPDDEHHVIL 265
Query: 241 AIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGPLAHCVVE----VPRSYGFAFVF 295
+I +R G + W+ R+ +S + E PL H +P +G +FV
Sbjct: 266 LVIYSRDGK--TRMSCYEWDHRQ-GLSHIRPVVEGFPLHHNQRNPQLLIPLQHGPSFVL 321
>gi|403177920|ref|XP_003888718.1| hypothetical protein PGTG_22575 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173263|gb|EHS64847.1| hypothetical protein PGTG_22575 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1326
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMVLK--------------EENGRLVYTSPIQNIAPIL 472
P +AL+++ F+ GD +LK ++ T P N+API
Sbjct: 383 PSPEALVYITSGFVFLASHYGDSQLLKLPSPTSSLNPDNTASAQPEVITTFP--NLAPIS 440
Query: 473 DMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVS 532
D V + +Q+ C G +GSLR+I+ GI + + + G+ W +R
Sbjct: 441 DFCVTEDRKSLVNQIVTCSGSHRDGSLRVIKHGIGIRE--SGSLEVGGVQRLWALRSSTH 498
Query: 533 ----DPYHSFLVLSFVEETRVLRVGLNFT--DVTDSVGFRPDVCTLACGLVADG 580
+ + LVLS + TR L + + T ++ GF DV T+ G + DG
Sbjct: 499 VNSVEDFDDRLVLSCADCTRFLALNEDGTIEEIGLFNGFESDVPTILAGNLLDG 552
>gi|449477808|ref|XP_004155129.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cucumis sativus]
Length = 643
Score = 46.2 bits (108), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 486 QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVS------------- 532
++ C G G+L I+R I E + T G G WTV K +
Sbjct: 427 ELVCCSGHGKNGALCILRQSIRPEMI--TEVELPGCKGIWTVYHKNTRGSIADSSRMVPD 484
Query: 533 -DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQIHQNAV 590
D YH++L++S T VL G T+VT+SV + T+A G L ++Q++++
Sbjct: 485 DDEYHAYLIISLEARTMVLVTGELLTEVTESVDYFVHGRTIAAGNLFGRRRVIQVYESGA 544
Query: 591 RL 592
R+
Sbjct: 545 RI 546
>gi|378731606|gb|EHY58065.1| hypothetical protein HMPREF1120_06083 [Exophiala dermatitidis
NIH/UT8656]
Length = 1285
Score = 46.2 bits (108), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 86/213 (40%), Gaps = 32/213 (15%)
Query: 404 FMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSAFVEMGDGMVLK-EENGRLVYT 462
F + G G V + C+ GPP + G + A M DG V G T
Sbjct: 389 FTMNNTIGDLGFDVDTAFCMLAGPPDRG-----GDIIIAGGSMTDGGVFHVSARGSPRRT 443
Query: 463 SPIQNIAPILDMSVVDYHD-------EKRD---QMFACCGVAP-EGSLRIIRSGISLE-K 510
I+NIAP+ DM ++ H E R+ +++AC G L IR G+ +
Sbjct: 444 QIIENIAPVRDM-ILTTHSLAKNRGFESREVSHRLYACSSRGDGRGELSEIRYGLEAQIG 502
Query: 511 LLRTAPIYQGITGTWTVRMKV--------SDPYHSFLVLSFVEETRVLRVGLNFTDVTDS 562
P I W++ + S P H+ ++ SF ET+ ++FTD
Sbjct: 503 WTMECPDAAFIDQIWSLEIMGRKELLLLGSYPTHTIMI-SFDLETQ----DISFTDSQSH 557
Query: 563 VGFRPDVCTLACGLVADGLLVQIHQNAVRLCMP 595
GF D TLA +V + +VQ+ + + P
Sbjct: 558 PGFDFDHPTLAAAVVGNQSIVQVTTKGISMIYP 590
>gi|145348791|ref|XP_001418827.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579057|gb|ABO97120.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1386
Score = 46.2 bits (108), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 18/123 (14%)
Query: 467 NIAPILDMSV-----VDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLR----TAPI 517
+AP++D++V + + +R ++ CG G+L I+ G+ E + T P
Sbjct: 474 GVAPVVDIAVGASAPMGSNKNERTELITACGQGKNGALAILTRGVQPELVTEVESGTLPN 533
Query: 518 YQGITGTWTVRMKVS------DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCT 571
QG+ WT+ + +P+H L+LS T ++ G +V+ S+ F + T
Sbjct: 534 LQGL---WTLHYRKEGSKEEREPFHHHLLLSMKSSTMIMETGEELQEVSASLEFITNQAT 590
Query: 572 LAC 574
LA
Sbjct: 591 LAA 593
>gi|71028348|ref|XP_763817.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350771|gb|EAN31534.1| hypothetical protein TP04_0182 [Theileria parva]
Length = 1231
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 49 GHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQ 108
G +P + + V + +EL + G +Q + FG ++ LA F +Q
Sbjct: 21 GSFSAPKAQEFVVARAHVLELYGLNASGKLQQLVSVEAFGIVRALAA------FRLTGAQ 74
Query: 109 VMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIA 168
+D LVV SDSG++ L + + + F + G R G+ LAVD G +
Sbjct: 75 ---RDYLVVTSDSGRIVILEYSTQTNSFKRLHCETYGKTGVRRIVPGQYLAVDPKGRALM 131
Query: 169 VSAYEDRLGLFSLSMSSGSDI 189
+ A E + ++ L+ S +++
Sbjct: 132 IGAVERQKFVYILNRDSKANL 152
Score = 39.3 bits (90), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITG- 523
+ ++A +DM VVD +F CG + L+ +R G + E+L + + G
Sbjct: 403 MNSMALAVDMKVVDVLGLNNYDIFVACGRWYDSRLKCLRYGFNTEEL-----AFNELPGR 457
Query: 524 ---TWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTL-ACGL--- 576
+T++ + Y ++++SF T VL +G +VTDS F + TL +C +
Sbjct: 458 PKAVFTIK-SLESNYDEYIIISFQGNTLVLSIGEAVEEVTDSF-FLTSITTLHSCHMGST 515
Query: 577 ---VADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIV 633
V G+ VQ+H R +G + + V T+ + V ++ +++V
Sbjct: 516 SGSVGGGIFVQVHDGGFRYL-------TGDVVKEWKVQTT---KRVKLADNNNTQ-LVLV 564
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQK 676
T F L + E+ E+ L +E++C+++ +
Sbjct: 565 LTGGEVIYFQLTEADV----LELVEVGRRNLSTEVTCLAVQHQ 603
>gi|452986188|gb|EME85944.1| hypothetical protein MYCFIDRAFT_59215 [Pseudocercospora fijiensis
CIRAD86]
Length = 1223
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT 524
+ + P++ V + E Q++ G + + IR G+ +E ++ G
Sbjct: 430 VPGLHPLMRTKVDNLTGEDAPQIYGIQGTGNKSLFKTIRHGLDVEIMIDNNMGNVPYDGI 489
Query: 525 WTVRMKVSDPYHSFLVL--SFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLL 582
WT + + SD +H +L++ S+ + T +G + + +S F + T+ + D L
Sbjct: 490 WTFKHRSSDEHHKYLIISSSYGDLTVACSIGDSVEQIENSP-FLENRATVHAQQMGDSTL 548
Query: 583 VQIHQNAVRLCMPT 596
VQ+H +R + T
Sbjct: 549 VQVHARGIRSILET 562
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 62 GKETSIELVIIGEDG---IVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVI 118
G+ + ++ G DG + +VC+Q VFG ++ +A F + D LV+
Sbjct: 45 GQHVMLHRIVQGVDGGDRKLVTVCDQDVFGIVRGVAA------FRIPGTST---DQLVIA 95
Query: 119 SDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNS---RHQLGRMLAVDSSGCLIAVSAYEDR 175
SDSG+++ L + ++ +F + HL G S R G+ LA D+ G I +++ E
Sbjct: 96 SDSGRVTMLTYEHDKQKF---KREHLETYGKSGVRRTIPGQYLASDTRGRCIMLASVEKN 152
Query: 176 LGLFSLSMSSGSDII 190
++ L+ ++ +I+
Sbjct: 153 KVVYMLNRAADGNIL 167
>gi|402579535|gb|EJW73487.1| hypothetical protein WUBG_15606 [Wuchereria bancrofti]
Length = 254
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 533 DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVR 591
D + S +V+SFV T VL +G +VTDS GF TL C L+ D L+Q++ + +R
Sbjct: 11 DKFDSHIVVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLGCALIGDDALLQVYPDGIR 68
>gi|167395195|ref|XP_001741266.1| pre-mRNA-splicing factor rse-1 [Entamoeba dispar SAW760]
gi|165894222|gb|EDR22283.1| pre-mRNA-splicing factor rse-1, putative [Entamoeba dispar SAW760]
Length = 1145
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 147/361 (40%), Gaps = 76/361 (21%)
Query: 440 LSAFVEMGDGMVLKEENGRLVYTS-----------PIQNIAPILDMSVV-DYHDEKRDQM 487
L + M + V E+NGRL + +++AP++D+ V + +M
Sbjct: 355 LYNIISMENINVPLEKNGRLEFERHEEILNLEEFYRFKSLAPLIDLKVAPATSSQDTTKM 414
Query: 488 FACCGVAPEGSLRIIRSGI----SLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSF 543
+A CG + +++I+++ + ++E L PI W ++ K +D YH +L +S+
Sbjct: 415 YAFCGKGNQSTIKILKNQLNTLDAVEIELPAIPI-----SVWPLK-KETDEYHQYLAISY 468
Query: 544 VEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGG 603
T +L++ + ++ +L +++DG +Q+ + +
Sbjct: 469 SNITTLLKITEDEMSECNTTPILLSTPSLLVSMLSDGTFLQVMTDRI------------- 515
Query: 604 IPLSYPVCTSWFPEHVSISLGAVAHNMIIVST--SNPCFLFILGVRSLSVSHYEIYEMQH 661
I S P+ + E+ + + +IVS +N L +S H + M+
Sbjct: 516 IVYSEPI-QQFITENQKYVCASCNGSELIVSVEKNNQTALIYFQYQS---GH--LLTMER 569
Query: 662 MRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRPSVEVLS 721
++++ +++ Q HP + + IG SV +LS
Sbjct: 570 KENLAKITALALDQFHPSQHCA--------------------------IGCVDGSVHLLS 603
Query: 722 FVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPPD 781
+P E + L+ S+ + +++ I + ++ Y+ AGL NG+L R + P
Sbjct: 604 LIPNETTKALSRVSLQTYDCSVNSLTFNI-------IDNKSYLFAGLSNGLLGRSTYDPI 656
Query: 782 S 782
S
Sbjct: 657 S 657
>gi|390347911|ref|XP_783190.3| PREDICTED: splicing factor 3B subunit 3-like, partial
[Strongylocentrotus purpuratus]
Length = 190
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 39 KGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVP 97
+ + ++Q HG+ ++V G+ +EL+ I + G + +V VFG I+ L +P
Sbjct: 10 RATGIVQCIHGNFAGTKQQELVVGRGKLLELIKIDPNTGKLYTVLSHEVFGIIRTL--MP 67
Query: 98 WNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRM 157
+ + KD +VV SDSG++ L + + V Q G R G+
Sbjct: 68 FRLTGGS-------KDFIVVGSDSGRIIILEYNAAKNCLDRVHQETFGKSGCRRIVPGQF 120
Query: 158 LAVDSSGCLIAVSAYEDR 175
LAVD G + V A E +
Sbjct: 121 LAVDPKGRAVMVGALEKQ 138
>gi|391328522|ref|XP_003738737.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Metaseiulus occidentalis]
Length = 1500
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 18/150 (12%)
Query: 458 RLVYTSPIQNIAPILDMSVVD--YHDE---KRD---QMFACCGVAPEGSLRIIRSGISLE 509
+L T +Q + P+ +++ + + E K D ++FA CG G+L +++ + +
Sbjct: 538 KLEVTDRLQTLGPVTKVAMGEPAFQSELSMKTDTEVEIFAACGHERSGALCVLQRTVRPQ 597
Query: 510 KLLRTAPIYQGITGTWTVRM------KVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSV 563
+ T G T WTVR V + H FL+LS + T +L+ G ++ D
Sbjct: 598 VI--TTFELPGCTDLWTVRSSSTRSPDVDEDSHQFLILSRPDSTMILQTGQEINEL-DHS 654
Query: 564 GFRPDVCTLACGLVADG-LLVQIHQNAVRL 592
GF T+ G +ADG ++Q+ N+VRL
Sbjct: 655 GFCTQSPTIFAGNLADGRYIIQVCPNSVRL 684
>gi|356530945|ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Glycine max]
Length = 1449
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 486 QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVS------------- 532
++ C G GSL ++R I E + T G G WTV K +
Sbjct: 537 ELVCCSGHGKNGSLCVLRQSIRPEVI--TEVELPGCKGIWTVYHKSTRSHNADSSKMADD 594
Query: 533 -DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQIHQNAV 590
D YH++L++S T VL ++VT+SV + TLA G L ++Q+++
Sbjct: 595 DDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYERGA 654
Query: 591 RL 592
R+
Sbjct: 655 RI 656
>gi|440300137|gb|ELP92626.1| DNA damage-binding protein, putative [Entamoeba invadens IP1]
Length = 1086
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Query: 447 GDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDE--KRDQMFACCGVAPEGSLRIIRS 504
G+ ++K R+ +N PILDM + HDE K+D + C +G+L+++RS
Sbjct: 313 GNSYLIKIGEERMEVLETFENRGPILDM--ITLHDEISKKDDLLICSNTYHQGTLKLLRS 370
Query: 505 GISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVG 564
G+ + L Y+GI W D + + +E G NF + G
Sbjct: 371 GVGVNILGEVE--YRGIEKMWKCFENAGDMSDDYKEMYVIEGA----FGSNFVHIEGRKG 424
Query: 565 FRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLS 607
+ +A + G +V + +L + T +GGI ++
Sbjct: 425 -DVQIVEIANSVTVKGRIVGVGDFDGKLVVVT----NGGISIA 462
>gi|241952575|ref|XP_002419009.1| pre-mRNA-splicing factor, putative; pre-spliceosome component,
putative [Candida dubliniensis CD36]
gi|223642349|emb|CAX42591.1| pre-mRNA-splicing factor, putative [Candida dubliniensis CD36]
Length = 1187
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 53 SPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMG 111
+ + +V T+++L + E+ G ++ Q + GTI + + S+V G
Sbjct: 36 TKNAQQLVLASYTTLQLFEVNEETGKLELQSSQNLLGTINSIEKICI--------SEVDG 87
Query: 112 KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSA 171
+V+ SDSG LS L + N +F Q ++ G R+ +G LA+D I V+A
Sbjct: 88 ---VVITSDSGNLSILEYDNTSKKFISKIQEPMTKNGWGRNYVGENLAIDPENRCILVAA 144
Query: 172 YEDRLGLFSL-SMSSGSDIIDKKICYPSES 200
E L+ + S SSGS K++ P E+
Sbjct: 145 MEKNKLLYKIESTSSGS----KELSSPLEA 170
>gi|356559917|ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Glycine max]
Length = 1447
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 21/153 (13%)
Query: 459 LVYTSPIQNIAPIL----DMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
L+ P+++ + L D + + ++ C G GSL ++R I E + T
Sbjct: 504 LINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEVI--T 561
Query: 515 APIYQGITGTWTVRMKVS--------------DPYHSFLVLSFVEETRVLRVGLNFTDVT 560
G G WTV K + D YH++L++S T VL ++VT
Sbjct: 562 EVELPGCKGIWTVYHKSTRSHNADSSKMADDDDEYHAYLIISLEARTMVLETADLLSEVT 621
Query: 561 DSVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
+SV + TLA G L ++Q+++ R+
Sbjct: 622 ESVDYYVQGKTLAAGNLFGRCRVIQVYERGARI 654
>gi|116195210|ref|XP_001223417.1| hypothetical protein CHGG_04203 [Chaetomium globosum CBS 148.51]
gi|88180116|gb|EAQ87584.1| hypothetical protein CHGG_04203 [Chaetomium globosum CBS 148.51]
Length = 1127
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 29/223 (13%)
Query: 465 IQNIAPILDMSVVDYH--DEKRD---------QMFACCGVAPEGSLRIIRSGISLEKLLR 513
+ NI PILD +++D DE + ++ C GV +GSLR +RSG+ LE +
Sbjct: 325 LANIGPILDFAIMDMGRGDEGQQGNEYSSGQARIVTCSGVHKDGSLRSVRSGVGLEDVGI 384
Query: 514 TAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDVCT 571
A + + G ++++ + P + L SF+ ETRV + ++ G + T
Sbjct: 385 LADL-EHCRGLFSLKTYEA-PKTNILAASFLTETRVFKFDPQGEVEELDSFAGMTFNQQT 442
Query: 572 LACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMI 631
L ++ ++Q+ AV T++ G+ + SW P + A +N
Sbjct: 443 LLARCLSTAQILQVTPAAV-----TLLDAESGLTID-----SWTPGAQKSIISASGNNKS 492
Query: 632 IVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIP 674
++ + + L + + + + + + Q +++CI +P
Sbjct: 493 LLLSVDGTELVLFSID----INLRLVRTKEIGYQDQIACIHVP 531
>gi|297815870|ref|XP_002875818.1| hypothetical protein ARALYDRAFT_323319 [Arabidopsis lyrata subsp.
lyrata]
gi|297321656|gb|EFH52077.1| hypothetical protein ARALYDRAFT_323319 [Arabidopsis lyrata subsp.
lyrata]
Length = 987
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLE-KLLRTAPIYQGITGTW 525
N P++D S+ + R ++ CCG + SL + +G+ + K P Q I W
Sbjct: 302 NSGPVIDFSLCNKPIGVR-KLVMCCGTHEDSSLEGVSTGVGISVKFFAEIPNIQRI---W 357
Query: 526 TVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDS---VGFRPDVCTLACGLVADGLL 582
+++ + H FLVL + L ++ T S VGF D T+ C AD L
Sbjct: 358 SLKSSSLNDNHPFLVLQPIAVAPALVFTIDDTGAFMSHTMVGFAYDSVTICCHDAADRLF 417
Query: 583 VQIHQNAVRL 592
+Q+ + +VRL
Sbjct: 418 IQVTEKSVRL 427
>gi|68476233|ref|XP_717766.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|68476422|ref|XP_717672.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|74586274|sp|Q5A7S5.1|RSE1_CANAL RecName: Full=Pre-mRNA-splicing factor RSE1
gi|46439394|gb|EAK98712.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|46439495|gb|EAK98812.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
Length = 1219
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 32 YLAKCVLK------GSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQ 84
YL LK S+V Q + + +V T+++L I E+ G ++ Q
Sbjct: 41 YLYNLTLKPPSYYISSIVGQFYKQDNSTKNAQQLVLVSSTTLQLFEINEEAGKLELQSSQ 100
Query: 85 AVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHL 144
+ G I + + S+V G +V+ SDSG LS L + N+ +F Q +
Sbjct: 101 NLLGIINSIEKICL--------SEVDG---VVITSDSGNLSILQYDNKTKKFISKIQEPM 149
Query: 145 SNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSL-SMSSGSDIIDKKICYPSES 200
+ G R+ +G LA+D I V+A E + + S SSGS K++ P E+
Sbjct: 150 TKNGWGRNYVGENLAIDPENRCILVAAMEKNKLFYKIESNSSGS----KELSSPLEA 202
>gi|331247470|ref|XP_003336363.1| DNA damage-binding protein 1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 962
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 427 PPCKALLWVEGRFLSAFVEMGDGMVLK--------------EENGRLVYTSPIQNIAPIL 472
P +AL+++ F+ GD +LK ++ T P N+API
Sbjct: 48 PSPEALVYITSGFVFLASHYGDSQLLKLPSPTSSLNPDNTASAQPEVITTFP--NLAPIS 105
Query: 473 DMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVS 532
D V + +Q+ C G +GSLR+I+ GI + + + G+ W +R
Sbjct: 106 DFCVTEDRKSLVNQIVTCSGSHRDGSLRVIKHGIGIRE--SGSLEVGGVQRLWALRSSTH 163
Query: 533 ----DPYHSFLVLSFVEETRVLRVGLNFT--DVTDSVGFRPDVCTLACGLVADG 580
+ + LVLS + TR L + + T ++ GF DV T+ G + DG
Sbjct: 164 VNSVEDFDDRLVLSCADCTRFLALNEDGTIEEIGLFNGFESDVPTILAGNLLDG 217
>gi|84996279|ref|XP_952861.1| splicing factor 3b subunit [Theileria annulata strain Ankara]
gi|65303859|emb|CAI76236.1| splicing factor 3b subunit, putative [Theileria annulata]
Length = 1340
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 47 AHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
G +P + + V + +EL + G +Q + FG ++ LA
Sbjct: 19 VQGSFSAPKAQEFVVARSHILELYSLNSLGKLQQLVSVEAFGIVRALAAFRLTGAL---- 74
Query: 107 SQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCL 166
KD L V SDSG+L L + + + F + G R G+ LAVD G
Sbjct: 75 -----KDYLAVTSDSGRLVILEYSTQTNSFKRIHSETYGKTGVRRIVPGQYLAVDPKGRA 129
Query: 167 IAVSAYEDRLGLFSLSMSSGSDI 189
I + A E + ++ L+ + +++
Sbjct: 130 IMIGAIERQKFVYILNRDTKANL 152
Score = 39.3 bits (90), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 132/360 (36%), Gaps = 103/360 (28%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + ++ ++DM V D +F CG L+ +R G + E+L +
Sbjct: 450 LVVVDRMSSMGLVVDMKVADVMGLNNYDIFVACGRWYNSRLKCLRYGFNTEEL-----AF 504
Query: 519 QGITG----TWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
+ G +T++ + + ++++SF T VL +G +VTDS F + TL C
Sbjct: 505 NELPGRPKHVFTIK-SLESNFDEYIIISFQGNTLVLSIGEAVEEVTDSF-FLTSITTLHC 562
Query: 575 ----------------------------GL-------VADGLLVQIHQNAVRLCMPTMVA 599
G+ + G+ VQIH R
Sbjct: 563 CYMSYRNGVSSSGVGGVSGVSGVGTVTNGVPVTGGTGITRGIYVQIHDGGYRY------- 615
Query: 600 HSGGIPLSYPVCTSWFPEHVSISLGAVAHN----MIIVSTSNPCFLFILGVRSLSVSHYE 655
LS + W + S +A N +I+V T F L + E
Sbjct: 616 ------LSGDIIKEWKVQ--STKRVKLADNNDTQLILVLTGGEIIYFQLTDTEVP----E 663
Query: 656 IYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFVIGTHRP 715
+ E+ L +E++C++I +HP S + S+ +
Sbjct: 664 LVEVGRRNLSTEITCLAI--QHP---NSGTKAEFCCCGSIDNI----------------- 701
Query: 716 SVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLR 775
V ++ + L+ L S I+ N++ P+ V L+ D+ Y+ GL NG+L+R
Sbjct: 702 -VRIMKL--DKNLK-LCSSQILGNNSL--------PESVTLLTNDEIYLYVGLNNGVLIR 749
>gi|402223178|gb|EJU03243.1| hypothetical protein DACRYDRAFT_115454 [Dacryopinax sp. DJM-731
SS1]
Length = 1175
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+API D V D + Q+ G GSLR++RSG++ E+L + + + T +
Sbjct: 397 NLAPISDFVVTDPEKIGQQQIVTASGRMNTGSLRVVRSGVAFEEL----GLLEQVMNTRS 452
Query: 527 V---RMKVSDPYHSFLVLSFVEETRVLRV-------GLNFTDVTDSVGFRPDVCTLACGL 576
+ ++ YH +LV S + T + + D +++ G V TLA G
Sbjct: 453 IFPLKINFDAEYHLYLVTSSLHRTTLYSMRGDDSSPQFEEVDESEARGIVRQVPTLAAGN 512
Query: 577 V-ADGLLVQIHQNAV 590
+ D + VQ+ +V
Sbjct: 513 IREDDIFVQVTAGSV 527
>gi|346321204|gb|EGX90804.1| DNA damage-binding protein 1 [Cordyceps militaris CM01]
Length = 1160
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 128/305 (41%), Gaps = 47/305 (15%)
Query: 332 VDESCRVHDVDDEG----LFNVAACALLELRDYDPMCIDSDSGNAKEPSKHVCSWSWEPE 387
V E R H ++EG L + L +D + S S EP +V +W+ E
Sbjct: 238 VAEEKRYHVRNNEGTRAHLGGLLVVGETLLTYFDSLTYSSVSSVLDEPKIYV-AWAMYDE 296
Query: 388 TDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECL---YKGPPCK-------ALLWVEG 437
T D G ++ + S+ V ++ K P K +L+++ G
Sbjct: 297 T----HYFLADDYGRLDLLTLQTHSEQTGVVVNRMTVEPLKFPDSKNLTSRASSLVYMGG 352
Query: 438 RFLSAFVEMGDGMVLKEE-NGRLVYTSPIQ---NIAPILDMSVVDYHDEKRD-------- 485
L GD +L+ + + R ++ PI+ N PILD +++D + D
Sbjct: 353 GMLVVASHHGDSQLLQIDIDSRTMH--PIKLLSNNGPILDFAIMDMGNRDGDNLQGNLFS 410
Query: 486 ----QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGT---WTVRMKVSDPYHSF 538
++ A CG +GSLR IRSG+ LE L I + I T +T++ + S +
Sbjct: 411 SGQARIVAGCGAYRDGSLRSIRSGVGLEDL----GILEEIKNTRRLFTIKSRRSKKVDT- 465
Query: 539 LVLSFVEETRVLRVGL--NFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPT 596
LV ++ +TRV G + +V + G V +L + +G L+Q+ + V + P
Sbjct: 466 LVACYILDTRVFLFGADGDIQEVNNFPGLNLRVESLLVVNLPNGRLLQVTRMDVTIKDPN 525
Query: 597 MVAHS 601
A +
Sbjct: 526 EQAKA 530
>gi|336469942|gb|EGO58104.1| pre-mRNA splicing factor RSE1 [Neurospora tetrasperma FGSC 2508]
Length = 1192
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 94/227 (41%), Gaps = 36/227 (15%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I ++ P +D V + E Q+++ CG + R+++ G+ + +++ + +
Sbjct: 414 LVLVESIDSMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIV-ASELP 472
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WT ++ T+ +G +V+DS GF TLA +
Sbjct: 473 GTPSAVWTTKL-----------------TKYDHIGETVEEVSDS-GFLTTAPTLAVQQMG 514
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ L+Q+H +R + V +P P+H SI N ++++ S+
Sbjct: 515 EDGLIQVHPKGIRHIVQGRVNE-------WPA-----PQHRSIVAATANENQVVIALSSG 562
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
++ S++ Y+ + + ++ +S+ Q PE K SS
Sbjct: 563 EIVYFEMDSDGSLAEYD----EKKEMSGTVTSLSVGQV-PEGLKRSS 604
>gi|164429062|ref|XP_957282.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
gi|157072394|gb|EAA28046.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
Length = 1192
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 94/227 (41%), Gaps = 36/227 (15%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV I ++ P +D V + E Q+++ CG + R+++ G+ + +++ + +
Sbjct: 414 LVLVESIDSMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIV-ASELP 472
Query: 519 QGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVA 578
+ WT ++ T+ +G +V+DS GF TLA +
Sbjct: 473 GTPSAVWTTKL-----------------TKYDHIGETVEEVSDS-GFLTTAPTLAVQQMG 514
Query: 579 DGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNP 638
+ L+Q+H +R + V +P P+H SI N ++++ S+
Sbjct: 515 EDGLIQVHPKGIRHIVQGRVNE-------WPA-----PQHRSIVAATANENQVVIALSSG 562
Query: 639 CFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS 685
++ S++ Y+ + + ++ +S+ Q PE K SS
Sbjct: 563 EIVYFEMDSDGSLAEYD----EKKEMSGTVTSLSVGQV-PEGLKRSS 604
>gi|226287561|gb|EEH43074.1| thermotolerance protein [Paracoccidioides brasiliensis Pb18]
Length = 1262
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 9 STAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIE 68
++ + S PS ++ P + L++ V+ G ++ +V +R +D+VF + I+
Sbjct: 30 TSGDATSKPSRTTVPIT-----GVLSRTVIPGPMIQRVLPARIRHRDKHDIVFVGDDFIQ 84
Query: 69 LVIIGEDGIVQSVCEQAVFGT-IKDLAVVPWNKKFNAQNSQVMGKDL------------- 114
+ + G ++ + +A F T I D V+ N + +V+G +L
Sbjct: 85 VKELVAGGHLEDIATKADFDTKILDAKVIGSNGVTALEAEKVLGAELGASASKLLDDSWH 144
Query: 115 ---LVVISDSGKLSFLAFCN--EMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAV 169
LV++ S +L FL + F + L + +S Q GR +A+D S +A+
Sbjct: 145 RQILVLVLASKELLFLYGTEGPSGNPEFTFVRRPLPSDVSSLEQYGRYIAIDPSSRAMAI 204
Query: 170 SAYEDRLGLFSLSMSS 185
SA G+FSL + S
Sbjct: 205 SAAYKFFGVFSLKLPS 220
>gi|328773280|gb|EGF83317.1| hypothetical protein BATDEDRAFT_21894 [Batrachochytrium
dendrobatidis JAM81]
Length = 1673
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 26/171 (15%)
Query: 445 EMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMF------------ACCG 492
E G G ++ E+ R + ++P+ D +V E + F A G
Sbjct: 544 EHGHGEIVSEQTLRFRLCDSVTVVSPLRDFAV-GLPAETSEHRFSPKIGGCDLEIVAATG 602
Query: 493 VAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVR-----------MKVSDPYHSFLVL 541
P G L I+ + +++ T + Q I WT+R + +D +H +++L
Sbjct: 603 HGPHGHLAILNRSVR-PQIVTTFELPQ-IEEMWTIRCAKFDKDYRLVSEPTDAFHKYVIL 660
Query: 542 SFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRL 592
S T +L+ G FT++ D+ ++ L+ + ++VQ+H N V L
Sbjct: 661 SHSSGTSILKAGEAFTEMDDTTFYQAGPTVGVGALLDETIIVQVHPNGVIL 711
>gi|238880502|gb|EEQ44140.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1168
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 32 YLAKCVLK------GSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQ 84
YL LK S+V Q + + +V T+++L I E+ G ++ Q
Sbjct: 37 YLYNLTLKPPSYYISSIVGQFYKQDNSTKNAQQLVLVSSTTLQLFEINEETGKLELQSSQ 96
Query: 85 AVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHL 144
+ G I + + S+V G +V+ SDSG LS L + N+ +F Q +
Sbjct: 97 NLLGIINSIEKICL--------SEVDG---VVITSDSGNLSILQYDNKTKKFISKIQEPM 145
Query: 145 SNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSL-SMSSGSDIIDKKICYPSES 200
+ G R+ +G LA+D I V+A E + + S SSGS K++ P E+
Sbjct: 146 TKNGWGRNYVGENLAIDPENRCILVAAMEKNKLFYKIESNSSGS----KELSSPLEA 198
>gi|453087531|gb|EMF15572.1| splicing factor 3B subunit 3 [Mycosphaerella populorum SO2202]
Length = 1223
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 78 VQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFF 137
+ +VC+Q VFG ++ +A A D LV+ SDSG+++ L + NE F
Sbjct: 64 ITTVCDQDVFGIVRGVA---------AFRIPATATDQLVISSDSGRVAMLQYDNEKSAF- 113
Query: 138 PVAQVHLSNPGNS---RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDII 190
+VHL G S R G+ LA D G I +++ E ++ L+ S I+
Sbjct: 114 --KRVHLETYGKSGVRRTIPGQYLASDPRGRCIMMASVEKNKVVYMLNRDSNGTIL 167
>gi|326469377|gb|EGD93386.1| splicing factor 3B subunit 3 [Trichophyton tonsurans CBS 112818]
Length = 1188
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G VQ++ Q VFG I+ LA F S KD +++ SDSG+++ + + +R
Sbjct: 54 GKVQTLYSQDVFGIIRSLAA------FRLAGS---SKDYIIIGSDSGRITIVEYVPAQNR 104
Query: 136 FFPVAQVHLSNPGNS---RHQLGRMLAVDSSG--CLIA 168
F ++HL G S R G+ LAVD G CLIA
Sbjct: 105 F---NRIHLETFGKSGVRRVVPGQYLAVDPKGRACLIA 139
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 105/261 (40%), Gaps = 58/261 (22%)
Query: 455 ENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
EN LV + I ++ P++ S+ + +E Q++ CG R +E L +
Sbjct: 409 ENLNLVES--IASLNPLMAASITNITEEDAPQIYTLCGTGA-------RISEIVESELPS 459
Query: 515 APIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLAC 574
P + WT ++ +D + +++VL +G +VTD+ GF TLA
Sbjct: 460 VP-----SAVWTTKLSRNDQFDAYIVL----------IGETVEEVTDT-GFLSSAPTLAV 503
Query: 575 GLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+ + L+Q+H +R H+ +P P+H SI + ++
Sbjct: 504 QQLGEDSLIQVHPKGIRHI------HADQRVNEWPA-----PQHRSIVAATTNERQVAIA 552
Query: 635 TSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISIPQKHPERRKSSS--------- 685
S+ ++ S++ Y+ + ++ ++C+S+ + PE R SS
Sbjct: 553 LSSGEIVYFEMDTDGSLAEYD----EKRQMSGTVTCLSLGEV-PEGRVRSSFLAVGCDDS 607
Query: 686 --------PISLVSNSSVPAL 698
P S + N SV AL
Sbjct: 608 TVRILSLDPDSTLENKSVQAL 628
>gi|344300987|gb|EGW31299.1| hypothetical protein SPAPADRAFT_140061 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1107
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 50 HLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQ 108
H + P + +V T I+LV D G +Q + Q V G I +V+ +
Sbjct: 27 HPKDPATQFLVLISPTHIDLVQPNPDTGKLQLIHHQKVIGVINQASVI-----------R 75
Query: 109 VMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIA 168
V D +VV SDSG LS L F + +F P + ++ G R G LAVD S +
Sbjct: 76 VEELDHVVVTSDSGNLSVLKF--DGTKFVPAMNIGMTKNGWGRTYPGEFLAVDPSNRCVF 133
Query: 169 VSAYE 173
SA E
Sbjct: 134 TSAVE 138
>gi|218194461|gb|EEC76888.1| hypothetical protein OsI_15095 [Oryza sativa Indica Group]
Length = 1503
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 486 QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTV-------RMKVSDPYHSF 538
++ C G GSL +++ I + L T G WTV +M + YH++
Sbjct: 545 ELVCCSGHGKNGSLSVLQQSIRPD--LITEVELPSCRGIWTVYYKSYRGQMAEDNEYHAY 602
Query: 539 LVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
L++S T VL G + +VT++V + T+A G L ++Q++ R+
Sbjct: 603 LIISLENRTMVLETGDDLGEVTETVDYFVQASTIAAGNLFGRRRVIQVYGKGARV 657
>gi|46110140|ref|XP_382128.1| hypothetical protein FG01952.1 [Gibberella zeae PH-1]
Length = 1334
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 121/296 (40%), Gaps = 42/296 (14%)
Query: 13 SRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVII 72
S S P ++S + L++ +++ VV V LRS ++ND+ F + +++ +
Sbjct: 27 SSSVPKTASDQHTEKPACGILSRTIIESPVVHWVLPVLLRSRSNNDLAFIGDRFVQISEL 86
Query: 73 GEDGIVQSVCEQAVFGT-IKDLAVV------------PWNKK--------------FNAQ 105
EDG V V +A FGT I++ AV+ P + K + A
Sbjct: 87 REDGQVHEVIRKADFGTRIRNAAVLGAVPGVGTKGARPGSIKTEDTDVAMQDDSMMYEAD 146
Query: 106 NSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGC 165
+ LLV++ ++G FL + +P N + LG LA+D S
Sbjct: 147 GQHTLPPQLLVLMLETGDAVFLFIRQRLDGTLEFVTTKYESPRNLQF-LGYHLAIDPSSR 205
Query: 166 LIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFI 225
+A + + ++ L S + + + + S V T R Q G I M F+
Sbjct: 206 YLAAGSAQGAFIIYEL--ESLTTMNSQFRHHGSFKPVKTIRVRTTQ-----GVIHKMEFL 258
Query: 226 STDPRQPSKEHNPILAIILNR---RGALLNELLLVGWNIREHAISVLSCFFEAGPL 278
PR H +L I+++R + ++ +++ W + + +VL E G L
Sbjct: 259 H--PRPEDDYHIILLLIVIHREINKQGHISRMVVYDWELGDELSTVLRS--EKGTL 310
>gi|222628488|gb|EEE60620.1| hypothetical protein OsJ_14038 [Oryza sativa Japonica Group]
Length = 1441
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 486 QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTV-------RMKVSDPYHSF 538
++ C G GSL +++ I + L T G WTV +M + YH++
Sbjct: 545 ELVCCSGHGKNGSLSVLQQSIRPD--LITEVELPSCRGIWTVYYKSYRGQMAEDNEYHAY 602
Query: 539 LVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
L++S T VL G + +VT++V + T+A G L ++Q++ R+
Sbjct: 603 LIISLENRTMVLETGDDLGEVTETVDYFVQASTIAAGNLFGRRRVIQVYGKGARV 657
>gi|75145059|sp|Q7XWP1.2|CPSF1_ORYSJ RecName: Full=Probable cleavage and polyadenylation specificity
factor subunit 1; AltName: Full=Cleavage and
polyadenylation specificity factor 160 kDa subunit;
Short=CPSF 160 kDa subunit
gi|38345987|emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group]
Length = 1441
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 486 QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTV-------RMKVSDPYHSF 538
++ C G GSL +++ I + L T G WTV +M + YH++
Sbjct: 545 ELVCCSGHGKNGSLSVLQQSIRPD--LITEVELPSCRGIWTVYYKSYRGQMAEDNEYHAY 602
Query: 539 LVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
L++S T VL G + +VT++V + T+A G L ++Q++ R+
Sbjct: 603 LIISLENRTMVLETGDDLGEVTETVDYFVQASTIAAGNLFGRRRVIQVYGKGARV 657
>gi|353235645|emb|CCA67655.1| hypothetical protein PIIN_01483 [Piriformospora indica DSM 11827]
Length = 1145
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Query: 445 EMGDGMVLK-EENGRLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIR 503
E GD ++K +G+L N API D + D + + C G GSLR IR
Sbjct: 341 ETGDSQLMKITSSGKLEVIDTFSNTAPIADAVLADLDNTGDHVVVTCSGNGRTGSLRTIR 400
Query: 504 SGISLEKL--LRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVL 550
SG ++E+L + T+ + I + S H ++++S+ +ET+++
Sbjct: 401 SGANIEELASMETSIPIKNIFPL----QETSGTSHLYMLISYDQETKLV 445
>gi|350637923|gb|EHA26279.1| hypothetical protein ASPNIDRAFT_46769 [Aspergillus niger ATCC 1015]
Length = 1258
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 19/172 (11%)
Query: 29 NIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFG 88
I L+ ++ ++ + HLRS NDVVF E +++ ++ V ++ F
Sbjct: 15 KIGLLSHTLVSSPIIQWILPAHLRSKDQNDVVFVGERHLQIKEAVSGVHLEEVTTKSDFD 74
Query: 89 TIKDLAVV-------PWNK--KFNAQNS---------QVMGKDLLVVISDSGKLSFLAFC 130
+ A V PW + K A NS Q + +LV+ S +L FL F
Sbjct: 75 SCIMAAKVVNVSTELPWEEEMKLGASNSTLRANSDLRQDLPPQILVLSLASKELVFLYFS 134
Query: 131 NEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLS 182
N F + L N ++ + GR +AV+ +AVSA D G+F L
Sbjct: 135 NASGHFV-YHRRPLPNDVSAFERFGRNIAVEPRSRAVAVSASSDYFGIFVLK 185
>gi|225455571|ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Vitis vinifera]
Length = 1442
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 17/122 (13%)
Query: 486 QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVS------------- 532
++ C G G+L I++ I E + T G G WTV K +
Sbjct: 535 ELVCCSGHGKNGALCILQQSIRPEMI--TEVELPGCKGIWTVYHKNTRGHNADSTKMATK 592
Query: 533 -DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQIHQNAV 590
D YH++L++S T VL +VT+SV + CT++ G L +VQ++
Sbjct: 593 DDEYHAYLIISLESRTMVLETADLLGEVTESVDYYVQGCTISAGNLFGRRRVVQVYARGA 652
Query: 591 RL 592
R+
Sbjct: 653 RI 654
>gi|296084122|emb|CBI24510.3| unnamed protein product [Vitis vinifera]
Length = 1448
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 17/122 (13%)
Query: 486 QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVS------------- 532
++ C G G+L I++ I E + T G G WTV K +
Sbjct: 541 ELVCCSGHGKNGALCILQQSIRPEMI--TEVELPGCKGIWTVYHKNTRGHNADSTKMATK 598
Query: 533 -DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQIHQNAV 590
D YH++L++S T VL +VT+SV + CT++ G L +VQ++
Sbjct: 599 DDEYHAYLIISLESRTMVLETADLLGEVTESVDYYVQGCTISAGNLFGRRRVVQVYARGA 658
Query: 591 RL 592
R+
Sbjct: 659 RI 660
>gi|134054811|emb|CAK43651.1| hypothetical protein An01g02850 [Aspergillus niger]
Length = 1278
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 29 NIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFG 88
I L+ ++ ++ + HLRS NDVVF E +++ ++ V ++ F
Sbjct: 35 KIGLLSHTLVSSPIIQWILPAHLRSKDQNDVVFVGERHLQIKEAVSGVHLEEVTTKSDFD 94
Query: 89 TIKDLAVV-------PWNK--KFNAQNS---------QVMGKDLLVVISDSGKLSFLAFC 130
+ A V PW + K A NS Q + +LV+ S +L FL F
Sbjct: 95 SCIMAAKVVNVSTELPWEEEMKLGASNSTLRANSDLRQDLPPQILVLSLASKELVFLYFS 154
Query: 131 NEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSL 181
N F + L N ++ + GR +AV+ +AVSA D G+F L
Sbjct: 155 NASGHFV-YHRRPLPNDVSAFERFGRNIAVEPRSRAVAVSASSDYFGIFVL 204
>gi|156049323|ref|XP_001590628.1| hypothetical protein SS1G_08368 [Sclerotinia sclerotiorum 1980]
gi|154692767|gb|EDN92505.1| hypothetical protein SS1G_08368 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1153
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 125/315 (39%), Gaps = 46/315 (14%)
Query: 382 WS-WEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKG---PPCKALLWVEG 437
W+ WEP D+ + D G ++ I DG V + L G P G
Sbjct: 288 WAAWEPIDDR--NYLLGDDYGFLYLFTILV--DGATVTGMKVLKLGQVSKPTSLENLGNG 343
Query: 438 RFLSAFVEMGDGMVLKEENGRLVYTSPIQ----NIAPILDMSVVDY-----------HDE 482
F A E D V++ + G Y+ + NIAPILD +++D +
Sbjct: 344 VFYVASHE-ADNQVIQIDLGSPNYSVTVLQVLPNIAPILDFTIMDMGGREGQTQLNEYSS 402
Query: 483 KRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLS 542
+ ++ G GSLR +RSG+ L+ + A + +GI + + S P + LV+S
Sbjct: 403 GQARLVTGSGGFEGGSLRSVRSGVGLDDIAILAEM-EGIHKVFALHSGPSLP-NDTLVVS 460
Query: 543 FVEETRVLRVGLNFTDVTDSVGFRPDVCTLA-CGLVADGLLVQIHQNAVRLCMPTMVAHS 601
F ETR + DS+G +V T++ ++ LL N C+ + H
Sbjct: 461 FSTETRFFKF--------DSLGDIEEVNTISNLSAASETLLTYNLDNG---CILQVTQHE 509
Query: 602 GGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQH 661
I P W P I A + I+ +SN L L + + E+
Sbjct: 510 VAIHGKSP-GHRWQPPDGQIITAASGNQNYILLSSNGRTLVTLSIEQ------NLAEVAF 562
Query: 662 MRL-QSELSCISIPQ 675
L +++CI +PQ
Sbjct: 563 QELGDDQVACIHVPQ 577
>gi|317026000|ref|XP_001388719.2| thermotolerance protein [Aspergillus niger CBS 513.88]
Length = 1213
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 29 NIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFG 88
I L+ ++ ++ + HLRS NDVVF E +++ ++ V ++ F
Sbjct: 35 KIGLLSHTLVSSPIIQWILPAHLRSKDQNDVVFVGERHLQIKEAVSGVHLEEVTTKSDFD 94
Query: 89 TIKDLAVV-------PWNK--KFNAQNS---------QVMGKDLLVVISDSGKLSFLAFC 130
+ A V PW + K A NS Q + +LV+ S +L FL F
Sbjct: 95 SCIMAAKVVNVSTELPWEEEMKLGASNSTLRANSDLRQDLPPQILVLSLASKELVFLYFS 154
Query: 131 NEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSL 181
N F + L N ++ + GR +AV+ +AVSA D G+F L
Sbjct: 155 NASGHFV-YHRRPLPNDVSAFERFGRNIAVEPRSRAVAVSASSDYFGIFVL 204
>gi|256075924|ref|XP_002574265.1| Splicing factor 3B subunit 3 5' fragment [Schistosoma mansoni]
Length = 982
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 533 DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVR 591
+ Y +++++SFV T VL +G +VTDS GF TL C + D LVQ++ + +R
Sbjct: 431 EEYDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLTCSQLGDDALVQVYPDGIR 488
>gi|225678070|gb|EEH16354.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 1054
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 24/196 (12%)
Query: 9 STAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIE 68
++ + S PS ++ P + L++ V+ G ++ +V +R +D+VF + I+
Sbjct: 30 TSGDATSKPSRTTVPIT-----GVLSRTVIPGPMIQRVLPARIRHRDKHDIVFVGDDFIQ 84
Query: 69 LVIIGEDGIVQSVCEQAVFGT-IKDLAVVPWNKKFNAQNSQVMGKDL------------- 114
+ + G ++ + +A F T I D V+ N +V+G +L
Sbjct: 85 VKELVAGGHLEDIATKADFDTKILDAKVIGSNGVTALDAEKVLGAELGASASKLLDDSWH 144
Query: 115 ---LVVISDSGKLSFLAFCN--EMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAV 169
LV++ S +L FL + F + L + +S Q GR +A+D S +A+
Sbjct: 145 RQILVLVLASKELLFLYGTEGPSGNPEFTFVRRPLPSDVSSLEQYGRYIAIDPSSRAMAI 204
Query: 170 SAYEDRLGLFSLSMSS 185
SA G+FSL + S
Sbjct: 205 SAAYKFFGVFSLKLPS 220
>gi|350645868|emb|CCD59413.1| Splicing factor 3B subunit 3, 5' fragment [Schistosoma mansoni]
Length = 1073
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 533 DPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVR 591
+ Y +++++SFV T VL +G +VTDS GF TL C + D LVQ++ + +R
Sbjct: 431 EEYDAYIIVSFVNATLVLSIGETVEEVTDS-GFLGTTPTLTCSQLGDDALVQVYPDGIR 488
>gi|154275120|ref|XP_001538411.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414851|gb|EDN10213.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1261
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 28/199 (14%)
Query: 4 SEEVCSTAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGK 63
S +V + S PS P + L++ V+ G V+ +V LR +D+VF
Sbjct: 26 SNQVTLNDDAASKPSRRKVPLT-----GLLSRTVIPGPVIQRVLPARLRHRNKDDIVFVG 80
Query: 64 ETSIELVIIGEDGIVQSVCEQAVFGT-IKDLAVV--PWNKKFNAQNSQVMG--------- 111
+ I++ + G ++ V +A F T I D V+ P N Q + +G
Sbjct: 81 DNFIQIKELVTSGYLEDVTTKADFDTKILDAKVIGDPGNVIPELQLGEGVGLGSSSRMPS 140
Query: 112 -----KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNP----GNSRHQLGRMLAVDS 162
+ +LV++ S +L FL + E P +H+ P +S Q GR +A+D
Sbjct: 141 EDHWHRQILVLVLASRELLFL-YGTESFSGRP-EFIHVRRPLPSDVSSLEQYGRYIAIDP 198
Query: 163 SGCLIAVSAYEDRLGLFSL 181
+AVSA G+FSL
Sbjct: 199 RSRAMAVSAAHKFFGIFSL 217
>gi|325096352|gb|EGC49662.1| thermotolerance protein [Ajellomyces capsulatus H88]
Length = 1294
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 20/200 (10%)
Query: 6 EVCSTAKSRSSPSSSSAPASPPRNIH-YLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKE 64
E+ S + + ++S P+ P + L++ V+ G V+ +V LR +D+VF +
Sbjct: 22 EIMSNNQVTLNDDAASKPSRPKVPLTGLLSRTVIPGPVIQRVLPARLRHRNKDDIVFVGD 81
Query: 65 TSIELVIIGEDGIVQSVCEQAVFGT-IKDLAVV--PWNKKFNAQNSQVMG---------- 111
I++ + G ++ V +A F T I D V+ P N Q + +G
Sbjct: 82 NFIQIKELVTSGYLEDVTTKADFDTKILDAKVIGDPGNVIPELQLGEGVGLGSSSSMPSD 141
Query: 112 ----KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN--SRHQLGRMLAVDSSGC 165
+ +LV++ S +L FL + V P + S Q GR +A+D
Sbjct: 142 DHWHRQILVLVLASRELLFLYGAESLSGRPEFIHVRRPLPSDVSSLEQYGRYIAIDPRSR 201
Query: 166 LIAVSAYEDRLGLFSLSMSS 185
+AVSA G+FSL S
Sbjct: 202 AMAVSAAHKFFGIFSLKSPS 221
>gi|240278328|gb|EER41835.1| thermotolerance protein [Ajellomyces capsulatus H143]
Length = 1275
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 20/200 (10%)
Query: 6 EVCSTAKSRSSPSSSSAPASPPRNIH-YLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKE 64
E+ S + + ++S P+ P + L++ V+ G V+ +V LR +D+VF +
Sbjct: 22 EIMSNNQVTLNDDAASKPSRPKVPLTGLLSRTVIPGPVIQRVLPARLRHRNKDDIVFVGD 81
Query: 65 TSIELVIIGEDGIVQSVCEQAVFGT-IKDLAVV--PWNKKFNAQNSQVMG---------- 111
I++ + G ++ V +A F T I D V+ P N Q + +G
Sbjct: 82 NFIQIKELVTSGYLEDVTTKADFDTKILDAKVIGDPGNVIPELQLGEGVGLGSSSSMPSD 141
Query: 112 ----KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN--SRHQLGRMLAVDSSGC 165
+ +LV++ S +L FL + V P + S Q GR +A+D
Sbjct: 142 DHWHRQILVLVLASRELLFLYGAESLSGRPEFIHVRRPLPSDVSSLEQYGRYIAIDPRSR 201
Query: 166 LIAVSAYEDRLGLFSLSMSS 185
+AVSA G+FSL S
Sbjct: 202 AMAVSAAHKFFGIFSLKSPS 221
>gi|225557646|gb|EEH05932.1| thermotolerance protein [Ajellomyces capsulatus G186AR]
Length = 1301
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 4 SEEVCSTAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGK 63
S +V + S PS P + L++ V+ G V+ +V LR +D+VF
Sbjct: 26 SNKVTLNDDASSKPSRRKVPLT-----GLLSRTVIPGPVIQRVLPARLRHRNKDDIVFVG 80
Query: 64 ETSIELVIIGEDGIVQSVCEQAVFGT-IKDLAVV--PWNKKFNAQNSQVMG--------- 111
+ I++ + G ++ V +A F T I D V+ P N Q + +G
Sbjct: 81 DNFIQIKELVASGYLEEVTTKADFDTKILDAKVIGDPGNVIPELQLREGVGLGSSSSMPS 140
Query: 112 -----KDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN--SRHQLGRMLAVDSSG 164
+ +LV++ S +L FL + V P + S Q GR +A+D
Sbjct: 141 DDHWHRQILVLVLASRELLFLYGAESLSGRPEFIHVRRPLPSDVSSLEQYGRYIAIDPRS 200
Query: 165 CLIAVSAYEDRLGLFSLSMSS 185
+AVSA G+FSL S
Sbjct: 201 RAMAVSAAHKFFGIFSLKSPS 221
>gi|452845763|gb|EME47696.1| hypothetical protein DOTSEDRAFT_69599 [Dothistroma septosporum
NZE10]
Length = 1317
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 27/251 (10%)
Query: 15 SSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGE 74
S SS+ PAS + K ++ V+ + H +R NDVV+ E S+E+ +G
Sbjct: 4 SDDESSAWPASDLDRLAVYTKTQVRSPVIRWILHAQIRHKLQNDVVYIGEDSLEVKQVGS 63
Query: 75 DGIVQSVCEQ----------AVFGTIKDLAVVPWNKKFNAQNSQVMG------KDLLVVI 118
G V + AVF D + K A + + + +L+ +
Sbjct: 64 HGHQTLVATKNDFDAHIRAAAVFNNEDDSETEDFLVKLEADSKNTLHISAYPPQSILLTL 123
Query: 119 SDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSR--HQLGRMLAVDSSGCLIAVSAYEDRL 176
DS L FL + + Q + P R Q G LAVD A +A+E +
Sbjct: 124 -DSNDLVFLYMRQDSQGYPMFIQQSVPMPSFDRILFQPGEYLAVDPFSRAFATAAHEREV 182
Query: 177 GLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEH 236
L+S + I +I S S+ R Q + G I M F+ P +H
Sbjct: 183 LLYS---AKPKQQIQHEIRTQSRDWCPVSSQRPLQ---VEGVILQMDFLV--PPADEVDH 234
Query: 237 NPILAIILNRR 247
+L I+ ++R
Sbjct: 235 IILLLIVADQR 245
>gi|328872326|gb|EGG20693.1| hypothetical protein DFA_00554 [Dictyostelium fasciculatum]
Length = 1355
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 28/240 (11%)
Query: 100 KKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLS--NPGNSRHQLGRM 157
KK +S +D+LVV SDS LSF+++ N + +F + Q +S N LG
Sbjct: 207 KKEKYIDSDFRDRDILVVTSDSCYLSFMSWSNTLMQFISIQQYKISGANAKFDTKSLGSK 266
Query: 158 LAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISG 217
+ + S LIAV A +D + L ++ + + I + RI K I G
Sbjct: 267 IRISSCQRLIAVCAIKDNIMLLPVNTNRATRTTTTTIV----------SKRIDLK--IKG 314
Query: 218 TIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVGWNI--REHAISVLSCFFEA 275
I M F+++ + H L + N E+ ++ +N+ E++I +
Sbjct: 315 PIICMGFLASSSPDNNNHHLIYLQVSTN------TEIHMIEFNLYTNEYSIRKTHTLKDQ 368
Query: 276 GPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDES 335
+ + + +P F+ +L + RD H SC Y+ +NF L+ VD S
Sbjct: 369 QLVPYQFISIPNQPNLFFLVYDSSLILFN-RDLH--SC-YK--INFSTIYLDFDENVDRS 422
>gi|398407593|ref|XP_003855262.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
gi|339475146|gb|EGP90238.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
Length = 1218
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 80 SVCEQAVFGTIKDLAV--VPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFF 137
+VC+Q VFG ++ +A +P D LVV SDSG+++ L + + F
Sbjct: 61 TVCDQNVFGIVRGVAAFRIPGT-----------ATDQLVVSSDSGRVTMLTYDADKQNF- 108
Query: 138 PVAQVHLSNPGNS---RHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDII 190
+VHL G S R G LA DS G I +++ E ++ L+ + +II
Sbjct: 109 --KRVHLETYGKSGIRRTIPGHYLASDSRGRCIMLASVEKNKVVYMLNRHADGNII 162
>gi|255539681|ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
[Ricinus communis]
gi|223550020|gb|EEF51507.1| cleavage and polyadenylation specificity factor cpsf, putative
[Ricinus communis]
Length = 1461
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 21/153 (13%)
Query: 459 LVYTSPIQNIAPIL----DMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRT 514
L+ P+++ + L D S + + C G G+L I+R I E + T
Sbjct: 510 LINVGPLKDFSYGLRSNYDASATGIAKQSNYDLVCCSGHGKNGTLCILRQSIRPEMI--T 567
Query: 515 APIYQGITGTWTVRMK--------------VSDPYHSFLVLSFVEETRVLRVGLNFTDVT 560
G G WTV K +D YH++L++S T VL ++VT
Sbjct: 568 EVDLPGCRGIWTVYHKNARGHNVDLSKMAAAADEYHAYLIISMEARTMVLETADLLSEVT 627
Query: 561 DSVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
+SV + T+A G L ++Q+ + R+
Sbjct: 628 ESVDYFVQGRTIAAGNLFGRRRVIQVFERGARI 660
>gi|119496978|ref|XP_001265260.1| hypothetical protein NFIA_020710 [Neosartorya fischeri NRRL 181]
gi|119413422|gb|EAW23363.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 1186
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 177/432 (40%), Gaps = 87/432 (20%)
Query: 381 SWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDG---HKVHLSECLYKGPPCKALLWVE- 436
+WS+ D I C + G F + I G++G ++ HL + +L +
Sbjct: 319 NWSYNQRHDDI---YLCREDGRVFYLGI--GNEGELENQAHLGQLCCDVDAAFDILDIGH 373
Query: 437 --GRFLSAFVEMGDG-MVLKEENGRLVYTSPIQNIAPILDMSVVDY------HDEKRDQM 487
G L A GDG + +++ N +P+ D +V+ D RD++
Sbjct: 374 EGGDLLLAAGTTGDGGLFVQKARDEPRCVQKFINWSPVTDSVIVNSGQDSSSSDTARDRL 433
Query: 488 FACCGVA-PEGSLRIIRSG--------ISLEKLLRTAPIY---QGITGTWTVRMKVSDPY 535
F C + G++ +R G +SLE+L T I+ I G V + +SDP
Sbjct: 434 FVCSASSYGRGAIFELRHGLEAQIGLVVSLEELSSTRDIWTMSDDINGG--VYLLISDPV 491
Query: 536 HS---FLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRL 592
S +L F EE + D DS G TLA G + G+LVQI + A+ L
Sbjct: 492 SSILLYLSADFGEEMCAI-------DEADS-GLDFSTQTLAAGCTSSGVLVQITEKAILL 543
Query: 593 CMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVS 652
A+ + + F S+++ AV + +++++ VR+
Sbjct: 544 G----TANESTLRTRFE-----FGSDQSVAVAAVHSSASLIASA---------VRTRHEM 585
Query: 653 HYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFV-IG 711
H + + + Q LS I P + P P+S++ V+ +T + +G
Sbjct: 586 HLSLRNINISQDQLHLSEIGQPLRLPHE-----PVSILIE---------VLGTFTLIFVG 631
Query: 712 THRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLAD------QFYVL 765
T V + SF ++ +L+ S+ + N G +S I + + +V D ++ +L
Sbjct: 632 TGNGKVLMYSF--EDSAMLLSEVSVDVEN--GDDLSKAI-ESLAVVAIDTDGPSQKYTIL 686
Query: 766 AGLRNGMLLRFE 777
GLR+G+ FE
Sbjct: 687 CGLRSGIFAPFE 698
>gi|336470789|gb|EGO58950.1| hypothetical protein NEUTE1DRAFT_145059 [Neurospora tetrasperma
FGSC 2508]
gi|350291855|gb|EGZ73050.1| hypothetical protein NEUTE2DRAFT_156600 [Neurospora tetrasperma
FGSC 2509]
Length = 1158
Score = 43.5 bits (101), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 41/231 (17%)
Query: 465 IQNIAPILDMSVVDYHDEKRD------------QMFACCGVAPEGSLRIIRSGISLEKLL 512
++NI PI D +V+D + + D ++ GV +G+LR +RSG+ L+ +
Sbjct: 377 LENIGPITDFTVMDMGNRENDSQLGNEYSSGQARIVTASGVFKDGTLRSVRSGVGLQDIA 436
Query: 513 RTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDVC 570
+ Q ++++ + P LV SF+ +TR+ + + +V + G
Sbjct: 437 ILGEL-QHTRALFSLQ-SYNSPRVDTLVASFLTDTRIFKFDPHGEIEEVDNYYGMDLQHQ 494
Query: 571 TLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNM 630
TL + +G L+Q+ A T++ G+ ++ SW PE
Sbjct: 495 TLLATNLDNGQLLQVTTAAA-----TLLDAESGVTIA-----SWAPE---------GDRQ 535
Query: 631 IIVSTSNPCFLF--ILGVRSLSV---SHYEIYEMQHMRLQSELSCISI-PQ 675
II +++N +L + G +S+ + + + + + Q +++CI + PQ
Sbjct: 536 IINASANKHWLLLSVQGTTLVSINIDNDLTVVQEKDISEQDQIACIHVAPQ 586
>gi|336263557|ref|XP_003346558.1| hypothetical protein SMAC_04731 [Sordaria macrospora k-hell]
gi|380090453|emb|CCC11749.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1149
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 41/231 (17%)
Query: 465 IQNIAPILDMSVVDYHDEKRD------------QMFACCGVAPEGSLRIIRSGISLEKLL 512
++NI PI D +++D + + D ++ G+ +G+LR +RSG+ L+ +
Sbjct: 358 LENIGPITDFTIMDMGNRENDSQLGNEYSSGQARIVTASGIFKDGTLRSVRSGVGLQDIA 417
Query: 513 RTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDVC 570
+ Q ++++ S + LV SF+ +TR+ R + +V D G
Sbjct: 418 ILGEL-QHTRALFSLQSYNSSRADT-LVASFLTDTRIFRFDPHGEIEEVADYCGMDLQHQ 475
Query: 571 TLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNM 630
TL + +G L+Q+ A T++ G+ ++ SW PE
Sbjct: 476 TLLTTNLDNGQLLQVTTAAA-----TLLDAESGVTIA-----SWAPE---------GDRQ 516
Query: 631 IIVSTSNPCFLF--ILGVRSLSV---SHYEIYEMQHMRLQSELSCISI-PQ 675
II +++N +L + G +S+ + + + + + Q +++CI + PQ
Sbjct: 517 IINASANKHWLLLSVQGTTLVSINIDNDLTVVQEKDVSEQDQIACIHVAPQ 567
>gi|393905247|gb|EJD73911.1| CPSF A subunit region family protein [Loa loa]
Length = 1145
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+API DM+V+ + ++ Q+ C G +G++RIIR+GI +E+L +GI +T
Sbjct: 359 NLAPIRDMTVMRCNGQQ--QILTCSGAYKDGTIRIIRNGIGIEELASVE--LKGIKNMFT 414
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQI 585
+R + + +L+LSF +T VL + + T GF D TL G L ++Q+
Sbjct: 415 LRTR-DHEFDDYLILSFDSDTHVLLINGEELEDTQITGFVVDGATLWAGCLFQSTTILQV 473
Query: 586 HQNAVRL 592
V L
Sbjct: 474 THGEVIL 480
>gi|295674301|ref|XP_002797696.1| thermotolerance protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280346|gb|EEH35912.1| thermotolerance protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1298
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 24/196 (12%)
Query: 9 STAKSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIE 68
++ + S PS ++ P + L++ V+ G ++ +V +R +D+VF + I+
Sbjct: 30 TSGDATSKPSRATVPIT-----GVLSRTVIPGPMIQRVLPARIRHRDKHDIVFVGDDFIQ 84
Query: 69 LVIIGEDGIVQSVCEQAVFGT-IKDLAVVPWNKKFNAQNSQVMGKDL------------- 114
+ + G ++ + +A F T I D V+ N +V+G +L
Sbjct: 85 VKELVAGGHLEDIATKADFDTKILDAKVIGSNGVTALDAEKVLGAELGASASKLLDDSWH 144
Query: 115 ---LVVISDSGKLSFLAFCN--EMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAV 169
+V++ S +L FL + F + L + +S Q GR +A+D S +A+
Sbjct: 145 RQIIVLVLASKELLFLYGTEGPSGNPEFTFVRRPLPSDVSSLEQYGRYIAIDPSSRAMAI 204
Query: 170 SAYEDRLGLFSLSMSS 185
SA G+FSL + S
Sbjct: 205 SAAYKFFGVFSLKLPS 220
>gi|340513970|gb|EGR44242.1| predicted protein [Trichoderma reesei QM6a]
Length = 1325
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 12 KSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVI 71
K+ ++P +S P P L +++ VV V LRS T ND+ F E +++
Sbjct: 25 KASAAPQLASEPVQQPPACGILTHTIVESPVVRWVLPVRLRSSTHNDIAFIGEHFLQISQ 84
Query: 72 IGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDL 114
+G DG V V ++ FG F +N+ V+G L
Sbjct: 85 LGRDGQVHDVLRKSDFG-------------FRIRNAAVLGDSL 114
>gi|449661926|ref|XP_002167992.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Hydra magnipapillata]
Length = 1122
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 486 QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVS----DPYHSFLVL 541
+M C G G+L +++ I + + T G WTV K S + YHS+L+L
Sbjct: 463 EMVCCSGYGKNGTLTVLQRSIRPQVV--TTFELPGCVNMWTVCGKSSKESVENYHSYLIL 520
Query: 542 SFVEETRVLRVGLNFTDVTDSVGFRPDVCTL-ACGLVADGLLVQIHQNAVRLCMPTMVAH 600
S + T VL+ G T++ D+ GF T+ AC +++ ++Q+ ++ L T+ +
Sbjct: 521 SRDDSTMVLKTGAEITEL-DNSGFNVQQPTIFACNHLSNKYILQVCPQSIHLLEDTVQIN 579
Query: 601 S 601
S
Sbjct: 580 S 580
>gi|384493524|gb|EIE84015.1| hypothetical protein RO3G_08720 [Rhizopus delemar RA 99-880]
Length = 321
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 458 RLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPI 517
+++ + N API D+ ++ ++D AC G+ +GSL I+ G++ L +
Sbjct: 224 KIIVLQDLINRAPITDVQIMPEISGEQDAFIACSGMGKQGSLTIMTHGVATSTLACSKAQ 283
Query: 518 YQGITGTWTVRMKVSDPYHS 537
++GIT W++ S P +
Sbjct: 284 WKGITRLWSINDLSSSPQDT 303
>gi|327299238|ref|XP_003234312.1| hypothetical protein TERG_04903 [Trichophyton rubrum CBS 118892]
gi|326463206|gb|EGD88659.1| hypothetical protein TERG_04903 [Trichophyton rubrum CBS 118892]
Length = 1320
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 60/223 (26%)
Query: 465 IQNIAPILDMSVVDYH---------DEKR------DQMFACCGVAPE-GSLRIIRSGISL 508
+ N PILD +V+ D ++ D++F C GV P+ G++ +R GI
Sbjct: 456 VPNWGPILDTAVIKARRPTTSSLSKDTQQGMGLPFDRIFTCSGVGPDHGTISELRYGIEA 515
Query: 509 EKLLRTAPIYQG----ITGTWTVRMK--------VSDPYHS---FLVLSFVEETRVLRVG 553
+ L I G ITG W + + ++DP S F+ +S EE
Sbjct: 516 QIGLN---IEHGACSSITGVWGISVPKGEGTLCLLTDPMTSSLIFIPISGTEEA------ 566
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
F + G D TLA + DG+++Q+ ++R LS+ V
Sbjct: 567 --FAMDEERSGLDLDHPTLAASITPDGIVIQVTDASIR--------------LSHVV--- 607
Query: 614 WFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEI 656
F + SI+ G ++ TS P L ++ +R+ S E+
Sbjct: 608 -FQQRSSITWGDPNDRAVVAFTSGPLSLVVVALRNGSDVRVEL 649
>gi|85107301|ref|XP_962347.1| hypothetical protein NCU06605 [Neurospora crassa OR74A]
gi|28923951|gb|EAA33111.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1158
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 102/231 (44%), Gaps = 41/231 (17%)
Query: 465 IQNIAPILDMSVVDYHDEKRD------------QMFACCGVAPEGSLRIIRSGISLEKLL 512
++NI P+ D +V+D + + D ++ GV +G+LR +RSG+ L+ +
Sbjct: 377 LENIGPVTDFTVMDMGNRENDSQLGNEYSSGQARIVTASGVFKDGTLRSVRSGVGLQDIA 436
Query: 513 RTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN--FTDVTDSVGFRPDVC 570
+ Q ++++ + P LV SF+ +TR+ + + +V + G
Sbjct: 437 ILGEL-QHTRALFSLQ-SYNSPRVDTLVASFLTDTRIFKFDPHGEIEEVDNYYGMDLQHQ 494
Query: 571 TLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNM 630
TL + +G L+Q+ A T++ G+ ++ SW PE
Sbjct: 495 TLLATNLDNGQLLQVTTAAA-----TLLDAESGVTIA-----SWAPE---------GDRQ 535
Query: 631 IIVSTSNPCFLF--ILGVRSLSV---SHYEIYEMQHMRLQSELSCISI-PQ 675
II +++N +L + G +S+ + + + + + Q +++CI + PQ
Sbjct: 536 IINASANKHWLLLSVQGTTLVSINIDNDLTVVQEKDISEQDQIACIHVAPQ 586
>gi|302849059|ref|XP_002956060.1| hypothetical protein VOLCADRAFT_97017 [Volvox carteri f.
nagariensis]
gi|300258565|gb|EFJ42800.1| hypothetical protein VOLCADRAFT_97017 [Volvox carteri f.
nagariensis]
Length = 3333
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 32 YLAKCVLKGSVVLQVAHGHL----RSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVF 87
+L+K ++ VV V G+ + + V+ +++EL+ +G G SVC Q +
Sbjct: 5 WLSKTLVPSGVVEHVVCGNFVATCQPGHAQVVLLHAGSNLELLAVGASGAAASVCSQPLQ 64
Query: 88 G--TIKDLAVVPWNKKFNAQNSQVM---GKDLLVVISDSGKLSFLAFCNEMHRFFPVAQV 142
+ D+ V+P + + V D L++++ SG+++ L F + +RF V +V
Sbjct: 65 AGDAVVDMRVLPRAARLDTTAVAVRPCPDPDSLLLLTGSGRVTVLRFDEQCNRFVLVQEV 124
Query: 143 HLSNPGNSRHQLGRMLAVDSSGCL-IAVSAYEDRL 176
L+ PG R++A SG +A++A++DR+
Sbjct: 125 LLTGPGTQPRFQPRLMATSPSGRHGVAIAAFQDRI 159
>gi|358372153|dbj|GAA88758.1| thermotolerance protein [Aspergillus kawachii IFO 4308]
Length = 1283
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 29 NIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQAVFG 88
+ L+ ++ ++ + HLRS NDVVF E +++ ++ V + F
Sbjct: 40 KVGLLSHTLVSSPIIQWILPAHLRSKDQNDVVFVGERHLQIKEAVSGVHLEEVTTKNDFD 99
Query: 89 TIKDLAVV-------PWNK--KFNAQNS---------QVMGKDLLVVISDSGKLSFLAFC 130
+ A V PW + K A NS Q + +LV+ S +L FL F
Sbjct: 100 SCIMAAKVINVSTELPWEEEMKLAASNSTLRASSDLRQDLPPQILVLSLASKELVFLYFS 159
Query: 131 NEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSL 181
N +F + L N ++ + GR +AV+ +AVSA D G+F L
Sbjct: 160 NASGQFV-YHRRPLPNDVSAFERFGRNIAVEPRSRAVAVSASSDYFGIFVL 209
>gi|297816810|ref|XP_002876288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322126|gb|EFH52547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 42.7 bits (99), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 830 TRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVEC 889
+R +G+ P L +S + M+ LS RPWL R T +S++ A P S +C
Sbjct: 105 SRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQC 164
Query: 890 PKGILFVAENSLNL 903
+G++ VA ++L +
Sbjct: 165 AEGVVSVAGDALRI 178
>gi|448114553|ref|XP_004202604.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
gi|359383472|emb|CCE79388.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
Length = 1248
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G + +C VF I+ L +K SQ KD LV+ SDSGKL+ L + +R
Sbjct: 56 GKLDKICVHNVFSVIQSL------EKIRLMGSQ---KDYLVITSDSGKLAILQYDTGRNR 106
Query: 136 FFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYE 173
F + Q S G R+ G L D I + A E
Sbjct: 107 FITMFQEPHSKTGFRRNTPGAYLLTDPQNRAILIGALE 144
>gi|354547430|emb|CCE44165.1| hypothetical protein CPAR2_503890 [Candida parapsilosis]
Length = 1171
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 113 DLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAY 172
D+LV+ +DSG LS + + + + F + Q+ + G SR G LAVDS I V A
Sbjct: 82 DVLVLTTDSGNLSIIQYEPKRNEFVSICQMPMCKNGWSRSYPGEFLAVDSQSRCILVGAV 141
Query: 173 EDRLGLFSLSMS 184
E + L+ + S
Sbjct: 142 EKKKFLYKVEHS 153
>gi|312076588|ref|XP_003140928.1| xeroderma Pigmentosum Group E Complementing protein [Loa loa]
Length = 516
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWT 526
N+API DM+V+ + ++ Q+ C G +G++RIIR+GI +E+L +GI +T
Sbjct: 359 NLAPIRDMTVMRCNGQQ--QILTCSGAYKDGTIRIIRNGIGIEELASVE--LKGIKNMFT 414
Query: 527 VRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG 575
+R + + +L+LSF +T VL + + T GF D TL G
Sbjct: 415 LRTR-DHEFDDYLILSFDSDTHVLLINGEELEDTQITGFVVDGATLWAG 462
>gi|357162146|ref|XP_003579318.1| PREDICTED: probable cleavage and polyadenylation specificity factor
subunit 1-like [Brachypodium distachyon]
Length = 1442
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 486 QMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVS-------DPYHSF 538
++ C G G+L +++ I + L T G WTV K S + YH++
Sbjct: 544 ELVCCSGHGKNGALSVLQQSIRPD--LITEVELPSCRGIWTVYYKSSRGHTTEDNEYHAY 601
Query: 539 LVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG-LVADGLLVQIHQNAVRL 592
L++S T VL G + +VT++V + T+ G L ++Q++ R+
Sbjct: 602 LIISLESRTMVLETGDDLGEVTETVDYYVQGATITAGNLFGRRRVIQVYATGARV 656
>gi|347838030|emb|CCD52602.1| similar to DDB1B (Damaged DNA Binding protein 1 B); damaged DNA
binding / protein binding [Botryotinia fuckeliana]
Length = 1157
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 35/223 (15%)
Query: 467 NIAPILDMSVVDY-----------HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTA 515
NIAPILD +V+D + + ++ G GSLR +RSG+ L+ A
Sbjct: 376 NIAPILDFTVMDMGGREGETQLNEYSSGQARLVTGSGGFEGGSLRSVRSGVGLDDTAILA 435
Query: 516 PIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGL--NFTDVTDSVGFRPDVCTLA 573
+ +GI + + + P + LV+SF ETR + + +V TL
Sbjct: 436 EM-EGIRKVFALHSGPTLP-NDTLVVSFSTETRFFKFDTQGDIEEVETVKNLSSTSETLL 493
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIV 633
+ +G ++Q+ Q+ V ++ S G W P + I A + I+
Sbjct: 494 TYNLDEGCILQVTQHEV-----SIYGKSPG--------HRWQPPNGQIITAASGNQNYIL 540
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRL-QSELSCISIPQ 675
+SN LF L ++ + E+ L +++CI +PQ
Sbjct: 541 LSSNGRTLFTLSIQQ------NLAEVAFQELGDDQVACIHVPQ 577
>gi|393243160|gb|EJD50676.1| hypothetical protein AURDEDRAFT_112250 [Auricularia delicata
TFB-10046 SS5]
Length = 1140
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 467 NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL 511
N+API+D +VD +D + Q+ C G GSLR+++ LE+L
Sbjct: 374 NLAPIVDAVIVDINDSNQPQVVTCSGGYNTGSLRVVQKSAELEQL 418
>gi|154303693|ref|XP_001552253.1| hypothetical protein BC1G_08731 [Botryotinia fuckeliana B05.10]
Length = 1087
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 35/223 (15%)
Query: 467 NIAPILDMSVVDY-----------HDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTA 515
NIAPILD +V+D + + ++ G GSLR +RSG+ L+ A
Sbjct: 306 NIAPILDFTVMDMGGREGETQLNEYSSGQARLVTGSGGFEGGSLRSVRSGVGLDDTAILA 365
Query: 516 PIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGL--NFTDVTDSVGFRPDVCTLA 573
+ +GI + + + P + LV+SF ETR + + +V TL
Sbjct: 366 EM-EGIRKVFALHSGPTLP-NDTLVVSFSTETRFFKFDTQGDIEEVETVKNLSSTSETLL 423
Query: 574 CGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIV 633
+ +G ++Q+ Q+ V ++ S G W P + I A + I+
Sbjct: 424 TYNLDEGCILQVTQHEV-----SIYGKSPG--------HRWQPPNGQIITAASGNQNYIL 470
Query: 634 STSNPCFLFILGVRSLSVSHYEIYEMQHMRL-QSELSCISIPQ 675
+SN LF L ++ + E+ L +++CI +PQ
Sbjct: 471 LSSNGRTLFTLSIQQ------NLAEVAFQELGDDQVACIHVPQ 507
>gi|146322418|ref|XP_001481701.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
gi|129557007|gb|EBA27334.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
Length = 1285
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 171/432 (39%), Gaps = 87/432 (20%)
Query: 381 SWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDG---HKVHLSECLYKGPPCKALLWVE- 436
+WS+ D I C + G F + I G++G ++ HL + +L +
Sbjct: 353 NWSYNQRHDDI---YLCREDGRVFYLGI--GNEGELENQAHLGQLCCDVDAAFDILDIGH 407
Query: 437 --GRFLSAFVEMGDGMVLKEEN-------GRLVYTSPIQNIAPILDMSVVDYHDEKRDQM 487
G L A GDG + ++ + + SP+ + + D RD++
Sbjct: 408 EGGDLLLAAGTTGDGGLFVQKARDQPRCVQKFINWSPVTDSVIVSSGQDSSSSDTARDRL 467
Query: 488 FACCGVA-PEGSLRIIRSG--------ISLEKLLRTAPIY---QGITGTWTVRMKVSDPY 535
F C + G++ +R G +SLE L T I+ I G V + +SDP
Sbjct: 468 FVCSASSYGRGAIFELRHGLEAQIGLVVSLEDLSSTRDIWTMSDDINGG--VYLLISDPV 525
Query: 536 HS---FLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRL 592
S +L F EE + D DS G TLA G + G+LVQI + A+ L
Sbjct: 526 SSILLYLSADFGEEMCAI-------DEADS-GLDFSTQTLAAGCTSSGVLVQITEKAILL 577
Query: 593 CMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVS 652
T F S+++ AV + +++++ VR+
Sbjct: 578 GTTTKSTMRARFE---------FGSDQSVAVAAVHSSASLIASA---------VRTRHEM 619
Query: 653 HYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFV-IG 711
H + + + Q LS I P + P P+S++ V+ +T + +G
Sbjct: 620 HLSLKSINIGQDQLHLSEIGQPLRLPH-----EPVSILIE---------VLGTFTLIFVG 665
Query: 712 THRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLAD------QFYVL 765
T V + SF ++ +L+ SI + N G +S I + + +V D ++ +L
Sbjct: 666 TGNGKVLIYSF--EDSTMLLSEVSIDVEN--GDDLSKAI-ESLAVVAIDTDGPSQKYTIL 720
Query: 766 AGLRNGMLLRFE 777
GLR+G+ FE
Sbjct: 721 CGLRSGIFAPFE 732
>gi|14602539|gb|AAH09780.1| SF3B3 protein [Homo sapiens]
gi|325464197|gb|ADZ15869.1| splicing factor 3b, subunit 3, 130kDa [synthetic construct]
Length = 275
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 10/143 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTGG----- 73
Query: 107 SQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCL 166
KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 74 ----TKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRA 129
Query: 167 IAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 130 VMISAIEKQKLVYILNRDAAARL 152
>gi|149245793|ref|XP_001527373.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449767|gb|EDK44023.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1223
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G + ++ Q +FG + + V N +D LV SDSG LS L + + +
Sbjct: 56 GSLINIVNQNLFGVVNQVHKVQLNS----------NQDALVFTSDSGNLSVLTYDEHLKK 105
Query: 136 FFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMS 184
F + Q ++ G ++ G LAVD I V A E LF + +
Sbjct: 106 FKSILQQPIAKNGWNKTYPGEYLAVDPQNRCILVGAVEREKLLFRIETT 154
>gi|402083318|gb|EJT78336.1| hypothetical protein GGTG_03437 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1155
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 103/245 (42%), Gaps = 37/245 (15%)
Query: 395 VFCVDTGEFFMIEIAFGSDGHKVH-LSECLY-KGPPCKALLWVEGRFLSAFVEMGDGMVL 452
+ D G ++ + DG V + CL K L+ ++ +L GD +L
Sbjct: 298 ILADDYGGLHLLTLDVKEDGVTVKDIIVCLIGKASRANELVCLDSGYLFVGSHYGDSELL 357
Query: 453 -----KEENGR-LVYT-SPIQNIAPILDMSVVDYHDEKRD------------QMFACCGV 493
+E+ R LV T + +IAPILD +V+D + + D ++ G
Sbjct: 358 CLNLVREDTDRPLVETVQTLPSIAPILDFTVMDMGNREADNTVGNEYASGQARIVTGSGA 417
Query: 494 APEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVG 553
+GSLR +RSG+ L+ + A + G+ G + + S+ + LV SF+ ETRV
Sbjct: 418 HRDGSLRSVRSGVRLDDIGILADM-PGVRGLFPLE---SNGETNALVASFLTETRVFTFD 473
Query: 554 L--NFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVC 611
+ +V G V +L + D ++QI + + P GI +S
Sbjct: 474 AEGDIEEVEAFQGLDLSVRSLLVTNLGDDSILQITDHGASVIGP-----EAGITIS---- 524
Query: 612 TSWFP 616
SW P
Sbjct: 525 -SWEP 528
>gi|159130628|gb|EDP55741.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
Length = 1285
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 171/432 (39%), Gaps = 87/432 (20%)
Query: 381 SWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDG---HKVHLSECLYKGPPCKALLWVE- 436
+WS+ D I C + G F + I G++G ++ HL + +L +
Sbjct: 353 NWSYNQRHDDI---YLCREDGRVFYLGI--GNEGELENQAHLGQLCCDVDAAFDILDIGH 407
Query: 437 --GRFLSAFVEMGDGMVLKEEN-------GRLVYTSPIQNIAPILDMSVVDYHDEKRDQM 487
G L A GDG + ++ + + SP+ + + D RD++
Sbjct: 408 EGGDLLLAAGTTGDGGLFVQKARDQPRCVQKFINWSPVTDSVIVSSGQDSSSSDTARDRL 467
Query: 488 FACCGVA-PEGSLRIIRSG--------ISLEKLLRTAPIY---QGITGTWTVRMKVSDPY 535
F C + G++ +R G +SLE L T I+ I G V + +SDP
Sbjct: 468 FVCSASSYGRGAIFELRHGLEAQIGLVVSLEDLSSTRDIWTMSDDINGG--VYLLISDPV 525
Query: 536 HS---FLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRL 592
S +L F EE + D DS G TLA G + G+LVQI + A+ L
Sbjct: 526 SSILLYLSADFGEEMCAI-------DEADS-GLDFSTQTLAAGCTSSGVLVQITEKAILL 577
Query: 593 CMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVS 652
T F S+++ AV + +++++ VR+
Sbjct: 578 GTTTKSTMRARFE---------FGSDQSVAVAAVHSSASLIASA---------VRTRHEM 619
Query: 653 HYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFV-IG 711
H + + + Q LS I P + P P+S++ V+ +T + +G
Sbjct: 620 HLSLKSINIGQDQLHLSEIGQPLRLPH-----EPVSILIE---------VLGTFTLIFVG 665
Query: 712 THRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLAD------QFYVL 765
T V + SF ++ +L+ SI + N G +S I + + +V D ++ +L
Sbjct: 666 TGNGKVLIYSF--EDSTMLLSEVSIDVEN--GDDLSKAI-ESLAVVAIDTDGPSQKYTIL 720
Query: 766 AGLRNGMLLRFE 777
GLR+G+ FE
Sbjct: 721 CGLRSGIFAPFE 732
>gi|440793679|gb|ELR14857.1| CPSF A subunit region protein [Acanthamoeba castellanii str. Neff]
Length = 1477
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 21/145 (14%)
Query: 467 NIAPILDMSVVDYHD-----------EKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTA 515
N+ PI D ++ + D ++ ++ C G GSL +++ G+ E L+ +
Sbjct: 537 NVGPITDFAIGESFDPASVSMAEQEGQRSVEIVTCSGQGKNGSLCVLQHGVRPE-LVHAS 595
Query: 516 PIYQGITGTWTV------RMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVT-DSVGFRPD 568
G WT+ R YH++L+LS E+TRV+ G +++ + F
Sbjct: 596 ADLAGCKAFWTLYHRSEERQGEEAEYHAYLLLSEEEQTRVI-AGDGLDELSNEETDFNVA 654
Query: 569 VCTLACG-LVADGLLVQIHQNAVRL 592
T+ G L +VQ+HQ+ + L
Sbjct: 655 APTVDAGNLFEQTRIVQVHQHGLIL 679
>gi|301632350|ref|XP_002945249.1| PREDICTED: splicing factor 3B subunit 3-like [Xenopus (Silurana)
tropicalis]
Length = 196
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 830 TRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVEC 889
TR +G PV L + ++A+S R WL + + T +S++ +A+ S +C
Sbjct: 124 TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQC 183
Query: 890 PKGILFVAENSLN 902
P+GI+ ++ N+L
Sbjct: 184 PEGIVAISTNTLR 196
>gi|448528339|ref|XP_003869702.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis Co 90-125]
gi|380354055|emb|CCG23569.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis]
Length = 1170
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 113 DLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAY 172
D+LV+ SDSG LS + + + + F + Q+ + G SR G LAVDS I V A
Sbjct: 82 DVLVLTSDSGNLSIIQYEPKRNEFVSICQMPMCKNGWSRSYPGEFLAVDSQSRCILVGAV 141
Query: 173 EDRLGLFSL 181
E L+ +
Sbjct: 142 EKNKFLYKV 150
>gi|49247258|gb|AAT58665.1| thermotolerance protein [Aspergillus fumigatus]
Length = 1285
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 171/432 (39%), Gaps = 87/432 (20%)
Query: 381 SWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDG---HKVHLSECLYKGPPCKALLWVE- 436
+WS+ D I C + G F + I G++G ++ HL + +L +
Sbjct: 353 NWSYNQRHDDI---YLCREDGRVFYLGI--GNEGELENQAHLGQLCCDVDAAFDILDIGH 407
Query: 437 --GRFLSAFVEMGDGMVLKEEN-------GRLVYTSPIQNIAPILDMSVVDYHDEKRDQM 487
G L A GDG + ++ + + SP+ + + D RD++
Sbjct: 408 EGGDLLLAAGTTGDGGLFVQKARDQPRCVQKFINWSPVTDSVIVSSGQDSSSSDTARDRL 467
Query: 488 FACCGVA-PEGSLRIIRSG--------ISLEKLLRTAPIY---QGITGTWTVRMKVSDPY 535
F C + G++ +R G +SLE L T I+ I G V + +SDP
Sbjct: 468 FVCSASSYGRGAIFELRHGLEAQIGLVVSLEDLSSTRDIWTMSDDINGG--VYLLISDPV 525
Query: 536 HS---FLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRL 592
S +L F EE + D DS G TLA G + G+LVQI + A+ L
Sbjct: 526 SSILLYLSADFGEEMCAI-------DEADS-GLDFSTQTLAAGCTSSGVLVQITEKAILL 577
Query: 593 CMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVS 652
T F S+++ AV + +++++ VR+
Sbjct: 578 GTTTKSTMRARFE---------FGSDQSVAVAAVHSSASLIASA---------VRTRHEM 619
Query: 653 HYEIYEMQHMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPALPAGVIIGYTFV-IG 711
H + + + Q LS I P + P P+S++ V+ +T + +G
Sbjct: 620 HLSLKSINIGQDQLHLSEIGQPLRLPH-----EPVSILIE---------VLGTFTLIFVG 665
Query: 712 THRPSVEVLSFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLAD------QFYVL 765
T V + SF ++ +L+ SI + N G +S I + + +V D ++ +L
Sbjct: 666 TGNGKVLIYSF--EDSTMLLSEVSIDVEN--GDDLSKAI-ESLAVVAIDTDGPSQKYTIL 720
Query: 766 AGLRNGMLLRFE 777
GLR+G+ FE
Sbjct: 721 CGLRSGIFAPFE 732
>gi|384490729|gb|EIE81951.1| hypothetical protein RO3G_06656 [Rhizopus delemar RA 99-880]
Length = 967
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 468 IAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTV 527
+ PI+D + DY+ + + M C GV + S+RI+ +GI K + A + + WT+
Sbjct: 356 LGPIVDFCLYDYNKQGKQTMACCAGVEKDASIRIVENGIGFSK--KYALDFPLVYAMWTL 413
Query: 528 RM 529
+
Sbjct: 414 SL 415
>gi|119572188|gb|EAW51803.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_a [Homo sapiens]
Length = 265
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 10/143 (6%)
Query: 48 HGHLRSPTSNDVVFGKETSIELVIIGED-GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQN 106
HG+ ++V + +EL+ + G V ++ VFG I+ L
Sbjct: 19 HGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTGG----- 73
Query: 107 SQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCL 166
KD +VV SDSG++ L + + F + Q G R G+ LAVD G
Sbjct: 74 ----TKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRA 129
Query: 167 IAVSAYEDRLGLFSLSMSSGSDI 189
+ +SA E + ++ L+ + + +
Sbjct: 130 VMISAIEKQKLVYILNRDAAARL 152
>gi|408391284|gb|EKJ70664.1| hypothetical protein FPSE_09174 [Fusarium pseudograminearum CS3096]
Length = 1333
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 120/296 (40%), Gaps = 42/296 (14%)
Query: 13 SRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVII 72
S S P ++S + L++ +++ VV V LRS ++ND+ F + +++ +
Sbjct: 27 SSSVPKTASDQHTEKPACGILSRTIIESPVVHWVLPVLLRSHSNNDLAFIGDRFVQISEL 86
Query: 73 GEDGIVQSVCEQAVFGT-IKDLAVV------------PWNKK--------------FNAQ 105
EDG V V +A FGT I++ AV+ P + K + A
Sbjct: 87 REDGQVHEVIRKADFGTRIRNAAVLGAVPGAGTKGARPGSIKTEDTDVAMQDDSIMYEAD 146
Query: 106 NSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGC 165
+ LLV++ ++G FL + +P N + LG LA+D S
Sbjct: 147 GHHTLPPQLLVLMLETGDAVFLFIRQRLDGTLEFVTTKHESPRNLQF-LGYHLAIDPSFR 205
Query: 166 LIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMCFI 225
+A + + ++ L S + + + + S V T R G I M F+
Sbjct: 206 YLAAGSAQGAFIIYEL--ESLTTMNSQFRHHGSFKPVKTIRVRTTH-----GVIHKMEFL 258
Query: 226 STDPRQPSKEHNPILAIILN---RRGALLNELLLVGWNIREHAISVLSCFFEAGPL 278
PR H +L I++ R+ A ++ +++ W + + +VL E G L
Sbjct: 259 H--PRPEDDYHIILLLIVIQREVRKQAHVSRMVVYDWELGDELSTVLRS--EKGTL 310
>gi|302658215|ref|XP_003020814.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
gi|291184679|gb|EFE40196.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
Length = 1092
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 102/259 (39%), Gaps = 60/259 (23%)
Query: 447 GDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYH---------DEKR------DQMFACC 491
G G+ +++ + N PILD +V+ D ++ D++F C
Sbjct: 210 GGGLFIEDARKPPRCIQRVPNWGPILDTAVIKARRPTPNPLSRDTQQGMGLPFDRIFTCS 269
Query: 492 GVAPE-GSLRIIRSGISLEKLLRTAPIYQG----ITGTWTVRMK--------VSDPYHS- 537
GV P+ G++ +R GI + L I G ITG W + + ++DP S
Sbjct: 270 GVGPDHGTISELRYGIEAQIGLN---IEHGACSSITGVWGIPVPRGEGTLCLLTDPMTSS 326
Query: 538 --FLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMP 595
F+ +S EE F + G D TLA + DG++VQ+ ++R
Sbjct: 327 LIFIPISGTEEA--------FAMDEERSGLDLDHPTLAASITPDGIVVQVTDASIR---- 374
Query: 596 TMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYE 655
LS+ V F + SI+ ++ TS P L ++ +RS S E
Sbjct: 375 ----------LSHVV----FQQRSSITWDDPNDRAVVAFTSGPLSLVVVAIRSGSDVRVE 420
Query: 656 IYEMQHMRLQSELSCISIP 674
+ + + + I +P
Sbjct: 421 LRSVSSDENGCKCTLIGLP 439
>gi|119572189|gb|EAW51804.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_b [Homo sapiens]
Length = 635
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 830 TRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVEC 889
TR +G PV L + ++A+S R WL + + T +S++ A+ S +C
Sbjct: 109 TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQC 168
Query: 890 PKGILFVAENSLNL 903
P+GI+ ++ N+L +
Sbjct: 169 PEGIVAISTNTLRI 182
>gi|149038189|gb|EDL92549.1| splicing factor 3b, subunit 3 (predicted) [Rattus norvegicus]
Length = 650
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 830 TRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVEC 889
TR +G PV L + ++A+S R WL + + T +S++ A+ S +C
Sbjct: 124 TRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQC 183
Query: 890 PKGILFVAENSLNL 903
P+GI+ ++ N+L +
Sbjct: 184 PEGIVAISTNTLRI 197
>gi|322712455|gb|EFZ04028.1| thermotolerance protein [Metarhizium anisopliae ARSEF 23]
Length = 1340
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 116/264 (43%), Gaps = 40/264 (15%)
Query: 12 KSRSSPSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVI 71
K+ ++P S++ P + L++ +++ VV ++ LRS T ND+ F + +++
Sbjct: 25 KASTTPKSAARAHPEPPSCGILSRTIVESPVVHRILPVRLRSETHNDIAFVGDHFVQISE 84
Query: 72 IGEDGIVQSVCEQAVFGT-IKDLAVVPWNKK-----------FNAQNSQVMGKD------ 113
+ DG V V ++ FG+ I+ AV+ + + +++ ++ +D
Sbjct: 85 LRRDGQVHEVVRKSDFGSRIRGAAVIGDSLQHGLDDDDPADMVKSEDQDILMRDSLDTGL 144
Query: 114 ---------LLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSG 164
LLV+I +SG F +P N + LG ++VD S
Sbjct: 145 DSRHRLPPQLLVLILESGDTMFTFLRERQDSTLEFVFNKRESPKNLPY-LGYHISVDPSS 203
Query: 165 CLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSAS-RIAQKNSISGTIWSMC 223
+A ++ + L ++ +G ++++ Y + D S RI +I G I +
Sbjct: 204 RYMAAASPDGVLVIYEFESMAG---LNQQ--YRQQGFFDPVKSIRI---RAIQGVIHKLE 255
Query: 224 FISTDPRQPSKEHNPILAIILNRR 247
F+ PR P +++ IL +I+ RR
Sbjct: 256 FLY--PR-PEDDYHIILLLIVTRR 276
>gi|407044064|gb|EKE42344.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
Length = 1145
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 64 ETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGK 123
+T+IEL I E+ V + +++VF I+ + + + KD +++ SDSG
Sbjct: 36 QTTIELYRINENDQVSLILQESVFCMIRSMCKIRIGSE---------AKDYILIGSDSGS 86
Query: 124 LSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSM 183
++ L + +E ++ P+ G R G + D G + A E + ++ +
Sbjct: 87 ITLLGYSSEQNKLIPIYNEIFGKSGIRRVVPGEYICSDPMGRAAMIGAIEKQKLVYIFNR 146
Query: 184 SSGSDI 189
S I
Sbjct: 147 DSNGKI 152
>gi|213407660|ref|XP_002174601.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces japonicus
yFS275]
gi|212002648|gb|EEB08308.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces japonicus
yFS275]
Length = 1078
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 25/196 (12%)
Query: 458 RLVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKL-LRTAP 516
L+ N+API D + H M ACC EGSLR ++SGI + + P
Sbjct: 350 ELLEVQSFDNLAPISDFCID--HGNGGSFMVACCNAYNEGSLREMKSGIDISDYGVIEMP 407
Query: 517 IYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNF-TDVTDSVGFRPDVCTLACG 575
+ ++V+++ S +L + + ET V + + D+ DS+ T+ G
Sbjct: 408 ---NVCSLYSVQLQSS--VTKYLFVGSISETSVFEISQSGEMDLVDSLCLEEP--TIFVG 460
Query: 576 LVAD-GLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVS 634
+D L + +++V L G LSY WF + +I+ AV N + +S
Sbjct: 461 ATSDSSCLYHVARSSVCLF--------DGKQLSY-----WFADGGAITCAAVYDNAVCLS 507
Query: 635 TSNPCFLFILGVRSLS 650
+N +F+ ++ +S
Sbjct: 508 MTNNQIVFLHKLQVVS 523
>gi|442629265|ref|NP_001261223.1| CG13900, isoform C [Drosophila melanogaster]
gi|440215087|gb|AGB93918.1| CG13900, isoform C [Drosophila melanogaster]
Length = 469
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 459 LVYTSPIQNIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIY 518
LV + + API+ V D +E Q++ CG P +LR++R G+ + ++ + +
Sbjct: 395 LVLVDELPSFAPIITSQVADLANEDTPQLYVLCGRGPRSTLRVLRHGLEVSEMA-VSELP 453
Query: 519 QGITGTWTVRMK 530
WTV+ +
Sbjct: 454 GNPNAVWTVKKR 465
>gi|448111975|ref|XP_004201977.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
gi|359464966|emb|CCE88671.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
Length = 1249
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 70/175 (40%), Gaps = 30/175 (17%)
Query: 76 GIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHR 135
G + +C VF I+ L +K SQ KD LVV SDSGKL+ L + +R
Sbjct: 56 GKLDKICVHNVFSVIQSL------EKVRLTGSQ---KDYLVVTSDSGKLAILQYDTGRNR 106
Query: 136 FFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKIC 195
V Q S G R+ G L D I + A E ++ + + +I
Sbjct: 107 LVTVFQEPHSKTGFRRNTPGPYLLTDPQNRAILIGALERNKLIYKVHSDDKGGM---QIS 163
Query: 196 YPSESEVDTSASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGAL 250
P ES++ +++I+ +MC + T NP+ I GAL
Sbjct: 164 SPLESQI---------RHTIT---LAMCALDTG------YENPVFVAIEAEYGAL 200
>gi|428170663|gb|EKX39586.1| hypothetical protein GUITHDRAFT_143370 [Guillardia theta CCMP2712]
Length = 1162
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 20/155 (12%)
Query: 457 GRLVYTSPIQ-NIAPILDMSVVDYHDEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTA 515
G V SP + ++ I D VD+ + Q+ CG + LR+ RSG+ + K++
Sbjct: 400 GVEVMCSPFEESLGSIKDAIAVDFLGDGEMQLLLACGEGSDSCLRLCRSGLEVSKIIEEG 459
Query: 516 PIYQGITGTWTVR---------------MKVSDPYHSFLVLSF--VEETRVLRV-GLNFT 557
P + + +R ++ + S LV SF + +T+VL + G F
Sbjct: 460 PEMPECSDIFALRGLHILHVQPHDNGSNIQRLRAFDSHLVFSFASINQTKVLELDGHEFV 519
Query: 558 DVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRL 592
VT G D T+ + G LVQ+ + +RL
Sbjct: 520 PVT-LPGLCEDANTVFITSLPHGHLVQVTEMEIRL 553
>gi|451823243|ref|YP_007459517.1| ATP-dependent RNA helicase RhlE [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
gi|451776043|gb|AGF47084.1| ATP-dependent RNA helicase RhlE [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
Length = 458
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 146 NPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTS 205
NP + H++GR ++ G I++ +YE+ L ++ +GS I K+ PS S D S
Sbjct: 346 NPEDYVHRIGRTGRANNKGSAISLCSYEEETCLLNIEKFTGSKIPRLKLNMPSFSNYDDS 405
Query: 206 ASRIAQKNSISGTIWSMCFISTDPRQPSKEHNPILAIILNRRGALLNELLLVG 258
+ + K+SI I + +P++ SK + A NRR +LL G
Sbjct: 406 FDKNSLKSSILLDIDPLL----EPKRVSKNRVVLPANYKNRRNEKKIAILLGG 454
>gi|307107849|gb|EFN56091.1| hypothetical protein CHLNCDRAFT_145620 [Chlorella variabilis]
Length = 1626
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 10/138 (7%)
Query: 465 IQNIAPILDMSVVDYHDEKRDQ-----MFACCGVAPEGSLRIIRSGIS----LEKLLRTA 515
+ NI P+ D +V + + + C G G+L ++R + E +
Sbjct: 644 LANIGPLRDFAVAEPAAGAGGEAVPPALVGCSGEGKGGTLTVLRRSVVPDVITEHRGAAS 703
Query: 516 PIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACG 575
G +H++L+LSF T+VL G +VT+SV F D TLA G
Sbjct: 704 ASGGGSGQAAGEAAGQEGGHHAYLLLSFQGATKVLATGEELREVTESVEFAVDTPTLAAG 763
Query: 576 LVADG-LLVQIHQNAVRL 592
V G + Q +RL
Sbjct: 764 SVCCGRRIAQAFPQGLRL 781
>gi|313683655|ref|YP_004061393.1| hypothetical protein Sulku_2534 [Sulfuricurvum kujiense DSM 16994]
gi|313156515|gb|ADR35193.1| hypothetical protein Sulku_2534 [Sulfuricurvum kujiense DSM 16994]
Length = 1080
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 90 IKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGKLSFLAFCNEMHRFFPVAQVHLSNPGN 149
+K V P K FNA+ V G D+ V S GK+ +L + +E+ + FP + S P N
Sbjct: 294 LKKGDVFPMKKVFNAETLSVNGVDVSVYRSQEGKIDWLTYIDEIQKAFPSDENKTSEPWN 353
>gi|302495743|ref|XP_003009885.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
gi|291173407|gb|EFE29240.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
Length = 1118
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 102/259 (39%), Gaps = 60/259 (23%)
Query: 447 GDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYH---------DEKR------DQMFACC 491
G G+ +++ + N PILD +V+ D ++ D++F C
Sbjct: 236 GGGLFIEDARKPPRCIQRVPNWGPILDTAVIKARRPTTNPLSRDTQQGMGLPFDRIFTCS 295
Query: 492 GVAPE-GSLRIIRSGISLEKLLRTAPIYQG----ITGTWTVRMK--------VSDPYHS- 537
GV P+ G++ +R GI + L I G ITG W + + ++DP S
Sbjct: 296 GVGPDHGTISELRYGIEAQIGLN---IEHGACSSITGVWGIPVPRGEGTLCLLTDPMTSS 352
Query: 538 --FLVLSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMP 595
F+ +S EE F + G D TLA + DG+++Q+ ++R
Sbjct: 353 LIFIPISGTEEA--------FAMDEERSGLDLDHPTLAASITPDGIVIQVTDASIR---- 400
Query: 596 TMVAHSGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYE 655
LS+ V F + SI+ ++ TS P L ++ +R+ S E
Sbjct: 401 ----------LSHVV----FQQRSSITWDDPNDRAVVAFTSGPLSLVVVAIRNGSDVRVE 446
Query: 656 IYEMQHMRLQSELSCISIP 674
+ + + + I +P
Sbjct: 447 LRSVNSDENGCKCTLIGLP 465
>gi|358398986|gb|EHK48337.1| hypothetical protein TRIATDRAFT_316419 [Trichoderma atroviride IMI
206040]
Length = 1330
Score = 40.0 bits (92), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 3 VSEEVCSTAKSRSS--PSSSSAPASPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVV 60
V+E V A R+S P +S P P L++ + + VV V LRS T ND+
Sbjct: 14 VTETVNLQAALRASAAPQLASEPLPKPPVCGVLSQTLAESPVVRWVLPARLRSSTHNDIA 73
Query: 61 FGKETSIELVIIGEDGIVQSVCEQAVFG 88
F + +++ +G DG V V ++ FG
Sbjct: 74 FVGDHFVQISELGRDGQVHDVIRKSDFG 101
>gi|326474533|gb|EGD98542.1| hypothetical protein TESG_05913 [Trichophyton tonsurans CBS 112818]
gi|326478140|gb|EGE02150.1| thermotolerance protein [Trichophyton equinum CBS 127.97]
Length = 1320
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 60/241 (24%)
Query: 465 IQNIAPILDMSVVDYH---------DEKR------DQMFACCGVAPE-GSLRIIRSGISL 508
+ N PILD +V+ D ++ D++F C GV P+ G++ +R GI
Sbjct: 456 VPNWGPILDTAVIKARRPTTSPLSRDTQQGMGLPFDRIFTCSGVGPDHGTISELRYGIEA 515
Query: 509 EKLLRTAPIYQG----ITGTWTVRMK--------VSDPYHS---FLVLSFVEETRVLRVG 553
+ L I G ITG W + + ++DP S F+ +S EE
Sbjct: 516 QIGLN---IEHGACSSITGVWGIPVPKGEGTLCLLTDPMTSSLIFIPISGTEEA------ 566
Query: 554 LNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
F + G D TLA + DG+++Q+ ++R LS+ V
Sbjct: 567 --FAMDEERSGLDLDHPTLAASITLDGIVIQVTDASIR--------------LSHVV--- 607
Query: 614 WFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHMRLQSELSCISI 673
F + SI+ ++ TS P L ++ +R+ S E+ + + + I +
Sbjct: 608 -FQQRSSITWDDPNDRAVVAFTSGPLSLVVVAIRNGSDVRVELRSVSSDENGCKCTLIGL 666
Query: 674 P 674
P
Sbjct: 667 P 667
>gi|67472417|ref|XP_652013.1| splicing factor 3B subunit 3 [Entamoeba histolytica HM-1:IMSS]
gi|56468814|gb|EAL46625.1| splicing factor 3B subunit 3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449709507|gb|EMD48761.1| premRNA-splicing factor rse-1, putative [Entamoeba histolytica
KU27]
Length = 1145
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 64 ETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVISDSGK 123
+T+IEL I E+ V + +++VF I+ + + + KD +++ SDSG
Sbjct: 36 QTTIELYRINENDQVLLILQESVFCMIRSMCKIRVGSE---------AKDYILIGSDSGS 86
Query: 124 LSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCLIAVSAYEDRLGLFSLSM 183
++ L + +E ++ P+ G R G + D G + A E + ++ +
Sbjct: 87 ITLLGYSSEQNKLIPIYNEIFGKSGIRRVVPGEYICSDPMGRAAMIGAIEKQKLVYIFNR 146
Query: 184 SSGSDI 189
S I
Sbjct: 147 DSNGKI 152
>gi|238590334|ref|XP_002392284.1| hypothetical protein MPER_08162 [Moniliophthora perniciosa FA553]
gi|215458122|gb|EEB93214.1| hypothetical protein MPER_08162 [Moniliophthora perniciosa FA553]
Length = 276
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 822 PINLQLIATRR--IGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPST 879
PIN QL TR +G P+ L+ + + ++ALS R WL T ++ + +T + F+
Sbjct: 31 PINGQLTDTRTRFLGTRPIKLIRVQTQRNPAILALSSRSWLNYTHQNLMHFTPLIFESFD 90
Query: 880 HATPVCSVECPKGILFVAENSLNL 903
+A + P+G++ + ++L +
Sbjct: 91 YAWSFSAELSPEGLIGITGSTLRI 114
>gi|213408184|ref|XP_002174863.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212002910|gb|EEB08570.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 1066
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 115/302 (38%), Gaps = 40/302 (13%)
Query: 383 SWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGHKVHLSECLYKGPPCKALLWVEGRFLSA 442
++EP+ + D G+ F + + S + C P + L +L A
Sbjct: 284 AFEPDLSSTNVYLLAFDNGDIFRVRTSVVS----IDYLYCGKINNPATSPLVPLSPYLLA 339
Query: 443 FVEMGDGMVLKEENGRLVYTSPIQNIAPILDM-------SVVDYHDEKRDQMFACCGVAP 495
+ DG + + ++ I AP+ D V D + + G+
Sbjct: 340 TGDGCDGGFYEIQGDKVSLLYDIPCWAPVWDFVCLKARNGTVLNGDLTQSSIVTASGIGK 399
Query: 496 EGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLVLSFVEETRVLRVGLN 555
G+L +R G L +L + G +RM + S+ L++ +T++L+V +
Sbjct: 400 SGALYQLRYGKRLYPVLEATLTF----GATLMRMFQASEDESYCWLNYPWQTQILKVSQD 455
Query: 556 --FTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCMPTMVAHSGGIPLSYPVCTS 613
DVTD + F +V T L G+ +QI +NA+ C
Sbjct: 456 GAVEDVTDELHF--EVSTSLLVLCFSGIFIQITKNAIHRCC------------------- 494
Query: 614 WFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQHM-RLQSELSCIS 672
F E L A + ++S S+P LFI+ + S +I ++ L L+ ++
Sbjct: 495 -FGEQPFAILQAAQDSEFVISFSSPSSLFIVEQKEGGSSVGKILSLKRNDSLHCSLTDVT 553
Query: 673 IP 674
IP
Sbjct: 554 IP 555
>gi|374109159|gb|AEY98065.1| FAFR382Wp [Ashbya gossypii FDAG1]
Length = 1288
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 59 VVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVI 118
+ +T +EL + E+G ++ + + VFGTI L+ V + G+ +L+V+
Sbjct: 58 ICMATQTQVELYDV-EEGRLRRLFTRTVFGTITGLSSVVAD-----------GRSVLIVV 105
Query: 119 SDSGKLSFLAFCNEMHRFFPVAQVH--LSNPGNSRHQLGRMLAVDSSGCLIAVSAYE 173
DSGK+S L F E R A + LS G R ++VD G + +SA E
Sbjct: 106 GDSGKMSVLRFKYEGGRVRLEALFNEPLSRSGVRRLSPQAHVSVDPQGRCVLLSAME 162
>gi|302308830|ref|NP_985929.2| AFR382Wp [Ashbya gossypii ATCC 10895]
gi|442570014|sp|Q753D4.2|RSE1_ASHGO RecName: Full=Pre-mRNA-splicing factor RSE1
gi|299790815|gb|AAS53753.2| AFR382Wp [Ashbya gossypii ATCC 10895]
Length = 1288
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 59 VVFGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNKKFNAQNSQVMGKDLLVVI 118
+ +T +EL + E+G ++ + + VFGTI L+ V + G+ +L+V+
Sbjct: 58 ICMATQTQVELYDV-EEGRLRRLFTRTVFGTITGLSSVVAD-----------GRSVLIVV 105
Query: 119 SDSGKLSFLAFCNEMHRFFPVAQVH--LSNPGNSRHQLGRMLAVDSSGCLIAVSAYE 173
DSGK+S L F E R A + LS G R ++VD G + +SA E
Sbjct: 106 GDSGKMSVLRFKYEGGRVRLEALFNEPLSRSGVRRLSPQAHVSVDPQGRCVLLSAME 162
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,104,015,905
Number of Sequences: 23463169
Number of extensions: 596959992
Number of successful extensions: 1274531
Number of sequences better than 100.0: 783
Number of HSP's better than 100.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 365
Number of HSP's that attempted gapping in prelim test: 1271955
Number of HSP's gapped (non-prelim): 1849
length of query: 903
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 751
effective length of database: 8,792,793,679
effective search space: 6603388052929
effective search space used: 6603388052929
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 82 (36.2 bits)