BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044071
         (152 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O00182|LEG9_HUMAN Galectin-9 OS=Homo sapiens GN=LGALS9 PE=1 SV=2
          Length = 355

 Score = 33.1 bits (74), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 6/56 (10%)

Query: 84  GNNIEFVVKPTLHDGMNV------GVSWRLEWNKKHVPLGKGFSFHICQVYQGKVF 133
           GN+I F   P   DG  V        SW  E  K H+P  KG  F +C + Q   F
Sbjct: 55  GNDIAFHFNPRFEDGGYVVCNTRQNGSWGPEERKTHMPFQKGMPFDLCFLVQSSDF 110


>sp|Q6DKI2|LEG9C_HUMAN Galectin-9C OS=Homo sapiens GN=LGALS9C PE=2 SV=2
          Length = 356

 Score = 32.7 bits (73), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 12/91 (13%)

Query: 68  GKKQVLDFFTYLIRSLGNNIEFVVKPTLHDGMNVGV------SWRLEWNKKHVPLGKGFS 121
           G +  +DF T      GN+I F   P   DG  V        +W  E  K H+P  KG  
Sbjct: 42  GTRFAVDFQTGF---SGNDIAFHFNPRFEDGGYVVCNTRQKGTWGPEERKMHMPFQKGMP 98

Query: 122 FHICQVYQGKVF--IKNVEMFMEPLLHIGPF 150
           F +C + Q   F  + N  +F++   H  PF
Sbjct: 99  FDLCFLVQSSDFKVMVNGSLFVQ-YFHRVPF 128


>sp|Q3B8N2|LEG9B_HUMAN Galectin-9B OS=Homo sapiens GN=LGALS9B PE=2 SV=3
          Length = 356

 Score = 32.3 bits (72), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 12/91 (13%)

Query: 68  GKKQVLDFFTYLIRSLGNNIEFVVKPTLHDGMNVGVS------WRLEWNKKHVPLGKGFS 121
           G +  +DF T      GN+I F   P   DG  V  +      W  E  K H+P  KG  
Sbjct: 42  GTRFAVDFQTGF---SGNDIAFHFNPRFEDGGYVVCNTRQKGRWGPEERKMHMPFQKGMP 98

Query: 122 FHICQVYQGKVF--IKNVEMFMEPLLHIGPF 150
           F +C + Q   F  + N  +F++   H  PF
Sbjct: 99  FDLCFLVQSSDFKVMVNGSLFVQ-YFHRVPF 128


>sp|Q7VL35|HFLD_HAEDU High frequency lysogenization protein HflD homolog OS=Haemophilus
           ducreyi (strain 35000HP / ATCC 700724) GN=hflD PE=3 SV=1
          Length = 215

 Score = 32.0 bits (71), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%)

Query: 43  RELS----DIIGDE--CRCVCNFFSFLQPLQGKKQVLDFFTYLIRSLGNNIEFVVKPTLH 96
           R+LS    DI+ D+        +   + PL  K QVL    YL+R    +I+  V+ +L 
Sbjct: 117 RQLSLYDNDIMADQIIANLAAIYSEIISPLGSKIQVLGLQDYLVRP---DIQHKVRASLL 173

Query: 97  DGMNVGVSWR 106
            G+  G+ W+
Sbjct: 174 AGVRAGILWQ 183


>sp|Q8VWZ7|C76B6_CATRO Geraniol 8-hydroxylase OS=Catharanthus roseus GN=CYP76B6 PE=1 SV=1
          Length = 493

 Score = 31.2 bits (69), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 6   FVPFDAKNSSSGSGEDDHRAALETVLKLYSAIKSQSLRELSDIIGDECRCVCNFFSFLQP 65
            + +  KNS SG   D  RAA  T L L S +     ++L+D   D  +   +    +  
Sbjct: 153 LIAYCRKNSQSGEAVDVGRAAFRTSLNLLSNLIFS--KDLTDPYSDSAKEFKDLVWNIMV 210

Query: 66  LQGKKQVLDFFTYL 79
             GK  ++DFF  L
Sbjct: 211 EAGKPNLVDFFPLL 224


>sp|Q11092|FBX38_CAEEL F-box C protein 38 OS=Caenorhabditis elegans GN=fbxc-38 PE=4 SV=2
          Length = 272

 Score = 30.8 bits (68), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 5/83 (6%)

Query: 60  FSFLQPL--QGKKQVLDFFTYLIRSLGNNIEFVVKPTLHDGMNVGVSWRLEWNKKHVPLG 117
           F F  P+    K  V +  T+  +     + F         +N  V W   W K+   +G
Sbjct: 146 FDFEHPIVTSAKLLVFNIATFFDKIRNTRVHFTYSKRTLRNLNHRVDW---WTKEGKDIG 202

Query: 118 KGFSFHICQVYQGKVFIKNVEMF 140
             +SF +  V +GK  IK +  F
Sbjct: 203 THYSFDVGSVKEGKYNIKQINNF 225


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.142    0.441 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,286,114
Number of Sequences: 539616
Number of extensions: 2368646
Number of successful extensions: 5514
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 5512
Number of HSP's gapped (non-prelim): 8
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)