Query 044075
Match_columns 786
No_of_seqs 1129 out of 2681
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 11:13:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044075.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044075hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271 Notchless-like WD40 re 100.0 3.9E-43 8.5E-48 361.6 27.3 287 499-786 105-479 (480)
2 KOG0272 U4/U6 small nuclear ri 100.0 1.5E-40 3.2E-45 347.0 24.4 287 498-786 164-458 (459)
3 KOG0286 G-protein beta subunit 100.0 4.2E-38 9E-43 315.4 34.9 289 496-786 42-343 (343)
4 KOG0266 WD40 repeat-containing 100.0 2.3E-34 5E-39 327.7 41.5 287 499-786 148-452 (456)
5 KOG0265 U5 snRNP-specific prot 100.0 2.1E-35 4.6E-40 297.2 28.3 283 501-784 39-334 (338)
6 KOG0279 G protein beta subunit 100.0 1.1E-34 2.5E-39 289.4 32.6 283 500-786 6-311 (315)
7 KOG0271 Notchless-like WD40 re 100.0 2.8E-35 6E-40 303.6 25.1 244 499-745 147-479 (480)
8 cd00200 WD40 WD40 domain, foun 100.0 1.8E-33 3.9E-38 293.1 38.0 282 503-786 3-289 (289)
9 KOG0272 U4/U6 small nuclear ri 100.0 1.5E-35 3.3E-40 309.6 21.8 245 499-745 207-458 (459)
10 KOG0295 WD40 repeat-containing 100.0 5E-35 1.1E-39 300.8 25.0 288 498-786 97-404 (406)
11 KOG0284 Polyadenylation factor 100.0 7.4E-36 1.6E-40 310.5 18.4 276 508-786 95-378 (464)
12 KOG0285 Pleiotropic regulator 100.0 3.3E-34 7.2E-39 293.5 26.6 292 492-786 134-437 (460)
13 KOG0315 G-protein beta subunit 100.0 4.8E-33 1E-37 273.4 29.2 263 522-786 11-286 (311)
14 KOG0315 G-protein beta subunit 100.0 2.9E-32 6.3E-37 268.0 31.0 284 466-767 11-309 (311)
15 KOG0273 Beta-transducin family 100.0 1.8E-32 4E-37 289.7 31.5 274 509-786 235-521 (524)
16 KOG0293 WD40 repeat-containing 100.0 1.8E-33 3.8E-38 292.7 23.1 289 496-786 211-511 (519)
17 KOG0279 G protein beta subunit 100.0 2.3E-32 5.1E-37 272.9 28.9 270 468-747 31-313 (315)
18 KOG0273 Beta-transducin family 100.0 1.8E-32 3.8E-37 289.8 29.5 281 501-786 171-480 (524)
19 KOG0291 WD40-repeat-containing 100.0 1.6E-31 3.4E-36 295.4 35.5 286 498-786 296-610 (893)
20 KOG0263 Transcription initiati 100.0 1.7E-32 3.7E-37 306.5 27.8 271 504-776 373-703 (707)
21 KOG0645 WD40 repeat protein [G 100.0 2.5E-31 5.4E-36 264.5 32.5 281 499-786 4-309 (312)
22 KOG0318 WD40 repeat stress pro 100.0 5.6E-31 1.2E-35 281.5 36.1 288 497-786 178-600 (603)
23 KOG0282 mRNA splicing factor [ 100.0 3.9E-33 8.4E-38 296.1 19.0 286 499-786 204-503 (503)
24 PLN00181 protein SPA1-RELATED; 100.0 1.4E-30 2.9E-35 317.1 40.6 280 504-786 478-791 (793)
25 KOG0319 WD40-repeat-containing 100.0 1.4E-31 3E-36 296.1 27.5 288 498-786 312-617 (775)
26 KOG0318 WD40 repeat stress pro 100.0 5.7E-30 1.2E-34 273.8 36.2 285 500-786 138-558 (603)
27 KOG0263 Transcription initiati 100.0 1.6E-31 3.5E-36 298.8 23.5 235 551-786 378-647 (707)
28 KOG0296 Angio-associated migra 100.0 3.7E-30 8.1E-35 265.2 30.5 282 501-786 56-396 (399)
29 KOG0276 Vesicle coat complex C 100.0 6.7E-31 1.5E-35 285.0 26.0 280 503-784 7-295 (794)
30 KOG0306 WD40-repeat-containing 100.0 1.6E-30 3.4E-35 287.4 27.9 279 503-786 367-662 (888)
31 KOG0286 G-protein beta subunit 100.0 9.7E-30 2.1E-34 255.5 30.1 262 468-745 70-343 (343)
32 KOG0281 Beta-TrCP (transducin 100.0 1.2E-31 2.6E-36 273.4 15.9 263 508-786 196-475 (499)
33 KOG0291 WD40-repeat-containing 100.0 5.4E-29 1.2E-33 275.4 37.2 317 468-786 204-548 (893)
34 KOG0319 WD40-repeat-containing 100.0 2.9E-30 6.3E-35 285.6 27.1 306 477-786 75-575 (775)
35 KOG0643 Translation initiation 100.0 3.4E-29 7.3E-34 248.7 28.3 279 504-785 5-314 (327)
36 KOG0316 Conserved WD40 repeat- 100.0 3.4E-29 7.3E-34 244.6 26.2 279 500-785 8-296 (307)
37 KOG0278 Serine/threonine kinas 100.0 4.4E-30 9.4E-35 252.5 18.8 278 504-786 9-295 (334)
38 KOG0295 WD40 repeat-containing 100.0 2.9E-29 6.4E-34 258.4 23.8 246 499-746 140-405 (406)
39 KOG1407 WD40 repeat protein [F 100.0 1.5E-28 3.2E-33 243.5 26.8 280 503-785 14-308 (313)
40 KOG0292 Vesicle coat complex C 100.0 1E-28 2.3E-33 276.3 26.9 278 505-785 5-318 (1202)
41 KOG0284 Polyadenylation factor 100.0 8.6E-30 1.9E-34 265.4 15.9 251 495-747 124-380 (464)
42 KOG0285 Pleiotropic regulator 100.0 6E-29 1.3E-33 255.0 21.2 242 541-786 141-387 (460)
43 KOG0640 mRNA cleavage stimulat 100.0 1.7E-28 3.8E-33 247.5 23.4 285 500-786 103-424 (430)
44 KOG1446 Histone H3 (Lys4) meth 100.0 3.5E-27 7.6E-32 240.4 33.0 283 499-785 4-300 (311)
45 KOG0639 Transducin-like enhanc 100.0 1.7E-27 3.7E-32 252.8 31.7 276 507-786 417-702 (705)
46 KOG0288 WD40 repeat protein Ti 100.0 3.2E-29 7E-34 261.6 18.3 279 503-786 169-459 (459)
47 KOG0276 Vesicle coat complex C 100.0 8.2E-28 1.8E-32 261.2 28.8 274 456-743 15-295 (794)
48 KOG0266 WD40 repeat-containing 100.0 8.2E-28 1.8E-32 274.0 30.1 246 500-747 194-454 (456)
49 cd00200 WD40 WD40 domain, foun 100.0 6.9E-27 1.5E-31 243.4 34.6 243 501-745 43-289 (289)
50 KOG0275 Conserved WD40 repeat- 100.0 6.2E-29 1.3E-33 251.5 17.9 276 508-786 212-507 (508)
51 KOG0268 Sof1-like rRNA process 100.0 2.7E-29 5.8E-34 258.3 14.5 286 492-786 49-343 (433)
52 KOG0283 WD40 repeat-containing 100.0 9.4E-28 2E-32 270.9 26.6 244 501-747 258-576 (712)
53 KOG0772 Uncharacterized conser 100.0 2.6E-27 5.7E-32 252.6 27.7 289 497-785 155-484 (641)
54 KOG0306 WD40-repeat-containing 100.0 7.5E-27 1.6E-31 258.4 31.2 284 500-785 98-577 (888)
55 KOG0281 Beta-TrCP (transducin 100.0 1.3E-28 2.8E-33 251.4 14.3 244 498-752 226-482 (499)
56 KOG0313 Microtubule binding pr 100.0 5.3E-27 1.2E-31 242.9 26.2 273 507-786 103-416 (423)
57 KOG0310 Conserved WD40 repeat- 100.0 7.9E-27 1.7E-31 248.7 27.8 274 508-784 25-305 (487)
58 KOG0289 mRNA splicing factor [ 100.0 4.4E-27 9.6E-32 246.7 25.3 274 510-785 220-503 (506)
59 KOG0277 Peroxisomal targeting 100.0 4.1E-27 8.9E-32 232.5 22.7 274 513-786 12-307 (311)
60 KOG0296 Angio-associated migra 100.0 3.9E-26 8.5E-31 235.6 28.1 266 464-747 75-398 (399)
61 KOG0274 Cdc4 and related F-box 100.0 3.5E-26 7.6E-31 261.1 29.6 266 508-786 207-480 (537)
62 KOG0293 WD40 repeat-containing 99.9 1.1E-26 2.4E-31 242.1 22.4 260 486-748 246-514 (519)
63 KOG0282 mRNA splicing factor [ 99.9 1.3E-27 2.7E-32 254.3 15.1 245 541-786 204-460 (503)
64 KOG0645 WD40 repeat protein [G 99.9 1.7E-25 3.7E-30 223.0 29.3 262 479-747 30-311 (312)
65 PLN00181 protein SPA1-RELATED; 99.9 1.8E-25 3.9E-30 272.2 35.8 254 530-786 457-736 (793)
66 KOG0973 Histone transcription 99.9 7.5E-26 1.6E-30 261.1 29.1 277 508-785 12-352 (942)
67 KOG0265 U5 snRNP-specific prot 99.9 2.9E-26 6.2E-31 231.4 21.7 241 544-786 40-294 (338)
68 PTZ00420 coronin; Provisional 99.9 8.7E-25 1.9E-29 250.5 36.8 245 527-771 50-319 (568)
69 KOG0292 Vesicle coat complex C 99.9 6.2E-26 1.3E-30 254.2 26.4 244 501-747 43-321 (1202)
70 KOG0305 Anaphase promoting com 99.9 1.4E-25 3.1E-30 247.8 28.8 267 513-786 181-459 (484)
71 KOG0294 WD40 repeat-containing 99.9 2.5E-25 5.4E-30 225.9 27.3 269 492-767 26-306 (362)
72 KOG0278 Serine/threonine kinas 99.9 1.3E-26 2.8E-31 228.2 17.3 248 500-751 50-301 (334)
73 PTZ00421 coronin; Provisional 99.9 9E-25 2E-29 249.0 35.0 262 508-769 19-314 (493)
74 KOG0313 Microtubule binding pr 99.9 2.5E-25 5.4E-30 230.5 27.2 246 499-747 134-418 (423)
75 KOG0300 WD40 repeat-containing 99.9 6.6E-26 1.4E-30 229.2 21.8 286 498-786 137-474 (481)
76 KOG0308 Conserved WD40 repeat- 99.9 2.8E-26 6E-31 250.8 19.2 268 519-786 35-325 (735)
77 KOG0277 Peroxisomal targeting 99.9 5.5E-26 1.2E-30 224.5 18.4 237 509-746 60-308 (311)
78 KOG0647 mRNA export protein (c 99.9 9.3E-25 2E-29 220.6 26.3 267 508-776 26-311 (347)
79 KOG0641 WD40 repeat protein [G 99.9 1.3E-23 2.9E-28 204.0 33.0 287 498-785 22-346 (350)
80 KOG0316 Conserved WD40 repeat- 99.9 5.9E-25 1.3E-29 214.9 22.8 247 494-744 44-296 (307)
81 KOG1407 WD40 repeat protein [F 99.9 5.3E-25 1.2E-29 218.4 21.3 239 545-784 14-257 (313)
82 KOG2096 WD40 repeat protein [G 99.9 3.4E-24 7.5E-29 217.4 25.6 281 501-785 78-399 (420)
83 KOG0283 WD40 repeat-containing 99.9 1.2E-24 2.7E-29 245.7 24.6 240 544-786 259-574 (712)
84 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 5.7E-23 1.2E-27 219.4 35.6 262 521-786 1-277 (300)
85 KOG0275 Conserved WD40 repeat- 99.9 3.3E-25 7.1E-30 224.6 17.1 246 497-745 251-507 (508)
86 PTZ00421 coronin; Provisional 99.9 2.8E-23 6.1E-28 236.8 34.5 242 504-749 70-333 (493)
87 KOG0294 WD40 repeat-containing 99.9 7.8E-24 1.7E-28 215.1 26.2 256 524-786 4-279 (362)
88 KOG0288 WD40 repeat protein Ti 99.9 8.6E-25 1.9E-29 228.6 19.6 241 499-744 209-458 (459)
89 KOG1036 Mitotic spindle checkp 99.9 1.7E-23 3.6E-28 212.5 27.3 266 508-778 12-294 (323)
90 KOG0310 Conserved WD40 repeat- 99.9 3E-24 6.5E-29 229.1 22.6 241 504-747 63-309 (487)
91 KOG0650 WD40 repeat nucleolar 99.9 5.6E-24 1.2E-28 230.7 24.1 294 489-785 380-732 (733)
92 KOG0973 Histone transcription 99.9 7.8E-24 1.7E-28 244.6 26.7 249 500-750 60-358 (942)
93 KOG0299 U3 snoRNP-associated p 99.9 1.7E-23 3.8E-28 221.7 26.8 271 502-776 135-443 (479)
94 KOG0301 Phospholipase A2-activ 99.9 1.3E-23 2.8E-28 231.7 26.7 275 499-785 4-285 (745)
95 KOG0274 Cdc4 and related F-box 99.9 1.3E-23 2.9E-28 240.0 27.9 245 498-753 237-488 (537)
96 KOG1273 WD40 repeat protein [G 99.9 1.8E-23 3.9E-28 212.0 23.5 272 512-786 26-320 (405)
97 KOG1408 WD40 repeat protein [F 99.9 3.8E-23 8.3E-28 227.1 27.0 309 466-786 337-711 (1080)
98 KOG1539 WD repeat protein [Gen 99.9 3.5E-22 7.5E-27 224.2 34.5 305 467-785 216-645 (910)
99 KOG0641 WD40 repeat protein [G 99.9 2.3E-22 4.9E-27 195.4 28.6 242 502-747 82-349 (350)
100 KOG0305 Anaphase promoting com 99.9 1.3E-22 2.9E-27 224.3 26.7 237 509-749 217-463 (484)
101 PTZ00420 coronin; Provisional 99.9 7.1E-22 1.5E-26 226.6 32.9 216 569-786 50-291 (568)
102 KOG0643 Translation initiation 99.9 3.2E-22 6.9E-27 199.2 25.3 230 546-777 5-250 (327)
103 KOG2055 WD40 repeat protein [G 99.9 1.6E-22 3.5E-27 214.2 24.5 278 508-786 212-510 (514)
104 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 7.2E-21 1.6E-25 203.2 37.8 263 501-768 23-300 (300)
105 KOG1408 WD40 repeat protein [F 99.9 4.8E-23 1E-27 226.4 21.1 244 506-749 456-715 (1080)
106 KOG0639 Transducin-like enhanc 99.9 3.8E-22 8.3E-27 212.3 24.5 235 508-746 464-703 (705)
107 KOG0640 mRNA cleavage stimulat 99.9 6.9E-23 1.5E-27 207.1 17.7 209 544-753 105-341 (430)
108 KOG0289 mRNA splicing factor [ 99.9 4.2E-22 9E-27 209.5 24.2 245 501-746 253-505 (506)
109 KOG1446 Histone H3 (Lys4) meth 99.9 3.7E-21 7.9E-26 196.5 30.3 243 541-786 4-260 (311)
110 KOG0308 Conserved WD40 repeat- 99.9 1.6E-22 3.4E-27 221.6 21.6 319 459-786 31-391 (735)
111 KOG0269 WD40 repeat-containing 99.9 1E-22 2.2E-27 227.0 19.3 271 511-783 41-335 (839)
112 KOG1332 Vesicle coat complex C 99.9 1.4E-22 3E-27 199.6 17.4 240 547-786 7-284 (299)
113 KOG0301 Phospholipase A2-activ 99.9 9.9E-22 2.2E-26 216.9 25.8 262 462-748 22-289 (745)
114 KOG0264 Nucleosome remodeling 99.9 4.9E-22 1.1E-26 211.0 22.3 247 502-748 117-405 (422)
115 KOG0264 Nucleosome remodeling 99.9 6.5E-22 1.4E-26 210.1 21.8 239 548-786 121-402 (422)
116 KOG1332 Vesicle coat complex C 99.9 3E-22 6.6E-27 197.2 17.8 242 506-747 8-286 (299)
117 KOG0299 U3 snoRNP-associated p 99.9 2.3E-21 5E-26 205.7 24.7 228 506-737 199-445 (479)
118 KOG1274 WD40 repeat protein [G 99.9 6.8E-21 1.5E-25 216.2 29.8 271 506-783 10-295 (933)
119 KOG0268 Sof1-like rRNA process 99.9 1.9E-22 4.2E-27 208.0 15.4 261 468-749 82-347 (433)
120 KOG2106 Uncharacterized conser 99.9 7.9E-20 1.7E-24 195.3 35.6 284 498-786 234-624 (626)
121 KOG2445 Nuclear pore complex c 99.9 4E-21 8.7E-26 194.8 24.6 252 506-786 10-316 (361)
122 KOG4283 Transcription-coupled 99.9 6E-21 1.3E-25 192.1 25.2 277 505-785 39-362 (397)
123 KOG0267 Microtubule severing p 99.9 4E-23 8.7E-28 228.4 10.4 251 521-779 4-259 (825)
124 KOG1063 RNA polymerase II elon 99.9 1.2E-20 2.6E-25 208.3 29.6 281 505-786 263-646 (764)
125 KOG0772 Uncharacterized conser 99.9 1.8E-21 3.9E-26 208.3 22.3 234 510-744 215-484 (641)
126 KOG0267 Microtubule severing p 99.9 4.7E-23 1E-27 227.9 9.6 239 499-739 18-260 (825)
127 KOG1539 WD repeat protein [Gen 99.9 8.5E-20 1.8E-24 205.2 35.1 288 498-786 191-604 (910)
128 KOG0646 WD40 repeat protein [G 99.9 2E-21 4.3E-26 206.6 20.6 228 508-735 80-337 (476)
129 KOG0321 WD40 repeat-containing 99.9 2.1E-21 4.5E-26 212.5 21.1 272 514-786 54-389 (720)
130 KOG0300 WD40 repeat-containing 99.9 3.4E-21 7.5E-26 195.2 19.6 255 523-786 126-426 (481)
131 KOG0646 WD40 repeat protein [G 99.9 1.4E-20 3E-25 200.2 24.9 252 531-786 18-305 (476)
132 KOG2106 Uncharacterized conser 99.9 3.8E-19 8.2E-24 190.2 35.4 273 505-786 196-519 (626)
133 KOG1274 WD40 repeat protein [G 99.9 2.6E-20 5.7E-25 211.4 27.0 236 548-786 10-260 (933)
134 KOG2048 WD40 repeat protein [G 99.9 1.6E-19 3.5E-24 199.4 32.0 274 505-784 21-315 (691)
135 KOG0647 mRNA export protein (c 99.9 4E-20 8.7E-25 187.2 24.7 229 503-737 66-313 (347)
136 KOG0321 WD40 repeat-containing 99.9 4E-20 8.7E-25 202.5 22.4 281 460-749 59-393 (720)
137 KOG4328 WD40 protein [Function 99.8 9.1E-20 2E-24 193.4 23.3 289 496-785 173-492 (498)
138 KOG1063 RNA polymerase II elon 99.8 2E-19 4.3E-24 198.7 26.1 355 422-786 283-761 (764)
139 KOG0269 WD40 repeat-containing 99.8 1.3E-20 2.8E-25 210.3 16.1 233 511-745 89-338 (839)
140 KOG1036 Mitotic spindle checkp 99.8 3E-19 6.4E-24 181.8 23.9 230 550-786 12-260 (323)
141 KOG2919 Guanine nucleotide-bin 99.8 2.6E-19 5.7E-24 182.6 22.8 266 511-779 51-361 (406)
142 KOG1538 Uncharacterized conser 99.8 2.3E-19 5E-24 196.2 23.8 269 511-786 14-291 (1081)
143 KOG0302 Ribosome Assembly prot 99.8 1.3E-19 2.9E-24 188.0 20.7 239 506-745 148-436 (440)
144 KOG2096 WD40 repeat protein [G 99.8 5.7E-19 1.2E-23 179.7 23.6 238 545-785 80-357 (420)
145 KOG0307 Vesicle coat complex C 99.8 2.4E-20 5.2E-25 216.6 15.4 242 509-750 64-330 (1049)
146 KOG0270 WD40 repeat-containing 99.8 2.4E-19 5.3E-24 189.7 20.9 239 512-751 176-453 (463)
147 KOG0307 Vesicle coat complex C 99.8 3.2E-20 6.9E-25 215.6 14.2 272 513-785 10-324 (1049)
148 KOG1034 Transcriptional repres 99.8 8.4E-19 1.8E-23 179.4 22.2 285 498-786 26-381 (385)
149 KOG4283 Transcription-coupled 99.8 1.7E-18 3.8E-23 174.5 23.9 282 462-746 53-364 (397)
150 KOG2048 WD40 repeat protein [G 99.8 4.7E-18 1E-22 187.9 28.9 233 550-785 24-272 (691)
151 COG2319 FOG: WD40 repeat [Gene 99.8 7.3E-17 1.6E-21 176.2 38.2 281 504-786 60-357 (466)
152 COG2319 FOG: WD40 repeat [Gene 99.8 1.6E-16 3.5E-21 173.5 40.9 283 499-786 145-440 (466)
153 KOG0642 Cell-cycle nuclear pro 99.8 1.3E-19 2.8E-24 196.7 14.9 252 499-752 284-566 (577)
154 KOG4378 Nuclear protein COP1 [ 99.8 1E-18 2.2E-23 186.3 20.7 257 511-770 36-305 (673)
155 KOG4227 WD40 repeat protein [G 99.8 2.1E-18 4.6E-23 179.1 21.3 282 502-786 49-385 (609)
156 KOG0650 WD40 repeat nucleolar 99.8 1.1E-18 2.3E-23 190.0 19.8 241 543-785 392-677 (733)
157 KOG1273 WD40 repeat protein [G 99.8 3.3E-18 7.2E-23 174.0 21.5 266 466-748 36-323 (405)
158 KOG2055 WD40 repeat protein [G 99.8 3.9E-18 8.5E-23 181.2 22.4 244 501-747 249-512 (514)
159 KOG4328 WD40 protein [Function 99.8 1.9E-18 4.1E-23 183.5 19.5 251 536-786 171-448 (498)
160 KOG1445 Tumor-specific antigen 99.8 2.4E-17 5.3E-22 179.7 25.1 131 655-786 602-748 (1012)
161 KOG1009 Chromatin assembly com 99.8 3.2E-17 6.9E-22 172.1 23.8 293 467-783 28-367 (434)
162 KOG0322 G-protein beta subunit 99.8 3E-18 6.5E-23 170.8 15.3 281 500-786 5-321 (323)
163 KOG0270 WD40 repeat-containing 99.8 3.1E-17 6.7E-22 173.9 23.5 231 555-786 177-447 (463)
164 KOG1188 WD40 repeat protein [G 99.8 8.5E-18 1.8E-22 173.1 18.5 264 522-786 41-344 (376)
165 KOG0644 Uncharacterized conser 99.8 5.4E-19 1.2E-23 198.0 10.3 274 499-785 180-465 (1113)
166 KOG4378 Nuclear protein COP1 [ 99.8 1.3E-17 2.8E-22 177.9 20.0 217 511-729 81-305 (673)
167 KOG0302 Ribosome Assembly prot 99.8 2.5E-17 5.5E-22 171.2 21.2 235 547-781 147-432 (440)
168 KOG1240 Protein kinase contain 99.8 8.8E-17 1.9E-21 187.1 27.1 289 498-786 1037-1431(1431)
169 KOG0290 Conserved WD40 repeat- 99.8 1.3E-16 2.9E-21 161.0 23.8 235 507-744 94-362 (364)
170 PRK11028 6-phosphogluconolacto 99.8 6.8E-16 1.5E-20 169.1 31.5 260 525-786 6-302 (330)
171 KOG1587 Cytoplasmic dynein int 99.7 3.2E-16 6.8E-21 178.4 27.5 257 530-786 221-514 (555)
172 KOG1334 WD40 repeat protein [G 99.7 7.1E-18 1.5E-22 180.2 12.7 288 498-785 131-463 (559)
173 KOG1007 WD repeat protein TSSC 99.7 1.5E-16 3.2E-21 160.5 21.2 267 504-784 58-357 (370)
174 KOG2919 Guanine nucleotide-bin 99.7 2.7E-16 5.8E-21 160.8 22.2 232 554-786 52-325 (406)
175 KOG0642 Cell-cycle nuclear pro 99.7 5.3E-17 1.1E-21 176.6 17.1 249 463-717 304-573 (577)
176 PRK11028 6-phosphogluconolacto 99.7 4.1E-15 9E-20 162.9 32.5 244 500-747 26-304 (330)
177 KOG1524 WD40 repeat-containing 99.7 2E-16 4.4E-21 170.3 20.4 260 507-784 12-282 (737)
178 KOG1517 Guanine nucleotide bin 99.7 4.6E-16 9.9E-21 178.6 24.4 276 509-786 1064-1379(1387)
179 KOG0303 Actin-binding protein 99.7 6.8E-16 1.5E-20 161.4 22.0 230 520-750 43-297 (472)
180 KOG0649 WD40 repeat protein [G 99.7 1.5E-15 3.2E-20 150.0 23.0 224 553-785 12-271 (325)
181 KOG1034 Transcriptional repres 99.7 4E-16 8.6E-21 160.0 18.1 236 508-747 88-383 (385)
182 KOG1963 WD40 repeat protein [G 99.7 4.6E-15 1E-19 169.1 26.9 276 507-786 203-536 (792)
183 PRK01742 tolB translocation pr 99.7 1.8E-15 3.9E-20 171.8 23.2 231 530-769 183-426 (429)
184 KOG2110 Uncharacterized conser 99.7 6.7E-14 1.5E-18 146.0 32.3 231 509-748 5-249 (391)
185 KOG0649 WD40 repeat protein [G 99.7 1.1E-14 2.4E-19 143.9 25.1 266 511-785 12-313 (325)
186 KOG2445 Nuclear pore complex c 99.7 6.7E-15 1.5E-19 149.9 23.9 235 496-767 46-341 (361)
187 KOG0290 Conserved WD40 repeat- 99.7 8.5E-15 1.8E-19 148.0 22.7 268 510-779 45-357 (364)
188 KOG1523 Actin-related protein 99.7 9.3E-15 2E-19 149.7 23.2 223 505-728 6-260 (361)
189 KOG1310 WD40 repeat protein [G 99.7 8E-16 1.7E-20 166.1 14.9 213 500-712 41-310 (758)
190 KOG0303 Actin-binding protein 99.7 3.4E-15 7.4E-20 156.2 19.0 221 504-728 76-320 (472)
191 KOG1538 Uncharacterized conser 99.6 9.3E-15 2E-19 160.6 20.6 240 500-748 44-294 (1081)
192 KOG1587 Cytoplasmic dynein int 99.6 1.3E-14 2.9E-19 165.2 22.8 242 508-749 241-518 (555)
193 PRK03629 tolB translocation pr 99.6 1.1E-13 2.3E-18 157.2 30.1 233 531-769 179-428 (429)
194 PF02239 Cytochrom_D1: Cytochr 99.6 3.2E-13 6.8E-18 149.6 32.5 285 499-786 26-345 (369)
195 KOG4227 WD40 repeat protein [G 99.6 2.6E-14 5.6E-19 148.9 22.1 287 451-747 53-387 (609)
196 PRK01742 tolB translocation pr 99.6 2.1E-14 4.6E-19 163.0 23.4 218 502-728 196-426 (429)
197 KOG2139 WD40 repeat protein [G 99.6 1E-13 2.3E-18 143.9 25.5 273 509-785 98-428 (445)
198 KOG1272 WD40-repeat-containing 99.6 1.1E-15 2.3E-20 162.8 11.2 262 510-780 130-401 (545)
199 KOG2110 Uncharacterized conser 99.6 1.4E-13 3.1E-18 143.6 26.6 228 551-786 5-246 (391)
200 KOG4497 Uncharacterized conser 99.6 3.7E-14 8.1E-19 145.4 21.4 268 514-785 13-388 (447)
201 KOG1007 WD repeat protein TSSC 99.6 1.5E-14 3.2E-19 146.1 16.8 210 494-705 107-361 (370)
202 KOG1188 WD40 repeat protein [G 99.6 2E-14 4.4E-19 148.3 18.2 248 500-747 61-346 (376)
203 KOG0771 Prolactin regulatory e 99.6 1.2E-14 2.6E-19 154.0 16.4 191 513-705 148-354 (398)
204 PRK04922 tolB translocation pr 99.6 2.5E-13 5.4E-18 154.5 28.3 232 531-768 184-432 (433)
205 PRK05137 tolB translocation pr 99.6 3.6E-13 7.7E-18 153.4 29.4 232 531-769 182-433 (435)
206 KOG1445 Tumor-specific antigen 99.6 7.1E-14 1.5E-18 153.0 21.0 224 473-708 601-847 (1012)
207 KOG4497 Uncharacterized conser 99.6 3.7E-13 7.9E-18 138.2 24.6 270 509-781 48-425 (447)
208 KOG4594 Sequence-specific sing 99.6 7.6E-16 1.6E-20 154.1 4.4 69 6-75 12-80 (354)
209 KOG2111 Uncharacterized conser 99.6 2.9E-12 6.3E-17 131.6 30.2 265 511-782 7-316 (346)
210 KOG0771 Prolactin regulatory e 99.6 1.7E-13 3.7E-18 145.4 21.7 188 598-785 97-351 (398)
211 KOG2321 WD40 repeat protein [G 99.6 3.3E-13 7.3E-18 147.1 24.1 274 507-785 49-340 (703)
212 KOG2394 WD40 protein DMR-N9 [G 99.6 5.4E-13 1.2E-17 144.6 24.6 200 512-726 171-383 (636)
213 KOG3881 Uncharacterized conser 99.6 2.3E-13 4.9E-18 142.9 20.8 261 507-770 53-343 (412)
214 KOG2394 WD40 protein DMR-N9 [G 99.6 1.8E-13 3.9E-18 148.3 20.6 242 511-767 125-383 (636)
215 KOG1517 Guanine nucleotide bin 99.6 2.2E-13 4.7E-18 156.9 21.6 241 508-749 1108-1383(1387)
216 PRK02889 tolB translocation pr 99.6 1.2E-12 2.6E-17 148.6 27.8 233 531-769 176-425 (427)
217 KOG1524 WD40 repeat-containing 99.6 6.3E-14 1.4E-18 151.3 16.1 205 521-743 75-282 (737)
218 KOG1963 WD40 repeat protein [G 99.6 1.6E-12 3.4E-17 148.7 27.9 274 507-784 14-318 (792)
219 KOG1354 Serine/threonine prote 99.5 3.2E-13 7E-18 139.4 20.0 272 508-781 24-428 (433)
220 KOG1523 Actin-related protein 99.5 4.6E-13 9.9E-18 137.4 20.8 220 549-769 8-260 (361)
221 PRK03629 tolB translocation pr 99.5 2.9E-12 6.3E-17 145.5 28.3 220 503-728 192-428 (429)
222 PRK04922 tolB translocation pr 99.5 1.6E-12 3.5E-17 147.9 25.4 221 501-727 195-432 (433)
223 PRK02889 tolB translocation pr 99.5 2.1E-12 4.6E-17 146.6 23.7 222 503-728 189-425 (427)
224 KOG2315 Predicted translation 99.5 2.9E-11 6.4E-16 132.4 30.9 268 510-786 35-388 (566)
225 KOG0644 Uncharacterized conser 99.5 6.4E-14 1.4E-18 157.8 10.3 245 498-750 221-471 (1113)
226 PF10282 Lactonase: Lactonase, 99.5 2.1E-10 4.5E-15 126.7 38.1 259 508-766 35-345 (345)
227 TIGR02800 propeller_TolB tol-p 99.5 1.1E-11 2.4E-16 140.2 28.6 230 531-766 170-416 (417)
228 KOG1310 WD40 repeat protein [G 99.5 2.2E-13 4.7E-18 147.6 13.0 211 542-752 41-308 (758)
229 KOG1240 Protein kinase contain 99.5 4.5E-12 9.9E-17 148.5 24.6 249 536-786 1034-1332(1431)
230 PRK05137 tolB translocation pr 99.5 9.7E-12 2.1E-16 141.6 26.6 221 501-728 193-433 (435)
231 PRK00178 tolB translocation pr 99.5 2.8E-11 6E-16 137.7 29.4 232 532-769 180-428 (430)
232 KOG1009 Chromatin assembly com 99.5 3.4E-12 7.4E-17 134.7 19.7 264 467-749 79-374 (434)
233 KOG2111 Uncharacterized conser 99.5 2.3E-11 5E-16 125.1 24.8 226 553-785 7-253 (346)
234 KOG1272 WD40-repeat-containing 99.4 1.6E-13 3.5E-18 146.4 8.9 230 551-786 129-360 (545)
235 PF10282 Lactonase: Lactonase, 99.4 5.1E-10 1.1E-14 123.6 37.0 263 524-786 2-320 (345)
236 PF02239 Cytochrom_D1: Cytochr 99.4 8.7E-11 1.9E-15 130.2 30.4 261 522-786 6-300 (369)
237 KOG2321 WD40 repeat protein [G 99.4 7.5E-12 1.6E-16 136.7 21.1 234 549-786 49-300 (703)
238 PRK04792 tolB translocation pr 99.4 4.6E-11 1E-15 136.3 28.2 232 532-769 199-447 (448)
239 KOG3881 Uncharacterized conser 99.4 1.3E-11 2.8E-16 129.9 20.9 234 550-786 54-318 (412)
240 PF08662 eIF2A: Eukaryotic tra 99.4 1.7E-11 3.6E-16 123.9 20.9 108 675-786 58-177 (194)
241 KOG1409 Uncharacterized conser 99.4 6.6E-12 1.4E-16 130.0 18.0 249 497-748 12-271 (404)
242 KOG0322 G-protein beta subunit 99.4 3.7E-12 8E-17 127.6 14.4 199 504-704 50-322 (323)
243 KOG2139 WD40 repeat protein [G 99.4 3.5E-11 7.5E-16 125.4 21.9 225 552-780 99-367 (445)
244 KOG0974 WD-repeat protein WDR6 99.4 1.4E-11 3E-16 143.1 20.3 265 508-786 6-286 (967)
245 PF08662 eIF2A: Eukaryotic tra 99.4 4.2E-11 9.1E-16 121.0 20.3 156 555-713 9-186 (194)
246 PRK00178 tolB translocation pr 99.4 1.7E-10 3.7E-15 131.3 27.3 221 502-728 191-428 (430)
247 PRK04792 tolB translocation pr 99.4 1.9E-10 4E-15 131.4 27.0 218 504-727 212-446 (448)
248 COG5354 Uncharacterized protei 99.4 3.7E-10 8.1E-15 122.5 27.3 271 510-786 72-393 (561)
249 KOG4190 Uncharacterized conser 99.4 6.4E-12 1.4E-16 135.9 13.7 279 500-784 726-1032(1034)
250 TIGR02800 propeller_TolB tol-p 99.3 3.6E-10 7.8E-15 127.9 27.3 203 573-780 170-386 (417)
251 KOG1334 WD40 repeat protein [G 99.3 1.4E-11 3.1E-16 132.5 14.8 246 541-786 132-422 (559)
252 PRK01029 tolB translocation pr 99.3 7.9E-10 1.7E-14 125.4 29.1 236 531-770 165-426 (428)
253 COG2706 3-carboxymuconate cycl 99.3 7E-09 1.5E-13 109.2 32.9 261 507-767 37-345 (346)
254 TIGR02658 TTQ_MADH_Hv methylam 99.3 7.7E-09 1.7E-13 112.7 32.7 253 531-786 27-328 (352)
255 KOG2041 WD40 repeat protein [G 99.2 7.7E-10 1.7E-14 123.3 22.4 274 508-784 13-333 (1189)
256 PRK01029 tolB translocation pr 99.2 3.5E-09 7.5E-14 120.2 27.6 210 574-785 166-400 (428)
257 TIGR02658 TTQ_MADH_Hv methylam 99.2 5.3E-08 1.1E-12 106.2 34.3 232 517-755 53-338 (352)
258 KOG2315 Predicted translation 99.2 2.5E-09 5.3E-14 117.6 22.4 248 513-768 129-410 (566)
259 COG5354 Uncharacterized protei 99.2 3.3E-09 7.2E-14 115.2 23.1 269 508-786 31-346 (561)
260 KOG4547 WD40 repeat-containing 99.2 1.2E-09 2.5E-14 121.0 19.0 205 519-748 3-221 (541)
261 KOG2314 Translation initiation 99.2 6.4E-09 1.4E-13 113.8 23.8 268 508-781 249-560 (698)
262 KOG0309 Conserved WD40 repeat- 99.1 2E-10 4.2E-15 128.6 12.1 276 509-786 24-337 (1081)
263 COG4946 Uncharacterized protei 99.1 4E-08 8.7E-13 105.8 28.4 272 498-777 217-507 (668)
264 COG5170 CDC55 Serine/threonine 99.1 7.4E-10 1.6E-14 113.3 14.7 236 508-745 25-365 (460)
265 KOG4547 WD40 repeat-containing 99.1 4.8E-09 1E-13 116.1 21.7 179 605-785 3-217 (541)
266 PLN02919 haloacid dehalogenase 99.1 6.3E-08 1.4E-12 120.7 33.7 236 513-751 571-892 (1057)
267 TIGR03300 assembly_YfgL outer 99.1 3.8E-08 8.2E-13 110.0 28.4 253 520-786 104-377 (377)
268 PLN02919 haloacid dehalogenase 99.1 6E-08 1.3E-12 120.9 32.4 229 555-786 571-886 (1057)
269 KOG1354 Serine/threonine prote 99.1 5.3E-09 1.2E-13 108.7 18.9 232 465-707 37-361 (433)
270 COG2706 3-carboxymuconate cycl 99.1 2.2E-07 4.7E-12 98.2 31.2 256 530-785 15-318 (346)
271 PRK04043 tolB translocation pr 99.1 1.2E-07 2.7E-12 107.1 29.9 225 531-764 169-417 (419)
272 PF04762 IKI3: IKI3 family; I 99.0 2.7E-07 5.9E-12 113.1 34.4 276 507-786 73-454 (928)
273 PRK04043 tolB translocation pr 99.0 6.1E-08 1.3E-12 109.5 26.8 192 511-707 189-402 (419)
274 TIGR03300 assembly_YfgL outer 99.0 8.1E-08 1.7E-12 107.4 27.5 252 521-786 65-336 (377)
275 KOG2314 Translation initiation 99.0 6.4E-08 1.4E-12 106.1 25.2 268 513-786 214-523 (698)
276 KOG0280 Uncharacterized conser 99.0 1.3E-08 2.9E-13 104.0 18.7 236 509-745 69-331 (339)
277 COG4946 Uncharacterized protei 99.0 2.6E-07 5.6E-12 99.7 28.2 172 517-695 327-507 (668)
278 KOG1409 Uncharacterized conser 99.0 7.2E-09 1.6E-13 107.8 16.0 242 541-786 14-268 (404)
279 KOG0280 Uncharacterized conser 99.0 1.7E-08 3.7E-13 103.2 16.3 209 499-707 111-335 (339)
280 KOG0974 WD-repeat protein WDR6 99.0 3.2E-08 6.9E-13 115.7 20.1 191 511-706 89-289 (967)
281 KOG2041 WD40 repeat protein [G 98.9 6.1E-08 1.3E-12 108.6 20.6 230 500-734 62-325 (1189)
282 KOG1064 RAVE (regulator of V-A 98.9 5.9E-09 1.3E-13 126.4 13.2 196 504-714 2203-2407(2439)
283 PF08450 SGL: SMP-30/Gluconola 98.9 3.2E-06 6.9E-11 88.7 32.5 215 514-736 4-244 (246)
284 KOG1912 WD40 repeat protein [G 98.9 4.4E-07 9.6E-12 102.9 26.4 289 497-786 43-549 (1062)
285 KOG1832 HIV-1 Vpr-binding prot 98.9 1E-09 2.2E-14 124.8 5.4 262 498-776 1090-1377(1516)
286 KOG4532 WD40-like repeat conta 98.9 1.7E-07 3.7E-12 94.8 20.6 243 530-779 51-323 (344)
287 KOG1064 RAVE (regulator of V-A 98.9 8.4E-09 1.8E-13 125.2 12.0 218 548-781 2205-2439(2439)
288 KOG4190 Uncharacterized conser 98.9 6.3E-09 1.4E-13 113.1 9.7 203 544-750 728-951 (1034)
289 PF08450 SGL: SMP-30/Gluconola 98.8 1.1E-05 2.4E-10 84.6 32.1 214 555-777 3-244 (246)
290 PF13360 PQQ_2: PQQ-like domai 98.8 2.9E-06 6.2E-11 88.0 26.9 213 530-752 2-235 (238)
291 KOG0309 Conserved WD40 repeat- 98.8 1.1E-08 2.3E-13 115.0 8.8 204 503-706 108-340 (1081)
292 KOG0882 Cyclophilin-related pe 98.8 4.9E-08 1.1E-12 104.7 12.7 247 508-757 8-315 (558)
293 PF04762 IKI3: IKI3 family; I 98.8 3.5E-06 7.6E-11 103.6 30.5 270 510-785 22-376 (928)
294 KOG4532 WD40-like repeat conta 98.7 1.3E-06 2.8E-11 88.5 20.7 227 521-750 84-334 (344)
295 KOG1912 WD40 repeat protein [G 98.7 8.2E-07 1.8E-11 100.8 20.3 238 508-748 14-305 (1062)
296 PF07433 DUF1513: Protein of u 98.7 1.6E-05 3.5E-10 84.2 28.6 240 512-779 7-277 (305)
297 PF15492 Nbas_N: Neuroblastoma 98.7 6.5E-06 1.4E-10 84.9 24.7 227 514-752 2-264 (282)
298 PRK11138 outer membrane biogen 98.7 7.4E-06 1.6E-10 92.2 27.3 252 521-786 120-392 (394)
299 KOG4714 Nucleoporin [Nuclear s 98.7 2.2E-07 4.9E-12 93.7 12.3 248 512-786 39-316 (319)
300 KOG0882 Cyclophilin-related pe 98.6 9.5E-07 2.1E-11 95.0 17.1 213 499-713 43-313 (558)
301 KOG1645 RING-finger-containing 98.6 2E-06 4.3E-11 91.7 19.0 248 533-786 175-459 (463)
302 KOG3914 WD repeat protein WDR4 98.6 5.2E-07 1.1E-11 96.2 14.8 121 511-634 112-232 (390)
303 PRK11138 outer membrane biogen 98.6 1.2E-05 2.7E-10 90.4 27.0 253 521-786 69-351 (394)
304 COG5170 CDC55 Serine/threonine 98.6 2.7E-07 5.8E-12 94.9 11.7 230 550-786 25-307 (460)
305 KOG1645 RING-finger-containing 98.6 1.2E-06 2.7E-11 93.1 16.9 245 498-747 182-461 (463)
306 PF13360 PQQ_2: PQQ-like domai 98.6 1.2E-05 2.5E-10 83.4 24.3 209 572-786 2-228 (238)
307 KOG1832 HIV-1 Vpr-binding prot 98.6 2.1E-08 4.5E-13 114.4 3.5 202 540-752 1090-1296(1516)
308 KOG4714 Nucleoporin [Nuclear s 98.6 8.4E-07 1.8E-11 89.6 13.2 165 500-665 80-255 (319)
309 KOG1275 PAB-dependent poly(A) 98.6 9.3E-07 2E-11 102.1 15.0 264 507-786 52-340 (1118)
310 PF15492 Nbas_N: Neuroblastoma 98.5 1.5E-05 3.2E-10 82.2 22.0 196 512-716 46-270 (282)
311 KOG4649 PQQ (pyrrolo-quinoline 98.5 0.00011 2.3E-09 74.8 26.6 256 520-786 62-349 (354)
312 PF00930 DPPIV_N: Dipeptidyl p 98.5 8.8E-05 1.9E-09 82.3 29.1 257 518-777 1-346 (353)
313 KOG3914 WD repeat protein WDR4 98.5 2.7E-06 5.8E-11 90.9 15.7 158 511-673 64-232 (390)
314 PF08513 LisH: LisH; InterPro 98.5 1.3E-07 2.7E-12 63.1 3.5 27 12-38 1-27 (27)
315 KOG3621 WD40 repeat-containing 98.4 3.3E-05 7.2E-10 87.9 23.4 268 508-784 32-349 (726)
316 PF04053 Coatomer_WDAD: Coatom 98.4 2.3E-05 5E-10 88.7 22.1 216 550-785 31-259 (443)
317 PRK02888 nitrous-oxide reducta 98.4 4.6E-05 9.9E-10 87.7 23.3 222 520-748 140-405 (635)
318 KOG2695 WD40 repeat protein [G 98.4 9.7E-07 2.1E-11 92.2 8.5 157 514-674 216-386 (425)
319 PF00400 WD40: WD domain, G-be 98.4 1.2E-06 2.7E-11 63.7 6.8 39 499-537 1-39 (39)
320 KOG2114 Vacuolar assembly/sort 98.4 9.6E-05 2.1E-09 85.7 25.0 200 511-714 27-252 (933)
321 KOG2695 WD40 repeat protein [G 98.3 1.4E-06 3E-11 91.1 8.7 156 611-767 228-401 (425)
322 KOG3617 WD40 and TPR repeat-co 98.3 2.3E-05 4.9E-10 90.0 18.8 260 511-777 17-374 (1416)
323 PF14583 Pectate_lyase22: Olig 98.3 0.00085 1.9E-08 73.4 30.2 267 516-785 42-378 (386)
324 PF02897 Peptidase_S9_N: Proly 98.3 0.00081 1.8E-08 76.2 31.9 239 512-754 126-411 (414)
325 KOG2066 Vacuolar assembly/sort 98.3 1.7E-05 3.7E-10 91.2 17.7 181 508-705 38-233 (846)
326 KOG1920 IkappaB kinase complex 98.3 0.00011 2.4E-09 88.2 24.6 237 509-751 68-326 (1265)
327 cd00216 PQQ_DH Dehydrogenases 98.3 0.00029 6.3E-09 81.6 27.3 255 521-786 61-422 (488)
328 PF07433 DUF1513: Protein of u 98.3 0.00017 3.7E-09 76.6 22.6 191 596-786 6-245 (305)
329 PF08596 Lgl_C: Lethal giant l 98.3 0.00058 1.3E-08 76.4 28.2 252 511-779 3-327 (395)
330 KOG2114 Vacuolar assembly/sort 98.2 0.00021 4.6E-09 83.0 23.7 201 558-761 30-259 (933)
331 PF11768 DUF3312: Protein of u 98.2 0.0014 3E-08 74.1 28.7 87 699-786 238-327 (545)
332 PRK02888 nitrous-oxide reducta 98.2 0.00033 7.1E-09 80.8 24.2 178 603-786 201-402 (635)
333 KOG2066 Vacuolar assembly/sort 98.2 4E-05 8.7E-10 88.2 16.6 180 552-748 40-234 (846)
334 KOG1275 PAB-dependent poly(A) 98.2 3.1E-05 6.8E-10 89.9 15.5 179 520-704 146-341 (1118)
335 PF00400 WD40: WD domain, G-be 98.2 4.2E-06 9.1E-11 60.9 5.5 39 541-579 1-39 (39)
336 COG3391 Uncharacterized conser 98.1 0.0037 8E-08 70.1 31.0 249 533-784 13-279 (381)
337 KOG1920 IkappaB kinase complex 98.1 0.00036 7.8E-09 83.9 23.4 227 551-785 68-319 (1265)
338 COG0823 TolB Periplasmic compo 98.1 0.00034 7.4E-09 79.0 21.6 195 541-739 182-391 (425)
339 PF06433 Me-amine-dh_H: Methyl 98.1 0.0027 5.9E-08 68.3 26.9 238 513-756 39-329 (342)
340 PF04053 Coatomer_WDAD: Coatom 98.0 0.00083 1.8E-08 76.2 23.8 223 504-747 27-262 (443)
341 cd00216 PQQ_DH Dehydrogenases 98.0 0.0022 4.7E-08 74.4 26.9 232 522-761 111-438 (488)
342 KOG1008 Uncharacterized conser 98.0 2.9E-06 6.3E-11 95.0 2.2 198 508-706 55-276 (783)
343 PF00780 CNH: CNH domain; Int 98.0 0.003 6.4E-08 67.3 25.4 212 561-786 5-253 (275)
344 PF06433 Me-amine-dh_H: Methyl 97.9 0.0047 1E-07 66.6 25.6 254 531-786 17-318 (342)
345 PF00930 DPPIV_N: Dipeptidyl p 97.9 0.003 6.5E-08 70.1 25.3 226 509-736 42-346 (353)
346 COG0823 TolB Periplasmic compo 97.9 0.00035 7.6E-09 78.9 17.8 187 587-775 185-386 (425)
347 COG3391 Uncharacterized conser 97.9 0.0038 8.2E-08 70.0 25.7 215 511-728 75-309 (381)
348 PF06977 SdiA-regulated: SdiA- 97.9 0.0053 1.2E-07 64.2 24.9 198 502-702 14-247 (248)
349 PF00780 CNH: CNH domain; Int 97.9 0.0096 2.1E-07 63.3 27.6 222 519-755 5-263 (275)
350 KOG3617 WD40 and TPR repeat-co 97.9 0.00021 4.6E-09 82.3 15.0 70 512-581 62-131 (1416)
351 PF06977 SdiA-regulated: SdiA- 97.9 0.0068 1.5E-07 63.5 25.1 194 589-785 16-247 (248)
352 PF11768 DUF3312: Protein of u 97.8 0.00011 2.4E-09 82.7 10.9 76 507-584 257-332 (545)
353 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.8 0.018 4E-07 67.2 29.0 186 521-710 69-338 (527)
354 KOG1008 Uncharacterized conser 97.7 8E-06 1.7E-10 91.6 0.9 195 552-748 57-276 (783)
355 KOG4649 PQQ (pyrrolo-quinoline 97.7 0.005 1.1E-07 62.9 20.3 148 601-749 17-167 (354)
356 COG3386 Gluconolactonase [Carb 97.7 0.017 3.6E-07 62.6 24.6 213 557-777 30-274 (307)
357 PF04841 Vps16_N: Vps16, N-ter 97.6 0.087 1.9E-06 59.7 30.2 190 532-730 62-272 (410)
358 PRK10115 protease 2; Provision 97.6 0.17 3.6E-06 61.3 34.0 236 511-752 128-399 (686)
359 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.6 0.064 1.4E-06 62.7 29.7 232 521-754 120-497 (527)
360 PF04841 Vps16_N: Vps16, N-ter 97.6 0.025 5.5E-07 64.0 25.5 188 574-771 62-272 (410)
361 PF08596 Lgl_C: Lethal giant l 97.6 0.0096 2.1E-07 66.8 21.8 203 498-702 75-332 (395)
362 PF03178 CPSF_A: CPSF A subuni 97.5 0.0058 1.3E-07 66.8 19.5 163 618-785 3-199 (321)
363 KOG4640 Anaphase-promoting com 97.5 0.00033 7.1E-09 79.2 9.4 104 500-604 11-115 (665)
364 PF03178 CPSF_A: CPSF A subuni 97.5 0.019 4E-07 62.8 23.1 205 574-784 3-261 (321)
365 PF14583 Pectate_lyase22: Olig 97.5 0.21 4.5E-06 55.1 30.1 226 514-744 85-378 (386)
366 PF02897 Peptidase_S9_N: Proly 97.5 0.062 1.3E-06 60.9 27.6 217 553-771 125-383 (414)
367 KOG3621 WD40 repeat-containing 97.4 0.025 5.5E-07 65.1 21.8 104 508-613 75-187 (726)
368 COG3490 Uncharacterized protei 97.3 0.052 1.1E-06 56.5 21.5 246 514-785 72-345 (366)
369 COG3386 Gluconolactonase [Carb 97.2 0.11 2.3E-06 56.3 24.5 217 516-738 31-276 (307)
370 PF05096 Glu_cyclase_2: Glutam 97.2 0.16 3.4E-06 53.3 24.6 192 542-738 34-251 (264)
371 PRK13616 lipoprotein LpqB; Pro 97.2 0.05 1.1E-06 64.2 23.2 204 530-742 328-563 (591)
372 PF14727 PHTB1_N: PTHB1 N-term 97.1 0.69 1.5E-05 52.1 30.9 260 520-784 36-356 (418)
373 smart00320 WD40 WD40 repeats. 97.1 0.0012 2.6E-08 45.5 5.6 38 500-537 3-40 (40)
374 PRK13616 lipoprotein LpqB; Pro 97.1 0.041 8.9E-07 65.0 21.4 182 595-783 350-563 (591)
375 PRK10115 protease 2; Provision 97.1 0.49 1.1E-05 57.2 30.7 198 552-754 127-353 (686)
376 smart00667 LisH Lissencephaly 97.0 0.00091 2E-08 46.8 3.8 31 11-41 3-33 (34)
377 PF08553 VID27: VID27 cytoplas 97.0 0.038 8.2E-07 66.4 19.5 138 564-704 494-646 (794)
378 TIGR03118 PEPCTERM_chp_1 conse 96.9 0.69 1.5E-05 49.1 25.8 216 511-727 24-307 (336)
379 KOG4499 Ca2+-binding protein R 96.9 0.26 5.7E-06 50.1 21.2 202 563-767 27-262 (310)
380 smart00320 WD40 WD40 repeats. 96.9 0.0025 5.5E-08 43.7 5.4 38 542-579 3-40 (40)
381 KOG1897 Damage-specific DNA bi 96.8 1.2 2.7E-05 53.6 29.3 214 565-784 686-938 (1096)
382 PF14655 RAB3GAP2_N: Rab3 GTPa 96.8 0.46 9.9E-06 53.5 25.1 88 514-603 6-117 (415)
383 PF15390 DUF4613: Domain of un 96.8 0.23 4.9E-06 56.8 22.2 119 509-627 56-188 (671)
384 KOG2395 Protein involved in va 96.8 0.029 6.4E-07 62.7 14.8 130 649-780 349-493 (644)
385 PF08553 VID27: VID27 cytoplas 96.8 0.022 4.8E-07 68.3 15.1 126 654-780 502-640 (794)
386 PHA02713 hypothetical protein; 96.8 0.13 2.8E-06 60.7 21.4 214 532-754 273-540 (557)
387 PF14783 BBS2_Mid: Ciliary BBS 96.7 0.035 7.7E-07 50.2 12.6 101 512-620 2-109 (111)
388 KOG4441 Proteins containing BT 96.7 0.081 1.8E-06 62.4 18.9 214 563-781 285-534 (571)
389 PHA02713 hypothetical protein; 96.6 0.17 3.6E-06 59.8 20.9 204 574-786 273-531 (557)
390 KOG4441 Proteins containing BT 96.6 0.15 3.3E-06 60.2 20.4 227 520-753 284-552 (571)
391 PF14783 BBS2_Mid: Ciliary BBS 96.5 0.099 2.1E-06 47.3 14.1 101 554-660 2-110 (111)
392 COG5276 Uncharacterized conser 96.5 1.3 2.9E-05 46.6 27.0 266 509-786 86-367 (370)
393 PF05096 Glu_cyclase_2: Glutam 96.4 1.5 3.3E-05 46.1 26.8 194 497-697 31-251 (264)
394 KOG4499 Ca2+-binding protein R 96.3 0.65 1.4E-05 47.3 19.5 145 552-728 109-264 (310)
395 KOG2079 Vacuolar assembly/sort 96.3 0.077 1.7E-06 63.9 15.1 100 521-624 99-202 (1206)
396 PRK13684 Ycf48-like protein; P 96.2 2.5 5.5E-05 46.5 30.1 265 509-786 45-329 (334)
397 KOG4640 Anaphase-promoting com 96.2 0.021 4.5E-07 65.1 9.8 92 676-768 20-115 (665)
398 PF07995 GSDH: Glucose / Sorbo 96.2 2.3 5E-05 46.7 25.7 66 718-783 253-330 (331)
399 KOG2444 WD40 repeat protein [G 96.2 0.0071 1.5E-07 61.0 5.2 137 566-706 33-178 (238)
400 PF05694 SBP56: 56kDa selenium 96.1 1.3 2.8E-05 49.5 22.8 216 520-737 86-393 (461)
401 PF10647 Gmad1: Lipoprotein Lp 96.1 1.7 3.7E-05 45.8 23.4 155 596-750 25-200 (253)
402 KOG2395 Protein involved in va 96.0 0.069 1.5E-06 59.8 12.4 149 520-705 344-500 (644)
403 KOG2377 Uncharacterized conser 96.0 0.8 1.7E-05 50.7 20.1 121 508-630 65-190 (657)
404 COG3204 Uncharacterized protei 95.9 0.83 1.8E-05 48.2 19.1 191 505-697 81-304 (316)
405 PHA03098 kelch-like protein; P 95.9 0.32 6.9E-06 57.1 18.1 155 606-764 342-528 (534)
406 PF05694 SBP56: 56kDa selenium 95.8 1.7 3.6E-05 48.7 21.9 182 605-786 86-340 (461)
407 COG3490 Uncharacterized protei 95.8 0.48 1E-05 49.6 16.5 141 597-737 70-245 (366)
408 COG3204 Uncharacterized protei 95.8 1.8 3.9E-05 45.8 20.7 164 547-713 81-270 (316)
409 KOG1897 Damage-specific DNA bi 95.7 6 0.00013 48.1 27.0 241 532-776 471-732 (1096)
410 COG4257 Vgb Streptogramin lyas 95.5 4 8.6E-05 42.9 22.8 237 510-755 62-313 (353)
411 TIGR02604 Piru_Ver_Nterm putat 95.5 3.2 6.8E-05 46.3 23.3 141 553-697 15-204 (367)
412 TIGR03074 PQQ_membr_DH membran 95.5 2.8 6E-05 51.2 24.1 225 521-752 194-482 (764)
413 PHA03098 kelch-like protein; P 95.4 0.6 1.3E-05 54.8 18.4 182 520-707 294-513 (534)
414 PF10214 Rrn6: RNA polymerase 95.4 4 8.7E-05 50.2 25.9 174 549-748 77-277 (765)
415 KOG1916 Nuclear protein, conta 95.4 0.019 4.1E-07 67.5 5.4 174 504-710 127-328 (1283)
416 PF15390 DUF4613: Domain of un 95.4 0.51 1.1E-05 54.0 16.1 169 595-768 20-212 (671)
417 PF14870 PSII_BNR: Photosynthe 95.3 5.2 0.00011 43.3 28.5 219 551-779 16-253 (302)
418 KOG3630 Nuclear pore complex, 95.2 0.19 4.2E-06 60.9 12.7 142 553-695 102-262 (1405)
419 KOG2079 Vacuolar assembly/sort 95.2 0.21 4.5E-06 60.4 13.0 71 508-580 129-202 (1206)
420 COG4257 Vgb Streptogramin lyas 95.2 3.4 7.4E-05 43.3 20.0 185 554-752 64-267 (353)
421 PF14655 RAB3GAP2_N: Rab3 GTPa 95.1 3.7 8.1E-05 46.3 22.1 79 637-715 310-408 (415)
422 PLN02153 epithiospecifier prot 95.1 3.8 8.1E-05 45.1 22.2 171 606-779 85-324 (341)
423 COG5276 Uncharacterized conser 95.0 5.9 0.00013 42.0 24.6 227 511-746 130-368 (370)
424 PF10647 Gmad1: Lipoprotein Lp 95.0 5.3 0.00012 42.1 22.0 140 553-697 25-186 (253)
425 TIGR02604 Piru_Ver_Nterm putat 95.0 0.78 1.7E-05 51.2 16.5 107 671-779 66-204 (367)
426 PF10433 MMS1_N: Mono-function 95.0 9.7 0.00021 44.4 27.4 244 518-768 219-503 (504)
427 PF14727 PHTB1_N: PTHB1 N-term 94.9 8.8 0.00019 43.4 27.1 140 563-704 37-203 (418)
428 PF14870 PSII_BNR: Photosynthe 94.7 7.6 0.00017 42.0 32.6 265 509-785 16-301 (302)
429 KOG2444 WD40 repeat protein [G 94.7 0.064 1.4E-06 54.3 6.1 135 649-786 33-175 (238)
430 smart00036 CNH Domain found in 94.7 8 0.00017 41.9 29.8 229 520-757 12-280 (302)
431 PF02333 Phytase: Phytase; In 94.6 9.2 0.0002 42.6 23.2 192 519-713 66-299 (381)
432 PRK13684 Ycf48-like protein; P 94.6 8.9 0.00019 42.2 24.6 105 676-783 172-283 (334)
433 PF12894 Apc4_WD40: Anaphase-p 94.6 0.11 2.4E-06 39.6 5.7 35 508-543 10-44 (47)
434 PF10168 Nup88: Nuclear pore c 94.5 7.1 0.00015 47.4 23.8 95 551-666 84-181 (717)
435 COG3823 Glutamine cyclotransfe 94.5 1.4 3E-05 44.3 14.6 174 562-737 55-248 (262)
436 PLN00033 photosystem II stabil 94.4 11 0.00024 42.4 35.3 144 638-785 242-396 (398)
437 PF03022 MRJP: Major royal jel 94.2 8.9 0.00019 41.3 21.7 159 618-776 35-253 (287)
438 COG1520 FOG: WD40-like repeat 94.2 11 0.00025 41.8 29.0 191 520-716 68-279 (370)
439 PF12234 Rav1p_C: RAVE protein 94.0 1.3 2.8E-05 52.3 15.7 128 495-625 15-156 (631)
440 TIGR03074 PQQ_membr_DH membran 93.8 8.1 0.00018 47.3 22.4 170 610-786 263-475 (764)
441 PHA02790 Kelch-like protein; P 93.7 3.3 7.1E-05 48.0 18.5 178 520-707 271-472 (480)
442 PF12234 Rav1p_C: RAVE protein 93.6 2.2 4.7E-05 50.5 16.7 108 677-786 30-154 (631)
443 COG3292 Predicted periplasmic 93.6 5.6 0.00012 45.6 19.0 265 509-784 164-443 (671)
444 KOG3630 Nuclear pore complex, 93.3 0.71 1.5E-05 56.3 12.0 140 637-776 103-261 (1405)
445 PF10395 Utp8: Utp8 family; I 93.1 24 0.00051 42.0 24.2 119 633-752 128-264 (670)
446 TIGR03548 mutarot_permut cycli 93.1 14 0.0003 40.2 21.5 102 606-708 72-197 (323)
447 PHA02790 Kelch-like protein; P 93.1 5.3 0.00011 46.3 19.0 181 563-752 272-475 (480)
448 TIGR03548 mutarot_permut cycli 92.7 13 0.00027 40.6 20.4 108 520-630 72-199 (323)
449 PLN02193 nitrile-specifier pro 92.7 21 0.00046 41.2 23.1 188 562-754 175-417 (470)
450 PRK14131 N-acetylneuraminic ac 92.5 21 0.00046 39.9 22.4 65 520-585 38-118 (376)
451 KOG1916 Nuclear protein, conta 92.5 0.18 3.8E-06 59.8 5.4 118 512-630 186-328 (1283)
452 PF10168 Nup88: Nuclear pore c 92.2 14 0.00031 44.9 21.2 79 508-587 83-185 (717)
453 PF12894 Apc4_WD40: Anaphase-p 91.8 0.46 9.9E-06 36.2 5.3 31 551-581 11-41 (47)
454 KOG2247 WD40 repeat-containing 91.7 0.018 4E-07 63.7 -3.3 141 637-781 37-181 (615)
455 KOG2280 Vacuolar assembly/sort 91.6 20 0.00044 42.6 20.5 194 530-728 63-270 (829)
456 KOG1898 Splicing factor 3b, su 91.5 44 0.00095 41.4 27.9 99 683-784 940-1044(1205)
457 PF14781 BBS2_N: Ciliary BBSom 90.8 6.9 0.00015 36.8 13.0 110 641-752 5-130 (136)
458 PF08801 Nucleoporin_N: Nup133 90.8 14 0.0003 42.0 18.6 31 718-748 190-220 (422)
459 KOG1896 mRNA cleavage and poly 90.7 55 0.0012 41.2 25.9 136 647-785 1047-1210(1366)
460 COG3823 Glutamine cyclotransfe 90.6 7.1 0.00015 39.4 13.6 166 607-776 56-246 (262)
461 KOG4369 RTK signaling protein 90.3 0.29 6.2E-06 59.3 4.4 70 183-260 1755-1824(2131)
462 PF14761 HPS3_N: Hermansky-Pud 90.3 21 0.00046 36.4 17.0 102 522-626 29-164 (215)
463 KOG2247 WD40 repeat-containing 90.3 0.049 1.1E-06 60.5 -1.8 139 554-695 37-178 (615)
464 PLN02153 epithiospecifier prot 90.1 33 0.00072 37.6 24.4 144 520-668 32-229 (341)
465 COG5167 VID27 Protein involved 89.9 5 0.00011 45.4 13.1 141 605-747 478-632 (776)
466 PF10395 Utp8: Utp8 family; I 89.8 21 0.00047 42.4 18.9 162 508-673 128-314 (670)
467 PRK14131 N-acetylneuraminic ac 89.5 30 0.00065 38.6 19.7 39 741-779 314-353 (376)
468 PLN02193 nitrile-specifier pro 89.2 48 0.001 38.3 24.4 144 562-708 228-413 (470)
469 TIGR03547 muta_rot_YjhT mutatr 89.2 39 0.00084 37.1 22.4 41 740-780 291-332 (346)
470 KOG1983 Tomosyn and related SN 89.1 16 0.00034 46.2 18.4 225 510-751 36-268 (993)
471 PF07569 Hira: TUP1-like enhan 88.9 2.4 5.3E-05 43.6 9.6 61 725-786 18-93 (219)
472 PF10214 Rrn6: RNA polymerase 88.9 68 0.0015 39.6 27.4 155 507-665 77-277 (765)
473 TIGR03547 muta_rot_YjhT mutatr 88.6 42 0.00091 36.8 23.2 64 520-585 17-97 (346)
474 PF10433 MMS1_N: Mono-function 88.6 55 0.0012 38.1 24.4 221 560-785 219-473 (504)
475 PF14781 BBS2_N: Ciliary BBSom 88.2 14 0.00031 34.8 13.0 112 513-629 2-129 (136)
476 COG5167 VID27 Protein involved 88.1 5.1 0.00011 45.3 11.6 133 644-779 477-624 (776)
477 KOG2377 Uncharacterized conser 88.0 8.5 0.00018 43.1 13.1 100 675-776 65-171 (657)
478 PF08728 CRT10: CRT10; InterP 87.9 5.1 0.00011 47.9 12.4 113 511-624 102-245 (717)
479 PF07569 Hira: TUP1-like enhan 87.6 3.1 6.8E-05 42.8 9.4 67 641-707 17-97 (219)
480 COG5290 IkappaB kinase complex 87.1 13 0.00027 44.4 14.4 94 638-732 250-351 (1243)
481 KOG2280 Vacuolar assembly/sort 87.1 26 0.00057 41.8 17.0 174 509-688 83-271 (829)
482 PF14761 HPS3_N: Hermansky-Pud 87.0 38 0.00083 34.6 17.0 131 564-707 29-165 (215)
483 PF10313 DUF2415: Uncharacteri 86.6 2.5 5.4E-05 31.5 5.6 31 510-540 1-34 (43)
484 PRK05560 DNA gyrase subunit A; 86.3 97 0.0021 38.5 23.2 226 561-786 496-770 (805)
485 PF08728 CRT10: CRT10; InterP 86.2 16 0.00035 43.8 15.2 99 687-786 113-244 (717)
486 COG1506 DAP2 Dipeptidyl aminop 86.0 86 0.0019 37.6 23.2 144 547-695 55-234 (620)
487 KOG4460 Nuclear pore complex, 84.8 9.9 0.00021 43.2 11.7 24 637-660 106-129 (741)
488 COG4590 ABC-type uncharacteriz 84.7 8.4 0.00018 43.0 11.0 149 635-785 221-383 (733)
489 PF13449 Phytase-like: Esteras 84.6 67 0.0014 35.1 21.7 184 595-780 20-310 (326)
490 KOG3616 Selective LIM binding 84.5 11 0.00024 44.3 12.3 178 510-707 15-195 (1636)
491 PF12657 TFIIIC_delta: Transcr 84.3 6.9 0.00015 38.6 9.7 32 595-626 86-122 (173)
492 PF07250 Glyoxal_oxid_N: Glyox 84.1 18 0.00038 37.9 12.8 140 533-674 48-207 (243)
493 KOG1900 Nuclear pore complex, 84.1 10 0.00022 47.6 12.6 134 652-786 95-270 (1311)
494 PF02333 Phytase: Phytase; In 84.0 78 0.0017 35.4 22.4 178 607-786 68-288 (381)
495 PF07250 Glyoxal_oxid_N: Glyox 83.9 18 0.00038 37.9 12.7 126 658-783 48-194 (243)
496 KOG1898 Splicing factor 3b, su 83.6 85 0.0018 39.1 19.4 128 616-747 911-1048(1205)
497 TIGR03606 non_repeat_PQQ dehyd 83.5 91 0.002 35.8 31.6 57 507-563 27-90 (454)
498 PF12657 TFIIIC_delta: Transcr 83.2 5.8 0.00013 39.2 8.6 28 759-786 86-119 (173)
499 PF05935 Arylsulfotrans: Aryls 82.3 93 0.002 36.1 19.3 112 640-755 153-309 (477)
500 COG1506 DAP2 Dipeptidyl aminop 82.2 55 0.0012 39.3 17.9 205 553-779 14-236 (620)
No 1
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3.9e-43 Score=361.56 Aligned_cols=287 Identities=22% Similarity=0.429 Sum_probs=257.8
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
+++..++.||.+.|.|+.|+|+|+.||+|+.|.++++||+.+..+.++.++|...|.||+|+||++.||+|+.||+|++|
T Consensus 105 trCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lw 184 (480)
T KOG0271|consen 105 TRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLW 184 (480)
T ss_pred ceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEe
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecC----CCeEEEEEcCCCcEEEEeCCCCeeeEeecC---CeEEEEEeCCCCEEEE
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPK----KNDLFCSCDGNSEIRFWNLSQYSCARISKG---GTVQVRFQPRLGLLLA 651 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~----g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~---~i~~i~~sp~g~~Ll~ 651 (786)
|..+++.....+.+|...|++++|.|- ...++++++.||.|+|||+..+.++....+ .++|++|--+ +++++
T Consensus 185 dpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~-gliyS 263 (480)
T KOG0271|consen 185 DPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE-GLIYS 263 (480)
T ss_pred cCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC-ceEEe
Confidence 999999889999999999999999873 234788999999999999999888877664 5677777544 46777
Q ss_pred EECCCeEEEEEcCCCcEEEE------------------------------------------------------------
Q 044075 652 AASENVVSIFDVETDRLTHS------------------------------------------------------------ 671 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~------------------------------------------------------------ 671 (786)
++.|++|++|+...+.+++.
T Consensus 264 gS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgs 343 (480)
T KOG0271|consen 264 GSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGS 343 (480)
T ss_pred cCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEec
Confidence 77788888887655433222
Q ss_pred -------------------EecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCE
Q 044075 672 -------------------FKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPT 731 (786)
Q Consensus 672 -------------------l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~ 731 (786)
..+|..-|+.+.|+||++||++++-| .|++||-++|+.+.+|++|-..|..++|+.|.+.
T Consensus 344 Dd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRL 423 (480)
T KOG0271|consen 344 DDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRL 423 (480)
T ss_pred CCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccE
Confidence 23456678899999999999999999 9999999999999999999999999999999999
Q ss_pred EEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 732 LMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 732 L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|++|+.|.++++||+++.+.. -+.+|.+.|.++.|+|||..+++|+.|..+++|.
T Consensus 424 lVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 424 LVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred EEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 999999999999999999887 6778999999999999999999999999999995
No 2
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.5e-40 Score=347.02 Aligned_cols=287 Identities=26% Similarity=0.425 Sum_probs=267.5
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccC--CCEEEEEeCCCcE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPN--STQLATSSFDKTV 575 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspd--g~~Lasgs~Dg~I 575 (786)
....+..-.+.+.+|..+.||.|++.||||+.+|.++||+..+...+.++.+|...|.++.|+|. +..+|+|+.||+|
T Consensus 164 ~~~l~~SQ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtv 243 (459)
T KOG0272|consen 164 SLELVCSQVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTV 243 (459)
T ss_pred hhhhhhhhccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCce
Confidence 34445555577889999999999999999999999999999999999999999999999999996 5689999999999
Q ss_pred EEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe---ecCCeEEEEEeCCCCEEEEE
Q 044075 576 RIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI---SKGGTVQVRFQPRLGLLLAA 652 (786)
Q Consensus 576 ~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~---~~~~i~~i~~sp~g~~Ll~g 652 (786)
++|++++.. .+..+.+|...|..++|+|+|.+|. +++.|.+-++||++++..+.. +..++.+++|+++|..+++|
T Consensus 244 klw~~~~e~-~l~~l~gH~~RVs~VafHPsG~~L~-TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tG 321 (459)
T KOG0272|consen 244 KLWKLSQET-PLQDLEGHLARVSRVAFHPSGKFLG-TASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATG 321 (459)
T ss_pred eeeccCCCc-chhhhhcchhhheeeeecCCCceee-ecccccchhhcccccchhhHhhcccccccceeEecCCCceeecc
Confidence 999998865 6889999999999999999998766 999999999999999876644 44678999999999999999
Q ss_pred ECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeC-CCC
Q 044075 653 ASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHP-SYP 730 (786)
Q Consensus 653 s~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fsp-dg~ 730 (786)
+.|..-+|||+++++++..+.+|..+|.+|.|+|+|..|++|+.| +++|||++...++.++..|.+-|+.+.|+| .|.
T Consensus 322 GlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~ 401 (459)
T KOG0272|consen 322 GLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGY 401 (459)
T ss_pred CccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCe
Confidence 999999999999999999999999999999999999999999999 999999999999999999999999999998 788
Q ss_pred EEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 731 TLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 731 ~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+|++++.|++++||...+..++ .+.+|.+.|.++++++|+.+|+|++.|.+||+|.
T Consensus 402 fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 402 FLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 9999999999999999999887 6779999999999999999999999999999994
No 3
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=4.2e-38 Score=315.45 Aligned_cols=289 Identities=18% Similarity=0.348 Sum_probs=265.3
Q ss_pred cceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcE
Q 044075 496 AFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTV 575 (786)
Q Consensus 496 ~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I 575 (786)
.+.++..++|++|.++|.++.|++|.++|++++.||.+.|||.-+...++.+......|..++|+|.++++|+|+-|..+
T Consensus 42 ~i~~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~C 121 (343)
T KOG0286|consen 42 RIQMRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKC 121 (343)
T ss_pred eeeeeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCcee
Confidence 45667778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCC--c---ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeC-CC
Q 044075 576 RIWDAAKP--N---FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQP-RL 646 (786)
Q Consensus 576 ~VWdl~s~--~---~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp-~g 646 (786)
.||++.+. + ...+.+.+|.+.+.|+.|.++ ..|+ +++.|.++.+||++++..+..+. +.+.++.+.| ++
T Consensus 122 siy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~il-T~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ 199 (343)
T KOG0286|consen 122 SIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHIL-TGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDG 199 (343)
T ss_pred EEEecccccccccceeeeeecCccceeEEEEEcCC-CceE-ecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCC
Confidence 99999865 2 245678999999999999974 4454 99999999999999999888876 5678889999 89
Q ss_pred CEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC--CCceEEE
Q 044075 647 GLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS--GNKFHSC 723 (786)
Q Consensus 647 ~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~--~~~I~sv 723 (786)
+.|++|+.|+..++||++.+..+..|.+|...|++|+|.|+|.-|++|++| +.++||++....+..+... ..+|+++
T Consensus 200 ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv 279 (343)
T KOG0286|consen 200 NTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSV 279 (343)
T ss_pred CeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeE
Confidence 999999999999999999999999999999999999999999999999999 9999999998888777643 4679999
Q ss_pred EEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 724 IFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 724 ~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+|+..|++|++|..|..+.+||.-.++.+ .+.+|+..|+||..+|||..|+||+.|..||||.
T Consensus 280 ~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 280 AFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred EEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 99999999999999999999998877766 7789999999999999999999999999999994
No 4
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=2.3e-34 Score=327.68 Aligned_cols=287 Identities=28% Similarity=0.526 Sum_probs=257.6
Q ss_pred eeeeEEeecC-CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe--eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcE
Q 044075 499 FNEVSSIRKS-SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ--TECTPDDHNHIITDVRFRPNSTQLATSSFDKTV 575 (786)
Q Consensus 499 ~~~v~~l~~H-~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~--~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I 575 (786)
|.....+.+| ...|+|+.|+++|++|++++.|+.+++|+..+.+ ....+.+|...|.+++|+|++.++++++.|++|
T Consensus 148 ~~~~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~ti 227 (456)
T KOG0266|consen 148 FSLEQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTL 227 (456)
T ss_pred ceeeeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceE
Confidence 3335555554 8899999999999999999999999999998777 777788999999999999999999999999999
Q ss_pred EEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEE
Q 044075 576 RIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAA 652 (786)
Q Consensus 576 ~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~g 652 (786)
+|||+.....+++++.+|...|++++|+|++ .++++|+.|++|++||+++++++..+. ..+..++|++++..|+++
T Consensus 228 riwd~~~~~~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~ 306 (456)
T KOG0266|consen 228 RIWDLKDDGRNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSA 306 (456)
T ss_pred EEeeccCCCeEEEEecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEc
Confidence 9999966666889999999999999999999 778899999999999999988887665 678899999999999999
Q ss_pred ECCCeEEEEEcCCCc--EEEEEecCCCC--EEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCc---eEEEE
Q 044075 653 ASENVVSIFDVETDR--LTHSFKGHSTE--IHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNK---FHSCI 724 (786)
Q Consensus 653 s~dg~I~iwD~~t~~--~i~~l~~h~~~--I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~---I~sv~ 724 (786)
+.|+.|++||+.++. ++..+..+... +++++|+|++++|++++.| .+++||+..+.++..+..|... +.+..
T Consensus 307 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~ 386 (456)
T KOG0266|consen 307 SYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPT 386 (456)
T ss_pred CCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEeccc
Confidence 999999999999998 56777776655 9999999999999999999 9999999999999999988764 44555
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCeEE-EEccc-CCCeEEEEEcCCCCEEEEEe--CCCcEEEeC
Q 044075 725 FHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAH-DCVISALAQSPVTGMVASAS--HDKSVKIWK 786 (786)
Q Consensus 725 fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h-~~~V~slafspdg~~LaSgs--~DG~I~IWd 786 (786)
+++.+.++++++.|+.|++||+.++..+ .+.+| ...|..+.|++..+++++++ .|+.|++|+
T Consensus 387 ~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~ 452 (456)
T KOG0266|consen 387 LSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWK 452 (456)
T ss_pred ccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEec
Confidence 6788999999999999999999976655 67788 89999999999999999998 789999995
No 5
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=2.1e-35 Score=297.16 Aligned_cols=283 Identities=20% Similarity=0.407 Sum_probs=260.3
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcC-CCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNME-NFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~-t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
++..+.+|++.|.++.|+|+|.+||+|+.|..|.+|++. ..+....+++|+++|..+.|.+|++.|++++.|.+|+.||
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD 118 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWD 118 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEe
Confidence 455678999999999999999999999999999999954 5677788899999999999999999999999999999999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee--cCCeEEEEEeCCCCEEEEEECCCe
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS--KGGTVQVRFQPRLGLLLAAASENV 657 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~--~~~i~~i~~sp~g~~Ll~gs~dg~ 657 (786)
+++++ +.+.+.+|...|.++.-...|..++++++.|+++++||+++..+++.+ +...+++.|...+..+++|+-|+.
T Consensus 119 ~~tG~-~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ 197 (338)
T KOG0265|consen 119 AETGK-RIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGIDND 197 (338)
T ss_pred cccce-eeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeeccccCc
Confidence 99988 688899999999999977788999999999999999999999998887 678899999999999999999999
Q ss_pred EEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC----eeEEEEccCC----CceEEEEEeCC
Q 044075 658 VSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG----ECIHELSSSG----NKFHSCIFHPS 728 (786)
Q Consensus 658 I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~----~~i~~l~~~~----~~I~sv~fspd 728 (786)
|++||++.....+.+.+|...|+.+..+++|.++.+-+.| ++++||++.. .++..+.++. .....|+|+|+
T Consensus 198 ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~ 277 (338)
T KOG0265|consen 198 IKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPN 277 (338)
T ss_pred eeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCC
Confidence 9999999999999999999999999999999999999999 9999999863 4677777653 34568899999
Q ss_pred CCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 729 YPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 729 g~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~I 784 (786)
+..+-+|+.|..+++||.....++ .+.+|.+.|.++.|+|...+|.+|+.|++|.+
T Consensus 278 ~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 278 GTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred CCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEe
Confidence 999999999999999999885554 78899999999999999999999999999875
No 6
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=289.41 Aligned_cols=283 Identities=22% Similarity=0.394 Sum_probs=248.4
Q ss_pred eeeEEeecCCCCeEEEEEcCC-CCEEEEEECCCeEEEEEcC-----CCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCC
Q 044075 500 NEVSSIRKSSSKVTCCHFSSD-GKLLASAGHDKKVVVWNME-----NFQTECTPDDHNHIITDVRFRPNSTQLATSSFDK 573 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpd-g~~Lasgs~Dg~V~IWdl~-----t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg 573 (786)
....++++|++.|+.++..+. ...|++++.|.++.+|++. .+..++.+++|+..|..+..++|+++.++++.|+
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~ 85 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDG 85 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccc
Confidence 345688999999999999985 5688999999999999876 4677899999999999999999999999999999
Q ss_pred cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec----CCeEEEEEeCC--CC
Q 044075 574 TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK----GGTVQVRFQPR--LG 647 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----~~i~~i~~sp~--g~ 647 (786)
++++||+.+++ ..+.|.+|...|.+++|+++...++ +|+.|.+|++|++.......... +-+.+++|+|+ ..
T Consensus 86 ~lrlWDl~~g~-~t~~f~GH~~dVlsva~s~dn~qiv-SGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p 163 (315)
T KOG0279|consen 86 TLRLWDLATGE-STRRFVGHTKDVLSVAFSTDNRQIV-SGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNP 163 (315)
T ss_pred eEEEEEecCCc-EEEEEEecCCceEEEEecCCCceee-cCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCc
Confidence 99999999985 6889999999999999999987665 99999999999998766555443 56899999998 67
Q ss_pred EEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEe
Q 044075 648 LLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFH 726 (786)
Q Consensus 648 ~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fs 726 (786)
.|+.++.|++|++||+++.+....+.+|.+.++.++++|||.++++|+.| .+.+||++.++++..+ .+...|.+++|+
T Consensus 164 ~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl-~a~~~v~sl~fs 242 (315)
T KOG0279|consen 164 IIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSL-EAFDIVNSLCFS 242 (315)
T ss_pred EEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEec-cCCCeEeeEEec
Confidence 89999999999999999999999999999999999999999999999999 9999999999998877 567899999999
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEEE-----Eccc-----CCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 727 PSYPTLMVIGGYQSLELWNMAENKCMT-----IAAH-----DCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 727 pdg~~L~sgs~dg~I~IwDl~~~~~~~-----~~~h-----~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|+...|+.+ .+..|+|||+.++.++. ..+. .-...+++|++||..|++|-.|+.|++|.
T Consensus 243 pnrywL~~a-t~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~q 311 (315)
T KOG0279|consen 243 PNRYWLCAA-TATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQ 311 (315)
T ss_pred CCceeEeec-cCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEE
Confidence 986555544 45569999999987761 1111 33456789999999999999999999994
No 7
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.8e-35 Score=303.65 Aligned_cols=244 Identities=25% Similarity=0.445 Sum_probs=220.3
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeee-eecCCCCCCeEEEEEcc-----CCCEEEEEeCC
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTE-CTPDDHNHIITDVRFRP-----NSTQLATSSFD 572 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~-~~l~~h~~~V~sl~fsp-----dg~~Lasgs~D 572 (786)
-.+..+.++|..-|.|++|+|||+.||+|+.||.|++||.++++.+ ..+.+|...|++++|.| ..++|++++.|
T Consensus 147 eTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skD 226 (480)
T KOG0271|consen 147 ETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKD 226 (480)
T ss_pred CCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCC
Confidence 3577889999999999999999999999999999999999987765 57899999999999977 56799999999
Q ss_pred CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee-------------------
Q 044075 573 KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS------------------- 633 (786)
Q Consensus 573 g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~------------------- 633 (786)
|+|+|||+..+. ++..+.+|+.+|+|+.|- |..++++++.|++|++|+...+.+.+.+
T Consensus 227 g~vrIWd~~~~~-~~~~lsgHT~~VTCvrwG--G~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LR 303 (480)
T KOG0271|consen 227 GSVRIWDTKLGT-CVRTLSGHTASVTCVRWG--GEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLR 303 (480)
T ss_pred CCEEEEEccCce-EEEEeccCccceEEEEEc--CCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhh
Confidence 999999998766 789999999999999997 5668889999999999986432211000
Q ss_pred ---------------------------------------------------------------cCCeEEEEEeCCCCEEE
Q 044075 634 ---------------------------------------------------------------KGGTVQVRFQPRLGLLL 650 (786)
Q Consensus 634 ---------------------------------------------------------------~~~i~~i~~sp~g~~Ll 650 (786)
..-+..+.|+||+++++
T Consensus 304 tgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IA 383 (480)
T KOG0271|consen 304 TGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIA 383 (480)
T ss_pred ccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEE
Confidence 01256788999999999
Q ss_pred EEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCC
Q 044075 651 AAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSY 729 (786)
Q Consensus 651 ~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg 729 (786)
+++.|..|++||-++++.+.+|.+|-..|..|+|+.|.++|++|+.| +++|||+++.+....+.+|...|.++.|+|||
T Consensus 384 SaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG 463 (480)
T KOG0271|consen 384 SASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDG 463 (480)
T ss_pred EeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCC
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred CEEEEEECCCeEEEEE
Q 044075 730 PTLMVIGGYQSLELWN 745 (786)
Q Consensus 730 ~~L~sgs~dg~I~IwD 745 (786)
..+++|+.|..+++|.
T Consensus 464 ~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 464 QRVASGGKDKVLRLWR 479 (480)
T ss_pred ceeecCCCceEEEeec
Confidence 9999999999999995
No 8
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=1.8e-33 Score=293.12 Aligned_cols=282 Identities=29% Similarity=0.571 Sum_probs=253.7
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s 582 (786)
.++++|.++|++++|+|++++|++++.||.|++|++.+.+....+..|...+..+.|++++++|++++.||.|++||+.+
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~ 82 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLET 82 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCc
Confidence 46778999999999999999999999999999999999888888899999999999999999999999999999999987
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEE
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVS 659 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~ 659 (786)
.+ ....+..|...|.++.|++++ .++++++.++.|++||+++.+....+. ..+.+++|++++.++++++.++.|+
T Consensus 83 ~~-~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 160 (289)
T cd00200 83 GE-CVRTLTGHTSYVSSVAFSPDG-RILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIK 160 (289)
T ss_pred cc-ceEEEeccCCcEEEEEEcCCC-CEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEE
Confidence 65 466777888899999999984 466677789999999999777665544 5688999999988888888799999
Q ss_pred EEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECC
Q 044075 660 IFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY 738 (786)
Q Consensus 660 iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d 738 (786)
+||+++++.+..+..|...|.+++|+++++.+++++.+ .|++||++.++.+..+..+...+.++.|++++.++++++.+
T Consensus 161 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 240 (289)
T cd00200 161 LWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSED 240 (289)
T ss_pred EEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCC
Confidence 99999998888898899999999999999999888878 99999999999998888888899999999998888888879
Q ss_pred CeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 739 QSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 739 g~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+.|++||+.+++.. .+..|...|.+++|++++.+|++++.||.|+|||
T Consensus 241 ~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 241 GTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred CcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 99999999977665 5568889999999999999999999999999997
No 9
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.5e-35 Score=309.64 Aligned_cols=245 Identities=25% Similarity=0.402 Sum_probs=232.6
Q ss_pred eeeeEEeecCCCCeEEEEEcCC--CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSD--GKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVR 576 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpd--g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~ 576 (786)
...+.++++|++.|.++.|+|. +..||||+.||+|++|++++..++..+.+|...|..++|+|+|++|+|++.|.+-+
T Consensus 207 ~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWR 286 (459)
T KOG0272|consen 207 CNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWR 286 (459)
T ss_pred cceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchh
Confidence 3678899999999999999996 66899999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC---CeEEEEEeCCCCEEEEEE
Q 044075 577 IWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKG---GTVQVRFQPRLGLLLAAA 653 (786)
Q Consensus 577 VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~---~i~~i~~sp~g~~Ll~gs 653 (786)
+||++++. .+....+|...|.+|+|+++|. ++++|+.|..-+|||++++.++..+.+ .|..+.|+|+|-.+++|+
T Consensus 287 lWD~~tk~-ElL~QEGHs~~v~~iaf~~DGS-L~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs 364 (459)
T KOG0272|consen 287 LWDLETKS-ELLLQEGHSKGVFSIAFQPDGS-LAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGS 364 (459)
T ss_pred hcccccch-hhHhhcccccccceeEecCCCc-eeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecC
Confidence 99999977 4677889999999999999987 667999999999999999999988774 568899999999999999
Q ss_pred CCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcC-CCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCE
Q 044075 654 SENVVSIFDVETDRLTHSFKGHSTEIHSVCWDT-NGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPT 731 (786)
Q Consensus 654 ~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~sp-dg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~ 731 (786)
.|++++|||++....+..+.+|..-|+.|+|+| .|.+|++++.| +++||..+++.+++.+.+|++.|.++.+++++.+
T Consensus 365 ~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~ 444 (459)
T KOG0272|consen 365 SDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQA 444 (459)
T ss_pred CCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCce
Confidence 999999999999999999999999999999998 78999999999 9999999999999999999999999999999999
Q ss_pred EEEEECCCeEEEEE
Q 044075 732 LMVIGGYQSLELWN 745 (786)
Q Consensus 732 L~sgs~dg~I~IwD 745 (786)
+++++.|.+|++|.
T Consensus 445 i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 445 IATSSFDRTIKLWR 458 (459)
T ss_pred EEEeccCceeeecc
Confidence 99999999999995
No 10
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=5e-35 Score=300.82 Aligned_cols=288 Identities=24% Similarity=0.477 Sum_probs=269.2
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
.+.+...+.+|...|+.+.|+|+-.++++++.|++|++||..+++.+..+++|.+.|.+|+|+..|++|++++.|=.+++
T Consensus 97 Rp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~L 176 (406)
T KOG0295|consen 97 RPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKL 176 (406)
T ss_pred CCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhh
Confidence 34566788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC---eEEEEEeCCCCEEEEEEC
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG---TVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~---i~~i~~sp~g~~Ll~gs~ 654 (786)
||......+++.+.+|...|.+++|-|.+++++ +|+.|.+|+.|++.++.++..+.++ +..+..+.||..+++++.
T Consensus 177 Wd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~il-S~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~ 255 (406)
T KOG0295|consen 177 WDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHIL-SCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSN 255 (406)
T ss_pred eeHHHHHHHHHHhcCcccceeeEEEEecCCeee-ecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCC
Confidence 999886667888999999999999999997666 9999999999999999999988754 677888999999999999
Q ss_pred CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCC---------------CCEEEEEeCC-eEEEEECCCCeeEEEEccCCC
Q 044075 655 ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTN---------------GEYLASVSQD-SVRVWSLASGECIHELSSSGN 718 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spd---------------g~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~ 718 (786)
|.+|++|-+.++.+...+..|..+|.|++|.|. +.++.+++.| +|++||+.++.|+.++.+|.+
T Consensus 256 dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdn 335 (406)
T KOG0295|consen 256 DQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDN 335 (406)
T ss_pred CceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccc
Confidence 999999999999888899999999999999763 2589999999 999999999999999999999
Q ss_pred ceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 719 KFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 719 ~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.|..++|+|.|+||+++..|+++++||+.+..++ .+..|..-|++++|+.+..+++||+-|.++++|.
T Consensus 336 wVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 336 WVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred eeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence 9999999999999999999999999999999988 5668999999999999999999999999999995
No 11
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=7.4e-36 Score=310.52 Aligned_cols=276 Identities=20% Similarity=0.436 Sum_probs=248.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
-...|..+.|.|+|+.|++|+..|.+.+|+...+.....+..|..+|+++.|++++.++++|+.+|.|++|+..-.. +
T Consensus 95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn--V 172 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN--V 172 (464)
T ss_pred cccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh--h
Confidence 34579999999999999999999999999998888888889999999999999999999999999999999987654 4
Q ss_pred eeecC-CCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEc
Q 044075 588 QTYTG-HNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDV 663 (786)
Q Consensus 588 ~~~~~-h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~ 663 (786)
+.+.. |...|.+++|+|++. .|++|+.||+|+|||....+..+.+. -.+.++.|+|....+++++.|..|++||.
T Consensus 173 k~~~ahh~eaIRdlafSpnDs-kF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDp 251 (464)
T KOG0284|consen 173 KIIQAHHAEAIRDLAFSPNDS-KFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDP 251 (464)
T ss_pred HHhhHhhhhhhheeccCCCCc-eeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecC
Confidence 44444 459999999999655 55699999999999998877655555 45789999999999999999999999999
Q ss_pred CCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCC-CEEEEEECCCeE
Q 044075 664 ETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSY-PTLMVIGGYQSL 741 (786)
Q Consensus 664 ~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg-~~L~sgs~dg~I 741 (786)
+++.++.++.+|+..|..+.|.+++.+|+++|.| .+++||+++.+.+.++++|...|+++.|+|-. ..|.+|+.||.|
T Consensus 252 rSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsv 331 (464)
T KOG0284|consen 252 RSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSV 331 (464)
T ss_pred CCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCce
Confidence 9999999999999999999999999999999999 99999999999999999999999999999965 467788899999
Q ss_pred EEEECCCCeEE--EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 742 ELWNMAENKCM--TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 742 ~IwDl~~~~~~--~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
..|.+...+.+ .-.+|...|++++|+|-|.+|++|+.|.++++|.
T Consensus 332 vh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 332 VHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWT 378 (464)
T ss_pred EEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeec
Confidence 99999854444 3448999999999999999999999999999993
No 12
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=3.3e-34 Score=293.52 Aligned_cols=292 Identities=19% Similarity=0.346 Sum_probs=267.3
Q ss_pred cccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeC
Q 044075 492 ETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSF 571 (786)
Q Consensus 492 ~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~ 571 (786)
....+..|+..+.+.+|.+-|.|+++.|...+|++|+.|++|+|||+.+++...++.+|...|..+++++...||++++.
T Consensus 134 rPeWHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ge 213 (460)
T KOG0285|consen 134 RPEWHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGE 213 (460)
T ss_pred CccccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecC
Confidence 34456688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCE
Q 044075 572 DKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGL 648 (786)
Q Consensus 572 Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~ 648 (786)
|+.|+.||++..+ .++.+.+|-+.|.|++.+|.-+.+ ++|+.|.++++||+++...+..+. ..+..+.+.|-...
T Consensus 214 dk~VKCwDLe~nk-vIR~YhGHlS~V~~L~lhPTldvl-~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpq 291 (460)
T KOG0285|consen 214 DKQVKCWDLEYNK-VIRHYHGHLSGVYCLDLHPTLDVL-VTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQ 291 (460)
T ss_pred CCeeEEEechhhh-hHHHhccccceeEEEeccccceeE-EecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCc
Confidence 9999999999877 688999999999999999987654 599999999999999988777765 56778889998999
Q ss_pred EEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCC
Q 044075 649 LLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPS 728 (786)
Q Consensus 649 Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspd 728 (786)
+++|+.|++|++||++.++....+..|...|.+++.+|....|++++.|.|+.|++..+..+..+.+|...|.+++...|
T Consensus 292 vit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f~~nlsgh~~iintl~~nsD 371 (460)
T KOG0285|consen 292 VITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEFLQNLSGHNAIINTLSVNSD 371 (460)
T ss_pred eEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCccceeccCCccchhhccccccceeeeeeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEE---------cccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 729 YPTLMVIGGYQSLELWNMAENKCMTI---------AAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 729 g~~L~sgs~dg~I~IwDl~~~~~~~~---------~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+ ++++|+..|.|.+||.+++..... ...+..|++.+|...+..|+||..|.+|++|+
T Consensus 372 ~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~k 437 (460)
T KOG0285|consen 372 G-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYK 437 (460)
T ss_pred c-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEe
Confidence 5 688999999999999998865421 12356799999999999999999999999995
No 13
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=4.8e-33 Score=273.44 Aligned_cols=263 Identities=21% Similarity=0.406 Sum_probs=237.6
Q ss_pred CEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc-eeeeecCCCCCeEEE
Q 044075 522 KLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF-CLQTYTGHNNHVMSL 600 (786)
Q Consensus 522 ~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~-~~~~~~~h~~~V~sl 600 (786)
-+|++++.|.+|++|...++.+..++....+.|..+.+.|+++.||+++. -.||+||+++... ++..+.+|...|+++
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaV 89 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAV 89 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEE
Confidence 47999999999999999999999999999999999999999999999885 5799999998775 788999999999999
Q ss_pred EEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec-CCC
Q 044075 601 DFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG-HST 677 (786)
Q Consensus 601 ~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~-h~~ 677 (786)
.|..+|+.++ +|++||+++|||++...+.+.+. ..+.++..+|+...|+++..+|.|++||+....+.+.+.. ...
T Consensus 90 gF~~dgrWMy-TgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~ 168 (311)
T KOG0315|consen 90 GFQCDGRWMY-TGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDT 168 (311)
T ss_pred EEeecCeEEE-ecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCc
Confidence 9999888665 99999999999999977766554 7899999999999999999999999999998866665543 557
Q ss_pred CEEEEEEcCCCCEEEEEeCC-eEEEEECCCC------eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC-
Q 044075 678 EIHSVCWDTNGEYLASVSQD-SVRVWSLASG------ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN- 749 (786)
Q Consensus 678 ~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~------~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~- 749 (786)
.|.++...|||.+++.+... +.++|++-.. +++..+..|.+.+..|.++|++++|++++.|.+++||+.++.
T Consensus 169 ~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~ 248 (311)
T KOG0315|consen 169 SIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFF 248 (311)
T ss_pred ceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCce
Confidence 89999999999999998877 9999998753 467788899999999999999999999999999999999987
Q ss_pred e-EEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 750 K-CMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 750 ~-~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+ ...+.+|...|++++||.|+.||+||+.|+.+++|+
T Consensus 249 kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~ 286 (311)
T KOG0315|consen 249 KLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWD 286 (311)
T ss_pred eeEEEeecCCceEEeeeeccCccEEEecCCCCceeecc
Confidence 2 236779999999999999999999999999999997
No 14
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=2.9e-32 Score=267.96 Aligned_cols=284 Identities=23% Similarity=0.341 Sum_probs=245.2
Q ss_pred eeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe--e
Q 044075 466 SFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ--T 543 (786)
Q Consensus 466 ~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~--~ 543 (786)
.++.....|-.+.++.+. +-.+.+++....+.|..+.+.||+++||+++ .-.|++||+.+.+ +
T Consensus 11 viLvsA~YDhTIRfWqa~--------------tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~np~P 75 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQAL--------------TGICSRTIQHPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSNNPNP 75 (311)
T ss_pred eEEEeccCcceeeeeehh--------------cCeEEEEEecCccceeeEEEcCCcchhhhcc-CCeeEEEEccCCCCCc
Confidence 445556666666666544 3467888888889999999999999999987 5679999998765 5
Q ss_pred eeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEe
Q 044075 544 ECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWN 623 (786)
Q Consensus 544 ~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwD 623 (786)
+.++.+|...|+.|.|..+|+.+++|++||+++|||++... ......|..+|+++..+|+...|| +|+.+|.|++||
T Consensus 76 v~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~--~qR~~~~~spVn~vvlhpnQteLi-s~dqsg~irvWD 152 (311)
T KOG0315|consen 76 VATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLS--CQRNYQHNSPVNTVVLHPNQTELI-SGDQSGNIRVWD 152 (311)
T ss_pred eeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcc--cchhccCCCCcceEEecCCcceEE-eecCCCcEEEEE
Confidence 88999999999999999999999999999999999999854 444455779999999999988887 999999999999
Q ss_pred CCCCeeeEee----cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC------cEEEEEecCCCCEEEEEEcCCCCEEEE
Q 044075 624 LSQYSCARIS----KGGTVQVRFQPRLGLLLAAASENVVSIFDVETD------RLTHSFKGHSTEIHSVCWDTNGEYLAS 693 (786)
Q Consensus 624 l~~~~~~~~~----~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~------~~i~~l~~h~~~I~sv~~spdg~~Las 693 (786)
+....+.... ...+.++.+.|+|.+++++...|..++|++-+. +++..++.|...|..+.+|||++||++
T Consensus 153 l~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat 232 (311)
T KOG0315|consen 153 LGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLAT 232 (311)
T ss_pred ccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEe
Confidence 9987655433 256788999999999999999999999998764 467788899999999999999999999
Q ss_pred EeCC-eEEEEECCCC-eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEc
Q 044075 694 VSQD-SVRVWSLASG-ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQS 767 (786)
Q Consensus 694 gs~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafs 767 (786)
++.| +++||++++. +....+.+|...+..|+|+.|+.||++++.|+.+++||+..++.+ ...+|.....|++..
T Consensus 233 ~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 233 CSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred ecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence 9999 9999999987 666788899999999999999999999999999999999998876 556888877777653
No 15
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=1.8e-32 Score=289.71 Aligned_cols=274 Identities=22% Similarity=0.365 Sum_probs=250.5
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceee
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQ 588 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~ 588 (786)
+..|+|++|+.+|.+||+|+.||.++||+. ++..+.++..|.++|.++.|+.+|++|++++.|+++.+||..++. ...
T Consensus 235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~-~~q 312 (524)
T KOG0273|consen 235 NKDVTSLDWNNDGTLLATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGT-VKQ 312 (524)
T ss_pred cCCcceEEecCCCCeEEEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCce-EEE
Confidence 457999999999999999999999999995 478888999999999999999999999999999999999998877 577
Q ss_pred eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe---ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCC
Q 044075 589 TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI---SKGGTVQVRFQPRLGLLLAAASENVVSIFDVET 665 (786)
Q Consensus 589 ~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~---~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t 665 (786)
.+.-|..+-.++.|-.+ .-|++++.|+.|+++.+....++.. +.+.|.++.|+|.+..|++++.|++++||....
T Consensus 313 ~f~~~s~~~lDVdW~~~--~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~ 390 (524)
T KOG0273|consen 313 QFEFHSAPALDVDWQSN--DEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQ 390 (524)
T ss_pred eeeeccCCccceEEecC--ceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCC
Confidence 77778887788888744 3567999999999999987666554 447789999999999999999999999999999
Q ss_pred CcEEEEEecCCCCEEEEEEcCCC---------CEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEE
Q 044075 666 DRLTHSFKGHSTEIHSVCWDTNG---------EYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVI 735 (786)
Q Consensus 666 ~~~i~~l~~h~~~I~sv~~spdg---------~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sg 735 (786)
......+.+|...|..+.|+|.| ..+++++.| +|++||+..+.++++|..|..+|.+++|+|+++|+++|
T Consensus 391 ~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsG 470 (524)
T KOG0273|consen 391 SNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASG 470 (524)
T ss_pred CcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEec
Confidence 99999999999999999999964 468888888 99999999999999999999999999999999999999
Q ss_pred ECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 736 GGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 736 s~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+.||.|.||++.+++.+......+.|..|+|+.+|.+|..+-.||.|++-|
T Consensus 471 s~dg~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvld 521 (524)
T KOG0273|consen 471 SLDGCVHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLGACASDGSVCVLD 521 (524)
T ss_pred CCCCeeEeccccchheeEeecCCCeEEEEEEcCCCCEEEEEecCCCceEEE
Confidence 999999999999999998888888999999999999999999999998854
No 16
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.8e-33 Score=292.67 Aligned_cols=289 Identities=17% Similarity=0.311 Sum_probs=246.7
Q ss_pred cceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC---CeeeeecCCCCCCeEEEEEccCCCEEEEEeCC
Q 044075 496 AFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN---FQTECTPDDHNHIITDVRFRPNSTQLATSSFD 572 (786)
Q Consensus 496 ~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t---~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D 572 (786)
.+++.+...+..|++.|+-+.||++|++||+++.|.+..||.+.. .+..+++.+|..+|.-|.|+||.++|++|+.|
T Consensus 211 qip~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~ 290 (519)
T KOG0293|consen 211 QIPSQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFD 290 (519)
T ss_pred cCCchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCch
Confidence 345677788999999999999999999999999999999998764 45688899999999999999999999999999
Q ss_pred CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE---eecCCeEEEEEeCCCCEE
Q 044075 573 KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR---ISKGGTVQVRFQPRLGLL 649 (786)
Q Consensus 573 g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~---~~~~~i~~i~~sp~g~~L 649 (786)
..+++||+.++......-.+|...+.+++|.||+..++ +|+.|+.|..||++...... +....+.+++..+||+++
T Consensus 291 e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V-~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~v 369 (519)
T KOG0293|consen 291 EVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFV-TGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYV 369 (519)
T ss_pred HheeeccCCcchhhhhcccCcCCCcceeEEccCCceeE-ecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEE
Confidence 99999999998843333345568899999999998866 89999999999998643211 122457889999999999
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCc---eEEEEE
Q 044075 650 LAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNK---FHSCIF 725 (786)
Q Consensus 650 l~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~---I~sv~f 725 (786)
++.+.|..|++|+.++...+..+. ...+|++++++.+++++++.-.+ .|.+||++..+.+..+.+|... |.+|--
T Consensus 370 l~v~~d~~i~l~~~e~~~dr~lis-e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFg 448 (519)
T KOG0293|consen 370 LLVTVDKKIRLYNREARVDRGLIS-EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFG 448 (519)
T ss_pred EEEecccceeeechhhhhhhcccc-ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccC
Confidence 999999999999998876555444 55789999999999999998888 9999999988888888888543 444433
Q ss_pred eCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCC-EEEEEeCCCcEEEeC
Q 044075 726 HPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTG-MVASASHDKSVKIWK 786 (786)
Q Consensus 726 spdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~-~LaSgs~DG~I~IWd 786 (786)
-.+..++++|+.|+.|+||+..+++.+ .+.+|...|+||+|+|... ++|++|+||+||||.
T Consensus 449 g~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg 511 (519)
T KOG0293|consen 449 GGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWG 511 (519)
T ss_pred CCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEec
Confidence 345589999999999999999999887 7889999999999999665 899999999999994
No 17
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-32 Score=272.91 Aligned_cols=270 Identities=20% Similarity=0.300 Sum_probs=229.1
Q ss_pred EeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec
Q 044075 468 LSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP 547 (786)
Q Consensus 468 l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l 547 (786)
+.+...|-..+++.+... ....-.+++.++||+..|..+..++||.+.++++.|+++++||+.+++....|
T Consensus 31 l~sasrDk~ii~W~L~~d---------d~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f 101 (315)
T KOG0279|consen 31 LVSASRDKTIIVWKLTSD---------DIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRF 101 (315)
T ss_pred EEEcccceEEEEEEeccC---------ccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEE
Confidence 444445556666665543 11122568899999999999999999999999999999999999999999999
Q ss_pred CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCC-CeEEEEEcCCCcEEEEeCCC
Q 044075 548 DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKK-NDLFCSCDGNSEIRFWNLSQ 626 (786)
Q Consensus 548 ~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g-~~ll~sgs~Dg~I~iwDl~~ 626 (786)
.+|...|.+++|++|.+.|++|+.|.+|++|++.........-..|.+.|.|+.|+|+. +.++++++.|++|++||+++
T Consensus 102 ~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~ 181 (315)
T KOG0279|consen 102 VGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRN 181 (315)
T ss_pred EecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCC
Confidence 99999999999999999999999999999999876542222222347899999999985 56777999999999999999
Q ss_pred CeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEE
Q 044075 627 YSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWS 703 (786)
Q Consensus 627 ~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwD 703 (786)
.+....+. +.++.++++|||...++|+.||.+.+||++.++.+..+. |...|.+++|+|+...|+.+....|+|||
T Consensus 182 ~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnrywL~~at~~sIkIwd 260 (315)
T KOG0279|consen 182 CQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNRYWLCAATATSIKIWD 260 (315)
T ss_pred cchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCCceeEeeccCCceEEEe
Confidence 87766554 567889999999999999999999999999999988877 88999999999998888888777999999
Q ss_pred CCCCeeEEEEccC---------CCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 704 LASGECIHELSSS---------GNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 704 l~s~~~i~~l~~~---------~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
+.++.++.+++.. .-...+++|+++|..|+++-.|+.|++|.+.
T Consensus 261 l~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 261 LESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred ccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 9999888776532 2235678999999999999999999999875
No 18
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=1.8e-32 Score=289.83 Aligned_cols=281 Identities=24% Similarity=0.435 Sum_probs=246.1
Q ss_pred eeEEeecCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEcCC--Ce--eeeec----------CCCCCCeEEEEEccCCCE
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGK-LLASAGHDKKVVVWNMEN--FQ--TECTP----------DDHNHIITDVRFRPNSTQ 565 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~-~Lasgs~Dg~V~IWdl~t--~~--~~~~l----------~~h~~~V~sl~fspdg~~ 565 (786)
.++.++ |..+|++++|+|-.. +|++|+.|-..++|++.. .. ....+ ......|++++|+.+|..
T Consensus 171 ~~kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~ 249 (524)
T KOG0273|consen 171 KAKVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTL 249 (524)
T ss_pred ceeecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCe
Confidence 344555 999999999999655 899999999999999874 11 11111 112357999999999999
Q ss_pred EEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEE
Q 044075 566 LATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRF 642 (786)
Q Consensus 566 Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~ 642 (786)
||+|++||.++||+.... .+.++..|+++|.++.|+.+|.+++ +++.|+++.+||..++.....+. .+...+.|
T Consensus 250 LatG~~~G~~riw~~~G~--l~~tl~~HkgPI~slKWnk~G~yil-S~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW 326 (524)
T KOG0273|consen 250 LATGSEDGEARIWNKDGN--LISTLGQHKGPIFSLKWNKKGTYIL-SGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDW 326 (524)
T ss_pred EEEeecCcEEEEEecCch--hhhhhhccCCceEEEEEcCCCCEEE-eccCCccEEEEeccCceEEEeeeeccCCccceEE
Confidence 999999999999998654 4788899999999999999998877 99999999999998888776554 33356778
Q ss_pred eCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceE
Q 044075 643 QPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFH 721 (786)
Q Consensus 643 sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~ 721 (786)
-.+ ..|++.+.|+.|+|+-+....++.++.+|.++|.++.|+|.|.+|++||+| +++||......+...+..|...|.
T Consensus 327 ~~~-~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~ 405 (524)
T KOG0273|consen 327 QSN-DEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIY 405 (524)
T ss_pred ecC-ceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhcccee
Confidence 655 568899999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred EEEEeCCCC---------EEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 722 SCIFHPSYP---------TLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 722 sv~fspdg~---------~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.+.|+|.++ .+++++.|++|++||+..+.++ .+..|..+|++|+|+|+|++||+|+.||.|.||+
T Consensus 406 t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws 480 (524)
T KOG0273|consen 406 TIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWS 480 (524)
T ss_pred eEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecc
Confidence 999999764 7899999999999999999988 5669999999999999999999999999999995
No 19
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.6e-31 Score=295.41 Aligned_cols=286 Identities=23% Similarity=0.401 Sum_probs=254.6
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECC-CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHD-KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVR 576 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~D-g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~ 576 (786)
.|..+..+.-...+|..++|+..|.+||.|+.. |.+.||+..+..-+....+|...|++++++|||.++|+|++||.|+
T Consensus 296 ~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVK 375 (893)
T KOG0291|consen 296 DFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVK 375 (893)
T ss_pred CceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEE
Confidence 567888888888999999999999999998754 8999999999888999999999999999999999999999999999
Q ss_pred EEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC----eEEEEEeCCCCEEEEE
Q 044075 577 IWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG----TVQVRFQPRLGLLLAA 652 (786)
Q Consensus 577 VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~----i~~i~~sp~g~~Ll~g 652 (786)
|||..++- |..++..|++.|+.+.|+..++.++ +.+-||+|+.||+....+.+.+..+ ..+++..|.|..+.+|
T Consensus 376 vWn~~Sgf-C~vTFteHts~Vt~v~f~~~g~~ll-ssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG 453 (893)
T KOG0291|consen 376 VWNTQSGF-CFVTFTEHTSGVTAVQFTARGNVLL-SSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAG 453 (893)
T ss_pred EEeccCce-EEEEeccCCCceEEEEEEecCCEEE-EeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEee
Confidence 99998865 8999999999999999999888666 8889999999999999988887743 4678889999999999
Q ss_pred ECCC-eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe-eEEEEccCCCceEEEEEeCCC
Q 044075 653 ASEN-VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE-CIHELSSSGNKFHSCIFHPSY 729 (786)
Q Consensus 653 s~dg-~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~-~i~~l~~~~~~I~sv~fspdg 729 (786)
+.|. .|++|++.+|+++..+.+|.++|.+++|+|++..|+++|.| +|++||+-... .+.++ .+...+..++|+|+|
T Consensus 454 ~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl-~i~sdvl~vsfrPdG 532 (893)
T KOG0291|consen 454 AQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETL-EIRSDVLAVSFRPDG 532 (893)
T ss_pred ccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeE-eeccceeEEEEcCCC
Confidence 9885 69999999999999999999999999999999999999999 99999997653 33344 456789999999999
Q ss_pred CEEEEEECCCeEEEEECCCCeEE-----------------EE----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 730 PTLMVIGGYQSLELWNMAENKCM-----------------TI----AAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 730 ~~L~sgs~dg~I~IwDl~~~~~~-----------------~~----~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+.|++++.||.|.+||...+..+ .+ .......+.|++++||++|++|+..+.|+||+
T Consensus 533 ~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~ 610 (893)
T KOG0291|consen 533 KELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYD 610 (893)
T ss_pred CeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEE
Confidence 99999999999999999875433 11 12346799999999999999999999999985
No 20
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=1.7e-32 Score=306.49 Aligned_cols=271 Identities=25% Similarity=0.436 Sum_probs=237.8
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC-------------------------------eeeeecCCCCC
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF-------------------------------QTECTPDDHNH 552 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~-------------------------------~~~~~l~~h~~ 552 (786)
++..-...++|+.|++|+.+||.|..|..|++|.+... ....++.+|.+
T Consensus 373 T~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~G 452 (707)
T KOG0263|consen 373 TFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSG 452 (707)
T ss_pred EEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCC
Confidence 44444567999999999999999999999999987621 12234678999
Q ss_pred CeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe
Q 044075 553 IITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI 632 (786)
Q Consensus 553 ~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~ 632 (786)
+|..+.|+|+.++|++|+.|++||+|.+.+.. ++..+.+|..+|+++.|+|.| +.|++++.|++.++|........++
T Consensus 453 PVyg~sFsPd~rfLlScSED~svRLWsl~t~s-~~V~y~GH~~PVwdV~F~P~G-yYFatas~D~tArLWs~d~~~PlRi 530 (707)
T KOG0263|consen 453 PVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWS-CLVIYKGHLAPVWDVQFAPRG-YYFATASHDQTARLWSTDHNKPLRI 530 (707)
T ss_pred ceeeeeecccccceeeccCCcceeeeecccce-eEEEecCCCcceeeEEecCCc-eEEEecCCCceeeeeecccCCchhh
Confidence 99999999999999999999999999999976 688888999999999999985 5677999999999999998888877
Q ss_pred ec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe
Q 044075 633 SK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE 708 (786)
Q Consensus 633 ~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~ 708 (786)
+. ..+.|+.|+|+..++++|+.|.+|++||+.++..++.|.+|..+|.+++|+|+|++|++|++| .|++||+.+++
T Consensus 531 faghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~ 610 (707)
T KOG0263|consen 531 FAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGS 610 (707)
T ss_pred hcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCc
Confidence 66 557889999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-------------------------EEcccCCCeEE
Q 044075 709 CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-------------------------TIAAHDCVISA 763 (786)
Q Consensus 709 ~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-------------------------~~~~h~~~V~s 763 (786)
.+..+.+|.+.|.++.|+.+|..|++++.|.+|++||+..-... .+.....+|.+
T Consensus 611 ~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~ 690 (707)
T KOG0263|consen 611 LVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSFYTKNTPVVG 690 (707)
T ss_pred chhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhcccccccccccccccccccCCCCcceeeeeeecCceEEE
Confidence 99999999999999999999999999999999999998642211 23334567888
Q ss_pred EEEcCCCCEEEEE
Q 044075 764 LAQSPVTGMVASA 776 (786)
Q Consensus 764 lafspdg~~LaSg 776 (786)
|.|...+-.|+.|
T Consensus 691 l~FtrrNl~L~~g 703 (707)
T KOG0263|consen 691 LHFTRRNLLLAVG 703 (707)
T ss_pred EEEeccceeEEec
Confidence 8888766455544
No 21
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=2.5e-31 Score=264.52 Aligned_cols=281 Identities=22% Similarity=0.464 Sum_probs=238.2
Q ss_pred eeeeEEeecCCCCeEEEEEcCC-CCEEEEEECCCeEEEEEcCC---Ceeeeec-CCCCCCeEEEEEccCCCEEEEEeCCC
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSD-GKLLASAGHDKKVVVWNMEN---FQTECTP-DDHNHIITDVRFRPNSTQLATSSFDK 573 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpd-g~~Lasgs~Dg~V~IWdl~t---~~~~~~l-~~h~~~V~sl~fspdg~~Lasgs~Dg 573 (786)
+..+..+.+|.+.|..++|+|- |..||+|+.|+.|+||+... ..+...+ .+|+..|++++|+|.|++|++++.|.
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~ 83 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA 83 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc
Confidence 4567789999999999999997 88999999999999999884 4455444 57999999999999999999999999
Q ss_pred cEEEEcCCCCc-ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC---CeeeEeec---CCeEEEEEeCCC
Q 044075 574 TVRIWDAAKPN-FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ---YSCARISK---GGTVQVRFQPRL 646 (786)
Q Consensus 574 ~I~VWdl~s~~-~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~---~~~~~~~~---~~i~~i~~sp~g 646 (786)
++.||.-..++ .++..+.+|...|.|++|+++|++ |++|+.|..|.||.+.. .++..++. ..+..+.|+|..
T Consensus 84 t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~-LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~ 162 (312)
T KOG0645|consen 84 TVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNY-LATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTE 162 (312)
T ss_pred eEEEeecCCCceeEEeeeeccccceeEEEEcCCCCE-EEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCc
Confidence 99999876544 467789999999999999998875 56999999999999874 34444444 556778999999
Q ss_pred CEEEEEECCCeEEEEEcCC---CcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEE
Q 044075 647 GLLLAAASENVVSIFDVET---DRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHS 722 (786)
Q Consensus 647 ~~Ll~gs~dg~I~iwD~~t---~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~s 722 (786)
..|++++.|++|++|+-.. ..++.++.+|...|.+++|++.|..|+++++| +|+||-..+. .-..|...+..
T Consensus 163 dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~----~~~~~sr~~Y~ 238 (312)
T KOG0645|consen 163 DLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD----LSGMHSRALYD 238 (312)
T ss_pred ceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC----cchhcccceEe
Confidence 9999999999999998772 37889999999999999999999999999999 9999986532 11235678889
Q ss_pred EEEeCCCCEEEEEECCCeEEEEECCCCe---EE-----EEcccCCCeEEEEEcCC-CCEEEEEeCCCcEEEeC
Q 044075 723 CIFHPSYPTLMVIGGYQSLELWNMAENK---CM-----TIAAHDCVISALAQSPV-TGMVASASHDKSVKIWK 786 (786)
Q Consensus 723 v~fspdg~~L~sgs~dg~I~IwDl~~~~---~~-----~~~~h~~~V~slafspd-g~~LaSgs~DG~I~IWd 786 (786)
+.|. ...|++++.|+.|++|...... .. ....|...|+++.|.|. .++|++|++||.|++|.
T Consensus 239 v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~ 309 (312)
T KOG0645|consen 239 VPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWE 309 (312)
T ss_pred eeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEE
Confidence 9998 4579999999999999766431 11 34578899999999994 67999999999999994
No 22
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=5.6e-31 Score=281.50 Aligned_cols=288 Identities=23% Similarity=0.384 Sum_probs=243.2
Q ss_pred ceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC---CCCCCeEEEEEccCCCEEEEEeCCC
Q 044075 497 FSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD---DHNHIITDVRFRPNSTQLATSSFDK 573 (786)
Q Consensus 497 ~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~---~h~~~V~sl~fspdg~~Lasgs~Dg 573 (786)
.+|+...+++.|..-|.|+.|+|||+++|+++.||+|.|||=.+++.+..+. .|.+.|.+|+|+||+..|++++.|.
T Consensus 178 PPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDk 257 (603)
T KOG0318|consen 178 PPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADK 257 (603)
T ss_pred CCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCc
Confidence 3677778999999999999999999999999999999999999999999997 8999999999999999999999999
Q ss_pred cEEEEcCCCCcc------------------------------------------eeeeecCCCCCeEEEEEecCCCeEEE
Q 044075 574 TVRIWDAAKPNF------------------------------------------CLQTYTGHNNHVMSLDFHPKKNDLFC 611 (786)
Q Consensus 574 ~I~VWdl~s~~~------------------------------------------~~~~~~~h~~~V~sl~~sp~g~~ll~ 611 (786)
+++|||+.+.+. ....+.+|...|+++..+|++.+++
T Consensus 258 t~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~- 336 (603)
T KOG0318|consen 258 TIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIY- 336 (603)
T ss_pred eEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEE-
Confidence 999999876541 1223457999999999999997665
Q ss_pred EEcCCCcEEEEeCCCCeeeE-------------------------------ee-------------------------c-
Q 044075 612 SCDGNSEIRFWNLSQYSCAR-------------------------------IS-------------------------K- 634 (786)
Q Consensus 612 sgs~Dg~I~iwDl~~~~~~~-------------------------------~~-------------------------~- 634 (786)
+|+.||.|.-|+..++..-+ .. .
T Consensus 337 SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d 416 (603)
T KOG0318|consen 337 SGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSD 416 (603)
T ss_pred eeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCC
Confidence 99999999999975322100 00 0
Q ss_pred ---------------------------CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcE--EEEEecCCCCEEEEEEc
Q 044075 635 ---------------------------GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRL--THSFKGHSTEIHSVCWD 685 (786)
Q Consensus 635 ---------------------------~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~--i~~l~~h~~~I~sv~~s 685 (786)
....+++++|++..+++|+.|+.|+||.+....+ ...+..|..+|++|+|+
T Consensus 417 ~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vayS 496 (603)
T KOG0318|consen 417 GGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYS 496 (603)
T ss_pred CCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEEC
Confidence 0124567889999999999999999999987643 33455699999999999
Q ss_pred CCCCEEEEEeCC-eEEEEECCCCeeE-EEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe--EEEEcccCCCe
Q 044075 686 TNGEYLASVSQD-SVRVWSLASGECI-HELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK--CMTIAAHDCVI 761 (786)
Q Consensus 686 pdg~~Lasgs~D-~I~vwDl~s~~~i-~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~--~~~~~~h~~~V 761 (786)
||+.||++|... .|.+||+.+.+.. ..+..|...|.+++|+|+...+++|+-|-.|.||++.... .....+|...|
T Consensus 497 pd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~iknAH~~gV 576 (603)
T KOG0318|consen 497 PDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIKNAHLGGV 576 (603)
T ss_pred CCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEeccccccCc
Confidence 999999999988 9999999987653 3455689999999999999999999999999999998643 23445899899
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 762 SALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 762 ~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+.|.|-. ...|++.+.|-.||+|.
T Consensus 577 n~v~wld-e~tvvSsG~Da~iK~W~ 600 (603)
T KOG0318|consen 577 NSVAWLD-ESTVVSSGQDANIKVWN 600 (603)
T ss_pred eeEEEec-CceEEeccCcceeEEec
Confidence 9999974 45788999999999995
No 23
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=3.9e-33 Score=296.09 Aligned_cols=286 Identities=19% Similarity=0.351 Sum_probs=249.5
Q ss_pred eeeeEEeecCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcCC-CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSS-DGKLLASAGHDKKVVVWNMEN-FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVR 576 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t-~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~ 576 (786)
-+.+.++.+|+..|+++.|.| .+.+|++++.|+.|+||++.. +++++++.+|..+|.+++|+.+|..|++++.|+.|+
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lK 283 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLK 283 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeee
Confidence 356788999999999999999 899999999999999999876 899999999999999999999999999999999999
Q ss_pred EEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEE
Q 044075 577 IWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAA 653 (786)
Q Consensus 577 VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs 653 (786)
+||++++. +...+. ....++|+.|+|++.++|++|+.|+.|+.||+++++.+.... +.+..+.|-+++.++++.+
T Consensus 284 lwDtETG~-~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissS 361 (503)
T KOG0282|consen 284 LWDTETGQ-VLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSS 361 (503)
T ss_pred eeccccce-EEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeec
Confidence 99999988 344443 346789999999998899999999999999999999776544 7789999999999999999
Q ss_pred CCCeEEEEEcCCCcEEEEEec-CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC---eeEEEEccC--CCceEEEEEe
Q 044075 654 SENVVSIFDVETDRLTHSFKG-HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG---ECIHELSSS--GNKFHSCIFH 726 (786)
Q Consensus 654 ~dg~I~iwD~~t~~~i~~l~~-h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~---~~i~~l~~~--~~~I~sv~fs 726 (786)
.|+.++||+.+...++..+.. +.....+|..+|++.++++-+.| .|.+|.+... ...+.+.+| .+.-..|.|+
T Consensus 362 Ddks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fS 441 (503)
T KOG0282|consen 362 DDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFS 441 (503)
T ss_pred cCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEc
Confidence 999999999998866654432 44556789999999999999999 9999987643 223445555 3456678999
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCC-CEEEEEeCCCcEEEeC
Q 044075 727 PSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVT-GMVASASHDKSVKIWK 786 (786)
Q Consensus 727 pdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg-~~LaSgs~DG~I~IWd 786 (786)
|||.+|++|..||.+.+||.++-+.+ .+..|...+..+.|+|.. ..+|||+.||.|+|||
T Consensus 442 pDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 442 PDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred CCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 99999999999999999999988776 778999999999999965 4899999999999997
No 24
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=1.4e-30 Score=317.07 Aligned_cols=280 Identities=19% Similarity=0.313 Sum_probs=237.5
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC----e----eeeecCCCCCCeEEEEEcc-CCCEEEEEeCCCc
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF----Q----TECTPDDHNHIITDVRFRP-NSTQLATSSFDKT 574 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~----~----~~~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~ 574 (786)
.+..|.+.|++++|+|+|++||+|+.|+.|+||++... . ....+. +...|.+++|++ ++.+|++++.||+
T Consensus 478 ~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~ 556 (793)
T PLN00181 478 DLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGV 556 (793)
T ss_pred cccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCe
Confidence 34569999999999999999999999999999997532 1 122233 346799999987 4789999999999
Q ss_pred EEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--CCeEEEEEe-CCCCEEEE
Q 044075 575 VRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--GGTVQVRFQ-PRLGLLLA 651 (786)
Q Consensus 575 I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~s-p~g~~Ll~ 651 (786)
|+|||+.++. .+..+.+|...|++++|+|.+..+|++|+.|+.|++||++++.++..+. ..+.++.|+ +++..|++
T Consensus 557 v~lWd~~~~~-~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~lat 635 (793)
T PLN00181 557 VQVWDVARSQ-LVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAF 635 (793)
T ss_pred EEEEECCCCe-EEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEE
Confidence 9999998866 5778889999999999998666677799999999999999887765544 467788885 56889999
Q ss_pred EECCCeEEEEEcCCCc-EEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC------CeeEEEEccCCCceEEE
Q 044075 652 AASENVVSIFDVETDR-LTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS------GECIHELSSSGNKFHSC 723 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~-~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s------~~~i~~l~~~~~~I~sv 723 (786)
|+.|+.|++||+++.+ .+..+.+|...|.++.|. ++.+|++++.| +|+|||++. ..++..+.+|...+.++
T Consensus 636 gs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v 714 (793)
T PLN00181 636 GSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFV 714 (793)
T ss_pred EeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEE
Confidence 9999999999998865 567788899999999997 78899999999 999999974 35788899999999999
Q ss_pred EEeCCCCEEEEEECCCeEEEEECCCCeEE--------------EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 724 IFHPSYPTLMVIGGYQSLELWNMAENKCM--------------TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 724 ~fspdg~~L~sgs~dg~I~IwDl~~~~~~--------------~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.|++++.+|++|+.|+.|++|+....... ....|...|.+++|++++.+|++|+.||.|+||+
T Consensus 715 ~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~ 791 (793)
T PLN00181 715 GLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILE 791 (793)
T ss_pred EEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEe
Confidence 99999999999999999999998654322 1123556799999999999999999999999996
No 25
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.4e-31 Score=296.06 Aligned_cols=288 Identities=22% Similarity=0.401 Sum_probs=261.1
Q ss_pred eeeeeEEeecCCCCeEEEEEc-CCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFS-SDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVR 576 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafS-pdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~ 576 (786)
..+.++.+-|..+.|.+++|- |+.++||+++..+.+++|++.+..+. .+.+|+..|.++....+|.+|++|+.|.+++
T Consensus 312 ~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svi 390 (775)
T KOG0319|consen 312 ELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVI 390 (775)
T ss_pred ccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEE
Confidence 446677788889999999875 57789999999999999999887776 8899999999999666778999999999999
Q ss_pred EEcCCCCc---ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee------------eEeecCCeEEEE
Q 044075 577 IWDAAKPN---FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC------------ARISKGGTVQVR 641 (786)
Q Consensus 577 VWdl~s~~---~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~------------~~~~~~~i~~i~ 641 (786)
+|.++++. .++....+|.+.|.+++++..+..+|++++.|++|++|++...+. ...+...|.+++
T Consensus 391 lWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Va 470 (775)
T KOG0319|consen 391 LWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVA 470 (775)
T ss_pred EEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceE
Confidence 99884432 245567799999999999988999999999999999999986221 122447789999
Q ss_pred EeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCce
Q 044075 642 FQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKF 720 (786)
Q Consensus 642 ~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I 720 (786)
++|+...+++|+.|.+.+||+++.......+.+|...|.||.|++....++++|.| +|+||.+.+..|+++|.+|...|
T Consensus 471 ia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aV 550 (775)
T KOG0319|consen 471 IAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAV 550 (775)
T ss_pred ecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCcccee
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 721 HSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 721 ~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
..+.|-.+++.|++++.||-|++|++.++.|. .+..|.+.|++++.++.+.+++||+.||.|.+|+
T Consensus 551 lra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 551 LRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred EeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEee
Confidence 99999999999999999999999999999998 7789999999999999999999999999999995
No 26
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=5.7e-30 Score=273.80 Aligned_cols=285 Identities=19% Similarity=0.332 Sum_probs=242.9
Q ss_pred eeeEEeecCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGK-LLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~-~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
..+..+.+|...|.+|+|-|... .++||+.|++|.+|+=..++...++..|...|.|+.|+|||.+|++++.||.|.+|
T Consensus 138 ~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iy 217 (603)
T KOG0318|consen 138 NSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIY 217 (603)
T ss_pred CccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEE
Confidence 45778999999999999999766 59999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcceeeeec---CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---------------------
Q 044075 579 DAAKPNFCLQTYT---GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--------------------- 634 (786)
Q Consensus 579 dl~s~~~~~~~~~---~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--------------------- 634 (786)
|-.+++. +..+. +|.+.|.+++|+||+..++ +++.|.+++|||+.+.++++.+.
T Consensus 218 DGktge~-vg~l~~~~aHkGsIfalsWsPDs~~~~-T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lIt 295 (603)
T KOG0318|consen 218 DGKTGEK-VGELEDSDAHKGSIFALSWSPDSTQFL-TVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLIT 295 (603)
T ss_pred cCCCccE-EEEecCCCCccccEEEEEECCCCceEE-EecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEE
Confidence 9999884 55555 8999999999999998877 99999999999997655433221
Q ss_pred -------------------------CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEE-----------EEEec----
Q 044075 635 -------------------------GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLT-----------HSFKG---- 674 (786)
Q Consensus 635 -------------------------~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i-----------~~l~~---- 674 (786)
..|+++..++++.+|++|+.||.|.-||..++..- ..+..
T Consensus 296 VSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~ 375 (603)
T KOG0318|consen 296 VSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESG 375 (603)
T ss_pred EEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCC
Confidence 24677889999999999999999999998765311 11100
Q ss_pred -----------------------C-------------------------------------------CCCEEEEEEcCCC
Q 044075 675 -----------------------H-------------------------------------------STEIHSVCWDTNG 688 (786)
Q Consensus 675 -----------------------h-------------------------------------------~~~I~sv~~spdg 688 (786)
+ .-...+++++|++
T Consensus 376 ~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~ 455 (603)
T KOG0318|consen 376 ELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDG 455 (603)
T ss_pred cEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCC
Confidence 0 1113477889999
Q ss_pred CEEEEEeCC-eEEEEECCCCee--EEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE--EEcccCCCeEE
Q 044075 689 EYLASVSQD-SVRVWSLASGEC--IHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM--TIAAHDCVISA 763 (786)
Q Consensus 689 ~~Lasgs~D-~I~vwDl~s~~~--i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~--~~~~h~~~V~s 763 (786)
.++++|+.| .|+||.+..++. ...+..|..+|++++|+|++.||+++...+.+.+||+.+.+.. ...-|...|.|
T Consensus 456 ~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~ 535 (603)
T KOG0318|consen 456 SEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINC 535 (603)
T ss_pred CEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEE
Confidence 999999999 999999987653 3345678999999999999999999999999999999988775 34469999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEeC
Q 044075 764 LAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 764 lafspdg~~LaSgs~DG~I~IWd 786 (786)
++|+|+..++|||+-|-.|.||+
T Consensus 536 ~aWsP~n~~vATGSlDt~Viiys 558 (603)
T KOG0318|consen 536 VAWSPNNKLVATGSLDTNVIIYS 558 (603)
T ss_pred EEeCCCceEEEeccccceEEEEE
Confidence 99999999999999999999995
No 27
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.98 E-value=1.6e-31 Score=298.77 Aligned_cols=235 Identities=26% Similarity=0.498 Sum_probs=217.2
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc------------------------------ceeeeecCCCCCeEEE
Q 044075 551 NHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN------------------------------FCLQTYTGHNNHVMSL 600 (786)
Q Consensus 551 ~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~------------------------------~~~~~~~~h~~~V~sl 600 (786)
...++|..|++|+..||.|..|..|++|.+...+ .....+.+|.++|..+
T Consensus 378 ~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~ 457 (707)
T KOG0263|consen 378 YQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGC 457 (707)
T ss_pred CCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeee
Confidence 3468999999999999999999999999876311 1234577999999999
Q ss_pred EEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC---CeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCC
Q 044075 601 DFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKG---GTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHST 677 (786)
Q Consensus 601 ~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~---~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~ 677 (786)
.|+|+.++|+ +|+.|++|++|.+.+..++...++ ++..+.|+|.|-+|++++.|++-++|......+.+.+.+|.+
T Consensus 458 sFsPd~rfLl-ScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghls 536 (707)
T KOG0263|consen 458 SFSPDRRFLL-SCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLS 536 (707)
T ss_pred eeccccccee-eccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhccccc
Confidence 9999988666 999999999999999999887774 567899999999999999999999999999999999999999
Q ss_pred CEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEc
Q 044075 678 EIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIA 755 (786)
Q Consensus 678 ~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~ 755 (786)
.|.|+.|+|+..|+++||.| +|++||+.+|..++.|.+|.++|.+++|+|+|++|++|+.|+.|.|||+.+++.+ .+.
T Consensus 537 DV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~ 616 (707)
T KOG0263|consen 537 DVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLK 616 (707)
T ss_pred ccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhh
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999999998776 788
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 756 AHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 756 ~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+|.+.|.+|.|+.||.+||+|+.|.+|++||
T Consensus 617 ~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD 647 (707)
T KOG0263|consen 617 GHTGTIYSLSFSRDGNVLASGGADNSVRLWD 647 (707)
T ss_pred cccCceeEEEEecCCCEEEecCCCCeEEEEE
Confidence 9999999999999999999999999999997
No 28
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.98 E-value=3.7e-30 Score=265.22 Aligned_cols=282 Identities=15% Similarity=0.255 Sum_probs=241.0
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcC
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl 580 (786)
-+.++..|+..|.+|+.+|+.+++|||+.|..-.||++.++.....+.+|++.|+++.|+.++.+||||..+|.|+||+.
T Consensus 56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~ 135 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKV 135 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEc
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC---CeEEEEEeCCCCEEEEEECCCe
Q 044075 581 AKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKG---GTVQVRFQPRLGLLLAAASENV 657 (786)
Q Consensus 581 ~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~---~i~~i~~sp~g~~Ll~gs~dg~ 657 (786)
.++.. ...+...-..|.-+.|||.+. ++++|+.||.|.+|.+.+....+.+.+ .+++-+|.|+|+.++++..||+
T Consensus 136 stg~~-~~~~~~e~~dieWl~WHp~a~-illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgt 213 (399)
T KOG0296|consen 136 STGGE-QWKLDQEVEDIEWLKWHPRAH-ILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGT 213 (399)
T ss_pred ccCce-EEEeecccCceEEEEeccccc-EEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCce
Confidence 98774 445545567899999999766 555899999999999998766666554 4566789999999999999999
Q ss_pred EEEEEcCCCcEEEEEec------C---------------------------------------------CCCEEE---EE
Q 044075 658 VSIFDVETDRLTHSFKG------H---------------------------------------------STEIHS---VC 683 (786)
Q Consensus 658 I~iwD~~t~~~i~~l~~------h---------------------------------------------~~~I~s---v~ 683 (786)
|++|+..++.+++.+.. + ...+.| +.
T Consensus 214 i~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~ 293 (399)
T KOG0296|consen 214 IIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIP 293 (399)
T ss_pred EEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcc
Confidence 99999999988776641 1 001112 22
Q ss_pred EcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCe
Q 044075 684 WDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVI 761 (786)
Q Consensus 684 ~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V 761 (786)
|+..-.+.++|+-| +|.|||+...+..+.+ .|...|..+.|.+ ..+|++++.+|.|++||.+++.++ ...+|...|
T Consensus 294 ~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c-~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~I 371 (399)
T KOG0296|consen 294 SSSKLPLAACGSVDGTIAIYDLAASTLRHIC-EHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGI 371 (399)
T ss_pred cccccchhhcccccceEEEEecccchhheec-cCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchhe
Confidence 22333467788888 9999999887766555 5778899999999 789999999999999999999887 778999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 762 SALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 762 ~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.+++++|+.++++|+|.|++.+||+
T Consensus 372 l~f~ls~~~~~vvT~s~D~~a~VF~ 396 (399)
T KOG0296|consen 372 LDFALSPQKRLVVTVSDDNTALVFE 396 (399)
T ss_pred eEEEEcCCCcEEEEecCCCeEEEEe
Confidence 9999999999999999999999985
No 29
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.98 E-value=6.7e-31 Score=285.02 Aligned_cols=280 Identities=20% Similarity=0.397 Sum_probs=255.9
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s 582 (786)
+++..|+..|.|+.|+|...+++++-.+|.|.|||.++...++.+.-..-+|++..|....+.+++|+.|..|+||+..+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt 86 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNT 86 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEeccc
Confidence 35566999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC-CeeeEeecCC---eEEEEEeCC-CCEEEEEECCCe
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ-YSCARISKGG---TVQVRFQPR-LGLLLAAASENV 657 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~-~~~~~~~~~~---i~~i~~sp~-g~~Ll~gs~dg~ 657 (786)
.+ .+..|..|...|.||+.||..++++ +++.|-+|++||.+. ..+...+.++ +.+++|+|. .+.|++++-|++
T Consensus 87 ~e-kV~~FeAH~DyIR~iavHPt~P~vL-tsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrT 164 (794)
T KOG0276|consen 87 GE-KVKTFEAHSDYIRSIAVHPTLPYVL-TSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRT 164 (794)
T ss_pred ce-eeEEeeccccceeeeeecCCCCeEE-ecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeecccc
Confidence 88 4889999999999999999999777 899999999999986 4566676654 578899985 467999999999
Q ss_pred EEEEEcCCCcEEEEEecCCCCEEEEEEcCCC--CEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEE
Q 044075 658 VSIFDVETDRLTHSFKGHSTEIHSVCWDTNG--EYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMV 734 (786)
Q Consensus 658 I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg--~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~s 734 (786)
|+||.+....+..++++|...|+||+|-+.| .||++|++| +|+|||..+..|+.++.+|...|..+.|+|.-+.+++
T Consensus 165 VKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiis 244 (794)
T KOG0276|consen 165 VKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIIS 244 (794)
T ss_pred EEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEE
Confidence 9999999999999999999999999998755 599999999 9999999999999999999999999999999999999
Q ss_pred EECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 735 IGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 735 gs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~I 784 (786)
|+.||+++||+..+.+.. ++...-+.|+|++-.+.++.++.|.+.|.|.|
T Consensus 245 gsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 245 GSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred ecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence 999999999999887765 45556778999999999999999999888765
No 30
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1.6e-30 Score=287.43 Aligned_cols=279 Identities=22% Similarity=0.397 Sum_probs=255.2
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s 582 (786)
.++.+|...|.+++||.|...+++|+ .+.|+||+.++.++++++... .+.+..|.|.++++++|...|.+.|||+.+
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS 443 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGELQVFDLAS 443 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEeccc--cEEEEEecCCCceEEEeccCCceEEEEeeh
Confidence 35678999999999999988888875 678999999999999999654 899999999999999999999999999998
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC--------ee-------eEeecCCeEEEEEeCCCC
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY--------SC-------ARISKGGTVQVRFQPRLG 647 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~--------~~-------~~~~~~~i~~i~~sp~g~ 647 (786)
.. .+....+|.+.|++++..|++..++ +++.|.+|++||+.-. +. ...+...+.++.++||++
T Consensus 444 ~~-l~Eti~AHdgaIWsi~~~pD~~g~v-T~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk 521 (888)
T KOG0306|consen 444 AS-LVETIRAHDGAIWSISLSPDNKGFV-TGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGK 521 (888)
T ss_pred hh-hhhhhhccccceeeeeecCCCCceE-EecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCc
Confidence 76 4667779999999999999988776 9999999999997521 11 122347789999999999
Q ss_pred EEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEe
Q 044075 648 LLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFH 726 (786)
Q Consensus 648 ~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fs 726 (786)
+|+++--|++|+||-+++.+...++.+|.-+|.|+.++||++.+++||.| +|+||-+.-|.|-+.+..|...|.++.|.
T Consensus 522 ~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~ 601 (888)
T KOG0306|consen 522 LLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFL 601 (888)
T ss_pred EEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEc
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 727 PSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 727 pdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|....++++|.|+.|+-||-...+.+ .+.+|...|+|++.+|+|.+++|+|+|.+|++|.
T Consensus 602 P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE 662 (888)
T KOG0306|consen 602 PKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWE 662 (888)
T ss_pred ccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeee
Confidence 99999999999999999999887766 7889999999999999999999999999999995
No 31
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.97 E-value=9.7e-30 Score=255.45 Aligned_cols=262 Identities=22% Similarity=0.390 Sum_probs=232.3
Q ss_pred EeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC------
Q 044075 468 LSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF------ 541 (786)
Q Consensus 468 l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~------ 541 (786)
+....-||+.++|.. ++-..+..+.-...-|..|+|+|.|+++|+|+-|+...||++.+.
T Consensus 70 ivSaSqDGklIvWDs--------------~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~ 135 (343)
T KOG0286|consen 70 IVSASQDGKLIVWDS--------------FTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNV 135 (343)
T ss_pred EEeeccCCeEEEEEc--------------ccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccc
Confidence 344455777777752 344556666777888999999999999999999999999999854
Q ss_pred eeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEE
Q 044075 542 QTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRF 621 (786)
Q Consensus 542 ~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~i 621 (786)
...+.+.+|++.+.|+.|.+| ..|+|++.|.++.+||++++. .+..|.+|.+.|.++++.|...+.|++|+.|+..++
T Consensus 136 ~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~-~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~akl 213 (343)
T KOG0286|consen 136 RVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQ-QTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKL 213 (343)
T ss_pred eeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccce-EEEEecCCcccEEEEecCCCCCCeEEecccccceee
Confidence 455678999999999999974 579999999999999999987 588999999999999999966667779999999999
Q ss_pred EeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec--CCCCEEEEEEcCCCCEEEEEeC
Q 044075 622 WNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG--HSTEIHSVCWDTNGEYLASVSQ 696 (786)
Q Consensus 622 wDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~--h~~~I~sv~~spdg~~Lasgs~ 696 (786)
||++.+.++..+. ..|..++|.|+|.-|++|+.|++.++||++....+..+.. ....|++|+|+..|++|++|..
T Consensus 214 WD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~ 293 (343)
T KOG0286|consen 214 WDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYD 293 (343)
T ss_pred eeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeec
Confidence 9999999988876 5678899999999999999999999999999988877763 3467999999999999999999
Q ss_pred C-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEE
Q 044075 697 D-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWN 745 (786)
Q Consensus 697 D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwD 745 (786)
| ++.|||.-.++.+..+.+|++.|.++..+|||..+++|+.|..|+||.
T Consensus 294 d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 294 DFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred CCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 9 999999999999999999999999999999999999999999999994
No 32
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.97 E-value=1.2e-31 Score=273.41 Aligned_cols=263 Identities=19% Similarity=0.403 Sum_probs=231.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
....|.|+.+. ...+++|..|++|+|||.++..+...+.+|++.|.|+.|. .+.|++|+.|.+|+|||+++++ ++
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge-~l 270 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGE-PL 270 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCc-hh
Confidence 45679999986 4579999999999999999999999999999999999996 5699999999999999999988 68
Q ss_pred eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE------eecCCeEEEEEeCCCCEEEEEECCCeEEEE
Q 044075 588 QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR------ISKGGTVQVRFQPRLGLLLAAASENVVSIF 661 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~------~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iw 661 (786)
.++..|...|..+.|+ +.++++|+.|.+|.+||+.....+. -+...+..+.|+ .+++++++.|.+|++|
T Consensus 271 ~tlihHceaVLhlrf~---ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW 345 (499)
T KOG0281|consen 271 NTLIHHCEAVLHLRFS---NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVW 345 (499)
T ss_pred hHHhhhcceeEEEEEe---CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEE
Confidence 8899999999999998 4467799999999999998754322 223455556664 4599999999999999
Q ss_pred EcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCe
Q 044075 662 DVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQS 740 (786)
Q Consensus 662 D~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~ 740 (786)
++.+.+.++++.+|...|-|+.+ .++++++|+.| +|++||+..|.++..+.+|+.-|.++.|. .+.+++|+.||+
T Consensus 346 ~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~krIVSGaYDGk 421 (499)
T KOG0281|consen 346 STSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGK 421 (499)
T ss_pred eccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--Cceeeeccccce
Confidence 99999999999999999988875 68999999999 99999999999999999999999999995 558999999999
Q ss_pred EEEEECCCCeE----------EEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 741 LELWNMAENKC----------MTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 741 I~IwDl~~~~~----------~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|+|||+..+.- ..+..|.+.|..+.|. ...|++++.|.+|.|||
T Consensus 422 ikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD--~fqIvsssHddtILiWd 475 (499)
T KOG0281|consen 422 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWD 475 (499)
T ss_pred EEEEecccccCCcccccchHHHhhhhccceeEEEeec--ceEEEeccCCCeEEEEE
Confidence 99999986531 1566799999999997 55799999999999997
No 33
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=5.4e-29 Score=275.43 Aligned_cols=317 Identities=19% Similarity=0.314 Sum_probs=270.0
Q ss_pred EeccCCCCceeeeccccCCCccccc------------------ccccceeeee--EEeecCCCCeEEEEEcCCCCEEEEE
Q 044075 468 LSQDDGDGRDLFGTLKRNPSEQATE------------------TSKAFSFNEV--SSIRKSSSKVTCCHFSSDGKLLASA 527 (786)
Q Consensus 468 l~~~d~dg~~~~~~~~~~~~~~~~~------------------~~~~~~~~~v--~~l~~H~~~V~~lafSpdg~~Lasg 527 (786)
+.....||...+|.+..+|...... ....+.|... .-+......|+|++|++..+.||+|
T Consensus 204 l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvg 283 (893)
T KOG0291|consen 204 LYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVG 283 (893)
T ss_pred EEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEE
Confidence 3444557777777777554433221 1112223222 2222344889999999999999999
Q ss_pred ECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC-CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCC
Q 044075 528 GHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFD-KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKK 606 (786)
Q Consensus 528 s~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D-g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g 606 (786)
-..|...+|.+.....++.+.-....|..++|+..|..|+.|+.. |.+-||+..+..+ +....+|...+++++++|||
T Consensus 284 FssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsY-VlKQQgH~~~i~~l~YSpDg 362 (893)
T KOG0291|consen 284 FSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESY-VLKQQGHSDRITSLAYSPDG 362 (893)
T ss_pred ecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccce-eeeccccccceeeEEECCCC
Confidence 999999999999999999998888899999999999999998875 8999999998775 66678999999999999998
Q ss_pred CeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec-CCCCEEEE
Q 044075 607 NDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG-HSTEIHSV 682 (786)
Q Consensus 607 ~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~-h~~~I~sv 682 (786)
..+ ++|+.||.|++||...+-|+..+. ..++.+.|+..++.+++.+-||+|+.||+...+..++|.. ......|+
T Consensus 363 q~i-aTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~Qfscv 441 (893)
T KOG0291|consen 363 QLI-ATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCV 441 (893)
T ss_pred cEE-EeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEE
Confidence 755 599999999999999999987765 6788899999999999999999999999999999888875 34456789
Q ss_pred EEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC-eEEEEcccCC
Q 044075 683 CWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN-KCMTIAAHDC 759 (786)
Q Consensus 683 ~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~-~~~~~~~h~~ 759 (786)
+.+|.|.++++|+.| .|.||++.+|+.+..+.+|+++|.+++|+|++..|++++.|.+|++||+-.. ..+....+..
T Consensus 442 avD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~s 521 (893)
T KOG0291|consen 442 AVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRS 521 (893)
T ss_pred EEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeecc
Confidence 999999999999999 8999999999999999999999999999999999999999999999998765 3445556788
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 760 VISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 760 ~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.|.+++|+|||+-|++++-||.|.|||
T Consensus 522 dvl~vsfrPdG~elaVaTldgqItf~d 548 (893)
T KOG0291|consen 522 DVLAVSFRPDGKELAVATLDGQITFFD 548 (893)
T ss_pred ceeEEEEcCCCCeEEEEEecceEEEEE
Confidence 899999999999999999999999997
No 34
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=2.9e-30 Score=285.61 Aligned_cols=306 Identities=22% Similarity=0.398 Sum_probs=247.0
Q ss_pred eeeeccccCCCcccccccccceeeeeEEeec-CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeE
Q 044075 477 DLFGTLKRNPSEQATETSKAFSFNEVSSIRK-SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIIT 555 (786)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~ 555 (786)
..+..+.+...+..+..... +.++.++. |+++|.-++|+|.+.+|++|+.|+.|+|||+..+.+.+.+++|.+.|.
T Consensus 75 ~~L~~a~rs~llrv~~L~tg---k~irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVs 151 (775)
T KOG0319|consen 75 EVLVTASRSQLLRVWSLPTG---KLIRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVS 151 (775)
T ss_pred cEEEEeeccceEEEEEcccc---hHhHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEE
Confidence 33344444444444444433 56667777 999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCC--EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe-
Q 044075 556 DVRFRPNST--QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI- 632 (786)
Q Consensus 556 sl~fspdg~--~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~- 632 (786)
++.|+|+-+ .|++|..|++|++||+.+...++.....|.+.|++++|.+++..++ +++.|..|.+||+...+..+.
T Consensus 152 sl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~l-s~~RDkvi~vwd~~~~~~l~~l 230 (775)
T KOG0319|consen 152 SLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELL-SVGRDKVIIVWDLVQYKKLKTL 230 (775)
T ss_pred EEEeCCccchhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEE-EeccCcEEEEeehhhhhhhhee
Confidence 999999654 5899999999999999987767889999999999999999987776 888899999999853221100
Q ss_pred ----------------------------------ec------------C-------------------------------
Q 044075 633 ----------------------------------SK------------G------------------------------- 635 (786)
Q Consensus 633 ----------------------------------~~------------~------------------------------- 635 (786)
.. .
T Consensus 231 p~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~ 310 (775)
T KOG0319|consen 231 PLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDE 310 (775)
T ss_pred chhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEc
Confidence 00 0
Q ss_pred --------------CeEEEEE------------------------------------------eCCCCEEEEEECCCeEE
Q 044075 636 --------------GTVQVRF------------------------------------------QPRLGLLLAAASENVVS 659 (786)
Q Consensus 636 --------------~i~~i~~------------------------------------------sp~g~~Ll~gs~dg~I~ 659 (786)
.|..++| ..+|.+|++++.|++++
T Consensus 311 ~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svi 390 (775)
T KOG0319|consen 311 DELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVI 390 (775)
T ss_pred cccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEE
Confidence 0001110 11223566666677777
Q ss_pred EEEcCCCc----------------------------------------------------EEE----EEecCCCCEEEEE
Q 044075 660 IFDVETDR----------------------------------------------------LTH----SFKGHSTEIHSVC 683 (786)
Q Consensus 660 iwD~~t~~----------------------------------------------------~i~----~l~~h~~~I~sv~ 683 (786)
+|.++.+. .+. ....|...|+||+
T Consensus 391 lWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Va 470 (775)
T KOG0319|consen 391 LWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVA 470 (775)
T ss_pred EEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceE
Confidence 77542110 000 0124788899999
Q ss_pred EcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCe
Q 044075 684 WDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVI 761 (786)
Q Consensus 684 ~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V 761 (786)
++|+.++|++||.| +.+||++.......++.+|...|.++.|++....+++++.|++|+||.+.+..|+ ++.+|...|
T Consensus 471 ia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aV 550 (775)
T KOG0319|consen 471 IAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAV 550 (775)
T ss_pred ecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCcccee
Confidence 99999999999999 9999999999999999999999999999999999999999999999999999998 677899999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 762 SALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 762 ~slafspdg~~LaSgs~DG~I~IWd 786 (786)
..+.|-.+++.|+||+.||.|+||+
T Consensus 551 lra~F~~~~~qliS~~adGliKlWn 575 (775)
T KOG0319|consen 551 LRASFIRNGKQLISAGADGLIKLWN 575 (775)
T ss_pred EeeeeeeCCcEEEeccCCCcEEEEe
Confidence 9999999999999999999999996
No 35
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-29 Score=248.68 Aligned_cols=279 Identities=20% Similarity=0.285 Sum_probs=239.8
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCC
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKP 583 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~ 583 (786)
.+.+|..+++-|.|+.+|.+|++|+.|.++.||-..+++.+-++.+|.+.|+|+....+.+.+++|+.|.++++||++++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG 84 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG 84 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeecCCCCCeEEEEEecCCCeEEEEEc----CCCcEEEEeCCC-------CeeeEe---ecCCeEEEEEeCCCCEE
Q 044075 584 NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCD----GNSEIRFWNLSQ-------YSCARI---SKGGTVQVRFQPRLGLL 649 (786)
Q Consensus 584 ~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs----~Dg~I~iwDl~~-------~~~~~~---~~~~i~~i~~sp~g~~L 649 (786)
+. +..+. ...+|..+.|++.++.++++.+ ..+.|.++|++. .++... ....++.+.|.|-+.+|
T Consensus 85 k~-la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~i 162 (327)
T KOG0643|consen 85 KQ-LATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETI 162 (327)
T ss_pred cE-EEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEE
Confidence 84 44443 4578999999999998876653 347899999983 332222 23677888999999999
Q ss_pred EEEECCCeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeC
Q 044075 650 LAAASENVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHP 727 (786)
Q Consensus 650 l~gs~dg~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fsp 727 (786)
++|..+|.|.+||++++ +.+.+...|...|+.+++++|..++++++.| +-++||+++-++++++.. ..+|.+.+++|
T Consensus 163 i~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t-e~PvN~aaisP 241 (327)
T KOG0643|consen 163 IAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT-ERPVNTAAISP 241 (327)
T ss_pred EEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeee-cccccceeccc
Confidence 99999999999999998 5566667799999999999999999999999 999999999999999975 58999999999
Q ss_pred CCCEEEEEECCCeEEE--EECCCCe-------------EEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 728 SYPTLMVIGGYQSLEL--WNMAENK-------------CMTIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 728 dg~~L~sgs~dg~I~I--wDl~~~~-------------~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
-...++.|+.-...-| =+.+.++ .-.+.+|-++|++|+|+|+|+..+||++||.|+|.
T Consensus 242 ~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h 314 (327)
T KOG0643|consen 242 LLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLH 314 (327)
T ss_pred ccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEE
Confidence 9888888876543222 2233332 12678999999999999999999999999999984
No 36
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=3.4e-29 Score=244.57 Aligned_cols=279 Identities=19% Similarity=0.351 Sum_probs=240.7
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
+..+.+..|.++|..+.|+-||+|.++++.|.+|++|+...+.+++++.+|...|.+++.+.|+..|++|+.|+.|.+||
T Consensus 8 kr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwD 87 (307)
T KOG0316|consen 8 KRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWD 87 (307)
T ss_pred hhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEE
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe--eeEee---cCCeEEEEEeCCCCEEEEEEC
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS--CARIS---KGGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~--~~~~~---~~~i~~i~~sp~g~~Ll~gs~ 654 (786)
+.+++ ..+.+.+|...|+.+.|+.+. .++++++-|.++++||.++.. ++.++ +..+.++.+. +..+++|+.
T Consensus 88 V~TGk-v~Rr~rgH~aqVNtV~fNees-SVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~ 163 (307)
T KOG0316|consen 88 VNTGK-VDRRFRGHLAQVNTVRFNEES-SVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSV 163 (307)
T ss_pred cccCe-eeeecccccceeeEEEecCcc-eEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeecc
Confidence 99988 689999999999999999665 466799999999999998643 44443 3566666664 457999999
Q ss_pred CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCce--EEEEEeCCCCE
Q 044075 655 ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKF--HSCIFHPSYPT 731 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I--~sv~fspdg~~ 731 (786)
||+++.||++.+.....+- ..+|+|++|+++++..++++-| ++++.|-.+|+.+..+++|.+.- ..+++......
T Consensus 164 DGtvRtydiR~G~l~sDy~--g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdth 241 (307)
T KOG0316|consen 164 DGTVRTYDIRKGTLSSDYF--GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTH 241 (307)
T ss_pred CCcEEEEEeecceeehhhc--CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeeccccee
Confidence 9999999999998766554 5679999999999999999999 99999999999999999986643 45677778889
Q ss_pred EEEEECCCeEEEEECCCCeEEEE-cccCCC-eEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 732 LMVIGGYQSLELWNMAENKCMTI-AAHDCV-ISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 732 L~sgs~dg~I~IwDl~~~~~~~~-~~h~~~-V~slafspdg~~LaSgs~DG~I~IW 785 (786)
+++|+.||.|++||+.+...+.. ..|... |.+++++|.-..|+++.. +.+.+|
T Consensus 242 V~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~-~~~~~~ 296 (307)
T KOG0316|consen 242 VFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG-HGDLFW 296 (307)
T ss_pred EEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC-Cceece
Confidence 99999999999999999888754 445555 789999998887777753 445555
No 37
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.97 E-value=4.4e-30 Score=252.54 Aligned_cols=278 Identities=21% Similarity=0.294 Sum_probs=251.3
Q ss_pred EeecCCCCeEEEEEcC---CCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcC
Q 044075 504 SIRKSSSKVTCCHFSS---DGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 504 ~l~~H~~~V~~lafSp---dg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl 580 (786)
+..+|+.+|..++||| +|-+|++++.|+.-.+-+-+++.-+-++.+|.+.|++.+++.+...-++++.|-+-+|||.
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a 88 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDA 88 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhh
Confidence 5678999999999987 8999999999999999999999999999999999999999999888999999999999999
Q ss_pred CCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee----eEeecCCeEEEEEeCCCCEEEEEECCC
Q 044075 581 AKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC----ARISKGGTVQVRFQPRLGLLLAAASEN 656 (786)
Q Consensus 581 ~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~----~~~~~~~i~~i~~sp~g~~Ll~gs~dg 656 (786)
-++.. +..+ .|..-|..++|+.+.++|+ +|+.+..+++||++..+. +.-+.+.|..+.|......|++.+.|+
T Consensus 89 ~tgde-lhsf-~hkhivk~~af~~ds~~ll-tgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~ 165 (334)
T KOG0278|consen 89 VTGDE-LHSF-EHKHIVKAVAFSQDSNYLL-TGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDK 165 (334)
T ss_pred hhhhh-hhhh-hhhheeeeEEecccchhhh-ccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCC
Confidence 98873 4444 4888899999999988777 999999999999987542 344568889999999999999999999
Q ss_pred eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEE
Q 044075 657 VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 657 ~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
+|++||.++++.+.++. ...+|+++.++++|++|.++....|++||..+...++.++.. ..|.+...+|+...+++|+
T Consensus 166 tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P-~nV~SASL~P~k~~fVaGg 243 (334)
T KOG0278|consen 166 TVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMP-CNVESASLHPKKEFFVAGG 243 (334)
T ss_pred ceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCc-cccccccccCCCceEEecC
Confidence 99999999999999998 678899999999999998888779999999999999888654 7789999999999999999
Q ss_pred CCCeEEEEECCCCeEEEE--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 737 GYQSLELWNMAENKCMTI--AAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 737 ~dg~I~IwDl~~~~~~~~--~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.|..++.||..++..+.. .+|.++|.||.|+|||...++|+.||+|+||.
T Consensus 244 ed~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQ 295 (334)
T KOG0278|consen 244 EDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQ 295 (334)
T ss_pred cceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEE
Confidence 999999999999987743 79999999999999999999999999999993
No 38
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=2.9e-29 Score=258.40 Aligned_cols=246 Identities=23% Similarity=0.470 Sum_probs=226.5
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC-CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN-FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t-~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
.+....+++|++.|..|+|+..|++||+++.|=.+++||..+ .++++.+.+|+..|.+++|-|.|.+|++++.|.+|+.
T Consensus 140 g~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~ 219 (406)
T KOG0295|consen 140 GELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKA 219 (406)
T ss_pred hhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeE
Confidence 345778999999999999999999999999999999999987 6788888999999999999999999999999999999
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee---eEeecCCeEEEEEeCC---------
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC---ARISKGGTVQVRFQPR--------- 645 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~---~~~~~~~i~~i~~sp~--------- 645 (786)
|++.++. ++..+.+|...|..+..+.||. |+++|+.|.+|++|-+.++.+ .+.+...+.+++|.|.
T Consensus 220 We~~tg~-cv~t~~~h~ewvr~v~v~~DGt-i~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~a 297 (406)
T KOG0295|consen 220 WECDTGY-CVKTFPGHSEWVRMVRVNQDGT-IIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEA 297 (406)
T ss_pred Eecccce-eEEeccCchHhEEEEEecCCee-EEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhc
Confidence 9999976 8999999999999999997765 778999999999999999854 4556677778887653
Q ss_pred ------CCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCC
Q 044075 646 ------LGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGN 718 (786)
Q Consensus 646 ------g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~ 718 (786)
+.++.+++.|++|++||+.++.++.++.+|..+|..++|+|.|+||+++.+| +++|||+++..|.+++..|..
T Consensus 298 t~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~h 377 (406)
T KOG0295|consen 298 TGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEH 377 (406)
T ss_pred cCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcc
Confidence 2478999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred ceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 044075 719 KFHSCIFHPSYPTLMVIGGYQSLELWNM 746 (786)
Q Consensus 719 ~I~sv~fspdg~~L~sgs~dg~I~IwDl 746 (786)
-++++.|+.+..++++|+-|..+++|..
T Consensus 378 fvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 378 FVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred eeEEEecCCCCceEEeccccceeeeeec
Confidence 9999999999999999999999999964
No 39
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.97 E-value=1.5e-28 Score=243.50 Aligned_cols=280 Identities=20% Similarity=0.299 Sum_probs=247.1
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee--ecCCCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEc
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC--TPDDHNHIITDVRFRP-NSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~--~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWd 579 (786)
+.+++|..+|.+++|+.+|..|++|+.|+++.||+++..+... ...+|.+.|-.++|+| ....|++++.|.+|++||
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD 93 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence 5678899999999999999999999999999999998765443 3478999999999998 567899999999999999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee--cCCeEEEEEeCCCCEEEEEECCCe
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS--KGGTVQVRFQPRLGLLLAAASENV 657 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~--~~~i~~i~~sp~g~~Ll~gs~dg~ 657 (786)
++..+. ....... ..=.-+.|+|+|.+++ .++.|..|.+.|.++.+..... +..+..++|+.++..|+.....|.
T Consensus 94 ~r~~k~-~~~i~~~-~eni~i~wsp~g~~~~-~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~ 170 (313)
T KOG1407|consen 94 IRSGKC-TARIETK-GENINITWSPDGEYIA-VGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGC 170 (313)
T ss_pred eccCcE-EEEeecc-CcceEEEEcCCCCEEE-EecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCce
Confidence 999884 4333322 3334678999998776 7888999999999988776544 466788999988888888888899
Q ss_pred EEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEE
Q 044075 658 VSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 658 I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
|.|......+++..++.|.....||.|+|+|+||++|+.| .+.+||+..--|++.+..++-+|..+.|+.+|++|++++
T Consensus 171 v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaS 250 (313)
T KOG1407|consen 171 VEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASAS 250 (313)
T ss_pred EEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccC
Confidence 9999999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred CCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCC---------CcEEEe
Q 044075 737 GYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHD---------KSVKIW 785 (786)
Q Consensus 737 ~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~D---------G~I~IW 785 (786)
.|..|-|-++.+|..+....+.++...|+|+|...+||-+++| |.|+||
T Consensus 251 EDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiF 308 (313)
T KOG1407|consen 251 EDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIF 308 (313)
T ss_pred ccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEEecCCCCccccccceeEEe
Confidence 9999999999999999888999999999999999999988776 567765
No 40
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1e-28 Score=276.26 Aligned_cols=278 Identities=20% Similarity=0.407 Sum_probs=247.2
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc
Q 044075 505 IRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN 584 (786)
Q Consensus 505 l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~ 584 (786)
+...+..|..++|+|...+++++-..|.|.+||..-+.++..|..|.++|..|+|+|...+|++|+.|-.|+||+..+.+
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rr 84 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRR 84 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccce
Confidence 44567789999999999999999999999999999999999999999999999999999999999999999999998866
Q ss_pred ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC---eEEEEEeCCCCEEEEEECCCeEEEE
Q 044075 585 FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG---TVQVRFQPRLGLLLAAASENVVSIF 661 (786)
Q Consensus 585 ~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~---i~~i~~sp~g~~Ll~gs~dg~I~iw 661 (786)
|+.++.+|-..|..+.||+.-..++ +++.|-+|+||+..+.+++.+..++ +.|..|+|....+++++-|-+|+||
T Consensus 85 -clftL~GHlDYVRt~~FHheyPWIl-SASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVW 162 (1202)
T KOG0292|consen 85 -CLFTLLGHLDYVRTVFFHHEYPWIL-SASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVW 162 (1202)
T ss_pred -ehhhhccccceeEEeeccCCCceEE-EccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEE
Confidence 7889999999999999999988777 9999999999999999999888765 5677899999999999999999999
Q ss_pred EcCCCc-----------------------------EEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe--e
Q 044075 662 DVETDR-----------------------------LTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE--C 709 (786)
Q Consensus 662 D~~t~~-----------------------------~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~--~ 709 (786)
|+...+ ..+.+.+|...|+-++|+|.-.+|++|++| .|++|.+...+ .
T Consensus 163 DisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWE 242 (1202)
T KOG0292|consen 163 DISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 242 (1202)
T ss_pred eecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecccccee
Confidence 985211 124567899999999999999999999999 99999987654 5
Q ss_pred EEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 710 IHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 710 i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
+.+..+|.+.|.++.|+|....|++.+.|++|+|||+...+.+ ++....+..+.++.+|..++++.|- |+-+.||
T Consensus 243 vDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAgH-DsGm~VF 318 (1202)
T KOG0292|consen 243 VDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAGH-DSGMIVF 318 (1202)
T ss_pred ehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeeec-CCceEEE
Confidence 6678899999999999999999999999999999999988877 4555677899999999999887665 5555554
No 41
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.96 E-value=8.6e-30 Score=265.44 Aligned_cols=251 Identities=25% Similarity=0.461 Sum_probs=218.2
Q ss_pred ccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCc
Q 044075 495 KAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKT 574 (786)
Q Consensus 495 ~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~ 574 (786)
+...|..-..+..|.+.|+++.|+++|.++++|+.+|.|++|+..-.........|...|++++|+|++..|++|+.||+
T Consensus 124 Ng~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ 203 (464)
T KOG0284|consen 124 NGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGT 203 (464)
T ss_pred cCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCCe
Confidence 34455555567889999999999999999999999999999997654443344455599999999999999999999999
Q ss_pred EEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe---ecCCeEEEEEeCCCCEEEE
Q 044075 575 VRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI---SKGGTVQVRFQPRLGLLLA 651 (786)
Q Consensus 575 I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~---~~~~i~~i~~sp~g~~Ll~ 651 (786)
|+|||....+ ....+.+|.-.|.|++|||... ++++++.|..|++||.+++.|+.. ++..|..+.|++++++|++
T Consensus 204 ikiWdf~~~k-ee~vL~GHgwdVksvdWHP~kg-LiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt 281 (464)
T KOG0284|consen 204 IKIWDFRMPK-EERVLRGHGWDVKSVDWHPTKG-LIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLT 281 (464)
T ss_pred EEEEeccCCc-hhheeccCCCCcceeccCCccc-eeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEE
Confidence 9999998876 3567799999999999999866 666999999999999999998765 4567888999999999999
Q ss_pred EECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcC-CCCEEEEEeCC-eEEEEECCCCeeEEEE-ccCCCceEEEEEeCC
Q 044075 652 AASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDT-NGEYLASVSQD-SVRVWSLASGECIHEL-SSSGNKFHSCIFHPS 728 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~sp-dg~~Lasgs~D-~I~vwDl~s~~~i~~l-~~~~~~I~sv~fspd 728 (786)
++.|..+++||+++.+.+..+++|...|+++.|+| ...+|.+|+.| .|..|.+...+++..+ ..|...|++++|+|-
T Consensus 282 ~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPl 361 (464)
T KOG0284|consen 282 GSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPL 361 (464)
T ss_pred ccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcccccceeeeecccc
Confidence 99999999999999999999999999999999999 45678888888 9999999855555444 468899999999999
Q ss_pred CCEEEEEECCCeEEEEECC
Q 044075 729 YPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 729 g~~L~sgs~dg~I~IwDl~ 747 (786)
|..|++|+.|.++++|.-.
T Consensus 362 Ghil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 362 GHILATGSNDRTVRFWTRN 380 (464)
T ss_pred ceeEeecCCCcceeeeccC
Confidence 9999999999999999643
No 42
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.96 E-value=6e-29 Score=255.04 Aligned_cols=242 Identities=21% Similarity=0.441 Sum_probs=223.5
Q ss_pred CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEE
Q 044075 541 FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIR 620 (786)
Q Consensus 541 ~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~ 620 (786)
.+..+.+.+|.+.|.||++.|.+.+|++|+.|++|+|||+.++. +..++.+|...|..+++++...++| +|+.|+.|+
T Consensus 141 wKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~-LkltltGhi~~vr~vavS~rHpYlF-s~gedk~VK 218 (460)
T KOG0285|consen 141 WKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ-LKLTLTGHIETVRGVAVSKRHPYLF-SAGEDKQVK 218 (460)
T ss_pred ceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe-EEEeecchhheeeeeeecccCceEE-EecCCCeeE
Confidence 45667889999999999999999999999999999999999987 6788999999999999999888877 899999999
Q ss_pred EEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC
Q 044075 621 FWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD 697 (786)
Q Consensus 621 iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D 697 (786)
.||++..+.++... ..+.+++.+|.-+.|++++.|.+++|||+++...+..+.+|..+|.+|.+.|-...+++||.|
T Consensus 219 CwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D 298 (460)
T KOG0285|consen 219 CWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHD 298 (460)
T ss_pred EEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCC
Confidence 99999999888766 457888999999999999999999999999999999999999999999999988889999999
Q ss_pred -eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEE
Q 044075 698 -SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVAS 775 (786)
Q Consensus 698 -~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaS 775 (786)
+|++||++.++...++..|...|.+++.+|....+++++.| .|+-|++..+..+ .+.+|...|.+++...|+ ++++
T Consensus 299 ~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~-v~~~ 376 (460)
T KOG0285|consen 299 STVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-VLVS 376 (460)
T ss_pred ceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCc-eEEE
Confidence 99999999999999999999999999999998888887777 6999999998876 577999999999988776 8889
Q ss_pred EeCCCcEEEeC
Q 044075 776 ASHDKSVKIWK 786 (786)
Q Consensus 776 gs~DG~I~IWd 786 (786)
|++.|.|.+||
T Consensus 377 G~dng~~~fwd 387 (460)
T KOG0285|consen 377 GGDNGSIMFWD 387 (460)
T ss_pred cCCceEEEEEe
Confidence 99999999997
No 43
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.96 E-value=1.7e-28 Score=247.46 Aligned_cols=285 Identities=23% Similarity=0.434 Sum_probs=241.9
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC------------------CeeeeecCCCCCCeEEEEEcc
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN------------------FQTECTPDDHNHIITDVRFRP 561 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t------------------~~~~~~l~~h~~~V~sl~fsp 561 (786)
-+...+..|+.++.|-+|++||.++|+|+.|..|+|.|++. --.++++..|.+.|+++.|+|
T Consensus 103 yEt~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHP 182 (430)
T KOG0640|consen 103 YETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHP 182 (430)
T ss_pred cceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecc
Confidence 35567788999999999999999999999999999999871 135677889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCcceee--eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe------e
Q 044075 562 NSTQLATSSFDKTVRIWDAAKPNFCLQ--TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI------S 633 (786)
Q Consensus 562 dg~~Lasgs~Dg~I~VWdl~s~~~~~~--~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~------~ 633 (786)
...+|++|+.|++|++||+..... .+ .......+|.+|.|+|.|.+++ .|...-++++||+++..|... +
T Consensus 183 re~ILiS~srD~tvKlFDfsK~sa-KrA~K~~qd~~~vrsiSfHPsGefll-vgTdHp~~rlYdv~T~QcfvsanPd~qh 260 (430)
T KOG0640|consen 183 RETILISGSRDNTVKLFDFSKTSA-KRAFKVFQDTEPVRSISFHPSGEFLL-VGTDHPTLRLYDVNTYQCFVSANPDDQH 260 (430)
T ss_pred hhheEEeccCCCeEEEEecccHHH-HHHHHHhhccceeeeEeecCCCceEE-EecCCCceeEEeccceeEeeecCccccc
Confidence 999999999999999999976441 11 1223457899999999999777 777788999999999887654 3
Q ss_pred cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec-C-CCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeE
Q 044075 634 KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG-H-STEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECI 710 (786)
Q Consensus 634 ~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~-h-~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i 710 (786)
.+.++++.+++.++..++++.||.|++||--+++++.++.. | ...|.+..|..+++||++.+.| .|++|.+.+++++
T Consensus 261 t~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l 340 (430)
T KOG0640|consen 261 TGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRML 340 (430)
T ss_pred ccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceE
Confidence 47899999999999999999999999999999999988864 5 4579999999999999999999 9999999999999
Q ss_pred EEEccCCC-----ceEEEEEeCCCCEEEEEEC-CCeEEEEECCCCeEE--EEcccCCCeEEEEEcCCCCEEEEEeCCCcE
Q 044075 711 HELSSSGN-----KFHSCIFHPSYPTLMVIGG-YQSLELWNMAENKCM--TIAAHDCVISALAQSPVTGMVASASHDKSV 782 (786)
Q Consensus 711 ~~l~~~~~-----~I~sv~fspdg~~L~sgs~-dg~I~IwDl~~~~~~--~~~~h~~~V~slafspdg~~LaSgs~DG~I 782 (786)
.++.+.+. --+...|.....|++.-.. .+.+.-||.++...+ ...+|.+.+..+.-+|.+.-+++|+.|-.+
T Consensus 341 ~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~ra 420 (430)
T KOG0640|consen 341 KEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRA 420 (430)
T ss_pred EEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeeccccee
Confidence 99876521 1234567777777777654 358999999987765 445899999999999999999999999999
Q ss_pred EEeC
Q 044075 783 KIWK 786 (786)
Q Consensus 783 ~IWd 786 (786)
|+|.
T Consensus 421 RFWy 424 (430)
T KOG0640|consen 421 RFWY 424 (430)
T ss_pred eeee
Confidence 9993
No 44
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=3.5e-27 Score=240.38 Aligned_cols=283 Identities=20% Similarity=0.335 Sum_probs=243.7
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeC--CCcEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSF--DKTVR 576 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~--Dg~I~ 576 (786)
|++.+.++.-.+.|+++.|+++|.+|++++.|..|+|||..+++.++++..+...|..++|....+.++.++. |.+||
T Consensus 4 ~~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIr 83 (311)
T KOG1446|consen 4 FRPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIR 83 (311)
T ss_pred cccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceE
Confidence 4455566667889999999999999999999999999999999999999999999999999988877887776 88999
Q ss_pred EEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-CCeEEEEEeCCCCEEEEEECC
Q 044075 577 IWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-GGTVQVRFQPRLGLLLAAASE 655 (786)
Q Consensus 577 VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-~~i~~i~~sp~g~~Ll~gs~d 655 (786)
..++.+.+ .++.+.+|...|.+|+.+|-++ .|++++.|++|++||++..++..... .....++|.|.|-.++++...
T Consensus 84 yLsl~dNk-ylRYF~GH~~~V~sL~~sP~~d-~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~ 161 (311)
T KOG1446|consen 84 YLSLHDNK-YLRYFPGHKKRVNSLSVSPKDD-TFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGS 161 (311)
T ss_pred EEEeecCc-eEEEcCCCCceEEEEEecCCCC-eEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCC
Confidence 99999987 5999999999999999999885 55599999999999999888876665 455678899999999999888
Q ss_pred CeEEEEEcCCC--cEEEEEe---cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCce---EEEEEe
Q 044075 656 NVVSIFDVETD--RLTHSFK---GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKF---HSCIFH 726 (786)
Q Consensus 656 g~I~iwD~~t~--~~i~~l~---~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I---~sv~fs 726 (786)
..|++||++.- .+..++. +.....+.|.|+|||++|+.+... .+++.|.-+|..+.++..+...- ....|.
T Consensus 162 ~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ft 241 (311)
T KOG1446|consen 162 ELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFT 241 (311)
T ss_pred CeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEEC
Confidence 89999999975 3333333 346778999999999999999888 89999999999988887764433 678899
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEE-EEcc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 727 PSYPTLMVIGGYQSLELWNMAENKCM-TIAA-HDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 727 pdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~-h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
|+++++++|+.||+|.+|+++++..+ .+.+ +..++.++.|.|...+++|++. .+.+|
T Consensus 242 Pds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s--~l~fw 300 (311)
T KOG1446|consen 242 PDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASS--NLVFW 300 (311)
T ss_pred CCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecCc--eEEEE
Confidence 99999999999999999999998877 4445 7899999999998888877754 57776
No 45
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.96 E-value=1.7e-27 Score=252.80 Aligned_cols=276 Identities=18% Similarity=0.278 Sum_probs=234.7
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC---eeeeecC--CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF---QTECTPD--DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~---~~~~~l~--~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
.|..-|.++.+|...++++||+ .|.|+|||+... ..+..+. .....|.++.+.|||+.|++|++-.+|.|||+.
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLA 495 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLA 495 (705)
T ss_pred ccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeecc
Confidence 5889999999999999999997 688999999742 2333332 345789999999999999999999999999998
Q ss_pred CCcceee-eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCe
Q 044075 582 KPNFCLQ-TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENV 657 (786)
Q Consensus 582 s~~~~~~-~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~ 657 (786)
.....++ .+....-.+..++.+||.+.+| +|..||.|.|||+.+...++.+. .+..||.++++|..|.+|+-|++
T Consensus 496 apTprikaeltssapaCyALa~spDakvcF-sccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDnt 574 (705)
T KOG0639|consen 496 APTPRIKAELTSSAPACYALAISPDAKVCF-SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNT 574 (705)
T ss_pred CCCcchhhhcCCcchhhhhhhcCCccceee-eeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccc
Confidence 7663332 2333334678899999988666 77779999999999999988877 56789999999999999999999
Q ss_pred EEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEE
Q 044075 658 VSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 658 I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
|+.||++.++.+.... ..+.|.++.++|.+++|++|-++ .+.|......+ ...+..|+..|.++.|.+.|+++++.+
T Consensus 575 vRcWDlregrqlqqhd-F~SQIfSLg~cP~~dWlavGMens~vevlh~skp~-kyqlhlheScVLSlKFa~cGkwfvStG 652 (705)
T KOG0639|consen 575 VRCWDLREGRQLQQHD-FSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE-KYQLHLHESCVLSLKFAYCGKWFVSTG 652 (705)
T ss_pred eeehhhhhhhhhhhhh-hhhhheecccCCCccceeeecccCcEEEEecCCcc-ceeecccccEEEEEEecccCceeeecC
Confidence 9999999987665544 56889999999999999999998 88888765443 446677899999999999999999999
Q ss_pred CCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 737 GYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 737 ~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.|+-+..|...-+..+.-....+.|.++.++.|+++|+||+.|+...||.
T Consensus 653 kDnlLnawrtPyGasiFqskE~SsVlsCDIS~ddkyIVTGSGdkkATVYe 702 (705)
T KOG0639|consen 653 KDNLLNAWRTPYGASIFQSKESSSVLSCDISFDDKYIVTGSGDKKATVYE 702 (705)
T ss_pred chhhhhhccCccccceeeccccCcceeeeeccCceEEEecCCCcceEEEE
Confidence 99999999999988887777888999999999999999999998888773
No 46
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.96 E-value=3.2e-29 Score=261.60 Aligned_cols=279 Identities=20% Similarity=0.355 Sum_probs=243.4
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe--eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcC
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ--TECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~--~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl 580 (786)
..+..|.+.|..+.|-++...|++|+.|..|++|++...+ .+.++.+..+.|+++.|.+++.++++++.|+.+++|++
T Consensus 169 ~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnv 248 (459)
T KOG0288|consen 169 FVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNV 248 (459)
T ss_pred hhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeec
Confidence 3566799999999999998999999999999999987655 67788888899999999999999999999999999999
Q ss_pred CCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC--eEEEEEeCCCCEEEEEECCCeE
Q 044075 581 AKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG--TVQVRFQPRLGLLLAAASENVV 658 (786)
Q Consensus 581 ~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~--i~~i~~sp~g~~Ll~gs~dg~I 658 (786)
.... ...++.+|.+.|+++.|...... +++++.|.+|++||+....|.+..... +..|+.+ ...++++..|+.|
T Consensus 249 d~~r-~~~TLsGHtdkVt~ak~~~~~~~-vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~--~~~~~SgH~Dkkv 324 (459)
T KOG0288|consen 249 DSLR-LRHTLSGHTDKVTAAKFKLSHSR-VVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCS--ISDVISGHFDKKV 324 (459)
T ss_pred cchh-hhhhhcccccceeeehhhccccc-eeeccccchhhhhhhhhhheeccccccccccceEec--ceeeeecccccce
Confidence 9876 58889999999999999865554 669999999999999998887765533 3344444 5678889999999
Q ss_pred EEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC----CCceEEEEEeCCCCEEE
Q 044075 659 SIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS----GNKFHSCIFHPSYPTLM 733 (786)
Q Consensus 659 ~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~----~~~I~sv~fspdg~~L~ 733 (786)
++||+++..++.....+. .|+++..++++..|.+++.| ++.++|+++.+....+... ...++.+.|+|++.|++
T Consensus 325 RfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~Yva 403 (459)
T KOG0288|consen 325 RFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVA 403 (459)
T ss_pred EEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceee
Confidence 999999999999998665 89999999999999999988 9999999999888877654 23478899999999999
Q ss_pred EEECCCeEEEEECCCCeEEEE-cc-c-CCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 734 VIGGYQSLELWNMAENKCMTI-AA-H-DCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 734 sgs~dg~I~IwDl~~~~~~~~-~~-h-~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+|+.||.|+||++.++++... .. + ...|++++|+|.|..|++++.++.+++|.
T Consensus 404 AGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 404 AGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred eccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 999999999999999998733 22 2 23699999999999999999999999994
No 47
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=8.2e-28 Score=261.17 Aligned_cols=274 Identities=20% Similarity=0.301 Sum_probs=239.9
Q ss_pred cccccCCC-cceeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEE
Q 044075 456 DIGSLDDN-VESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVV 534 (786)
Q Consensus 456 ~v~sld~~-~~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~ 534 (786)
.|.+.|.+ .+.++...-..|...++... +-..++++.-..-+|.++.|-...+++++|+.|..|+
T Consensus 15 RVKsVd~HPtePw~la~LynG~V~IWnye--------------tqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~Ir 80 (794)
T KOG0276|consen 15 RVKSVDFHPTEPWILAALYNGDVQIWNYE--------------TQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIR 80 (794)
T ss_pred ceeeeecCCCCceEEEeeecCeeEEEecc--------------cceeeeeeeecccchhhheeeeccceEEEecCCceEE
Confidence 44445544 23444444445556555433 2346777777888999999999999999999999999
Q ss_pred EEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEc
Q 044075 535 VWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCD 614 (786)
Q Consensus 535 IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs 614 (786)
||+.++++.++.+..|.+.|+||+.+|...++++++.|-+|++||.+..-.+..++.+|...|.+++|+|.+..-|++|+
T Consensus 81 Vfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~s 160 (794)
T KOG0276|consen 81 VFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASAS 160 (794)
T ss_pred EEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeee
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred CCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCC--CEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCC
Q 044075 615 GNSEIRFWNLSQYSCARISK---GGTVQVRFQPRL--GLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGE 689 (786)
Q Consensus 615 ~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g--~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~ 689 (786)
-|++|++|.+....+...++ .++.++++-+.| .+|++|+.|.+|+|||..+..++.++.+|...|..++|+|.-.
T Consensus 161 LDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lp 240 (794)
T KOG0276|consen 161 LDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELP 240 (794)
T ss_pred ccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCc
Confidence 99999999998877655544 678899987654 5899999999999999999999999999999999999999999
Q ss_pred EEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEE
Q 044075 690 YLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLEL 743 (786)
Q Consensus 690 ~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~I 743 (786)
+|++|++| +++||+..+.+...++.-....+++++-.+.+..+++|...|.|.+
T Consensus 241 iiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 241 IIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred EEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence 99999999 9999999999888888888899999999998888888887776544
No 48
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=8.2e-28 Score=273.98 Aligned_cols=246 Identities=28% Similarity=0.505 Sum_probs=221.5
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEc-CCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNM-ENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl-~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
.....+.+|...|.+++|+||++++++++.|++|+|||+ ..+..++++.+|...|++++|+|+++++++|+.|++|+||
T Consensus 194 ~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriW 273 (456)
T KOG0266|consen 194 NLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIW 273 (456)
T ss_pred hhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEE
Confidence 356667899999999999999999999999999999999 5668999999999999999999999999999999999999
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe--eeEeec----C-CeEEEEEeCCCCEEEE
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS--CARISK----G-GTVQVRFQPRLGLLLA 651 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~--~~~~~~----~-~i~~i~~sp~g~~Ll~ 651 (786)
|+++++ +...+.+|...|++++|++++..++ +++.|+.|++||+.++. +..... . .+..+.|+|++.++++
T Consensus 274 d~~~~~-~~~~l~~hs~~is~~~f~~d~~~l~-s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~ 351 (456)
T KOG0266|consen 274 DVRTGE-CVRKLKGHSDGISGLAFSPDGNLLV-SASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLS 351 (456)
T ss_pred eccCCe-EEEeeeccCCceEEEEECCCCCEEE-EcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEE
Confidence 999965 7999999999999999999988776 66889999999999988 333332 2 4688999999999999
Q ss_pred EECCCeEEEEEcCCCcEEEEEecCCCC---EEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC-CCceEEEEEe
Q 044075 652 AASENVVSIFDVETDRLTHSFKGHSTE---IHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS-GNKFHSCIFH 726 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~l~~h~~~---I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~-~~~I~sv~fs 726 (786)
++.|+.+++||+..+..+..+.+|... +.+...++.+.++++++.| .|++||+.++..+..+.+| ...+..+.++
T Consensus 352 ~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~ 431 (456)
T KOG0266|consen 352 ASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSH 431 (456)
T ss_pred ecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccC
Confidence 999999999999999999999988775 3444557799999999999 9999999999999999999 8899999999
Q ss_pred CCCCEEEEEE--CCCeEEEEECC
Q 044075 727 PSYPTLMVIG--GYQSLELWNMA 747 (786)
Q Consensus 727 pdg~~L~sgs--~dg~I~IwDl~ 747 (786)
+..+++++.+ .|+.|++|...
T Consensus 432 ~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 432 PTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred CCcCeeeecCcCCCceEEEecCC
Confidence 9999999998 68899999754
No 49
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.96 E-value=6.9e-27 Score=243.43 Aligned_cols=243 Identities=29% Similarity=0.566 Sum_probs=217.8
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcC
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl 580 (786)
....+..|...|.++.|++++++|++++.||.|++|++.+.+.+..+..|...|.++.|++++.++++++.|+.|++||+
T Consensus 43 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~ 122 (289)
T cd00200 43 LLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDV 122 (289)
T ss_pred cEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEEC
Confidence 45567789999999999999999999999999999999998888888999999999999999888888888999999999
Q ss_pred CCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCe
Q 044075 581 AKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENV 657 (786)
Q Consensus 581 ~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~ 657 (786)
.+.+ ....+..|...|.+++|+|++. ++++++.|+.|++||++..+....+. ..+.++.|++++..+++++.++.
T Consensus 123 ~~~~-~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 200 (289)
T cd00200 123 ETGK-CLTTLRGHTDWVNSVAFSPDGT-FVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGT 200 (289)
T ss_pred CCcE-EEEEeccCCCcEEEEEEcCcCC-EEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCc
Confidence 8765 4666778999999999999855 55577779999999998776655443 46789999999999999999999
Q ss_pred EEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEE
Q 044075 658 VSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 658 I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
|++||+++++.+..+..|...|.+++|++++.++++++.+ .|++||+.+++.+..+..|...|.++.|++++.+|++++
T Consensus 201 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 280 (289)
T cd00200 201 IKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGS 280 (289)
T ss_pred EEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEec
Confidence 9999999999998887899999999999999999988866 999999999999999988889999999999999999999
Q ss_pred CCCeEEEEE
Q 044075 737 GYQSLELWN 745 (786)
Q Consensus 737 ~dg~I~IwD 745 (786)
.|+.|++|+
T Consensus 281 ~d~~i~iw~ 289 (289)
T cd00200 281 ADGTIRIWD 289 (289)
T ss_pred CCCeEEecC
Confidence 999999996
No 50
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=6.2e-29 Score=251.46 Aligned_cols=276 Identities=24% Similarity=0.400 Sum_probs=242.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec--------CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP--------DDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l--------~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
..+.+.|..|||||.+|++|+.||-|.|||..+++..+.+ --+..+|.|++|+.|...|++|+.||.|+||.
T Consensus 212 ~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWr 291 (508)
T KOG0275|consen 212 QKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWR 291 (508)
T ss_pred cccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEE
Confidence 4556889999999999999999999999999998876654 34788999999999999999999999999999
Q ss_pred CCCCcceeeeec-CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC---eEEEEEeCCCCEEEEEECC
Q 044075 580 AAKPNFCLQTYT-GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG---TVQVRFQPRLGLLLAAASE 655 (786)
Q Consensus 580 l~s~~~~~~~~~-~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~---i~~i~~sp~g~~Ll~gs~d 655 (786)
+.++. |++.|. .|...|+|+.|+.++..++ +++.|.++++.-+.++++++.++++ +....|.++|.++++++.|
T Consensus 292 i~tG~-ClRrFdrAHtkGvt~l~FSrD~SqiL-S~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsD 369 (508)
T KOG0275|consen 292 IETGQ-CLRRFDRAHTKGVTCLSFSRDNSQIL-SASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSD 369 (508)
T ss_pred Eecch-HHHHhhhhhccCeeEEEEccCcchhh-cccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCC
Confidence 99988 555554 8999999999999988887 9999999999999999999887765 5677899999999999999
Q ss_pred CeEEEEEcCCCcEEEEEec--CCCCEEEEEEcC-CCCEEEEEeCC-eEEEEECCCCeeEEEEcc---CCCceEEEEEeCC
Q 044075 656 NVVSIFDVETDRLTHSFKG--HSTEIHSVCWDT-NGEYLASVSQD-SVRVWSLASGECIHELSS---SGNKFHSCIFHPS 728 (786)
Q Consensus 656 g~I~iwD~~t~~~i~~l~~--h~~~I~sv~~sp-dg~~Lasgs~D-~I~vwDl~s~~~i~~l~~---~~~~I~sv~fspd 728 (786)
|+|++|+.++.+++.+|+. ...+|+++..-| +...+++|... +|+|.++. |..++.+.. ..+...+++.+|.
T Consensus 370 gtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpk 448 (508)
T KOG0275|consen 370 GTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPK 448 (508)
T ss_pred ccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCC
Confidence 9999999999999988875 456788887777 45677777777 99998875 666777654 3567889999999
Q ss_pred CCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 729 YPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 729 g~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|.++++.+.|+.++.|...+++.. ++.-|...|..++-+|..+.|++-++||.+++|+
T Consensus 449 GewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 449 GEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred CcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 999999999999999999998876 5678999999999999999999999999999996
No 51
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.96 E-value=2.7e-29 Score=258.33 Aligned_cols=286 Identities=19% Similarity=0.331 Sum_probs=241.2
Q ss_pred cccccceeeeeEEeecCCCCeEEEEEcCCC-CEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe
Q 044075 492 ETSKAFSFNEVSSIRKSSSKVTCCHFSSDG-KLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS 570 (786)
Q Consensus 492 ~~~~~~~~~~v~~l~~H~~~V~~lafSpdg-~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs 570 (786)
.....|.-..+..|.+|.+.|.|++=+|.. ..+|+|+.||.|+|||+...++..++..|.+.|..|++.. ..+++++
T Consensus 49 KleR~fakPFv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvg 126 (433)
T KOG0268|consen 49 KLERVFAKPFVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVG 126 (433)
T ss_pred HHHHHhhccchhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEec
Confidence 344455556788899999999999999976 6799999999999999999999999999999999999986 6799999
Q ss_pred CCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCC
Q 044075 571 FDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLG 647 (786)
Q Consensus 571 ~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~ 647 (786)
.|.+|+.|.++.+ .+.++.+ .+.+..|+-+.. ...|++|+. .|.|||......+..+. ..+.++.|+|...
T Consensus 127 dDKtvK~wk~~~~--p~~tilg-~s~~~gIdh~~~-~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvET 200 (433)
T KOG0268|consen 127 DDKTVKQWKIDGP--PLHTILG-KSVYLGIDHHRK-NSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVET 200 (433)
T ss_pred CCcceeeeeccCC--cceeeec-cccccccccccc-cccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcc
Confidence 9999999998764 4555554 355677776644 446778865 59999998877776655 6678999999887
Q ss_pred EEEEEE-CCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC-eeEEEEccCCCceEEEE
Q 044075 648 LLLAAA-SENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG-ECIHELSSSGNKFHSCI 724 (786)
Q Consensus 648 ~Ll~gs-~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~ 724 (786)
.+++++ .|+.|.+||++...+++.+. -...-+.|||+|++..|+++++| .++.||++.- +++....+|.+.|.++.
T Consensus 201 sILas~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVd 279 (433)
T KOG0268|consen 201 SILASCASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVD 279 (433)
T ss_pred hheeeeccCCceEEEecccCCccceee-eeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEec
Confidence 655555 89999999999998887766 45567889999999999999999 9999999974 57788889999999999
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCeEEEEc--ccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 725 FHPSYPTLMVIGGYQSLELWNMAENKCMTIA--AHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 725 fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~--~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|+|.|.-+++|+.|.+|+||..+.+....+. ..-..|.|+.||.|.++++|||+|+.|++|+
T Consensus 280 fsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWk 343 (433)
T KOG0268|consen 280 FSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWK 343 (433)
T ss_pred cCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeee
Confidence 9999999999999999999999887654322 2234799999999999999999999999996
No 52
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=9.4e-28 Score=270.86 Aligned_cols=244 Identities=23% Similarity=0.398 Sum_probs=205.3
Q ss_pred eeEEee-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC---------------------------------------
Q 044075 501 EVSSIR-KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN--------------------------------------- 540 (786)
Q Consensus 501 ~v~~l~-~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t--------------------------------------- 540 (786)
....+. .|.+.|+|+.||+||+|||+||.||.|+||.+..
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s 337 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS 337 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence 344556 8999999999999999999999999999998653
Q ss_pred ---------------------CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEE
Q 044075 541 ---------------------FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMS 599 (786)
Q Consensus 541 ---------------------~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~s 599 (786)
.+++..+.+|.+.|.+|.|+.++ +|++++.|.+||+|++...+ |+..|. |...|+|
T Consensus 338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~-CL~~F~-HndfVTc 414 (712)
T KOG0283|consen 338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKE-CLKVFS-HNDFVTC 414 (712)
T ss_pred ccccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcc-eeeEEe-cCCeeEE
Confidence 01223456899999999999765 89999999999999999765 677665 9999999
Q ss_pred EEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe--ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec--C
Q 044075 600 LDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI--SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG--H 675 (786)
Q Consensus 600 l~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~--~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~--h 675 (786)
|+|+|.++.+|++|+-||.|+||++...+++.- .+.-|++++|.|+|...++|+.+|.+++|+.+..++...+.- |
T Consensus 415 VaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~ 494 (712)
T KOG0283|consen 415 VAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLH 494 (712)
T ss_pred EEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeec
Confidence 999999999999999999999999998887654 347789999999999999999999999999998876655431 1
Q ss_pred ------CCCEEEEEEcCC-CCEEEEEeCC-eEEEEECCCCeeEEEEccCCC--ceEEEEEeCCCCEEEEEECCCeEEEEE
Q 044075 676 ------STEIHSVCWDTN-GEYLASVSQD-SVRVWSLASGECIHELSSSGN--KFHSCIFHPSYPTLMVIGGYQSLELWN 745 (786)
Q Consensus 676 ------~~~I~sv~~spd-g~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~--~I~sv~fspdg~~L~sgs~dg~I~IwD 745 (786)
...|+++.|.|. ...+++.+.| .|+|||.++...+..|++..+ .-....|+.||++|++++.|..|+||+
T Consensus 495 ~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~ 574 (712)
T KOG0283|consen 495 NKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWK 574 (712)
T ss_pred cCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEe
Confidence 227999999874 3456667777 999999999888888886533 345678999999999999999999999
Q ss_pred CC
Q 044075 746 MA 747 (786)
Q Consensus 746 l~ 747 (786)
+.
T Consensus 575 ~~ 576 (712)
T KOG0283|consen 575 ND 576 (712)
T ss_pred CC
Confidence 73
No 53
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.96 E-value=2.6e-27 Score=252.58 Aligned_cols=289 Identities=15% Similarity=0.263 Sum_probs=231.8
Q ss_pred ceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe----eeeec-CCCCCCeEEEEEccCCCEEEEEeC
Q 044075 497 FSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ----TECTP-DDHNHIITDVRFRPNSTQLATSSF 571 (786)
Q Consensus 497 ~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~----~~~~l-~~h~~~V~sl~fspdg~~Lasgs~ 571 (786)
+....-..+.+|+..|.++++.|.|..|++|+.|..|++||+.... ..+.+ ......|.++.|++.+..|++.+.
T Consensus 155 IP~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg 234 (641)
T KOG0772|consen 155 IPGSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSG 234 (641)
T ss_pred CCccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEec
Confidence 3444556788999999999999999999999999999999987321 11222 223346999999999999988888
Q ss_pred CCcEEEEcCCCCcce-----------eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee-eEeec-----
Q 044075 572 DKTVRIWDAAKPNFC-----------LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC-ARISK----- 634 (786)
Q Consensus 572 Dg~I~VWdl~s~~~~-----------~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~-~~~~~----- 634 (786)
...++|+|-+..... +...++|...++|.+|+|.....|++|+.||++++||+...+. ..+++
T Consensus 235 ~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~ 314 (641)
T KOG0772|consen 235 SAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAG 314 (641)
T ss_pred CcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCC
Confidence 889999997654311 1234689999999999999999999999999999999986432 22222
Q ss_pred ---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCc--EE-EEEecCCC--CEEEEEEcCCCCEEEEEeCC-eEEEEECC
Q 044075 635 ---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDR--LT-HSFKGHST--EIHSVCWDTNGEYLASVSQD-SVRVWSLA 705 (786)
Q Consensus 635 ---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~--~i-~~l~~h~~--~I~sv~~spdg~~Lasgs~D-~I~vwDl~ 705 (786)
-.++.++|++++..|++|+.||.|.+|+..... +. +.-..|.. .|+||.|+++|++|++-+.| ++++||++
T Consensus 315 g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLr 394 (641)
T KOG0772|consen 315 GKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLR 394 (641)
T ss_pred CcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecc
Confidence 356889999999999999999999999986542 22 23345776 89999999999999999998 99999999
Q ss_pred CC-eeEEEEccC--CCceEEEEEeCCCCEEEEEEC------CCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEE
Q 044075 706 SG-ECIHELSSS--GNKFHSCIFHPSYPTLMVIGG------YQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVAS 775 (786)
Q Consensus 706 s~-~~i~~l~~~--~~~I~sv~fspdg~~L~sgs~------dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaS 775 (786)
.. +++....+. ..+-+.|+|+|+.+.|++|+. .+.+.+||..+...+ .+.-....|..+.|+|.-+.|+.
T Consensus 395 q~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~ 474 (641)
T KOG0772|consen 395 QFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFA 474 (641)
T ss_pred ccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheee
Confidence 75 556555443 345678999999999999874 368999999887766 45556788999999999998999
Q ss_pred EeCCCcEEEe
Q 044075 776 ASHDKSVKIW 785 (786)
Q Consensus 776 gs~DG~I~IW 785 (786)
|+.||.++||
T Consensus 475 gsgdG~~~vy 484 (641)
T KOG0772|consen 475 GSGDGTAHVY 484 (641)
T ss_pred ecCCCceEEE
Confidence 9999999987
No 54
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.96 E-value=7.5e-27 Score=258.45 Aligned_cols=284 Identities=21% Similarity=0.357 Sum_probs=239.3
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
....++.+|...|+++.|+..|..||+|+.|+.|.|||+-...-...+.+|.+.|+..-|..+.++|++++.|+.|++||
T Consensus 98 ~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~Wd 177 (888)
T KOG0306|consen 98 EILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWD 177 (888)
T ss_pred ceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEe
Confidence 46678889999999999999999999999999999999988888888888888888888887777888888888888887
Q ss_pred CCCCcc--------------------------------------------------------------------------
Q 044075 580 AAKPNF-------------------------------------------------------------------------- 585 (786)
Q Consensus 580 l~s~~~-------------------------------------------------------------------------- 585 (786)
+++...
T Consensus 178 L~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r 257 (888)
T KOG0306|consen 178 LETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDR 257 (888)
T ss_pred cccceeeeEEecccceEEEEEEecceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCccc
Confidence 654210
Q ss_pred -----------------------------------------------------------------------------e--
Q 044075 586 -----------------------------------------------------------------------------C-- 586 (786)
Q Consensus 586 -----------------------------------------------------------------------------~-- 586 (786)
.
T Consensus 258 ~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~ 337 (888)
T KOG0306|consen 258 FLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENT 337 (888)
T ss_pred EEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCccee
Confidence 0
Q ss_pred ----------------------------eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-CCe
Q 044075 587 ----------------------------LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-GGT 637 (786)
Q Consensus 587 ----------------------------~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-~~i 637 (786)
...+.+|...|.+++++.+. .++ ..+..+.|++|+..+.+|++.+. +-+
T Consensus 338 lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~-~~~-~Sga~~SikiWn~~t~kciRTi~~~y~ 415 (888)
T KOG0306|consen 338 LVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDS-ILL-ASGAGESIKIWNRDTLKCIRTITCGYI 415 (888)
T ss_pred EEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCc-eee-eecCCCcEEEEEccCcceeEEeccccE
Confidence 00012466677778887543 344 34447899999999999998877 556
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC-----CeeEE
Q 044075 638 VQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS-----GECIH 711 (786)
Q Consensus 638 ~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s-----~~~i~ 711 (786)
.+.+|-|.++++++|...|.+.+||+.+...+.++..|.+.|.+++.+||++.+++++.| +|++||..- +...+
T Consensus 416 l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k 495 (888)
T KOG0306|consen 416 LASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKK 495 (888)
T ss_pred EEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccce
Confidence 778899999999999999999999999999999999999999999999999999999999 999999752 21111
Q ss_pred EEc-------cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEE
Q 044075 712 ELS-------SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVK 783 (786)
Q Consensus 712 ~l~-------~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~ 783 (786)
.+. .-...|.|+.++||+++|+++--|.+|+||-+++-+.. .+.+|.-+|.|+..+||+++++|||.|..|+
T Consensus 496 ~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVK 575 (888)
T KOG0306|consen 496 VLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVK 575 (888)
T ss_pred eeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceE
Confidence 111 23578999999999999999999999999999998765 8899999999999999999999999999999
Q ss_pred Ee
Q 044075 784 IW 785 (786)
Q Consensus 784 IW 785 (786)
||
T Consensus 576 iW 577 (888)
T KOG0306|consen 576 IW 577 (888)
T ss_pred Ee
Confidence 99
No 55
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.96 E-value=1.3e-28 Score=251.37 Aligned_cols=244 Identities=20% Similarity=0.419 Sum_probs=214.9
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
++.++..+.||++.|.|+.|. .+.|++|+.|.+|+|||+++++++.++.+|...|..+.|+ ..++++++.|.+|.|
T Consensus 226 ~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaV 301 (499)
T KOG0281|consen 226 SLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAV 301 (499)
T ss_pred cHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEE
Confidence 456778899999999999997 5599999999999999999999999999999999999998 568999999999999
Q ss_pred EcCCCCcc--eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEE-eCCCCEEEEEEC
Q 044075 578 WDAAKPNF--CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRF-QPRLGLLLAAAS 654 (786)
Q Consensus 578 Wdl~s~~~--~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~-sp~g~~Ll~gs~ 654 (786)
||+..+.. +.+.+.+|...|..+.|+. .++++++.|.+|++|++.+.++++...++-..++. ...++++++|++
T Consensus 302 Wdm~sps~it~rrVLvGHrAaVNvVdfd~---kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr~rlvVSGSS 378 (499)
T KOG0281|consen 302 WDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSS 378 (499)
T ss_pred EeccCchHHHHHHHHhhhhhheeeecccc---ceEEEecCCceEEEEeccceeeehhhhcccccceehhccCeEEEecCC
Confidence 99987652 3557889999999999973 36779999999999999999999998877766643 567788999999
Q ss_pred CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe---------eEEEEccCCCceEEEE
Q 044075 655 ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE---------CIHELSSSGNKFHSCI 724 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~---------~i~~l~~~~~~I~sv~ 724 (786)
|.+|++||++.|.+++.+++|..-|.||.|+ .+.|++|+.| +|+|||+..+. |+.++..|.+.|..+.
T Consensus 379 DntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQ 456 (499)
T KOG0281|consen 379 DNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ 456 (499)
T ss_pred CceEEEEeccccHHHHHHhchHHhhhheeec--CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEe
Confidence 9999999999999999999999999999994 6679999999 99999998653 5666777889999999
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 725 FHPSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 725 fspdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
|. ...+++++.|.+|.|||..++...
T Consensus 457 FD--~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 457 FD--EFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred ec--ceEEEeccCCCeEEEEEcCCCCcc
Confidence 95 447999999999999999877543
No 56
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.96 E-value=5.3e-27 Score=242.91 Aligned_cols=273 Identities=19% Similarity=0.333 Sum_probs=230.1
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCC---CEEEEEeCCCcEEEEcCCCC
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNS---TQLATSSFDKTVRIWDAAKP 583 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg---~~Lasgs~Dg~I~VWdl~s~ 583 (786)
.|.+-|.++... +++|++|++||.++|||.. |+....+.+|.++|.+++|.-.. ..|++++.|.++++|.++.+
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~ 179 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVG 179 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCc
Confidence 388889988887 7799999999999999965 78899999999999999886533 35999999999999998876
Q ss_pred cce---eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe-------------------------ee---Ee
Q 044075 584 NFC---LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS-------------------------CA---RI 632 (786)
Q Consensus 584 ~~~---~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~-------------------------~~---~~ 632 (786)
... .....+|...|.++...+++.. |++++.|..|++|+..... .+ .-
T Consensus 180 ~~~~~~~~~~~GHk~~V~sVsv~~sgtr-~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~G 258 (423)
T KOG0313|consen 180 ENKVKALKVCRGHKRSVDSVSVDSSGTR-FCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEG 258 (423)
T ss_pred hhhhhHHhHhcccccceeEEEecCCCCe-EEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecc
Confidence 532 3344599999999999988775 5599999999999943110 11 11
Q ss_pred ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC---e
Q 044075 633 SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG---E 708 (786)
Q Consensus 633 ~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~---~ 708 (786)
+...+..+.|++ ...+++++.|.+|++||++++..+..+. ....++||.++|..++|++|+.| .|++||.+++ -
T Consensus 259 Ht~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~ 336 (423)
T KOG0313|consen 259 HTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSV 336 (423)
T ss_pred cccceeeEEEcC-CCceEeecccceEEEEEeecccceeeee-cCcceeEeecccccceeeecCCCCceeecCCCCCCCce
Confidence 224567788887 6789999999999999999999888887 46779999999999999999999 9999999975 3
Q ss_pred eEEEEccCCCceEEEEEeCCCC-EEEEEECCCeEEEEECCCCe--EEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 709 CIHELSSSGNKFHSCIFHPSYP-TLMVIGGYQSLELWNMAENK--CMTIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 709 ~i~~l~~~~~~I~sv~fspdg~-~L~sgs~dg~I~IwDl~~~~--~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
....+.+|.+.|.++.|+|... .|++++.|+++++||++..+ +..+.+|.+.|.++.|. ++.+|++|+.|..|+|+
T Consensus 337 v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~ 415 (423)
T KOG0313|consen 337 VSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIF 415 (423)
T ss_pred eEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccCcceEEEe
Confidence 5578899999999999999775 47788999999999999765 55888999999999998 46699999999999998
Q ss_pred C
Q 044075 786 K 786 (786)
Q Consensus 786 d 786 (786)
+
T Consensus 416 ~ 416 (423)
T KOG0313|consen 416 K 416 (423)
T ss_pred c
Confidence 4
No 57
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=7.9e-27 Score=248.70 Aligned_cols=274 Identities=17% Similarity=0.255 Sum_probs=241.0
Q ss_pred CCCCeEEEEEcCCCCE-EEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce
Q 044075 508 SSSKVTCCHFSSDGKL-LASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC 586 (786)
Q Consensus 508 H~~~V~~lafSpdg~~-Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~ 586 (786)
-.+.|.+++|+|...+ +|+.+ .-.|.||+..+....+++......|++++|..||++|++|...|.|+|||+.+ ...
T Consensus 25 e~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~-r~i 102 (487)
T KOG0310|consen 25 EHNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS-RVI 102 (487)
T ss_pred ccCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc-HHH
Confidence 3467999999995443 55444 45799999999888888888889999999999999999999999999999554 557
Q ss_pred eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee---cCCeEEEEEeCCCC-EEEEEECCCeEEEEE
Q 044075 587 LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS---KGGTVQVRFQPRLG-LLLAAASENVVSIFD 662 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~---~~~i~~i~~sp~g~-~Ll~gs~dg~I~iwD 662 (786)
++.+.+|..+|..+.|+|.++.++++|+.|+.+++||+.+....... +.-+.+.+|+|-.. .+++|+.||.|++||
T Consensus 103 LR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~D 182 (487)
T KOG0310|consen 103 LRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWD 182 (487)
T ss_pred HHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEE
Confidence 88899999999999999999999999999999999999998864333 35678888988765 688999999999999
Q ss_pred cCCC-cEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCC-eeEEEEccCCCceEEEEEeCCCCEEEEEECCCe
Q 044075 663 VETD-RLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASG-ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQS 740 (786)
Q Consensus 663 ~~t~-~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~-~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~ 740 (786)
++.. ..+.++. |..+|..+++-|.|..|++++...|+|||+.+| +.+..+..|...|+|+.+..++..|++++-|+.
T Consensus 183 tR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~ 261 (487)
T KOG0310|consen 183 TRSLTSRVVELN-HGCPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRH 261 (487)
T ss_pred eccCCceeEEec-CCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccc
Confidence 9988 6677776 999999999999999999999999999999965 555566669999999999999999999999999
Q ss_pred EEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 741 LELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 741 I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~I 784 (786)
|++||+.+.+.+.-..-.++|.+++.+|++..++.|..||.+-+
T Consensus 262 VKVfd~t~~Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~ 305 (487)
T KOG0310|consen 262 VKVFDTTNYKVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSI 305 (487)
T ss_pred eEEEEccceEEEEeeecccceeeEEecCCCceEEEecccceeee
Confidence 99999999998888888999999999999999999999998754
No 58
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.96 E-value=4.4e-27 Score=246.73 Aligned_cols=274 Identities=20% Similarity=0.344 Sum_probs=246.9
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
..|+++...|....+++|+.|..+.++|......+.++++|...|+.+.|+|+...+++++.|..|+||...... +...
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s-~~~~ 298 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS-EPTS 298 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc-Cccc
Confidence 468899998887899999999999999999999999999999999999999999999999999999999998766 5677
Q ss_pred ecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC-----CeEEEEEeCCCCEEEEEECCCeEEEEEcC
Q 044075 590 YTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKG-----GTVQVRFQPRLGLLLAAASENVVSIFDVE 664 (786)
Q Consensus 590 ~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~-----~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~ 664 (786)
...|..+|+.+..+|.+++++ +++.|+++.+.|++++.++..... .+++..|+|||..|.+|..|+.|+|||+.
T Consensus 299 ~~~h~~~V~~ls~h~tgeYll-sAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlk 377 (506)
T KOG0289|consen 299 SRPHEEPVTGLSLHPTGEYLL-SASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLK 377 (506)
T ss_pred cccccccceeeeeccCCcEEE-EecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcC
Confidence 888999999999999999887 889999999999999998776654 37889999999999999999999999999
Q ss_pred CCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCC-CceEEEEEeCCCCEEEEEECCCeEE
Q 044075 665 TDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSG-NKFHSCIFHPSYPTLMVIGGYQSLE 742 (786)
Q Consensus 665 t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~-~~I~sv~fspdg~~L~sgs~dg~I~ 742 (786)
....+..|.+|.++|..|.|+.+|.||+++++| .|++||++..+.+.++...+ ..+.++.|.+.|.+|++++.|=.|+
T Consensus 378 s~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy 457 (506)
T KOG0289|consen 378 SQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVY 457 (506)
T ss_pred CccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEE
Confidence 999999999999999999999999999999999 79999999988887776543 4699999999999999998887777
Q ss_pred EEECCCCeE--E-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 743 LWNMAENKC--M-TIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 743 IwDl~~~~~--~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
+++-.+... + .+..|.+..+++.|.....++++++.|..++|+
T Consensus 458 ~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~ 503 (506)
T KOG0289|consen 458 ICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLY 503 (506)
T ss_pred EEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEe
Confidence 777555433 2 556788899999999999999999999999887
No 59
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=4.1e-27 Score=232.47 Aligned_cols=274 Identities=22% Similarity=0.365 Sum_probs=227.4
Q ss_pred EEEEEcC-CCCEEEEEE-------CCCeEEEEEcCCCeeeeec--CCCCCCeEEEEEccC-CCEEEEEeCCCcEEEEcCC
Q 044075 513 TCCHFSS-DGKLLASAG-------HDKKVVVWNMENFQTECTP--DDHNHIITDVRFRPN-STQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 513 ~~lafSp-dg~~Lasgs-------~Dg~V~IWdl~t~~~~~~l--~~h~~~V~sl~fspd-g~~Lasgs~Dg~I~VWdl~ 581 (786)
.++.||| -..+||++. ..|++.|.++...+-+..+ -.-.+.+.+|+|+++ .+.+++++.||+++|||+.
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 5788998 233344332 4789999999754444333 245678999999994 5678899999999999988
Q ss_pred CCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC---eEEEEEeCC-CCEEEEEECCCe
Q 044075 582 KPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG---TVQVRFQPR-LGLLLAAASENV 657 (786)
Q Consensus 582 s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~---i~~i~~sp~-g~~Ll~gs~dg~ 657 (786)
....++..++.|...|.++.|++..+..+++++.|++|++|+......+..++++ |....|+|. .+.+++++.|++
T Consensus 92 ~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~ 171 (311)
T KOG0277|consen 92 MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGT 171 (311)
T ss_pred CCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCce
Confidence 8888899999999999999999999988889999999999999988888887755 556689985 567888899999
Q ss_pred EEEEEcCCCcEEEEEecCCCCEEEEEEcC-CCCEEEEEeCC-eEEEEECCCC-eeEEEEccCCCceEEEEEeCCC-CEEE
Q 044075 658 VSIFDVETDRLTHSFKGHSTEIHSVCWDT-NGEYLASVSQD-SVRVWSLASG-ECIHELSSSGNKFHSCIFHPSY-PTLM 733 (786)
Q Consensus 658 I~iwD~~t~~~i~~l~~h~~~I~sv~~sp-dg~~Lasgs~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~fspdg-~~L~ 733 (786)
+++||++.......+..|...|.|+.|+. +...|++|+.| .|++||+++- .++.++.+|.-.|..+.|+|.. ..|+
T Consensus 172 l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLa 251 (311)
T KOG0277|consen 172 LRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLA 251 (311)
T ss_pred EEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhh
Confidence 99999987644445888999999999987 56678888888 9999999975 5788999999999999999975 5678
Q ss_pred EEECCCeEEEEECCCCeE-E-EEcccCCCeEEEEEcC-CCCEEEEEeCCCcEEEeC
Q 044075 734 VIGGYQSLELWNMAENKC-M-TIAAHDCVISALAQSP-VTGMVASASHDKSVKIWK 786 (786)
Q Consensus 734 sgs~dg~I~IwDl~~~~~-~-~~~~h~~~V~slafsp-dg~~LaSgs~DG~I~IWd 786 (786)
+++.|-+++|||...... + +...|..-|..+.|++ +..++|+++.|+.++||+
T Consensus 252 SasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 252 SASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred hccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeec
Confidence 889999999999885433 3 5557888899999997 566999999999999996
No 60
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.95 E-value=3.9e-26 Score=235.63 Aligned_cols=266 Identities=18% Similarity=0.352 Sum_probs=223.0
Q ss_pred cceeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCee
Q 044075 464 VESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQT 543 (786)
Q Consensus 464 ~~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~ 543 (786)
...++....+|.+..++..... +....+.+|++.|+|+.||.||.+||||+-+|.|+||+..++..
T Consensus 75 ~~~l~aTGGgDD~AflW~~~~g--------------e~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~ 140 (399)
T KOG0296|consen 75 NNNLVATGGGDDLAFLWDISTG--------------EFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGE 140 (399)
T ss_pred CCceEEecCCCceEEEEEccCC--------------cceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCce
Confidence 3344555566666666654422 35668899999999999999999999999999999999999999
Q ss_pred eeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEe
Q 044075 544 ECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWN 623 (786)
Q Consensus 544 ~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwD 623 (786)
...+......|.-++|+|.+.+|++|+.||.|.+|.+.+.. ..+.+.+|..++++-.|.|+|+.++ ++..||+|++|+
T Consensus 141 ~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~-~~kv~~Gh~~~ct~G~f~pdGKr~~-tgy~dgti~~Wn 218 (399)
T KOG0296|consen 141 QWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQA-LCKVMSGHNSPCTCGEFIPDGKRIL-TGYDDGTIIVWN 218 (399)
T ss_pred EEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcc-eeeEecCCCCCcccccccCCCceEE-EEecCceEEEEe
Confidence 98887777789999999999999999999999999999864 5888999999999999999998776 888899999999
Q ss_pred CCCCeeeEeecC------------------------Ce------------------------------EEE---EEeCCC
Q 044075 624 LSQYSCARISKG------------------------GT------------------------------VQV---RFQPRL 646 (786)
Q Consensus 624 l~~~~~~~~~~~------------------------~i------------------------------~~i---~~sp~g 646 (786)
+.++..+..... .. .++ .++..-
T Consensus 219 ~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~l 298 (399)
T KOG0296|consen 219 PKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKL 298 (399)
T ss_pred cCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhccccccc
Confidence 988765443320 00 001 111222
Q ss_pred CEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEE
Q 044075 647 GLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIF 725 (786)
Q Consensus 647 ~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~f 725 (786)
...++|+-||+|.|||+...++.+.+. |...|..+.|.+ ..+|++++.+ .|+.||.++|.++.++.+|...|.++++
T Consensus 299 pL~A~G~vdG~i~iyD~a~~~~R~~c~-he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~l 376 (399)
T KOG0296|consen 299 PLAACGSVDGTIAIYDLAASTLRHICE-HEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFAL 376 (399)
T ss_pred chhhcccccceEEEEecccchhheecc-CCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEE
Confidence 456788889999999999888777776 999999999998 6777777777 9999999999999999999999999999
Q ss_pred eCCCCEEEEEECCCeEEEEECC
Q 044075 726 HPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 726 spdg~~L~sgs~dg~I~IwDl~ 747 (786)
+|+.+.+++++.|++.+||+..
T Consensus 377 s~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 377 SPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred cCCCcEEEEecCCCeEEEEecC
Confidence 9999999999999999999864
No 61
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.95 E-value=3.5e-26 Score=261.10 Aligned_cols=266 Identities=25% Similarity=0.465 Sum_probs=237.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeee-cCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECT-PDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC 586 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~-l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~ 586 (786)
|...|.|..|. ..++++++.|.+|++||..++..+.. +.+|.+.|.+++|...+.+|++|+.|.+++|||+.++. +
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~-C 283 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGE-C 283 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCc-E
Confidence 67788999998 55899999999999999999999888 99999999999999878899999999999999988877 8
Q ss_pred eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEc
Q 044075 587 LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDV 663 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~ 663 (786)
...+.+|.+.|.++... ..++++|+.|.+|++|++.++.++.... +.|.++.++ +..+++|+.|+.|.+||+
T Consensus 284 ~~~l~gh~stv~~~~~~---~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~ 358 (537)
T KOG0274|consen 284 THSLQGHTSSVRCLTID---PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDP 358 (537)
T ss_pred EEEecCCCceEEEEEcc---CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEh
Confidence 99999999999999976 4466788999999999999999888766 455666665 889999999999999999
Q ss_pred CCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC-eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeE
Q 044075 664 ETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG-ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSL 741 (786)
Q Consensus 664 ~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I 741 (786)
.++++++.+.+|...|.++.+... .++++|+.| +|++||+++. +|+.++..|..-+..+.+ .+++|++++.|+.|
T Consensus 359 ~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~I 435 (537)
T KOG0274|consen 359 RTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL--RDNFLVSSSADGTI 435 (537)
T ss_pred hhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc--ccceeEeccccccE
Confidence 999999999999999999988766 899999999 8999999999 999999999888866655 46689999999999
Q ss_pred EEEECCCCeEEE-Ecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 742 ELWNMAENKCMT-IAA-HDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 742 ~IwDl~~~~~~~-~~~-h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
++||..+++++. +.+ |...|+++++. ...+++++.||.+++||
T Consensus 436 k~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~d 480 (537)
T KOG0274|consen 436 KLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWD 480 (537)
T ss_pred EEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEe
Confidence 999999999884 444 56889999887 46788999999999997
No 62
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=1.1e-26 Score=242.09 Aligned_cols=260 Identities=18% Similarity=0.325 Sum_probs=220.7
Q ss_pred CCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC-CCCCCeEEEEEccCCC
Q 044075 486 PSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD-DHNHIITDVRFRPNST 564 (786)
Q Consensus 486 ~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~-~h~~~V~sl~fspdg~ 564 (786)
.....|.......++..+++.+|..+|..+.||||.++|++|+.|..+++||+.++.....+. +|...+.+++|.||+.
T Consensus 246 ~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~ 325 (519)
T KOG0293|consen 246 STAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGF 325 (519)
T ss_pred ceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCc
Confidence 333444455555588899999999999999999999999999999999999999999888774 3578899999999999
Q ss_pred EEEEEeCCCcEEEEcCCCCcceeeeecCC-CCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE--eecCCeEEEE
Q 044075 565 QLATSSFDKTVRIWDAAKPNFCLQTYTGH-NNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR--ISKGGTVQVR 641 (786)
Q Consensus 565 ~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h-~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~--~~~~~i~~i~ 641 (786)
.+++|+.|++|..||++... .....+- ...|.+++..+||+.+++++ .|..|++|+.+...... ....++++++
T Consensus 326 ~~V~Gs~dr~i~~wdlDgn~--~~~W~gvr~~~v~dlait~Dgk~vl~v~-~d~~i~l~~~e~~~dr~lise~~~its~~ 402 (519)
T KOG0293|consen 326 RFVTGSPDRTIIMWDLDGNI--LGNWEGVRDPKVHDLAITYDGKYVLLVT-VDKKIRLYNREARVDRGLISEEQPITSFS 402 (519)
T ss_pred eeEecCCCCcEEEecCCcch--hhcccccccceeEEEEEcCCCcEEEEEe-cccceeeechhhhhhhccccccCceeEEE
Confidence 99999999999999997643 3333332 25699999999999988554 69999999998766553 3447899999
Q ss_pred EeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCC--EEEEEEcC-CCCEEEEEeCC-eEEEEECCCCeeEEEEccCC
Q 044075 642 FQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTE--IHSVCWDT-NGEYLASVSQD-SVRVWSLASGECIHELSSSG 717 (786)
Q Consensus 642 ~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~--I~sv~~sp-dg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~ 717 (786)
++.+++++++.-.+..|.+||++..+.+..+.+|... |..-||-. +..++++||+| .|+||+..+++++.++.+|.
T Consensus 403 iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs 482 (519)
T KOG0293|consen 403 ISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHS 482 (519)
T ss_pred EcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCc
Confidence 9999999999999999999999988999999988654 44556654 55899999999 99999999999999999999
Q ss_pred CceEEEEEeCCCC-EEEEEECCCeEEEEECCC
Q 044075 718 NKFHSCIFHPSYP-TLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 718 ~~I~sv~fspdg~-~L~sgs~dg~I~IwDl~~ 748 (786)
..|.+++|+|..+ .+++++.||+|+||....
T Consensus 483 ~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 483 KTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred ceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 9999999999765 688889999999998764
No 63
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.95 E-value=1.3e-27 Score=254.27 Aligned_cols=245 Identities=17% Similarity=0.319 Sum_probs=217.8
Q ss_pred CeeeeecCCCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcE
Q 044075 541 FQTECTPDDHNHIITDVRFRP-NSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEI 619 (786)
Q Consensus 541 ~~~~~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I 619 (786)
.+.+.++.+|+..|+++.|.| .+.+|++++.|+.|+||++.....+++++.+|..+|.+++|+.++..++ +++-|+.|
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fL-S~sfD~~l 282 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFL-SASFDRFL 282 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeee-eeecceee
Confidence 356778899999999999999 8899999999999999999997789999999999999999999998877 99999999
Q ss_pred EEEeCCCCeeeEeec--CCeEEEEEeCCC-CEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC
Q 044075 620 RFWNLSQYSCARISK--GGTVQVRFQPRL-GLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ 696 (786)
Q Consensus 620 ~iwDl~~~~~~~~~~--~~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~ 696 (786)
++||++++.++..+. ..+.++.|+|++ +.|++|+.|+.|+.||+++++.+..+..|-+.|..|.|-++|+++++.++
T Consensus 283 KlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSD 362 (503)
T KOG0282|consen 283 KLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSD 362 (503)
T ss_pred eeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeecc
Confidence 999999999988776 456889999999 88999999999999999999999999999999999999999999999999
Q ss_pred C-eEEEEECCCCeeEEEEccC-CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe----EEEEcccC--CCeEEEEEcC
Q 044075 697 D-SVRVWSLASGECIHELSSS-GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK----CMTIAAHD--CVISALAQSP 768 (786)
Q Consensus 697 D-~I~vwDl~s~~~i~~l~~~-~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~----~~~~~~h~--~~V~slafsp 768 (786)
| +++||+.+....+..+..+ .....+|..+|.++++++-+.|+.|.||.+...- ...+.+|. +.-..|.|||
T Consensus 363 dks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSp 442 (503)
T KOG0282|consen 363 DKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSP 442 (503)
T ss_pred CccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcC
Confidence 9 9999999988766554332 3456788999999999999999999999865432 23556664 4566789999
Q ss_pred CCCEEEEEeCCCcEEEeC
Q 044075 769 VTGMVASASHDKSVKIWK 786 (786)
Q Consensus 769 dg~~LaSgs~DG~I~IWd 786 (786)
||.+|++|+.||.|.+||
T Consensus 443 DG~~l~SGdsdG~v~~wd 460 (503)
T KOG0282|consen 443 DGRTLCSGDSDGKVNFWD 460 (503)
T ss_pred CCCeEEeecCCccEEEee
Confidence 999999999999999997
No 64
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.95 E-value=1.7e-25 Score=222.99 Aligned_cols=262 Identities=23% Similarity=0.394 Sum_probs=210.3
Q ss_pred eeccccCCCcccccccccceeeeeEEee-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcC--CCeeeeecCCCCCCeE
Q 044075 479 FGTLKRNPSEQATETSKAFSFNEVSSIR-KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNME--NFQTECTPDDHNHIIT 555 (786)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~-~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~--t~~~~~~l~~h~~~V~ 555 (786)
+.+.......+.+.....-+|.+...+. +|+..|.+++|+|.|++||+++.|.++.||.-. +++++.++++|...|.
T Consensus 30 lAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK 109 (312)
T KOG0645|consen 30 LASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVK 109 (312)
T ss_pred EEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeecccccee
Confidence 3333333344444444444566665654 699999999999999999999999999999865 5788999999999999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEcCCCCc--ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC---CCeee
Q 044075 556 DVRFRPNSTQLATSSFDKTVRIWDAAKPN--FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS---QYSCA 630 (786)
Q Consensus 556 sl~fspdg~~Lasgs~Dg~I~VWdl~s~~--~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~---~~~~~ 630 (786)
|++|+++|++||+++.|+.|-||.+..+. .+...+.+|...|..+.|||... ||++|+.|.+|++|+-. ...+.
T Consensus 110 ~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~d-lL~S~SYDnTIk~~~~~~dddW~c~ 188 (312)
T KOG0645|consen 110 CVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTED-LLFSCSYDNTIKVYRDEDDDDWECV 188 (312)
T ss_pred EEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcc-eeEEeccCCeEEEEeecCCCCeeEE
Confidence 99999999999999999999999987433 46778999999999999999865 56699999999999876 23455
Q ss_pred Eeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC
Q 044075 631 RISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS 706 (786)
Q Consensus 631 ~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s 706 (786)
..+. ..+.+++|++.|..+++++.|++|+||-..+.-. ..|...+..+.|. ...|++++.| .|+||....
T Consensus 189 ~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~~----~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~ 262 (312)
T KOG0645|consen 189 QTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDLS----GMHSRALYDVPWD--NGVIASGGGDDAIRLFKESD 262 (312)
T ss_pred EEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCcc----hhcccceEeeeec--ccceEeccCCCEEEEEEecC
Confidence 5544 4678899999999999999999999998663211 1278899999998 5578888888 999997664
Q ss_pred C------eeE-EEEccCCCceEEEEEeCC-CCEEEEEECCCeEEEEECC
Q 044075 707 G------ECI-HELSSSGNKFHSCIFHPS-YPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 707 ~------~~i-~~l~~~~~~I~sv~fspd-g~~L~sgs~dg~I~IwDl~ 747 (786)
. +.+ +.-..|+..|+++.|.|. .+.|++++.||.|++|.+.
T Consensus 263 ~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 263 SPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred CCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 2 111 233467889999999994 6789999999999999864
No 65
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=1.8e-25 Score=272.20 Aligned_cols=254 Identities=13% Similarity=0.244 Sum_probs=214.6
Q ss_pred CCeEEEEEcCCCeeeeec-----CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc-------ceeeeecCCCCCe
Q 044075 530 DKKVVVWNMENFQTECTP-----DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN-------FCLQTYTGHNNHV 597 (786)
Q Consensus 530 Dg~V~IWdl~t~~~~~~l-----~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~-------~~~~~~~~h~~~V 597 (786)
+|.+++|+..+.+....+ ..|...|++++|+|++++|++|+.|+.|+|||+.... .....+. +...|
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v 535 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKL 535 (793)
T ss_pred hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCce
Confidence 678899998876655443 4589999999999999999999999999999975421 1122233 34679
Q ss_pred EEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeC-CCCEEEEEECCCeEEEEEcCCCcEEEEEe
Q 044075 598 MSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQP-RLGLLLAAASENVVSIFDVETDRLTHSFK 673 (786)
Q Consensus 598 ~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp-~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~ 673 (786)
.+++|++....++++++.||+|++||+.+.+.+..+. +.+.+++|+| ++.+|++++.|+.|++||++++..+..+.
T Consensus 536 ~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~ 615 (793)
T PLN00181 536 SGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK 615 (793)
T ss_pred eeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe
Confidence 9999998766678899999999999999887766543 6689999996 77899999999999999999998888887
Q ss_pred cCCCCEEEEEEc-CCCCEEEEEeCC-eEEEEECCCCe-eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC-
Q 044075 674 GHSTEIHSVCWD-TNGEYLASVSQD-SVRVWSLASGE-CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN- 749 (786)
Q Consensus 674 ~h~~~I~sv~~s-pdg~~Lasgs~D-~I~vwDl~s~~-~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~- 749 (786)
.+ ..|.++.|+ +++.+|++|+.| .|++||+++.+ .+..+.+|...|.++.|. ++.+|++++.|+.|+|||+...
T Consensus 616 ~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~ 693 (793)
T PLN00181 616 TK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSI 693 (793)
T ss_pred cC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCc
Confidence 54 679999995 579999999999 99999998865 567788899999999997 6789999999999999999743
Q ss_pred ------eEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 750 ------KCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 750 ------~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
....+.+|...+.+++|++++.+|++|+.||.|+||+
T Consensus 694 ~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~ 736 (793)
T PLN00181 694 SGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYH 736 (793)
T ss_pred cccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 2346778999999999999999999999999999996
No 66
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=7.5e-26 Score=261.14 Aligned_cols=277 Identities=20% Similarity=0.349 Sum_probs=234.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEE--CCCeEEEEEcCC------------CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCC
Q 044075 508 SSSKVTCCHFSSDGKLLASAG--HDKKVVVWNMEN------------FQTECTPDDHNHIITDVRFRPNSTQLATSSFDK 573 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs--~Dg~V~IWdl~t------------~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg 573 (786)
+...|.+++.+|||..+|||+ .||.++||+.+. .+.+.....|.+.|+|+.|++||.+||+|++|+
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~ 91 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR 91 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence 455699999999999999999 899999998752 234556678999999999999999999999999
Q ss_pred cEEEEcCCC------C-----------cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--
Q 044075 574 TVRIWDAAK------P-----------NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-- 634 (786)
Q Consensus 574 ~I~VWdl~s------~-----------~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-- 634 (786)
.|.||+... . -.++..+.+|...|..++|+|++. ++++++.|++|.+|+..+++.+..++
T Consensus 92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~-~lvS~s~DnsViiwn~~tF~~~~vl~~H 170 (942)
T KOG0973|consen 92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDS-LLVSVSLDNSVIIWNAKTFELLKVLRGH 170 (942)
T ss_pred eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCcc-EEEEecccceEEEEccccceeeeeeecc
Confidence 999998872 0 024667889999999999999765 66699999999999999998777666
Q ss_pred -CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecC------CCCEEEEEEcCCCCEEEEEe----CC-eEEEE
Q 044075 635 -GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGH------STEIHSVCWDTNGEYLASVS----QD-SVRVW 702 (786)
Q Consensus 635 -~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h------~~~I~sv~~spdg~~Lasgs----~D-~I~vw 702 (786)
+.+..+.|.|-|++|++-+.|++|+||++.+....+.+.++ ...+..+.|+|||.+|++.. .. ++.|.
T Consensus 171 ~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~Ii 250 (942)
T KOG0973|consen 171 QSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAII 250 (942)
T ss_pred cccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEE
Confidence 56778999999999999999999999998877777766543 34578899999999999864 22 79999
Q ss_pred ECCCCeeEEEEccCCCceEEEEEeCC-----CC------------EEEEEECCCeEEEEECCCCeEEEEc--ccCCCeEE
Q 044075 703 SLASGECIHELSSSGNKFHSCIFHPS-----YP------------TLMVIGGYQSLELWNMAENKCMTIA--AHDCVISA 763 (786)
Q Consensus 703 Dl~s~~~i~~l~~~~~~I~sv~fspd-----g~------------~L~sgs~dg~I~IwDl~~~~~~~~~--~h~~~V~s 763 (786)
+-.+.+.-..+.+|..++.++.|+|. .. .+++|+.|++|-||.....+.+... -....|.+
T Consensus 251 eR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~D 330 (942)
T KOG0973|consen 251 ERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVD 330 (942)
T ss_pred ecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceee
Confidence 99888988999999999999999872 11 5788899999999998776665332 34678999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEe
Q 044075 764 LAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 764 lafspdg~~LaSgs~DG~I~IW 785 (786)
++|+|||-.|+.||.||+|.+.
T Consensus 331 msWspdG~~LfacS~DGtV~~i 352 (942)
T KOG0973|consen 331 MSWSPDGFSLFACSLDGTVALI 352 (942)
T ss_pred eeEcCCCCeEEEEecCCeEEEE
Confidence 9999999999999999999875
No 67
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.95 E-value=2.9e-26 Score=231.41 Aligned_cols=241 Identities=18% Similarity=0.343 Sum_probs=208.8
Q ss_pred eeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEe
Q 044075 544 ECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWN 623 (786)
Q Consensus 544 ~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwD 623 (786)
+..+.+|++.|..+.|+|+|.+|++|+.|..|.+|++.....-...+++|.+.|..+.|.++++.++ +|+.|.+|+.||
T Consensus 40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~-S~gtDk~v~~wD 118 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHIL-SCGTDKTVRGWD 118 (338)
T ss_pred hhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEE-EecCCceEEEEe
Confidence 4456899999999999999999999999999999998766656778889999999999999998777 999999999999
Q ss_pred CCCCeeeEeecCCeEEE---EEeCCCC-EEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-e
Q 044075 624 LSQYSCARISKGGTVQV---RFQPRLG-LLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-S 698 (786)
Q Consensus 624 l~~~~~~~~~~~~i~~i---~~sp~g~-~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~ 698 (786)
.+++++.+.++++..++ .-...|. .+.+++.|+++++||+++...++++. ....+++++|...+.-+++|+-| .
T Consensus 119 ~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ 197 (338)
T KOG0265|consen 119 AETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDND 197 (338)
T ss_pred cccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecccccceeeccccCc
Confidence 99999999888665444 3223333 45566678999999999998888876 56789999999999999999999 9
Q ss_pred EEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC----eEE-EEccc----CCCeEEEEEcCC
Q 044075 699 VRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN----KCM-TIAAH----DCVISALAQSPV 769 (786)
Q Consensus 699 I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~----~~~-~~~~h----~~~V~slafspd 769 (786)
|++||++..+....+.+|..+|+.+..+++|.++++-+.|.++++||++.. .++ .+.+| ......++|+|+
T Consensus 198 ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~ 277 (338)
T KOG0265|consen 198 IKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPN 277 (338)
T ss_pred eeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCC
Confidence 999999999999999999999999999999999999999999999999753 333 33333 334567899999
Q ss_pred CCEEEEEeCCCcEEEeC
Q 044075 770 TGMVASASHDKSVKIWK 786 (786)
Q Consensus 770 g~~LaSgs~DG~I~IWd 786 (786)
+..+..|+.|..|+|||
T Consensus 278 ~~~i~ags~dr~vyvwd 294 (338)
T KOG0265|consen 278 GTKITAGSADRFVYVWD 294 (338)
T ss_pred CCccccccccceEEEee
Confidence 99999999999999997
No 68
>PTZ00420 coronin; Provisional
Probab=99.95 E-value=8.7e-25 Score=250.52 Aligned_cols=245 Identities=16% Similarity=0.225 Sum_probs=199.5
Q ss_pred EECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccC-CCEEEEEeCCCcEEEEcCCCCcc-------eeeeecCCCCCeE
Q 044075 527 AGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPN-STQLATSSFDKTVRIWDAAKPNF-------CLQTYTGHNNHVM 598 (786)
Q Consensus 527 gs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspd-g~~Lasgs~Dg~I~VWdl~s~~~-------~~~~~~~h~~~V~ 598 (786)
|+.++.|+||+......+..+.+|...|.+++|+|+ +.+|++|+.|++|+|||+.+... .+..+.+|...|.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 567889999999888888899999999999999996 78999999999999999976431 2346788999999
Q ss_pred EEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee--cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCC
Q 044075 599 SLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS--KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHS 676 (786)
Q Consensus 599 sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~--~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~ 676 (786)
+++|+|++..++++++.|+.|++||++++.....+ ...+.+++|+++|..|++++.|+.|+|||+++++.+..+.+|.
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~ 209 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHD 209 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEeccc
Confidence 99999999888889999999999999988755433 3668899999999999999999999999999999999999998
Q ss_pred CCEEEE-----EEcCCCCEEEEEeCC-----eEEEEECCC-CeeEEEEccC--CCceEEEEEeCCCCEEEEEECCCeEEE
Q 044075 677 TEIHSV-----CWDTNGEYLASVSQD-----SVRVWSLAS-GECIHELSSS--GNKFHSCIFHPSYPTLMVIGGYQSLEL 743 (786)
Q Consensus 677 ~~I~sv-----~~spdg~~Lasgs~D-----~I~vwDl~s-~~~i~~l~~~--~~~I~sv~fspdg~~L~sgs~dg~I~I 743 (786)
+.+.+. .|++++.+|++++.+ .|+|||++. .+++..+..+ .+.+......+++.++++|+.|+.|++
T Consensus 210 g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~ 289 (568)
T PTZ00420 210 GGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRY 289 (568)
T ss_pred CCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEE
Confidence 765433 345888898887755 599999995 5566554332 233334444556888999999999999
Q ss_pred EECCCCeEEEEc--ccCCCeEEEEEcCCCC
Q 044075 744 WNMAENKCMTIA--AHDCVISALAQSPVTG 771 (786)
Q Consensus 744 wDl~~~~~~~~~--~h~~~V~slafspdg~ 771 (786)
|++..+....+. .+..++.+++|.|...
T Consensus 290 ~e~~~~~~~~l~~~~s~~p~~g~~f~Pkr~ 319 (568)
T PTZ00420 290 YQHSLGSIRKVNEYKSCSPFRSFGFLPKQI 319 (568)
T ss_pred EEccCCcEEeecccccCCCccceEEccccc
Confidence 999887654333 3567889999999643
No 69
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=6.2e-26 Score=254.21 Aligned_cols=244 Identities=23% Similarity=0.465 Sum_probs=214.5
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcC
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl 580 (786)
.+..+..|.++|..++|+|...++++|+.|-+|+||+.++.+++.++.+|-+.|..+.|++.-.+|+++|.|-+|+||+.
T Consensus 43 li~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNw 122 (1202)
T KOG0292|consen 43 LIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNW 122 (1202)
T ss_pred HHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEec
Confidence 45567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee-----------------------------eE
Q 044075 581 AKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC-----------------------------AR 631 (786)
Q Consensus 581 ~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~-----------------------------~~ 631 (786)
.+.+ ++..+++|...|.|..|+|..+ ++++++-|-+|++||+...+. ..
T Consensus 123 qsr~-~iavltGHnHYVMcAqFhptED-lIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~ 200 (1202)
T KOG0292|consen 123 QSRK-CIAVLTGHNHYVMCAQFHPTED-LIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKH 200 (1202)
T ss_pred cCCc-eEEEEecCceEEEeeccCCccc-eEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeee
Confidence 9877 7999999999999999999765 666999999999999863111 01
Q ss_pred e---ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCc--EEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECC
Q 044075 632 I---SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDR--LTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLA 705 (786)
Q Consensus 632 ~---~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~--~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~ 705 (786)
+ +..++.-++|+|.-..+++|+.|..|++|.....+ .+.+..+|...|.++-|+|..++|++.++| +|+|||+.
T Consensus 201 VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~ 280 (1202)
T KOG0292|consen 201 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMT 280 (1202)
T ss_pred eecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecc
Confidence 1 12356778999999999999999999999987553 455677899999999999999999999999 99999999
Q ss_pred CCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 706 SGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 706 s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
..+.+.+++...+..+.++.+|..+. ++++.|+.+.||.+.
T Consensus 281 kRt~v~tfrrendRFW~laahP~lNL-fAAgHDsGm~VFkle 321 (1202)
T KOG0292|consen 281 KRTSVQTFRRENDRFWILAAHPELNL-FAAGHDSGMIVFKLE 321 (1202)
T ss_pred cccceeeeeccCCeEEEEEecCCcce-eeeecCCceEEEEEc
Confidence 99999999988999999999999884 455566666666665
No 70
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.4e-25 Score=247.79 Aligned_cols=267 Identities=22% Similarity=0.408 Sum_probs=230.2
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecC
Q 044075 513 TCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTG 592 (786)
Q Consensus 513 ~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~ 592 (786)
.-+.|+. ...||+|. ...|++|+..++........+...|+++.|+++|.+|++|..+|.|.|||..+.+. +..+.+
T Consensus 181 nlldWss-~n~laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~-~~~~~~ 257 (484)
T KOG0305|consen 181 NLLDWSS-ANVLAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKK-TRTLRG 257 (484)
T ss_pred hHhhccc-CCeEEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccc-cccccC
Confidence 3456773 44677764 56899999999887776666689999999999999999999999999999988774 666666
Q ss_pred -CCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee----EeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCc
Q 044075 593 -HNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA----RISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDR 667 (786)
Q Consensus 593 -h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~----~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~ 667 (786)
|...|.+++|. ..++.+|+.|+.|.++|++..+.. ..+...+..+.|++++.++++|+.|+.+.|||.....
T Consensus 258 ~h~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~ 334 (484)
T KOG0305|consen 258 SHASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPE 334 (484)
T ss_pred CcCceeEEEecc---CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCcc
Confidence 99999999998 557779999999999999875543 3355677889999999999999999999999998889
Q ss_pred EEEEEecCCCCEEEEEEcC-CCCEEEEEe--CC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEEC--CCeE
Q 044075 668 LTHSFKGHSTEIHSVCWDT-NGEYLASVS--QD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGG--YQSL 741 (786)
Q Consensus 668 ~i~~l~~h~~~I~sv~~sp-dg~~Lasgs--~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~--dg~I 741 (786)
+...+..|...|..++|+| ...+||+|+ .| .|++||+.+++.+..+.. ...|.++.|++..+.|+++.+ ++.|
T Consensus 335 p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt-gsQVcsL~Wsk~~kEi~sthG~s~n~i 413 (484)
T KOG0305|consen 335 PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDT-GSQVCSLIWSKKYKELLSTHGYSENQI 413 (484)
T ss_pred ccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccccc-CCceeeEEEcCCCCEEEEecCCCCCcE
Confidence 9999999999999999999 456778765 45 899999999999988754 589999999999988887754 4589
Q ss_pred EEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 742 ELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 742 ~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.||+..+.+.+ .+.+|...|..++++|||..|++|+.|.++++|+
T Consensus 414 ~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~ 459 (484)
T KOG0305|consen 414 TLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWN 459 (484)
T ss_pred EEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEecc
Confidence 99999887665 6779999999999999999999999999999996
No 71
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=2.5e-25 Score=225.89 Aligned_cols=269 Identities=17% Similarity=0.283 Sum_probs=226.0
Q ss_pred cccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCC--EEEEE
Q 044075 492 ETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNST--QLATS 569 (786)
Q Consensus 492 ~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~--~Lasg 569 (786)
.....+.+.++..+..|.++|+|++.+ +.++|+|+.|-+|+|||+.+.+.+..+-.|.+.|+++.|.++-. .|++|
T Consensus 26 ~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~ 103 (362)
T KOG0294|consen 26 TDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSG 103 (362)
T ss_pred ccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeee
Confidence 344567788888999999999999997 88999999999999999999999999999999999999998664 89999
Q ss_pred eCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCC
Q 044075 570 SFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLG 647 (786)
Q Consensus 570 s~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~ 647 (786)
+.||.|.+|+...- .++..+++|.+.|+.++.||.++ |.++.+.|+.++.||+-.++.-.+.+ .....+.|+|.|.
T Consensus 104 sdDG~i~iw~~~~W-~~~~slK~H~~~Vt~lsiHPS~K-LALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd 181 (362)
T KOG0294|consen 104 SDDGHIIIWRVGSW-ELLKSLKAHKGQVTDLSIHPSGK-LALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGD 181 (362)
T ss_pred cCCCcEEEEEcCCe-EEeeeecccccccceeEecCCCc-eEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCC
Confidence 99999999999876 47899999999999999999877 55588889999999998877554433 4456699999999
Q ss_pred EEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEE-
Q 044075 648 LLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIF- 725 (786)
Q Consensus 648 ~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~f- 725 (786)
+|+++.. ..|-+|.+++..+...+. ....+.|+.|. ++.+|++|.++ .|++||..+..+...+..|...|..+.+
T Consensus 182 ~F~v~~~-~~i~i~q~d~A~v~~~i~-~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~ 258 (362)
T KOG0294|consen 182 HFVVSGR-NKIDIYQLDNASVFREIE-NPKRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASY 258 (362)
T ss_pred EEEEEec-cEEEEEecccHhHhhhhh-ccccceeeeec-CCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEE
Confidence 9988877 568899988776665555 34567788774 56678888888 9999999999999999999999999984
Q ss_pred -eCCCCEEEEEECCCeEEEEECCCC-----eEEEEcccCCCeEEEEEc
Q 044075 726 -HPSYPTLMVIGGYQSLELWNMAEN-----KCMTIAAHDCVISALAQS 767 (786)
Q Consensus 726 -spdg~~L~sgs~dg~I~IwDl~~~-----~~~~~~~h~~~V~slafs 767 (786)
.|++.+|++++.||.|+|||++.. +.+........++|+...
T Consensus 259 ~~~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~~~RltCl~~~ 306 (362)
T KOG0294|consen 259 TNPEHEYLVTASSDGFIKVWDIDMETKKRPTLLAELNTNVRLTCLRVK 306 (362)
T ss_pred ecCCceEEEEeccCceEEEEEccccccCCcceeEEeecCCccceeeeh
Confidence 456789999999999999999876 333444456677777654
No 72
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.94 E-value=1.3e-26 Score=228.20 Aligned_cols=248 Identities=18% Similarity=0.282 Sum_probs=224.8
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
.=+.++.+|.+.|+...++.+....|+++.|-+.+|||.-++..+..+ .|...|..++|+.|.++|++|+.+..+||||
T Consensus 50 dwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf-~hkhivk~~af~~ds~~lltgg~ekllrvfd 128 (334)
T KOG0278|consen 50 DWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSF-EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFD 128 (334)
T ss_pred CcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhh-hhhheeeeEEecccchhhhccchHHHhhhhh
Confidence 457799999999999999999989999999999999999999999888 5888899999999999999999999999999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee--cCCeEEEEEeCCCCEEEEEECCCe
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS--KGGTVQVRFQPRLGLLLAAASENV 657 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~--~~~i~~i~~sp~g~~Ll~gs~dg~ 657 (786)
++..+.....+.+|.+.|..+.|....+.++ ++..|++|++||.+++..+..+ +.++.++.++++|++| +.+..+.
T Consensus 129 ln~p~App~E~~ghtg~Ir~v~wc~eD~~iL-SSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~il-Tia~gss 206 (334)
T KOG0278|consen 129 LNRPKAPPKEISGHTGGIRTVLWCHEDKCIL-SSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRIL-TIAYGSS 206 (334)
T ss_pred ccCCCCCchhhcCCCCcceeEEEeccCceEE-eeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEE-EEecCce
Confidence 9999888889999999999999998777666 6688999999999999887654 5889999999998765 4556689
Q ss_pred EEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEE-ccCCCceEEEEEeCCCCEEEEE
Q 044075 658 VSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHEL-SSSGNKFHSCIFHPSYPTLMVI 735 (786)
Q Consensus 658 I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l-~~~~~~I~sv~fspdg~~L~sg 735 (786)
|.+||..+..+++.++ ....|.+..++|+..++++|++| .++.||..+++.+..+ ++|.++|.|+.|+|+|...++|
T Consensus 207 V~Fwdaksf~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsG 285 (334)
T KOG0278|consen 207 VKFWDAKSFGLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASG 285 (334)
T ss_pred eEEeccccccceeecc-CccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeecc
Confidence 9999999999998887 56779999999999999999999 9999999999988886 8999999999999999999999
Q ss_pred ECCCeEEEEECCCCeE
Q 044075 736 GGYQSLELWNMAENKC 751 (786)
Q Consensus 736 s~dg~I~IwDl~~~~~ 751 (786)
+.||+|+||.+.-++.
T Consensus 286 SEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 286 SEDGTIRLWQTTPGKT 301 (334)
T ss_pred CCCceEEEEEecCCCc
Confidence 9999999999876554
No 73
>PTZ00421 coronin; Provisional
Probab=99.94 E-value=9e-25 Score=249.02 Aligned_cols=262 Identities=15% Similarity=0.229 Sum_probs=206.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeee-------------eecCCCCCCeEEEEEcc-CCCEEEEEeCCC
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTE-------------CTPDDHNHIITDVRFRP-NSTQLATSSFDK 573 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~-------------~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg 573 (786)
|-..|....+++|+..+++++.+..+..|+...+..+ ..+.+|.+.|++++|+| ++.+|++|+.|+
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg 98 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG 98 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence 3345666666777666677666666677765433221 23678999999999999 888999999999
Q ss_pred cEEEEcCCCCc------ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeC
Q 044075 574 TVRIWDAAKPN------FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQP 644 (786)
Q Consensus 574 ~I~VWdl~s~~------~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp 644 (786)
+|+|||+.+.. ..+..+.+|...|.+++|+|++..++++++.|+.|++||+++++....+. ..+.+++|+|
T Consensus 99 tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~sp 178 (493)
T PTZ00421 99 TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNL 178 (493)
T ss_pred EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEEC
Confidence 99999997643 24567889999999999999987788899999999999999887766543 5689999999
Q ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCC-EEEEEEcCCCCEEEEEe----CC-eEEEEECCCCe-eEEEEccC-
Q 044075 645 RLGLLLAAASENVVSIFDVETDRLTHSFKGHSTE-IHSVCWDTNGEYLASVS----QD-SVRVWSLASGE-CIHELSSS- 716 (786)
Q Consensus 645 ~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~-I~sv~~spdg~~Lasgs----~D-~I~vwDl~s~~-~i~~l~~~- 716 (786)
++..|++++.|+.|++||+++++.+..+.+|... +..+.|.+++..|++++ .| .|++||+++.. ++.....+
T Consensus 179 dG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~ 258 (493)
T PTZ00421 179 DGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQ 258 (493)
T ss_pred CCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCC
Confidence 9999999999999999999999999999888765 45678999888877654 35 89999998754 44443333
Q ss_pred CCceEEEEEeCCCCEEEEEE-CCCeEEEEECCCCeEEEEc--ccCCCeEEEEEcCC
Q 044075 717 GNKFHSCIFHPSYPTLMVIG-GYQSLELWNMAENKCMTIA--AHDCVISALAQSPV 769 (786)
Q Consensus 717 ~~~I~sv~fspdg~~L~sgs-~dg~I~IwDl~~~~~~~~~--~h~~~V~slafspd 769 (786)
...+....|++++.+|++++ .|+.|++||+.+++..... .+..++..++|.|.
T Consensus 259 ~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 259 SSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred CCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccc
Confidence 34566677999999999887 5999999999998876432 35567788888874
No 74
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.94 E-value=2.5e-25 Score=230.55 Aligned_cols=246 Identities=19% Similarity=0.331 Sum_probs=210.2
Q ss_pred eeeeEEeecCCCCeEEEEEcCCC---CEEEEEECCCeEEEEEcCCCeee----eecCCCCCCeEEEEEccCCCEEEEEeC
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDG---KLLASAGHDKKVVVWNMENFQTE----CTPDDHNHIITDVRFRPNSTQLATSSF 571 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg---~~Lasgs~Dg~V~IWdl~t~~~~----~~l~~h~~~V~sl~fspdg~~Lasgs~ 571 (786)
-+.+..+.+|.++|.+++|.-.. ..|++++.|.++++|.++.++.. ....+|...|-+|+..+++..+++|+.
T Consensus 134 Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~ 213 (423)
T KOG0313|consen 134 GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSW 213 (423)
T ss_pred CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecc
Confidence 35788899999999988875432 35999999999999998865433 334699999999999999999999999
Q ss_pred CCcEEEEcCCCC------------------------cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC
Q 044075 572 DKTVRIWDAAKP------------------------NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY 627 (786)
Q Consensus 572 Dg~I~VWdl~s~------------------------~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~ 627 (786)
|.+|+||+..+. +.++..+.+|..+|.++.|.+ ...+++++.|.+|+.||+.++
T Consensus 214 D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d--~~v~yS~SwDHTIk~WDletg 291 (423)
T KOG0313|consen 214 DTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD--ATVIYSVSWDHTIKVWDLETG 291 (423)
T ss_pred cceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC--CCceEeecccceEEEEEeecc
Confidence 999999993221 124567789999999999997 456679999999999999998
Q ss_pred eeeEeec--CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC---cEEEEEecCCCCEEEEEEcCCCC-EEEEEeCC-eEE
Q 044075 628 SCARISK--GGTVQVRFQPRLGLLLAAASENVVSIFDVETD---RLTHSFKGHSTEIHSVCWDTNGE-YLASVSQD-SVR 700 (786)
Q Consensus 628 ~~~~~~~--~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~---~~i~~l~~h~~~I~sv~~spdg~-~Lasgs~D-~I~ 700 (786)
.++.... ....++.+++....|++|+.|..|++||.+++ -...+|.+|...|.++.|+|... .|++++.| +++
T Consensus 292 ~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~k 371 (423)
T KOG0313|consen 292 GLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVK 371 (423)
T ss_pred cceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEE
Confidence 8776544 56789999999999999999999999999987 35568889999999999999665 57889999 999
Q ss_pred EEECCCCe-eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 701 VWSLASGE-CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 701 vwDl~s~~-~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
+||+++.+ ++..+..|...|.++.|.. +.+|++|+.|.+|+|+.-.
T Consensus 372 lWDvRS~k~plydI~~h~DKvl~vdW~~-~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 372 LWDVRSTKAPLYDIAGHNDKVLSVDWNE-GGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred EEEeccCCCcceeeccCCceEEEEeccC-CceEEeccCcceEEEeccc
Confidence 99999987 9999999999999999974 5689999999999998643
No 75
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=6.6e-26 Score=229.15 Aligned_cols=286 Identities=18% Similarity=0.328 Sum_probs=244.6
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
.+..++.+.||.+.|+.++.......+.+++.|.+.+||.++++.++..+.+|.+.|++|.|++.+.++++++.|++..|
T Consensus 137 ~~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHI 216 (481)
T KOG0300|consen 137 KFRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHI 216 (481)
T ss_pred eEeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHH
Confidence 56778889999999999999888889999999999999999999999999999999999999999999999999999999
Q ss_pred EcC------CCC---------------------------------cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCc
Q 044075 578 WDA------AKP---------------------------------NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSE 618 (786)
Q Consensus 578 Wdl------~s~---------------------------------~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~ 618 (786)
|.. ..+ ..++..+.+|...|.+..|...+..++ +++.|.+
T Consensus 217 W~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~v-TaSWDRT 295 (481)
T KOG0300|consen 217 WKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMV-TASWDRT 295 (481)
T ss_pred HHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceee-eeecccc
Confidence 951 110 023456788999999999998777666 9999999
Q ss_pred EEEEeCCCCeeeEeecCC---eEEEEEeCCCCEEEEEECCCeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCCCCEEEEE
Q 044075 619 IRFWNLSQYSCARISKGG---TVQVRFQPRLGLLLAAASENVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTNGEYLASV 694 (786)
Q Consensus 619 I~iwDl~~~~~~~~~~~~---i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spdg~~Lasg 694 (786)
..+||+++++.+..+.++ .+.++-+|..+.+++.+.|.+.++||++.. ..+..|.+|...|+++.|..+ ..+++|
T Consensus 296 AnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~d-d~vVSg 374 (481)
T KOG0300|consen 296 ANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTD-DRVVSG 374 (481)
T ss_pred ceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecC-Cceeec
Confidence 999999999998887754 466778999999999999999999999854 567789999999999999765 458889
Q ss_pred eCC-eEEEEECCCC-eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEE-----EcccCCCeEEEEEc
Q 044075 695 SQD-SVRVWSLASG-ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMT-----IAAHDCVISALAQS 767 (786)
Q Consensus 695 s~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~-----~~~h~~~V~slafs 767 (786)
++| +|+|||+++. .++.++.. ..++..++++..++.|+.--.+..|++||+....+.. ..+|...|+|++|.
T Consensus 375 SDDrTvKvWdLrNMRsplATIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~ 453 (481)
T KOG0300|consen 375 SDDRTVKVWDLRNMRSPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWL 453 (481)
T ss_pred CCCceEEEeeeccccCcceeeec-CCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeecc
Confidence 999 9999999975 45666654 5788999999888877777777799999999877653 34799999999998
Q ss_pred CCCC--EEEEEeCCCcEEEeC
Q 044075 768 PVTG--MVASASHDKSVKIWK 786 (786)
Q Consensus 768 pdg~--~LaSgs~DG~I~IWd 786 (786)
.+.. -|++|+-|..+.-|+
T Consensus 454 eehp~cnLftcGFDR~v~gW~ 474 (481)
T KOG0300|consen 454 EEHPACNLFTCGFDRMVAGWK 474 (481)
T ss_pred ccCcccccccccccceeeeeE
Confidence 6543 578999999998885
No 76
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=2.8e-26 Score=250.85 Aligned_cols=268 Identities=21% Similarity=0.393 Sum_probs=235.8
Q ss_pred CCCCEEEEEECCCeEEEEEcCCCe------eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc-ceeeeec
Q 044075 519 SDGKLLASAGHDKKVVVWNMENFQ------TECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN-FCLQTYT 591 (786)
Q Consensus 519 pdg~~Lasgs~Dg~V~IWdl~t~~------~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~-~~~~~~~ 591 (786)
|.+++|++||.||.|++|++.... ....++.|.+.|.++....+++.|++++.|-+|++|+..... .+..++.
T Consensus 35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir 114 (735)
T KOG0308|consen 35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIR 114 (735)
T ss_pred CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhh
Confidence 367789999999999999987432 366788999999999999999999999999999999998764 6788999
Q ss_pred CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee--eE------------eecCCeEEEEEeCCCCEEEEEECCCe
Q 044075 592 GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC--AR------------ISKGGTVQVRFQPRLGLLLAAASENV 657 (786)
Q Consensus 592 ~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~--~~------------~~~~~i~~i~~sp~g~~Ll~gs~dg~ 657 (786)
.|...|.|+++....+.++++|+-|+.|.+||++++.. +. ..+..+.+++.++.+..|+.|+.++.
T Consensus 115 ~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~ 194 (735)
T KOG0308|consen 115 THKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKD 194 (735)
T ss_pred cccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccc
Confidence 99999999999666788999999999999999997622 11 12356788899999999999999999
Q ss_pred EEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEE
Q 044075 658 VSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 658 I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
|++||.++.+.+..+.+|...|.++..++||..+++++.| +|++||+...+|+.++..|...|+++..+|+-.++++|+
T Consensus 195 lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~ 274 (735)
T KOG0308|consen 195 LRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGG 274 (735)
T ss_pred eEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecC
Confidence 9999999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred CCCeEEEEECCC-CeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 737 GYQSLELWNMAE-NKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 737 ~dg~I~IwDl~~-~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.|+.|+.=|+++ .++..+.....+|..+..+...+-+-+++.|+.|+-|.
T Consensus 275 rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~ 325 (735)
T KOG0308|consen 275 RDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWK 325 (735)
T ss_pred CCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecC
Confidence 999999999998 45556666777888888776555557788899999884
No 77
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=5.5e-26 Score=224.52 Aligned_cols=237 Identities=20% Similarity=0.374 Sum_probs=203.5
Q ss_pred CCCeEEEEEcCC-CCEEEEEECCCeEEEEEcC-CCeeeeecCCCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEcCCCCcc
Q 044075 509 SSKVTCCHFSSD-GKLLASAGHDKKVVVWNME-NFQTECTPDDHNHIITDVRFRP-NSTQLATSSFDKTVRIWDAAKPNF 585 (786)
Q Consensus 509 ~~~V~~lafSpd-g~~Lasgs~Dg~V~IWdl~-t~~~~~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s~~~ 585 (786)
.+.+..++|+++ ...+++++.||+++|||+. ..+++..+++|...|.++.|++ +...+++++.|++|++|+...+.
T Consensus 60 ~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~- 138 (311)
T KOG0277|consen 60 EDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN- 138 (311)
T ss_pred ccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCc-
Confidence 467999999994 5578888999999999965 3567889999999999999998 56678889999999999998876
Q ss_pred eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe---eeEeecCCeEEEEEeCC-CCEEEEEECCCeEEEE
Q 044075 586 CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS---CARISKGGTVQVRFQPR-LGLLLAAASENVVSIF 661 (786)
Q Consensus 586 ~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~---~~~~~~~~i~~i~~sp~-g~~Ll~gs~dg~I~iw 661 (786)
.+.++.+|...|....|+|....+|++++.|+++++||++..- .+..+...+.++.|+.. ...+++|+.|+.|++|
T Consensus 139 Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~w 218 (311)
T KOG0277|consen 139 SVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGW 218 (311)
T ss_pred ceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEE
Confidence 5888999999999999999999999999999999999998632 23344467888999764 4568888889999999
Q ss_pred EcCCC-cEEEEEecCCCCEEEEEEcCC-CCEEEEEeCC-eEEEEECCCC-eeEEEEccCCCceEEEEEeC-CCCEEEEEE
Q 044075 662 DVETD-RLTHSFKGHSTEIHSVCWDTN-GEYLASVSQD-SVRVWSLASG-ECIHELSSSGNKFHSCIFHP-SYPTLMVIG 736 (786)
Q Consensus 662 D~~t~-~~i~~l~~h~~~I~sv~~spd-g~~Lasgs~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~fsp-dg~~L~sgs 736 (786)
|++.. .++..+.+|.-.|..|+|+|. ..+|++++.| +++|||.... .++.+...|..-+..+.|++ +..++++++
T Consensus 219 Dir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~g 298 (311)
T KOG0277|consen 219 DIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTG 298 (311)
T ss_pred ehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecc
Confidence 99986 678889999999999999996 4688999999 9999999854 56667777888888888887 456899999
Q ss_pred CCCeEEEEEC
Q 044075 737 GYQSLELWNM 746 (786)
Q Consensus 737 ~dg~I~IwDl 746 (786)
-|+.++||+.
T Consensus 299 WDe~l~Vw~p 308 (311)
T KOG0277|consen 299 WDELLYVWNP 308 (311)
T ss_pred cccceeeecc
Confidence 9999999984
No 78
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=9.3e-25 Score=220.62 Aligned_cols=267 Identities=16% Similarity=0.263 Sum_probs=215.3
Q ss_pred CCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcCCC-ee-eeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc
Q 044075 508 SSSKVTCCHFSS-DGKLLASAGHDKKVVVWNMENF-QT-ECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN 584 (786)
Q Consensus 508 H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t~-~~-~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~ 584 (786)
..+.|.+|+||| ...+|++++.||+||+|++... .. -+....|.++|.+++|+.||..+++|+.|+.+++||+.++.
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q 105 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ 105 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC
Confidence 457899999999 5667779999999999999862 22 24457899999999999999999999999999999999986
Q ss_pred ceeeeecCCCCCeEEEEEecCCC-eEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEc
Q 044075 585 FCLQTYTGHNNHVMSLDFHPKKN-DLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDV 663 (786)
Q Consensus 585 ~~~~~~~~h~~~V~sl~~sp~g~-~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~ 663 (786)
...+..|..+|.++.|.+... .++++|+.|.+|++||.+....+....-+..+-+..-....+++++.+..|.+|++
T Consensus 106 --~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL 183 (347)
T KOG0647|consen 106 --VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNL 183 (347)
T ss_pred --eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEc
Confidence 777888999999999986544 47789999999999999988877766654444444455567899999999999999
Q ss_pred CCCcEEE-EEe-cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC--eeEEEEccCC---------CceEEEEEeCCC
Q 044075 664 ETDRLTH-SFK-GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG--ECIHELSSSG---------NKFHSCIFHPSY 729 (786)
Q Consensus 664 ~t~~~i~-~l~-~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~--~~i~~l~~~~---------~~I~sv~fspdg 729 (786)
+.+.... ... .-.-.+.||+...|....+.|+-+ .+.|..+..+ +.-.+|+.|. ..|.+++|+|..
T Consensus 184 ~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~h 263 (347)
T KOG0647|consen 184 ENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVH 263 (347)
T ss_pred CCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeeccc
Confidence 8763222 111 134457899988888878888877 8888877765 4445566664 247789999999
Q ss_pred CEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEE
Q 044075 730 PTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 730 ~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSg 776 (786)
..|+++|.||++.+||-.....+ ....|..+|+|++|+.+|.++|-+
T Consensus 264 gtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 264 GTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred ceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEE
Confidence 99999999999999998776544 567899999999999999977643
No 79
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=1.3e-23 Score=203.96 Aligned_cols=287 Identities=17% Similarity=0.265 Sum_probs=234.9
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC---------------eeeeecCCCCCCeEEEEEccC
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF---------------QTECTPDDHNHIITDVRFRPN 562 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~---------------~~~~~l~~h~~~V~sl~fspd 562 (786)
.|+.+..+. .+..|.+++|+|.|.+.|+|+...+++|.-.... -..+.-+.|.+.|+|++|+|+
T Consensus 22 ~f~~i~~l~-dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~ 100 (350)
T KOG0641|consen 22 HFEAINILE-DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPC 100 (350)
T ss_pred ceEEEEEec-chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCc
Confidence 345555554 4567999999999999999999999998854321 111233679999999999999
Q ss_pred CCEEEEEeCCCcEEEEcCCCCcc----eeeeecCCCCCeEEEEEecC---CCeEEEEEc-CCCcEEEEeCCCCeeeEeec
Q 044075 563 STQLATSSFDKTVRIWDAAKPNF----CLQTYTGHNNHVMSLDFHPK---KNDLFCSCD-GNSEIRFWNLSQYSCARISK 634 (786)
Q Consensus 563 g~~Lasgs~Dg~I~VWdl~s~~~----~~~~~~~h~~~V~sl~~sp~---g~~ll~sgs-~Dg~I~iwDl~~~~~~~~~~ 634 (786)
|.+|++|+.|++|++.-.+.... .-..+.-|.+.|..++|..+ +..++++++ .|..|++-|...+.......
T Consensus 101 geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~s 180 (350)
T KOG0641|consen 101 GELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALS 180 (350)
T ss_pred cCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeec
Confidence 99999999999999987654331 23456779999999999643 455666654 57788888888887776665
Q ss_pred CCeEEE--EEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec-------CCCCEEEEEEcCCCCEEEEEeCC-eEEEEEC
Q 044075 635 GGTVQV--RFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG-------HSTEIHSVCWDTNGEYLASVSQD-SVRVWSL 704 (786)
Q Consensus 635 ~~i~~i--~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~-------h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl 704 (786)
++.-.+ -++-++-.+++|+.|.+|++||++...++..+.. ..+.|.+++..|.|++|++|..| ...+||+
T Consensus 181 ghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydi 260 (350)
T KOG0641|consen 181 GHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDI 260 (350)
T ss_pred CCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEe
Confidence 443222 2455678899999999999999999888887653 23679999999999999999999 8999999
Q ss_pred CCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC-----eEEEEcccCCCeEEEEEcCCCCEEEEEeCC
Q 044075 705 ASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN-----KCMTIAAHDCVISALAQSPVTGMVASASHD 779 (786)
Q Consensus 705 ~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~-----~~~~~~~h~~~V~slafspdg~~LaSgs~D 779 (786)
+.+..+..+..|...|.++.|+|...|+++++.|..|++-|+... ..+.+..|...+..+.|+|..-.+++.+.|
T Consensus 261 rg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssad 340 (350)
T KOG0641|consen 261 RGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSAD 340 (350)
T ss_pred eCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCc
Confidence 999999999999999999999999999999999999999998754 234667899999999999999899999999
Q ss_pred CcEEEe
Q 044075 780 KSVKIW 785 (786)
Q Consensus 780 G~I~IW 785 (786)
.++.+|
T Consensus 341 kt~tlw 346 (350)
T KOG0641|consen 341 KTATLW 346 (350)
T ss_pred ceEEEe
Confidence 999999
No 80
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=5.9e-25 Score=214.95 Aligned_cols=247 Identities=23% Similarity=0.332 Sum_probs=218.7
Q ss_pred cccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCC
Q 044075 494 SKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDK 573 (786)
Q Consensus 494 ~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg 573 (786)
.+...-..++++.+|...|..++.+.|...|++|+.|..|.+||+++++..+.+.+|...|+.+.|+.+...+++|+.|.
T Consensus 44 WNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~ 123 (307)
T KOG0316|consen 44 WNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDS 123 (307)
T ss_pred ecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccc
Confidence 34445568899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCCc-ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe-ecCCeEEEEEeCCCCEEEE
Q 044075 574 TVRIWDAAKPN-FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI-SKGGTVQVRFQPRLGLLLA 651 (786)
Q Consensus 574 ~I~VWdl~s~~-~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~-~~~~i~~i~~sp~g~~Ll~ 651 (786)
+|++||.++.. .+++.+......|.+|... .+.+++|+.||+++.||++.+..... +..++++++|+++++..++
T Consensus 124 s~r~wDCRS~s~ePiQildea~D~V~Si~v~---~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La 200 (307)
T KOG0316|consen 124 SVRLWDCRSRSFEPIQILDEAKDGVSSIDVA---EHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLA 200 (307)
T ss_pred eeEEEEcccCCCCccchhhhhcCceeEEEec---ccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEE
Confidence 99999998654 3577788888999999987 45666999999999999999887654 4578999999999999999
Q ss_pred EECCCeEEEEEcCCCcEEEEEecCCCCE--EEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCc-eEEEEEeC
Q 044075 652 AASENVVSIFDVETDRLTHSFKGHSTEI--HSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNK-FHSCIFHP 727 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~l~~h~~~I--~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~-I~sv~fsp 727 (786)
++-|++|++.|-++++++..+++|...- ..++++.....+++|++| .|++||+...+.+..+..+... |.++.++|
T Consensus 201 ~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp 280 (307)
T KOG0316|consen 201 SSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHP 280 (307)
T ss_pred eeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeeccc
Confidence 9999999999999999999999987654 356777888899999999 9999999999999999888777 89999999
Q ss_pred CCCEEEEEECCCeEEEE
Q 044075 728 SYPTLMVIGGYQSLELW 744 (786)
Q Consensus 728 dg~~L~sgs~dg~I~Iw 744 (786)
.-..|++++..+ +.+|
T Consensus 281 ~~~~f~~A~~~~-~~~~ 296 (307)
T KOG0316|consen 281 TMDDFITATGHG-DLFW 296 (307)
T ss_pred CccceeEecCCc-eece
Confidence 988888777654 4444
No 81
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.93 E-value=5.3e-25 Score=218.36 Aligned_cols=239 Identities=23% Similarity=0.424 Sum_probs=212.5
Q ss_pred eecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce-eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEe
Q 044075 545 CTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC-LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWN 623 (786)
Q Consensus 545 ~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~-~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwD 623 (786)
+.+.+|...|.+|+|+.+|..|++|+.|++++||+++..... .....+|.+.|..++|+|..+.+|++++.|.+|++||
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD 93 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence 456789999999999999999999999999999999876432 2246789999999999999999999999999999999
Q ss_pred CCCCeeeEeec--CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC-CeEE
Q 044075 624 LSQYSCARISK--GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ-DSVR 700 (786)
Q Consensus 624 l~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~-D~I~ 700 (786)
++..++..... +....+.|+|+|.+++++..|..|.++|.++.+.....+ ....+..++|+.++.+|+.... ++|.
T Consensus 94 ~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~v~ 172 (313)
T KOG1407|consen 94 IRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGCVE 172 (313)
T ss_pred eccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEecCCceEE
Confidence 99999876554 667889999999999999999999999999988877666 5667888999877776665554 5999
Q ss_pred EEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCC
Q 044075 701 VWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHD 779 (786)
Q Consensus 701 vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~D 779 (786)
|.....-+++..+..|.....|+.|+|+|+||++|+.|-.+-+||+.+--|. .+..++-+|..|.|+.||++||+|++|
T Consensus 173 ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSED 252 (313)
T KOG1407|consen 173 ILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASED 252 (313)
T ss_pred EEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCcc
Confidence 9999999999999999999999999999999999999999999999998877 566899999999999999999999999
Q ss_pred CcEEE
Q 044075 780 KSVKI 784 (786)
Q Consensus 780 G~I~I 784 (786)
..|-|
T Consensus 253 h~IDI 257 (313)
T KOG1407|consen 253 HFIDI 257 (313)
T ss_pred ceEEe
Confidence 88755
No 82
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=3.4e-24 Score=217.38 Aligned_cols=281 Identities=19% Similarity=0.298 Sum_probs=210.6
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee--ec--CCCCCCeEEEEEccCCCEEEEE-eCCCcE
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC--TP--DDHNHIITDVRFRPNSTQLATS-SFDKTV 575 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~--~l--~~h~~~V~sl~fspdg~~Lasg-s~Dg~I 575 (786)
.+..|++|.+.|+|++|+.||++||+++.|+.|+||+++++.... .+ .-.-+.-+.+.|.||.+-+++. -...++
T Consensus 78 ~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l 157 (420)
T KOG2096|consen 78 NVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKL 157 (420)
T ss_pred hhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEE
Confidence 356789999999999999999999999999999999998753221 11 1112346889999998765554 445679
Q ss_pred EEEcCCCCc---cee--------eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEE
Q 044075 576 RIWDAAKPN---FCL--------QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVR 641 (786)
Q Consensus 576 ~VWdl~s~~---~~~--------~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~ 641 (786)
++|.+...+ ... ..-..|.-.|..+-... +..++++|+.|..|.+|+++ +..+.... ......+
T Consensus 158 ~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~-~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aa 235 (420)
T KOG2096|consen 158 CVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAG-NAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAA 235 (420)
T ss_pred EEEEeeecccCCCCcccccccccccchhcccceEEEeecC-CceEEEEecCCCcEEEEecC-Cceeeeecccccccccee
Confidence 999765322 111 11223555566665553 45566799999999999999 55554443 3456688
Q ss_pred EeCCCCEEEEEECCCeEEEEEcCC---C-----cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC------
Q 044075 642 FQPRLGLLLAAASENVVSIFDVET---D-----RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS------ 706 (786)
Q Consensus 642 ~sp~g~~Ll~gs~dg~I~iwD~~t---~-----~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s------ 706 (786)
++|+|+++++++.--.|++|.+-- | ..+..+++|...|..++|+++.+.+++.+.| +++|||+.-
T Consensus 236 vSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~q 315 (420)
T KOG2096|consen 236 VSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQ 315 (420)
T ss_pred eCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCC
Confidence 999999999999999999998642 2 3466788999999999999999999999999 999999862
Q ss_pred -CeeEEEE----ccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE--EEcccCCCeEEEEEcCCCCEEEEEeCC
Q 044075 707 -GECIHEL----SSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM--TIAAHDCVISALAQSPVTGMVASASHD 779 (786)
Q Consensus 707 -~~~i~~l----~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~--~~~~h~~~V~slafspdg~~LaSgs~D 779 (786)
.+.+++. ...++.-..+..+|.+..|++... ..|.+|..++++.. ....|...|++|+|+++|++++||+ |
T Consensus 316 Dpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~g-s~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-d 393 (420)
T KOG2096|consen 316 DPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFG-SDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-D 393 (420)
T ss_pred CchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecC-CceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-c
Confidence 2223222 122344458999999997766554 47999999988766 2347999999999999999999997 5
Q ss_pred CcEEEe
Q 044075 780 KSVKIW 785 (786)
Q Consensus 780 G~I~IW 785 (786)
..++|+
T Consensus 394 r~vrv~ 399 (420)
T KOG2096|consen 394 RYVRVI 399 (420)
T ss_pred eeeeee
Confidence 677764
No 83
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=1.2e-24 Score=245.70 Aligned_cols=240 Identities=16% Similarity=0.327 Sum_probs=198.7
Q ss_pred eeecC-CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC--------------------------------Cc------
Q 044075 544 ECTPD-DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK--------------------------------PN------ 584 (786)
Q Consensus 544 ~~~l~-~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s--------------------------------~~------ 584 (786)
...+. .|.+.|+++.|++||+|||+|+.|+.|+||.+.. ..
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~ 338 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS 338 (712)
T ss_pred eeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence 34455 8999999999999999999999999999997654 00
Q ss_pred ---------------------ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--CCeEEEE
Q 044075 585 ---------------------FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--GGTVQVR 641 (786)
Q Consensus 585 ---------------------~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~~i~~i~ 641 (786)
.++..+.+|...|.+|.|+. +.+|++++-|.+|++|++...+|++++. .-++||+
T Consensus 339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVa 416 (712)
T KOG0283|consen 339 SRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVA 416 (712)
T ss_pred cccccCCccccCCCccccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcceeeEEecCCeeEEEE
Confidence 12344678999999999995 3456699999999999999999988765 7789999
Q ss_pred EeC-CCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC---
Q 044075 642 FQP-RLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS--- 716 (786)
Q Consensus 642 ~sp-~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~--- 716 (786)
|+| |.++|++|+-|+.|+||++...+.+.-...+ .-|+++||.|||++.++|+.+ .+++|++...+....+..+
T Consensus 417 FnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~-~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~ 495 (712)
T KOG0283|consen 417 FNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLR-DLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHN 495 (712)
T ss_pred ecccCCCcEeecccccceEEeecCcCeeEeehhhh-hhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeecc
Confidence 999 5689999999999999999988777666544 789999999999999999999 9999999987765444321
Q ss_pred -----CCceEEEEEeCCCC-EEEEEECCCeEEEEECCCCeEE-EEccc--CCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 717 -----GNKFHSCIFHPSYP-TLMVIGGYQSLELWNMAENKCM-TIAAH--DCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 717 -----~~~I~sv~fspdg~-~L~sgs~dg~I~IwDl~~~~~~-~~~~h--~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
...|+.+.|.|... .+++.+.|..|+|||.++..++ .+.++ ...=....|+.||++|+++++|..|+||+
T Consensus 496 ~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~ 574 (712)
T KOG0283|consen 496 KKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWK 574 (712)
T ss_pred CccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEe
Confidence 23799999998654 5999999999999999887765 34433 22345678899999999999999999996
No 84
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.93 E-value=5.7e-23 Score=219.43 Aligned_cols=262 Identities=12% Similarity=0.114 Sum_probs=207.5
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEE-EEEeCCCcEEEEcCCCCcceeeeecCCCCCeEE
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQL-ATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMS 599 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~L-asgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~s 599 (786)
+.++++++.|+.|++||+.+++.+..+..+. .+.+++|+|++..+ ++++.++.|++||+.+++. ...+..+. .+..
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~~~-~~~~ 77 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEV-IGTLPSGP-DPEL 77 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcE-EEeccCCC-CccE
Confidence 3578899999999999999999888887654 46789999999876 5667789999999988763 44444443 3578
Q ss_pred EEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECCC-eEEEEEcCCCcEEEEEecCC
Q 044075 600 LDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASEN-VVSIFDVETDRLTHSFKGHS 676 (786)
Q Consensus 600 l~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~dg-~I~iwD~~t~~~i~~l~~h~ 676 (786)
++|+|+++.++++++.++.|++||+.+.+.+..+. ..+..++|+|++..++++..++ .+.+||.++++.+..+. ..
T Consensus 78 ~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~-~~ 156 (300)
T TIGR03866 78 FALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVL-VD 156 (300)
T ss_pred EEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEE-cC
Confidence 89999999888788889999999999887766554 3467899999999999988765 57788999887766554 33
Q ss_pred CCEEEEEEcCCCCEEEEEe-CC-eEEEEECCCCeeEEEEccCC-------CceEEEEEeCCCCEEEEE-ECCCeEEEEEC
Q 044075 677 TEIHSVCWDTNGEYLASVS-QD-SVRVWSLASGECIHELSSSG-------NKFHSCIFHPSYPTLMVI-GGYQSLELWNM 746 (786)
Q Consensus 677 ~~I~sv~~spdg~~Lasgs-~D-~I~vwDl~s~~~i~~l~~~~-------~~I~sv~fspdg~~L~sg-s~dg~I~IwDl 746 (786)
..+.+++|++++.+|++++ .+ .|++||+++++.+..+..+. .....++|+|++++++++ +.++.|.+||+
T Consensus 157 ~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~ 236 (300)
T TIGR03866 157 QRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDA 236 (300)
T ss_pred CCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEEC
Confidence 4567899999999886554 45 99999999998877664321 123468899999986654 45668999999
Q ss_pred CCCeEEEEcccCCCeEEEEEcCCCCEEEEE-eCCCcEEEeC
Q 044075 747 AENKCMTIAAHDCVISALAQSPVTGMVASA-SHDKSVKIWK 786 (786)
Q Consensus 747 ~~~~~~~~~~h~~~V~slafspdg~~LaSg-s~DG~I~IWd 786 (786)
.+++......+...+.+++|+|++++|+++ +.+|.|+|||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d 277 (300)
T TIGR03866 237 KTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVID 277 (300)
T ss_pred CCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEE
Confidence 988877655566789999999999999886 4689999997
No 85
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.93 E-value=3.3e-25 Score=224.56 Aligned_cols=246 Identities=23% Similarity=0.411 Sum_probs=218.6
Q ss_pred ceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC-CCCCCeEEEEEccCCCEEEEEeCCCcE
Q 044075 497 FSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD-DHNHIITDVRFRPNSTQLATSSFDKTV 575 (786)
Q Consensus 497 ~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~-~h~~~V~sl~fspdg~~Lasgs~Dg~I 575 (786)
+.+..--.+--|...|.|+.||.|...||+|+.||.|+||.+.++.+++.+. .|+..|+|+.|+.|+..+++++.|.+|
T Consensus 251 LkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tv 330 (508)
T KOG0275|consen 251 LKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTV 330 (508)
T ss_pred hhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceE
Confidence 3444444555688999999999999999999999999999999999999996 899999999999999999999999999
Q ss_pred EEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC-----CeEEEEEeCC-CCEE
Q 044075 576 RIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKG-----GTVQVRFQPR-LGLL 649 (786)
Q Consensus 576 ~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~-----~i~~i~~sp~-g~~L 649 (786)
+|.-+.+++ +++.+.+|.+.|+...|.++|.+++ +++.||+|++|+..+.+|+..++. .+..+..-|. -..+
T Consensus 331 RiHGlKSGK-~LKEfrGHsSyvn~a~ft~dG~~ii-saSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~ 408 (508)
T KOG0275|consen 331 RIHGLKSGK-CLKEFRGHSSYVNEATFTDDGHHII-SASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHF 408 (508)
T ss_pred EEeccccch-hHHHhcCccccccceEEcCCCCeEE-EecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceE
Confidence 999999987 7899999999999999999999887 999999999999999999887763 4455555554 4678
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEec---CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEE
Q 044075 650 LAAASENVVSIFDVETDRLTHSFKG---HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIF 725 (786)
Q Consensus 650 l~gs~dg~I~iwD~~t~~~i~~l~~---h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~f 725 (786)
+++...++|+|.++. +..++++.. ..+...+++.+|.|.++++.++| .++.|.+.+|+..+++..|+..+..++-
T Consensus 409 iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~H 487 (508)
T KOG0275|consen 409 IVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTH 487 (508)
T ss_pred EEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeeccccccccccc
Confidence 888889999999986 677777763 34567778889999999999999 9999999999999999999999999999
Q ss_pred eCCCCEEEEEECCCeEEEEE
Q 044075 726 HPSYPTLMVIGGYQSLELWN 745 (786)
Q Consensus 726 spdg~~L~sgs~dg~I~IwD 745 (786)
+|..+.|++-+.||.+++|.
T Consensus 488 HPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 488 HPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred CcccchhhhhcccchhhhcC
Confidence 99999999999999999995
No 86
>PTZ00421 coronin; Provisional
Probab=99.93 E-value=2.8e-23 Score=236.80 Aligned_cols=242 Identities=14% Similarity=0.265 Sum_probs=189.6
Q ss_pred EeecCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcCCC-------eeeeecCCCCCCeEEEEEccCC-CEEEEEeCCCc
Q 044075 504 SIRKSSSKVTCCHFSS-DGKLLASAGHDKKVVVWNMENF-------QTECTPDDHNHIITDVRFRPNS-TQLATSSFDKT 574 (786)
Q Consensus 504 ~l~~H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t~-------~~~~~l~~h~~~V~sl~fspdg-~~Lasgs~Dg~ 574 (786)
.+.+|.+.|++++|+| ++.+||+|+.|++|+|||+.+. +.+..+.+|...|.+|+|+|++ ++|++++.|++
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 4779999999999999 8899999999999999999764 3466788999999999999975 69999999999
Q ss_pred EEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC----eEEEEEeCCCCEEE
Q 044075 575 VRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG----TVQVRFQPRLGLLL 650 (786)
Q Consensus 575 I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~----i~~i~~sp~g~~Ll 650 (786)
|+|||+.++. ....+.+|...|.+++|+|++. ++++++.|+.|++||+++++.+.....+ ...+.|.+++..++
T Consensus 150 VrIWDl~tg~-~~~~l~~h~~~V~sla~spdG~-lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~iv 227 (493)
T PTZ00421 150 VNVWDVERGK-AVEVIKCHSDQITSLEWNLDGS-LLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLII 227 (493)
T ss_pred EEEEECCCCe-EEEEEcCCCCceEEEEEECCCC-EEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEE
Confidence 9999999876 5677888999999999999887 4558999999999999998876655422 34677888888887
Q ss_pred EEE----CCCeEEEEEcCCCc-EEEEEec-CCCCEEEEEEcCCCCEEEEEeC-C-eEEEEECCCCeeEEEEcc-CCCceE
Q 044075 651 AAA----SENVVSIFDVETDR-LTHSFKG-HSTEIHSVCWDTNGEYLASVSQ-D-SVRVWSLASGECIHELSS-SGNKFH 721 (786)
Q Consensus 651 ~gs----~dg~I~iwD~~t~~-~i~~l~~-h~~~I~sv~~spdg~~Lasgs~-D-~I~vwDl~s~~~i~~l~~-~~~~I~ 721 (786)
+++ .|+.|++||+++.. ++..... +...+....|++++.+|++++. | .|++||+.+++.+..... +..++.
T Consensus 228 t~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~ 307 (493)
T PTZ00421 228 TLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHK 307 (493)
T ss_pred EEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCc
Confidence 765 37899999998764 4443332 3345666789999999988874 6 999999999987766543 345678
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEECCCC
Q 044075 722 SCIFHPSYPTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 722 sv~fspdg~~L~sgs~dg~I~IwDl~~~ 749 (786)
.++|.|.-. +-...-...++|.+...
T Consensus 308 g~~~~pk~~--~dv~~~Ei~r~~~l~~~ 333 (493)
T PTZ00421 308 GLCMMPKWS--LDTRKCEIARFYALTYH 333 (493)
T ss_pred ceEeccccc--ccccceeeeEEEEecCC
Confidence 888888532 11111123456666544
No 87
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=7.8e-24 Score=215.08 Aligned_cols=256 Identities=18% Similarity=0.358 Sum_probs=211.1
Q ss_pred EEEEECCCeEEEEEcC------------CCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeec
Q 044075 524 LASAGHDKKVVVWNME------------NFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYT 591 (786)
Q Consensus 524 Lasgs~Dg~V~IWdl~------------t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~ 591 (786)
|++|++...|.-+++. +...+..+..|.++|++++.+ +.++|+|+.|.+|+|||+.... ....+.
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~-qlg~ll 80 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRK-QLGILL 80 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchh-hhccee
Confidence 5666666666666554 223456678899999999986 8999999999999999999876 466777
Q ss_pred CCCCCeEEEEEecCCC--eEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC
Q 044075 592 GHNNHVMSLDFHPKKN--DLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETD 666 (786)
Q Consensus 592 ~h~~~V~sl~~sp~g~--~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~ 666 (786)
.|.+.|+++.|.+.-. +|+ +|+.||.|.+|+....+++..++ +.++.++++|.++.-++.+.|+.++.||+-.+
T Consensus 81 ~HagsitaL~F~~~~S~shLl-S~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~G 159 (362)
T KOG0294|consen 81 SHAGSITALKFYPPLSKSHLL-SGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRG 159 (362)
T ss_pred ccccceEEEEecCCcchhhee-eecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcC
Confidence 8999999999987654 555 99999999999999988776654 67899999999999999999999999999998
Q ss_pred cEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 044075 667 RLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNM 746 (786)
Q Consensus 667 ~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl 746 (786)
+.-..+.- ...-+.|.|+|.|.+|+.+..+.|-||.+.+.....++... ..+.++.|. ++.+|++|+.++.|.+||.
T Consensus 160 r~a~v~~L-~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~-~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ 236 (362)
T KOG0294|consen 160 RVAFVLNL-KNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENP-KRILCATFL-DGSELLVGGDNEWISLKDT 236 (362)
T ss_pred ccceeecc-CCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhcc-ccceeeeec-CCceEEEecCCceEEEecc
Confidence 76665542 22334499999999999999999999999887766665443 456666665 5568999999999999999
Q ss_pred CCCeEE-EEcccCCCeEEEEE--cCCCCEEEEEeCCCcEEEeC
Q 044075 747 AENKCM-TIAAHDCVISALAQ--SPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 747 ~~~~~~-~~~~h~~~V~slaf--spdg~~LaSgs~DG~I~IWd 786 (786)
++..+. .+.+|...|.++.+ .|++.+|+|+|.||.|+|||
T Consensus 237 ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd 279 (362)
T KOG0294|consen 237 DSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWD 279 (362)
T ss_pred CCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEE
Confidence 987665 67799999999985 35678999999999999997
No 88
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.93 E-value=8.6e-25 Score=228.64 Aligned_cols=241 Identities=23% Similarity=0.427 Sum_probs=212.9
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
.+.+.+|.+..+.|+.+.|.++++++++++.|+.+++|+++......++.+|.+.|+++.|......+++|+.|.+|++|
T Consensus 209 ~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~W 288 (459)
T KOG0288|consen 209 SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLW 288 (459)
T ss_pred hhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhh
Confidence 55778899999999999999999999999999999999999999999999999999999999877779999999999999
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECCC
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASEN 656 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~dg 656 (786)
|+.... |.+++.. .+.+.+|+.. ...++++..|++|++||++...+..... +.++++..++++..+++++.|.
T Consensus 289 Dl~k~~-C~kt~l~-~S~cnDI~~~---~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDd 363 (459)
T KOG0288|consen 289 DLQKAY-CSKTVLP-GSQCNDIVCS---ISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDD 363 (459)
T ss_pred hhhhhh-eeccccc-cccccceEec---ceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCC
Confidence 998854 4544432 3456666665 4467799999999999999988877655 7889999999999999999999
Q ss_pred eEEEEEcCCCcEEEEEec----CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCc--eEEEEEeCCC
Q 044075 657 VVSIFDVETDRLTHSFKG----HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNK--FHSCIFHPSY 729 (786)
Q Consensus 657 ~I~iwD~~t~~~i~~l~~----h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~--I~sv~fspdg 729 (786)
++.++|+++......+.. .....+.++|+|++.|+++|+.| .|+||++.++++.+.+...... |++++|+|.|
T Consensus 364 tl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG 443 (459)
T KOG0288|consen 364 TLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSG 443 (459)
T ss_pred ceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCC
Confidence 999999999988877764 23458899999999999999999 9999999999999998877665 9999999999
Q ss_pred CEEEEEECCCeEEEE
Q 044075 730 PTLMVIGGYQSLELW 744 (786)
Q Consensus 730 ~~L~sgs~dg~I~Iw 744 (786)
.++++++.++.+.+|
T Consensus 444 ~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 444 SGLLSADKQKAVTLW 458 (459)
T ss_pred chhhcccCCcceEec
Confidence 999999999999999
No 89
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=1.7e-23 Score=212.55 Aligned_cols=266 Identities=17% Similarity=0.219 Sum_probs=212.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
..+.|..+.|+|.+..|++++.||.+++||+........+ .|..++.+++|.+ ...+++|+.||.|+.+|+.++. .
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~-~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~--~ 87 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKF-KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGN--E 87 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhe-ecCCceeeeeccC-CceEEEeccCceEEEEEecCCc--c
Confidence 3567999999999889999999999999999987554444 6889999999996 5579999999999999999876 5
Q ss_pred eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCc
Q 044075 588 QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDR 667 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~ 667 (786)
..+..|...|.||.+.+..+ .+++|+.|++|++||.+.......+...-.-.+.+-.++.|++|+.+..|.+||+++..
T Consensus 88 ~~igth~~~i~ci~~~~~~~-~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~ 166 (323)
T KOG1036|consen 88 DQIGTHDEGIRCIEYSYEVG-CVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLD 166 (323)
T ss_pred eeeccCCCceEEEEeeccCC-eEEEcccCccEEEEeccccccccccccCceEEEEeccCCEEEEeecCceEEEEEccccc
Confidence 56677999999999997655 45599999999999999755554444333334556667899999999999999999875
Q ss_pred EEEEEe--cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC----eeEEEEccCC---------CceEEEEEeCCCCE
Q 044075 668 LTHSFK--GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG----ECIHELSSSG---------NKFHSCIFHPSYPT 731 (786)
Q Consensus 668 ~i~~l~--~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~----~~i~~l~~~~---------~~I~sv~fspdg~~ 731 (786)
...... ..+-.+.||++.|++.-+++++-+ .|.+=.+... +.-..|+.|. .+|.+++|+|-...
T Consensus 167 ~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~t 246 (323)
T KOG1036|consen 167 EPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGT 246 (323)
T ss_pred chhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccce
Confidence 444222 245578999999988777777777 6665444433 2334455552 36899999999999
Q ss_pred EEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeC
Q 044075 732 LMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASH 778 (786)
Q Consensus 732 L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~ 778 (786)
|++|+.||.|.+||+.+.+.+ .+......|.+++|+.||..||+++.
T Consensus 247 faTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 247 FATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred EEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 999999999999999988776 44455678999999999999999874
No 90
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=3e-24 Score=229.11 Aligned_cols=241 Identities=21% Similarity=0.300 Sum_probs=210.2
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEcCCC
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRP-NSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s 582 (786)
++....+.|.+++|..||++||+|+..|.|+|||+++...+..+..|..+|..+.|+| ++..|++|++|+.+++||+.+
T Consensus 63 ~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~ 142 (487)
T KOG0310|consen 63 TFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLST 142 (487)
T ss_pred hHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCC
Confidence 3444567899999999999999999999999999888778889999999999999999 556788899999999999998
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC-eeeEeec--CCeEEEEEeCCCCEEEEEECCCeEE
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY-SCARISK--GGTVQVRFQPRLGLLLAAASENVVS 659 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~-~~~~~~~--~~i~~i~~sp~g~~Ll~gs~dg~I~ 659 (786)
.. ....+.+|++.|.|.+|+|-..+++++|+.||.|++||++.. ..+..+. .++..+.+-|.|..+++++. +.|+
T Consensus 143 a~-v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgG-n~vk 220 (487)
T KOG0310|consen 143 AY-VQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAGG-NSVK 220 (487)
T ss_pred cE-EEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcCC-CeEE
Confidence 76 466889999999999999999999999999999999999986 4444443 67788999999887776654 7899
Q ss_pred EEEcCCC-cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEEC
Q 044075 660 IFDVETD-RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGG 737 (786)
Q Consensus 660 iwD~~t~-~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~ 737 (786)
|||+.+| +.+..+..|...|+|+++..++..|++++-| .|++||+.+.+.++.+.- .++|.+++.+|++..+++|..
T Consensus 221 VWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~-~~pvLsiavs~dd~t~viGms 299 (487)
T KOG0310|consen 221 VWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKY-PGPVLSIAVSPDDQTVVIGMS 299 (487)
T ss_pred EEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeeec-ccceeeEEecCCCceEEEecc
Confidence 9999966 5555666699999999999999999999999 999999999999988865 589999999999999999999
Q ss_pred CCeEEEEECC
Q 044075 738 YQSLELWNMA 747 (786)
Q Consensus 738 dg~I~IwDl~ 747 (786)
+|.+.+-+..
T Consensus 300 nGlv~~rr~~ 309 (487)
T KOG0310|consen 300 NGLVSIRRRE 309 (487)
T ss_pred cceeeeehhh
Confidence 9987776443
No 91
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.92 E-value=5.6e-24 Score=230.69 Aligned_cols=294 Identities=20% Similarity=0.255 Sum_probs=238.4
Q ss_pred ccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCC--EE
Q 044075 489 QATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNST--QL 566 (786)
Q Consensus 489 ~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~--~L 566 (786)
........|.-.+-..+++|++.|.||...|.|.+||+|+.||+|+||.+.++.++.++.- .+.|.||+|+|.+. .|
T Consensus 380 Psp~dLrPFPt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~-d~~I~~vaw~P~~~~~vL 458 (733)
T KOG0650|consen 380 PSPKDLRPFPTRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQF-DSEIRSVAWNPLSDLCVL 458 (733)
T ss_pred CChhhcCCCcceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEee-cceeEEEEecCCCCceeE
Confidence 3344556777778888999999999999999999999999999999999999999998853 45899999999664 34
Q ss_pred EEEeCCCcEEEEcCCCC------------------------------------cceeeeecCCCCCeEEEEEecCCCeEE
Q 044075 567 ATSSFDKTVRIWDAAKP------------------------------------NFCLQTYTGHNNHVMSLDFHPKKNDLF 610 (786)
Q Consensus 567 asgs~Dg~I~VWdl~s~------------------------------------~~~~~~~~~h~~~V~sl~~sp~g~~ll 610 (786)
|++- +..+.|-+..-+ ..-++....|...|..+.||..|.++.
T Consensus 459 AvA~-~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYla 537 (733)
T KOG0650|consen 459 AVAV-GECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLA 537 (733)
T ss_pred EEEe-cCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEE
Confidence 4433 333444332111 111234456888999999999999887
Q ss_pred EEEcC--CCcEEEEeCCCCeeeEe---ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEc
Q 044075 611 CSCDG--NSEIRFWNLSQYSCARI---SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWD 685 (786)
Q Consensus 611 ~sgs~--Dg~I~iwDl~~~~~~~~---~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~s 685 (786)
.++.. ...|.|+++........ .++.+.++.|+|...+|++++. ..|+|||+....+++.+......|..++++
T Consensus 538 tV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msih 616 (733)
T KOG0650|consen 538 TVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIH 616 (733)
T ss_pred EeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeec
Confidence 66643 45688999987665443 4588899999999999988876 789999999988888888788899999999
Q ss_pred CCCCEEEEEeCC-eEEEEECCCC-eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEE------CCCCeEE----E
Q 044075 686 TNGEYLASVSQD-SVRVWSLASG-ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWN------MAENKCM----T 753 (786)
Q Consensus 686 pdg~~Lasgs~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwD------l~~~~~~----~ 753 (786)
|.|..|++++.| .+..||+.-. ++.+++..|...+++++||+..+.+++|+.||++.||. +-.+..+ .
T Consensus 617 p~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~ 696 (733)
T KOG0650|consen 617 PNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKR 696 (733)
T ss_pred CCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeee
Confidence 999999999999 9999999854 67888999999999999999999999999999998883 3222222 5
Q ss_pred EcccCCC----eEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 754 IAAHDCV----ISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 754 ~~~h~~~----V~slafspdg~~LaSgs~DG~I~IW 785 (786)
+.+|... |.++.|+|.-.+|++++.||+|++|
T Consensus 697 L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 697 LRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred ccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 6677665 9999999999999999999999998
No 92
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.92 E-value=7.8e-24 Score=244.56 Aligned_cols=249 Identities=20% Similarity=0.381 Sum_probs=215.6
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC------------------CeeeeecCCCCCCeEEEEEcc
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN------------------FQTECTPDDHNHIITDVRFRP 561 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t------------------~~~~~~l~~h~~~V~sl~fsp 561 (786)
+.+.+...|.+.|+|+.|++||++||+|++|+.|.||.... .+.+..+.+|...|.+++|+|
T Consensus 60 k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp 139 (942)
T KOG0973|consen 60 KHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP 139 (942)
T ss_pred hhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC
Confidence 56778889999999999999999999999999999998762 346778899999999999999
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-------
Q 044075 562 NSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK------- 634 (786)
Q Consensus 562 dg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~------- 634 (786)
++.+|++++.|++|.||+..+. ..+..+.+|.+.|..+.|.|-|.++ ++-+.|++|+||++....+.+...
T Consensus 140 ~~~~lvS~s~DnsViiwn~~tF-~~~~vl~~H~s~VKGvs~DP~Gky~-ASqsdDrtikvwrt~dw~i~k~It~pf~~~~ 217 (942)
T KOG0973|consen 140 DDSLLVSVSLDNSVIIWNAKTF-ELLKVLRGHQSLVKGVSWDPIGKYF-ASQSDDRTLKVWRTSDWGIEKSITKPFEESP 217 (942)
T ss_pred CccEEEEecccceEEEEccccc-eeeeeeecccccccceEECCccCee-eeecCCceEEEEEcccceeeEeeccchhhCC
Confidence 9999999999999999999998 5799999999999999999998865 588899999999988766665544
Q ss_pred --CCeEEEEEeCCCCEEEEEEC----CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCC-----CC------------EE
Q 044075 635 --GGTVQVRFQPRLGLLLAAAS----ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTN-----GE------------YL 691 (786)
Q Consensus 635 --~~i~~i~~sp~g~~Ll~gs~----dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spd-----g~------------~L 691 (786)
.....+.|+|||.+|++... -..+.|.+-.+.+.-..+.+|..++.++.|+|. .. .+
T Consensus 218 ~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~ 297 (942)
T KOG0973|consen 218 LTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIA 297 (942)
T ss_pred CcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEE
Confidence 23466889999999998765 247899999888888999999999999999871 11 57
Q ss_pred EEEeCC-eEEEEECCCCeeEEEEcc-CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe
Q 044075 692 ASVSQD-SVRVWSLASGECIHELSS-SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK 750 (786)
Q Consensus 692 asgs~D-~I~vwDl~s~~~i~~l~~-~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~ 750 (786)
|+|+.| +|.||.....+++..+.. ....|..++|+|||-.|++++.||+|.++.+..++
T Consensus 298 AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~E 358 (942)
T KOG0973|consen 298 AVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEKE 358 (942)
T ss_pred EEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchHH
Confidence 888999 999999987777655433 36789999999999999999999999999987643
No 93
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.92 E-value=1.7e-23 Score=221.72 Aligned_cols=271 Identities=20% Similarity=0.322 Sum_probs=226.4
Q ss_pred eEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee----e-------------c-CCCCCCeEEEEEccCC
Q 044075 502 VSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC----T-------------P-DDHNHIITDVRFRPNS 563 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~----~-------------l-~~h~~~V~sl~fspdg 563 (786)
+..+..|.-+|+||+++||++++++++.+++|.=|++.+++... . - +.|...|.+++.++|+
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 66788899999999999999999999999999999998766431 1 0 2688899999999999
Q ss_pred CEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe---ecCCeEEE
Q 044075 564 TQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI---SKGGTVQV 640 (786)
Q Consensus 564 ~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~---~~~~i~~i 640 (786)
++|++|+.|..|.||+.++.+ .+..+.+|.+.|.+++|-...+.++ +++.|+.|++|++.....+.. +...+..+
T Consensus 215 kylatgg~d~~v~Iw~~~t~e-hv~~~~ghr~~V~~L~fr~gt~~ly-s~s~Drsvkvw~~~~~s~vetlyGHqd~v~~I 292 (479)
T KOG0299|consen 215 KYLATGGRDRHVQIWDCDTLE-HVKVFKGHRGAVSSLAFRKGTSELY-SASADRSVKVWSIDQLSYVETLYGHQDGVLGI 292 (479)
T ss_pred cEEEecCCCceEEEecCcccc-hhhcccccccceeeeeeecCcccee-eeecCCceEEEehhHhHHHHHHhCCccceeee
Confidence 999999999999999999987 5778999999999999986555555 899999999999988665544 44667778
Q ss_pred EEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC---
Q 044075 641 RFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS--- 716 (786)
Q Consensus 641 ~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~--- 716 (786)
.....++.+-+|+.|+++++|++.. +....+.+|.+.+-|++|- +...|++|+++ .|.+|++-+.+++.+....
T Consensus 293 daL~reR~vtVGgrDrT~rlwKi~e-esqlifrg~~~sidcv~~I-n~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv 370 (479)
T KOG0299|consen 293 DALSRERCVTVGGRDRTVRLWKIPE-ESQLIFRGGEGSIDCVAFI-NDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGV 370 (479)
T ss_pred chhcccceEEeccccceeEEEeccc-cceeeeeCCCCCeeeEEEe-cccceeeccCCceEEEeeecccCceeEeeccccc
Confidence 8888888888888999999999943 4445677889999999996 45678889988 9999999998888765421
Q ss_pred ---------CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe----EEEEcccCCCeEEEEEcCCCCEEEEE
Q 044075 717 ---------GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK----CMTIAAHDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 717 ---------~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~----~~~~~~h~~~V~slafspdg~~LaSg 776 (786)
...|++++..|....+++|+.+|.|++|.+.++. ++....-.+.|++|+|+++|+.|++|
T Consensus 371 ~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivag 443 (479)
T KOG0299|consen 371 IPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAG 443 (479)
T ss_pred cCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEe
Confidence 1278999999999999999999999999999882 23333467889999999999966554
No 94
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.92 E-value=1.3e-23 Score=231.74 Aligned_cols=275 Identities=17% Similarity=0.314 Sum_probs=231.3
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCee--eeecCCCCCCeEE-EEEcc-CCCEEEEEeCCCc
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQT--ECTPDDHNHIITD-VRFRP-NSTQLATSSFDKT 574 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~--~~~l~~h~~~V~s-l~fsp-dg~~Lasgs~Dg~ 574 (786)
++.-+.+.+|...|..|++.++. .+++++.||+++||+-..... ...+.+|.+.|.+ +++.+ ++-.|++|+.|.+
T Consensus 4 Y~ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~ 82 (745)
T KOG0301|consen 4 YKLSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTT 82 (745)
T ss_pred ceeEEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccce
Confidence 45567899999999999887654 789999999999999754443 3456778888877 88886 4556999999999
Q ss_pred EEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe-eeEeecCCeEEEEEeCCCCEEEEEE
Q 044075 575 VRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS-CARISKGGTVQVRFQPRLGLLLAAA 653 (786)
Q Consensus 575 I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~-~~~~~~~~i~~i~~sp~g~~Ll~gs 653 (786)
|.+|.+.... +..++.+|...|.|++...++. +++|+.|.++++|...... ....+...+..+..-|++ .+++|+
T Consensus 83 i~v~~~~~~~-P~~~LkgH~snVC~ls~~~~~~--~iSgSWD~TakvW~~~~l~~~l~gH~asVWAv~~l~e~-~~vTgs 158 (745)
T KOG0301|consen 83 IIVFKLSQAE-PLYTLKGHKSNVCSLSIGEDGT--LISGSWDSTAKVWRIGELVYSLQGHTASVWAVASLPEN-TYVTGS 158 (745)
T ss_pred EEEEecCCCC-chhhhhccccceeeeecCCcCc--eEecccccceEEecchhhhcccCCcchheeeeeecCCC-cEEecc
Confidence 9999998876 6889999999999999876655 5699999999999886533 234455667788888887 899999
Q ss_pred CCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEE
Q 044075 654 SENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTL 732 (786)
Q Consensus 654 ~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L 732 (786)
.|.+|++|.- ++.+++|.+|...|..+++-+++. |++|+.| .|++|++ +++++.++.+|.+-|.++....++..+
T Consensus 159 aDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~-flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~I 234 (745)
T KOG0301|consen 159 ADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSH-FLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLI 234 (745)
T ss_pred CcceeeeccC--CchhhhhccchhheeeeEEecCCC-eEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeE
Confidence 9999999976 688999999999999999987754 6677777 9999999 889999999999999999988888899
Q ss_pred EEEECCCeEEEEECCCCeEEEEcccCC-CeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 733 MVIGGYQSLELWNMAENKCMTIAAHDC-VISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 733 ~sgs~dg~I~IwDl~~~~~~~~~~h~~-~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
++++.|++++||+.. .+.....|.. .|+++.+-++|. |++|++||.||||
T Consensus 235 vs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVf 285 (745)
T KOG0301|consen 235 VSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVF 285 (745)
T ss_pred EEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEE
Confidence 999999999999987 6666566655 899999988775 5678899999998
No 95
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.92 E-value=1.3e-23 Score=240.00 Aligned_cols=245 Identities=20% Similarity=0.396 Sum_probs=215.2
Q ss_pred eeeeeEE-eecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEE
Q 044075 498 SFNEVSS-IRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVR 576 (786)
Q Consensus 498 ~~~~v~~-l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~ 576 (786)
....+.. +.+|.+.|++++|..-+.+|++|+.|.+++|||+.++.+..++.+|.+.|.++... ..++++|+.|.+|+
T Consensus 237 ~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVk 314 (537)
T KOG0274|consen 237 NGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVK 314 (537)
T ss_pred cceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEcc--CceEeeccCCceEE
Confidence 3345555 99999999999999888899999999999999999999999999999999999876 45788899999999
Q ss_pred EEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC---eEEEEEeCCCCEEEEEE
Q 044075 577 IWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG---TVQVRFQPRLGLLLAAA 653 (786)
Q Consensus 577 VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~---i~~i~~sp~g~~Ll~gs 653 (786)
||++.++. ++..+.+|.+.|.++..+ ..++++|+.|++|++||+.+++++..+.++ +.++.+... ..++.|+
T Consensus 315 VW~v~n~~-~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs 389 (537)
T KOG0274|consen 315 VWDVTNGA-CLNLLRGHTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGS 389 (537)
T ss_pred EEeccCcc-eEEEeccccccEEEEEec---CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeee
Confidence 99999876 688888899999999998 346669999999999999999999888755 455555544 8999999
Q ss_pred CCCeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc-CCCceEEEEEeCCCC
Q 044075 654 SENVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS-SGNKFHSCIFHPSYP 730 (786)
Q Consensus 654 ~dg~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~-~~~~I~sv~fspdg~ 730 (786)
.|+.|++||+++. +++..+.+|..-+.++. ..+++|++++.| +|++||..++++++++.. |...|..+.+. ..
T Consensus 390 ~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~--~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~ 465 (537)
T KOG0274|consen 390 LDTTIKVWDLRTKRKCIHTLQGHTSLVSSLL--LRDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG--KE 465 (537)
T ss_pred eccceEeecCCchhhhhhhhcCCcccccccc--cccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecC--cc
Confidence 9999999999999 99999999999886665 467889999999 999999999999999998 56788888776 46
Q ss_pred EEEEEECCCeEEEEECCCCeEEE
Q 044075 731 TLMVIGGYQSLELWNMAENKCMT 753 (786)
Q Consensus 731 ~L~sgs~dg~I~IwDl~~~~~~~ 753 (786)
.+++++.++.+++||+++++...
T Consensus 466 ~il~s~~~~~~~l~dl~~~~~~~ 488 (537)
T KOG0274|consen 466 EILCSSDDGSVKLWDLRSGTLIR 488 (537)
T ss_pred eEEEEecCCeeEEEecccCchhh
Confidence 79999999999999999988763
No 96
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=1.8e-23 Score=212.05 Aligned_cols=272 Identities=21% Similarity=0.344 Sum_probs=220.6
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeec
Q 044075 512 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYT 591 (786)
Q Consensus 512 V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~ 591 (786)
..||.|++.|.+||+|+.||.|.|||+.++..-+.+.+|..+|++++|+++|+.|++++.|..|.+||+..+. ++..+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs-~l~rir 104 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGS-PLKRIR 104 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCC-ceeEEE
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999988 444443
Q ss_pred CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-------CCeEEEEEeCCCCEEEEEECCCeEEEEEcC
Q 044075 592 GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-------GGTVQVRFQPRLGLLLAAASENVVSIFDVE 664 (786)
Q Consensus 592 ~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-------~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~ 664 (786)
..++|+.+.|+|...+.++++--+..-.+.++.......... ....+..|.+.|+++++|...|.+.++|.+
T Consensus 105 -f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~ 183 (405)
T KOG1273|consen 105 -FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAE 183 (405)
T ss_pred -ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecc
Confidence 568999999999887777666555555566655422221111 112234588999999999999999999999
Q ss_pred CCcEEEEEecCC-CCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC-------e--eEEEEcc--CCCceEEEEEeCCCCE
Q 044075 665 TDRLTHSFKGHS-TEIHSVCWDTNGEYLASVSQD-SVRVWSLASG-------E--CIHELSS--SGNKFHSCIFHPSYPT 731 (786)
Q Consensus 665 t~~~i~~l~~h~-~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~-------~--~i~~l~~--~~~~I~sv~fspdg~~ 731 (786)
+.+++..++-.. ..|..|.++..|++|+.-+.| .|+.|+++.- + +.+++.. ....-.+|+|+.+|.|
T Consensus 184 t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeY 263 (405)
T KOG1273|consen 184 TLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEY 263 (405)
T ss_pred hheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccE
Confidence 999999988655 789999999999999999999 9999998731 1 1111111 1234568899999999
Q ss_pred EEEEECCC-eEEEEECCCCeEEEEc-ccC-CCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 732 LMVIGGYQ-SLELWNMAENKCMTIA-AHD-CVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 732 L~sgs~dg-~I~IwDl~~~~~~~~~-~h~-~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+++++..- .++||....|.++++. +.. ....++.|+|-...|++- ..|.|+||.
T Consensus 264 v~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~ 320 (405)
T KOG1273|consen 264 VCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWA 320 (405)
T ss_pred EEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEE
Confidence 99888653 7999999999988654 444 578899999999999888 788999993
No 97
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.92 E-value=3.8e-23 Score=227.13 Aligned_cols=309 Identities=14% Similarity=0.218 Sum_probs=240.5
Q ss_pred eeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCC-----------CCEEEEEECCCeEE
Q 044075 466 SFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSD-----------GKLLASAGHDKKVV 534 (786)
Q Consensus 466 ~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpd-----------g~~Lasgs~Dg~V~ 534 (786)
.+++....|-...+|.+... -.......+--|...|+.+.--|. ...++||+.|++|+
T Consensus 337 ~klscVYndhSlYvWDvrD~-----------~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIR 405 (1080)
T KOG1408|consen 337 DKLSCVYNDHSLYVWDVRDV-----------NKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIR 405 (1080)
T ss_pred ceEEEEEcCceEEEEecccc-----------ccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEE
Confidence 34444444555555554432 122334455568888888876651 23588999999999
Q ss_pred EEEcCCCe---eee----------ec------------------------CCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 535 VWNMENFQ---TEC----------TP------------------------DDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 535 IWdl~t~~---~~~----------~l------------------------~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
+|+++.+. ..+ .. -.....|.+++.+|++.+|++|..-|+++|
T Consensus 406 lW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrV 485 (1080)
T KOG1408|consen 406 LWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRV 485 (1080)
T ss_pred EeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEE
Confidence 99987411 100 00 122456999999999999999999999999
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecC--CCeEEEEEcCCCcEEEEeCCCCee----eEeecCCeEEEEEeCCC--CEE
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPK--KNDLFCSCDGNSEIRFWNLSQYSC----ARISKGGTVQVRFQPRL--GLL 649 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~--g~~ll~sgs~Dg~I~iwDl~~~~~----~~~~~~~i~~i~~sp~g--~~L 649 (786)
|++.+.++ ...+..|...|.|+.|+.. +..|+++++.|..|++||+...-. +..+...|+++.|...| ..+
T Consensus 486 y~Lq~l~~-~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~M 564 (1080)
T KOG1408|consen 486 YDLQELEY-TCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKM 564 (1080)
T ss_pred EEehhhhh-hhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEE
Confidence 99988763 6678899999999999743 467899999999999999975432 23345678999998877 678
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEec-----CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc---CCCce
Q 044075 650 LAAASENVVSIFDVETDRLTHSFKG-----HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS---SGNKF 720 (786)
Q Consensus 650 l~gs~dg~I~iwD~~t~~~i~~l~~-----h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~---~~~~I 720 (786)
++++.|..|.+--.........|.. ....+..++..|..+++++++.| .|+|||+.+++..+.|++ |++..
T Consensus 565 iscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~l 644 (1080)
T KOG1408|consen 565 ISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDL 644 (1080)
T ss_pred EeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCce
Confidence 8999998876544432222222221 24568899999999999999999 999999999999999986 45678
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 721 HSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 721 ~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
..+...|.|.||++...|.++.++|..+++++ ...+|...|+.+.|.+|.+.|++.+.||.|.||+
T Consensus 645 IKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~ 711 (1080)
T KOG1408|consen 645 IKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWK 711 (1080)
T ss_pred EEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEE
Confidence 88999999999999999999999999999998 7889999999999999999999999999999995
No 98
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.92 E-value=3.5e-22 Score=224.18 Aligned_cols=305 Identities=18% Similarity=0.303 Sum_probs=247.0
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCE-EEEEECCCeEEEEEcCCCeeee
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKL-LASAGHDKKVVVWNMENFQTEC 545 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~-Lasgs~Dg~V~IWdl~t~~~~~ 545 (786)
.++-.-.+|+..+.+++.+ +.+.+++..-+.|+.|+|..||.. ||+|+..|.+.+||++..+.+.
T Consensus 216 VVaiG~~~G~ViifNlK~d--------------kil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~ 281 (910)
T KOG1539|consen 216 VVAIGLENGTVIIFNLKFD--------------KILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLIN 281 (910)
T ss_pred EEEEeccCceEEEEEcccC--------------cEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeee
Confidence 4455556788888877654 345555544699999999999875 6777788999999999988877
Q ss_pred ecC-CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc---eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEE
Q 044075 546 TPD-DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF---CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRF 621 (786)
Q Consensus 546 ~l~-~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~---~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~i 621 (786)
.+. .|.+.|....|.+....+++++.|..+++|-.+++.. .++...+|..+..||.|.-...+.+.+++.|++++.
T Consensus 282 v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~ 361 (910)
T KOG1539|consen 282 VTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRS 361 (910)
T ss_pred eeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhh
Confidence 775 7989999999999999999999999999996665442 355667899999999998555555557777776666
Q ss_pred EeCC-----------------------------------------------------------------CCee---eEe-
Q 044075 622 WNLS-----------------------------------------------------------------QYSC---ARI- 632 (786)
Q Consensus 622 wDl~-----------------------------------------------------------------~~~~---~~~- 632 (786)
+++. +... +..
T Consensus 362 fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~ 441 (910)
T KOG1539|consen 362 FSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDP 441 (910)
T ss_pred hhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecC
Confidence 6541 1110 000
Q ss_pred -----ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEE---ecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEE
Q 044075 633 -----SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSF---KGHSTEIHSVCWDTNGEYLASVSQD-SVRVWS 703 (786)
Q Consensus 633 -----~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l---~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwD 703 (786)
....+++++.++.|++.+.|++.|.|.+|++.+|-...++ ..|..+|++++.+.-++.+++++.+ -+++||
T Consensus 442 ~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~ 521 (910)
T KOG1539|consen 442 KRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWD 521 (910)
T ss_pred ccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEe
Confidence 0124577889999999999999999999999999888888 4799999999999888888888887 888898
Q ss_pred CCCCee-----------------------------------------EEEEccCCCceEEEEEeCCCCEEEEEECCCeEE
Q 044075 704 LASGEC-----------------------------------------IHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLE 742 (786)
Q Consensus 704 l~s~~~-----------------------------------------i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~ 742 (786)
..+... ++.+.+|.+.|++++|+|||++|++++.|++|+
T Consensus 522 f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr 601 (910)
T KOG1539|consen 522 FKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIR 601 (910)
T ss_pred cCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEE
Confidence 875432 234457889999999999999999999999999
Q ss_pred EEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCC-CcEEEe
Q 044075 743 LWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHD-KSVKIW 785 (786)
Q Consensus 743 IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~D-G~I~IW 785 (786)
+||+.++.++-...-+.+++++.|+|+|.+|||+..| .-|++|
T Consensus 602 ~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd~~gIylW 645 (910)
T KOG1539|consen 602 TWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVDQNGIYLW 645 (910)
T ss_pred EEeccCcceeeeEecCCcceeeEECCCCCEEEEEEecCceEEEE
Confidence 9999999999888889999999999999999999998 679998
No 99
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=2.3e-22 Score=195.40 Aligned_cols=242 Identities=22% Similarity=0.427 Sum_probs=205.4
Q ss_pred eEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe-----eeeecCCCCCCeEEEEEccC----CCEEEEEeC-
Q 044075 502 VSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ-----TECTPDDHNHIITDVRFRPN----STQLATSSF- 571 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~-----~~~~l~~h~~~V~sl~fspd----g~~Lasgs~- 571 (786)
.+.-+.|.+.|.|.+|||+|++||+|+.|.+|++.-++... ....+.-|.+.|.+++|..+ +.+|++++.
T Consensus 82 ~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gag 161 (350)
T KOG0641|consen 82 CKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAG 161 (350)
T ss_pred eeeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCC
Confidence 44566799999999999999999999999999998765322 22456779999999999753 456777654
Q ss_pred CCcEEEEcCCCCcceeeeecCCCCCeEEEE-EecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec----------CCeEEE
Q 044075 572 DKTVRIWDAAKPNFCLQTYTGHNNHVMSLD-FHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK----------GGTVQV 640 (786)
Q Consensus 572 Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~-~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----------~~i~~i 640 (786)
|..|++-|...+. ....+.+|.+.|.++- |+ ..+|++|+.|.+|++||++-..++.... ..+..+
T Consensus 162 dc~iy~tdc~~g~-~~~a~sghtghilalyswn---~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav 237 (350)
T KOG0641|consen 162 DCKIYITDCGRGQ-GFHALSGHTGHILALYSWN---GAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAV 237 (350)
T ss_pred cceEEEeecCCCC-cceeecCCcccEEEEEEec---CcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEE
Confidence 6777777887766 5788999999998764 43 6688899999999999999888876543 356789
Q ss_pred EEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC----eeEEEEcc
Q 044075 641 RFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG----ECIHELSS 715 (786)
Q Consensus 641 ~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~----~~i~~l~~ 715 (786)
++.|.|+.|++|-.|....+||++.++.+..+..|...|.|+.|+|...|+++|+.| .|++-|+... -.+.....
T Consensus 238 ~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~e 317 (350)
T KOG0641|consen 238 AVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAE 317 (350)
T ss_pred EECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999 9999998742 24455667
Q ss_pred CCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 716 SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 716 ~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
|...+..|.|+|..-.+++.+.|.++.+|-+.
T Consensus 318 hkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 318 HKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred ccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 88999999999999899999999999999764
No 100
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=1.3e-22 Score=224.34 Aligned_cols=237 Identities=19% Similarity=0.337 Sum_probs=210.4
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCC-CCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDD-HNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~-h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
.+.|+++.|+++|.+||+|..+|.|.|||..+.+.+..+.+ |...|-+++|. +..+.+|+.|+.|..+|++......
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~ 294 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVV 294 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhh
Confidence 78999999999999999999999999999999999999988 99999999998 6789999999999999999887666
Q ss_pred eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee---eEeecCCeEEEEEeCCC-CEEEEEE--CCCeEEEE
Q 044075 588 QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC---ARISKGGTVQVRFQPRL-GLLLAAA--SENVVSIF 661 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~---~~~~~~~i~~i~~sp~g-~~Ll~gs--~dg~I~iw 661 (786)
..+.+|...|..+.|++++..+ ++|+.|+.+.|||...... +..+...+..++|+|-. +.|++|+ .|+.|++|
T Consensus 295 ~~~~~H~qeVCgLkws~d~~~l-ASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fw 373 (484)
T KOG0305|consen 295 STLQGHRQEVCGLKWSPDGNQL-ASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFW 373 (484)
T ss_pred hhhhcccceeeeeEECCCCCee-ccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEE
Confidence 6688999999999999998755 5999999999999955443 34456788999999965 4555554 48999999
Q ss_pred EcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC---eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECC
Q 044075 662 DVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD---SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY 738 (786)
Q Consensus 662 D~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D---~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d 738 (786)
|..+++.+..+. ....|+.|.|++..+-|+++... .|.||+..+.+.+..+.+|...|..++++|||..+++++.|
T Consensus 374 n~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~D 452 (484)
T KOG0305|consen 374 NTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAAD 452 (484)
T ss_pred EcCCCcEecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEeccc
Confidence 999999998887 57789999999998777765432 79999999999999999999999999999999999999999
Q ss_pred CeEEEEECCCC
Q 044075 739 QSLELWNMAEN 749 (786)
Q Consensus 739 g~I~IwDl~~~ 749 (786)
.++++|++-+.
T Consensus 453 ETlrfw~~f~~ 463 (484)
T KOG0305|consen 453 ETLRFWNLFDE 463 (484)
T ss_pred CcEEeccccCC
Confidence 99999998764
No 101
>PTZ00420 coronin; Provisional
Probab=99.91 E-value=7.1e-22 Score=226.64 Aligned_cols=216 Identities=12% Similarity=0.256 Sum_probs=174.9
Q ss_pred EeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe-----------eeEeecCCe
Q 044075 569 SSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS-----------CARISKGGT 637 (786)
Q Consensus 569 gs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~-----------~~~~~~~~i 637 (786)
|+.++.|++|+..... .+..+.+|...|.+++|+|+...++++|+.|++|++||+.+.. .+..+...+
T Consensus 50 GG~~gvI~L~~~~r~~-~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V 128 (568)
T PTZ00420 50 GGLIGAIRLENQMRKP-PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKI 128 (568)
T ss_pred CCceeEEEeeecCCCc-eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcE
Confidence 5668899999987654 5778899999999999999866788899999999999997532 122345678
Q ss_pred EEEEEeCCCCEE-EEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc
Q 044075 638 VQVRFQPRLGLL-LAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS 715 (786)
Q Consensus 638 ~~i~~sp~g~~L-l~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~ 715 (786)
.+++|+|++..+ ++++.|+.|+|||+++++.+..+. |...|.+++|+++|.+|++++.| .|+|||+++++.+.++..
T Consensus 129 ~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~g 207 (568)
T PTZ00420 129 SIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHI 207 (568)
T ss_pred EEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 999999998765 578899999999999998877776 66789999999999999999988 999999999999999999
Q ss_pred CCCceEEE-----EEeCCCCEEEEEECCC----eEEEEECCC-CeEEEEccc---CCCeEEEEEcCCCCEEEEEeCCCcE
Q 044075 716 SGNKFHSC-----IFHPSYPTLMVIGGYQ----SLELWNMAE-NKCMTIAAH---DCVISALAQSPVTGMVASASHDKSV 782 (786)
Q Consensus 716 ~~~~I~sv-----~fspdg~~L~sgs~dg----~I~IwDl~~-~~~~~~~~h---~~~V~slafspdg~~LaSgs~DG~I 782 (786)
|.+.+... .|++++.+|++++.++ .|+|||++. .+.+....+ .+.+......+++.++++|+.|+.|
T Consensus 208 H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tI 287 (568)
T PTZ00420 208 HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNC 287 (568)
T ss_pred ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeE
Confidence 87764332 3458889999988775 799999995 444433333 3334444445568889999999999
Q ss_pred EEeC
Q 044075 783 KIWK 786 (786)
Q Consensus 783 ~IWd 786 (786)
++|+
T Consensus 288 r~~e 291 (568)
T PTZ00420 288 RYYQ 291 (568)
T ss_pred EEEE
Confidence 9996
No 102
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.91 E-value=3.2e-22 Score=199.23 Aligned_cols=230 Identities=18% Similarity=0.291 Sum_probs=207.6
Q ss_pred ecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC
Q 044075 546 TPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS 625 (786)
Q Consensus 546 ~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~ 625 (786)
.+.+|+.+++.|.++.+|.+|++|+.|.++.||-..+++ .+-++.+|.+.|+|++...+...++ +|+.|.++++||++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGe-rlGty~GHtGavW~~Did~~s~~li-TGSAD~t~kLWDv~ 82 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGE-RLGTYDGHTGAVWCCDIDWDSKHLI-TGSADQTAKLWDVE 82 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCc-eeeeecCCCceEEEEEecCCcceee-eccccceeEEEEcC
Confidence 467899999999999999999999999999999887777 5889999999999999998777665 99999999999999
Q ss_pred CCeeeEeec--CCeEEEEEeCCCCEEEEEECC-----CeEEEEEcC-------CCcEEEEEecCCCCEEEEEEcCCCCEE
Q 044075 626 QYSCARISK--GGTVQVRFQPRLGLLLAAASE-----NVVSIFDVE-------TDRLTHSFKGHSTEIHSVCWDTNGEYL 691 (786)
Q Consensus 626 ~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~d-----g~I~iwD~~-------t~~~i~~l~~h~~~I~sv~~spdg~~L 691 (786)
+++++...+ ..+..+.|+.+++++++...+ +.|.+||++ ..+++..+..+.+.++.+-|.|-+++|
T Consensus 83 tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~i 162 (327)
T KOG0643|consen 83 TGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETI 162 (327)
T ss_pred CCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEE
Confidence 999988776 567889999999998888764 679999998 446678888889999999999999999
Q ss_pred EEEeCC-eEEEEECCCC-eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCC
Q 044075 692 ASVSQD-SVRVWSLASG-ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPV 769 (786)
Q Consensus 692 asgs~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspd 769 (786)
++|.++ .|.+||++++ +.+.....|...|+.+.++++..++++++.|.+-++||..+-.++.......+|++.+++|.
T Consensus 163 i~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~ 242 (327)
T KOG0643|consen 163 IAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPL 242 (327)
T ss_pred EEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecccccceecccc
Confidence 999999 9999999997 56677788999999999999999999999999999999999999988889999999999998
Q ss_pred CCEEEEEe
Q 044075 770 TGMVASAS 777 (786)
Q Consensus 770 g~~LaSgs 777 (786)
...++.|+
T Consensus 243 ~d~VilgG 250 (327)
T KOG0643|consen 243 LDHVILGG 250 (327)
T ss_pred cceEEecC
Confidence 77776665
No 103
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=1.6e-22 Score=214.24 Aligned_cols=278 Identities=19% Similarity=0.251 Sum_probs=230.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC--CeeeeecCCCCCCeEEEEEccCCC-EEEEEeCCCcEEEEcCCCCc
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN--FQTECTPDDHNHIITDVRFRPNST-QLATSSFDKTVRIWDAAKPN 584 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t--~~~~~~l~~h~~~V~sl~fspdg~-~Lasgs~Dg~I~VWdl~s~~ 584 (786)
..+.|+|+.|+|...+|++|+.|+.++||.++. ...+..+.-...+|.+.+|.|+|. .+++++....++.||+.+.+
T Consensus 212 s~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak 291 (514)
T KOG2055|consen 212 SHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK 291 (514)
T ss_pred CcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc
Confidence 457899999999999999999999999998873 445566666778999999999998 89999999999999998866
Q ss_pred ce-eeeecCCC-CCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECCCeEEE
Q 044075 585 FC-LQTYTGHN-NHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASENVVSI 660 (786)
Q Consensus 585 ~~-~~~~~~h~-~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~dg~I~i 660 (786)
.. +....++. ..+.....++++++++ ..+..|.|.+....+++.+..++ +.+..++|+.+++.|++++.+|.|++
T Consensus 292 ~~k~~~~~g~e~~~~e~FeVShd~~fia-~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v 370 (514)
T KOG2055|consen 292 VTKLKPPYGVEEKSMERFEVSHDSNFIA-IAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYV 370 (514)
T ss_pred cccccCCCCcccchhheeEecCCCCeEE-EcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEE
Confidence 32 22223333 3577788899988555 77889999999999988877665 78899999999999999999999999
Q ss_pred EEcCCCcEEEEEecCC-CCEEEEEEcCCCCEEEEEeCC-eEEEEECCC------CeeEEEEccCCCceEEEEEeCCCCEE
Q 044075 661 FDVETDRLTHSFKGHS-TEIHSVCWDTNGEYLASVSQD-SVRVWSLAS------GECIHELSSSGNKFHSCIFHPSYPTL 732 (786)
Q Consensus 661 wD~~t~~~i~~l~~h~-~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s------~~~i~~l~~~~~~I~sv~fspdg~~L 732 (786)
||++...+++.+.... -.-+++|.++++.|||+|++. .|.|||..+ .+++..+..-...|+++.|+++...|
T Consensus 371 ~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiL 450 (514)
T KOG2055|consen 371 WNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQIL 450 (514)
T ss_pred EecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhh
Confidence 9999999999887422 233578888999999999998 899999764 46777777778899999999999988
Q ss_pred EEEEC--CCeEEEEECCCCeEEEE----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 733 MVIGG--YQSLELWNMAENKCMTI----AAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 733 ~sgs~--dg~I~IwDl~~~~~~~~----~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+.++. +..+++-.+.......- ...-+.|+|++|+|.+.+||.|..+|.|.+|+
T Consensus 451 AiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~k 510 (514)
T KOG2055|consen 451 AIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFK 510 (514)
T ss_pred hhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEe
Confidence 88775 45888888877665522 23345799999999999999999999999996
No 104
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.91 E-value=7.2e-21 Score=203.19 Aligned_cols=263 Identities=14% Similarity=0.135 Sum_probs=198.0
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEE-EEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEE-eCCCcEEEE
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLL-ASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATS-SFDKTVRIW 578 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~L-asgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasg-s~Dg~I~VW 578 (786)
.+..+..|. .+.+++|+|+++.+ ++++.++.|++||+.+++....+..+.. +..++|+|+++.++++ +.|+.|++|
T Consensus 23 ~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~ 100 (300)
T TIGR03866 23 VTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVI 100 (300)
T ss_pred eEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEE
Confidence 344555454 47789999999976 5667889999999999888777765543 5688999999877655 568999999
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee--cCCeEEEEEeCCCCEEEEEE-CC
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS--KGGTVQVRFQPRLGLLLAAA-SE 655 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~--~~~i~~i~~sp~g~~Ll~gs-~d 655 (786)
|+.+.. .+..+. +...+.+++|+|++..++++...+..+.+||..+.+..... ......+.|++++.+|++++ .+
T Consensus 101 d~~~~~-~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 178 (300)
T TIGR03866 101 DIETRK-VLAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKELWVSSEIG 178 (300)
T ss_pred ECCCCe-EEeEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCEEEEEcCCC
Confidence 998765 344443 23457889999999877654443456778899887765432 24556789999999887665 58
Q ss_pred CeEEEEEcCCCcEEEEEecCC-------CCEEEEEEcCCCCEEEEE-eCC-eEEEEECCCCeeEEEEccCCCceEEEEEe
Q 044075 656 NVVSIFDVETDRLTHSFKGHS-------TEIHSVCWDTNGEYLASV-SQD-SVRVWSLASGECIHELSSSGNKFHSCIFH 726 (786)
Q Consensus 656 g~I~iwD~~t~~~i~~l~~h~-------~~I~sv~~spdg~~Lasg-s~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fs 726 (786)
+.|++||+++++.+..+..+. .....++|+|++++++++ +.+ .|.+||+++++.+..+. +...+.+++|+
T Consensus 179 ~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~ 257 (300)
T TIGR03866 179 GTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFT 257 (300)
T ss_pred CEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEEEC
Confidence 999999999998777664321 123468899999986554 334 89999999988776653 34578999999
Q ss_pred CCCCEEEEEE-CCCeEEEEECCCCeEEEEcccCCCeEEEEEcC
Q 044075 727 PSYPTLMVIG-GYQSLELWNMAENKCMTIAAHDCVISALAQSP 768 (786)
Q Consensus 727 pdg~~L~sgs-~dg~I~IwDl~~~~~~~~~~h~~~V~slafsp 768 (786)
|++.+|+++. .++.|.+||+.+++++.........+.++|+|
T Consensus 258 ~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 300 (300)
T TIGR03866 258 PDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVGRLPWGVVVRP 300 (300)
T ss_pred CCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcccccceeEeCC
Confidence 9999998874 58999999999999875555567778888875
No 105
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.91 E-value=4.8e-23 Score=226.39 Aligned_cols=244 Identities=23% Similarity=0.405 Sum_probs=215.5
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEcc---CCCEEEEEeCCCcEEEEcCCC
Q 044075 506 RKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRP---NSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 506 ~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fsp---dg~~Lasgs~Dg~I~VWdl~s 582 (786)
-.....|.|++.||+|++||+|..-|.++||++.+.+....++.|...|.|+.|+. ..++|++++.|.-|+|||+..
T Consensus 456 ~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~r 535 (1080)
T KOG1408|consen 456 CDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKR 535 (1080)
T ss_pred cCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEeccc
Confidence 34566799999999999999999999999999999999999999999999999986 356899999999999999988
Q ss_pred CcceeeeecCCCCCeEEEEEecCC-CeEEEEEcCCCcEEEEeCCCCe---ee-----EeecCCeEEEEEeCCCCEEEEEE
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKK-NDLFCSCDGNSEIRFWNLSQYS---CA-----RISKGGTVQVRFQPRLGLLLAAA 653 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g-~~ll~sgs~Dg~I~iwDl~~~~---~~-----~~~~~~i~~i~~sp~g~~Ll~gs 653 (786)
.-.++.++.+|...|+++.|.-.| +.-+++|+.|..|.+--..+.. .. ...+..+..+++.|..+++++++
T Consensus 536 ny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~c 615 (1080)
T KOG1408|consen 536 NYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVC 615 (1080)
T ss_pred ccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEe
Confidence 777888999999999999998766 3445699999888765444221 11 12235678899999999999999
Q ss_pred CCCeEEEEEcCCCcEEEEEec---CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCC
Q 044075 654 SENVVSIFDVETDRLTHSFKG---HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSY 729 (786)
Q Consensus 654 ~dg~I~iwD~~t~~~i~~l~~---h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg 729 (786)
.|..|+|||+++++.++.|++ |.+....+..+|.|.||++.+.| ++.++|..+++|+..+.+|...|+.+.|.+|.
T Consensus 616 QDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDC 695 (1080)
T KOG1408|consen 616 QDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDC 695 (1080)
T ss_pred cccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccc
Confidence 999999999999999999986 66778889999999999999999 99999999999999999999999999999999
Q ss_pred CEEEEEECCCeEEEEECCCC
Q 044075 730 PTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 730 ~~L~sgs~dg~I~IwDl~~~ 749 (786)
+.|++.++||.|.||.+...
T Consensus 696 kHlISvsgDgCIFvW~lp~~ 715 (1080)
T KOG1408|consen 696 KHLISVSGDGCIFVWKLPLT 715 (1080)
T ss_pred hhheeecCCceEEEEECchh
Confidence 99999999999999998753
No 106
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.90 E-value=3.8e-22 Score=212.33 Aligned_cols=235 Identities=13% Similarity=0.301 Sum_probs=205.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCee--eeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQT--ECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF 585 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~--~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~ 585 (786)
....|.+|.+.|||+.|++|+.-.+|.|||+..... ...+....-.+..++.+||.+.+++++.||.|.|||+.+..
T Consensus 464 rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~- 542 (705)
T KOG0639|consen 464 RDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQT- 542 (705)
T ss_pred cccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccce-
Confidence 456799999999999999999999999999975443 33444444567889999999999999999999999999866
Q ss_pred eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe--ecCCeEEEEEeCCCCEEEEEECCCeEEEEEc
Q 044075 586 CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI--SKGGTVQVRFQPRLGLLLAAASENVVSIFDV 663 (786)
Q Consensus 586 ~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~--~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~ 663 (786)
.++.|.+|.+.+.||.++++|..|. +|+-|.+|+.||++++..+.. +...|.++.++|.+.++++|-.++.+.|...
T Consensus 543 ~VrqfqGhtDGascIdis~dGtklW-TGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~ 621 (705)
T KOG0639|consen 543 LVRQFQGHTDGASCIDISKDGTKLW-TGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHT 621 (705)
T ss_pred eeecccCCCCCceeEEecCCCceee-cCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEec
Confidence 6899999999999999999998887 999999999999999876644 5578899999999999999999999999887
Q ss_pred CCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEE
Q 044075 664 ETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLE 742 (786)
Q Consensus 664 ~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~ 742 (786)
... ..+.+.-|.+.|.++.|.+.|+++++.+.| .+..|...-|..+...+. ...|.+|.++.+.++|++|+.|..-.
T Consensus 622 skp-~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE-~SsVlsCDIS~ddkyIVTGSGdkkAT 699 (705)
T KOG0639|consen 622 SKP-EKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE-SSSVLSCDISFDDKYIVTGSGDKKAT 699 (705)
T ss_pred CCc-cceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccc-cCcceeeeeccCceEEEecCCCcceE
Confidence 654 344555699999999999999999999999 899999999988877654 58899999999999999999999888
Q ss_pred EEEC
Q 044075 743 LWNM 746 (786)
Q Consensus 743 IwDl 746 (786)
||.+
T Consensus 700 VYeV 703 (705)
T KOG0639|consen 700 VYEV 703 (705)
T ss_pred EEEE
Confidence 8764
No 107
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.90 E-value=6.9e-23 Score=207.13 Aligned_cols=209 Identities=22% Similarity=0.456 Sum_probs=182.8
Q ss_pred eeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC------C-----------cceeeeecCCCCCeEEEEEecCC
Q 044075 544 ECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK------P-----------NFCLQTYTGHNNHVMSLDFHPKK 606 (786)
Q Consensus 544 ~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s------~-----------~~~~~~~~~h~~~V~sl~~sp~g 606 (786)
...+..|..++.+.+|++||.++++|+.|..|+|.|++. . ...++++-.|...|+++.|+|..
T Consensus 105 t~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre 184 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE 184 (430)
T ss_pred eEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence 345678999999999999999999999999999999872 1 13567788899999999999986
Q ss_pred CeEEEEEcCCCcEEEEeCCCCeeeEeec-----CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEe---cCCCC
Q 044075 607 NDLFCSCDGNSEIRFWNLSQYSCARISK-----GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFK---GHSTE 678 (786)
Q Consensus 607 ~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-----~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~---~h~~~ 678 (786)
. ++++++.|++|++||+.+....+.++ ..+.++.|+|.|.+|++|+...++++||+++..+...-. .|...
T Consensus 185 ~-ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~a 263 (430)
T KOG0640|consen 185 T-ILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGA 263 (430)
T ss_pred h-eEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccc
Confidence 5 66699999999999998765544433 678899999999999999999999999999987765543 49999
Q ss_pred EEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc-C-CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEE
Q 044075 679 IHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS-S-GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMT 753 (786)
Q Consensus 679 I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~-~-~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~ 753 (786)
|++|.+++.+++.++++.| .|+|||--+++|+.++.. | +..|.+..|..+++||++.+.|..+++|.+.++.++.
T Consensus 264 i~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~ 341 (430)
T KOG0640|consen 264 ITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLK 341 (430)
T ss_pred eeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEE
Confidence 9999999999999999999 999999999999988864 3 4579999999999999999999999999999998773
No 108
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.90 E-value=4.2e-22 Score=209.54 Aligned_cols=245 Identities=19% Similarity=0.264 Sum_probs=213.9
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcC
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl 580 (786)
.+..++||...|+.+.|+++...+++++.|..|+||.............|..+|+.+..+|.|.||++++.|++..+.|+
T Consensus 253 ~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~ 332 (506)
T KOG0289|consen 253 ILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDI 332 (506)
T ss_pred hhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEc
Confidence 45678999999999999999999999999999999999988888888999999999999999999999999999999999
Q ss_pred CCCcceeeeec-CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee---cCCeEEEEEeCCCCEEEEEECCC
Q 044075 581 AKPNFCLQTYT-GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS---KGGTVQVRFQPRLGLLLAAASEN 656 (786)
Q Consensus 581 ~s~~~~~~~~~-~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~---~~~i~~i~~sp~g~~Ll~gs~dg 656 (786)
+++........ ...-.+++.+|||||- +|.+|..|+.|+|||+.....+..+ .+.+..+.|+.+|-++++++.|+
T Consensus 333 ~~g~~lt~vs~~~s~v~~ts~~fHpDgL-ifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~ 411 (506)
T KOG0289|consen 333 SSGSQLTVVSDETSDVEYTSAAFHPDGL-IFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDG 411 (506)
T ss_pred cCCcEEEEEeeccccceeEEeeEcCCce-EEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCC
Confidence 99874333332 2334689999999975 7779999999999999987765544 47789999999999999999999
Q ss_pred eEEEEEcCCCcEEEEEec-CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECC--CCeeEEEEccCCCceEEEEEeCCCCEE
Q 044075 657 VVSIFDVETDRLTHSFKG-HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLA--SGECIHELSSSGNKFHSCIFHPSYPTL 732 (786)
Q Consensus 657 ~I~iwD~~t~~~i~~l~~-h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~--s~~~i~~l~~~~~~I~sv~fspdg~~L 732 (786)
.|++||++..+...++.. ....|.+++|+..|.||+.++.+ .|++++-. ...++..+..|.+..+.+.|.....++
T Consensus 412 ~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l 491 (506)
T KOG0289|consen 412 SVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYL 491 (506)
T ss_pred eEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEE
Confidence 999999999887777663 33479999999999999999888 88888744 467888888888899999999999999
Q ss_pred EEEECCCeEEEEEC
Q 044075 733 MVIGGYQSLELWNM 746 (786)
Q Consensus 733 ~sgs~dg~I~IwDl 746 (786)
++++.|..++++.+
T Consensus 492 ~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 492 ASTSMDAILRLYAL 505 (506)
T ss_pred eeccchhheEEeec
Confidence 99999999888764
No 109
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=3.7e-21 Score=196.53 Aligned_cols=243 Identities=17% Similarity=0.254 Sum_probs=201.6
Q ss_pred CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEc-CCCcE
Q 044075 541 FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCD-GNSEI 619 (786)
Q Consensus 541 ~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs-~Dg~I 619 (786)
.+..+.+......|+++.|+++|.+|++++.|.+|+|||..+++ .++++..+...|..++|......++.+.. .|.+|
T Consensus 4 ~~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~-~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tI 82 (311)
T KOG1446|consen 4 FRPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGK-QVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTI 82 (311)
T ss_pred cccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCc-eeeEeecccccccEEEEecCCceEEEccCCCCCce
Confidence 44555666677889999999999999999999999999999987 57777777788999999776666664433 48899
Q ss_pred EEEeCCCCeeeEeecC---CeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC
Q 044075 620 RFWNLSQYSCARISKG---GTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ 696 (786)
Q Consensus 620 ~iwDl~~~~~~~~~~~---~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~ 696 (786)
++.++.+.+.++.+.+ .|..++.+|-++.+++++.|++|++||++..++...+.... -..++|+|+|-++|++..
T Consensus 83 ryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~--~pi~AfDp~GLifA~~~~ 160 (311)
T KOG1446|consen 83 RYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG--RPIAAFDPEGLIFALANG 160 (311)
T ss_pred EEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCC--CcceeECCCCcEEEEecC
Confidence 9999999999998875 47889999999999999999999999999887776665333 345789999999999998
Q ss_pred C-eEEEEECCCC--eeEEEEcc---CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCC---CeEEEEE
Q 044075 697 D-SVRVWSLASG--ECIHELSS---SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDC---VISALAQ 766 (786)
Q Consensus 697 D-~I~vwDl~s~--~~i~~l~~---~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~---~V~slaf 766 (786)
. .|++||++.. .+..++.. .....+.+.|+|+|++++.++..+.+++.|.-+|..+ .+..+.. .--+.+|
T Consensus 161 ~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~f 240 (311)
T KOG1446|consen 161 SELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATF 240 (311)
T ss_pred CCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEE
Confidence 8 9999999964 33444433 3677899999999999999999999999999998866 3333322 2257889
Q ss_pred cCCCCEEEEEeCCCcEEEeC
Q 044075 767 SPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 767 spdg~~LaSgs~DG~I~IWd 786 (786)
+||+++|++|+.||+|.||+
T Consensus 241 tPds~Fvl~gs~dg~i~vw~ 260 (311)
T KOG1446|consen 241 TPDSKFVLSGSDDGTIHVWN 260 (311)
T ss_pred CCCCcEEEEecCCCcEEEEE
Confidence 99999999999999999996
No 110
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=1.6e-22 Score=221.63 Aligned_cols=319 Identities=16% Similarity=0.235 Sum_probs=254.2
Q ss_pred ccCCCcceeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEc
Q 044075 459 SLDDNVESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNM 538 (786)
Q Consensus 459 sld~~~~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl 538 (786)
..|..+..++.....||....+.......+. +-..+.++..|.+-|..++...+++.|++++.|-+|++|+.
T Consensus 31 q~da~~~ryLfTgGRDg~i~~W~~~~d~~~~--------s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~ 102 (735)
T KOG0308|consen 31 QLDAPNGRYLFTGGRDGIIRLWSVTQDSNEP--------STPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNA 102 (735)
T ss_pred cccCCCCceEEecCCCceEEEeccccccCCc--------ccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeec
Confidence 3455555677777778888777665443221 11246788899999999999999999999999999999999
Q ss_pred CCC--eeeeecCCCCCCeEEEEE-ccCCCEEEEEeCCCcEEEEcCCCCcc---------eeeeec-CCCCCeEEEEEecC
Q 044075 539 ENF--QTECTPDDHNHIITDVRF-RPNSTQLATSSFDKTVRIWDAAKPNF---------CLQTYT-GHNNHVMSLDFHPK 605 (786)
Q Consensus 539 ~t~--~~~~~l~~h~~~V~sl~f-spdg~~Lasgs~Dg~I~VWdl~s~~~---------~~~~~~-~h~~~V~sl~~sp~ 605 (786)
... -+..++..|.+.|.|+++ -++...+|+|+-|+.|.|||++++.. ....+. ++...|++++.++.
T Consensus 103 ~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t 182 (735)
T KOG0308|consen 103 HKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQT 182 (735)
T ss_pred ccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCc
Confidence 876 577888999999999999 77888999999999999999997621 122233 78899999999988
Q ss_pred CCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEE
Q 044075 606 KNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSV 682 (786)
Q Consensus 606 g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv 682 (786)
+ .+|++|+..+.|++||.++.+.+..+. ..+..+..+.+|..++++++||+|++||+...+++.++..|...|.++
T Consensus 183 ~-t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL 261 (735)
T KOG0308|consen 183 G-TIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWAL 261 (735)
T ss_pred c-eEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEE
Confidence 7 577799999999999999887655544 567788899999999999999999999999999999999999999999
Q ss_pred EEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE---------
Q 044075 683 CWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM--------- 752 (786)
Q Consensus 683 ~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~--------- 752 (786)
..+|+-.++++|+.| .|..=|+++......+.....+|..+..+.+..-+.+++.|+.|+-|...-...+
T Consensus 262 ~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~ 341 (735)
T KOG0308|consen 262 QSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFF 341 (735)
T ss_pred eeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCccccccccCCCCCcc
Confidence 999999999999999 9999999985433344455678888888866666788899999999965432111
Q ss_pred ----------E------EcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 753 ----------T------IAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 753 ----------~------~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
. .......|...+.-.|.++++|=...|.+.+||
T Consensus 342 ~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~gnv~lwD 391 (735)
T KOG0308|consen 342 STDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKGNVALWD 391 (735)
T ss_pred cccCCCccccccCCCceeccCchhhhhhhhhcCcceEeeecCCCCEEEEE
Confidence 0 001111233344455778999999999999997
No 111
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=1e-22 Score=227.00 Aligned_cols=271 Identities=18% Similarity=0.315 Sum_probs=214.1
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCC----eeeeecCC---CCCCeEEEEEcc-CCCEEEEEeCCCcEEEEcCCC
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENF----QTECTPDD---HNHIITDVRFRP-NSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~----~~~~~l~~---h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s 582 (786)
.+.+|..+++-.-|+.++ ...++||.++.. ++...+.. -...+.+|.|.. +.++|||++..|.|.+||+..
T Consensus 41 ~~nAIs~nr~~~qiv~AG-rs~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk 119 (839)
T KOG0269|consen 41 KANAISVNRDINQIVVAG-RSLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNK 119 (839)
T ss_pred ccceEeecCCcceeEEec-ccceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCc
Confidence 466677778877777776 356788877632 22222211 123456788876 567999999999999999987
Q ss_pred --CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCC-CCEEEEEECCC
Q 044075 583 --PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPR-LGLLLAAASEN 656 (786)
Q Consensus 583 --~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~-g~~Ll~gs~dg 656 (786)
....+..|..|...|.+++|++...+++++|+.||+|++||++..+....+. ..+..+.|+|. +..|+++...|
T Consensus 120 ~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG 199 (839)
T KOG0269|consen 120 SIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSG 199 (839)
T ss_pred cccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCc
Confidence 3335668899999999999999999999999999999999999877665554 56788999985 45677888889
Q ss_pred eEEEEEcCCC-cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe--eEEEEccCCCceEEEEEeCCCCEE
Q 044075 657 VVSIFDVETD-RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE--CIHELSSSGNKFHSCIFHPSYPTL 732 (786)
Q Consensus 657 ~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~--~i~~l~~~~~~I~sv~fspdg~~L 732 (786)
.+.+||++.. ++...+..|.++|.|+.|+|++.+||+|+.| .|+|||..+.+ .+.++. ...+|.++.|-|...+.
T Consensus 200 ~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~h 278 (839)
T KOG0269|consen 200 YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTIN-TIAPVGRVKWRPARSYH 278 (839)
T ss_pred eEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEe-ecceeeeeeeccCccch
Confidence 9999999976 5667788899999999999999999999999 99999998754 333332 24789999999998765
Q ss_pred EEEE---CCCeEEEEECCCCeE--EEEcccCCCeEEEEEcC-CCCEEEEEeCCCcEE
Q 044075 733 MVIG---GYQSLELWNMAENKC--MTIAAHDCVISALAQSP-VTGMVASASHDKSVK 783 (786)
Q Consensus 733 ~sgs---~dg~I~IwDl~~~~~--~~~~~h~~~V~slafsp-dg~~LaSgs~DG~I~ 783 (786)
++.+ .|-.|+|||++..-+ ..+..|...|+.++|.. |...|.+|+.||+|.
T Consensus 279 LAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~ 335 (839)
T KOG0269|consen 279 LATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVL 335 (839)
T ss_pred hhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHH
Confidence 5443 356899999987543 37779999999999976 455899999999864
No 112
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=1.4e-22 Score=199.60 Aligned_cols=240 Identities=23% Similarity=0.379 Sum_probs=200.3
Q ss_pred cCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc--ceeeeecCCCCCeEEEEE-ecCCCeEEEEEcCCCcEEEEe
Q 044075 547 PDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN--FCLQTYTGHNNHVMSLDF-HPKKNDLFCSCDGNSEIRFWN 623 (786)
Q Consensus 547 l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~--~~~~~~~~h~~~V~sl~~-sp~g~~ll~sgs~Dg~I~iwD 623 (786)
-..|.+.|.++...--|++|+||+.|++|+|+.+++.. ..+..+.+|.++|+.++| +|.-..+|++|+.||.|.||.
T Consensus 7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk 86 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK 86 (299)
T ss_pred hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence 35788899988888889999999999999999998766 567889999999999999 566677899999999999999
Q ss_pred CCCCeee-----EeecCCeEEEEEeCC--CCEEEEEECCCeEEEEEcCCC---cEEEEEecCCCCEEEEEEcCC---C--
Q 044075 624 LSQYSCA-----RISKGGTVQVRFQPR--LGLLLAAASENVVSIFDVETD---RLTHSFKGHSTEIHSVCWDTN---G-- 688 (786)
Q Consensus 624 l~~~~~~-----~~~~~~i~~i~~sp~--g~~Ll~gs~dg~I~iwD~~t~---~~i~~l~~h~~~I~sv~~spd---g-- 688 (786)
-..+.-. ..+...+.+++|.|. |-.|++++.||.|.|++.+.. ...+....|.-.|++++|.|- |
T Consensus 87 e~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~ 166 (299)
T KOG1332|consen 87 EENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSL 166 (299)
T ss_pred cCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccc
Confidence 8876433 234577889998775 457899999999999998765 233345569999999999985 4
Q ss_pred ---------CEEEEEeCC-eEEEEECCCCe--eEEEEccCCCceEEEEEeCCC----CEEEEEECCCeEEEEECCCC---
Q 044075 689 ---------EYLASVSQD-SVRVWSLASGE--CIHELSSSGNKFHSCIFHPSY----PTLMVIGGYQSLELWNMAEN--- 749 (786)
Q Consensus 689 ---------~~Lasgs~D-~I~vwDl~s~~--~i~~l~~~~~~I~sv~fspdg----~~L~sgs~dg~I~IwDl~~~--- 749 (786)
+.|++|+.| .|+||+..++. .-.++..|.+.|+.++|.|.- .+|++++.||+|.||..+..
T Consensus 167 ~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~ 246 (299)
T KOG1332|consen 167 VDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEP 246 (299)
T ss_pred cccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCc
Confidence 569999999 99999998763 445688999999999999964 47999999999999976632
Q ss_pred -eEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 750 -KCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 750 -~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+...+......++.+.||..|++|+.++.|+.|.+|+
T Consensus 247 wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwk 284 (299)
T KOG1332|consen 247 WKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWK 284 (299)
T ss_pred ccccccccCCcceEEEEEeccccEEEEecCCcEEEEEE
Confidence 2224445678899999999999999999999999995
No 113
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.89 E-value=9.9e-22 Score=216.92 Aligned_cols=262 Identities=15% Similarity=0.300 Sum_probs=218.4
Q ss_pred CCcceeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEE-EEEcC-CCCEEEEEECCCeEEEEEcC
Q 044075 462 DNVESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTC-CHFSS-DGKLLASAGHDKKVVVWNME 539 (786)
Q Consensus 462 ~~~~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~-lafSp-dg~~Lasgs~Dg~V~IWdl~ 539 (786)
......+.....|++..+|.-+ .-.|.+...+.+|.+-|.+ ++|-+ ++-.|++|+.|.+|.+|...
T Consensus 22 ~~~~~~i~s~sRd~t~~vw~~~------------~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~ 89 (745)
T KOG0301|consen 22 VTDGVCIISGSRDGTVKVWAKK------------GKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLS 89 (745)
T ss_pred ecCCeEEeecCCCCceeeeecc------------CcccccceecccCcceeeccceeccccCcceEeecccceEEEEecC
Confidence 3344455555556666665422 2245566678889988888 88875 55579999999999999999
Q ss_pred CCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcE
Q 044075 540 NFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEI 619 (786)
Q Consensus 540 t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I 619 (786)
...+..++.+|...|+|++...++. +++||.|.+++||.... +...+.+|...|+++.+.|++ .+++|+.|.+|
T Consensus 90 ~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~---l~~~l~gH~asVWAv~~l~e~--~~vTgsaDKtI 163 (745)
T KOG0301|consen 90 QAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGE---LVYSLQGHTASVWAVASLPEN--TYVTGSADKTI 163 (745)
T ss_pred CCCchhhhhccccceeeeecCCcCc-eEecccccceEEecchh---hhcccCCcchheeeeeecCCC--cEEeccCccee
Confidence 9999999999999999999887776 99999999999998754 455689999999999999887 55699999999
Q ss_pred EEEeCCCCeeeEeecC---CeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC
Q 044075 620 RFWNLSQYSCARISKG---GTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ 696 (786)
Q Consensus 620 ~iwDl~~~~~~~~~~~---~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~ 696 (786)
++|.- +++++.+++ .+..+++-++ ..|++++.||.|++|++ +++++..+.+|...|.++....++..++++++
T Consensus 164 klWk~--~~~l~tf~gHtD~VRgL~vl~~-~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gE 239 (745)
T KOG0301|consen 164 KLWKG--GTLLKTFSGHTDCVRGLAVLDD-SHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGE 239 (745)
T ss_pred eeccC--CchhhhhccchhheeeeEEecC-CCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecC
Confidence 99986 455555554 4566677665 46889999999999999 78899999999999999998889999999999
Q ss_pred C-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 697 D-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 697 D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
| +++||+.. ++...+..+...|+++.+-++|. |++|+.||.||||..+.
T Consensus 240 DrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 240 DRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDK 289 (745)
T ss_pred CceEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEecc
Confidence 9 99999987 78888888888999999998887 89999999999998764
No 114
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.89 E-value=4.9e-22 Score=210.98 Aligned_cols=247 Identities=21% Similarity=0.398 Sum_probs=202.3
Q ss_pred eEEeecCCCCeEEEEEcCC-CCEEEEEECCCeEEEEEcCCC----------eeeeecCCCCCCeEEEEEccC-CCEEEEE
Q 044075 502 VSSIRKSSSKVTCCHFSSD-GKLLASAGHDKKVVVWNMENF----------QTECTPDDHNHIITDVRFRPN-STQLATS 569 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpd-g~~Lasgs~Dg~V~IWdl~t~----------~~~~~l~~h~~~V~sl~fspd-g~~Lasg 569 (786)
+.....|.+.|+.+.+-|. ..++|+.+..+.|.|||..+. .+..++.+|...-++++|++. .-.|+++
T Consensus 117 i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~ 196 (422)
T KOG0264|consen 117 ISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSG 196 (422)
T ss_pred EEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeec
Confidence 3344569999999999994 556778888999999998642 223367889988889999984 4479999
Q ss_pred eCCCcEEEEcCCCCcc------eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC--Cee---eEeecCCeE
Q 044075 570 SFDKTVRIWDAAKPNF------CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ--YSC---ARISKGGTV 638 (786)
Q Consensus 570 s~Dg~I~VWdl~s~~~------~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~--~~~---~~~~~~~i~ 638 (786)
+.|++|++||+..... ....+.+|...|..++|++....+|++++.|+.+.|||+++ .++ ...+.+.+.
T Consensus 197 ~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn 276 (422)
T KOG0264|consen 197 SDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVN 276 (422)
T ss_pred cCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCcee
Confidence 9999999999975432 35578899999999999999999999999999999999995 222 334457899
Q ss_pred EEEEeCCCCE-EEEEECCCeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCCC-CEEEEEeCC-eEEEEECCCC-------
Q 044075 639 QVRFQPRLGL-LLAAASENVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTNG-EYLASVSQD-SVRVWSLASG------- 707 (786)
Q Consensus 639 ~i~~sp~g~~-Ll~gs~dg~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spdg-~~Lasgs~D-~I~vwDl~s~------- 707 (786)
+++|+|.+.+ |++|+.|++|.+||+|+. .+++++.+|...|.+|.|+|+. ..|++++.| .+.|||+..-
T Consensus 277 ~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~e 356 (422)
T KOG0264|consen 277 CVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPE 356 (422)
T ss_pred EEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChh
Confidence 9999997665 666677999999999986 6788999999999999999965 577888888 9999999741
Q ss_pred -------eeEEEEccCCCceEEEEEeCCCCE-EEEEECCCeEEEEECCC
Q 044075 708 -------ECIHELSSSGNKFHSCIFHPSYPT-LMVIGGYQSLELWNMAE 748 (786)
Q Consensus 708 -------~~i~~l~~~~~~I~sv~fspdg~~-L~sgs~dg~I~IwDl~~ 748 (786)
+++..-.+|...|..+.|+|..+. |++.+.|+.+.||.+..
T Consensus 357 da~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 357 DAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred hhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 345566788999999999999886 55667788999999864
No 115
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.89 E-value=6.5e-22 Score=210.08 Aligned_cols=239 Identities=21% Similarity=0.373 Sum_probs=196.6
Q ss_pred CCCCCCeEEEEEccC-CCEEEEEeCCCcEEEEcCCCCcc---------eeeeecCCCCCeEEEEEecCCCeEEEEEcCCC
Q 044075 548 DDHNHIITDVRFRPN-STQLATSSFDKTVRIWDAAKPNF---------CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS 617 (786)
Q Consensus 548 ~~h~~~V~sl~fspd-g~~Lasgs~Dg~I~VWdl~s~~~---------~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg 617 (786)
..|.+.|+.+++-|. ..++++.+..+.|.|||..+... +-..+.+|...-++++|++.....+++++.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 468899999999994 55777788899999999865321 12267889888889999999888888999999
Q ss_pred cEEEEeCCCCee-------eE---eecCCeEEEEEeCCC-CEEEEEECCCeEEEEEcC--CCcEEEEEecCCCCEEEEEE
Q 044075 618 EIRFWNLSQYSC-------AR---ISKGGTVQVRFQPRL-GLLLAAASENVVSIFDVE--TDRLTHSFKGHSTEIHSVCW 684 (786)
Q Consensus 618 ~I~iwDl~~~~~-------~~---~~~~~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~--t~~~i~~l~~h~~~I~sv~~ 684 (786)
.|++||+..... .. .+...+..++|++.. ..|.+++.|+.+.|||+| +.++.+...+|...|+|++|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 999999975332 11 223566778998865 457778889999999999 56777788899999999999
Q ss_pred cC-CCCEEEEEeCC-eEEEEECCCC-eeEEEEccCCCceEEEEEeCCC-CEEEEEECCCeEEEEECCCC-e---------
Q 044075 685 DT-NGEYLASVSQD-SVRVWSLASG-ECIHELSSSGNKFHSCIFHPSY-PTLMVIGGYQSLELWNMAEN-K--------- 750 (786)
Q Consensus 685 sp-dg~~Lasgs~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~fspdg-~~L~sgs~dg~I~IwDl~~~-~--------- 750 (786)
+| ++.+||+|+.| +|++||+++- +++.++.+|...|.++.|+|+. ..|++++.|+.+.|||+..- +
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~d 360 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAED 360 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhcc
Confidence 99 45677888988 9999999985 6889999999999999999976 56778889999999998641 1
Q ss_pred -----EEEEcccCCCeEEEEEcCCCC-EEEEEeCCCcEEEeC
Q 044075 751 -----CMTIAAHDCVISALAQSPVTG-MVASASHDKSVKIWK 786 (786)
Q Consensus 751 -----~~~~~~h~~~V~slafspdg~-~LaSgs~DG~I~IWd 786 (786)
++..-+|...|..+.|+|... .|+|+++|+.+.||+
T Consensus 361 gppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~ 402 (422)
T KOG0264|consen 361 GPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQ 402 (422)
T ss_pred CCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEee
Confidence 135568999999999999887 678899999999996
No 116
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=3e-22 Score=197.17 Aligned_cols=242 Identities=21% Similarity=0.334 Sum_probs=200.4
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC---eeeeecCCCCCCeEEEEEcc--CCCEEEEEeCCCcEEEEcC
Q 044075 506 RKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF---QTECTPDDHNHIITDVRFRP--NSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 506 ~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~---~~~~~l~~h~~~V~sl~fsp--dg~~Lasgs~Dg~I~VWdl 580 (786)
..|.+-|..+...-.|+.||||+.|++|+|+.+.+. +.+.++.+|.++|..++|.. -|.+|+++++||.|.||.-
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke 87 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE 87 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence 358888998888888999999999999999999753 57889999999999999976 7899999999999999998
Q ss_pred CCCcce-eeeecCCCCCeEEEEEecCC-CeEEEEEcCCCcEEEEeCCCC------eeeEeecCCeEEEEEeCC---C---
Q 044075 581 AKPNFC-LQTYTGHNNHVMSLDFHPKK-NDLFCSCDGNSEIRFWNLSQY------SCARISKGGTVQVRFQPR---L--- 646 (786)
Q Consensus 581 ~s~~~~-~~~~~~h~~~V~sl~~sp~g-~~ll~sgs~Dg~I~iwDl~~~------~~~~~~~~~i~~i~~sp~---g--- 646 (786)
.++... ......|...|++++|.|.+ ..+|++++.||.|.+.+++.. +....+.-++.+++|.|. |
T Consensus 88 ~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~ 167 (299)
T KOG1332|consen 88 ENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLV 167 (299)
T ss_pred CCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCcccc
Confidence 887532 34567899999999999975 345667788999999988754 233445577889999876 4
Q ss_pred --------CEEEEEECCCeEEEEEcCCC--cEEEEEecCCCCEEEEEEcCCC----CEEEEEeCC-eEEEEECCCC-e--
Q 044075 647 --------GLLLAAASENVVSIFDVETD--RLTHSFKGHSTEIHSVCWDTNG----EYLASVSQD-SVRVWSLASG-E-- 708 (786)
Q Consensus 647 --------~~Ll~gs~dg~I~iwD~~t~--~~i~~l~~h~~~I~sv~~spdg----~~Lasgs~D-~I~vwDl~s~-~-- 708 (786)
+.|++|+.|+.|+||+...+ +..+.+.+|...|..++|.|.- .+|++|+.| +|.||..+.. +
T Consensus 168 ~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~w 247 (299)
T KOG1332|consen 168 DQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPW 247 (299)
T ss_pred ccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcc
Confidence 56999999999999999876 3445688999999999999964 589999999 9999987632 1
Q ss_pred eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 709 CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 709 ~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
....++.....+..+.|+..|+.|++++.|+.|.+|.-.
T Consensus 248 k~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 248 KKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred cccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence 122333346789999999999999999999999999754
No 117
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.89 E-value=2.3e-21 Score=205.70 Aligned_cols=228 Identities=21% Similarity=0.371 Sum_probs=194.2
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc
Q 044075 506 RKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF 585 (786)
Q Consensus 506 ~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~ 585 (786)
++|...|.|++.|+||+|||+|+.|..|.||+..+.+.+..+.+|.+.|.+++|-.....|++++.|++|++|+++...+
T Consensus 199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~ 278 (479)
T KOG0299|consen 199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSY 278 (479)
T ss_pred ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHH
Confidence 48999999999999999999999999999999999999999999999999999998888999999999999999988764
Q ss_pred eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe--ecCCeEEEEEeCCCCEEEEEECCCeEEEEEc
Q 044075 586 CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI--SKGGTVQVRFQPRLGLLLAAASENVVSIFDV 663 (786)
Q Consensus 586 ~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~--~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~ 663 (786)
+.++.+|.+.|.+|..... ..++.+|+.|+++++|++.....+.. ..+.+.|++|-.+ .+|++|+.+|.|.+|++
T Consensus 279 -vetlyGHqd~v~~IdaL~r-eR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~ 355 (479)
T KOG0299|consen 279 -VETLYGHQDGVLGIDALSR-ERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSL 355 (479)
T ss_pred -HHHHhCCccceeeechhcc-cceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeee
Confidence 7788899999999998754 45676778999999999965433322 2345677777544 68999999999999999
Q ss_pred CCCcEEEEEec-C-----------CCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC----eeEEEEccCCCceEEEEEe
Q 044075 664 ETDRLTHSFKG-H-----------STEIHSVCWDTNGEYLASVSQD-SVRVWSLASG----ECIHELSSSGNKFHSCIFH 726 (786)
Q Consensus 664 ~t~~~i~~l~~-h-----------~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~----~~i~~l~~~~~~I~sv~fs 726 (786)
-+.+++++... | ..+|++++..|..+++++|+.+ .|++|-+..+ .++..+. -.+.|++++|+
T Consensus 356 ~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~ 434 (479)
T KOG0299|consen 356 LKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFS 434 (479)
T ss_pred cccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEc
Confidence 99988877642 2 2389999999999999999999 9999999887 4555554 46889999999
Q ss_pred CCCCEEEEEEC
Q 044075 727 PSYPTLMVIGG 737 (786)
Q Consensus 727 pdg~~L~sgs~ 737 (786)
++|+.|++|..
T Consensus 435 ~sgk~ivagiG 445 (479)
T KOG0299|consen 435 NSGKRIVAGIG 445 (479)
T ss_pred cCCCEEEEecc
Confidence 99997777644
No 118
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.89 E-value=6.8e-21 Score=216.17 Aligned_cols=271 Identities=16% Similarity=0.250 Sum_probs=217.6
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC-eeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc
Q 044075 506 RKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF-QTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN 584 (786)
Q Consensus 506 ~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~-~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~ 584 (786)
..|+..-+.|+|.|+|++|++++.||.|++|+.... +...++..+...|.+++.. +.+|++|+.+++|.+|.+.++.
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~~ 87 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPSGE 87 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCCCCC
Confidence 369999999999999999999999999999998765 5555555588888888865 5589999999999999998876
Q ss_pred ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe---eeEeecCCeEEEEEeCCCCEEEEEECCCeEEEE
Q 044075 585 FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS---CARISKGGTVQVRFQPRLGLLLAAASENVVSIF 661 (786)
Q Consensus 585 ~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~---~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iw 661 (786)
. -..+....-++.+++|+-+|+.++ .|+.|-.|++.+..... ..+.+++.+.++.|+|.+.+|++.+.||.|++|
T Consensus 88 ~-~~iL~Rftlp~r~~~v~g~g~~ia-agsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw 165 (933)
T KOG1274|consen 88 E-DTILARFTLPIRDLAVSGSGKMIA-AGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIW 165 (933)
T ss_pred c-cceeeeeeccceEEEEecCCcEEE-eecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEE
Confidence 3 334555667899999998877554 88889999999887654 445566889999999999999999999999999
Q ss_pred EcCCCcEEEEEec-------C-CCCEEEEEEcCCCCEEEE-EeCCeEEEEECCCCeeEEEEcc--CCCceEEEEEeCCCC
Q 044075 662 DVETDRLTHSFKG-------H-STEIHSVCWDTNGEYLAS-VSQDSVRVWSLASGECIHELSS--SGNKFHSCIFHPSYP 730 (786)
Q Consensus 662 D~~t~~~i~~l~~-------h-~~~I~sv~~spdg~~Las-gs~D~I~vwDl~s~~~i~~l~~--~~~~I~sv~fspdg~ 730 (786)
|+.++.+.+.+.+ . ...+..++|+|++..|++ +.++.|++|+...++....+.. +...+..+.|+|+|.
T Consensus 166 ~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~ 245 (933)
T KOG1274|consen 166 DLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGK 245 (933)
T ss_pred EcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCc
Confidence 9999877766653 1 345677899999555555 4555999999999988877764 344589999999999
Q ss_pred EEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEE
Q 044075 731 TLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVK 783 (786)
Q Consensus 731 ~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~ 783 (786)
||++++.+|.|.|||..+-. .......|.+++|.|+.+.|-.-..-|..-
T Consensus 246 YiAAs~~~g~I~vWnv~t~~---~~~~~~~Vc~~aw~p~~n~it~~~~~g~~~ 295 (933)
T KOG1274|consen 246 YIAASTLDGQILVWNVDTHE---RHEFKRAVCCEAWKPNANAITLITALGTLG 295 (933)
T ss_pred EEeeeccCCcEEEEecccch---hccccceeEEEecCCCCCeeEEEeeccccc
Confidence 99999999999999999722 233456899999999988665544444433
No 119
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.89 E-value=1.9e-22 Score=207.97 Aligned_cols=261 Identities=16% Similarity=0.283 Sum_probs=217.5
Q ss_pred EeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec
Q 044075 468 LSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP 547 (786)
Q Consensus 468 l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l 547 (786)
++....||...+|++... .++.+++.|.+.|..|++.. ..+++++.|.+|+.|.++- ....++
T Consensus 82 ~aSGs~DG~VkiWnlsqR--------------~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~-~p~~ti 144 (433)
T KOG0268|consen 82 VASGSCDGEVKIWNLSQR--------------ECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG-PPLHTI 144 (433)
T ss_pred hhccccCceEEEEehhhh--------------hhhheeecccCceeeEEecc--cceEEecCCcceeeeeccC-Ccceee
Confidence 445566888888876633 56778999999999999987 5788899999999999875 355555
Q ss_pred CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC
Q 044075 548 DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY 627 (786)
Q Consensus 548 ~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~ 627 (786)
.+ .+.+..|.-+..+..++||+.+ |.|||..... ++..+.-....|.++.|+|....+|++|..|+.|.+||++..
T Consensus 145 lg-~s~~~gIdh~~~~~~FaTcGe~--i~IWD~~R~~-Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~ 220 (433)
T KOG0268|consen 145 LG-KSVYLGIDHHRKNSVFATCGEQ--IDIWDEQRDN-PVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQA 220 (433)
T ss_pred ec-cccccccccccccccccccCce--eeecccccCC-ccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccC
Confidence 33 3467778777778889999864 9999998765 577777777889999999999999999999999999999998
Q ss_pred eeeEe--ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEE
Q 044075 628 SCARI--SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWS 703 (786)
Q Consensus 628 ~~~~~--~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwD 703 (786)
..+.. .......|+|+|..-.|+++..|..++.||++.. .++..+.+|.+.|.+|.|+|.|.-|++||.| +|+||.
T Consensus 221 ~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~ 300 (433)
T KOG0268|consen 221 SPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFP 300 (433)
T ss_pred CccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEee
Confidence 87654 3466788999998778899999999999999976 6788888999999999999999999999999 999999
Q ss_pred CCCCeeEEEEccC-CCceEEEEEeCCCCEEEEEECCCeEEEEECCCC
Q 044075 704 LASGECIHELSSS-GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 704 l~s~~~i~~l~~~-~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~ 749 (786)
++.+.....+... -..|.++.|+.|.+|+++|+.|+.|++|.....
T Consensus 301 ~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~As 347 (433)
T KOG0268|consen 301 VNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKAS 347 (433)
T ss_pred cCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchh
Confidence 9887654433222 246899999999999999999999999986643
No 120
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.88 E-value=7.9e-20 Score=195.33 Aligned_cols=284 Identities=18% Similarity=0.350 Sum_probs=222.7
Q ss_pred eeeeeEEeecCC-CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEE
Q 044075 498 SFNEVSSIRKSS-SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVR 576 (786)
Q Consensus 498 ~~~~v~~l~~H~-~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~ 576 (786)
-++....++++. .-|.|++|.++|. ++||.++|.|.||+..+.+..+....|.+.|.+++...+|. |++|+.|..|.
T Consensus 234 l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~Gt-llSGgKDRki~ 311 (626)
T KOG2106|consen 234 LVKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGT-LLSGGKDRKII 311 (626)
T ss_pred eEEEeeccccccceEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCcc-EeecCccceEE
Confidence 344455555443 5799999999987 77999999999999998888887779999999999999997 55599999999
Q ss_pred EEcCCCCc----------------------c-----------------eeeeecCCCCCeEEEEEecCCCeEEEEEcCCC
Q 044075 577 IWDAAKPN----------------------F-----------------CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS 617 (786)
Q Consensus 577 VWdl~s~~----------------------~-----------------~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg 617 (786)
.||-.-.+ . ......+|....+.++.+|+.+.++ +|+.|+
T Consensus 312 ~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~-T~gqdk 390 (626)
T KOG2106|consen 312 LWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLL-TCGQDK 390 (626)
T ss_pred eccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhhee-eccCcc
Confidence 99832110 0 0011236888889999999877555 999999
Q ss_pred cEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC
Q 044075 618 EIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD 697 (786)
Q Consensus 618 ~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D 697 (786)
.+++|+-....-.+.+..+..++.|+|.| .+++|+..|...+.|.++...+..-.. ..+++++.|+|+|.+|+.|+.|
T Consensus 391 ~v~lW~~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d 468 (626)
T KOG2106|consen 391 HVRLWNDHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHD 468 (626)
T ss_pred eEEEccCCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCC
Confidence 99999954455566777899999999999 999999999999999999666655554 8999999999999999999999
Q ss_pred -eEEEEECCCC-eeEE-EEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe--------------E---------
Q 044075 698 -SVRVWSLASG-ECIH-ELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK--------------C--------- 751 (786)
Q Consensus 698 -~I~vwDl~s~-~~i~-~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~--------------~--------- 751 (786)
.|+||-+... ..+. .-+.+..+|+.+.|++|+++|.+-+.|-.|..|....-+ |
T Consensus 469 ~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~ 548 (626)
T KOG2106|consen 469 NHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGG 548 (626)
T ss_pred CeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecc
Confidence 9999988753 3332 223445899999999999999999999999999543211 0
Q ss_pred -----------------------------------------EEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 752 -----------------------------------------MTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 752 -----------------------------------------~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
....+|.+.|++++|..+...|++.+.|..|..|+
T Consensus 549 s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~ 624 (626)
T KOG2106|consen 549 SDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWR 624 (626)
T ss_pred cCCchHHHhhhhhhhhhhhccccCceEEEEccccCCCcccceeeccccceeEEEEEeeCCceEEecCCCceEEEEE
Confidence 02345677788888877777777777888887775
No 121
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=4e-21 Score=194.82 Aligned_cols=252 Identities=16% Similarity=0.317 Sum_probs=190.6
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcC----CCeeeeecCCCCCCeEEEEEcc--CCCEEEEEeCCCcEEEEc
Q 044075 506 RKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNME----NFQTECTPDDHNHIITDVRFRP--NSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 506 ~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~----t~~~~~~l~~h~~~V~sl~fsp--dg~~Lasgs~Dg~I~VWd 579 (786)
.+|.+-|.|+.|.+.|+.+|+|+.|++|+|||.+ +..+....+.|.+.|..|.|.+ -|..+|++++|+++.||.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 3688999999999999999999999999999964 4567777889999999999976 588999999999999997
Q ss_pred CCCCc--------ceeeeecCCCCCeEEEEEecCC-CeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEE
Q 044075 580 AAKPN--------FCLQTYTGHNNHVMSLDFHPKK-NDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLL 650 (786)
Q Consensus 580 l~s~~--------~~~~~~~~h~~~V~sl~~sp~g-~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll 650 (786)
-.... ....++....+.|+++.|.|.. ...+++++.||.|+||+.-...
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~---------------------- 147 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPM---------------------- 147 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCcc----------------------
Confidence 52111 1233555667788888888864 3456677788888888754321
Q ss_pred EEECCCeEEEEEcCCC--cEEEEEecCCCCEEEEEEcCC---CCEEEEEeCC------eEEEEECCCC----eeEEEEcc
Q 044075 651 AAASENVVSIFDVETD--RLTHSFKGHSTEIHSVCWDTN---GEYLASVSQD------SVRVWSLASG----ECIHELSS 715 (786)
Q Consensus 651 ~gs~dg~I~iwD~~t~--~~i~~l~~h~~~I~sv~~spd---g~~Lasgs~D------~I~vwDl~s~----~~i~~l~~ 715 (786)
.+.-|.+... ..+.....+..+..||.|++. ..+|++|+.+ .++||..... ..+.++..
T Consensus 148 ------nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d 221 (361)
T KOG2445|consen 148 ------NLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPD 221 (361)
T ss_pred ------ccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCC
Confidence 1122222111 000011136667889999874 4578888877 6889877643 35667789
Q ss_pred CCCceEEEEEeCC----CCEEEEEECCCeEEEEECCCCe---------------------EEEEcccCCCeEEEEEcCCC
Q 044075 716 SGNKFHSCIFHPS----YPTLMVIGGYQSLELWNMAENK---------------------CMTIAAHDCVISALAQSPVT 770 (786)
Q Consensus 716 ~~~~I~sv~fspd----g~~L~sgs~dg~I~IwDl~~~~---------------------~~~~~~h~~~V~slafspdg 770 (786)
|..+|+.++|.|+ ...|++++.|| |+||++.... +..+..|.+.|+.+.|.-.|
T Consensus 222 ~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtG 300 (361)
T KOG2445|consen 222 HTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTG 300 (361)
T ss_pred CCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeee
Confidence 9999999999995 35789999999 9999987311 11456899999999999999
Q ss_pred CEEEEEeCCCcEEEeC
Q 044075 771 GMVASASHDKSVKIWK 786 (786)
Q Consensus 771 ~~LaSgs~DG~I~IWd 786 (786)
.+|++.|+||+||+|+
T Consensus 301 tiLsStGdDG~VRLWk 316 (361)
T KOG2445|consen 301 TILSSTGDDGCVRLWK 316 (361)
T ss_pred eEEeecCCCceeeehh
Confidence 9999999999999996
No 122
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.88 E-value=6e-21 Score=192.14 Aligned_cols=277 Identities=19% Similarity=0.407 Sum_probs=215.7
Q ss_pred eecCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcCCCe----------eeee-----cCCCCCCeEEEEEcc-CCCEEE
Q 044075 505 IRKSSSKVTCCHFSS-DGKLLASAGHDKKVVVWNMENFQ----------TECT-----PDDHNHIITDVRFRP-NSTQLA 567 (786)
Q Consensus 505 l~~H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t~~----------~~~~-----l~~h~~~V~sl~fsp-dg~~La 567 (786)
.+.|.+.|+++.+.+ .|+++++|+.||.|.|||+++.. .+.. -.+|...|.++.|-| |...|.
T Consensus 39 ~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFt 118 (397)
T KOG4283|consen 39 VRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFT 118 (397)
T ss_pred eccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceee
Confidence 345999999999998 78999999999999999998432 1111 146888999999999 666889
Q ss_pred EEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecC--CCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEE
Q 044075 568 TSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPK--KNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRF 642 (786)
Q Consensus 568 sgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~--g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~ 642 (786)
+++.|.+++|||..+... ...|+ ..+.|.+-+++|- ...|+++|..|-.|++-|+.++.+...+. +.+..+.|
T Consensus 119 ssSFDhtlKVWDtnTlQ~-a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~W 196 (397)
T KOG4283|consen 119 SSSFDHTLKVWDTNTLQE-AVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEW 196 (397)
T ss_pred cccccceEEEeeccccee-eEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEe
Confidence 999999999999998663 33333 4577888888875 35788888999999999999998877655 67899999
Q ss_pred eCCCCE-EEEEECCCeEEEEEcCCC-cEEEEE--------------ecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECC
Q 044075 643 QPRLGL-LLAAASENVVSIFDVETD-RLTHSF--------------KGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLA 705 (786)
Q Consensus 643 sp~g~~-Ll~gs~dg~I~iwD~~t~-~~i~~l--------------~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~ 705 (786)
+|...+ |++|+.||.|++||++.- .+...+ ..|.+.|++++|+.++.++++++.| .+++|+..
T Consensus 197 sp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~ 276 (397)
T KOG4283|consen 197 SPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNME 276 (397)
T ss_pred ccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecc
Confidence 999887 566778999999999864 233222 2477889999999999999999988 99999998
Q ss_pred CCeeEE-EEc--cCC----CceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEe
Q 044075 706 SGECIH-ELS--SSG----NKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASAS 777 (786)
Q Consensus 706 s~~~i~-~l~--~~~----~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs 777 (786)
+|+... .+- .|. -.+. +. +.+...++..-.++.+.++++-++..+ .+..|-..|.|.++-|+-..+.++.
T Consensus 277 ~G~ntl~~~g~~~~n~~~~~~~~-~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg~ 354 (397)
T KOG4283|consen 277 SGRNTLREFGPIIHNQTTSFAVH-IQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTGD 354 (397)
T ss_pred cCcccccccccccccccccceEE-Ee-ecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCchhhhhccc
Confidence 875321 110 111 1111 22 334445555566689999999888877 5568888999999999999999999
Q ss_pred CCCcEEEe
Q 044075 778 HDKSVKIW 785 (786)
Q Consensus 778 ~DG~I~IW 785 (786)
.|+.|..|
T Consensus 355 ~d~ni~~w 362 (397)
T KOG4283|consen 355 MNGNIYMW 362 (397)
T ss_pred cCCccccc
Confidence 99999888
No 123
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=4e-23 Score=228.43 Aligned_cols=251 Identities=22% Similarity=0.423 Sum_probs=220.4
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEE
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSL 600 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl 600 (786)
..+++.+..+-.++|||.. .+..|...|.|+..-..++.+++|+.|..+-+|.+.... .+..+.+|..+|.|+
T Consensus 4 ~~~~m~~~~~t~Lr~~~~~------~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~-~i~S~~~hespIeSl 76 (825)
T KOG0267|consen 4 MEFLMKTKRATKLRVWDTR------EFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPN-AITSLTGHESPIESL 76 (825)
T ss_pred ccccceeeeeeccccccch------hhhhhhhhhceeeeeccceeeccCCCceeeccccccCCc-hhheeeccCCcceee
Confidence 3455555566678888864 345688888888887788899999999999999998766 466789999999999
Q ss_pred EEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCC
Q 044075 601 DFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHST 677 (786)
Q Consensus 601 ~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~ 677 (786)
.|++. ..++++|+.+|+|++||++..+.++.+. ..+..+.|+|.+.+++.++.|+.+.+||++...+.+.+.+|..
T Consensus 77 ~f~~~-E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~ 155 (825)
T KOG0267|consen 77 TFDTS-ERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTR 155 (825)
T ss_pred ecCcc-hhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcc
Confidence 99976 4577799999999999999888776554 4578889999999999999999999999999899999999999
Q ss_pred CEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEc
Q 044075 678 EIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIA 755 (786)
Q Consensus 678 ~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~ 755 (786)
.|.++.|+|+|++++++++| +++|||+..|+.+.+|..|.+.+..+.|+|..-.++.|+.|++|++||+++...+ ...
T Consensus 156 vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~ 235 (825)
T KOG0267|consen 156 VVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGK 235 (825)
T ss_pred eeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccC
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999999988777 334
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCC
Q 044075 756 AHDCVISALAQSPVTGMVASASHD 779 (786)
Q Consensus 756 ~h~~~V~slafspdg~~LaSgs~D 779 (786)
.....|.+++|+|++..+++|..+
T Consensus 236 ~~~~~v~~~~fn~~~~~~~~G~q~ 259 (825)
T KOG0267|consen 236 PETDGVRSLAFNPDGKIVLSGEQI 259 (825)
T ss_pred CccCCceeeeecCCceeeecCchh
Confidence 457789999999999999888665
No 124
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.88 E-value=1.2e-20 Score=208.32 Aligned_cols=281 Identities=21% Similarity=0.307 Sum_probs=226.0
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe----e---eeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 505 IRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ----T---ECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 505 l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~----~---~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
+.||.+-|.++.|+|++..|++++.|.++.||.-++.. . +-...+.........|+|+++.+++-++.|..++
T Consensus 263 l~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hl 342 (764)
T KOG1063|consen 263 LMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHL 342 (764)
T ss_pred hcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEE
Confidence 44999999999999999999999999999999876542 1 1222344566889999999999999999999999
Q ss_pred EcCCCCcc--eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee-------eEeecCCeEEEEEeCCCCE
Q 044075 578 WDAAKPNF--CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC-------ARISKGGTVQVRFQPRLGL 648 (786)
Q Consensus 578 Wdl~s~~~--~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~-------~~~~~~~i~~i~~sp~g~~ 648 (786)
|...+... ......+|...|.+++|+|.|.+++ +.+.|-+-++|-.-..+. ..++-....|+++-+..-.
T Consensus 343 Wkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflL-svs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~ 421 (764)
T KOG1063|consen 343 WKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLL-SVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQ 421 (764)
T ss_pred EeccCccceeeccccccccccceeeeecCCCCEEE-EeccccceeeecccccccceeeecccccccccceeeehccCCce
Confidence 98443322 2345679999999999999999777 888899999886542111 1122345677888776667
Q ss_pred EEEEECCCeEEEEEcC-------------------------------------------CCc------------------
Q 044075 649 LLAAASENVVSIFDVE-------------------------------------------TDR------------------ 667 (786)
Q Consensus 649 Ll~gs~dg~I~iwD~~-------------------------------------------t~~------------------ 667 (786)
|++|..+..+++|+.. ++.
T Consensus 422 FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ 501 (764)
T KOG1063|consen 422 FVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELT 501 (764)
T ss_pred eeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhcc
Confidence 8888888888888542 000
Q ss_pred ---------------EEEEEecCCCCEEEEEEcCCCCEEEEEeCC------eEEEEECCCCeeEEEEccCCCceEEEEEe
Q 044075 668 ---------------LTHSFKGHSTEIHSVCWDTNGEYLASVSQD------SVRVWSLASGECIHELSSSGNKFHSCIFH 726 (786)
Q Consensus 668 ---------------~i~~l~~h~~~I~sv~~spdg~~Lasgs~D------~I~vwDl~s~~~i~~l~~~~~~I~sv~fs 726 (786)
.++++.+|...|.+++.+|+++++++++.. .|++|+..+...+..+..|.-.|+.++|+
T Consensus 502 ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FS 581 (764)
T KOG1063|consen 502 EPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFS 581 (764)
T ss_pred CCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEEC
Confidence 012234788899999999999999998753 49999999999898999999999999999
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEE-----EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 727 PSYPTLMVIGGYQSLELWNMAENKCM-----TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 727 pdg~~L~sgs~dg~I~IwDl~~~~~~-----~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
||+++|++.+.|.++.+|...+.... ....|...|+++.|+|++.+++|+|.|.+|+||.
T Consensus 582 pdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~ 646 (764)
T KOG1063|consen 582 PDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWE 646 (764)
T ss_pred CCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEe
Confidence 99999999999999999987554332 3678999999999999999999999999999994
No 125
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.88 E-value=1.8e-21 Score=208.25 Aligned_cols=234 Identities=14% Similarity=0.269 Sum_probs=193.1
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec------------CCCCCCeEEEEEccCC-CEEEEEeCCCcEE
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP------------DDHNHIITDVRFRPNS-TQLATSSFDKTVR 576 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l------------~~h~~~V~sl~fspdg-~~Lasgs~Dg~I~ 576 (786)
..|.++.|++.|..|++.+.....+|+|-+........ ++|...++|.+|+|+. ..|++++.||++|
T Consensus 215 h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlR 294 (641)
T KOG0772|consen 215 HQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLR 294 (641)
T ss_pred cccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEE
Confidence 46999999999999988888899999997765544433 6899999999999954 5799999999999
Q ss_pred EEcCCCCcceeeeec-----CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee------EeecC--CeEEEEEe
Q 044075 577 IWDAAKPNFCLQTYT-----GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA------RISKG--GTVQVRFQ 643 (786)
Q Consensus 577 VWdl~s~~~~~~~~~-----~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~------~~~~~--~i~~i~~s 643 (786)
|||+.+.+.-...+. +..-+++.++|+++++. |++++.||.|.+|+....... ..+.. .|++|.|+
T Consensus 295 iWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~-iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS 373 (641)
T KOG0772|consen 295 IWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKL-IAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFS 373 (641)
T ss_pred EEecCCchhheeEEeeccCCCcccCceeeecCCCcch-hhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEec
Confidence 999988664343333 33457899999999986 668888999999998653321 22333 78999999
Q ss_pred CCCCEEEEEECCCeEEEEEcCCC-cEEEEEec--CCCCEEEEEEcCCCCEEEEEeC-------CeEEEEECCCCeeEEEE
Q 044075 644 PRLGLLLAAASENVVSIFDVETD-RLTHSFKG--HSTEIHSVCWDTNGEYLASVSQ-------DSVRVWSLASGECIHEL 713 (786)
Q Consensus 644 p~g~~Ll~gs~dg~I~iwD~~t~-~~i~~l~~--h~~~I~sv~~spdg~~Lasgs~-------D~I~vwDl~s~~~i~~l 713 (786)
++|++|++-+.|+.+++||++.. +++....+ ...+-+.+||+|+.++|++|+. .++.+||..+...+.++
T Consensus 374 ~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki 453 (641)
T KOG0772|consen 374 YDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKI 453 (641)
T ss_pred cccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEe
Confidence 99999999999999999999976 55555544 3345678999999999999863 16999999999999999
Q ss_pred ccCCCceEEEEEeCCCCEEEEEECCCeEEEE
Q 044075 714 SSSGNKFHSCIFHPSYPTLMVIGGYQSLELW 744 (786)
Q Consensus 714 ~~~~~~I~sv~fspdg~~L~sgs~dg~I~Iw 744 (786)
...+..|..|.|+|.-+.|++++.||.++||
T Consensus 454 ~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 454 DISTASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred cCCCceEEEEeecchhhheeeecCCCceEEE
Confidence 8889999999999999999999999999887
No 126
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=4.7e-23 Score=227.89 Aligned_cols=239 Identities=23% Similarity=0.423 Sum_probs=218.5
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
+...+.+..|...|.|+..-..++.+++|+.|..+-+|.+.....+..+.+|..+|.+|.|+++..+|++|+.+|+|++|
T Consensus 18 ~~~~~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~w 97 (825)
T KOG0267|consen 18 VWDTREFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVW 97 (825)
T ss_pred cccchhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeee
Confidence 34445667799999999997788999999999999999999888888899999999999999999999999999999999
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC---eEEEEEeCCCCEEEEEECC
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG---TVQVRFQPRLGLLLAAASE 655 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~---i~~i~~sp~g~~Ll~gs~d 655 (786)
|++..+ .++.+.+|...+.++.|+|-+.+. ++++.|+.+++||++...|...++++ +..++|+|+|++++.++.|
T Consensus 98 DleeAk-~vrtLtgh~~~~~sv~f~P~~~~~-a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed 175 (825)
T KOG0267|consen 98 DLEEAK-IVRTLTGHLLNITSVDFHPYGEFF-ASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGED 175 (825)
T ss_pred ehhhhh-hhhhhhccccCcceeeeccceEEe-ccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCc
Confidence 999876 588999999999999999998765 79999999999999988888877754 5667899999999999999
Q ss_pred CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEE
Q 044075 656 NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMV 734 (786)
Q Consensus 656 g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~s 734 (786)
..++|||...++....|..|...|..+.|+|..-+++.|+.| +|++||+++.+.+.........|.+..|+|++..+++
T Consensus 176 ~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~ 255 (825)
T KOG0267|consen 176 NTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLS 255 (825)
T ss_pred ceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeec
Confidence 999999999999999999999999999999999999999999 9999999999999888888899999999999998888
Q ss_pred EECCC
Q 044075 735 IGGYQ 739 (786)
Q Consensus 735 gs~dg 739 (786)
|....
T Consensus 256 G~q~s 260 (825)
T KOG0267|consen 256 GEQIS 260 (825)
T ss_pred Cchhh
Confidence 76553
No 127
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.88 E-value=8.5e-20 Score=205.17 Aligned_cols=288 Identities=15% Similarity=0.256 Sum_probs=226.7
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCE-EEEEeCCCcEE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQ-LATSSFDKTVR 576 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~-Lasgs~Dg~I~ 576 (786)
+-+.+.+++++.+.|++|.=+|-=..+|.|..+|+|.|++++..+.+.+++...+.|++++|..||+. +++|+..|.+.
T Consensus 191 t~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~ 270 (910)
T KOG1539|consen 191 TGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMA 270 (910)
T ss_pred cCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEE
Confidence 34678899999999999999998889999999999999999999999999876799999999999875 56666779999
Q ss_pred EEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee----eEe---ecCCeEEEEEe-CCC--
Q 044075 577 IWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC----ARI---SKGGTVQVRFQ-PRL-- 646 (786)
Q Consensus 577 VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~----~~~---~~~~i~~i~~s-p~g-- 646 (786)
+||++..+........|.+.|..+.|.|..+ ++++.+.|..+++|-.+++.- ++. +..+..+++|. ..+
T Consensus 271 ~wDLe~kkl~~v~~nah~~sv~~~~fl~~ep-Vl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ 349 (910)
T KOG1539|consen 271 FWDLEKKKLINVTRNAHYGSVTGATFLPGEP-VLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHF 349 (910)
T ss_pred EEEcCCCeeeeeeeccccCCcccceecCCCc-eEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEE
Confidence 9999988765566678999999999998655 556888899988886553211 111 01112222221 111
Q ss_pred ---------------------------------------------------------------CEEEEEECCCeEEEEEc
Q 044075 647 ---------------------------------------------------------------GLLLAAASENVVSIFDV 663 (786)
Q Consensus 647 ---------------------------------------------------------------~~Ll~gs~dg~I~iwD~ 663 (786)
+.+.+.-.+..++.|+.
T Consensus 350 ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~ 429 (910)
T KOG1539|consen 350 ILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNF 429 (910)
T ss_pred EEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEec
Confidence 22233333456777777
Q ss_pred CCCcE-EEEEe-----cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEE---ccCCCceEEEEEeCCCCEEE
Q 044075 664 ETDRL-THSFK-----GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHEL---SSSGNKFHSCIFHPSYPTLM 733 (786)
Q Consensus 664 ~t~~~-i~~l~-----~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l---~~~~~~I~sv~fspdg~~L~ 733 (786)
++... .+.+. .....+++||.++.|++.+.|+.. .|-+|++.+|-....+ ..|..+|+.++...-++.++
T Consensus 430 ~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~v 509 (910)
T KOG1539|consen 430 RNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLV 509 (910)
T ss_pred cCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEE
Confidence 66544 22332 123678999999999999999877 9999999999888888 47899999999999999999
Q ss_pred EEECCCeEEEEECCCCeEE------------------------------------------EEcccCCCeEEEEEcCCCC
Q 044075 734 VIGGYQSLELWNMAENKCM------------------------------------------TIAAHDCVISALAQSPVTG 771 (786)
Q Consensus 734 sgs~dg~I~IwDl~~~~~~------------------------------------------~~~~h~~~V~slafspdg~ 771 (786)
+++.+|.+.+||..+...+ .+.+|...|++++|||||+
T Consensus 510 sa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~Dgr 589 (910)
T KOG1539|consen 510 SAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGR 589 (910)
T ss_pred EccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCc
Confidence 9999999999998875410 2356999999999999999
Q ss_pred EEEEEeCCCcEEEeC
Q 044075 772 MVASASHDKSVKIWK 786 (786)
Q Consensus 772 ~LaSgs~DG~I~IWd 786 (786)
+|++++.|++|++||
T Consensus 590 WlisasmD~tIr~wD 604 (910)
T KOG1539|consen 590 WLISASMDSTIRTWD 604 (910)
T ss_pred EEEEeecCCcEEEEe
Confidence 999999999999998
No 128
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=2e-21 Score=206.59 Aligned_cols=228 Identities=18% Similarity=0.263 Sum_probs=197.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC-----
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK----- 582 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s----- 582 (786)
-.++|.|++-+|+|.+|+.|+..|.|++|.+.+|..+..+..|-..|+|+.|+.|+.+|++|+.||.|.+|++.+
T Consensus 80 ~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~ 159 (476)
T KOG0646|consen 80 LPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSAD 159 (476)
T ss_pred cccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccc
Confidence 467899999999999999999999999999999999999999999999999999999999999999999997632
Q ss_pred ---CcceeeeecCCCCCeEEEEEecCC-CeEEEEEcCCCcEEEEeCCCCeeeEe--ecCCeEEEEEeCCCCEEEEEECCC
Q 044075 583 ---PNFCLQTYTGHNNHVMSLDFHPKK-NDLFCSCDGNSEIRFWNLSQYSCARI--SKGGTVQVRFQPRLGLLLAAASEN 656 (786)
Q Consensus 583 ---~~~~~~~~~~h~~~V~sl~~sp~g-~~ll~sgs~Dg~I~iwDl~~~~~~~~--~~~~i~~i~~sp~g~~Ll~gs~dg 656 (786)
.......+..|.-+|+++...+-+ +..+++++.|.++++||+..+..+.. +...+.+++.+|-+..+++|+.+|
T Consensus 160 ~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G 239 (476)
T KOG0646|consen 160 NDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEG 239 (476)
T ss_pred cCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcc
Confidence 123577889999999999987653 34566999999999999999987765 447788999999999999999999
Q ss_pred eEEEEEcCCC----------------cEEEEEecCCC--CEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCC
Q 044075 657 VVSIFDVETD----------------RLTHSFKGHST--EIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSG 717 (786)
Q Consensus 657 ~I~iwD~~t~----------------~~i~~l~~h~~--~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~ 717 (786)
.|.+.++... ..+..+.+|.. .|+|++++-||.+|++|+.| .|+|||+.+..+++++....
T Consensus 240 ~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~k 319 (476)
T KOG0646|consen 240 KIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSK 319 (476)
T ss_pred eEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhc
Confidence 9999887543 23556678887 99999999999999999999 99999999999999998778
Q ss_pred CceEEEEEeCCCCEEEEE
Q 044075 718 NKFHSCIFHPSYPTLMVI 735 (786)
Q Consensus 718 ~~I~sv~fspdg~~L~sg 735 (786)
++|+.+.+.|-.+.++.+
T Consensus 320 gpVtnL~i~~~~~~~~l~ 337 (476)
T KOG0646|consen 320 GPVTNLQINPLERGIILF 337 (476)
T ss_pred cccceeEeeccccceecc
Confidence 999999987755444443
No 129
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.88 E-value=2.1e-21 Score=212.52 Aligned_cols=272 Identities=21% Similarity=0.353 Sum_probs=207.3
Q ss_pred EEEEcC---CCCEEEEEECCCeEEEEEcCCCee------eeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc
Q 044075 514 CCHFSS---DGKLLASAGHDKKVVVWNMENFQT------ECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN 584 (786)
Q Consensus 514 ~lafSp---dg~~Lasgs~Dg~V~IWdl~t~~~------~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~ 584 (786)
++.|++ ...+||.+.+||.|.++|...... ......|...|.++.|.|....|++++.|.++++||+...+
T Consensus 54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~ 133 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSR 133 (720)
T ss_pred cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccce
Confidence 356665 356799999999999999875332 24557899999999999977889999999999999999876
Q ss_pred ceee--eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee--------------------eEe-----e----
Q 044075 585 FCLQ--TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC--------------------ARI-----S---- 633 (786)
Q Consensus 585 ~~~~--~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~--------------------~~~-----~---- 633 (786)
+.. .+.+|.+.|.+++|.|.+..+||+|+.||.|.|||++.... ... .
T Consensus 134 -l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA 212 (720)
T KOG0321|consen 134 -LVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKA 212 (720)
T ss_pred -eecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccc
Confidence 343 48899999999999999999999999999999999863220 000 0
Q ss_pred -cCCeEE---EEEeCCCCEEEEEEC-CCeEEEEEcCCCcEEEEE--------ecC---CCCEEEEEEcCCCCEEEEEeCC
Q 044075 634 -KGGTVQ---VRFQPRLGLLLAAAS-ENVVSIFDVETDRLTHSF--------KGH---STEIHSVCWDTNGEYLASVSQD 697 (786)
Q Consensus 634 -~~~i~~---i~~sp~g~~Ll~gs~-dg~I~iwD~~t~~~i~~l--------~~h---~~~I~sv~~spdg~~Lasgs~D 697 (786)
...+.. +.+..|...|++++. |+.|+|||+++....... ..| ...+.+++.+..|.+|++.+.|
T Consensus 213 ~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD 292 (720)
T KOG0321|consen 213 ASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTD 292 (720)
T ss_pred ccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecC
Confidence 012333 556677788888887 999999999976433222 223 3357788888888887666667
Q ss_pred -eEEEEECCCCe--eEEEEccCCCc--eEEEEEeCCCCEEEEEECCCeEEEEECCCCe--EEEEcccCCCeEEEEEcCCC
Q 044075 698 -SVRVWSLASGE--CIHELSSSGNK--FHSCIFHPSYPTLMVIGGYQSLELWNMAENK--CMTIAAHDCVISALAQSPVT 770 (786)
Q Consensus 698 -~I~vwDl~s~~--~i~~l~~~~~~--I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~--~~~~~~h~~~V~slafspdg 770 (786)
.|++|++.+-. ++..+.++... ...-..+|++.++++|+.|...++|.+..-. ...+.+|.-.|++++|.|..
T Consensus 293 ~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~ 372 (720)
T KOG0321|consen 293 NSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSA 372 (720)
T ss_pred CcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeecccc
Confidence 99999998642 33344333221 2233578999999999999999999998754 34677999999999998843
Q ss_pred -CEEEEEeCCCcEEEeC
Q 044075 771 -GMVASASHDKSVKIWK 786 (786)
Q Consensus 771 -~~LaSgs~DG~I~IWd 786 (786)
.-+++|++|-.++||+
T Consensus 373 ~t~v~TcSdD~~~kiW~ 389 (720)
T KOG0321|consen 373 TTPVATCSDDFRVKIWR 389 (720)
T ss_pred CCCceeeccCcceEEEe
Confidence 3577889999999996
No 130
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.87 E-value=3.4e-21 Score=195.15 Aligned_cols=255 Identities=19% Similarity=0.347 Sum_probs=213.4
Q ss_pred EEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEE
Q 044075 523 LLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDF 602 (786)
Q Consensus 523 ~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~ 602 (786)
.|++.-.+++++ ...++.+.+|.+.|+.++-.....++.+++.|.+.+||.++++. |+..+.+|.+.|.+|.|
T Consensus 126 rivssFk~~t~~------~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~-CL~~Y~GH~GSVNsikf 198 (481)
T KOG0300|consen 126 RIVSSFKDGTVK------FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGA-CLATYTGHTGSVNSIKF 198 (481)
T ss_pred hheeeecCCcee------EeehhhhcccccceeeehhhcCCcceeecccccceeEEeecccc-ceeeecccccceeeEEe
Confidence 345555555533 34567889999999999998877899999999999999999987 79999999999999999
Q ss_pred ecCCCeEEEEEcCCCcEEEEeC------CC---------Ce---------------------e----eEe---ecCCeEE
Q 044075 603 HPKKNDLFCSCDGNSEIRFWNL------SQ---------YS---------------------C----ARI---SKGGTVQ 639 (786)
Q Consensus 603 sp~g~~ll~sgs~Dg~I~iwDl------~~---------~~---------------------~----~~~---~~~~i~~ 639 (786)
++.+. |+++++.|++..||.. .. .+ . +.. +.+.+.+
T Consensus 199 h~s~~-L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a 277 (481)
T KOG0300|consen 199 HNSGL-LLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSA 277 (481)
T ss_pred ccccc-eEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEe
Confidence 98755 6669999999999962 10 00 0 001 1133455
Q ss_pred EEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC-eeEEEEccCC
Q 044075 640 VRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG-ECIHELSSSG 717 (786)
Q Consensus 640 i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~-~~i~~l~~~~ 717 (786)
+.|-..+..+++++.|.+..+||+++++++..+.+|....+.++-+|..+++++.+.| ++++||++.. ..+..|.+|.
T Consensus 278 ~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHt 357 (481)
T KOG0300|consen 278 CDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHT 357 (481)
T ss_pred hhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccc
Confidence 6688889999999999999999999999999999999999999999999999999999 9999999854 5678899999
Q ss_pred CceEEEEEeCCCCEEEEEECCCeEEEEECCCCe-EEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 718 NKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK-CMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 718 ~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~-~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
..|+++.|..+.+ +++++.|.+|+|||+++.. .+......++++.++.+..+++|+.--++..|++||
T Consensus 358 dtVTS~vF~~dd~-vVSgSDDrTvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfD 426 (481)
T KOG0300|consen 358 DTVTSVVFNTDDR-VVSGSDDRTVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFD 426 (481)
T ss_pred cceeEEEEecCCc-eeecCCCceEEEeeeccccCcceeeecCCccceeEeecCCceEEeccCCceEEEEe
Confidence 9999999998765 8999999999999998754 345556778899999998888999888888999997
No 131
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=1.4e-20 Score=200.18 Aligned_cols=252 Identities=14% Similarity=0.227 Sum_probs=204.6
Q ss_pred CeEEEEEcCCCeeeeecCCC-CCCeEEEEEccCCCEEEEEeC-CCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCe
Q 044075 531 KKVVVWNMENFQTECTPDDH-NHIITDVRFRPNSTQLATSSF-DKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKND 608 (786)
Q Consensus 531 g~V~IWdl~t~~~~~~l~~h-~~~V~sl~fspdg~~Lasgs~-Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ 608 (786)
..+.+||+.++.....+++. ...-.++..- ++.+++++.. ...|.+|.+....... ...--.++|.++.-+|.|.+
T Consensus 18 ~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~-q~~v~Pg~v~al~s~n~G~~ 95 (476)
T KOG0646|consen 18 INCIVWDLRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVV-QYIVLPGPVHALASSNLGYF 95 (476)
T ss_pred cceeEEecCCCceeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhhhh-hhcccccceeeeecCCCceE
Confidence 45999999999998888765 2222222222 2356666654 4579999997655433 23334678999999999876
Q ss_pred EEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcC---------CCcEEEEEecCC
Q 044075 609 LFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVE---------TDRLTHSFKGHS 676 (786)
Q Consensus 609 ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~---------t~~~i~~l~~h~ 676 (786)
++ .+...|.|++|.+.++..+.++. -.++++.|+.|+.+|++|+.||.|.+|++. +-++++.|..|.
T Consensus 96 l~-ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~Ht 174 (476)
T KOG0646|consen 96 LL-AGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHT 174 (476)
T ss_pred EE-eecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCc
Confidence 66 66688999999999999877655 568999999999999999999999999864 236788899999
Q ss_pred CCEEEEEEcCC--CCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe---
Q 044075 677 TEIHSVCWDTN--GEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK--- 750 (786)
Q Consensus 677 ~~I~sv~~spd--g~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~--- 750 (786)
-+|+++...+. ..+|+++|.| ++++||+..+..+.++.. ...+.+|+.+|.+..+++|+.+|.|.+.++....
T Consensus 175 lsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~f-p~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~ 253 (476)
T KOG0646|consen 175 LSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITF-PSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQS 253 (476)
T ss_pred ceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEec-CCcceeEEEcccccEEEecCCcceEEeeehhcCCccc
Confidence 99999988765 4689999999 999999999999988854 5889999999999999999999999988775432
Q ss_pred --------------EEEEcccCC--CeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 751 --------------CMTIAAHDC--VISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 751 --------------~~~~~~h~~--~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
...+.+|.+ .|+|++++-||.+|++|+.||.|+|||
T Consensus 254 ~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWd 305 (476)
T KOG0646|consen 254 AGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWD 305 (476)
T ss_pred ccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEe
Confidence 125668887 999999999999999999999999997
No 132
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.87 E-value=3.8e-19 Score=190.17 Aligned_cols=273 Identities=15% Similarity=0.201 Sum_probs=212.3
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeee---cCCC-CCCeEEEEEccCCCEEEEEeCCCcEEEEcC
Q 044075 505 IRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECT---PDDH-NHIITDVRFRPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 505 l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~---l~~h-~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl 580 (786)
.+...+.|..+.|+|.+.-|++.+..+.+.+|+.+.+...++ ++.+ ...|.|++|.++|. +++|..+|.|.||+.
T Consensus 196 vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~ 274 (626)
T KOG2106|consen 196 VKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNILIWSK 274 (626)
T ss_pred ceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC-EEeecCCceEEEEeC
Confidence 344567899999999655555445578999999987655443 3333 36799999999986 889999999999999
Q ss_pred CCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe--e---------eEe-----------------
Q 044075 581 AKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS--C---------ARI----------------- 632 (786)
Q Consensus 581 ~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~--~---------~~~----------------- 632 (786)
.+........ .|.+.|.+++...+|. |+ +|+.|..|..||-.-.+ . ++.
T Consensus 275 ~~~~~~k~~~-aH~ggv~~L~~lr~Gt-ll-SGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~i 351 (626)
T KOG2106|consen 275 GTNRISKQVH-AHDGGVFSLCMLRDGT-LL-SGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFI 351 (626)
T ss_pred CCceEEeEee-ecCCceEEEEEecCcc-Ee-ecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceE
Confidence 8766444444 9999999999998775 44 79999999999832100 0 000
Q ss_pred ---------------ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC
Q 044075 633 ---------------SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD 697 (786)
Q Consensus 633 ---------------~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D 697 (786)
+......++.+|+...+++++.|+.+++|+ ..+++.+.. ...++.|+.|+|.| .++.|+..
T Consensus 352 L~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~-~~d~~~~~~fhpsg-~va~Gt~~ 427 (626)
T KOG2106|consen 352 LQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKI-IEDPAECADFHPSG-VVAVGTAT 427 (626)
T ss_pred EEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEE-ecCceeEeeccCcc-eEEEeecc
Confidence 001223456788889999999999999999 445555544 56788999999999 88888877
Q ss_pred -eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE--EE-cccCCCeEEEEEcCCCCEE
Q 044075 698 -SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM--TI-AAHDCVISALAQSPVTGMV 773 (786)
Q Consensus 698 -~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~--~~-~~h~~~V~slafspdg~~L 773 (786)
...|.|.++...+..-.. +.++..+.|+|+|.+|++|+.|+.|+||.+..+... .. ..|..+|+.|.|++|+++|
T Consensus 428 G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~ 506 (626)
T KOG2106|consen 428 GRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFL 506 (626)
T ss_pred ceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceE
Confidence 899999999666644444 899999999999999999999999999998765433 22 2345899999999999999
Q ss_pred EEEeCCCcEEEeC
Q 044075 774 ASASHDKSVKIWK 786 (786)
Q Consensus 774 aSgs~DG~I~IWd 786 (786)
.+-+-|-.|..|+
T Consensus 507 ~~~S~d~eiLyW~ 519 (626)
T KOG2106|consen 507 VSNSGDYEILYWK 519 (626)
T ss_pred EeccCceEEEEEc
Confidence 9999999999994
No 133
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=2.6e-20 Score=211.43 Aligned_cols=236 Identities=17% Similarity=0.248 Sum_probs=203.2
Q ss_pred CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC
Q 044075 548 DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY 627 (786)
Q Consensus 548 ~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~ 627 (786)
..|....+.|+|.|+|.+|++++.||.|++|+..+......++..+...|.+++... . .|++|+.+++|.+|.+..+
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s--~-~f~~~s~~~tv~~y~fps~ 86 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYS--N-HFLTGSEQNTVLRYKFPSG 86 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecc--c-ceEEeeccceEEEeeCCCC
Confidence 368888999999999999999999999999998776322333443777888888763 3 5669999999999999876
Q ss_pred e---eeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEE
Q 044075 628 S---CARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWS 703 (786)
Q Consensus 628 ~---~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwD 703 (786)
. .+..+.-++.+++|+.+|.++++|+.|-.|++.+..+......+.+|..+|.+|.|+|++.+||+.+.| .|+|||
T Consensus 87 ~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~ 166 (933)
T KOG1274|consen 87 EEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWD 166 (933)
T ss_pred CccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEE
Confidence 5 455667889999999999999999999999999999999999999999999999999999999999988 999999
Q ss_pred CCCCeeEEEEccC--------CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE---EEcccCCCeEEEEEcCCCCE
Q 044075 704 LASGECIHELSSS--------GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM---TIAAHDCVISALAQSPVTGM 772 (786)
Q Consensus 704 l~s~~~i~~l~~~--------~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~---~~~~h~~~V~slafspdg~~ 772 (786)
+.++.+.+++..- ...+..++|+|++..+++.+.|+.|.+|+..++... ....|...+.++.|+|.|.|
T Consensus 167 ~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~Y 246 (933)
T KOG1274|consen 167 LQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKY 246 (933)
T ss_pred cccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcE
Confidence 9998877666432 345677899999999999999999999999998765 33345556999999999999
Q ss_pred EEEEeCCCcEEEeC
Q 044075 773 VASASHDKSVKIWK 786 (786)
Q Consensus 773 LaSgs~DG~I~IWd 786 (786)
||+++.||.|.|||
T Consensus 247 iAAs~~~g~I~vWn 260 (933)
T KOG1274|consen 247 IAASTLDGQILVWN 260 (933)
T ss_pred EeeeccCCcEEEEe
Confidence 99999999999997
No 134
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=1.6e-19 Score=199.39 Aligned_cols=274 Identities=15% Similarity=0.222 Sum_probs=223.3
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC-eeeeecCCC-CCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC
Q 044075 505 IRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF-QTECTPDDH-NHIITDVRFRPNSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 505 l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~-~~~~~l~~h-~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s 582 (786)
+.--...|+|+||+.+.+.||.+-.||.|.||++... -....+.++ ...|.+++|++ +..|++.+.+|.|.-||+.+
T Consensus 21 ~d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~ 99 (691)
T KOG2048|consen 21 VDYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHT 99 (691)
T ss_pred EeeeccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEeccc
Confidence 3335678999999999999999999999999999863 334444444 46899999994 55788999999999999999
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe-----ecCCeEEEEEeCCCCEEEEEECCCe
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI-----SKGGTVQVRFQPRLGLLLAAASENV 657 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~-----~~~~i~~i~~sp~g~~Ll~gs~dg~ 657 (786)
.+ ....+....+.|++++.+|.+..+. .++.||.+++++...++.... .++.+.++.|++++..++.|+.||.
T Consensus 100 lk-~~~~~d~~gg~IWsiai~p~~~~l~-IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~ 177 (691)
T KOG2048|consen 100 LK-QKYNIDSNGGAIWSIAINPENTILA-IGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGV 177 (691)
T ss_pred Cc-eeEEecCCCcceeEEEeCCccceEE-eecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCce
Confidence 87 4666777789999999999887665 666789888888887665432 2378899999999999999999999
Q ss_pred EEEEEcCCCcEEEEEe-------c-CCCCEEEEEEcCCCCEEEEEe-CCeEEEEECCCCeeEEEEccCCCceEEEEEeCC
Q 044075 658 VSIFDVETDRLTHSFK-------G-HSTEIHSVCWDTNGEYLASVS-QDSVRVWSLASGECIHELSSSGNKFHSCIFHPS 728 (786)
Q Consensus 658 I~iwD~~t~~~i~~l~-------~-h~~~I~sv~~spdg~~Lasgs-~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspd 728 (786)
|++||+.++..++... . ...-|.+|.|-.++. |++|. .++|.+||...+..+..+..|...|.+++..++
T Consensus 178 Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~t-I~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~ 256 (691)
T KOG2048|consen 178 IRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDST-IASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADN 256 (691)
T ss_pred EEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCc-EEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCC
Confidence 9999999987666221 1 233467777776654 44454 449999999999999999999999999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCeE-----EEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 729 YPTLMVIGGYQSLELWNMAENKC-----MTIAAHDCVISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 729 g~~L~sgs~dg~I~IwDl~~~~~-----~~~~~h~~~V~slafspdg~~LaSgs~DG~I~I 784 (786)
+.+++++|-|+.|.-|...+++. .....|...|.+++..++ .|++|+.|+++.|
T Consensus 257 ~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i 315 (691)
T KOG2048|consen 257 EDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAI 315 (691)
T ss_pred CCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEE
Confidence 99999999999999998877643 144578889999999866 8999999998865
No 135
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.87 E-value=4e-20 Score=187.25 Aligned_cols=229 Identities=18% Similarity=0.268 Sum_probs=189.0
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCC--EEEEEeCCCcEEEEcC
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNST--QLATSSFDKTVRIWDA 580 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~--~Lasgs~Dg~I~VWdl 580 (786)
+....|.++|.|++|+.||..+++|+.|+.+++||+.++ .+..+..|..+|.++.|.+... .|+||+.|++|+.||.
T Consensus 66 ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~ 144 (347)
T KOG0647|consen 66 KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDT 144 (347)
T ss_pred hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceeeccc
Confidence 345569999999999999999999999999999999998 5567789999999999998665 8999999999999999
Q ss_pred CCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee-----EeecCCeEEEEEeCCCCEEEEEECC
Q 044075 581 AKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA-----RISKGGTVQVRFQPRLGLLLAAASE 655 (786)
Q Consensus 581 ~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~-----~~~~~~i~~i~~sp~g~~Ll~gs~d 655 (786)
+.... +..+. -.+.|.+++.- .-+++.+..+..|.+|+++..... ..++-.+.+++...+...++.|+.+
T Consensus 145 R~~~p-v~t~~-LPeRvYa~Dv~---~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiE 219 (347)
T KOG0647|consen 145 RSSNP-VATLQ-LPERVYAADVL---YPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIE 219 (347)
T ss_pred CCCCe-eeeee-ccceeeehhcc---CceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeec
Confidence 98663 33333 34567777764 336667778999999999764322 2344667889998888888999999
Q ss_pred CeEEEEEcCCC--cEEEEEecCCC---------CEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEE
Q 044075 656 NVVSIFDVETD--RLTHSFKGHST---------EIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSC 723 (786)
Q Consensus 656 g~I~iwD~~t~--~~i~~l~~h~~---------~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv 723 (786)
|.+.|..+..+ +.-..|+.|.. .|++|+|+|....|++++.| ++.+||-.....+++...+..+|+++
T Consensus 220 Grv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc 299 (347)
T KOG0647|consen 220 GRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCC 299 (347)
T ss_pred ceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCcccee
Confidence 99999998876 44556666652 47889999988888888888 99999999888888989999999999
Q ss_pred EEeCCCCEEEEEEC
Q 044075 724 IFHPSYPTLMVIGG 737 (786)
Q Consensus 724 ~fspdg~~L~sgs~ 737 (786)
.|+.+|.+++.+.+
T Consensus 300 ~fn~~G~ifaYA~g 313 (347)
T KOG0647|consen 300 SFNRNGSIFAYALG 313 (347)
T ss_pred EecCCCCEEEEEee
Confidence 99999998876654
No 136
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.85 E-value=4e-20 Score=202.52 Aligned_cols=281 Identities=17% Similarity=0.252 Sum_probs=207.7
Q ss_pred cCCCcceeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcC
Q 044075 460 LDDNVESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNME 539 (786)
Q Consensus 460 ld~~~~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~ 539 (786)
-..+.+.+++..+++|.+.+...+...-. ..-..++....|...|..+.|-|....|++++.|.++++||++
T Consensus 59 ~~~n~eHiLavadE~G~i~l~dt~~~~fr--------~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk 130 (720)
T KOG0321|consen 59 AAPNKEHILAVADEDGGIILFDTKSIVFR--------LEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVK 130 (720)
T ss_pred CCCCccceEEEecCCCceeeecchhhhcc--------hhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeec
Confidence 34567778888888888877764432110 0011234556799999999999977789999999999999999
Q ss_pred CCeeeee--cCCCCCCeEEEEEccC-CCEEEEEeCCCcEEEEcCCCCcc------e--------------------eeee
Q 044075 540 NFQTECT--PDDHNHIITDVRFRPN-STQLATSSFDKTVRIWDAAKPNF------C--------------------LQTY 590 (786)
Q Consensus 540 t~~~~~~--l~~h~~~V~sl~fspd-g~~Lasgs~Dg~I~VWdl~s~~~------~--------------------~~~~ 590 (786)
+.+++.. +.+|...|.++||.|. ...|++|+.||.|.|||++.... + ....
T Consensus 131 ~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~ 210 (720)
T KOG0321|consen 131 TSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKW 210 (720)
T ss_pred cceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccc
Confidence 9888877 8999999999999994 46789999999999999864330 0 0111
Q ss_pred cCCCCCeEE---EEEecCCCeEEEEEcC-CCcEEEEeCCCCeeeEee--------------cCCeEEEEEeCCCCEEEEE
Q 044075 591 TGHNNHVMS---LDFHPKKNDLFCSCDG-NSEIRFWNLSQYSCARIS--------------KGGTVQVRFQPRLGLLLAA 652 (786)
Q Consensus 591 ~~h~~~V~s---l~~sp~g~~ll~sgs~-Dg~I~iwDl~~~~~~~~~--------------~~~i~~i~~sp~g~~Ll~g 652 (786)
..+...|.+ +.+..|...|+ +++. |+.|+|||+++....... ..+++++.....|.+|++.
T Consensus 211 kA~s~ti~ssvTvv~fkDe~tla-Saga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~As 289 (720)
T KOG0321|consen 211 KAASNTIFSSVTVVLFKDESTLA-SAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFAS 289 (720)
T ss_pred ccccCceeeeeEEEEEeccceee-eccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEE
Confidence 234444554 44555555554 6665 999999999875432211 1356777888889999999
Q ss_pred ECCCeEEEEEcCCC--cEEEEEecCCCC--EEEEEEcCCCCEEEEEeCC-eEEEEECCCCe-eEEEEccCCCceEEEEEe
Q 044075 653 ASENVVSIFDVETD--RLTHSFKGHSTE--IHSVCWDTNGEYLASVSQD-SVRVWSLASGE-CIHELSSSGNKFHSCIFH 726 (786)
Q Consensus 653 s~dg~I~iwD~~t~--~~i~~l~~h~~~--I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~-~i~~l~~~~~~I~sv~fs 726 (786)
+.|+.|+.|++.+. .++..+.++... ...-+.+|++.+|++|+.| ..++|.+.+.+ ....+.+|...|++++|.
T Consensus 290 CtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~ 369 (720)
T KOG0321|consen 290 CTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWL 369 (720)
T ss_pred ecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeec
Confidence 99999999999875 345555544322 1223568999999999999 99999998764 455677899999999998
Q ss_pred CCC-CEEEEEECCCeEEEEECCCC
Q 044075 727 PSY-PTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 727 pdg-~~L~sgs~dg~I~IwDl~~~ 749 (786)
|.. .-+++++.|..++||++..+
T Consensus 370 pS~~t~v~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 370 PSATTPVATCSDDFRVKIWRLSNG 393 (720)
T ss_pred cccCCCceeeccCcceEEEeccCc
Confidence 853 34777799999999999764
No 137
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.85 E-value=9.1e-20 Score=193.40 Aligned_cols=289 Identities=18% Similarity=0.295 Sum_probs=215.9
Q ss_pred cceeeeeEEeecCCCCeEEEEEcCCC--CEEEEEECCCeEEEEEcC----CCeeeeecCCCCCCeEEEEEcc-CCCEEEE
Q 044075 496 AFSFNEVSSIRKSSSKVTCCHFSSDG--KLLASAGHDKKVVVWNME----NFQTECTPDDHNHIITDVRFRP-NSTQLAT 568 (786)
Q Consensus 496 ~~~~~~v~~l~~H~~~V~~lafSpdg--~~Lasgs~Dg~V~IWdl~----t~~~~~~l~~h~~~V~sl~fsp-dg~~Las 568 (786)
...+.+...++-|.+.|+|++|+|.. +++|+|..-|.|-+||+. ....+..+..|..+|.+|.|+| +...+++
T Consensus 173 l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~s 252 (498)
T KOG4328|consen 173 LDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYS 252 (498)
T ss_pred cccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheee
Confidence 34556677788899999999999954 588999999999999995 2344567789999999999999 5568999
Q ss_pred EeCCCcEEEEcCCCCcce-eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee----eEeecCCeEEEEEe
Q 044075 569 SSFDKTVRIWDAAKPNFC-LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC----ARISKGGTVQVRFQ 643 (786)
Q Consensus 569 gs~Dg~I~VWdl~s~~~~-~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~----~~~~~~~i~~i~~s 643 (786)
.++||+|++-|++..... +..+......+.++.|+.+...++ .++.=|...+||+++... ++.++..|..++++
T Consensus 253 sSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl-~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~N 331 (498)
T KOG4328|consen 253 SSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVL-FGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALN 331 (498)
T ss_pred eccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEE-EeecccceEEEEeecCCccchhhhhhhcccceeecC
Confidence 999999999999875421 112222345677888887777666 556566999999987543 45566789999999
Q ss_pred CCCC-EEEEEECCCeEEEEEcCCCc----EEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECC----CCeeEEEE
Q 044075 644 PRLG-LLLAAASENVVSIFDVETDR----LTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLA----SGECIHEL 713 (786)
Q Consensus 644 p~g~-~Ll~gs~dg~I~iwD~~t~~----~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~----s~~~i~~l 713 (786)
|... +|++++.|++++|||++... ++.....|...|.+++|+|.+-.|++.+.| .|+|||.. ...+..++
T Consensus 332 P~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I 411 (498)
T KOG4328|consen 332 PVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTI 411 (498)
T ss_pred CCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCcccee
Confidence 9775 47788889999999998642 223344599999999999987778888888 99999984 22333333
Q ss_pred ccC---CC--ceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcc-cCCCeEE-EEEcCCCC-EEEEEeCCCcEEE
Q 044075 714 SSS---GN--KFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAA-HDCVISA-LAQSPVTG-MVASASHDKSVKI 784 (786)
Q Consensus 714 ~~~---~~--~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~-h~~~V~s-lafspdg~-~LaSgs~DG~I~I 784 (786)
... .. ......|.|+..+|+++-.-..|-|||-..++.+ .+.. ....|.+ ..|+|-+. +++-++..|.|.|
T Consensus 412 ~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~v 491 (498)
T KOG4328|consen 412 PHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYV 491 (498)
T ss_pred eccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEE
Confidence 221 11 1335689999999999999999999999988855 3232 2224554 46999887 4444556788888
Q ss_pred e
Q 044075 785 W 785 (786)
Q Consensus 785 W 785 (786)
|
T Consensus 492 f 492 (498)
T KOG4328|consen 492 F 492 (498)
T ss_pred E
Confidence 8
No 138
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.85 E-value=2e-19 Score=198.74 Aligned_cols=355 Identities=18% Similarity=0.268 Sum_probs=255.4
Q ss_pred ccCCCCcceEEeecCCCCCCCCCCcccccccccccccccCCCcceeEeccCCCCceeeeccccCCCcccccccccceeee
Q 044075 422 HVSNVPKGLMMYGSDGTGGHASSTNQLDDMEHFGDIGSLDDNVESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNE 501 (786)
Q Consensus 422 ~~~~~~k~~~~~~~dg~g~l~~s~~~l~d~~~~~~v~sld~~~~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (786)
.+.+..++++++..+...|.+-...++..+.. . .--|....-......+..-.+....+.|.+.....|..
T Consensus 283 LSASaDksmiiW~pd~~tGiWv~~vRlGe~gg--~-------a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~ 353 (764)
T KOG1063|consen 283 LSASADKSMIIWKPDENTGIWVDVVRLGEVGG--S-------AGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQ 353 (764)
T ss_pred eecccCcceEEEecCCccceEEEEEEeecccc--c-------ccceeeEEEcCCCCEEEEecccCcEEEEeccCccceee
Confidence 35566788888888887777766665555441 1 11111111111112222223333344445445566778
Q ss_pred eEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcC----CCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 502 VSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNME----NFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~----t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
...+.||.+.|+.++|+|.|++|++.+.|-+-|||--- +...+....-|...++|++|-+....|++|.....+|+
T Consensus 354 ~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRv 433 (764)
T KOG1063|consen 354 EPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRV 433 (764)
T ss_pred ccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeecccceeeee
Confidence 88899999999999999999999999999999998644 23445566778889999999986678899998899999
Q ss_pred EcCCC-------------------------------------------Cc------------------------------
Q 044075 578 WDAAK-------------------------------------------PN------------------------------ 584 (786)
Q Consensus 578 Wdl~s-------------------------------------------~~------------------------------ 584 (786)
|+... +.
T Consensus 434 F~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~t 513 (764)
T KOG1063|consen 434 FEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNT 513 (764)
T ss_pred ecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhc
Confidence 96321 00
Q ss_pred --ceeeeecCCCCCeEEEEEecCCCeEEEEEcCC-----CcEEEEeCCCCeeeEe---ecCCeEEEEEeCCCCEEEEEEC
Q 044075 585 --FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN-----SEIRFWNLSQYSCARI---SKGGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 585 --~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D-----g~I~iwDl~~~~~~~~---~~~~i~~i~~sp~g~~Ll~gs~ 654 (786)
..+..+.+|...|++++.+|+++. +++++.. ..|++|+..+...... +.-.++.++|+|++++|++++.
T Consensus 514 LwPEv~KLYGHGyEv~~l~~s~~gnl-iASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsR 592 (764)
T KOG1063|consen 514 LWPEVHKLYGHGYEVYALAISPTGNL-IASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSR 592 (764)
T ss_pred cchhhHHhccCceeEEEEEecCCCCE-EeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeec
Confidence 001223479999999999999874 4566543 4699999987665543 4456889999999999999999
Q ss_pred CCeEEEEEcCCCc-E---EEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC--eeEEE--EccCCCceEEEEE
Q 044075 655 ENVVSIFDVETDR-L---THSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG--ECIHE--LSSSGNKFHSCIF 725 (786)
Q Consensus 655 dg~I~iwD~~t~~-~---i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~--~~i~~--l~~~~~~I~sv~f 725 (786)
|.++.+|...... . ....+.|..-|.++.|+|++.+|+++|.| +|+||..... +.+.. ...+...|+.+++
T Consensus 593 DRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~ 672 (764)
T KOG1063|consen 593 DRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAY 672 (764)
T ss_pred CceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEe
Confidence 9999999875441 1 22356799999999999999999999999 9999999877 55444 2345788999998
Q ss_pred eCC-----CCEEEEEECCCeEEEEECC------C-CeEE------EEcccCCCeEEEEEcCCC----------CEEEEEe
Q 044075 726 HPS-----YPTLMVIGGYQSLELWNMA------E-NKCM------TIAAHDCVISALAQSPVT----------GMVASAS 777 (786)
Q Consensus 726 spd-----g~~L~sgs~dg~I~IwDl~------~-~~~~------~~~~h~~~V~slafspdg----------~~LaSgs 777 (786)
.|- +..+++|-..|.|.+|... + +... ....|.+.|+.+.|.|.. ..|++|+
T Consensus 673 ~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~aV~rl~w~p~~~~~~~~~~~~l~la~~g 752 (764)
T KOG1063|consen 673 LPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPDSAVNRLLWRPTCSDDWVEDKEWLNLAVGG 752 (764)
T ss_pred eccccccccceEEEEecccEEEEEecccccccccceeeeeccccccccChHHhhheeEeccccccccccccceeEEeeec
Confidence 773 2266778888999999865 1 1111 234678899999999752 2579999
Q ss_pred CCCcEEEeC
Q 044075 778 HDKSVKIWK 786 (786)
Q Consensus 778 ~DG~I~IWd 786 (786)
+|..++|++
T Consensus 753 ~D~~vri~n 761 (764)
T KOG1063|consen 753 DDESVRIFN 761 (764)
T ss_pred ccceeEEee
Confidence 999999985
No 139
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.84 E-value=1.3e-20 Score=210.35 Aligned_cols=233 Identities=18% Similarity=0.334 Sum_probs=193.8
Q ss_pred CeEEEEEcC-CCCEEEEEECCCeEEEEEcCC---CeeeeecCCCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEcCCCCcc
Q 044075 511 KVTCCHFSS-DGKLLASAGHDKKVVVWNMEN---FQTECTPDDHNHIITDVRFRP-NSTQLATSSFDKTVRIWDAAKPNF 585 (786)
Q Consensus 511 ~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t---~~~~~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s~~~ 585 (786)
.+..+.|.. +.++|||++..|.|.+||+.. .+.+..|..|+..|++++|++ ...+|++|+.||+|++||++..+
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~- 167 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKK- 167 (839)
T ss_pred ehhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccc-
Confidence 355677775 677999999999999999987 566678899999999999998 45689999999999999999876
Q ss_pred eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe----eeEeecCCeEEEEEeCCCCEEEEEECCCeEEEE
Q 044075 586 CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS----CARISKGGTVQVRFQPRLGLLLAAASENVVSIF 661 (786)
Q Consensus 586 ~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~----~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iw 661 (786)
...++.+....|.++.|+|...+.|+++...|.+.+||++... .+..+.+.+.++.|+|++.+|++|+.|+.|+||
T Consensus 168 S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiW 247 (839)
T KOG0269|consen 168 SKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIW 247 (839)
T ss_pred ccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEE
Confidence 4667777889999999999999999999999999999999744 234567999999999999999999999999999
Q ss_pred EcCCCc--EEEEEecCCCCEEEEEEcCCCCE-EEEEe--CC-eEEEEECCCC-eeEEEEccCCCceEEEEEeC-CCCEEE
Q 044075 662 DVETDR--LTHSFKGHSTEIHSVCWDTNGEY-LASVS--QD-SVRVWSLASG-ECIHELSSSGNKFHSCIFHP-SYPTLM 733 (786)
Q Consensus 662 D~~t~~--~i~~l~~h~~~I~sv~~spdg~~-Lasgs--~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~fsp-dg~~L~ 733 (786)
|..+.+ ...++. ...+|.+|.|-|+..+ |++|+ .| .|+|||++.. -+..++..|...++.++|.. +...+.
T Consensus 248 d~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~ 326 (839)
T KOG0269|consen 248 DMTDSRAKPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLW 326 (839)
T ss_pred eccCCCccceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeE
Confidence 998763 344444 5678999999997654 56665 34 8999999865 56678889999999999976 345678
Q ss_pred EEECCCeEEEEE
Q 044075 734 VIGGYQSLELWN 745 (786)
Q Consensus 734 sgs~dg~I~IwD 745 (786)
+++.|+.|..-.
T Consensus 327 s~sKD~tv~qh~ 338 (839)
T KOG0269|consen 327 SCSKDGTVLQHL 338 (839)
T ss_pred eecCccHHHHhh
Confidence 888888765443
No 140
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=3e-19 Score=181.78 Aligned_cols=230 Identities=17% Similarity=0.294 Sum_probs=185.4
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee
Q 044075 550 HNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC 629 (786)
Q Consensus 550 h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~ 629 (786)
..+.|++|.|+|.+..|+++++||++++||+.... +.....|..++.+++|.++. -+++|+.||.|+.+|+.++..
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~--l~~~~~~~~plL~c~F~d~~--~~~~G~~dg~vr~~Dln~~~~ 87 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANS--LKLKFKHGAPLLDCAFADES--TIVTGGLDGQVRRYDLNTGNE 87 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchh--hhhheecCCceeeeeccCCc--eEEEeccCceEEEEEecCCcc
Confidence 36789999999999999999999999999998864 44445688999999999643 344899999999999998765
Q ss_pred eE--eecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC
Q 044075 630 AR--ISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS 706 (786)
Q Consensus 630 ~~--~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s 706 (786)
.. .+...+.++.+.+..+.+++|+.|+.|++||.+....+..+. ....|.++.. .++.|++|+.+ .|.+||+++
T Consensus 88 ~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v--~g~~LvVg~~~r~v~iyDLRn 164 (323)
T KOG1036|consen 88 DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDV--SGNRLVVGTSDRKVLIYDLRN 164 (323)
T ss_pred eeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccc-cCceEEEEec--cCCEEEEeecCceEEEEEccc
Confidence 44 456889999999999999999999999999999865655555 3447777764 57778888888 999999998
Q ss_pred CeeEEEEc--cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC-----eEEEEcccC---------CCeEEEEEcCCC
Q 044075 707 GECIHELS--SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN-----KCMTIAAHD---------CVISALAQSPVT 770 (786)
Q Consensus 707 ~~~i~~l~--~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~-----~~~~~~~h~---------~~V~slafspdg 770 (786)
........ .....+.++++.|++.-+++++-||.|.+=.++.. +...+..|. -+|++|+|+|-.
T Consensus 165 ~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~ 244 (323)
T KOG1036|consen 165 LDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIH 244 (323)
T ss_pred ccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEecccc
Confidence 75443322 23567899999999889999999998776544443 233455553 269999999999
Q ss_pred CEEEEEeCCCcEEEeC
Q 044075 771 GMVASASHDKSVKIWK 786 (786)
Q Consensus 771 ~~LaSgs~DG~I~IWd 786 (786)
..||||+.||.|.+||
T Consensus 245 ~tfaTgGsDG~V~~Wd 260 (323)
T KOG1036|consen 245 GTFATGGSDGIVNIWD 260 (323)
T ss_pred ceEEecCCCceEEEcc
Confidence 9999999999999997
No 141
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.84 E-value=2.6e-19 Score=182.58 Aligned_cols=266 Identities=19% Similarity=0.316 Sum_probs=206.6
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCC------------eeeeec-CCCCCCeEEEEEc-------cCCCEEEEEe
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENF------------QTECTP-DDHNHIITDVRFR-------PNSTQLATSS 570 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~------------~~~~~l-~~h~~~V~sl~fs-------pdg~~Lasgs 570 (786)
-...+.|+|||..|++-+.|..+.+|++... +....+ -.....|...+|- |+..++++.+
T Consensus 51 f~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ss 130 (406)
T KOG2919|consen 51 FLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSS 130 (406)
T ss_pred hhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeecc
Confidence 3567899999999999999999999998621 011111 1123468888886 5677899999
Q ss_pred CCCcEEEEcCCCCcceeeeecC--CCC---CeEEEEEecCCCeEEEEEcCCCcEEEEeC-CCCeeeE----------eec
Q 044075 571 FDKTVRIWDAAKPNFCLQTYTG--HNN---HVMSLDFHPKKNDLFCSCDGNSEIRFWNL-SQYSCAR----------ISK 634 (786)
Q Consensus 571 ~Dg~I~VWdl~s~~~~~~~~~~--h~~---~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl-~~~~~~~----------~~~ 634 (786)
.|.-|++||.-+++. ...+.+ |.. ...+++|+|||..|+ ++....|++||+ +.+.... ...
T Consensus 131 r~~PIh~wdaftG~l-raSy~~ydh~de~taAhsL~Fs~DGeqlf--aGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~ 207 (406)
T KOG2919|consen 131 RDQPIHLWDAFTGKL-RASYRAYDHQDEYTAAHSLQFSPDGEQLF--AGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQK 207 (406)
T ss_pred ccCceeeeecccccc-ccchhhhhhHHhhhhheeEEecCCCCeEe--ecccceEEEeeccCCCCCCcchhhhhccccccc
Confidence 999999999998873 333332 322 356899999999987 455889999999 4333211 113
Q ss_pred CCeEEEEEeCCCC-EEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCC-eeE
Q 044075 635 GGTVQVRFQPRLG-LLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASG-ECI 710 (786)
Q Consensus 635 ~~i~~i~~sp~g~-~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~-~~i 710 (786)
+.+.+++|+|... .+++++....+-||.-....++..+.+|.+.|+.++|.++|+.|++|+.. .|.+||++.. .++
T Consensus 208 giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv 287 (406)
T KOG2919|consen 208 GIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPV 287 (406)
T ss_pred ceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchh
Confidence 5567889999765 78899999999999999999999999999999999999999999999865 9999999964 556
Q ss_pred EEEccCCC-ceEE--EEEeCCCCEEEEEECCCeEEEEECCC-Ce-EEEEcccCCCeEEEEEcCCCCEEEEEeCC
Q 044075 711 HELSSSGN-KFHS--CIFHPSYPTLMVIGGYQSLELWNMAE-NK-CMTIAAHDCVISALAQSPVTGMVASASHD 779 (786)
Q Consensus 711 ~~l~~~~~-~I~s--v~fspdg~~L~sgs~dg~I~IwDl~~-~~-~~~~~~h~~~V~slafspdg~~LaSgs~D 779 (786)
..+..|.. .-.. +...|++++|++|+.||.|++||+.+ +. ...+..|...|+.++++|--.++++++..
T Consensus 288 ~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGq 361 (406)
T KOG2919|consen 288 YALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQ 361 (406)
T ss_pred hhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCc
Confidence 66665544 2233 44568899999999999999999988 55 44666899999999999998888887643
No 142
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.84 E-value=2.3e-19 Score=196.22 Aligned_cols=269 Identities=18% Similarity=0.295 Sum_probs=214.2
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeee
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTY 590 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~ 590 (786)
.|..++|-|||..|+.+. +..+.|||.+++....++++|.+.|+|++|+.||+.+++|+.|+.|.||+..-.. ...
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG---~Lk 89 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG---ILK 89 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccc---eee
Confidence 799999999999888774 5679999999999999999999999999999999999999999999999876543 222
Q ss_pred cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe-ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEE
Q 044075 591 TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI-SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLT 669 (786)
Q Consensus 591 ~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~-~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i 669 (786)
-.|...|.|+.|+|-...++ +|+- ...-+|........+. ....+.+++|..||.+|+.|-.+|+|.+-+....+.+
T Consensus 90 YSH~D~IQCMsFNP~~h~La-sCsL-sdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~ 167 (1081)
T KOG1538|consen 90 YSHNDAIQCMSFNPITHQLA-SCSL-SDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKV 167 (1081)
T ss_pred eccCCeeeEeecCchHHHhh-hcch-hhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcce
Confidence 35899999999999876554 7763 4567888776554332 3356788999999999999999999999865543333
Q ss_pred EEE--ecCCCCEEEEEEcCCC-----CEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeE
Q 044075 670 HSF--KGHSTEIHSVCWDTNG-----EYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSL 741 (786)
Q Consensus 670 ~~l--~~h~~~I~sv~~spdg-----~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I 741 (786)
..- .+..++|.+|+|+|.. ..+++...+ ++.+|.+. |+.+..-+.-+-...|+.+.++|.+++.|+.|+.+
T Consensus 168 ~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L 246 (1081)
T KOG1538|consen 168 KIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQL 246 (1081)
T ss_pred EEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccCCCCchhheeccCCcEEEEccCCCce
Confidence 322 2477899999999963 356666666 66666653 44454444445566789999999999999999999
Q ss_pred EEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 742 ELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 742 ~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.+|-.+.-..-++-..+..|+.++..|++.+++.|+.||+|-.|+
T Consensus 247 ~~fTR~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyN 291 (1081)
T KOG1538|consen 247 SLFTRDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYN 291 (1081)
T ss_pred EEEeecCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhh
Confidence 999765544446666788999999999999999999999997764
No 143
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.84 E-value=1.3e-19 Score=188.04 Aligned_cols=239 Identities=20% Similarity=0.408 Sum_probs=185.0
Q ss_pred ecCCCCeEEEEEcCCC--CEEEEEECCCeEEEEEcC----------------CCeeeeecCCCCCCeEEEEEcc-CCCEE
Q 044075 506 RKSSSKVTCCHFSSDG--KLLASAGHDKKVVVWNME----------------NFQTECTPDDHNHIITDVRFRP-NSTQL 566 (786)
Q Consensus 506 ~~H~~~V~~lafSpdg--~~Lasgs~Dg~V~IWdl~----------------t~~~~~~l~~h~~~V~sl~fsp-dg~~L 566 (786)
..|.+.|..+..++-+ .+.|+=+..|.|.||++. ..+++.++.+|...=+.|+|+| ....|
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~L 227 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRL 227 (440)
T ss_pred cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccccc
Confidence 3577778888877744 455666788999999975 3567788899999999999999 23358
Q ss_pred EEEeCCCcEEEEcCCCCccee--eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC---ee--eEeecCCeEE
Q 044075 567 ATSSFDKTVRIWDAAKPNFCL--QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY---SC--ARISKGGTVQ 639 (786)
Q Consensus 567 asgs~Dg~I~VWdl~s~~~~~--~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~---~~--~~~~~~~i~~ 639 (786)
++|..-+.|++|...++...+ ..+.+|+..|..++|+|..+.+|++|+.||+|+|||++.+ .+ .+.+.+.+..
T Consensus 228 lsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNV 307 (440)
T KOG0302|consen 228 LSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNV 307 (440)
T ss_pred ccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceee
Confidence 888888899999998876543 3567899999999999999999999999999999999986 23 2345578899
Q ss_pred EEEeCCCCEEEEEECCCeEEEEEcCCC---cEEEEEecCCCCEEEEEEcCC-CCEEEEEeCC-eEEEEECCCCee-----
Q 044075 640 VRFQPRLGLLLAAASENVVSIFDVETD---RLTHSFKGHSTEIHSVCWDTN-GEYLASVSQD-SVRVWSLASGEC----- 709 (786)
Q Consensus 640 i~~sp~g~~Ll~gs~dg~I~iwD~~t~---~~i~~l~~h~~~I~sv~~spd-g~~Lasgs~D-~I~vwDl~s~~~----- 709 (786)
|.|+.+..+|++|+.||+++|||++.. .++..|+-|..+|++|.|+|. ...|++++.| .|.|||+.-..-
T Consensus 308 ISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~ 387 (440)
T KOG0302|consen 308 ISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEID 387 (440)
T ss_pred EEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhc
Confidence 999999889999999999999999864 688999999999999999995 4566666667 999999863211
Q ss_pred ---EE--------EEccC--CCceEEEEEeCCCC-EEEEEECCCeEEEEE
Q 044075 710 ---IH--------ELSSS--GNKFHSCIFHPSYP-TLMVIGGYQSLELWN 745 (786)
Q Consensus 710 ---i~--------~l~~~--~~~I~sv~fspdg~-~L~sgs~dg~I~IwD 745 (786)
.. -+..| ...+..+.|++.-+ +|++.+.|| +.||.
T Consensus 388 ~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVfk 436 (440)
T KOG0302|consen 388 QEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVFK 436 (440)
T ss_pred cccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEEE
Confidence 00 11122 34566788888654 455555555 55553
No 144
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.83 E-value=5.7e-19 Score=179.68 Aligned_cols=238 Identities=17% Similarity=0.328 Sum_probs=184.0
Q ss_pred eecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc----eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEE
Q 044075 545 CTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF----CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIR 620 (786)
Q Consensus 545 ~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~----~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~ 620 (786)
..+++|.+.|++++|+.||++|++++.|++|+||++++... +++.-. .-+..+.+.|.||-..+++++-...+|+
T Consensus 80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nv-e~dhpT~V~FapDc~s~vv~~~~g~~l~ 158 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNV-EYDHPTRVVFAPDCKSVVVSVKRGNKLC 158 (420)
T ss_pred hhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccc-cCCCceEEEECCCcceEEEEEccCCEEE
Confidence 35689999999999999999999999999999999986432 111111 1235688999999999999999889999
Q ss_pred EEeCCCCee---------------eEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEc
Q 044075 621 FWNLSQYSC---------------ARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWD 685 (786)
Q Consensus 621 iwDl~~~~~---------------~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~s 685 (786)
+|.+...+. .+.+.-.+..+-....+.+|++++.|..|.+|+++ |+.+..+......-+..+.+
T Consensus 159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavS 237 (420)
T KOG2096|consen 159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVS 237 (420)
T ss_pred EEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeC
Confidence 998754221 11122344556667778899999999999999999 88888888777777888999
Q ss_pred CCCCEEEEEeCC-eEEEEECC---CC-----eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe------
Q 044075 686 TNGEYLASVSQD-SVRVWSLA---SG-----ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK------ 750 (786)
Q Consensus 686 pdg~~Lasgs~D-~I~vwDl~---s~-----~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~------ 750 (786)
|+|++|++++-- .|+||.+- .| ..+..+++|...|..++|+++...+++.+.||+++|||++-.-
T Consensus 238 P~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDp 317 (420)
T KOG2096|consen 238 PDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDP 317 (420)
T ss_pred CCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCc
Confidence 999999999988 89999874 22 3567889999999999999999999999999999999976321
Q ss_pred -EE-----EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 751 -CM-----TIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 751 -~~-----~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
.+ .+....+.-..|+.+|.|..|+.+. ...|++|
T Consensus 318 k~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~ 357 (420)
T KOG2096|consen 318 KILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVF 357 (420)
T ss_pred hHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEE
Confidence 11 1122233444899999999887653 3345554
No 145
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.83 E-value=2.4e-20 Score=216.62 Aligned_cols=242 Identities=19% Similarity=0.336 Sum_probs=202.5
Q ss_pred CCCeEEEEEcCCCCE----EEEEECCCeEEEEEcCC------CeeeeecCCCCCCeEEEEEccCC-CEEEEEeCCCcEEE
Q 044075 509 SSKVTCCHFSSDGKL----LASAGHDKKVVVWNMEN------FQTECTPDDHNHIITDVRFRPNS-TQLATSSFDKTVRI 577 (786)
Q Consensus 509 ~~~V~~lafSpdg~~----Lasgs~Dg~V~IWdl~t------~~~~~~l~~h~~~V~sl~fspdg-~~Lasgs~Dg~I~V 577 (786)
..+..+++|.+.|.. ||.|..||.|.+||... ...+.+...|++.|..+.|++.. +.||+|+.||.|.|
T Consensus 64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~i 143 (1049)
T KOG0307|consen 64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILI 143 (1049)
T ss_pred cccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEE
Confidence 346788999987665 88999999999999765 23456678899999999999965 49999999999999
Q ss_pred EcCCCCcceeee-ecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-----CCeEEEEEeCCCC-EEE
Q 044075 578 WDAAKPNFCLQT-YTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-----GGTVQVRFQPRLG-LLL 650 (786)
Q Consensus 578 Wdl~s~~~~~~~-~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-----~~i~~i~~sp~g~-~Ll 650 (786)
||+.+.+..... .....+.|.+++|+..-.++|++++.+|.+.|||++..+.+..+. ..+..+.|+|+.. .++
T Consensus 144 WDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~ 223 (1049)
T KOG0307|consen 144 WDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLL 223 (1049)
T ss_pred eccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeee
Confidence 999886643333 223457899999999889999999999999999999887655444 3356899999875 466
Q ss_pred EEECC---CeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCCC-CEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEE
Q 044075 651 AAASE---NVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTNG-EYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCI 724 (786)
Q Consensus 651 ~gs~d---g~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spdg-~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~ 724 (786)
+++.| -.|.+||+|.- .+++.+.+|...|.++.|++.+ ++|++++.| .|.+|+.++++.+.++....+.+..+.
T Consensus 224 ~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~ 303 (1049)
T KOG0307|consen 224 VASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQ 303 (1049)
T ss_pred eecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeee
Confidence 66654 36999999875 6778888999999999999966 889999999 999999999999999998889999999
Q ss_pred EeCCCC-EEEEEECCCeEEEEECCCCe
Q 044075 725 FHPSYP-TLMVIGGYQSLELWNMAENK 750 (786)
Q Consensus 725 fspdg~-~L~sgs~dg~I~IwDl~~~~ 750 (786)
|.|... .+++.+-||.|.||.+.+..
T Consensus 304 w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 304 WCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred ecCCCcchhhhheeccceeeeeeecCC
Confidence 999887 67778899999999987654
No 146
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.83 E-value=2.4e-19 Score=189.72 Aligned_cols=239 Identities=19% Similarity=0.376 Sum_probs=188.3
Q ss_pred eEEEEEcC-------CCCEEEEEECCCeEEEEEcCCC---ee------------------eeecCCCCCCeEEEEEccC-
Q 044075 512 VTCCHFSS-------DGKLLASAGHDKKVVVWNMENF---QT------------------ECTPDDHNHIITDVRFRPN- 562 (786)
Q Consensus 512 V~~lafSp-------dg~~Lasgs~Dg~V~IWdl~t~---~~------------------~~~l~~h~~~V~sl~fspd- 562 (786)
..|++|.. -|+++|.|+.|..|.|||+.=. .+ -..-.+|++.|.+++|+.+
T Consensus 176 PLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~ 255 (463)
T KOG0270|consen 176 PLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF 255 (463)
T ss_pred chhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc
Confidence 46777743 3679999999999999998611 01 1112479999999999874
Q ss_pred CCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC---CeeeEeecCCeEE
Q 044075 563 STQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ---YSCARISKGGTVQ 639 (786)
Q Consensus 563 g~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~---~~~~~~~~~~i~~ 639 (786)
.+.||+|+.|.+|++||+.+++ +..++..|...|.++.|+|....++++|+.|++|.+.|.+. ......+.+.+-.
T Consensus 256 ~nVLaSgsaD~TV~lWD~~~g~-p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEk 334 (463)
T KOG0270|consen 256 RNVLASGSADKTVKLWDVDTGK-PKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEK 334 (463)
T ss_pred ceeEEecCCCceEEEEEcCCCC-cceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEE
Confidence 4589999999999999999987 68888889999999999999999999999999999999994 2333456688999
Q ss_pred EEEeCCCC-EEEEEECCCeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCCC-CEEEEEeCC-eEEEEECCCCe--eEEEE
Q 044075 640 VRFQPRLG-LLLAAASENVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTNG-EYLASVSQD-SVRVWSLASGE--CIHEL 713 (786)
Q Consensus 640 i~~sp~g~-~Ll~gs~dg~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spdg-~~Lasgs~D-~I~vwDl~s~~--~i~~l 713 (786)
++|.+... .+++++.||+|+-+|+|.. +++.+++.|..+|.+|+++..- .++++++.+ .|++|++.... .+..-
T Consensus 335 v~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~ 414 (463)
T KOG0270|consen 335 VAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEH 414 (463)
T ss_pred EEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccc
Confidence 99988764 5777778999999999986 9999999999999999998854 567788888 99999987532 23222
Q ss_pred ccCCCceEEEEEeCCCCEEE-EEECCCeEEEEECCCCeE
Q 044075 714 SSSGNKFHSCIFHPSYPTLM-VIGGYQSLELWNMAENKC 751 (786)
Q Consensus 714 ~~~~~~I~sv~fspdg~~L~-sgs~dg~I~IwDl~~~~~ 751 (786)
...-+...|.++.|+-.+++ .|+..+.++|||+.+...
T Consensus 415 ~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~ 453 (463)
T KOG0270|consen 415 SFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSP 453 (463)
T ss_pred cccccceeecccCCCcceEEEecCccceEEEeecccChh
Confidence 22224467778888876554 455556799999987654
No 147
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.83 E-value=3.2e-20 Score=215.59 Aligned_cols=272 Identities=17% Similarity=0.287 Sum_probs=214.6
Q ss_pred EEEEEcCCCC-EEEEEE----------CCCeEEEEEcCCCe------eeeecCCCCCCeEEEEEccCCCE----EEEEeC
Q 044075 513 TCCHFSSDGK-LLASAG----------HDKKVVVWNMENFQ------TECTPDDHNHIITDVRFRPNSTQ----LATSSF 571 (786)
Q Consensus 513 ~~lafSpdg~-~Lasgs----------~Dg~V~IWdl~t~~------~~~~l~~h~~~V~sl~fspdg~~----Lasgs~ 571 (786)
-.++|+|++. ++|+|. .+.++-||.+.... .+..+ ......+.++|.+.+.. |+.|.+
T Consensus 10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~-~s~~rF~kL~W~~~g~~~~GlIaGG~e 88 (1049)
T KOG0307|consen 10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSL-QSSNRFNKLAWGSYGSHSHGLIAGGLE 88 (1049)
T ss_pred ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccc-cccccceeeeecccCCCccceeecccc
Confidence 4578999886 555542 35567777665322 22222 23456789999986654 888999
Q ss_pred CCcEEEEcCCCC-----cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe-----ecCCeEEEE
Q 044075 572 DKTVRIWDAAKP-----NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI-----SKGGTVQVR 641 (786)
Q Consensus 572 Dg~I~VWdl~s~-----~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~-----~~~~i~~i~ 641 (786)
||.|.+||...- ...+..+..|.+.|..++|++....++++|+.||.|.|||+.+.+.-.. ....|.+++
T Consensus 89 dG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~ls 168 (1049)
T KOG0307|consen 89 DGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLS 168 (1049)
T ss_pred CCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEec
Confidence 999999998652 2245667889999999999999999999999999999999987543322 336788999
Q ss_pred EeCCCCE-EEEEECCCeEEEEEcCCCcEEEEEecCCC--CEEEEEEcCCC-CEEEEEeCC----eEEEEECCCC-eeEEE
Q 044075 642 FQPRLGL-LLAAASENVVSIFDVETDRLTHSFKGHST--EIHSVCWDTNG-EYLASVSQD----SVRVWSLASG-ECIHE 712 (786)
Q Consensus 642 ~sp~g~~-Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~--~I~sv~~spdg-~~Lasgs~D----~I~vwDl~s~-~~i~~ 712 (786)
|+..-.+ |++++.+|.+.|||++..+.+..+..|.. .+..|.|+|++ ..|+++++| .|.+||++.. ..+++
T Consensus 169 WNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~ 248 (1049)
T KOG0307|consen 169 WNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKI 248 (1049)
T ss_pred cchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhh
Confidence 9876554 56666678999999999988877776544 47789999986 456666655 6999999864 57788
Q ss_pred EccCCCceEEEEEeCCC-CEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCC-EEEEEeCCCcEEEe
Q 044075 713 LSSSGNKFHSCIFHPSY-PTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTG-MVASASHDKSVKIW 785 (786)
Q Consensus 713 l~~~~~~I~sv~fspdg-~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~-~LaSgs~DG~I~IW 785 (786)
+.+|...|.++.|++.+ .++++++.|+.|.+|+.++++.+ .+......+..+.|+|... .+++++-||.|-||
T Consensus 249 ~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~ 324 (1049)
T KOG0307|consen 249 LEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIY 324 (1049)
T ss_pred hcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeee
Confidence 89999999999999977 88999999999999999999988 5556778899999999877 88889999999987
No 148
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.82 E-value=8.4e-19 Score=179.41 Aligned_cols=285 Identities=16% Similarity=0.341 Sum_probs=218.3
Q ss_pred eeeeeEEee-cCCCCeEEEEEcC-----CCCEEEEEECCCeEEEEEcCCCe---eeeec--CCCCCCeEEEEEccC----
Q 044075 498 SFNEVSSIR-KSSSKVTCCHFSS-----DGKLLASAGHDKKVVVWNMENFQ---TECTP--DDHNHIITDVRFRPN---- 562 (786)
Q Consensus 498 ~~~~v~~l~-~H~~~V~~lafSp-----dg~~Lasgs~Dg~V~IWdl~t~~---~~~~l--~~h~~~V~sl~fspd---- 562 (786)
.|+....++ .|+.+|..++|++ +...+|+.+ ...|.||+..... .+..+ ..|......++|+-+
T Consensus 26 ~yk~t~~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG-~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~ 104 (385)
T KOG1034|consen 26 SYKYTNHLKEDHNKPIFGVAFNSFLGCDEPQVFATVG-GNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTG 104 (385)
T ss_pred ceEeeeehhccCCCccceeeeehhcCCCCCceEEEeC-CcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCC
Confidence 455554444 6889999999985 234566665 4578888876432 22222 347778888999764
Q ss_pred CCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec------CC
Q 044075 563 STQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK------GG 636 (786)
Q Consensus 563 g~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~------~~ 636 (786)
..++|+++.-|.|+|.|+.+.. +...+.+|...|..|.++|....++++++.|..|++|++++..|+.++. +.
T Consensus 105 ~p~la~~G~~GvIrVid~~~~~-~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrde 183 (385)
T KOG1034|consen 105 NPFLAAGGYLGVIRVIDVVSGQ-CSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDE 183 (385)
T ss_pred CeeEEeecceeEEEEEecchhh-hccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCc
Confidence 3478999999999999999876 6888999999999999999999999999999999999999999998765 67
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEEEEcCCCcE------EE----------------------EEecCCCCEEEEEEcCCC
Q 044075 637 TVQVRFQPRLGLLLAAASENVVSIFDVETDRL------TH----------------------SFKGHSTEIHSVCWDTNG 688 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~------i~----------------------~l~~h~~~I~sv~~spdg 688 (786)
+.++.|+.++.+|++++.|..|.+|++...+. .. +-..|...|-|+.|- |
T Consensus 184 VLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--g 261 (385)
T KOG1034|consen 184 VLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--G 261 (385)
T ss_pred EEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--h
Confidence 89999999999999999999999999984311 10 111255666666664 5
Q ss_pred CEEEEEeCC-eEEEEEC-CCCe-------------eEEEEccCCCceEEE--EEeCCCCEEEEEECCCeEEEEECCCCeE
Q 044075 689 EYLASVSQD-SVRVWSL-ASGE-------------CIHELSSSGNKFHSC--IFHPSYPTLMVIGGYQSLELWNMAENKC 751 (786)
Q Consensus 689 ~~Lasgs~D-~I~vwDl-~s~~-------------~i~~l~~~~~~I~sv--~fspdg~~L~sgs~dg~I~IwDl~~~~~ 751 (786)
+++++-+-+ .|..|.. +-.+ .+.++.-....|+-+ +|.|-.+.|+.|...|.|++||++....
T Consensus 262 d~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep 341 (385)
T KOG1034|consen 262 DFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEP 341 (385)
T ss_pred hheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCC
Confidence 778887766 9999987 2111 233444444445544 5667788999999999999999987655
Q ss_pred E---EE--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 752 M---TI--AAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 752 ~---~~--~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
. ++ ......|...+|+.|+.+|+..++|++|.-||
T Consensus 342 ~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwd 381 (385)
T KOG1034|consen 342 PKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWD 381 (385)
T ss_pred ccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEE
Confidence 2 22 23356799999999999999999999999886
No 149
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.82 E-value=1.7e-18 Score=174.51 Aligned_cols=282 Identities=15% Similarity=0.290 Sum_probs=213.1
Q ss_pred CCcceeEeccCCCCceeeeccccCCCcc-cccccccceeeeeEEeecCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcC
Q 044075 462 DNVESFLSQDDGDGRDLFGTLKRNPSEQ-ATETSKAFSFNEVSSIRKSSSKVTCCHFSS-DGKLLASAGHDKKVVVWNME 539 (786)
Q Consensus 462 ~~~~~~l~~~d~dg~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~l~~H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~ 539 (786)
.....++.....||.+.++.++...... .....+..-.--...-.+|.-.|.++.|-| |.-.+.+++.|.+++|||.+
T Consensus 53 ~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtn 132 (397)
T KOG4283|consen 53 LTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTN 132 (397)
T ss_pred cccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccceEEEeecc
Confidence 3344667777778888888877553211 111111111111223346899999999999 77789999999999999999
Q ss_pred CCeeeeecCCCCCCeEEEEEccC---CCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC
Q 044075 540 NFQTECTPDDHNHIITDVRFRPN---STQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN 616 (786)
Q Consensus 540 t~~~~~~l~~h~~~V~sl~fspd---g~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D 616 (786)
+......|+ ..+.|++-+|+|- ..++|+|..|-.|++-|+.++. +.+++.+|...|.++.|+|..++++++++.|
T Consensus 133 TlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs-~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaD 210 (397)
T KOG4283|consen 133 TLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGS-FSHTLSGHRDGVLAVEWSPSSEWVLATGSAD 210 (397)
T ss_pred cceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCc-ceeeeccccCceEEEEeccCceeEEEecCCC
Confidence 988877774 4567899899982 4477888889999999999988 5889999999999999999999999999999
Q ss_pred CcEEEEeCCCC-eeeEe-----------------ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec---C
Q 044075 617 SEIRFWNLSQY-SCARI-----------------SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG---H 675 (786)
Q Consensus 617 g~I~iwDl~~~-~~~~~-----------------~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~---h 675 (786)
|.|++||++.. .|... +.+.+..++|..++.++++++.|..+++|+..+++....-.+ |
T Consensus 211 g~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~ 290 (397)
T KOG4283|consen 211 GAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIH 290 (397)
T ss_pred ceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCcccccccccccc
Confidence 99999999864 22222 225677899999999999999999999999998743221111 2
Q ss_pred CCCE---EEEEEcCCCCEEEEEeC-CeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 044075 676 STEI---HSVCWDTNGEYLASVSQ-DSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNM 746 (786)
Q Consensus 676 ~~~I---~sv~~spdg~~Lasgs~-D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl 746 (786)
...+ ..+. +-+...++.--. +.+.++.+-++..+..+..|...|.++++-|+-...+++..|+.|..|-.
T Consensus 291 n~~~~~~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 291 NQTTSFAVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred cccccceEEEe-ecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCchhhhhccccCCccccccc
Confidence 1111 1122 223333333333 48999999999999999999889999999999999999999999999976
No 150
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.82 E-value=4.7e-18 Score=187.91 Aligned_cols=233 Identities=21% Similarity=0.358 Sum_probs=197.6
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCC-CCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe
Q 044075 550 HNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHN-NHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS 628 (786)
Q Consensus 550 h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~-~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~ 628 (786)
....|++++|+.+.+.||++-.||.|.||++...-.+...+.++. ..|.+++|.+ +..|| +.+.+|.|..||+-+.+
T Consensus 24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLF-S~g~sg~i~EwDl~~lk 101 (691)
T KOG2048|consen 24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLF-SSGLSGSITEWDLHTLK 101 (691)
T ss_pred eccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEE-eecCCceEEEEecccCc
Confidence 346799999999999999999999999999999876666676654 6899999994 45566 88889999999999988
Q ss_pred eeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEE--EecCCCCEEEEEEcCCCCEEEEEeCC-eEEEE
Q 044075 629 CARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHS--FKGHSTEIHSVCWDTNGEYLASVSQD-SVRVW 702 (786)
Q Consensus 629 ~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~--l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vw 702 (786)
...... +.+.+++.+|.+..+++||.||.++.++...++..+. +...++.|.+++|++++..|++|+.| .|++|
T Consensus 102 ~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriw 181 (691)
T KOG2048|consen 102 QKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIW 181 (691)
T ss_pred eeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEE
Confidence 776654 7889999999999999999999999999988866553 33356899999999999999999999 79999
Q ss_pred ECCCCeeEEEEc-------c-CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEE
Q 044075 703 SLASGECIHELS-------S-SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMV 773 (786)
Q Consensus 703 Dl~s~~~i~~l~-------~-~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~L 773 (786)
|..++..++... . ....|+++.|-.++ .|++|...|.|.+||...+..+ ....|.+.|.+++..+++.++
T Consensus 182 d~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~v 260 (691)
T KOG2048|consen 182 DVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRV 260 (691)
T ss_pred EcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeE
Confidence 999987766221 1 23457888888555 5999999999999999999887 566899999999999999999
Q ss_pred EEEeCCCcEEEe
Q 044075 774 ASASHDKSVKIW 785 (786)
Q Consensus 774 aSgs~DG~I~IW 785 (786)
++++.|+.|.-|
T Consensus 261 fsaGvd~~ii~~ 272 (691)
T KOG2048|consen 261 FSAGVDPKIIQY 272 (691)
T ss_pred EEccCCCceEEE
Confidence 999999988654
No 151
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.82 E-value=7.3e-17 Score=176.19 Aligned_cols=281 Identities=27% Similarity=0.507 Sum_probs=225.7
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe-eeeecCCCC-CCeEEEEE-ccCCC-EEEEEeC-CCcEEEE
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ-TECTPDDHN-HIITDVRF-RPNST-QLATSSF-DKTVRIW 578 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~-~~~~l~~h~-~~V~sl~f-spdg~-~Lasgs~-Dg~I~VW 578 (786)
.+..|...|.++.|.+.+..++.++.|+.+.+|+..... ....+..+. ..+..+.+ .+++. +++..+. |+.+.+|
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 139 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW 139 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence 566799999999999999999999999999999999876 666666644 37777777 77777 5555445 9999999
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcC-CCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEE-E
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDG-NSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAA-A 653 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~-Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~g-s 653 (786)
++.........+..|...|.+++|+|++..++ +++. |+.+++|++.....+.... ..+.+++|+|++..++++ +
T Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 218 (466)
T COG2319 140 DLSTPGKLIRTLEGHSESVTSLAFSPDGKLLA-SGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGS 218 (466)
T ss_pred EecCCCeEEEEEecCcccEEEEEECCCCCEEE-ecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEec
Confidence 99873335778889999999999999988554 5664 9999999999866555544 578899999998844444 8
Q ss_pred CCCeEEEEEcCCCcEEE-EEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCee-EEEEccCCCceEEEEEeCCCC
Q 044075 654 SENVVSIFDVETDRLTH-SFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGEC-IHELSSSGNKFHSCIFHPSYP 730 (786)
Q Consensus 654 ~dg~I~iwD~~t~~~i~-~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~-i~~l~~~~~~I~sv~fspdg~ 730 (786)
.|+.|.+||...+..+. .+.+|...+ ...|++++.++++++.+ .+++||++.... +..+..|...+.++.|.|++.
T Consensus 219 ~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 297 (466)
T COG2319 219 SDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGK 297 (466)
T ss_pred CCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCC
Confidence 89999999999888877 688888775 44899999888888888 999999997664 545567788999999999888
Q ss_pred EEEEEECCCeEEEEECCCCeEEEE---cccCCCeEEEEEcCCCCEEEEE-eCCCcEEEeC
Q 044075 731 TLMVIGGYQSLELWNMAENKCMTI---AAHDCVISALAQSPVTGMVASA-SHDKSVKIWK 786 (786)
Q Consensus 731 ~L~sgs~dg~I~IwDl~~~~~~~~---~~h~~~V~slafspdg~~LaSg-s~DG~I~IWd 786 (786)
.+++++.|+.+.+||+........ ..|...|..+.|.+++..++.+ ..|+.+.+|+
T Consensus 298 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 357 (466)
T COG2319 298 LLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWD 357 (466)
T ss_pred EEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeee
Confidence 898899898899999988776533 3687789999994332455555 6888898885
No 152
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.82 E-value=1.6e-16 Score=173.48 Aligned_cols=283 Identities=28% Similarity=0.510 Sum_probs=228.2
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEEC-CCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCC-EEEEEeCCCcEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGH-DKKVVVWNMENFQTECTPDDHNHIITDVRFRPNST-QLATSSFDKTVR 576 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~-Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~-~Lasgs~Dg~I~ 576 (786)
+..+..+..|...|.+++|+|++.++++++. |+.+++|++.+...+..+..|...|.+++|+|++. .+++++.|+.|+
T Consensus 145 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~ 224 (466)
T COG2319 145 GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIR 224 (466)
T ss_pred CeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEE
Confidence 4677788899999999999999999998885 99999999999889999999999999999999988 555558999999
Q ss_pred EEcCCCCcceee-eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee-eEee---cCCeEEEEEeCCCCEEEE
Q 044075 577 IWDAAKPNFCLQ-TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC-ARIS---KGGTVQVRFQPRLGLLLA 651 (786)
Q Consensus 577 VWdl~s~~~~~~-~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~-~~~~---~~~i~~i~~sp~g~~Ll~ 651 (786)
+||...+. ... .+..|...+ ...|++++ .++++++.|+.+++|++..... .... ...+.++.|.|++..+++
T Consensus 225 ~wd~~~~~-~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 301 (466)
T COG2319 225 LWDLSTGK-LLRSTLSGHSDSV-VSSFSPDG-SLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLAS 301 (466)
T ss_pred EEECCCCc-EEeeecCCCCcce-eEeECCCC-CEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEE
Confidence 99888555 344 677887775 44899988 4555899999999999986554 3333 467788899998888888
Q ss_pred EECCCeEEEEEcCCCcEEEEEe--cCCCCEEEEEEcCCCCEEEEE-eCC-eEEEEECCCCeeEEEEccCCCceEEEEEeC
Q 044075 652 AASENVVSIFDVETDRLTHSFK--GHSTEIHSVCWDTNGEYLASV-SQD-SVRVWSLASGECIHELSSSGNKFHSCIFHP 727 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~l~--~h~~~I~sv~~spdg~~Lasg-s~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fsp 727 (786)
++.|+.+.+||..+........ .|...+..+.|.+++..++.+ ..| .+.+|++............ ..+..+.+.+
T Consensus 302 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 380 (466)
T COG2319 302 GSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGH-SNVLSVSFSP 380 (466)
T ss_pred eeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEecCC-ceEEEEEECC
Confidence 8889889999999887776665 788889999994332556555 566 8888999987733333322 2288888888
Q ss_pred CCCEEEE-EECCCeEEEEECCCCeEEEEcccC-CCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 728 SYPTLMV-IGGYQSLELWNMAENKCMTIAAHD-CVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 728 dg~~L~s-gs~dg~I~IwDl~~~~~~~~~~h~-~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
...++. +..++.+.+|+............. ..+..+.+++++..+++++.++.+++|+
T Consensus 381 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (466)
T COG2319 381 -DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWD 440 (466)
T ss_pred -CCCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEEe
Confidence 543444 578899999999998887666555 8899999999999999999999999995
No 153
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=1.3e-19 Score=196.75 Aligned_cols=252 Identities=21% Similarity=0.340 Sum_probs=201.2
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcC--------CCeeeeecCCCCCCeEEEEEccCCCEEEEEe
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNME--------NFQTECTPDDHNHIITDVRFRPNSTQLATSS 570 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~--------t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs 570 (786)
|....+++.|.+.|+.++|.+-...|++++.||+|++|++. ..+++.++.+|.++|.|++..+++..+++|+
T Consensus 284 w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg 363 (577)
T KOG0642|consen 284 WNIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGG 363 (577)
T ss_pred cceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeec
Confidence 55555899999999999999999999999999999999993 3567889999999999999999999999999
Q ss_pred CCCcEEEEcCCC---------CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-----CC
Q 044075 571 FDKTVRIWDAAK---------PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-----GG 636 (786)
Q Consensus 571 ~Dg~I~VWdl~s---------~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-----~~ 636 (786)
.||+|+.|++.. .......+.+|.+.|+.+++++....|+ +|+.||+++.|+...... ..+. +-
T Consensus 364 ~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Ll-scs~DgTvr~w~~~~~~~-~~f~~~~e~g~ 441 (577)
T KOG0642|consen 364 IDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLL-SCSSDGTVRLWEPTEESP-CTFGEPKEHGY 441 (577)
T ss_pred cCceeeeeccCCCCCcccccCcchhccceeccccceeeeeeccccccee-eecCCceEEeeccCCcCc-cccCCccccCC
Confidence 999999995531 1234557889999999999998877655 999999999999887665 2221 22
Q ss_pred eEEEEEeCCC-CEEEEEECCCeEEEEEcCCCcEEEEEec-------CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC
Q 044075 637 TVQVRFQPRL-GLLLAAASENVVSIFDVETDRLTHSFKG-------HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG 707 (786)
Q Consensus 637 i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t~~~i~~l~~-------h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~ 707 (786)
...+.+-... ...++...-+.-.+++.+....+..+.. ....+..|.++|...+.+++.+| .|+++|..++
T Consensus 442 Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~ 521 (577)
T KOG0642|consen 442 PLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTG 521 (577)
T ss_pred cceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceeccccccc
Confidence 3444443332 2233333334444455555444443332 12457788999999999999999 9999999999
Q ss_pred eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 708 ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 708 ~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
+.++....|...++++++.|+|.+|++++.|+.+++|.+....++
T Consensus 522 ~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~ 566 (577)
T KOG0642|consen 522 KILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCV 566 (577)
T ss_pred ccchheeeccceecceeecCCCceEEeecCCceeehhhccchhee
Confidence 999999999999999999999999999999999999999877765
No 154
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.81 E-value=1e-18 Score=186.33 Aligned_cols=257 Identities=17% Similarity=0.235 Sum_probs=200.0
Q ss_pred CeEEEEEcCCCCE-EEEEECCCeEEEEEcCCC--eeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 511 KVTCCHFSSDGKL-LASAGHDKKVVVWNMENF--QTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 511 ~V~~lafSpdg~~-Lasgs~Dg~V~IWdl~t~--~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
.|.+++|+....+ +++.+.|..|++|.-... +....-+.....-.||+......++++|+..++|+|||++. +.+.
T Consensus 36 g~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~-kl~h 114 (673)
T KOG4378|consen 36 GDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACASQSLYEISGGQSGCVKIWDLRA-KLIH 114 (673)
T ss_pred cceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhhhcceeeeccCcCceeeehhhHH-HHHh
Confidence 3899999986542 334456888999974422 22222122222345555555568999999999999999994 5578
Q ss_pred eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CC-eEEEEEeCCCCEEE-EEECCCeEEEEE
Q 044075 588 QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GG-TVQVRFQPRLGLLL-AAASENVVSIFD 662 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~-i~~i~~sp~g~~Ll-~gs~dg~I~iwD 662 (786)
+.+.+|...|+++.++-.+.+ +++++..|.|.|..+.++.....+. +. +.-+.|++..++++ +++.+|.|.+||
T Consensus 115 r~lkdh~stvt~v~YN~~Dey-iAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwD 193 (673)
T KOG4378|consen 115 RFLKDHQSTVTYVDYNNTDEY-IASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWD 193 (673)
T ss_pred hhccCCcceeEEEEecCCcce-eEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEe
Confidence 899999999999999976664 5589999999999998876655554 33 34678999877654 556679999999
Q ss_pred cCCCcEEEEEe-cCCCCEEEEEEcCCC-CEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCC
Q 044075 663 VETDRLTHSFK-GHSTEIHSVCWDTNG-EYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ 739 (786)
Q Consensus 663 ~~t~~~i~~l~-~h~~~I~sv~~spdg-~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg 739 (786)
+....++..+. .|..+...|||+|.. .+|++.+.| .|.+||++..+....+. ...+...++|.++|.+|++|...|
T Consensus 194 v~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G 272 (673)
T KOG4378|consen 194 VQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKG 272 (673)
T ss_pred ccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee-ecCCcceeeecCCceEEEeecCCc
Confidence 99887777654 599999999999955 577888999 99999999877766664 357899999999999999999999
Q ss_pred eEEEEECCCCe--EEEEcccCCCeEEEEEcCCC
Q 044075 740 SLELWNMAENK--CMTIAAHDCVISALAQSPVT 770 (786)
Q Consensus 740 ~I~IwDl~~~~--~~~~~~h~~~V~slafspdg 770 (786)
.|..||++..+ +..+..|...|++|+|-+.-
T Consensus 273 ~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 273 ELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred eEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence 99999999754 34677999999999998754
No 155
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=2.1e-18 Score=179.07 Aligned_cols=282 Identities=18% Similarity=0.280 Sum_probs=213.5
Q ss_pred eEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC------CeeeeecC-CCCCCeEEEEEccCCCEEEEEeCCCc
Q 044075 502 VSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN------FQTECTPD-DHNHIITDVRFRPNSTQLATSSFDKT 574 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t------~~~~~~l~-~h~~~V~sl~fspdg~~Lasgs~Dg~ 574 (786)
.+.+.+|.+.|.+|.||.++++||+|+.|..++||+++. .+++.... .|.+.|.|++|....++|++|..+++
T Consensus 49 qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~ 128 (609)
T KOG4227|consen 49 QKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGT 128 (609)
T ss_pred hhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcce
Confidence 456788999999999999999999999999999999873 34444443 45689999999999999999999999
Q ss_pred EEEEcCCCCcceeeeec--CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe----eeEe--ecCCeEEEEEeCCC
Q 044075 575 VRIWDAAKPNFCLQTYT--GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS----CARI--SKGGTVQVRFQPRL 646 (786)
Q Consensus 575 I~VWdl~s~~~~~~~~~--~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~----~~~~--~~~~i~~i~~sp~g 646 (786)
|.+.|+++... +..+. ...+.|+.+..+|..+ +|++.+.++.|.+||.+... .+.. .......+.|+|..
T Consensus 129 VI~HDiEt~qs-i~V~~~~~~~~~VY~m~~~P~DN-~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~ 206 (609)
T KOG4227|consen 129 VIKHDIETKQS-IYVANENNNRGDVYHMDQHPTDN-TLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPET 206 (609)
T ss_pred eEeeeccccee-eeeecccCcccceeecccCCCCc-eEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCC
Confidence 99999998763 33222 2235899999999955 55688889999999998643 2222 22455678899977
Q ss_pred C-EEEEEECCCeEEEEEcCCCc-EEEEEe---c---CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeE-EEEccC
Q 044075 647 G-LLLAAASENVVSIFDVETDR-LTHSFK---G---HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECI-HELSSS 716 (786)
Q Consensus 647 ~-~Ll~gs~dg~I~iwD~~t~~-~i~~l~---~---h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i-~~l~~~ 716 (786)
. .|++.+..+-+.+||++... .+.... + ....-.++.|+|+|..|.+.-.. .-.+||+.+..|. ..+...
T Consensus 207 P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N 286 (609)
T KOG4227|consen 207 PALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHN 286 (609)
T ss_pred ceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCC
Confidence 5 45566667889999998752 222211 1 12223578899999999888877 7778898875543 333211
Q ss_pred ------CCceEEEEEeCCCCEEEEEECCCeEEEEECCCC------------------------eEEEEcccCCCeEEEEE
Q 044075 717 ------GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN------------------------KCMTIAAHDCVISALAQ 766 (786)
Q Consensus 717 ------~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~------------------------~~~~~~~h~~~V~slaf 766 (786)
...+.+|+|..+.. +++|+.+-.|++|.+... ....+.+|.+.+..|.|
T Consensus 287 ~~GY~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF 365 (609)
T KOG4227|consen 287 PNGYCNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRF 365 (609)
T ss_pred CCcceeeeeeeeeeeeccee-eeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceee
Confidence 12366788877655 888998899999987531 12367899999999999
Q ss_pred cCCCCEEEEEeCCCcEEEeC
Q 044075 767 SPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 767 spdg~~LaSgs~DG~I~IWd 786 (786)
+|...+|++.+-.+.++||-
T Consensus 366 ~~H~~~l~SSGVE~~~KlWS 385 (609)
T KOG4227|consen 366 SQHNNLLVSSGVENSFKLWS 385 (609)
T ss_pred cCCcceEeccchhhheeccc
Confidence 99999999999999999993
No 156
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.81 E-value=1.1e-18 Score=190.03 Aligned_cols=241 Identities=19% Similarity=0.279 Sum_probs=198.8
Q ss_pred eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEE
Q 044075 543 TECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFW 622 (786)
Q Consensus 543 ~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iw 622 (786)
+-..+.+|++.|.+|...|.|.+|++|+.||+|+||.+.++. |+..+. ..+.|.||+|+|.+...+++...+..+.|.
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgR-cvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~iv 469 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGR-CVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIV 469 (733)
T ss_pred eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecce-EEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEe
Confidence 344668999999999999999999999999999999999987 555544 356899999999887655555444444444
Q ss_pred eCCCC---------------------------------------eeeE-eecCCeEEEEEeCCCCEEEEEECC---CeEE
Q 044075 623 NLSQY---------------------------------------SCAR-ISKGGTVQVRFQPRLGLLLAAASE---NVVS 659 (786)
Q Consensus 623 Dl~~~---------------------------------------~~~~-~~~~~i~~i~~sp~g~~Ll~gs~d---g~I~ 659 (786)
+..-+ -++. .+...+..+.|+..|.+|++...+ ..|.
T Consensus 470 np~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~Vl 549 (733)
T KOG0650|consen 470 NPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVL 549 (733)
T ss_pred CccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEE
Confidence 32111 0111 122567788999999999998875 4689
Q ss_pred EEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCC
Q 044075 660 IFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ 739 (786)
Q Consensus 660 iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg 739 (786)
|+++.......-|....+.|.++.|+|...+|++++...|+|||+...+.++.+......|.+++++|.|..|++++.|+
T Consensus 550 iHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~ 629 (733)
T KOG0650|consen 550 IHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDK 629 (733)
T ss_pred EEecccccccCchhhcCCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCC
Confidence 99998876666666667889999999999999999999999999999888888888888999999999999999999999
Q ss_pred eEEEEECCCC--eEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 740 SLELWNMAEN--KCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 740 ~I~IwDl~~~--~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
.+..||+.-. ...++..|...|++|+|++.-.++++|+.||+|.||
T Consensus 630 k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vf 677 (733)
T KOG0650|consen 630 KMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVF 677 (733)
T ss_pred eeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEE
Confidence 9999998765 344788899999999999999999999999999986
No 157
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.80 E-value=3.3e-18 Score=173.98 Aligned_cols=266 Identities=13% Similarity=0.310 Sum_probs=202.0
Q ss_pred eeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee
Q 044075 466 SFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC 545 (786)
Q Consensus 466 ~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~ 545 (786)
.+++..-.+|+.+++.+. +|..-+.+.+|..+|+|++||+||+.|+|++.|..|.+||+..+.+++
T Consensus 36 ~~lAvGc~nG~vvI~D~~--------------T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ 101 (405)
T KOG1273|consen 36 DYLAVGCANGRVVIYDFD--------------TFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLK 101 (405)
T ss_pred ceeeeeccCCcEEEEEcc--------------ccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCcee
Confidence 346666678888888765 344556788999999999999999999999999999999999999888
Q ss_pred ecCCCCCCeEEEEEccCC-CEEEEEeCCCcEEEEcCCCCcceeeeecC---CCCCeEEEEEecCCCeEEEEEcCCCcEEE
Q 044075 546 TPDDHNHIITDVRFRPNS-TQLATSSFDKTVRIWDAAKPNFCLQTYTG---HNNHVMSLDFHPKKNDLFCSCDGNSEIRF 621 (786)
Q Consensus 546 ~l~~h~~~V~sl~fspdg-~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~---h~~~V~sl~~sp~g~~ll~sgs~Dg~I~i 621 (786)
.+. ..++|+.+.|+|.. +.++++-.+..-.+-++..+...+..... ....-.+..|++.|++++ +|...|.+.+
T Consensus 102 rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIi-tGtsKGkllv 179 (405)
T KOG1273|consen 102 RIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYII-TGTSKGKLLV 179 (405)
T ss_pred EEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEE-EecCcceEEE
Confidence 874 56789999999943 44444444555556666543321111110 111223346788888766 8989999999
Q ss_pred EeCCCCeeeEeec----CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC-------c--EEEEEec--CCCCEEEEEEcC
Q 044075 622 WNLSQYSCARISK----GGTVQVRFQPRLGLLLAAASENVVSIFDVETD-------R--LTHSFKG--HSTEIHSVCWDT 686 (786)
Q Consensus 622 wDl~~~~~~~~~~----~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~-------~--~i~~l~~--h~~~I~sv~~sp 686 (786)
+|..+.+++..++ ..+..+.++-.|+.|+.-+.|..|+.|+++.- + +.+.+.. ....=.++||+.
T Consensus 180 ~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~ 259 (405)
T KOG1273|consen 180 YDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSG 259 (405)
T ss_pred EecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecC
Confidence 9999999887665 45677889999999999999999999998732 1 1111111 233446899999
Q ss_pred CCCEEEEEeCC--eEEEEECCCCeeEEEEccCC-CceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 687 NGEYLASVSQD--SVRVWSLASGECIHELSSSG-NKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 687 dg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~-~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
+|.|++.++.. .++||....|..++.+.+.. .....+.|+|-...+++. ..|.|+||....
T Consensus 260 dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~~ 323 (405)
T KOG1273|consen 260 DGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVVQ 323 (405)
T ss_pred CccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEeec
Confidence 99999999877 89999999999999998876 567889999998877777 778999997653
No 158
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.80 E-value=3.9e-18 Score=181.16 Aligned_cols=244 Identities=17% Similarity=0.307 Sum_probs=201.8
Q ss_pred eeEEeecCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEcCCCeeee--ecCCCC-CCeEEEEEccCCCEEEEEeCCCcEE
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGK-LLASAGHDKKVVVWNMENFQTEC--TPDDHN-HIITDVRFRPNSTQLATSSFDKTVR 576 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~-~Lasgs~Dg~V~IWdl~t~~~~~--~l~~h~-~~V~sl~fspdg~~Lasgs~Dg~I~ 576 (786)
.+..+.-...+|.+++|.|+|. .+++++....++.||+.+.+... .+.++. ..+.....++++++|+..+..|.|.
T Consensus 249 ~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~ 328 (514)
T KOG2055|consen 249 KLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIH 328 (514)
T ss_pred hheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEE
Confidence 4556666778999999999999 89999999999999999866543 333443 4577888899999999999999999
Q ss_pred EEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--CC--eEEEEEeCCCCEEEEE
Q 044075 577 IWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--GG--TVQVRFQPRLGLLLAA 652 (786)
Q Consensus 577 VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~~--i~~i~~sp~g~~Ll~g 652 (786)
|....+++. +..++ -.+.|..++|+.++..++ +++.+|.|.+||++...++..+. +. -+.+|.+.++.+|++|
T Consensus 329 lLhakT~el-i~s~K-ieG~v~~~~fsSdsk~l~-~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~G 405 (514)
T KOG2055|consen 329 LLHAKTKEL-ITSFK-IEGVVSDFTFSSDSKELL-ASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATG 405 (514)
T ss_pred eehhhhhhh-hheee-eccEEeeEEEecCCcEEE-EEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEec
Confidence 999988773 44444 457899999999998777 55558999999999999888776 33 3678889999999999
Q ss_pred ECCCeEEEEEcCC------CcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC---eEEEEECCCCeeEEEEccC---CCce
Q 044075 653 ASENVVSIFDVET------DRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD---SVRVWSLASGECIHELSSS---GNKF 720 (786)
Q Consensus 653 s~dg~I~iwD~~t------~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D---~I~vwDl~s~~~i~~l~~~---~~~I 720 (786)
+..|.|.|||.++ .+++..+..-...|+++.|+++..+|+.||.. .+++..+.+......+... -+.|
T Consensus 406 S~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~v 485 (514)
T KOG2055|consen 406 SDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHV 485 (514)
T ss_pred cCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccce
Confidence 9999999999654 36777777778889999999999999999865 7999999887766666544 3468
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 721 HSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 721 ~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
+|++|+|.+.++++|...|.|.+|.+.
T Consensus 486 tc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 486 TCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred EEEEecCCCceEEeecCCCceeeEeec
Confidence 999999999999999999999999874
No 159
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.80 E-value=1.9e-18 Score=183.46 Aligned_cols=251 Identities=16% Similarity=0.258 Sum_probs=197.1
Q ss_pred EEcCCCeeeeecCCCCCCeEEEEEccCC--CEEEEEeCCCcEEEEcCCC---CcceeeeecCCCCCeEEEEEecCCCeEE
Q 044075 536 WNMENFQTECTPDDHNHIITDVRFRPNS--TQLATSSFDKTVRIWDAAK---PNFCLQTYTGHNNHVMSLDFHPKKNDLF 610 (786)
Q Consensus 536 Wdl~t~~~~~~l~~h~~~V~sl~fspdg--~~Lasgs~Dg~I~VWdl~s---~~~~~~~~~~h~~~V~sl~~sp~g~~ll 610 (786)
+|+.+......+.-+...|++++|+|.. +++++|..-|.|-+||+.+ ...-+..+..|..+|.+|.|+|.....+
T Consensus 171 l~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i 250 (498)
T KOG4328|consen 171 LDLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQI 250 (498)
T ss_pred cccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhhe
Confidence 4444555556667788999999999954 5788899999999999952 2234667889999999999999988888
Q ss_pred EEEcCCCcEEEEeCCCCeeeEee-----cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcE-EEEEecCCCCEEEEEE
Q 044075 611 CSCDGNSEIRFWNLSQYSCARIS-----KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRL-THSFKGHSTEIHSVCW 684 (786)
Q Consensus 611 ~sgs~Dg~I~iwDl~~~~~~~~~-----~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~-i~~l~~h~~~I~sv~~ 684 (786)
++.+.||+|++-|++......+. ......+.|+.+...++.+..=|.+.+||+++... ...+.-|...|++|++
T Consensus 251 ~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~ 330 (498)
T KOG4328|consen 251 YSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVAL 330 (498)
T ss_pred eeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeec
Confidence 89999999999999875433222 23456677888888888888888999999998754 5566678899999999
Q ss_pred cCCC-CEEEEEeCC-eEEEEECCCC--e--eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECC----CCeEEEE
Q 044075 685 DTNG-EYLASVSQD-SVRVWSLASG--E--CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA----ENKCMTI 754 (786)
Q Consensus 685 spdg-~~Lasgs~D-~I~vwDl~s~--~--~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~----~~~~~~~ 754 (786)
+|-. .+|++++.| +++|||++.- + ++.....|...|.+..|+|.+..|++.+.|..|+|||.. .......
T Consensus 331 NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~ 410 (498)
T KOG4328|consen 331 NPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGT 410 (498)
T ss_pred CCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccce
Confidence 9954 578899999 9999999853 1 234445788999999999999889999999999999984 2222333
Q ss_pred cccCC------CeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 755 AAHDC------VISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 755 ~~h~~------~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
..|.. ...-..|.|+..+|++|-.-..|-|||
T Consensus 411 I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~ 448 (498)
T KOG4328|consen 411 IPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFD 448 (498)
T ss_pred eeccCcccccccchhheeCCCccEEEEeccCcceeEEc
Confidence 33322 234568999999999998888888875
No 160
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.78 E-value=2.4e-17 Score=179.75 Aligned_cols=131 Identities=26% Similarity=0.477 Sum_probs=108.1
Q ss_pred CCeEEEEEcCCC-cE----EEEEecCCCCEEEEEEcC-CCCEEEEEeCC-eEEEEECCCC-------eeEEEEccCCCce
Q 044075 655 ENVVSIFDVETD-RL----THSFKGHSTEIHSVCWDT-NGEYLASVSQD-SVRVWSLASG-------ECIHELSSSGNKF 720 (786)
Q Consensus 655 dg~I~iwD~~t~-~~----i~~l~~h~~~I~sv~~sp-dg~~Lasgs~D-~I~vwDl~s~-------~~i~~l~~~~~~I 720 (786)
.|.|.||+++.. ++ +-.+. ....|+.+.|+| |...|+++++| .|++|.+..+ +....+..|...|
T Consensus 602 gG~iai~el~~PGrLPDgv~p~l~-Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI 680 (1012)
T KOG1445|consen 602 GGVIAIYELNEPGRLPDGVMPGLF-NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKI 680 (1012)
T ss_pred CceEEEEEcCCCCCCCcccccccc-cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceE
Confidence 466777776543 11 11122 456799999999 77889999999 9999998753 3556788899999
Q ss_pred EEEEEeCC-CCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 721 HSCIFHPS-YPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 721 ~sv~fspd-g~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+++.|+|- ...|++++.|-+|++||+.+.+.. .+.+|.+.|.+++|||||+.+++.+.||+|+||+
T Consensus 681 ~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~ 748 (1012)
T KOG1445|consen 681 TSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYE 748 (1012)
T ss_pred EEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeC
Confidence 99999994 457889999999999999988765 7889999999999999999999999999999985
No 161
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.78 E-value=3.2e-17 Score=172.14 Aligned_cols=293 Identities=19% Similarity=0.264 Sum_probs=201.8
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcC-------
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNME------- 539 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~------- 539 (786)
+++....|....+|.+.+...... ....+-+..|..|...|++|.|+|+|++||+|+.+|.|.+|...
T Consensus 28 ~laT~G~D~~iriW~v~r~~~~~~-----~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~ 102 (434)
T KOG1009|consen 28 KLATAGGDKDIRIWKVNRSEPGGG-----DMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDA 102 (434)
T ss_pred ceecccCccceeeeeeeecCCCCC-----ceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccc
Confidence 566666666667766554432221 14566778899999999999999999999999999999999765
Q ss_pred -C--------CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEE
Q 044075 540 -N--------FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLF 610 (786)
Q Consensus 540 -t--------~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll 610 (786)
+ ....+.+.+|...|..++|+|++.++++++.|..+++||+..+. ....+.+|...|..++|.|-+.++.
T Consensus 103 d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~-l~~~~~dh~~yvqgvawDpl~qyv~ 181 (434)
T KOG1009|consen 103 DTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQ-LLAILDDHEHYVQGVAWDPLNQYVA 181 (434)
T ss_pred cchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccce-eEeeccccccccceeecchhhhhhh
Confidence 2 34556678899999999999999999999999999999999987 6888899999999999999877655
Q ss_pred EEEcCCCcEEEEeCCCCeeeEeecCCe-EEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCC
Q 044075 611 CSCDGNSEIRFWNLSQYSCARISKGGT-VQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGE 689 (786)
Q Consensus 611 ~sgs~Dg~I~iwDl~~~~~~~~~~~~i-~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~ 689 (786)
+-+.|...+.+++.....+......+ ..-.+.+.. ....++|.-++. ..-...++|+|+|.
T Consensus 182 -s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e--------~~s~rLfhDeTl---------ksFFrRlsfTPdG~ 243 (434)
T KOG1009|consen 182 -SKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNERE--------GKSTRLFHDETL---------KSFFRRLSFTPDGS 243 (434)
T ss_pred -hhccCcccceeeeeeeeeeeeeeeeEeeecccCCCC--------cceeeeeecCch---------hhhhhhcccCCCCc
Confidence 66667767777665544333222100 000111111 112222222221 12345678888888
Q ss_pred EEEEEeCC----------eEEEEECCC-CeeEEEEccCCCceEEEEEeC-----------------CCCEEEEEECCCeE
Q 044075 690 YLASVSQD----------SVRVWSLAS-GECIHELSSSGNKFHSCIFHP-----------------SYPTLMVIGGYQSL 741 (786)
Q Consensus 690 ~Lasgs~D----------~I~vwDl~s-~~~i~~l~~~~~~I~sv~fsp-----------------dg~~L~sgs~dg~I 741 (786)
+|++.+.- +.++|+-+. ..++..+.....+...+.|+| -.+.+++....+.|
T Consensus 244 llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~sv 323 (434)
T KOG1009|consen 244 LLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSV 323 (434)
T ss_pred EEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceE
Confidence 88765421 234554332 223344444444444444433 23456666677799
Q ss_pred EEEECCCCeEE--EEcccCCCeEEEEEcCCCCEEEEEeCCCcEE
Q 044075 742 ELWNMAENKCM--TIAAHDCVISALAQSPVTGMVASASHDKSVK 783 (786)
Q Consensus 742 ~IwDl~~~~~~--~~~~h~~~V~slafspdg~~LaSgs~DG~I~ 783 (786)
+|||..+-..+ ...-|-..|++++|++||..|+..+.||...
T Consensus 324 yvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS 367 (434)
T KOG1009|consen 324 YVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCS 367 (434)
T ss_pred EEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceE
Confidence 99999986665 3446889999999999999999999999654
No 162
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.78 E-value=3e-18 Score=170.80 Aligned_cols=281 Identities=21% Similarity=0.229 Sum_probs=201.3
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC-CCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD-DHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~-~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
.++..+++|.+.|+|+.|-.+++ |.+|..-|.|++|++.+......+. .|...|+.+.-.|+ ..|.+-+.|+.+.+|
T Consensus 5 dP~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw 82 (323)
T KOG0322|consen 5 DPFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILW 82 (323)
T ss_pred CCeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEE
Confidence 45667889999999999998775 8899999999999999988888887 67789999999987 468889999999999
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecC-----CC---eEEEEEcCC-CcEEEEeCCCCeeeEeec-------CCeEEEEE
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPK-----KN---DLFCSCDGN-SEIRFWNLSQYSCARISK-------GGTVQVRF 642 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~-----g~---~ll~sgs~D-g~I~iwDl~~~~~~~~~~-------~~i~~i~~ 642 (786)
++.-.... ..|.-.+.++-|.+. .+ .+++.-+.. ..+.+-|......+.+.. +.+.+..+
T Consensus 83 ~ia~s~~i----~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~ 158 (323)
T KOG0322|consen 83 TIAYSAFI----SIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDK 158 (323)
T ss_pred EccCcceE----EEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeec
Confidence 99764421 223333444544431 11 111111100 011222222222222211 33444443
Q ss_pred eC-CCC--EEEEEECCCeEEEEEcCCCcEE----------EEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC-
Q 044075 643 QP-RLG--LLLAAASENVVSIFDVETDRLT----------HSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG- 707 (786)
Q Consensus 643 sp-~g~--~Ll~gs~dg~I~iwD~~t~~~i----------~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~- 707 (786)
.. ++. .+++|.++|.|.+||+.++..+ .....|..+|.++.|.+.-..=++|+.+ .+..|.+...
T Consensus 159 ~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~ 238 (323)
T KOG0322|consen 159 DHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHST 238 (323)
T ss_pred cccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeecccc
Confidence 22 222 4667777899999999997433 3334589999999998765555666766 8888887642
Q ss_pred -e--eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEE
Q 044075 708 -E--CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVK 783 (786)
Q Consensus 708 -~--~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~ 783 (786)
. ...++....-.|..+.+-||++.+++++.|+.|+||+.++...+ .+..|.+.|.+++|+|+.+++|+++.|+.|-
T Consensus 239 gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rIS 318 (323)
T KOG0322|consen 239 GSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARIS 318 (323)
T ss_pred CcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEE
Confidence 2 22333344566888999999999999999999999999998777 6678999999999999999999999999999
Q ss_pred EeC
Q 044075 784 IWK 786 (786)
Q Consensus 784 IWd 786 (786)
+|+
T Consensus 319 LWk 321 (323)
T KOG0322|consen 319 LWK 321 (323)
T ss_pred eee
Confidence 996
No 163
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.78 E-value=3.1e-17 Score=173.92 Aligned_cols=231 Identities=15% Similarity=0.331 Sum_probs=180.6
Q ss_pred EEEEEcc-------CCCEEEEEeCCCcEEEEcCCCCcc--eee------------------eecCCCCCeEEEEEecCCC
Q 044075 555 TDVRFRP-------NSTQLATSSFDKTVRIWDAAKPNF--CLQ------------------TYTGHNNHVMSLDFHPKKN 607 (786)
Q Consensus 555 ~sl~fsp-------dg~~Lasgs~Dg~I~VWdl~s~~~--~~~------------------~~~~h~~~V~sl~~sp~g~ 607 (786)
.|+.|.. .|+++|.|+.|..|.|||+.--.. +.. .-.+|+..|.++.|+..-+
T Consensus 177 LC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~ 256 (463)
T KOG0270|consen 177 LCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFR 256 (463)
T ss_pred hhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccc
Confidence 5667743 367999999999999999863221 111 1236888999999999999
Q ss_pred eEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCC-CEEEEEECCCeEEEEEcCCCcEE-EEEecCCCCEEEE
Q 044075 608 DLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRL-GLLLAAASENVVSIFDVETDRLT-HSFKGHSTEIHSV 682 (786)
Q Consensus 608 ~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t~~~i-~~l~~h~~~I~sv 682 (786)
.++++|+.|.+|++||+.++++...+. +.+.++.|+|.. ..|++|+.|++|.++|.+..... ..++ ..+.|-.+
T Consensus 257 nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk-~~g~VEkv 335 (463)
T KOG0270|consen 257 NVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK-FDGEVEKV 335 (463)
T ss_pred eeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE-eccceEEE
Confidence 999999999999999999999877655 778999999865 57889999999999999953222 2222 56789999
Q ss_pred EEcCCCCE-EEEEeCC-eEEEEECCCC-eeEEEEccCCCceEEEEEeCCCC-EEEEEECCCeEEEEECCCCeEEEEcccC
Q 044075 683 CWDTNGEY-LASVSQD-SVRVWSLASG-ECIHELSSSGNKFHSCIFHPSYP-TLMVIGGYQSLELWNMAENKCMTIAAHD 758 (786)
Q Consensus 683 ~~spdg~~-Lasgs~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~fspdg~-~L~sgs~dg~I~IwDl~~~~~~~~~~h~ 758 (786)
+|.+.... ++++.+| +|+-+|+|.. +++.++..|..+|.++++++.-+ ++++++.|+.|.+|++..........|.
T Consensus 336 ~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~ 415 (463)
T KOG0270|consen 336 AWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHS 415 (463)
T ss_pred EecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccccccc
Confidence 99997654 4555566 9999999975 99999999999999999998654 5777889999999999876554333333
Q ss_pred ---CCeEEEEEcCCCC-EEEEEeCCCcEEEeC
Q 044075 759 ---CVISALAQSPVTG-MVASASHDKSVKIWK 786 (786)
Q Consensus 759 ---~~V~slafspdg~-~LaSgs~DG~I~IWd 786 (786)
+...|.++.|+-. +++.|+..+.++|||
T Consensus 416 ~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd 447 (463)
T KOG0270|consen 416 FKLGRLHCFALDPDVAFTLAFGGEKAVLRVWD 447 (463)
T ss_pred ccccceeecccCCCcceEEEecCccceEEEee
Confidence 2356677777655 677788888999997
No 164
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.78 E-value=8.5e-18 Score=173.08 Aligned_cols=264 Identities=16% Similarity=0.278 Sum_probs=192.2
Q ss_pred CEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEcc--CCCEEEEEeCCCcEEEEcCCCCcce-eeeecCCC-CCe
Q 044075 522 KLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRP--NSTQLATSSFDKTVRIWDAAKPNFC-LQTYTGHN-NHV 597 (786)
Q Consensus 522 ~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fsp--dg~~Lasgs~Dg~I~VWdl~s~~~~-~~~~~~h~-~~V 597 (786)
..+|++...|.|+|||..+++.+..++++...+..++|.. ....+.+|+.||+|++||++..... ...+..+. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 5688899999999999999999999999999999999987 4567999999999999999986543 33445555 456
Q ss_pred EEEEEecCCCeEEEEEc----CCCcEEEEeCCCCee-e----EeecCCeEEEEEeCCC-CEEEEEECCCeEEEEEcCCCc
Q 044075 598 MSLDFHPKKNDLFCSCD----GNSEIRFWNLSQYSC-A----RISKGGTVQVRFQPRL-GLLLAAASENVVSIFDVETDR 667 (786)
Q Consensus 598 ~sl~~sp~g~~ll~sgs----~Dg~I~iwDl~~~~~-~----~~~~~~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t~~ 667 (786)
.|++..-. ..++++|. .+-.|.+||++.... + ..+...|++++|+|.. +.|++|+.||.|.+||++...
T Consensus 121 ~~ld~nck-~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~ 199 (376)
T KOG1188|consen 121 ICLDLNCK-KNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDN 199 (376)
T ss_pred eEeeccCc-CCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCc
Confidence 66666533 44665553 467899999998665 3 3455889999999965 678999999999999998652
Q ss_pred ---EEEEEecCCCCEEEEEEcCCC-CEEEEEeCC-eEEEEECCCCeeEEEEccCC------------CceEEEEEeCCCC
Q 044075 668 ---LTHSFKGHSTEIHSVCWDTNG-EYLASVSQD-SVRVWSLASGECIHELSSSG------------NKFHSCIFHPSYP 730 (786)
Q Consensus 668 ---~i~~l~~h~~~I~sv~~spdg-~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~------------~~I~sv~fspdg~ 730 (786)
.+.....|...|.++.|..++ +.|.+-+.. +..+|+++.+.+...+.... ..+..+....+..
T Consensus 200 EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~ 279 (376)
T KOG1188|consen 200 EEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKD 279 (376)
T ss_pred chhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcc
Confidence 222233488889999999887 345555555 99999999887655543321 1122222223344
Q ss_pred EEEEEEC-CCeEEEEECC---CCeEE----EEc-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 731 TLMVIGG-YQSLELWNMA---ENKCM----TIA-AHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 731 ~L~sgs~-dg~I~IwDl~---~~~~~----~~~-~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.++.++. .+...++-+. .+... .+. +|...|.++.|...+.+++||++||.|.+|+
T Consensus 280 ~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk 344 (376)
T KOG1188|consen 280 TCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWK 344 (376)
T ss_pred eEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEe
Confidence 5555554 5555555443 22222 333 4778899999998899999999999999995
No 165
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.77 E-value=5.4e-19 Score=197.99 Aligned_cols=274 Identities=19% Similarity=0.310 Sum_probs=219.5
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
.+.++.|.+|...|.|+.|...|.++++|+.|..|+||..++..+...+.+|.+.|+.++.+.+..++++++.|..|++|
T Consensus 180 mk~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvW 259 (1113)
T KOG0644|consen 180 MKNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVW 259 (1113)
T ss_pred HHHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEE
Confidence 35677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe-------ecCCeEEEEEeCCCCEEEE
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI-------SKGGTVQVRFQPRLGLLLA 651 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~-------~~~~i~~i~~sp~g~~Ll~ 651 (786)
.+.++. ++..+.+|++.|++|+|+|-. +.+.||++++||.+-.-.+.. .+..+..+.|...+..+++
T Consensus 260 rl~~~~-pvsvLrghtgavtaiafsP~~-----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~T 333 (1113)
T KOG0644|consen 260 RLPDGA-PVSVLRGHTGAVTAIAFSPRA-----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLT 333 (1113)
T ss_pred ecCCCc-hHHHHhccccceeeeccCccc-----cCCCCCceEeccccccccccCCCCCCcccccceeeeecccccccccc
Confidence 999876 688899999999999999854 678899999999882111111 1134456677778888999
Q ss_pred EECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCC-CEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCC
Q 044075 652 AASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNG-EYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSY 729 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg-~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg 729 (786)
++.|+.-..|.+.... .+...+.-+.++.+- .+.++.-.+ .+++|++.+|..++.+.+|...+..+.+||-.
T Consensus 334 gs~d~ea~n~e~~~l~------~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn 407 (1113)
T KOG0644|consen 334 GSRDGEARNHEFEQLA------WRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFN 407 (1113)
T ss_pred ccCCcccccchhhHhh------hhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCC
Confidence 9999888877665321 122222222222222 345555566 89999999999999999999999999999977
Q ss_pred CE-EEEEECCCeEEEEECCCCeEEE--EcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 730 PT-LMVIGGYQSLELWNMAENKCMT--IAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 730 ~~-L~sgs~dg~I~IwDl~~~~~~~--~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
.. ..+++.||.+.|||+..+..+. ..+ ...+...+||+||..++....-|.+.|.
T Consensus 408 ~ri~msag~dgst~iwdi~eg~pik~y~~g-h~kl~d~kFSqdgts~~lsd~hgql~i~ 465 (1113)
T KOG0644|consen 408 PRIAMSAGYDGSTIIWDIWEGIPIKHYFIG-HGKLVDGKFSQDGTSIALSDDHGQLYIL 465 (1113)
T ss_pred cHhhhhccCCCceEeeecccCCcceeeecc-cceeeccccCCCCceEecCCCCCceEEe
Confidence 65 4578899999999999887663 334 4567788999999988877777777764
No 166
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.77 E-value=1.3e-17 Score=177.95 Aligned_cols=217 Identities=18% Similarity=0.293 Sum_probs=183.6
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeee
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTY 590 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~ 590 (786)
.-.|++......++++|+..++|+|||+....+.+.+++|.+.|+++.++-.+.+||+++..|.|.|..+.++.. ...|
T Consensus 81 ~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~-tt~f 159 (673)
T KOG4378|consen 81 NAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQK-TTTF 159 (673)
T ss_pred hHHHHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcc-ccce
Confidence 445555555568999999999999999998778888999999999999999999999999999999999988763 3333
Q ss_pred c-CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE----eecCCeEEEEEeCCCC-EEEEEECCCeEEEEEcC
Q 044075 591 T-GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR----ISKGGTVQVRFQPRLG-LLLAAASENVVSIFDVE 664 (786)
Q Consensus 591 ~-~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~----~~~~~i~~i~~sp~g~-~Ll~gs~dg~I~iwD~~ 664 (786)
. +....|.-+.|+|..+.++.+++.+|.|.+||+.....+. .+..+...|||+|... .|++.+.|..|++||++
T Consensus 160 ~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~ 239 (673)
T KOG4378|consen 160 TIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIR 239 (673)
T ss_pred ecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecc
Confidence 3 2245567999999999999999999999999998766553 3456778899999765 57778899999999999
Q ss_pred CCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC-eeEEEEccCCCceEEEEEeCCC
Q 044075 665 TDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG-ECIHELSSSGNKFHSCIFHPSY 729 (786)
Q Consensus 665 t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~fspdg 729 (786)
..+....+. ...+...|+|.++|.+|++|... .|..||++.. .++..+..|...|++++|-+.-
T Consensus 240 s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 240 SQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred cccccceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence 887776666 56789999999999999999888 9999999964 5788899999999999998764
No 167
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.77 E-value=2.5e-17 Score=171.19 Aligned_cols=235 Identities=20% Similarity=0.334 Sum_probs=183.3
Q ss_pred cCCCCCCeEEEEEccC--CCEEEEEeCCCcEEEEcCCCC---------------cceeeeecCCCCCeEEEEEecCCCeE
Q 044075 547 PDDHNHIITDVRFRPN--STQLATSSFDKTVRIWDAAKP---------------NFCLQTYTGHNNHVMSLDFHPKKNDL 609 (786)
Q Consensus 547 l~~h~~~V~sl~fspd--g~~Lasgs~Dg~I~VWdl~s~---------------~~~~~~~~~h~~~V~sl~~sp~g~~l 609 (786)
...|.+.|..+.-.+- ..+.++-+..|.|.||++... ..++.++.+|...=+.|+|+|-..-.
T Consensus 147 ~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~ 226 (440)
T KOG0302|consen 147 SIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGR 226 (440)
T ss_pred ccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccc
Confidence 3467777888777764 345566677899999997531 13466778899999999999966655
Q ss_pred EEEEcCCCcEEEEeCCCCee------eEeecCCeEEEEEeCCC-CEEEEEECCCeEEEEEcCCC--cEEEEEecCCCCEE
Q 044075 610 FCSCDGNSEIRFWNLSQYSC------ARISKGGTVQVRFQPRL-GLLLAAASENVVSIFDVETD--RLTHSFKGHSTEIH 680 (786)
Q Consensus 610 l~sgs~Dg~I~iwDl~~~~~------~~~~~~~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t~--~~i~~l~~h~~~I~ 680 (786)
+++|+.-+.|++|...++.- ...+...+..++|+|.. ..|++|+.|+.|+|||++.+ +.....+.|.+.|+
T Consensus 227 LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVN 306 (440)
T KOG0302|consen 227 LLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVN 306 (440)
T ss_pred cccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCcee
Confidence 66888889999999877542 22344667778999976 46788888999999999988 22333477999999
Q ss_pred EEEEcCCCCEEEEEeCC-eEEEEECCC---CeeEEEEccCCCceEEEEEeCCC-CEEEEEECCCeEEEEECCCCeE----
Q 044075 681 SVCWDTNGEYLASVSQD-SVRVWSLAS---GECIHELSSSGNKFHSCIFHPSY-PTLMVIGGYQSLELWNMAENKC---- 751 (786)
Q Consensus 681 sv~~spdg~~Lasgs~D-~I~vwDl~s---~~~i~~l~~~~~~I~sv~fspdg-~~L~sgs~dg~I~IwDl~~~~~---- 751 (786)
.|.|+.+-.+|++|++| +++|||++. +.++..|+.|..+|+++.|+|.. ..|++++.|..|.|||+.-..-
T Consensus 307 VISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~ 386 (440)
T KOG0302|consen 307 VISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEI 386 (440)
T ss_pred eEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhh
Confidence 99999988899999999 999999985 57889999999999999999964 5788888999999999864321
Q ss_pred -------------EEEccc--CCCeEEEEEcCCCC-EEEEEeCCCc
Q 044075 752 -------------MTIAAH--DCVISALAQSPVTG-MVASASHDKS 781 (786)
Q Consensus 752 -------------~~~~~h--~~~V~slafspdg~-~LaSgs~DG~ 781 (786)
..+.-| ...|..|.|++.-. +|++.+.||.
T Consensus 387 ~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGf 432 (440)
T KOG0302|consen 387 DQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGF 432 (440)
T ss_pred ccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccce
Confidence 023334 45688899998544 8889888884
No 168
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.77 E-value=8.8e-17 Score=187.10 Aligned_cols=289 Identities=21% Similarity=0.226 Sum_probs=211.8
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCC-CEEEEEECCCeEEEEEcCC-------CeeeeecCCCCCCeEEEEEccCCCEEEEE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDG-KLLASAGHDKKVVVWNMEN-------FQTECTPDDHNHIITDVRFRPNSTQLATS 569 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg-~~Lasgs~Dg~V~IWdl~t-------~~~~~~l~~h~~~V~sl~fspdg~~Lasg 569 (786)
.-..+..+..|...|..++.+++. .++++|+.||+|+||++.. .+...++......+.++.+.+++..+|++
T Consensus 1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~ 1116 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVS 1116 (1431)
T ss_pred cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEE
Confidence 345678888999999999998855 9999999999999999863 22334444456789999999999999999
Q ss_pred eCCCcEEEEcCCCCc--c----eeeeecCC-CCCe-EEEEEecCC-CeEEEEEcCCCcEEEEeCCCCeeeEee-----cC
Q 044075 570 SFDKTVRIWDAAKPN--F----CLQTYTGH-NNHV-MSLDFHPKK-NDLFCSCDGNSEIRFWNLSQYSCARIS-----KG 635 (786)
Q Consensus 570 s~Dg~I~VWdl~s~~--~----~~~~~~~h-~~~V-~sl~~sp~g-~~ll~sgs~Dg~I~iwDl~~~~~~~~~-----~~ 635 (786)
+.||.|++.+++... . ..+....+ .+.+ ..-+|.... ..+++.+...+.|..||+++....... .|
T Consensus 1117 t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG 1196 (1431)
T KOG1240|consen 1117 TKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHG 1196 (1431)
T ss_pred cCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcccc
Confidence 999999999987622 1 11111112 2233 333443332 336667778899999999876544332 37
Q ss_pred CeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec-CCCCEEEEEEcCC---CCEEEEEeC-C--eEEEEECCCCe
Q 044075 636 GTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG-HSTEIHSVCWDTN---GEYLASVSQ-D--SVRVWSLASGE 708 (786)
Q Consensus 636 ~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~-h~~~I~sv~~spd---g~~Lasgs~-D--~I~vwDl~s~~ 708 (786)
.+++++.+|.+.+++.|+..|.+.+||++-+.++.++.. +..+|..++.+|- ..+.++++. . .|.+|++.+|.
T Consensus 1197 ~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~ 1276 (1431)
T KOG1240|consen 1197 LVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGL 1276 (1431)
T ss_pred ceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCc
Confidence 889999999999999999999999999999988887763 5578888877763 345665554 3 79999999987
Q ss_pred eEEEEccC-C------------------CceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-----------------
Q 044075 709 CIHELSSS-G------------------NKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM----------------- 752 (786)
Q Consensus 709 ~i~~l~~~-~------------------~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~----------------- 752 (786)
+-..+... + -....+.+...+..+++|+.|..|+.||....+..
T Consensus 1277 ~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s 1356 (1431)
T KOG1240|consen 1277 RQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSES 1356 (1431)
T ss_pred ceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchh
Confidence 66655433 1 11223445555678999999999999997542100
Q ss_pred ----------------------------------------EEcccCCCeEEEEEcCCC-CEEEEEeCCCcEEEeC
Q 044075 753 ----------------------------------------TIAAHDCVISALAQSPVT-GMVASASHDKSVKIWK 786 (786)
Q Consensus 753 ----------------------------------------~~~~h~~~V~slafspdg-~~LaSgs~DG~I~IWd 786 (786)
....|...|+++++.... .+|++++.||.|+||+
T Consensus 1357 ~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1357 YDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred ccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 012477889999887644 4899999999999996
No 169
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.76 E-value=1.3e-16 Score=160.97 Aligned_cols=235 Identities=18% Similarity=0.347 Sum_probs=179.0
Q ss_pred cCCCCeEEEEEcCCC-----CEEEEEECCCeEEEEEcCCCeee----ee-----cCCCCCCeEEEEEcc-CCCEEEEEeC
Q 044075 507 KSSSKVTCCHFSSDG-----KLLASAGHDKKVVVWNMENFQTE----CT-----PDDHNHIITDVRFRP-NSTQLATSSF 571 (786)
Q Consensus 507 ~H~~~V~~lafSpdg-----~~Lasgs~Dg~V~IWdl~t~~~~----~~-----l~~h~~~V~sl~fsp-dg~~Lasgs~ 571 (786)
.|..+++.+-|.|+. ++|||+ +..++||.+...+.. .. -..+..++++..|+. +-++|.+++-
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs--~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSi 171 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATS--SDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI 171 (364)
T ss_pred CCCCCccceEecCCccccCcchhhcc--cCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecc
Confidence 488999999999976 357765 357999998742211 11 135678999999998 7789999999
Q ss_pred CCcEEEEcCCCCc--ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee-c-----CCeEEEEEe
Q 044075 572 DKTVRIWDAAKPN--FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS-K-----GGTVQVRFQ 643 (786)
Q Consensus 572 Dg~I~VWdl~s~~--~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~-~-----~~i~~i~~s 643 (786)
|-++.|||++++. .....+.+|...|..|+|...+..+|++++.||.|++||++..+-..+. + .....++|+
T Consensus 172 DTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswn 251 (364)
T KOG0290|consen 172 DTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWN 251 (364)
T ss_pred cCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccC
Confidence 9999999999862 2456688999999999999989999999999999999999986544332 2 234567787
Q ss_pred CCCC-EEEEEECC-CeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCC-CCEEEEEeCC-eEEEEECCCCe------eEEE
Q 044075 644 PRLG-LLLAAASE-NVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTN-GEYLASVSQD-SVRVWSLASGE------CIHE 712 (786)
Q Consensus 644 p~g~-~Ll~gs~d-g~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spd-g~~Lasgs~D-~I~vwDl~s~~------~i~~ 712 (786)
+... ++++-..| ..|.|.|++.. .++..+.+|...|+.|+|.|. ...|++|++| .+.+||+...- ++..
T Consensus 252 kqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPila 331 (364)
T KOG0290|consen 252 KQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILA 331 (364)
T ss_pred cCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhh
Confidence 7554 45554444 67999999976 788899999999999999995 5689999999 89999997531 2333
Q ss_pred EccCCCceEEEEEeCCCCEEEEEECCCeEEEE
Q 044075 713 LSSSGNKFHSCIFHPSYPTLMVIGGYQSLELW 744 (786)
Q Consensus 713 l~~~~~~I~sv~fspdg~~L~sgs~dg~I~Iw 744 (786)
+. .+..|..+.|++...--+++...+++.|.
T Consensus 332 y~-a~~EVNqi~Ws~~~~Dwiai~~~kkleiL 362 (364)
T KOG0290|consen 332 YT-AGGEVNQIQWSSSQPDWIAICFGKKLEIL 362 (364)
T ss_pred hh-ccceeeeeeecccCCCEEEEEecCeeeEE
Confidence 33 46789999999765544444445555543
No 170
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.76 E-value=6.8e-16 Score=169.10 Aligned_cols=260 Identities=13% Similarity=0.216 Sum_probs=180.6
Q ss_pred EEEECCCeEEEEEcCC-Ce--eeeecCCCCCCeEEEEEccCCCEEEEEe-CCCcEEEEcCCC-CcceeeeecCCCCCeEE
Q 044075 525 ASAGHDKKVVVWNMEN-FQ--TECTPDDHNHIITDVRFRPNSTQLATSS-FDKTVRIWDAAK-PNFCLQTYTGHNNHVMS 599 (786)
Q Consensus 525 asgs~Dg~V~IWdl~t-~~--~~~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~I~VWdl~s-~~~~~~~~~~h~~~V~s 599 (786)
++...++.|.+|++.+ ++ .+..+. +.+....++++|++++|++++ .++.|.+|+++. +................
T Consensus 6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~ 84 (330)
T PRK11028 6 IASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTH 84 (330)
T ss_pred EEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceE
Confidence 3446789999999964 32 344443 345677899999999987765 478899999973 22111111123345678
Q ss_pred EEEecCCCeEEEEEcCCCcEEEEeCCCC----eeeEeec--CCeEEEEEeCCCCEEEEEEC-CCeEEEEEcCCCcEEE--
Q 044075 600 LDFHPKKNDLFCSCDGNSEIRFWNLSQY----SCARISK--GGTVQVRFQPRLGLLLAAAS-ENVVSIFDVETDRLTH-- 670 (786)
Q Consensus 600 l~~sp~g~~ll~sgs~Dg~I~iwDl~~~----~~~~~~~--~~i~~i~~sp~g~~Ll~gs~-dg~I~iwD~~t~~~i~-- 670 (786)
++|+|+++.+++++..++.|.+|++.+. +...... .....++++|+++++++++. ++.|.+||+.+...+.
T Consensus 85 i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~ 164 (330)
T PRK11028 85 ISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQ 164 (330)
T ss_pred EEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCccccc
Confidence 9999999999988778999999999742 1222222 34567889999999877766 5999999998643221
Q ss_pred -----EEecCCCCEEEEEEcCCCCEEEEEeC-C-eEEEEECCC--C--eeEEEEccC------CCceEEEEEeCCCCEEE
Q 044075 671 -----SFKGHSTEIHSVCWDTNGEYLASVSQ-D-SVRVWSLAS--G--ECIHELSSS------GNKFHSCIFHPSYPTLM 733 (786)
Q Consensus 671 -----~l~~h~~~I~sv~~spdg~~Lasgs~-D-~I~vwDl~s--~--~~i~~l~~~------~~~I~sv~fspdg~~L~ 733 (786)
.+. .......+.|+|++++++++.+ + .|.+||+.. + +.+..+... ......+.++|++++++
T Consensus 165 ~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~ly 243 (330)
T PRK11028 165 EPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLY 243 (330)
T ss_pred CCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEE
Confidence 111 2344678999999999988876 4 999999973 3 334443321 11233688999999999
Q ss_pred EEEC-CCeEEEEECCCCe-EEEEccc---CCCeEEEEEcCCCCEEEEEeC-CCcEEEeC
Q 044075 734 VIGG-YQSLELWNMAENK-CMTIAAH---DCVISALAQSPVTGMVASASH-DKSVKIWK 786 (786)
Q Consensus 734 sgs~-dg~I~IwDl~~~~-~~~~~~h---~~~V~slafspdg~~LaSgs~-DG~I~IWd 786 (786)
++.. ++.|.+|++.... ...+..+ ......+.|+|+|++|+++.. +++|.||+
T Consensus 244 v~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~ 302 (330)
T PRK11028 244 ACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYE 302 (330)
T ss_pred EecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEE
Confidence 9864 6799999986432 2222222 234568999999999988775 88999984
No 171
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.75 E-value=3.2e-16 Score=178.44 Aligned_cols=257 Identities=18% Similarity=0.286 Sum_probs=191.1
Q ss_pred CCeEEEEEcCCCeeeeecCCCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEcCCCCcce-----eeeecCCCCCeEEEEEe
Q 044075 530 DKKVVVWNMENFQTECTPDDHNHIITDVRFRP-NSTQLATSSFDKTVRIWDAAKPNFC-----LQTYTGHNNHVMSLDFH 603 (786)
Q Consensus 530 Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s~~~~-----~~~~~~h~~~V~sl~~s 603 (786)
++.+.||++++.......-.-...|+|++|+| +..+|+.|+.+|.|.+||++..... ......|..+|+.+.|.
T Consensus 221 ~~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~ 300 (555)
T KOG1587|consen 221 DGVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWL 300 (555)
T ss_pred CceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEe
Confidence 34799999987633333334567899999999 6678888999999999999876642 12334688999999997
Q ss_pred cCCCe-EEEEEcCCCcEEEEeCCCCeee--------Ee-------ecCCeEEEEEeCCC-CEEEEEECCCeEEEEEcCCC
Q 044075 604 PKKND-LFCSCDGNSEIRFWNLSQYSCA--------RI-------SKGGTVQVRFQPRL-GLLLAAASENVVSIFDVETD 666 (786)
Q Consensus 604 p~g~~-ll~sgs~Dg~I~iwDl~~~~~~--------~~-------~~~~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t~ 666 (786)
.+... -|++++.||.|..|+++..... .. ....++.+.|.+.. ..|++|+.+|.|+.-+....
T Consensus 301 ~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~ 380 (555)
T KOG1587|consen 301 QNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGY 380 (555)
T ss_pred ccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCC
Confidence 65433 2448888999999998754321 01 11456778887644 56889999999988444332
Q ss_pred c--------EEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECC-CCeeEEEEccCCCceEEEEEeCCCCE-EEEE
Q 044075 667 R--------LTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLA-SGECIHELSSSGNKFHSCIFHPSYPT-LMVI 735 (786)
Q Consensus 667 ~--------~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~-s~~~i~~l~~~~~~I~sv~fspdg~~-L~sg 735 (786)
+ ....+..|.+.|.++.++|=+..++..+.| +|+||... ...++..+..+...|++++|+|.... |+++
T Consensus 381 ~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~ 460 (555)
T KOG1587|consen 381 TPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATV 460 (555)
T ss_pred cccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEE
Confidence 1 123445689999999999966544444447 99999988 67778888888888999999998765 4555
Q ss_pred ECCCeEEEEECCCCeE---EEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 736 GGYQSLELWNMAENKC---MTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 736 s~dg~I~IwDl~~~~~---~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
..||.|.|||+..... .....+....+.+.|++.|++|++|...|.|+||+
T Consensus 461 d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~ 514 (555)
T KOG1587|consen 461 DGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILK 514 (555)
T ss_pred cCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEE
Confidence 6699999999976543 34444566778888999999999999999999985
No 172
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.75 E-value=7.1e-18 Score=180.23 Aligned_cols=288 Identities=20% Similarity=0.338 Sum_probs=225.9
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec-CCCCCCeEEEEEcc--CCCEEEEEeCCCc
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP-DDHNHIITDVRFRP--NSTQLATSSFDKT 574 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l-~~h~~~V~sl~fsp--dg~~Lasgs~Dg~ 574 (786)
.+.....|.+|.+.|..|.|+..|..|++|+.|..|.+||....+....+ .+|...|..-.|.| +..-+++++.||.
T Consensus 131 r~~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgq 210 (559)
T KOG1334|consen 131 RLRLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQ 210 (559)
T ss_pred HhhhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCc
Confidence 34556688899999999999999999999999999999999988877766 67999999888988 4567999999999
Q ss_pred EEEEcCCCCccee--eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee------cC---CeEEEEEe
Q 044075 575 VRIWDAAKPNFCL--QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS------KG---GTVQVRFQ 643 (786)
Q Consensus 575 I~VWdl~s~~~~~--~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~------~~---~i~~i~~s 643 (786)
|++=.+...+++. ..+..|.++|.-++..|+..+-|.+|+.|+.+.-+|++.......+ +. ....++..
T Consensus 211 vr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~ 290 (559)
T KOG1334|consen 211 VRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVD 290 (559)
T ss_pred eeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecC
Confidence 9998876555433 4566799999999999999999999999999999999865432211 12 34667888
Q ss_pred CCCC-EEEEEECCCeEEEEEcCCCc------EEEEEec------CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC--C
Q 044075 644 PRLG-LLLAAASENVVSIFDVETDR------LTHSFKG------HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS--G 707 (786)
Q Consensus 644 p~g~-~Ll~gs~dg~I~iwD~~t~~------~i~~l~~------h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s--~ 707 (786)
|... .+++++.|-.+++||.+.-. .+..+.. ....|+|++|+.++.-|.+...| .|++|.-.. |
T Consensus 291 P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G 370 (559)
T KOG1334|consen 291 PRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDG 370 (559)
T ss_pred CCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccC
Confidence 8766 78899999999999987542 1233322 34569999999776555555555 899994432 2
Q ss_pred ----------eeEEE-EccCCC--ceEEEE-EeCCCCEEEEEECCCeEEEEECCCCeEEEE-cccCCCeEEEEEcCCCCE
Q 044075 708 ----------ECIHE-LSSSGN--KFHSCI-FHPSYPTLMVIGGYQSLELWNMAENKCMTI-AAHDCVISALAQSPVTGM 772 (786)
Q Consensus 708 ----------~~i~~-l~~~~~--~I~sv~-fspdg~~L~sgs~dg~I~IwDl~~~~~~~~-~~h~~~V~slafspdg~~ 772 (786)
..++. +++|.+ .|..+- |-|...|+++|+.-|.|.||+-.+++.+.+ .+-...|+||.-+|--.+
T Consensus 371 ~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~Pv 450 (559)
T KOG1334|consen 371 SEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPV 450 (559)
T ss_pred CCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCch
Confidence 12223 667744 355665 567889999999999999999999988743 344448999999999999
Q ss_pred EEEEeCCCcEEEe
Q 044075 773 VASASHDKSVKIW 785 (786)
Q Consensus 773 LaSgs~DG~I~IW 785 (786)
|||++-|..||||
T Consensus 451 LAsSGid~DVKIW 463 (559)
T KOG1334|consen 451 LASSGIDHDVKIW 463 (559)
T ss_pred hhccCCccceeee
Confidence 9999999999999
No 173
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.74 E-value=1.5e-16 Score=160.45 Aligned_cols=267 Identities=19% Similarity=0.268 Sum_probs=186.6
Q ss_pred EeecCCCCeEEEEEcC-CCCEEEEEECC-------CeEEEEEcCC---------CeeeeecC-CCCCCeEEEEEccCCCE
Q 044075 504 SIRKSSSKVTCCHFSS-DGKLLASAGHD-------KKVVVWNMEN---------FQTECTPD-DHNHIITDVRFRPNSTQ 565 (786)
Q Consensus 504 ~l~~H~~~V~~lafSp-dg~~Lasgs~D-------g~V~IWdl~t---------~~~~~~l~-~h~~~V~sl~fspdg~~ 565 (786)
.+..|.+.|+.|+-+| |.++|+++..+ ..+.||.+.. .+++..+. .+-+.|.||.|.|++..
T Consensus 58 vf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~k 137 (370)
T KOG1007|consen 58 VFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDK 137 (370)
T ss_pred hhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCe
Confidence 5667899999999999 56677776542 2478999874 23344443 45568999999999998
Q ss_pred EEEEeCCCcEEEEcCCCCcceeeee-----cCCCCCeEEEEEecC-CCeEEEEEcCCCcEEEEeCCCCeeeEeec----C
Q 044075 566 LATSSFDKTVRIWDAAKPNFCLQTY-----TGHNNHVMSLDFHPK-KNDLFCSCDGNSEIRFWNLSQYSCARISK----G 635 (786)
Q Consensus 566 Lasgs~Dg~I~VWdl~s~~~~~~~~-----~~h~~~V~sl~~sp~-g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----~ 635 (786)
|++-. |..|.+|++.........+ .+|....++-+|+|. ....+ ....|+++..||+++.++...+. .
T Consensus 138 lasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv-~tt~d~tl~~~D~RT~~~~~sI~dAHgq 215 (370)
T KOG1007|consen 138 LASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQV-ATTSDSTLQFWDLRTMKKNNSIEDAHGQ 215 (370)
T ss_pred eEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceE-EEeCCCcEEEEEccchhhhcchhhhhcc
Confidence 88776 8899999998776533322 235667888999983 23344 33448999999999877665544 2
Q ss_pred CeEEEEEeCCCCE-EEEEECCCeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCCC-CEEEEEeCC-eEEEEECCCCeeEE
Q 044075 636 GTVQVRFQPRLGL-LLAAASENVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTNG-EYLASVSQD-SVRVWSLASGECIH 711 (786)
Q Consensus 636 ~i~~i~~sp~g~~-Ll~gs~dg~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spdg-~~Lasgs~D-~I~vwDl~s~~~i~ 711 (786)
.+..+.|+|+..+ |++++.||.|+|||.+.. .++..+.+|..+|.+|.|+|.. .+|++++.| .|.+|...+-....
T Consensus 216 ~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~ 295 (370)
T KOG1007|consen 216 RVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQ 295 (370)
T ss_pred eeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEecccccccc
Confidence 3678899998765 666777899999999875 6788999999999999999954 577888888 89998765321111
Q ss_pred EEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCC-EEEEEeCCCcEEE
Q 044075 712 ELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTG-MVASASHDKSVKI 784 (786)
Q Consensus 712 ~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~-~LaSgs~DG~I~I 784 (786)
. +.|..+..-. -+.|..=++=-+.++.+.++..|.+.|++++|+.-.. ++|+-+.||.|.|
T Consensus 296 q----------i~~~~dese~--e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviI 357 (370)
T KOG1007|consen 296 Q----------IEFEDDESES--EDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVII 357 (370)
T ss_pred c----------cccccccccC--cchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEe
Confidence 1 1111110000 0000000111244555567779999999999998666 6788899999876
No 174
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.74 E-value=2.7e-16 Score=160.78 Aligned_cols=232 Identities=15% Similarity=0.251 Sum_probs=178.0
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce------------eeeecCCCCCeEEEEEecC------CCeEEEEEcC
Q 044075 554 ITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC------------LQTYTGHNNHVMSLDFHPK------KNDLFCSCDG 615 (786)
Q Consensus 554 V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~------------~~~~~~h~~~V~sl~~sp~------g~~ll~sgs~ 615 (786)
...+.|+|||..|++-+.|..+++|++...... ..........|...+|-+. ...++++.+.
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr 131 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR 131 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence 456889999999999999999999987532110 0011123456778888531 3457888999
Q ss_pred CCcEEEEeCCCCeeeEeec--------CCeEEEEEeCCCCEEEEEECCCeEEEEEc-CCCcE--EEEEe-----cCCCCE
Q 044075 616 NSEIRFWNLSQYSCARISK--------GGTVQVRFQPRLGLLLAAASENVVSIFDV-ETDRL--THSFK-----GHSTEI 679 (786)
Q Consensus 616 Dg~I~iwDl~~~~~~~~~~--------~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~-~t~~~--i~~l~-----~h~~~I 679 (786)
+.-|++||.-+++....+. ....+++|+|||..|++|.. ..|++||+ +.+.. +.... +..+-|
T Consensus 132 ~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGyk-rcirvFdt~RpGr~c~vy~t~~~~k~gq~gii 210 (406)
T KOG2919|consen 132 DQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYK-RCIRVFDTSRPGRDCPVYTTVTKGKFGQKGII 210 (406)
T ss_pred cCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeeccc-ceEEEeeccCCCCCCcchhhhhccccccccee
Confidence 9999999999988766554 24568999999999988765 88999999 55532 22221 236678
Q ss_pred EEEEEcCCC-CEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEEC-CCeEEEEECCCCeEE--EE
Q 044075 680 HSVCWDTNG-EYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGG-YQSLELWNMAENKCM--TI 754 (786)
Q Consensus 680 ~sv~~spdg-~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl~~~~~~--~~ 754 (786)
.+++|+|.. +.+++++.. .+-||.-....++..+-+|.+.|+.+.|.++|+.|++|.. +..|.+||++..+.. .+
T Consensus 211 sc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L 290 (406)
T KOG2919|consen 211 SCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYAL 290 (406)
T ss_pred eeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhh
Confidence 999999954 589999988 8888888888999999999999999999999999999986 569999999976543 45
Q ss_pred cccCC-CeEE--EEEcCCCCEEEEEeCCCcEEEeC
Q 044075 755 AAHDC-VISA--LAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 755 ~~h~~-~V~s--lafspdg~~LaSgs~DG~I~IWd 786 (786)
..|.+ .=.. ....|++++|++|+.||.|++||
T Consensus 291 ~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwd 325 (406)
T KOG2919|consen 291 ERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWD 325 (406)
T ss_pred hhhccCccceEEEecCCCCceeeccCCCccEEEEe
Confidence 55654 2223 34468899999999999999997
No 175
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=5.3e-17 Score=176.61 Aligned_cols=249 Identities=22% Similarity=0.304 Sum_probs=189.1
Q ss_pred CcceeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC--
Q 044075 463 NVESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN-- 540 (786)
Q Consensus 463 ~~~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t-- 540 (786)
.++..+...+.++..-+|.+.+ ...+....++++.++++|.++|.|+++.++++.+++|+.||+|+.|++..
T Consensus 304 ~sep~lit~sed~~lk~WnLqk------~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~ 377 (577)
T KOG0642|consen 304 PSEPVLITASEDGTLKLWNLQK------AKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQ 377 (577)
T ss_pred CCCCeEEEeccccchhhhhhcc------cCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCC
Confidence 3455666677777777777743 23445667899999999999999999999999999999999999996641
Q ss_pred --------CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEE
Q 044075 541 --------FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCS 612 (786)
Q Consensus 541 --------~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~s 612 (786)
.....++.+|.+.|+.+++++....|++|+.||+|++|+......+........+.-.++++......+.++
T Consensus 378 dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~ 457 (577)
T KOG0642|consen 378 DPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLA 457 (577)
T ss_pred CcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhh
Confidence 123456789999999999999988999999999999999876653222222222344566665433223323
Q ss_pred EcCCCcEEEEeCCCCeeeEeec----------CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEE
Q 044075 613 CDGNSEIRFWNLSQYSCARISK----------GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSV 682 (786)
Q Consensus 613 gs~Dg~I~iwDl~~~~~~~~~~----------~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv 682 (786)
...-+.--++++.....+.++. ..+..+.++|.....+++..|+.|+++|..++++++....|...++++
T Consensus 458 s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtsl 537 (577)
T KOG0642|consen 458 SFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSL 537 (577)
T ss_pred hcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceecce
Confidence 2223333334444333333332 345678889999999999999999999999999999999999999999
Q ss_pred EEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCC
Q 044075 683 CWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSG 717 (786)
Q Consensus 683 ~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~ 717 (786)
++.|+|-+|++++.| .|++|.+....|+.....|.
T Consensus 538 ai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r 573 (577)
T KOG0642|consen 538 AIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR 573 (577)
T ss_pred eecCCCceEEeecCCceeehhhccchheeecccccc
Confidence 999999999999999 99999998888877766553
No 176
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.73 E-value=4.1e-15 Score=162.93 Aligned_cols=244 Identities=12% Similarity=0.169 Sum_probs=172.3
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEcCC-Cee--eeecCCCCCCeEEEEEccCCCEEEEEeC-CCc
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAG-HDKKVVVWNMEN-FQT--ECTPDDHNHIITDVRFRPNSTQLATSSF-DKT 574 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs-~Dg~V~IWdl~t-~~~--~~~l~~h~~~V~sl~fspdg~~Lasgs~-Dg~ 574 (786)
+.+..+. +.+....++++|++++|++++ .++.|.+|+++. ++. +.... .......++|+|++++|++++. ++.
T Consensus 26 ~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~ 103 (330)
T PRK11028 26 TLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANC 103 (330)
T ss_pred eeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCe
Confidence 3444444 345678899999999987765 478899999973 332 22222 2335678999999999888875 889
Q ss_pred EEEEcCCCCcce---eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE--------e-ecCCeEEEEE
Q 044075 575 VRIWDAAKPNFC---LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR--------I-SKGGTVQVRF 642 (786)
Q Consensus 575 I~VWdl~s~~~~---~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~--------~-~~~~i~~i~~ 642 (786)
|.+|++++.... ...+ .+...+.+++++|+++.+++++..++.|.+||+.+...+. . .......+.|
T Consensus 104 v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~ 182 (330)
T PRK11028 104 VSVSPLDKDGIPVAPIQII-EGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVF 182 (330)
T ss_pred EEEEEECCCCCCCCceeec-cCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEE
Confidence 999999753321 2222 2334567889999999999888889999999997632221 1 1234567899
Q ss_pred eCCCCEEEEEEC-CCeEEEEEcCC--C--cEEEEEecC------CCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCe-
Q 044075 643 QPRLGLLLAAAS-ENVVSIFDVET--D--RLTHSFKGH------STEIHSVCWDTNGEYLASVSQD--SVRVWSLASGE- 708 (786)
Q Consensus 643 sp~g~~Ll~gs~-dg~I~iwD~~t--~--~~i~~l~~h------~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~- 708 (786)
+|++++++++.. ++.|.+||++. + +.+..+..+ ......+.++|++++++++... .|.+|++....
T Consensus 183 ~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~ 262 (330)
T PRK11028 183 HPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGS 262 (330)
T ss_pred CCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCC
Confidence 999999998887 89999999973 3 233333321 1233468899999999988653 89999986532
Q ss_pred ---eEEEEccCCCceEEEEEeCCCCEEEEEEC-CCeEEEEECC
Q 044075 709 ---CIHELSSSGNKFHSCIFHPSYPTLMVIGG-YQSLELWNMA 747 (786)
Q Consensus 709 ---~i~~l~~~~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl~ 747 (786)
.+..+.. ......+.++|++++|+++.. ++.|.+|+++
T Consensus 263 ~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 263 VLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred eEEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 2333222 234567899999999998875 7899999875
No 177
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.73 E-value=2e-16 Score=170.26 Aligned_cols=260 Identities=15% Similarity=0.253 Sum_probs=193.3
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEE-cc-------CCCEEEEEeCCCcEEEE
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRF-RP-------NSTQLATSSFDKTVRIW 578 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~f-sp-------dg~~Lasgs~Dg~I~VW 578 (786)
.|...|.||.|+.+...+.+++ |..+.+|+--+......+......|....+ -+ ....|+.++.||.+.|.
T Consensus 12 r~~e~vc~v~w~~~eei~~~~d-Dh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il 90 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSD-DHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVIL 90 (737)
T ss_pred ccceeEEeecccccceEEEecc-CceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEe
Confidence 4777788999998887777665 555555553333333333222222221111 11 23468888999999998
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC--eeeEeecCCeEEEEEeCCCCEEEEEECCC
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY--SCARISKGGTVQVRFQPRLGLLLAAASEN 656 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~--~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg 656 (786)
+-.. ...+....|.+.|.|-.|+|+|.-++ ++++||.|++|.-... ..+......+.|++|.|+.+.++.+. .+
T Consensus 91 ~k~~--rVE~sv~AH~~A~~~gRW~~dGtgLl-t~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~-g~ 166 (737)
T KOG1524|consen 91 NKSA--RVERSISAHAAAISSGRWSPDGAGLL-TAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQ-GG 166 (737)
T ss_pred cccc--hhhhhhhhhhhhhhhcccCCCCceee-eecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEec-CC
Confidence 7533 24667889999999999999999887 8899999999986642 22333457889999999988776654 47
Q ss_pred eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEE
Q 044075 657 VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVI 735 (786)
Q Consensus 657 ~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sg 735 (786)
.+.|-.+.....+-..+.|.+-|.++.|++..+++++|++| ..+|||-. |..+..-..|+.+|++++|.|+ +.++++
T Consensus 167 h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd-~~~~v~ 244 (737)
T KOG1524|consen 167 HISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPE-KDYLLW 244 (737)
T ss_pred eEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccceeeeeeccc-cceeee
Confidence 78888887777778889999999999999999999999999 99999964 5666777789999999999999 444444
Q ss_pred ECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 736 GGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 736 s~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~I 784 (786)
+. +++++ .....+.|..++||+||..+++|+..|.|.+
T Consensus 245 S~-nt~R~----------~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 245 SY-NTARF----------SSPRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred ee-eeeee----------cCCCccceEEEEEcCCCceeeccccCceEEE
Confidence 43 34442 2245678999999999999999999987754
No 178
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=4.6e-16 Score=178.56 Aligned_cols=276 Identities=18% Similarity=0.269 Sum_probs=208.3
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCC---CCCeEEEEEcc--CCCEEEEEeCCCcEEEEcCCCC
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDH---NHIITDVRFRP--NSTQLATSSFDKTVRIWDAAKP 583 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h---~~~V~sl~fsp--dg~~Lasgs~Dg~I~VWdl~s~ 583 (786)
...-..+.|+|-...++++...-.|+|||.+.++....|..+ ...|+.+.+.. |..++++|+.||.||||+-...
T Consensus 1064 ~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~ 1143 (1387)
T KOG1517|consen 1064 NQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYAD 1143 (1387)
T ss_pred CCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccc
Confidence 345677889998889999987889999999999888877554 35788998875 5568999999999999964332
Q ss_pred c----ceeeeec-------CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec----CCeEEEEE-eCCCC
Q 044075 584 N----FCLQTYT-------GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK----GGTVQVRF-QPRLG 647 (786)
Q Consensus 584 ~----~~~~~~~-------~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----~~i~~i~~-sp~g~ 647 (786)
. ..+..+. +..+.-.-++|.....+++++|+ -..|+|||.....++.... ..++.+.- ...|+
T Consensus 1144 ~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd-~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn 1222 (1387)
T KOG1517|consen 1144 KWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGD-VRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGN 1222 (1387)
T ss_pred ccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCC-eeEEEEEecccceeEeecccCCCccceeecccccCCc
Confidence 1 1222221 11222244677777777886665 7899999999887776554 22333332 34478
Q ss_pred EEEEEECCCeEEEEEcCCC---cEEEEEecCCCC--EEEEEEcCCCCE-EEEEeCC-eEEEEECCCCeeE--EEEccC--
Q 044075 648 LLLAAASENVVSIFDVETD---RLTHSFKGHSTE--IHSVCWDTNGEY-LASVSQD-SVRVWSLASGECI--HELSSS-- 716 (786)
Q Consensus 648 ~Ll~gs~dg~I~iwD~~t~---~~i~~l~~h~~~--I~sv~~spdg~~-Lasgs~D-~I~vwDl~s~~~i--~~l~~~-- 716 (786)
.+++|..||.|++||.+.. ..+...+.|... |..+.+-+.|.- |++|+.+ .|++||++..... .++..|
T Consensus 1223 ~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~ 1302 (1387)
T KOG1517|consen 1223 IIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWE 1302 (1387)
T ss_pred eEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccc
Confidence 9999999999999999875 356777788887 999999887654 8999988 9999999984222 222222
Q ss_pred -CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcc-------cCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 717 -GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAA-------HDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 717 -~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~-------h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
++..+++..|++.+.+++|+. +.|.||++.......+.. ..+.+.|++|+|---+||+|+.|.+|.||.
T Consensus 1303 yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs 1379 (1387)
T KOG1517|consen 1303 YGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYS 1379 (1387)
T ss_pred cCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEee
Confidence 235899999999999999988 999999998776553332 345789999999999999999999999983
No 179
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.72 E-value=6.8e-16 Score=161.41 Aligned_cols=230 Identities=16% Similarity=0.272 Sum_probs=177.8
Q ss_pred CCCEEEEE---ECCCeEEEEEcC-CCee---eeecCCCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEcCCCCc------c
Q 044075 520 DGKLLASA---GHDKKVVVWNME-NFQT---ECTPDDHNHIITDVRFRP-NSTQLATSSFDKTVRIWDAAKPN------F 585 (786)
Q Consensus 520 dg~~Lasg---s~Dg~V~IWdl~-t~~~---~~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s~~------~ 585 (786)
+.++||+. +..|...|.-+. +++. .-.+.+|+++|.+++|+| +...||+|++|.+|.||.+..+. .
T Consensus 43 NPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~lte 122 (472)
T KOG0303|consen 43 NPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTE 122 (472)
T ss_pred CCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCccc
Confidence 45566653 223444444433 2322 234579999999999999 67789999999999999986543 3
Q ss_pred eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee--cCCeEEEEEeCCCCEEEEEECCCeEEEEEc
Q 044075 586 CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS--KGGTVQVRFQPRLGLLLAAASENVVSIFDV 663 (786)
Q Consensus 586 ~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~--~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~ 663 (786)
.+..+.+|...|..+.|||...+++++++.|..|.+|++.+++.+..+ ..-+.+++|+.+|.+|++++.|..|+|||.
T Consensus 123 pvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dp 202 (472)
T KOG0303|consen 123 PVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDP 202 (472)
T ss_pred ceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcC
Confidence 467789999999999999999999999999999999999998866544 466889999999999999999999999999
Q ss_pred CCCcEEEEEecCCC-CEEEEEEcCCCCEEEEEeC---C-eEEEEECCCCe---eEEEEccCCCceEEEEEeCCCCEEEEE
Q 044075 664 ETDRLTHSFKGHST-EIHSVCWDTNGEYLASVSQ---D-SVRVWSLASGE---CIHELSSSGNKFHSCIFHPSYPTLMVI 735 (786)
Q Consensus 664 ~t~~~i~~l~~h~~-~I~sv~~spdg~~Lasgs~---D-~I~vwDl~s~~---~i~~l~~~~~~I~sv~fspdg~~L~sg 735 (786)
++++.+..-.+|.+ .-..+.|-.+|.++.+|-. + .+-+||...-+ ...++.. .+.|.---|.++.+.++.+
T Consensus 203 r~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDt-SnGvl~PFyD~dt~ivYl~ 281 (472)
T KOG0303|consen 203 RRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDT-SNGVLLPFYDPDTSIVYLC 281 (472)
T ss_pred CCCcEeeecccccCCCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEecc-CCceEEeeecCCCCEEEEE
Confidence 99999988877765 3456678888986666643 2 69999987643 2334433 4556666788888877665
Q ss_pred E-CCCeEEEEECCCCe
Q 044075 736 G-GYQSLELWNMAENK 750 (786)
Q Consensus 736 s-~dg~I~IwDl~~~~ 750 (786)
+ +|+.|+.|.+....
T Consensus 282 GKGD~~IRYyEit~d~ 297 (472)
T KOG0303|consen 282 GKGDSSIRYFEITNEP 297 (472)
T ss_pred ecCCcceEEEEecCCC
Confidence 5 68899999998776
No 180
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.71 E-value=1.5e-15 Score=150.02 Aligned_cols=224 Identities=16% Similarity=0.270 Sum_probs=174.1
Q ss_pred CeEEEEEccCCCEEEEEeCCCcEEEEcCCC---------CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEe
Q 044075 553 IITDVRFRPNSTQLATSSFDKTVRIWDAAK---------PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWN 623 (786)
Q Consensus 553 ~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s---------~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwD 623 (786)
.|..-+|+|.+++|++|..+|.|.+..+.+ ++..+..+.+|.++|..++|+ +. ++++|+ ||.|+-|.
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~-~Lls~g-dG~V~gw~ 87 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DD-FLLSGG-DGLVYGWE 87 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hh-heeecc-CceEEEee
Confidence 355668999999999999999999998753 233455668999999999999 23 444666 69999998
Q ss_pred CCCCee----eEe------------ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCC
Q 044075 624 LSQYSC----ARI------------SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTN 687 (786)
Q Consensus 624 l~~~~~----~~~------------~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spd 687 (786)
.+.... ... .-..|..+-..|..+.++.++.|+.++.||+++++..+.+++|...|.++.--..
T Consensus 88 W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~ 167 (325)
T KOG0649|consen 88 WNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNA 167 (325)
T ss_pred ehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeeccc
Confidence 764322 110 0135677888998888888889999999999999999999999999999998555
Q ss_pred CCEEEEEeCC-eEEEEECCCCeeEEEEccC----------CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcc
Q 044075 688 GEYLASVSQD-SVRVWSLASGECIHELSSS----------GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAA 756 (786)
Q Consensus 688 g~~Lasgs~D-~I~vwDl~s~~~i~~l~~~----------~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~ 756 (786)
..-+++|++| +++|||.++++++..+... ...|.+++.+.+ ++++|+ ...+.+|+++..++..+..
T Consensus 168 ~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~ed--WlvCGg-Gp~lslwhLrsse~t~vfp 244 (325)
T KOG0649|consen 168 NGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNED--WLVCGG-GPKLSLWHLRSSESTCVFP 244 (325)
T ss_pred CcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCc--eEEecC-CCceeEEeccCCCceEEEe
Confidence 6678899999 9999999999998877542 223555555443 555554 4579999999999998888
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 757 HDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 757 h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
-...|..+.|..| .+++++..+.|.-|
T Consensus 245 ipa~v~~v~F~~d--~vl~~G~g~~v~~~ 271 (325)
T KOG0649|consen 245 IPARVHLVDFVDD--CVLIGGEGNHVQSY 271 (325)
T ss_pred cccceeEeeeecc--eEEEeccccceeee
Confidence 8889999999744 67777766666554
No 181
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.70 E-value=4e-16 Score=159.97 Aligned_cols=236 Identities=21% Similarity=0.381 Sum_probs=179.8
Q ss_pred CCCCeEEEEEcCC----CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCC-CEEEEEeCCCcEEEEcCCC
Q 044075 508 SSSKVTCCHFSSD----GKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNS-TQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 508 H~~~V~~lafSpd----g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg-~~Lasgs~Dg~I~VWdl~s 582 (786)
|......|+|+-| ..+||+|+.-|.|+|.|+.+++....+.+|...|..|.|.|+. +++++++.|.+||+|++.+
T Consensus 88 ~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~ 167 (385)
T KOG1034|consen 88 HDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQT 167 (385)
T ss_pred CCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccC
Confidence 6677788888763 4589999999999999999999999999999999999999954 6899999999999999998
Q ss_pred Ccceeeee---cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-------------------------
Q 044075 583 PNFCLQTY---TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK------------------------- 634 (786)
Q Consensus 583 ~~~~~~~~---~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~------------------------- 634 (786)
.. ++..+ .+|.+.|.+++|++++.++ ++|+.|..|++|++...+.....+
T Consensus 168 ~~-Cv~VfGG~egHrdeVLSvD~~~~gd~i-~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fs 245 (385)
T KOG1034|consen 168 DV-CVAVFGGVEGHRDEVLSVDFSLDGDRI-ASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFS 245 (385)
T ss_pred Ce-EEEEecccccccCcEEEEEEcCCCCee-eccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcccccccccc
Confidence 76 55554 5799999999999999855 599999999999998432111100
Q ss_pred ------CCeEEEEEeCCCCEEEEEECCCeEEEEEc-CCCc-------------EEEEEecCCCCEEEE--EEcCCCCEEE
Q 044075 635 ------GGTVQVRFQPRLGLLLAAASENVVSIFDV-ETDR-------------LTHSFKGHSTEIHSV--CWDTNGEYLA 692 (786)
Q Consensus 635 ------~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~-~t~~-------------~i~~l~~h~~~I~sv--~~spdg~~La 692 (786)
..+.|+.| -|+++++-+.++.|..|.. +-.+ .+..+......|.-| +|++-.+.|+
T Consensus 246 t~diHrnyVDCvrw--~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la 323 (385)
T KOG1034|consen 246 TTDIHRNYVDCVRW--FGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLA 323 (385)
T ss_pred ccccccchHHHHHH--HhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHh
Confidence 00111111 1467888888999999987 2111 223333334445555 4566788999
Q ss_pred EEeCC-eEEEEECCCCeeE--EEEc--cCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 693 SVSQD-SVRVWSLASGECI--HELS--SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 693 sgs~D-~I~vwDl~s~~~i--~~l~--~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
.|... .|.+||++..++. .++. .....|...+|+.|+..|+..+.|+.|.-||..
T Consensus 324 ~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 324 LGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred hccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 99888 9999999976542 2222 235678999999999999999999999999854
No 182
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.69 E-value=4.6e-15 Score=169.11 Aligned_cols=276 Identities=18% Similarity=0.322 Sum_probs=207.5
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC----CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN----FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t----~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s 582 (786)
.|.-.++|.++||+++++|+|..||.|.||.--. ......+.-|...|++++|+++|.+|++|+..|.+.+|.+.+
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T 282 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET 282 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence 4777799999999999999999999999996332 233456677889999999999999999999999999999999
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee--------------cCCeEEEEEeCCCCE
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS--------------KGGTVQVRFQPRLGL 648 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~--------------~~~i~~i~~sp~g~~ 648 (786)
++ ...+..-.++|..+.++|+++... .+..|..|.+....+.+..... .+-.+.++++|.-+.
T Consensus 283 ~~--kqfLPRLgs~I~~i~vS~ds~~~s-l~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~ 359 (792)
T KOG1963|consen 283 GK--KQFLPRLGSPILHIVVSPDSDLYS-LVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNS 359 (792)
T ss_pred CC--cccccccCCeeEEEEEcCCCCeEE-EEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCc
Confidence 87 566777789999999999988665 5556999998877543332221 233456888998888
Q ss_pred EEEEECCCeEEEEEcCCCcEEEEEec-----------CCCCEEEEEEcCCCCEEEEEe--------CC---eEEEEECCC
Q 044075 649 LLAAASENVVSIFDVETDRLTHSFKG-----------HSTEIHSVCWDTNGEYLASVS--------QD---SVRVWSLAS 706 (786)
Q Consensus 649 Ll~gs~dg~I~iwD~~t~~~i~~l~~-----------h~~~I~sv~~spdg~~Lasgs--------~D---~I~vwDl~s 706 (786)
++..+..+.|.+||+-+.+.+..+.. +...++.++.+..|.++++.- .| .+++|-...
T Consensus 360 ~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~ 439 (792)
T KOG1963|consen 360 LVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNP 439 (792)
T ss_pred eeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcC
Confidence 88899999999999998876665541 223467777788899998874 11 588897654
Q ss_pred Ce----eEEE-EccCCCceEEEEEe-CCCC-EEEEEECCCeEEEEECCCCe----------EE-EEcccCCCeEEEEEcC
Q 044075 707 GE----CIHE-LSSSGNKFHSCIFH-PSYP-TLMVIGGYQSLELWNMAENK----------CM-TIAAHDCVISALAQSP 768 (786)
Q Consensus 707 ~~----~i~~-l~~~~~~I~sv~fs-pdg~-~L~sgs~dg~I~IwDl~~~~----------~~-~~~~h~~~V~slafsp 768 (786)
.. .... ...|+..+...++. +... ..++++.||.++||-+.+.+ |. .-..|..++++++|+.
T Consensus 440 ~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~ 519 (792)
T KOG1963|consen 440 NSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQ 519 (792)
T ss_pred CcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcC
Confidence 32 2222 23566555554444 3333 78999999999999874322 22 2225899999999999
Q ss_pred CCCEEEEEeCCCcEEEeC
Q 044075 769 VTGMVASASHDKSVKIWK 786 (786)
Q Consensus 769 dg~~LaSgs~DG~I~IWd 786 (786)
||.+| +++.|++|.|||
T Consensus 520 dGsll-a~s~~~~Itiwd 536 (792)
T KOG1963|consen 520 DGSLL-AVSFDDTITIWD 536 (792)
T ss_pred CCcEE-EEecCCEEEEec
Confidence 99655 566788999997
No 183
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.69 E-value=1.8e-15 Score=171.79 Aligned_cols=231 Identities=14% Similarity=0.166 Sum_probs=166.3
Q ss_pred CCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC---CcEEEEcCCCCcc-eeeeecCCCCCeEEEEEecC
Q 044075 530 DKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFD---KTVRIWDAAKPNF-CLQTYTGHNNHVMSLDFHPK 605 (786)
Q Consensus 530 Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D---g~I~VWdl~s~~~-~~~~~~~h~~~V~sl~~sp~ 605 (786)
+..|.|||.+... ...+..|...|.+++|+|||+.|+.++.+ ..|++||+.++.. .+..+.+ ...+++|+|+
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g---~~~~~~wSPD 258 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRG---HNGAPAFSPD 258 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCC---ccCceeECCC
Confidence 4689999987554 45667788899999999999999887754 3699999987652 2222333 3457899999
Q ss_pred CCeEEEEEcCCCcEEE--EeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEE-CCCeEEEEEcCCC-cEEEEEecCCCCE
Q 044075 606 KNDLFCSCDGNSEIRF--WNLSQYSCARISK--GGTVQVRFQPRLGLLLAAA-SENVVSIFDVETD-RLTHSFKGHSTEI 679 (786)
Q Consensus 606 g~~ll~sgs~Dg~I~i--wDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs-~dg~I~iwD~~t~-~~i~~l~~h~~~I 679 (786)
++.++++.+.+|.+.+ ||+.++....... ..+....|+|+++.|+.++ .++...||++... .....+ .+..
T Consensus 259 G~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~-- 335 (429)
T PRK01742 259 GSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG-- 335 (429)
T ss_pred CCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--
Confidence 9998877777886555 5666655444332 3456789999999877666 4677777776432 222223 3433
Q ss_pred EEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEEC---CCCeEEEEcc
Q 044075 680 HSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNM---AENKCMTIAA 756 (786)
Q Consensus 680 ~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl---~~~~~~~~~~ 756 (786)
.++.|+|||++|+..+.+.+.+||+.+++....... .....+.|+|++++|++++.++.+.+|++ .......+..
T Consensus 336 ~~~~~SpDG~~ia~~~~~~i~~~Dl~~g~~~~lt~~--~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~ 413 (429)
T PRK01742 336 YSAQISADGKTLVMINGDNVVKQDLTSGSTEVLSST--FLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPG 413 (429)
T ss_pred CCccCCCCCCEEEEEcCCCEEEEECCCCCeEEecCC--CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccC
Confidence 457899999999988878777799998865432222 23456789999999999999987777664 3444456778
Q ss_pred cCCCeEEEEEcCC
Q 044075 757 HDCVISALAQSPV 769 (786)
Q Consensus 757 h~~~V~slafspd 769 (786)
|.+.+..++|+|-
T Consensus 414 ~~g~~~~p~wsp~ 426 (429)
T PRK01742 414 SDGQVKFPAWSPY 426 (429)
T ss_pred CCCCCCCcccCCC
Confidence 8888999999984
No 184
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.69 E-value=6.7e-14 Score=145.99 Aligned_cols=231 Identities=16% Similarity=0.290 Sum_probs=176.4
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCC--cEEEEcCCCCcce
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDK--TVRIWDAAKPNFC 586 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg--~I~VWdl~s~~~~ 586 (786)
...|..+.|+.|...|..|+.|| .++|+.+..............|..+-|+ ..++|..+.+. .+++++++....+
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~~~I 81 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFS--SSLVAIVSIKQPRKLKVVHFKKKTTI 81 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecc--cceeEEEecCCCceEEEEEcccCceE
Confidence 34577888999999999999888 7888887665533333333455556666 45666666543 4899998876533
Q ss_pred eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC------CeEEEEEeCCCCEEEEEEC--CCeE
Q 044075 587 LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKG------GTVQVRFQPRLGLLLAAAS--ENVV 658 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~------~i~~i~~sp~g~~Ll~gs~--dg~I 658 (786)
...+ ....|.++.++. +.++ +|= ...|+|||++..+.+..+.. ++..+.++..+.+++.-+. .|.|
T Consensus 82 Ce~~--fpt~IL~VrmNr--~RLv-V~L-ee~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV 155 (391)
T KOG2110|consen 82 CEIF--FPTSILAVRMNR--KRLV-VCL-EESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDV 155 (391)
T ss_pred EEEe--cCCceEEEEEcc--ceEE-EEE-cccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceE
Confidence 3333 346799999874 3444 444 34499999999888766542 2344445555567776543 5899
Q ss_pred EEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCC--CceEEEEEeCCCCEEEE
Q 044075 659 SIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSG--NKFHSCIFHPSYPTLMV 734 (786)
Q Consensus 659 ~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~--~~I~sv~fspdg~~L~s 734 (786)
.+||+.+-+.+..+..|.+.+-+++|+++|.+||++|+. .||||++.+|..+.+|+... ..|.+++|+|++.+|++
T Consensus 156 ~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~ 235 (391)
T KOG2110|consen 156 VLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAA 235 (391)
T ss_pred EEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEE
Confidence 999999999999999999999999999999999999998 69999999999999987553 45789999999999999
Q ss_pred EECCCeEEEEECCC
Q 044075 735 IGGYQSLELWNMAE 748 (786)
Q Consensus 735 gs~dg~I~IwDl~~ 748 (786)
.+..++|+||.++.
T Consensus 236 sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 236 SSNTETVHIFKLEK 249 (391)
T ss_pred ecCCCeEEEEEecc
Confidence 99999999998864
No 185
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.69 E-value=1.1e-14 Score=143.86 Aligned_cols=266 Identities=15% Similarity=0.187 Sum_probs=193.9
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCC----------CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcC
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMEN----------FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t----------~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl 580 (786)
.|.+-+|+|.+++|++|..+|.|.|..+++ ...+.....|.++|+.++|. ..+|++|+ ||.|+-|..
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W 88 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEW 88 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEeee
Confidence 477778999999999999999999999863 22344558999999999998 44677766 599999977
Q ss_pred CCCccee-------eeecCC-----CCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCe---EEEEEeCC
Q 044075 581 AKPNFCL-------QTYTGH-----NNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGT---VQVRFQPR 645 (786)
Q Consensus 581 ~s~~~~~-------~~~~~h-----~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i---~~i~~sp~ 645 (786)
+...... ....-| --.|+++...|..+.++.++ .|+.++.||+++++..+.++++. .++.--..
T Consensus 89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~Ag-GD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~ 167 (325)
T KOG0649|consen 89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAG-GDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNA 167 (325)
T ss_pred hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEec-CCeEEEEEEecCCEEEEEEcCCcceeeeeeeccc
Confidence 5432210 011112 24588999999888888555 69999999999999999888664 44555455
Q ss_pred CCEEEEEECCCeEEEEEcCCCcEEEEEecC----------CCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEcc
Q 044075 646 LGLLLAAASENVVSIFDVETDRLTHSFKGH----------STEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSS 715 (786)
Q Consensus 646 g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h----------~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~ 715 (786)
...+++|++||++++||.++.+.+..+... ..+|-+++ -+..++++|+...+.+|.+++.++...+..
T Consensus 168 ~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala--~~edWlvCGgGp~lslwhLrsse~t~vfpi 245 (325)
T KOG0649|consen 168 NGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALA--VNEDWLVCGGGPKLSLWHLRSSESTCVFPI 245 (325)
T ss_pred CcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEe--ccCceEEecCCCceeEEeccCCCceEEEec
Confidence 678999999999999999999988877531 23455554 466778877766999999999988877754
Q ss_pred CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCC-CCEEEEEeCCCcEEEe
Q 044075 716 SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPV-TGMVASASHDKSVKIW 785 (786)
Q Consensus 716 ~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspd-g~~LaSgs~DG~I~IW 785 (786)
..++..+.|..+ .+++++..+.|.-|.+..--...+.......++..|+-. -++|-.++....+.|+
T Consensus 246 -pa~v~~v~F~~d--~vl~~G~g~~v~~~~l~Gvl~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~ 313 (325)
T KOG0649|consen 246 -PARVHLVDFVDD--CVLIGGEGNHVQSYTLNGVLQANIPVESTACYSASWQTSPIKFISIAGFSNKLHIL 313 (325)
T ss_pred -ccceeEeeeecc--eEEEeccccceeeeeeccEEEEeccCCccceeeecccCCceEEEEecccceeeeee
Confidence 477888888765 678888777899998765444344433344555555432 2355556666666665
No 186
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.68 E-value=6.7e-15 Score=149.90 Aligned_cols=235 Identities=20% Similarity=0.349 Sum_probs=167.9
Q ss_pred cceeeeeEEeecCCCCeEEEEEcC--CCCEEEEEECCCeEEEEEcC---------CCeeeeecCCCCCCeEEEEEcc--C
Q 044075 496 AFSFNEVSSIRKSSSKVTCCHFSS--DGKLLASAGHDKKVVVWNME---------NFQTECTPDDHNHIITDVRFRP--N 562 (786)
Q Consensus 496 ~~~~~~v~~l~~H~~~V~~lafSp--dg~~Lasgs~Dg~V~IWdl~---------t~~~~~~l~~h~~~V~sl~fsp--d 562 (786)
.-+|......+.|.+.|..+.|-+ -|+.+|+++.|++|.||.-. ......++....+.|++|+|.| -
T Consensus 46 s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hl 125 (361)
T KOG2445|consen 46 SGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHL 125 (361)
T ss_pred CCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhc
Confidence 447888889999999999999976 69999999999999999752 2334556777888999999999 4
Q ss_pred CCEEEEEeCCCcEEEEcCCCCccee-----eee-------cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee
Q 044075 563 STQLATSSFDKTVRIWDAAKPNFCL-----QTY-------TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA 630 (786)
Q Consensus 563 g~~Lasgs~Dg~I~VWdl~s~~~~~-----~~~-------~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~ 630 (786)
|-.||+++.||+||||+.-+..... ..+ ..+..+..|+.|+|..-
T Consensus 126 GLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~----------------------- 182 (361)
T KOG2445|consen 126 GLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRM----------------------- 182 (361)
T ss_pred ceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccc-----------------------
Confidence 6789999999999999876543211 111 12444556666654210
Q ss_pred EeecCCeEEEEEeCCCCEEEEEECC-----CeEEEEEcCCC----cEEEEEecCCCCEEEEEEcCC----CCEEEEEeCC
Q 044075 631 RISKGGTVQVRFQPRLGLLLAAASE-----NVVSIFDVETD----RLTHSFKGHSTEIHSVCWDTN----GEYLASVSQD 697 (786)
Q Consensus 631 ~~~~~~i~~i~~sp~g~~Ll~gs~d-----g~I~iwD~~t~----~~i~~l~~h~~~I~sv~~spd----g~~Lasgs~D 697 (786)
...+|++|+.+ +.++||..... ..+.++.+|..+|++|+|.|+ -..|++++.|
T Consensus 183 --------------~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kD 248 (361)
T KOG2445|consen 183 --------------HEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKD 248 (361)
T ss_pred --------------cCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecC
Confidence 01123333322 34555544332 344566689999999999996 3468888888
Q ss_pred eEEEEECCC--------------------CeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC---CeEEEE
Q 044075 698 SVRVWSLAS--------------------GECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE---NKCMTI 754 (786)
Q Consensus 698 ~I~vwDl~s--------------------~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~---~~~~~~ 754 (786)
.|+||.++. -+.+..+..|.+.|..+.|.-.|..|.+.|.||.|++|...- .+|...
T Consensus 249 gv~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~kC~sv 328 (361)
T KOG2445|consen 249 GVRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLWKCTSV 328 (361)
T ss_pred cEEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhheeeeE
Confidence 999999873 124566788999999999999999999999999999997543 345544
Q ss_pred cccCCCeEEEEEc
Q 044075 755 AAHDCVISALAQS 767 (786)
Q Consensus 755 ~~h~~~V~slafs 767 (786)
..-...|....|+
T Consensus 329 ~~~e~~~~~~~~~ 341 (361)
T KOG2445|consen 329 LKAEGSVTKPDFS 341 (361)
T ss_pred EeccCCCCCcccc
Confidence 4444445555444
No 187
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.67 E-value=8.5e-15 Score=148.03 Aligned_cols=268 Identities=15% Similarity=0.232 Sum_probs=199.1
Q ss_pred CCeEEEEEcC--C-CCEEEEEEC----CCeEEEEEcC--CCeeeeec-CCCCCCeEEEEEccCCC-----EEEEEeCCCc
Q 044075 510 SKVTCCHFSS--D-GKLLASAGH----DKKVVVWNME--NFQTECTP-DDHNHIITDVRFRPNST-----QLATSSFDKT 574 (786)
Q Consensus 510 ~~V~~lafSp--d-g~~Lasgs~----Dg~V~IWdl~--t~~~~~~l-~~h~~~V~sl~fspdg~-----~Lasgs~Dg~ 574 (786)
-.+.++.|+. + ..+||.|+. .++|.|..++ +++.+..- ..|..+++.+-|.|+.. +||+++ ..
T Consensus 45 ~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~--D~ 122 (364)
T KOG0290|consen 45 WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSS--DF 122 (364)
T ss_pred CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhccc--Ce
Confidence 3578888884 3 346888873 4667777655 33333222 47889999999999763 455554 47
Q ss_pred EEEEcCCCCcceee--------eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe------eeEeecCCeEEE
Q 044075 575 VRIWDAAKPNFCLQ--------TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS------CARISKGGTVQV 640 (786)
Q Consensus 575 I~VWdl~s~~~~~~--------~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~------~~~~~~~~i~~i 640 (786)
+|+|.+...+..+. .-..+..++++++|+.-...++.+++-|-+..|||++++. .+..+...+..+
T Consensus 123 LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DI 202 (364)
T KOG0290|consen 123 LRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDI 202 (364)
T ss_pred EEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEE
Confidence 99999874321111 1234667899999999999999999999999999999852 233455789999
Q ss_pred EEeCCC-CEEEEEECCCeEEEEEcCCCcEEEEEe---cCCCCEEEEEEcC-CCCEEEEEeCC--eEEEEECCCC-eeEEE
Q 044075 641 RFQPRL-GLLLAAASENVVSIFDVETDRLTHSFK---GHSTEIHSVCWDT-NGEYLASVSQD--SVRVWSLASG-ECIHE 712 (786)
Q Consensus 641 ~~sp~g-~~Ll~gs~dg~I~iwD~~t~~~i~~l~---~h~~~I~sv~~sp-dg~~Lasgs~D--~I~vwDl~s~-~~i~~ 712 (786)
+|...+ ..|++++.||.|++||++..+-...+. ....+...++|++ |-+|+++-..| .|.|.|++.. ..+.+
T Consensus 203 af~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~ 282 (364)
T KOG0290|consen 203 AFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVAR 282 (364)
T ss_pred EeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceeh
Confidence 998865 468888999999999999874333332 2356788999988 55788887777 8999999964 68899
Q ss_pred EccCCCceEEEEEeCCC-CEEEEEECCCeEEEEECCCCeE------EEEcccCCCeEEEEEcCC-CCEEEEEeCC
Q 044075 713 LSSSGNKFHSCIFHPSY-PTLMVIGGYQSLELWNMAENKC------MTIAAHDCVISALAQSPV-TGMVASASHD 779 (786)
Q Consensus 713 l~~~~~~I~sv~fspdg-~~L~sgs~dg~I~IwDl~~~~~------~~~~~h~~~V~slafspd-g~~LaSgs~D 779 (786)
+..|...|..++|.|.. ..|++++.|..+.|||+..-.. +....-.+.|..+.|++. ..+|+.|...
T Consensus 283 L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~~~k 357 (364)
T KOG0290|consen 283 LRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAICFGK 357 (364)
T ss_pred hhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEEecC
Confidence 99999999999999965 5788888899999999976332 222336778999999964 4577776543
No 188
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.67 E-value=9.3e-15 Score=149.72 Aligned_cols=223 Identities=19% Similarity=0.324 Sum_probs=176.5
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC---CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 505 IRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN---FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 505 l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t---~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
+..-..+|+|.+|++|+..+|++.....|.||.... .+..+++..|...|++|+|+|..+.|++|+.|..-+||...
T Consensus 6 ~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~ 85 (361)
T KOG1523|consen 6 FHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQP 85 (361)
T ss_pred eeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccC
Confidence 334557899999999999999999999999998764 46788999999999999999999999999999999999984
Q ss_pred C-Ccc-eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee-------eEeecCCeEEEEEeCCCCEEEEE
Q 044075 582 K-PNF-CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC-------ARISKGGTVQVRFQPRLGLLLAA 652 (786)
Q Consensus 582 s-~~~-~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~-------~~~~~~~i~~i~~sp~g~~Ll~g 652 (786)
. ++. ....+..+....+++.|+|.++. |++++....|.||-++..+. .+.++..+.++.|+|++-.+++|
T Consensus 86 ~~~~WkptlvLlRiNrAAt~V~WsP~enk-FAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaG 164 (361)
T KOG1523|consen 86 SGGTWKPTLVLLRINRAATCVKWSPKENK-FAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAG 164 (361)
T ss_pred CCCeeccceeEEEeccceeeEeecCcCce-EEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceeccc
Confidence 3 332 33455678889999999998764 55888889999998876443 23445778999999999999999
Q ss_pred ECCCeEEEEEcC-----C-------------CcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe-eEEE
Q 044075 653 ASENVVSIFDVE-----T-------------DRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE-CIHE 712 (786)
Q Consensus 653 s~dg~I~iwD~~-----t-------------~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~-~i~~ 712 (786)
+.|+..+||..- . +.++.++....+.|..+.|+|+|..|+-.+.| .+.+-|..... .+..
T Consensus 165 s~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~ 244 (361)
T KOG1523|consen 165 STDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQS 244 (361)
T ss_pred ccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccc
Confidence 999999988642 1 12333443467889999999999999999999 89998887654 3444
Q ss_pred EccCCCceEEEEEeCC
Q 044075 713 LSSSGNKFHSCIFHPS 728 (786)
Q Consensus 713 l~~~~~~I~sv~fspd 728 (786)
+....-+..++.|-.+
T Consensus 245 ~~~~~lP~ls~~~ise 260 (361)
T KOG1523|consen 245 VATAQLPLLSVSWISE 260 (361)
T ss_pred hhhccCCceeeEeecC
Confidence 4444466677666544
No 189
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.66 E-value=8e-16 Score=166.13 Aligned_cols=213 Identities=18% Similarity=0.320 Sum_probs=165.1
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec-CCCCCCeEEEEEcc--CCCEEEEEeCCCcEE
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP-DDHNHIITDVRFRP--NSTQLATSSFDKTVR 576 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l-~~h~~~V~sl~fsp--dg~~Lasgs~Dg~I~ 576 (786)
..-+.|.||++.|.|++|+.||.+|++|+.|-.+.|||.-..+.++.+ .+|...|.++.|.| +.+++++|..|..|+
T Consensus 41 ~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~ 120 (758)
T KOG1310|consen 41 DLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK 120 (758)
T ss_pred chhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence 445678999999999999999999999999999999999888887776 78999999999999 567899999999999
Q ss_pred EEcCCCC---------cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-------------
Q 044075 577 IWDAAKP---------NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK------------- 634 (786)
Q Consensus 577 VWdl~s~---------~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~------------- 634 (786)
|+|+... +.....+..|...|..|+..|++.+.|.++++||+|+-+|++.........
T Consensus 121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~l 200 (758)
T KOG1310|consen 121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQL 200 (758)
T ss_pred EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhh
Confidence 9999852 233456678999999999999999999999999999999998633211100
Q ss_pred CCeEEEEEeCCC-CEEEEEECCCeEEEEEcCCC--------c----------EEEEEe-cCC--------C---CEEEEE
Q 044075 635 GGTVQVRFQPRL-GLLLAAASENVVSIFDVETD--------R----------LTHSFK-GHS--------T---EIHSVC 683 (786)
Q Consensus 635 ~~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t~--------~----------~i~~l~-~h~--------~---~I~sv~ 683 (786)
-...++.++|.. .+|++|+.|-..++||.+.. . ++..+. +|. . .++-+.
T Consensus 201 ielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vt 280 (758)
T KOG1310|consen 201 IELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVT 280 (758)
T ss_pred heeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEE
Confidence 234677888865 56888999999999995321 0 122222 121 1 145678
Q ss_pred EcCCCCEEEEE-eCCeEEEEECCCCeeEEE
Q 044075 684 WDTNGEYLASV-SQDSVRVWSLASGECIHE 712 (786)
Q Consensus 684 ~spdg~~Lasg-s~D~I~vwDl~s~~~i~~ 712 (786)
|+|+|.-|++. +.+.|+++|+..++.+..
T Consensus 281 fnpNGtElLvs~~gEhVYlfdvn~~~~~~~ 310 (758)
T KOG1310|consen 281 FNPNGTELLVSWGGEHVYLFDVNEDKSPTP 310 (758)
T ss_pred ECCCCcEEEEeeCCeEEEEEeecCCCCcee
Confidence 99999766554 444999999987764433
No 190
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.66 E-value=3.4e-15 Score=156.23 Aligned_cols=221 Identities=18% Similarity=0.282 Sum_probs=168.0
Q ss_pred EeecCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcCCC-------eeeeecCCCCCCeEEEEEccC-CCEEEEEeCCCc
Q 044075 504 SIRKSSSKVTCCHFSS-DGKLLASAGHDKKVVVWNMENF-------QTECTPDDHNHIITDVRFRPN-STQLATSSFDKT 574 (786)
Q Consensus 504 ~l~~H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t~-------~~~~~l~~h~~~V~sl~fspd-g~~Lasgs~Dg~ 574 (786)
.+.+|+++|..++|+| +...||+|+.|.+|.||.+... +.+..+.+|...|-.|.|+|. .+.|++++.|.+
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 4678999999999999 6678999999999999998743 456778899999999999994 568999999999
Q ss_pred EEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC----CeEEEEEeCCCCEEE
Q 044075 575 VRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKG----GTVQVRFQPRLGLLL 650 (786)
Q Consensus 575 I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~----~i~~i~~sp~g~~Ll 650 (786)
|.+||+.+++. +..+. |...|.+++|+.+|..+ ++.+.|..|+|||.++++.+..-.. ....+.|-.++..+-
T Consensus 156 v~iWnv~tgea-li~l~-hpd~i~S~sfn~dGs~l-~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~t 232 (472)
T KOG0303|consen 156 VSIWNVGTGEA-LITLD-HPDMVYSMSFNRDGSLL-CTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFT 232 (472)
T ss_pred EEEEeccCCce-eeecC-CCCeEEEEEeccCCcee-eeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceee
Confidence 99999999885 44444 99999999999988754 5888999999999999998876532 234567888888555
Q ss_pred EEEC---CCeEEEEEcCCCcE---EEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCee-EEEEcc--CCCc
Q 044075 651 AAAS---ENVVSIFDVETDRL---THSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGEC-IHELSS--SGNK 719 (786)
Q Consensus 651 ~gs~---dg~I~iwD~~t~~~---i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~-i~~l~~--~~~~ 719 (786)
+|.+ +..+.+||....+. ...+. ....|.---|++|..+++.|+.+ .|+.|.+....+ ++.+.. ...+
T Consensus 233 TGfsr~seRq~aLwdp~nl~eP~~~~elD-tSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~f~S~ep 311 (472)
T KOG0303|consen 233 TGFSRMSERQIALWDPNNLEEPIALQELD-TSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNTFSSKEP 311 (472)
T ss_pred eccccccccceeccCcccccCcceeEEec-cCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecccccCCc
Confidence 5543 57899999876532 22333 45567667788999888877755 899999987652 222221 1234
Q ss_pred eEEEEEeCC
Q 044075 720 FHSCIFHPS 728 (786)
Q Consensus 720 I~sv~fspd 728 (786)
-..+.|-|.
T Consensus 312 QRG~g~mPK 320 (472)
T KOG0303|consen 312 QRGMGFMPK 320 (472)
T ss_pred ccccccccc
Confidence 445555554
No 191
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.64 E-value=9.3e-15 Score=160.56 Aligned_cols=240 Identities=17% Similarity=0.272 Sum_probs=187.4
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
..+.++++|.+.|.|++|+.||+.+|+|+.|..|.||+-.-...+ . ..|.+.|.|+.|+|-...|++++-. ..-+|.
T Consensus 44 ~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~L-k-YSH~D~IQCMsFNP~~h~LasCsLs-dFglWS 120 (1081)
T KOG1538|consen 44 TLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGIL-K-YSHNDAIQCMSFNPITHQLASCSLS-DFGLWS 120 (1081)
T ss_pred ccccccccccceEEEEEEccCCceeccCCCceeEEEeccccccee-e-eccCCeeeEeecCchHHHhhhcchh-hccccC
Confidence 456789999999999999999999999999999999985432222 2 2689999999999988899988763 467898
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-----CCeEEEEEeCCC-----CEE
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-----GGTVQVRFQPRL-----GLL 649 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-----~~i~~i~~sp~g-----~~L 649 (786)
.+... +...+ ....|.+++|..||.+++ .|-.+|+|.+-+-...+..++.. .++.+++|+|.. ..+
T Consensus 121 ~~qK~--V~K~k-ss~R~~~CsWtnDGqyla-lG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~ 196 (1081)
T KOG1538|consen 121 PEQKS--VSKHK-SSSRIICCSWTNDGQYLA-LGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDIL 196 (1081)
T ss_pred hhhhh--HHhhh-hheeEEEeeecCCCcEEE-EeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceE
Confidence 76543 22111 235688999998887655 78889999998776555554433 578899999864 357
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCC
Q 044075 650 LAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPS 728 (786)
Q Consensus 650 l~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspd 728 (786)
++.....++.+|.+. |+.+..-+.-.-...|+.+.++|.|+..|+.| .+.+|. +.|-.+.++...+..|+++...|+
T Consensus 197 aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PN 274 (1081)
T KOG1538|consen 197 AVADWGQTLSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPN 274 (1081)
T ss_pred EEEeccceeEEEEec-ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccC
Confidence 777777788877775 44444333344456789999999999999999 777775 667777788778899999999999
Q ss_pred CCEEEEEECCCeEEEEECCC
Q 044075 729 YPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 729 g~~L~sgs~dg~I~IwDl~~ 748 (786)
+.+++.|+.||+|..|++..
T Consensus 275 sQ~v~~GCqDGTiACyNl~f 294 (1081)
T KOG1538|consen 275 SQYVVVGCQDGTIACYNLIF 294 (1081)
T ss_pred CceEEEEEccCeeehhhhHH
Confidence 99999999999999998753
No 192
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.64 E-value=1.3e-14 Score=165.21 Aligned_cols=242 Identities=19% Similarity=0.263 Sum_probs=186.4
Q ss_pred CCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcCCCee--ee----ecCCCCCCeEEEEEccCC--CEEEEEeCCCcEEEE
Q 044075 508 SSSKVTCCHFSS-DGKLLASAGHDKKVVVWNMENFQT--EC----TPDDHNHIITDVRFRPNS--TQLATSSFDKTVRIW 578 (786)
Q Consensus 508 H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t~~~--~~----~l~~h~~~V~sl~fspdg--~~Lasgs~Dg~I~VW 578 (786)
....|+|++|+| +..+||.|+.+|.|.+||+..+.. .. ....|..+|+.+.|..+. .-|++++.||.|..|
T Consensus 241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W 320 (555)
T KOG1587|consen 241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSW 320 (555)
T ss_pred cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeee
Confidence 457899999999 677888999999999999986554 22 225688999999998754 449999999999999
Q ss_pred cCCCCcceeee-----ec------CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC---CCe--------eeEeecCC
Q 044075 579 DAAKPNFCLQT-----YT------GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS---QYS--------CARISKGG 636 (786)
Q Consensus 579 dl~s~~~~~~~-----~~------~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~---~~~--------~~~~~~~~ 636 (786)
+++.-..+... .. .-...+++++|.+.....|+.|+.+|.|..-+.. ... ....+.+.
T Consensus 321 ~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~ 400 (555)
T KOG1587|consen 321 DTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGP 400 (555)
T ss_pred eccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcc
Confidence 88653321111 11 1234689999999999999999999999873332 221 11223477
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEEEEcC-CCcEEEEEecCCCCEEEEEEcCCCC-EEEEEeCC-eEEEEECCCC--eeEE
Q 044075 637 TVQVRFQPRLGLLLAAASENVVSIFDVE-TDRLTHSFKGHSTEIHSVCWDTNGE-YLASVSQD-SVRVWSLASG--ECIH 711 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~dg~I~iwD~~-t~~~i~~l~~h~~~I~sv~~spdg~-~Lasgs~D-~I~vwDl~s~--~~i~ 711 (786)
+..+.++|-+..++..+.|.+|+||... ...++..+..+...|++++|||..- .|+++..+ .|.|||+... .++.
T Consensus 401 v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~ 480 (555)
T KOG1587|consen 401 VYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVL 480 (555)
T ss_pred eEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcc
Confidence 8899999988877777779999999998 6678888888888899999999765 55556656 9999999754 4555
Q ss_pred EEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC
Q 044075 712 ELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 712 ~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~ 749 (786)
+........+.+.|++.++.|++|...|.+++|++...
T Consensus 481 s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~ 518 (555)
T KOG1587|consen 481 SQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSES 518 (555)
T ss_pred cccccccccceeecCCCCcEEEEecCCCcEEEEEcCch
Confidence 55555566677888888999999999999999999653
No 193
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.64 E-value=1.1e-13 Score=157.17 Aligned_cols=233 Identities=13% Similarity=0.158 Sum_probs=170.9
Q ss_pred CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeC---CCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCC
Q 044075 531 KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSF---DKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKN 607 (786)
Q Consensus 531 g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~---Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~ 607 (786)
..|.+||.+.... ..+..+...+.+.+|+|||+.|+..+. +..|.+|++.+++ ...+....+.+..+.|+|+|+
T Consensus 179 ~~l~~~d~dg~~~-~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~--~~~l~~~~~~~~~~~~SPDG~ 255 (429)
T PRK03629 179 YELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--VRQVASFPRHNGAPAFSPDGS 255 (429)
T ss_pred eeEEEEcCCCCCC-EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC--eEEccCCCCCcCCeEECCCCC
Confidence 3699999875544 334456678999999999998887653 3579999998765 223333334456789999999
Q ss_pred eEEEEEcCCC--cEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECC-C--eEEEEEcCCCcEEEEEecCCCCEE
Q 044075 608 DLFCSCDGNS--EIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASE-N--VVSIFDVETDRLTHSFKGHSTEIH 680 (786)
Q Consensus 608 ~ll~sgs~Dg--~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~d-g--~I~iwD~~t~~~i~~l~~h~~~I~ 680 (786)
.++++.+.+| .|++||+.+++...... ..+....|+|+++.|+.++.+ + .|+++|+.++... .+..+...+.
T Consensus 256 ~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~ 334 (429)
T PRK03629 256 KLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQ 334 (429)
T ss_pred EEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCCCCcc
Confidence 9987766565 58999998877665544 345678999999998887764 3 5666677776543 3333444566
Q ss_pred EEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCC---eEEEEECCCCeEEE
Q 044075 681 SVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ---SLELWNMAENKCMT 753 (786)
Q Consensus 681 sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg---~I~IwDl~~~~~~~ 753 (786)
+.+|+|||++|+..+.+ .|.+||+.+++.. .+... .......|+|||++|+.++.++ .++++++.......
T Consensus 335 ~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~~~~ 412 (429)
T PRK03629 335 DADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRFKAR 412 (429)
T ss_pred CEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCCeEE
Confidence 78999999999876543 5889999887643 33322 2345678999999999999876 47888987777777
Q ss_pred EcccCCCeEEEEEcCC
Q 044075 754 IAAHDCVISALAQSPV 769 (786)
Q Consensus 754 ~~~h~~~V~slafspd 769 (786)
+..|.+.+...+|+|-
T Consensus 413 l~~~~~~~~~p~Wsp~ 428 (429)
T PRK03629 413 LPATDGQVKFPAWSPY 428 (429)
T ss_pred CccCCCCcCCcccCCC
Confidence 8888899999999973
No 194
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.64 E-value=3.2e-13 Score=149.58 Aligned_cols=285 Identities=17% Similarity=0.186 Sum_probs=188.9
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe-CCCcEEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS-FDKTVRI 577 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~I~V 577 (786)
.+.+.++......-..+.|+|||+++++++.||.|.++|+.+.+.+.++.... ...++++++||+++++++ .++.|.|
T Consensus 26 ~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i~~s~DG~~~~v~n~~~~~v~v 104 (369)
T PF02239_consen 26 NKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGIAVSPDGKYVYVANYEPGTVSV 104 (369)
T ss_dssp -SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEEEE--TTTEEEEEEEETTEEEE
T ss_pred CeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceEEEcCCCCEEEEEecCCCceeE
Confidence 45666776654444557899999999999999999999999999999986644 467899999999998776 4899999
Q ss_pred EcCCCCcceeeeecC-------CCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE--eec--CCeEEEEEeCCC
Q 044075 578 WDAAKPNFCLQTYTG-------HNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR--ISK--GGTVQVRFQPRL 646 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~-------h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~--~~~--~~i~~i~~sp~g 646 (786)
+|.++.+. +..+.. ....+..|..+|....++++--+.+.|.+.|....+... ... .......|+|++
T Consensus 105 ~D~~tle~-v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdg 183 (369)
T PF02239_consen 105 IDAETLEP-VKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDG 183 (369)
T ss_dssp EETTT--E-EEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTS
T ss_pred eccccccc-eeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCccc
Confidence 99998774 443321 234678888888888777676767899999987654332 222 345678999999
Q ss_pred CEEEEEEC-CCeEEEEEcCCCcEEEEEec----CCCCEEEE-------EEcC--CCCEE-EEEeCCeEEEEECCCCeeEE
Q 044075 647 GLLLAAAS-ENVVSIFDVETDRLTHSFKG----HSTEIHSV-------CWDT--NGEYL-ASVSQDSVRVWSLASGECIH 711 (786)
Q Consensus 647 ~~Ll~gs~-dg~I~iwD~~t~~~i~~l~~----h~~~I~sv-------~~sp--dg~~L-asgs~D~I~vwDl~s~~~i~ 711 (786)
++++++.. ++.|.++|.++++.+..+.. |..++..+ .|.. .+... ...+.+.+.+||..+.+.+.
T Consensus 184 ry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~ 263 (369)
T PF02239_consen 184 RYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVK 263 (369)
T ss_dssp SEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEE
T ss_pred ceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEE
Confidence 99888654 68999999999988776642 33333332 2221 22222 34455567789999999999
Q ss_pred EEccCCCceEEEEEeCCCCEEEEE---EC-CCeEEEEECCCCeEEEEccc--CCCeEEEEEcCCCCEEEEEeCCC--cEE
Q 044075 712 ELSSSGNKFHSCIFHPSYPTLMVI---GG-YQSLELWNMAENKCMTIAAH--DCVISALAQSPVTGMVASASHDK--SVK 783 (786)
Q Consensus 712 ~l~~~~~~I~sv~fspdg~~L~sg---s~-dg~I~IwDl~~~~~~~~~~h--~~~V~slafspdg~~LaSgs~DG--~I~ 783 (786)
++.....+ ..+..||+++++++. +. .+.|.++|..+.+....... ...+..+.|++||+.+..+..|+ .|.
T Consensus 264 ~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~ 342 (369)
T PF02239_consen 264 TIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIV 342 (369)
T ss_dssp EEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEE
T ss_pred EEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEE
Confidence 99887777 788899999999998 33 36999999999877644332 33599999999999766655543 599
Q ss_pred EeC
Q 044075 784 IWK 786 (786)
Q Consensus 784 IWd 786 (786)
|||
T Consensus 343 v~D 345 (369)
T PF02239_consen 343 VYD 345 (369)
T ss_dssp EEE
T ss_pred EEE
Confidence 886
No 195
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.64 E-value=2.6e-14 Score=148.93 Aligned_cols=287 Identities=15% Similarity=0.186 Sum_probs=215.6
Q ss_pred ccccccccccCC-CcceeEeccCCCCceeeeccccCCCcccccccccceeeeeEEee-cCCCCeEEEEEcCCCCEEEEEE
Q 044075 451 MEHFGDIGSLDD-NVESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIR-KSSSKVTCCHFSSDGKLLASAG 528 (786)
Q Consensus 451 ~~~~~~v~sld~-~~~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~-~H~~~V~~lafSpdg~~Lasgs 528 (786)
..|++-+..+.+ ++..|+....+|-+.++|....... .. .-+++.... .|.+.|.|++|.....+|++|+
T Consensus 53 ~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~---~k-----~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~ 124 (609)
T KOG4227|consen 53 REHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMV---RK-----TPKPIGVMEHPHRSNIFSLEFDLENRFLYSGE 124 (609)
T ss_pred hhhccccceeeeccCCeEEeecCCcceeeeechHHHHh---hc-----CCCCceeccCccccceEEEEEccCCeeEecCC
Confidence 456666666655 4578888888888888887553211 11 123333333 3668999999999999999999
Q ss_pred CCCeEEEEEcCCCeeeeecCC--CCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee--eeecCCCCCeEEEEEec
Q 044075 529 HDKKVVVWNMENFQTECTPDD--HNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL--QTYTGHNNHVMSLDFHP 604 (786)
Q Consensus 529 ~Dg~V~IWdl~t~~~~~~l~~--h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~--~~~~~h~~~V~sl~~sp 604 (786)
.+++|.+.|+++.+.+..+.. ..+.|+.+..+|..+.|++.+.++.|.+||.+...... ............+.|+|
T Consensus 125 ~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P 204 (609)
T KOG4227|consen 125 RWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHP 204 (609)
T ss_pred CcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecC
Confidence 999999999999888877743 33589999999999999999999999999998654222 22333456788999999
Q ss_pred CCCeEEEEEcCCCcEEEEeCCCCeeeE-------eec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcE-EEEEe
Q 044075 605 KKNDLFCSCDGNSEIRFWNLSQYSCAR-------ISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRL-THSFK 673 (786)
Q Consensus 605 ~g~~ll~sgs~Dg~I~iwDl~~~~~~~-------~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~-i~~l~ 673 (786)
....|+++.+..+.+-+||++...... .+. ..-..+.|+|.|..|++.-....-.+||+.+.++ +..+.
T Consensus 205 ~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D 284 (609)
T KOG4227|consen 205 ETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSD 284 (609)
T ss_pred CCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEecc
Confidence 999999999999999999998643211 111 1224578999999999988877778889887543 33443
Q ss_pred cCC-------CCEEEEEEcCCCCEEEEEeCC-eEEEEECCC----------C-------------eeEEEEccCCCceEE
Q 044075 674 GHS-------TEIHSVCWDTNGEYLASVSQD-SVRVWSLAS----------G-------------ECIHELSSSGNKFHS 722 (786)
Q Consensus 674 ~h~-------~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s----------~-------------~~i~~l~~~~~~I~s 722 (786)
|. ..|.++||..|-. +++|+++ .|++|.+.. | +.+..+++|...+..
T Consensus 285 -~N~~GY~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQ 362 (609)
T KOG4227|consen 285 -HNPNGYCNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQ 362 (609)
T ss_pred -CCCCcceeeeeeeeeeeeccee-eeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccc
Confidence 32 3466788865544 8899999 999998752 1 134567889999999
Q ss_pred EEEeCCCCEEEEEECCCeEEEEECC
Q 044075 723 CIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 723 v~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
+.|+|....|++.+-.+.++||.-.
T Consensus 363 VRF~~H~~~l~SSGVE~~~KlWS~~ 387 (609)
T KOG4227|consen 363 VRFSQHNNLLVSSGVENSFKLWSDH 387 (609)
T ss_pred eeecCCcceEeccchhhheeccccc
Confidence 9999999999999999999999643
No 196
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=2.1e-14 Score=163.02 Aligned_cols=218 Identities=17% Similarity=0.195 Sum_probs=160.4
Q ss_pred eEEeecCCCCeEEEEEcCCCCEEEEEECC---CeEEEEEcCCCee--eeecCCCCCCeEEEEEccCCCEEEEEe-CCCcE
Q 044075 502 VSSIRKSSSKVTCCHFSSDGKLLASAGHD---KKVVVWNMENFQT--ECTPDDHNHIITDVRFRPNSTQLATSS-FDKTV 575 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpdg~~Lasgs~D---g~V~IWdl~t~~~--~~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~I 575 (786)
...+..|...|.+.+|||||+.|+.++.+ ..|++||+.+++. +..+.+| ...++|+|||+.|++++ .+|.+
T Consensus 196 ~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~ 272 (429)
T PRK01742 196 QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGVL 272 (429)
T ss_pred ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEEecCCcE
Confidence 34566788899999999999999987654 3699999988754 3333343 44689999999888765 68876
Q ss_pred EEE--cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC--CeeeEeecCCeEEEEEeCCCCEEEE
Q 044075 576 RIW--DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ--YSCARISKGGTVQVRFQPRLGLLLA 651 (786)
Q Consensus 576 ~VW--dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~--~~~~~~~~~~i~~i~~sp~g~~Ll~ 651 (786)
.|| |+.++. ...+..+...+.+..|+|++..++++++.++...+|++.. .......... ....|+|++++|++
T Consensus 273 ~Iy~~d~~~~~--~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~~~-~~~~~SpDG~~ia~ 349 (429)
T PRK01742 273 NIYVMGANGGT--PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGGRG-YSAQISADGKTLVM 349 (429)
T ss_pred EEEEEECCCCC--eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecCCC-CCccCCCCCCEEEE
Confidence 665 555443 4556667777889999999999888887788888887643 2222221112 45789999999988
Q ss_pred EECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEEC--CCCeeEEEEccCCCceEEEEEeCC
Q 044075 652 AASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSL--ASGECIHELSSSGNKFHSCIFHPS 728 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl--~s~~~i~~l~~~~~~I~sv~fspd 728 (786)
++.++ +.+||+.+++.......+ ...++.|+|+|++|+.++.+ .+.+|++ .++..+..+..+.+.+..++|+|-
T Consensus 350 ~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 350 INGDN-VVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred EcCCC-EEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence 87754 566999988654333222 34567899999999998877 7777765 357788888888888888999985
No 197
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.63 E-value=1e-13 Score=143.89 Aligned_cols=273 Identities=17% Similarity=0.264 Sum_probs=187.8
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC-CCCCCeEEEEEccC-CCEEEEEeCCCcEEEEcCCCCcce
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD-DHNHIITDVRFRPN-STQLATSSFDKTVRIWDAAKPNFC 586 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~-~h~~~V~sl~fspd-g~~Lasgs~Dg~I~VWdl~s~~~~ 586 (786)
...+..++|++.--.+|++..|-.|+||+-+. +....++ .....|+|++|-|. .+.|++|+.. -|.||........
T Consensus 98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~-gIciW~~s~tln~ 175 (445)
T KOG2139|consen 98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNA 175 (445)
T ss_pred hcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecc-eeEEEEcCccccc
Confidence 44688899999766788999999999999776 4444443 33467999999994 4577888764 5999976532211
Q ss_pred -------------eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEE
Q 044075 587 -------------LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLL 650 (786)
Q Consensus 587 -------------~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll 650 (786)
+....+| .+|+++.|.++|..++-++-.|..|.|||.+++.++.... +++.-+.|+||+.+|+
T Consensus 176 ~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lf 254 (445)
T KOG2139|consen 176 NRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLF 254 (445)
T ss_pred ccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEE
Confidence 1123345 6899999999999888666678999999999988776552 6778899999999999
Q ss_pred EEECCCeEEEEEc-CCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECC----CCe-----------eEEEEc
Q 044075 651 AAASENVVSIFDV-ETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLA----SGE-----------CIHELS 714 (786)
Q Consensus 651 ~gs~dg~I~iwD~-~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~----s~~-----------~i~~l~ 714 (786)
+++-|+..++|.. ++....+-.. ..+.|...+|+|+|++|...+...-++|.+. ... .+..+.
T Consensus 255 aAt~davfrlw~e~q~wt~erw~l-gsgrvqtacWspcGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~ 333 (445)
T KOG2139|consen 255 AATCDAVFRLWQENQSWTKERWIL-GSGRVQTACWSPCGSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQ 333 (445)
T ss_pred Eecccceeeeehhcccceecceec-cCCceeeeeecCCCCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeeccch
Confidence 9999999999954 4434333333 3458999999999998876666543444332 110 111110
Q ss_pred -----c----CCCceEEEEEeCCCCEEEEEECCC--------eEEEEECCCCeEEEEc--c--cCCCeEEEEEcC---CC
Q 044075 715 -----S----SGNKFHSCIFHPSYPTLMVIGGYQ--------SLELWNMAENKCMTIA--A--HDCVISALAQSP---VT 770 (786)
Q Consensus 715 -----~----~~~~I~sv~fspdg~~L~sgs~dg--------~I~IwDl~~~~~~~~~--~--h~~~V~slafsp---dg 770 (786)
. ..+++.+++|+|.|.++++.-..+ .|.+||.+....+.+. + ....-..++|+| ++
T Consensus 334 e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~g 413 (445)
T KOG2139|consen 334 EVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNEG 413 (445)
T ss_pred hhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeeecccCC
Confidence 1 146788999999999999987554 4677888776555333 1 111244455554 34
Q ss_pred CEEEEEeCCCcEEEe
Q 044075 771 GMVASASHDKSVKIW 785 (786)
Q Consensus 771 ~~LaSgs~DG~I~IW 785 (786)
.+|..|=..|.|.-|
T Consensus 414 ~lLsiaWsTGriq~y 428 (445)
T KOG2139|consen 414 RLLSIAWSTGRIQRY 428 (445)
T ss_pred cEEEEEeccCceEee
Confidence 455555555665443
No 198
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.63 E-value=1.1e-15 Score=162.82 Aligned_cols=262 Identities=16% Similarity=0.245 Sum_probs=211.4
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
-.-..+.|+.+|++|+.|+..|.|-.+|..+.+....+.. ...|.++.|..+..+||++- ...++|||-... .++.
T Consensus 130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v-~Etv~Dv~~LHneq~~AVAQ-K~y~yvYD~~Gt--ElHC 205 (545)
T KOG1272|consen 130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV-METVRDVTFLHNEQFFAVAQ-KKYVYVYDNNGT--ELHC 205 (545)
T ss_pred cCCeeeeecCCccEEEecCCccceeeeecccceeeeeeeh-hhhhhhhhhhcchHHHHhhh-hceEEEecCCCc--EEee
Confidence 3467889999999999999999999999999998888754 34699999998888888776 568999996543 3666
Q ss_pred ecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC
Q 044075 590 YTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETD 666 (786)
Q Consensus 590 ~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~ 666 (786)
+..| ..|..+.|.|. .+|+++++..|.++.-|+.+++.+..+. +.+..++-+|.+..+-+|...|+|.+|.....
T Consensus 206 lk~~-~~v~rLeFLPy-HfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~sk 283 (545)
T KOG1272|consen 206 LKRH-IRVARLEFLPY-HFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSK 283 (545)
T ss_pred hhhc-Cchhhhcccch-hheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCc
Confidence 6655 56899999986 6788899999999999999998876554 67778888999999999999999999999999
Q ss_pred cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEE
Q 044075 667 RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWN 745 (786)
Q Consensus 667 ~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwD 745 (786)
+++..+..|.++|.+|++.++|.|+++.+.| .++|||++....+.++.. ..+...++||..| +++.+....|.||.
T Consensus 284 ePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkg--lLA~~~G~~v~iw~ 360 (545)
T KOG1272|consen 284 EPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKG--LLALSYGDHVQIWK 360 (545)
T ss_pred chHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCcccccccccc--ceeeecCCeeeeeh
Confidence 9988888899999999999999999999999 999999999887777765 4567777887664 45555555899994
Q ss_pred -CCCCe-E--EEEccc--CCCeEEEEEcCCCCEEEEEeCCC
Q 044075 746 -MAENK-C--MTIAAH--DCVISALAQSPVTGMVASASHDK 780 (786)
Q Consensus 746 -l~~~~-~--~~~~~h--~~~V~slafspdg~~LaSgs~DG 780 (786)
.-.+. + .....| .+.|.+|.|+|-..+|-.|-..|
T Consensus 361 d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G 401 (545)
T KOG1272|consen 361 DALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGG 401 (545)
T ss_pred hhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCC
Confidence 32211 1 122223 45899999999777776665544
No 199
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.63 E-value=1.4e-13 Score=143.56 Aligned_cols=228 Identities=16% Similarity=0.247 Sum_probs=172.8
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC--CcEEEEeCCCCe
Q 044075 551 NHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN--SEIRFWNLSQYS 628 (786)
Q Consensus 551 ~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D--g~I~iwDl~~~~ 628 (786)
...+..+.|+.+...|..|+.|| .++|+.+....+.... .....|.-+-|+ ..|++..+.+ ..+++++++...
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~-~~~~~IvEmLFS---SSLvaiV~~~qpr~Lkv~~~Kk~~ 79 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKD-TEGVSIVEMLFS---SSLVAIVSIKQPRKLKVVHFKKKT 79 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhccc-CCCeEEEEeecc---cceeEEEecCCCceEEEEEcccCc
Confidence 34577788999998999999887 6788776654322211 123345556665 2344444433 458999998877
Q ss_pred eeEe--ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec---CCCCEEEEEEcCCCCEEEEEeC-C--eEE
Q 044075 629 CARI--SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG---HSTEIHSVCWDTNGEYLASVSQ-D--SVR 700 (786)
Q Consensus 629 ~~~~--~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~---h~~~I~sv~~spdg~~Lasgs~-D--~I~ 700 (786)
.+.. +...+.++.++. +.|+++-.+. |+|||+++.++++++.. +...+.++.+++.+.|++.-+. + .|.
T Consensus 80 ~ICe~~fpt~IL~VrmNr--~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~ 156 (391)
T KOG2110|consen 80 TICEIFFPTSILAVRMNR--KRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVV 156 (391)
T ss_pred eEEEEecCCceEEEEEcc--ceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEE
Confidence 6554 446666776654 4566666654 99999999999988764 4455667777777778887543 3 799
Q ss_pred EEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCC-eEEEEECCCCeEEEE-cc--cCCCeEEEEEcCCCCEEEEE
Q 044075 701 VWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ-SLELWNMAENKCMTI-AA--HDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 701 vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg-~I~IwDl~~~~~~~~-~~--h~~~V~slafspdg~~LaSg 776 (786)
|||+.+-+.+..+..|.+.+.+++|+++|.+|++++..| .||||.+.++..+.. .. -...|.+|+|+|++.+|++.
T Consensus 157 l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~s 236 (391)
T KOG2110|consen 157 LFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAAS 236 (391)
T ss_pred EEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEe
Confidence 999999999999999999999999999999999999999 579999999987733 22 24568999999999999999
Q ss_pred eCCCcEEEeC
Q 044075 777 SHDKSVKIWK 786 (786)
Q Consensus 777 s~DG~I~IWd 786 (786)
|..++|+||+
T Consensus 237 S~TeTVHiFK 246 (391)
T KOG2110|consen 237 SNTETVHIFK 246 (391)
T ss_pred cCCCeEEEEE
Confidence 9999999985
No 200
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.62 E-value=3.7e-14 Score=145.36 Aligned_cols=268 Identities=16% Similarity=0.246 Sum_probs=195.1
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEE-eCCCcEEEEcCCCCcceeeeecC
Q 044075 514 CCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATS-SFDKTVRIWDAAKPNFCLQTYTG 592 (786)
Q Consensus 514 ~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasg-s~Dg~I~VWdl~s~~~~~~~~~~ 592 (786)
-++|||+|+++|+++.- .+.|-|.++.+....+.. -..|.-+.|..|..+++++ ..|+.|.+|++...+. ...+..
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~c-ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew-~ckIde 89 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLC-LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEW-YCKIDE 89 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHH-HHHhhheeeeccceeeeeeeeccceEEEEEeeccee-EEEecc
Confidence 46799999999999754 888999988877665543 3457788999887766554 5688999999998885 444555
Q ss_pred CCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe--ecCCeEEEEEeCCCCEEEEEECC---------------
Q 044075 593 HNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI--SKGGTVQVRFQPRLGLLLAAASE--------------- 655 (786)
Q Consensus 593 h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~--~~~~i~~i~~sp~g~~Ll~gs~d--------------- 655 (786)
....+.+++|+|+|++++.+..-+-.|.+|.+.+.+.... .+..+..++|+++|++.+..+..
T Consensus 90 g~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ 169 (447)
T KOG4497|consen 90 GQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWI 169 (447)
T ss_pred CCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHH
Confidence 6678999999999999999999999999999998776543 34556778888888776665531
Q ss_pred ---------------------CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEE--
Q 044075 656 ---------------------NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIH-- 711 (786)
Q Consensus 656 ---------------------g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~-- 711 (786)
+.+.+||.--.-.+..++ ..-.+..+.|+|.+.+|++|+.| .++|.+--+.+.+.
T Consensus 170 ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe-~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~ef 248 (447)
T KOG4497|consen 170 LLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYE-RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEF 248 (447)
T ss_pred HHHhcCCCcccccCceECCCCcEEEEecchhhheeeeee-eccceeEEEeccccceEEeeccchhhhhhceeeeeehhhh
Confidence 123344432221222121 33568899999999999999999 77775432211110
Q ss_pred ----------------------------------------------------------EEcc------CCCceEEEEEeC
Q 044075 712 ----------------------------------------------------------ELSS------SGNKFHSCIFHP 727 (786)
Q Consensus 712 ----------------------------------------------------------~l~~------~~~~I~sv~fsp 727 (786)
.++. ..-.+.-++|++
T Consensus 249 lhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~ 328 (447)
T KOG4497|consen 249 LHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSC 328 (447)
T ss_pred ccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecC
Confidence 0110 012245688999
Q ss_pred CCCEEEEEECC--CeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 728 SYPTLMVIGGY--QSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 728 dg~~L~sgs~d--g~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
|..++++-... +.+.+||+...+...+.....+|.+..|+|....|+.+.....+.+|
T Consensus 329 Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~vctg~srLY~W 388 (447)
T KOG4497|consen 329 DSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFW 388 (447)
T ss_pred CceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEEEcCCceEEEE
Confidence 98888776554 58999999998888777778899999999999888888777678777
No 201
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.61 E-value=1.5e-14 Score=146.11 Aligned_cols=210 Identities=23% Similarity=0.442 Sum_probs=164.1
Q ss_pred cccceeeeeEEee-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCee-eeec-----CCCCCCeEEEEEcc--CCC
Q 044075 494 SKAFSFNEVSSIR-KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQT-ECTP-----DDHNHIITDVRFRP--NST 564 (786)
Q Consensus 494 ~~~~~~~~v~~l~-~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~-~~~l-----~~h~~~V~sl~fsp--dg~ 564 (786)
+...+++.+..+. .+-++|.|+.|.|++..||+-. |..|.+|++.+... +..+ .+|....++-+|+| +++
T Consensus 107 S~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgn 185 (370)
T KOG1007|consen 107 SNSSTLECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGN 185 (370)
T ss_pred cccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccc
Confidence 5556788888888 5777999999999999998875 88999999987665 3333 23566788899999 777
Q ss_pred EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe-eeEee---cCCeEEE
Q 044075 565 QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS-CARIS---KGGTVQV 640 (786)
Q Consensus 565 ~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~-~~~~~---~~~i~~i 640 (786)
.+++.+ |+++..||+++......+-.+|...|..++|+|+..+++++|+.||.|++||.+..+ .+... ...+.++
T Consensus 186 qv~tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~V 264 (370)
T KOG1007|consen 186 QVATTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAV 264 (370)
T ss_pred eEEEeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEE
Confidence 777765 799999999988766667778999999999999999999999999999999998754 33333 3557889
Q ss_pred EEeCCC-CEEEEEECCCeEEEEEcCCC-----------------------------cEEEEEecCCCCEEEEEEcCCCC-
Q 044075 641 RFQPRL-GLLLAAASENVVSIFDVETD-----------------------------RLTHSFKGHSTEIHSVCWDTNGE- 689 (786)
Q Consensus 641 ~~sp~g-~~Ll~gs~dg~I~iwD~~t~-----------------------------~~i~~l~~h~~~I~sv~~spdg~- 689 (786)
.|+|.. ..+++++.|..|.+|....- ..+.++..|...|.+++|+.-..
T Consensus 265 Rfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPW 344 (370)
T KOG1007|consen 265 RFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPW 344 (370)
T ss_pred EecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCe
Confidence 999865 46788888999998854311 12345667999999999987554
Q ss_pred EEEEEeCC-eEEEEECC
Q 044075 690 YLASVSQD-SVRVWSLA 705 (786)
Q Consensus 690 ~Lasgs~D-~I~vwDl~ 705 (786)
+|++-+.| .+.|=.+.
T Consensus 345 iFASLSYDGRviIs~V~ 361 (370)
T KOG1007|consen 345 IFASLSYDGRVIISSVP 361 (370)
T ss_pred eEEEeccCceEEeecCC
Confidence 56777888 77665543
No 202
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.61 E-value=2e-14 Score=148.35 Aligned_cols=248 Identities=13% Similarity=0.207 Sum_probs=179.2
Q ss_pred eeeEEeecCCCCeEEEEEcC--CCCEEEEEECCCeEEEEEcCCCeeeeec--CCCC-CCeEEEEEccCCCEEEEEeC---
Q 044075 500 NEVSSIRKSSSKVTCCHFSS--DGKLLASAGHDKKVVVWNMENFQTECTP--DDHN-HIITDVRFRPNSTQLATSSF--- 571 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSp--dg~~Lasgs~Dg~V~IWdl~t~~~~~~l--~~h~-~~V~sl~fspdg~~Lasgs~--- 571 (786)
..+..+++|...+..+.|.. ....+.+|+.||+|++||+........+ ..+. .+..|++.+.+++++++|..
T Consensus 61 ~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~ 140 (376)
T KOG1188|consen 61 QLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTR 140 (376)
T ss_pred hhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEecccccc
Confidence 45567788888888999977 4567899999999999999976554443 4555 46677777777888888754
Q ss_pred -CCcEEEEcCCCCcc-eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee----eEeec--CCeEEEEEe
Q 044075 572 -DKTVRIWDAAKPNF-CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC----ARISK--GGTVQVRFQ 643 (786)
Q Consensus 572 -Dg~I~VWdl~s~~~-~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~----~~~~~--~~i~~i~~s 643 (786)
|-.|.+||++.... +......|...|+++.|+|....++++|+.||.|.+||++.... +.+++ ..|..+.|.
T Consensus 141 s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~ 220 (376)
T KOG1188|consen 141 SDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWL 220 (376)
T ss_pred CceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeee
Confidence 67899999998776 34456689999999999999999999999999999999986532 22222 447788887
Q ss_pred CCC-CEEEEEECCCeEEEEEcCCCcEEEEEecC------------CCCEEEEEEcCCCCEEEEEeCC--eEEEE---ECC
Q 044075 644 PRL-GLLLAAASENVVSIFDVETDRLTHSFKGH------------STEIHSVCWDTNGEYLASVSQD--SVRVW---SLA 705 (786)
Q Consensus 644 p~g-~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h------------~~~I~sv~~spdg~~Lasgs~D--~I~vw---Dl~ 705 (786)
.++ +.+.+.+......+|+++.+.....+... ...+.......+...++.++.+ +..++ |..
T Consensus 221 ~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~ 300 (376)
T KOG1188|consen 221 SKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTS 300 (376)
T ss_pred cCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEeccccCceeEEEeeecc
Confidence 766 56889999999999999988755444321 0111111112244455555443 44443 333
Q ss_pred CC---eeEEEEcc-CCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 706 SG---ECIHELSS-SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 706 s~---~~i~~l~~-~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
++ +.+..+.+ |...|+++.|...+..+++||.||.+.+|...
T Consensus 301 s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~ 346 (376)
T KOG1188|consen 301 SGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVE 346 (376)
T ss_pred cccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecC
Confidence 33 34445555 55668888999889999999999999999853
No 203
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.61 E-value=1.2e-14 Score=154.02 Aligned_cols=191 Identities=24% Similarity=0.331 Sum_probs=152.5
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeec-
Q 044075 513 TCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYT- 591 (786)
Q Consensus 513 ~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~- 591 (786)
.+++|+.+|..|++|+.||++|||+..+...+.....|...|.++.|+||++.|++-+.| ..+||+++++.. +....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~-~a~~t~ 225 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAA-LARKTP 225 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCch-hhhcCC
Confidence 889999999999999999999999999988888889999999999999999999999999 899999998853 33222
Q ss_pred -CCCCCeEEEEEecCC---Ce-EEEEEcCCCcEEEEeCCCCee---eEe-----ecCCeEEEEEeCCCCEEEEEECCCeE
Q 044075 592 -GHNNHVMSLDFHPKK---ND-LFCSCDGNSEIRFWNLSQYSC---ARI-----SKGGTVQVRFQPRLGLLLAAASENVV 658 (786)
Q Consensus 592 -~h~~~V~sl~~sp~g---~~-ll~sgs~Dg~I~iwDl~~~~~---~~~-----~~~~i~~i~~sp~g~~Ll~gs~dg~I 658 (786)
.....+..+.|..++ .. +++.-...+.|+.||+...+- .+. ....+.+++++++|++++.|+.||.|
T Consensus 226 ~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsV 305 (398)
T KOG0771|consen 226 FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSV 305 (398)
T ss_pred cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcE
Confidence 233455667777554 22 333334456677776653222 111 12578999999999999999999999
Q ss_pred EEEEcCCCcEEEEEe-cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECC
Q 044075 659 SIFDVETDRLTHSFK-GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLA 705 (786)
Q Consensus 659 ~iwD~~t~~~i~~l~-~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~ 705 (786)
.|++..+.+.+..++ .|...|+.+.|+|+.+++++.+.+ .+.|..+.
T Consensus 306 ai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 306 AIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA 354 (398)
T ss_pred EEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence 999999887776665 599999999999999999998888 77776554
No 204
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=2.5e-13 Score=154.53 Aligned_cols=232 Identities=15% Similarity=0.141 Sum_probs=169.0
Q ss_pred CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC---CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCC
Q 044075 531 KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFD---KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKN 607 (786)
Q Consensus 531 g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D---g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~ 607 (786)
..|.+||... .....+..+...+.+.+|+||++.|+.++.+ ..|++||+.++.. ..+..+.+...++.|+|+++
T Consensus 184 ~~l~i~D~~g-~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~--~~l~~~~g~~~~~~~SpDG~ 260 (433)
T PRK04922 184 YALQVADSDG-YNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQR--ELVASFRGINGAPSFSPDGR 260 (433)
T ss_pred EEEEEECCCC-CCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCE--EEeccCCCCccCceECCCCC
Confidence 4689999864 4445566677789999999999999887743 4699999987652 33334445566889999999
Q ss_pred eEEEEEcCCC--cEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEEC-CC--eEEEEEcCCCcEEEEEecCCCCEE
Q 044075 608 DLFCSCDGNS--EIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAAS-EN--VVSIFDVETDRLTHSFKGHSTEIH 680 (786)
Q Consensus 608 ~ll~sgs~Dg--~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~-dg--~I~iwD~~t~~~i~~l~~h~~~I~ 680 (786)
.++++.+.+| .|++||+.+++...... ......+|+|+++.|+.++. ++ .|+++|+.+++... +..+.....
T Consensus 261 ~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~~g~~~~ 339 (433)
T PRK04922 261 RLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LTFQGNYNA 339 (433)
T ss_pred EEEEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-eecCCCCcc
Confidence 9887776665 59999998877655433 23457899999999888775 34 47778887765433 222334455
Q ss_pred EEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCCCeEEE
Q 044075 681 SVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY---QSLELWNMAENKCMT 753 (786)
Q Consensus 681 sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d---g~I~IwDl~~~~~~~ 753 (786)
.++|+|+|++|+..+.+ .|.+||+.+++.. .+. +........|+|+|++|+..+.+ ..|+++++..+....
T Consensus 340 ~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~~~~ 417 (433)
T PRK04922 340 RASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGRVRQR 417 (433)
T ss_pred CEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEE
Confidence 78999999999876533 5999999887654 333 22344567999999998887764 368889997766666
Q ss_pred EcccCCCeEEEEEcC
Q 044075 754 IAAHDCVISALAQSP 768 (786)
Q Consensus 754 ~~~h~~~V~slafsp 768 (786)
+..+.+.+..++|+|
T Consensus 418 l~~~~g~~~~p~wsp 432 (433)
T PRK04922 418 LVSADGEVREPAWSP 432 (433)
T ss_pred cccCCCCCCCCccCC
Confidence 666777788888886
No 205
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=3.6e-13 Score=153.39 Aligned_cols=232 Identities=14% Similarity=0.189 Sum_probs=169.8
Q ss_pred CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeC---CCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCC
Q 044075 531 KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSF---DKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKN 607 (786)
Q Consensus 531 g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~---Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~ 607 (786)
..|.+||.+. .....+..|...|.+.+|+|||+.|+..+. +..|++||+.++. ...+..+.+.+.+..|+|+|+
T Consensus 182 ~~l~~~d~dg-~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~--~~~l~~~~g~~~~~~~SPDG~ 258 (435)
T PRK05137 182 KRLAIMDQDG-ANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQ--RELVGNFPGMTFAPRFSPDGR 258 (435)
T ss_pred eEEEEECCCC-CCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCc--EEEeecCCCcccCcEECCCCC
Confidence 4788888754 444566678889999999999999888764 4689999998775 344555667788999999999
Q ss_pred eEEEEEcCCCc--EEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECC---CeEEEEEcCCCcEEEEEecCCCCEE
Q 044075 608 DLFCSCDGNSE--IRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASE---NVVSIFDVETDRLTHSFKGHSTEIH 680 (786)
Q Consensus 608 ~ll~sgs~Dg~--I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~d---g~I~iwD~~t~~~i~~l~~h~~~I~ 680 (786)
.++++.+.++. |++||+.++....... .......|+|+++.++..+.. ..|+++|+.+++... +..+...+.
T Consensus 259 ~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~-lt~~~~~~~ 337 (435)
T PRK05137 259 KVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR-ISFGGGRYS 337 (435)
T ss_pred EEEEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE-eecCCCccc
Confidence 98878776665 7788998877655443 334568999999998887753 368899988765443 333455567
Q ss_pred EEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECC------CeEEEEECCCCe
Q 044075 681 SVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY------QSLELWNMAENK 750 (786)
Q Consensus 681 sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d------g~I~IwDl~~~~ 750 (786)
...|+|+|++|+..+.+ .|.+||+..+. ...+.. ...+....|+|+|+.|+..+.+ ..|+++|+..+.
T Consensus 338 ~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt~-~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~ 415 (435)
T PRK05137 338 TPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILTS-GFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRN 415 (435)
T ss_pred CeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEeccC-CCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCc
Confidence 78999999999887643 58889986554 333332 3356788999999998876653 258888988776
Q ss_pred EEEEcccCCCeEEEEEcCC
Q 044075 751 CMTIAAHDCVISALAQSPV 769 (786)
Q Consensus 751 ~~~~~~h~~~V~slafspd 769 (786)
...+. ....+...+|+|-
T Consensus 416 ~~~l~-~~~~~~~p~Wsp~ 433 (435)
T PRK05137 416 EREVP-TPGDASDPAWSPL 433 (435)
T ss_pred eEEcc-CCCCccCcccCCC
Confidence 65544 3556778888863
No 206
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.59 E-value=7.1e-14 Score=153.02 Aligned_cols=224 Identities=17% Similarity=0.279 Sum_probs=161.4
Q ss_pred CCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcCC-------Ceee
Q 044075 473 GDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSS-DGKLLASAGHDKKVVVWNMEN-------FQTE 544 (786)
Q Consensus 473 ~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t-------~~~~ 544 (786)
.-|.+.+.++.++..........-+ ....|+.+.|.| |...||+++.||.|+||.+.. ....
T Consensus 601 ~gG~iai~el~~PGrLPDgv~p~l~----------Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe 670 (1012)
T KOG1445|consen 601 SGGVIAIYELNEPGRLPDGVMPGLF----------NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPE 670 (1012)
T ss_pred CCceEEEEEcCCCCCCCcccccccc----------cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcc
Confidence 3566666666655433322222111 345799999999 788999999999999999874 3455
Q ss_pred eecCCCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEe
Q 044075 545 CTPDDHNHIITDVRFRP-NSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWN 623 (786)
Q Consensus 545 ~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwD 623 (786)
..+..|...|+++.|+| -.+.|+++++|-+|++||+.+.+ ....+.+|.+.|.+++|+|+|..+ ++.+.||+|++|+
T Consensus 671 ~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~-~~~~l~gHtdqIf~~AWSpdGr~~-AtVcKDg~~rVy~ 748 (1012)
T KOG1445|consen 671 KILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAK-LYSRLVGHTDQIFGIAWSPDGRRI-ATVCKDGTLRVYE 748 (1012)
T ss_pred eeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhh-hhheeccCcCceeEEEECCCCcce-eeeecCceEEEeC
Confidence 67789999999999999 56689999999999999999877 467889999999999999999865 4888999999999
Q ss_pred CCCCee-eEeecCC----eEEEEEeCCCCEEEEEECC----CeEEEEEcCCCc--EEEEEec-CCCCEEEEEEcCCCC-E
Q 044075 624 LSQYSC-ARISKGG----TVQVRFQPRLGLLLAAASE----NVVSIFDVETDR--LTHSFKG-HSTEIHSVCWDTNGE-Y 690 (786)
Q Consensus 624 l~~~~~-~~~~~~~----i~~i~~sp~g~~Ll~gs~d----g~I~iwD~~t~~--~i~~l~~-h~~~I~sv~~spdg~-~ 690 (786)
.++.+. +..-++. -..|.|..+|+++++.+.| ..|.+||..+-. .+.+..- -...+.--.+++|.. +
T Consensus 749 Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~l 828 (1012)
T KOG1445|consen 749 PRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVL 828 (1012)
T ss_pred CCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceE
Confidence 887543 3333322 3468899999999988876 468889887642 2222211 111122223455555 4
Q ss_pred EEEEeCC-eEEEEECCCCe
Q 044075 691 LASVSQD-SVRVWSLASGE 708 (786)
Q Consensus 691 Lasgs~D-~I~vwDl~s~~ 708 (786)
|++|-.| .|.+|.+-...
T Consensus 829 fltGKGD~~v~~yEv~~es 847 (1012)
T KOG1445|consen 829 FLTGKGDRFVNMYEVIYES 847 (1012)
T ss_pred EEecCCCceEEEEEecCCC
Confidence 5566666 89999986543
No 207
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.59 E-value=3.7e-13 Score=138.17 Aligned_cols=270 Identities=16% Similarity=0.248 Sum_probs=201.8
Q ss_pred CCCeEEEEEcCCCCEEEEE-ECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCC-EEEEEeCCCcEEEEcCCCCcce
Q 044075 509 SSKVTCCHFSSDGKLLASA-GHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNST-QLATSSFDKTVRIWDAAKPNFC 586 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasg-s~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~-~Lasgs~Dg~I~VWdl~s~~~~ 586 (786)
-++|.-+.|..|..+++++ ..|+.|.+|++...+-...+......+..++|+|||+ +|.+...|-.|.||.+.+.+.
T Consensus 48 ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~- 126 (447)
T KOG4497|consen 48 LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKG- 126 (447)
T ss_pred HHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEecccee-
Confidence 4678889999988776654 5788999999999888889988889999999999995 556677799999999988663
Q ss_pred eeeecCCCCCeEEEEEecCCCeEEEEEcCC-----------------------------------CcEEEEeCCCCeeeE
Q 044075 587 LQTYTGHNNHVMSLDFHPKKNDLFCSCDGN-----------------------------------SEIRFWNLSQYSCAR 631 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D-----------------------------------g~I~iwDl~~~~~~~ 631 (786)
..+.-.+..+..++|+|+|.+..+..-.| ..+.+||---.-.+.
T Consensus 127 -~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~ 205 (447)
T KOG4497|consen 127 -YLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVY 205 (447)
T ss_pred -EEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheee
Confidence 22332344568889999988665433222 234444432211111
Q ss_pred ee--cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEE-------------------------------------
Q 044075 632 IS--KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSF------------------------------------- 672 (786)
Q Consensus 632 ~~--~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l------------------------------------- 672 (786)
.. .-++..++|+|.+.+|++|+.|+.++|.+--+.+....+
T Consensus 206 aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~ 285 (447)
T KOG4497|consen 206 AYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLE 285 (447)
T ss_pred eeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccc
Confidence 11 246778899999999999999998887543322211110
Q ss_pred -----------------------e------cCCCCEEEEEEcCCCCEEEEEeCC---eEEEEECCCCeeEEEEccCCCce
Q 044075 673 -----------------------K------GHSTEIHSVCWDTNGEYLASVSQD---SVRVWSLASGECIHELSSSGNKF 720 (786)
Q Consensus 673 -----------------------~------~h~~~I~sv~~spdg~~Lasgs~D---~I~vwDl~s~~~i~~l~~~~~~I 720 (786)
+ ...-.+.-++|++|..|+++-.+. .+.+||++..+....+ ....+|
T Consensus 286 a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avL-iQk~pi 364 (447)
T KOG4497|consen 286 AHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVL-IQKHPI 364 (447)
T ss_pred cCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhh-hhccce
Confidence 0 011234568999999999998876 6999999987654444 345889
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCc
Q 044075 721 HSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKS 781 (786)
Q Consensus 721 ~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~ 781 (786)
....|+|..+.|+.+.+...+++|......++......-.|..+.|.-+|..++.++.|..
T Consensus 365 raf~WdP~~prL~vctg~srLY~W~psg~~~V~vP~~GF~i~~l~W~~~g~~i~l~~kDaf 425 (447)
T KOG4497|consen 365 RAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVGVPKKGFNIQKLQWLQPGEFIVLCGKDAF 425 (447)
T ss_pred eEEEeCCCCceEEEEcCCceEEEEcCCCceEEecCCCCceeeeEEecCCCcEEEEEcCCce
Confidence 9999999999999999999999999998888877777789999999999999999998853
No 208
>KOG4594 consensus Sequence-specific single-stranded-DNA-binding protein [Replication, recombination and repair; Transcription; General function prediction only]
Probab=99.58 E-value=7.6e-16 Score=154.06 Aligned_cols=69 Identities=30% Similarity=0.755 Sum_probs=60.6
Q ss_pred CcchHHHhHHHHHHHHhhcCCcHHHHHHHHhcCCCCCCCccCCCCCCchHHHHHHHHHhhhcccCCCCCh
Q 044075 6 SNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVAPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSE 75 (786)
Q Consensus 6 ~~~~~~~~l~~yiydy~~k~~~~~~a~~~~~e~~~~~~~~~~~~~~~fL~eww~~fwd~f~a~~~~~~~~ 75 (786)
++-.|+++|..||||||++-+..++|++||.|..++++.. +-.+.+||.+|||||||+|+|..+|+...
T Consensus 12 Sd~qArekLa~YvYEYLlhvgaqksaqtflseirweknit-lge~p~FLhsWWcvFwDLYcAAPeRRd~c 80 (354)
T KOG4594|consen 12 SDSQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNIT-LGEPPGFLHSWWCVFWDLYCAAPERRDTC 80 (354)
T ss_pred cchhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhhhh-ccCCcchhhhhHHHHHHHhhcCccccCcc
Confidence 4567999999999999999999999999999999888755 44677999999999999999987775543
No 209
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.58 E-value=2.9e-12 Score=131.63 Aligned_cols=265 Identities=17% Similarity=0.248 Sum_probs=178.4
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEE-EEeCC------CcEEEEcCCCC
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLA-TSSFD------KTVRIWDAAKP 583 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~La-sgs~D------g~I~VWdl~s~ 583 (786)
....++|+.|...+++|..+| .+||+++..+....-..+.+.+.-+...-..++|+ +|+.+ ..|.|||=. .
T Consensus 7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~-k 84 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDL-K 84 (346)
T ss_pred ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecc-c
Confidence 455699999999999998666 99999987655444433333322222222344554 34333 469999933 3
Q ss_pred cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC-CCeeeEeec---CCeEEEEEeCC--CCEEEEEE-CCC
Q 044075 584 NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS-QYSCARISK---GGTVQVRFQPR--LGLLLAAA-SEN 656 (786)
Q Consensus 584 ~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~-~~~~~~~~~---~~i~~i~~sp~--g~~Ll~gs-~dg 656 (786)
+.++..+. ...+|.++.+.++ .+++. ..+.|++|.+. ..+.++.+. .+---++..|. ...|+.-+ .-|
T Consensus 85 ~~~i~el~-f~~~I~~V~l~r~--riVvv--l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~G 159 (346)
T KOG2111|consen 85 ERCIIELS-FNSEIKAVKLRRD--RIVVV--LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTG 159 (346)
T ss_pred CcEEEEEE-eccceeeEEEcCC--eEEEE--ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccc
Confidence 33444443 5678999999854 34422 27899999987 444444332 11112333332 22333322 358
Q ss_pred eEEEEEcCCCcE--EEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccC--CCceEEEEEeCCCC
Q 044075 657 VVSIFDVETDRL--THSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSS--GNKFHSCIFHPSYP 730 (786)
Q Consensus 657 ~I~iwD~~t~~~--i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~--~~~I~sv~fspdg~ 730 (786)
.|.|.|+...+. ...+..|.+.|.|++++-+|..+|++|.. -|||||..+|+.+.+++.. ...|.+++|+|+..
T Consensus 160 qvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s 239 (346)
T KOG2111|consen 160 QVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSS 239 (346)
T ss_pred eEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCcc
Confidence 999999987655 46778899999999999999999999988 6999999999999998754 45699999999999
Q ss_pred EEEEEECCCeEEEEECCCCe---E----------E------------EEcccCCCeEEEEEcCCCCEEEEEeCCCcE
Q 044075 731 TLMVIGGYQSLELWNMAENK---C----------M------------TIAAHDCVISALAQSPVTGMVASASHDKSV 782 (786)
Q Consensus 731 ~L~sgs~dg~I~IwDl~~~~---~----------~------------~~~~h~~~V~slafspdg~~LaSgs~DG~I 782 (786)
+|++++..|+|+||.++... . + .+.-..+...-++|..+.+.++..+.||.-
T Consensus 240 ~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy 316 (346)
T KOG2111|consen 240 WLAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGTQCIIAFGSETNTVIAICADGSY 316 (346)
T ss_pred EEEEEcCCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCCcEEEEecCCCCeEEEEEeCCcE
Confidence 99999999999999886522 1 0 111123445556677665556666667754
No 210
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.58 E-value=1.7e-13 Score=145.36 Aligned_cols=188 Identities=18% Similarity=0.231 Sum_probs=144.0
Q ss_pred EEEEEecCCCeEEEEEcCCCcEEEEeCCCC-eee--------E--eecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC
Q 044075 598 MSLDFHPKKNDLFCSCDGNSEIRFWNLSQY-SCA--------R--ISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETD 666 (786)
Q Consensus 598 ~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~-~~~--------~--~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~ 666 (786)
.....+|.++..++....++...-|..-.. .+. . ...+.-..++|+.+|..+++++.||+++||+....
T Consensus 97 ~~~~~h~~~~~~~~k~~~~~~~~~~e~~~~~d~~~~~~a~v~~~l~~~g~~k~vaf~~~gs~latgg~dg~lRv~~~Ps~ 176 (398)
T KOG0771|consen 97 YRESVHPNGNGRARKLPSGCECFHFEFVASSDFNAETAANVYQKLVDFGQQKVVAFNGDGSKLATGGTDGTLRVWEWPSM 176 (398)
T ss_pred hhhhccccCCeeeeecCCcccccccccccccccchhhhhhHhHHHhhcCcceEEEEcCCCCEeeeccccceEEEEecCcc
Confidence 344456666666655555554444433221 100 0 01133478999999999999999999999998888
Q ss_pred cEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEc--------------------------------
Q 044075 667 RLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELS-------------------------------- 714 (786)
Q Consensus 667 ~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~-------------------------------- 714 (786)
..+.....|...|.++.|+|||++|++.+.|..+||++.++.++.+..
T Consensus 177 ~t~l~e~~~~~eV~DL~FS~dgk~lasig~d~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~ 256 (398)
T KOG0771|consen 177 LTILEEIAHHAEVKDLDFSPDGKFLASIGADSARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGG 256 (398)
T ss_pred hhhhhhHhhcCccccceeCCCCcEEEEecCCceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCC
Confidence 777777789999999999999999999999999999998772211110
Q ss_pred ----------------------cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEE--cccCCCeEEEEEcCCC
Q 044075 715 ----------------------SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTI--AAHDCVISALAQSPVT 770 (786)
Q Consensus 715 ----------------------~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~--~~h~~~V~slafspdg 770 (786)
.....|.+++++++|++++.|+.||.|.|++..+-+++.+ ..|...|+.|.|+||.
T Consensus 257 ~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pds 336 (398)
T KOG0771|consen 257 GVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDS 336 (398)
T ss_pred ceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCc
Confidence 0023678999999999999999999999999999887744 4799999999999999
Q ss_pred CEEEEEeCCCcEEEe
Q 044075 771 GMVASASHDKSVKIW 785 (786)
Q Consensus 771 ~~LaSgs~DG~I~IW 785 (786)
+++++.+.|..+.|.
T Consensus 337 r~~~svSs~~~~~v~ 351 (398)
T KOG0771|consen 337 RYLASVSSDNEAAVT 351 (398)
T ss_pred CcccccccCCceeEE
Confidence 999999888877653
No 211
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.57 E-value=3.3e-13 Score=147.10 Aligned_cols=274 Identities=15% Similarity=0.206 Sum_probs=204.5
Q ss_pred cCCCCeEEEEEcCCCCEE-EEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc
Q 044075 507 KSSSKVTCCHFSSDGKLL-ASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF 585 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~L-asgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~ 585 (786)
.|....+.|..+|||+|+ |+|...-.|++||+.+......-......|.-.-++.|-..++.-..|.+|-+.......+
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy 128 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHY 128 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeee
Confidence 377788999999999985 6777888999999987665444333344566666666666677777788887654322111
Q ss_pred eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEE
Q 044075 586 CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFD 662 (786)
Q Consensus 586 ~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD 662 (786)
-..-...-.+++++.-...|++.|+ ...|+-++++.+..+..+. +.+.+|.+++....|++|+.+|.|..||
T Consensus 129 ----~~RIP~~GRDm~y~~~scDly~~gs-g~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwD 203 (703)
T KOG2321|consen 129 ----RTRIPKFGRDMKYHKPSCDLYLVGS-GSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWD 203 (703)
T ss_pred ----eeecCcCCccccccCCCccEEEeec-CcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEec
Confidence 1111233466777766666764444 6689999999988776655 6788899999999999999999999999
Q ss_pred cCCCcEEEEEec------CCC-----CEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEc-cCCCceEEEEEeCCC
Q 044075 663 VETDRLTHSFKG------HST-----EIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELS-SSGNKFHSCIFHPSY 729 (786)
Q Consensus 663 ~~t~~~i~~l~~------h~~-----~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~-~~~~~I~sv~fspdg 729 (786)
.++...+..+.. |.. .|+++.|+.+|-.+++|+.. .|.|||+++.+++..-. ....+|..+.|.+.+
T Consensus 204 pR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~ 283 (703)
T KOG2321|consen 204 PRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTD 283 (703)
T ss_pred chhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccC
Confidence 998877666542 222 49999999999999999888 99999999988765432 235678889997763
Q ss_pred CE-EEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 730 PT-LMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 730 ~~-L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
.. .++......++|||-.+++..........|..+++-|++.+++++-+++.+..|
T Consensus 284 ~q~~v~S~Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m~~y 340 (703)
T KOG2321|consen 284 QQNKVVSMDKRILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFTANESSKMHTY 340 (703)
T ss_pred CCceEEecchHHhhhcccccCCceeeccccCCcCceeeecCCceEEEecCCCcceeE
Confidence 32 333333458999999999999888888889999999999999999888776543
No 212
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.57 E-value=5.4e-13 Score=144.59 Aligned_cols=200 Identities=17% Similarity=0.253 Sum_probs=143.6
Q ss_pred eEEEEEc-----CCCCEEEEEECCCeEEEEEcCCCeeeeecC----CCCCCeEEEEEccC-CCEEEEEeCCCcEEEEcCC
Q 044075 512 VTCCHFS-----SDGKLLASAGHDKKVVVWNMENFQTECTPD----DHNHIITDVRFRPN-STQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 512 V~~lafS-----pdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~----~h~~~V~sl~fspd-g~~Lasgs~Dg~I~VWdl~ 581 (786)
.+|-+|+ +++--|+.|-..|.|.+.|....+..+.+. -....|+|+.|-|. ...|+++-.+|.+++||..
T Consensus 171 P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~ 250 (636)
T KOG2394|consen 171 PTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKE 250 (636)
T ss_pred CceecccccccCCCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeecc
Confidence 4455553 456668888888999999876533222221 13468999999994 4567777889999999873
Q ss_pred CCcceeeeecCCCCCeEEEE--EecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEE
Q 044075 582 KPNFCLQTYTGHNNHVMSLD--FHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVS 659 (786)
Q Consensus 582 s~~~~~~~~~~h~~~V~sl~--~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~ 659 (786)
... ..+... ..+++..+-+--+.. ..+-+-..+..+.++.+..++|+|||.+|++.+.||.++
T Consensus 251 ~~~-----------~~t~p~~~~~k~~~~f~i~t~ks----k~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLR 315 (636)
T KOG2394|consen 251 IVC-----------GATAPSYQALKDGDQFAILTSKS----KKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLR 315 (636)
T ss_pred ccc-----------cCCCCcccccCCCCeeEEeeeec----cccCCccceeEeccccccceeEcCCCceEEEEecCceEE
Confidence 211 111111 122222221111100 000011222334456888999999999999999999999
Q ss_pred EEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEe
Q 044075 660 IFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFH 726 (786)
Q Consensus 660 iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fs 726 (786)
|||..+.+++..++..-+...||||+|||+||++|++| -|.||.+...+.+..-.+|...|..++|+
T Consensus 316 vF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 316 IFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred EeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeec
Confidence 99999998888877777889999999999999999999 99999999999999999999999999998
No 213
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.56 E-value=2.3e-13 Score=142.93 Aligned_cols=261 Identities=13% Similarity=0.192 Sum_probs=202.4
Q ss_pred cCCCCeEEEEEcCCCC--EEEEEECCCeEEEEEcCCCeeeeec------CCCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 507 KSSSKVTCCHFSSDGK--LLASAGHDKKVVVWNMENFQTECTP------DDHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~--~Lasgs~Dg~V~IWdl~t~~~~~~l------~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
.....|+.++|.-|++ .|..++.|..+..+.+.+......+ ......|..++.. +..|++|-.+|.+.+|
T Consensus 53 ~~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~--dg~Litc~~sG~l~~~ 130 (412)
T KOG3881|consen 53 DELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA--DGTLITCVSSGNLQVR 130 (412)
T ss_pred chhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc--CCEEEEEecCCcEEEE
Confidence 3455688888876554 4555556777888777766555443 3345567666655 3468888889999999
Q ss_pred cCCCCc---ceeeeecCCCCCeEEEEEecCCCeEEEEEcCC--CcEEEEeCCCCeeeEeec------------CCeEEEE
Q 044075 579 DAAKPN---FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN--SEIRFWNLSQYSCARISK------------GGTVQVR 641 (786)
Q Consensus 579 dl~s~~---~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D--g~I~iwDl~~~~~~~~~~------------~~i~~i~ 641 (786)
..+.+. ..+..+..+ ..+..+.-++...+++++|+.. ..+.+||+...+.+..-+ -.++.+.
T Consensus 131 ~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~ 209 (412)
T KOG3881|consen 131 HDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIR 209 (412)
T ss_pred eccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccce
Confidence 988443 112223322 5677788888889999999988 899999999875443322 2345677
Q ss_pred EeCC--CCEEEEEECCCeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEE-EccC
Q 044075 642 FQPR--LGLLLAAASENVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHE-LSSS 716 (786)
Q Consensus 642 ~sp~--g~~Ll~gs~dg~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~-l~~~ 716 (786)
|-+. ...|++++.-+.|++||.+.+ +++..|.....+|+++...|++++|+++... .+..||++.++.+.. +.+-
T Consensus 210 Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~ 289 (412)
T KOG3881|consen 210 FLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGI 289 (412)
T ss_pred ecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCc
Confidence 8777 788999999999999999987 7888888888999999999999999999888 999999999988766 8888
Q ss_pred CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCC
Q 044075 717 GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVT 770 (786)
Q Consensus 717 ~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg 770 (786)
.+.|+++..+|..++++++|-|..|+|+|+.+.+.+.-..-...+++|.+.++-
T Consensus 290 tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~lt~il~~~~~ 343 (412)
T KOG3881|consen 290 TGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSRLTFILLRDDV 343 (412)
T ss_pred cCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhccccEEEecCCc
Confidence 999999999999999999999999999999997776555556667777776543
No 214
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.56 E-value=1.8e-13 Score=148.27 Aligned_cols=242 Identities=16% Similarity=0.216 Sum_probs=168.7
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeee----eecCCCCCCeEEEEE-----ccCCCEEEEEeCCCcEEEEcCC
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTE----CTPDDHNHIITDVRF-----RPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~----~~l~~h~~~V~sl~f-----spdg~~Lasgs~Dg~I~VWdl~ 581 (786)
.++...++-.|++|+..- ...+++|+...+..+ ....-.....+|-.| .+.+--|++|-.-|.|.+.|..
T Consensus 125 ~~~~~~~~~~gd~lcFnv-g~~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~ 203 (636)
T KOG2394|consen 125 IVTNTNQSGKGDRLCFNV-GRELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPI 203 (636)
T ss_pred ceeeccccCCCCEEEEec-CCeEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccCceEEecch
Confidence 344555555677776653 456888887632211 111111112233344 3355567888888899999876
Q ss_pred CCcceeeeec----CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeE--EEEEeCCCCEEEEEECC
Q 044075 582 KPNFCLQTYT----GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTV--QVRFQPRLGLLLAAASE 655 (786)
Q Consensus 582 s~~~~~~~~~----~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~--~i~~sp~g~~Ll~gs~d 655 (786)
..+. .+.+. -....|+||.|.|.++.+|+.+-.+|.+++||... ..... +....+++..|.+....
T Consensus 204 ~~~~-sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~-------~~~~t~p~~~~~k~~~~f~i~t~k 275 (636)
T KOG2394|consen 204 NFEV-SKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEI-------VCGATAPSYQALKDGDQFAILTSK 275 (636)
T ss_pred hhHH-HHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccc-------cccCCCCcccccCCCCeeEEeeee
Confidence 6331 11111 12378999999999999999999999999999721 11111 12223444444443321
Q ss_pred CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEE
Q 044075 656 NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMV 734 (786)
Q Consensus 656 g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~s 734 (786)
+ ..+..++..+..-...|+..+|+|||++||+.+.| .++|||..+.+++..++.--+...||+|+|||+||++
T Consensus 276 s------k~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvt 349 (636)
T KOG2394|consen 276 S------KKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVT 349 (636)
T ss_pred c------cccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEe
Confidence 1 11224444444455689999999999999999999 9999999998888777777788999999999999999
Q ss_pred EECCCeEEEEECCCCeEE-EEcccCCCeEEEEEc
Q 044075 735 IGGYQSLELWNMAENKCM-TIAAHDCVISALAQS 767 (786)
Q Consensus 735 gs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafs 767 (786)
|+.|.-|.||.+.+.+++ .-.+|.+.|+.|+|.
T Consensus 350 GGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 350 GGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred cCCcceEEEEEeccceEEEeccccccceeeEeec
Confidence 999999999999999988 456999999999998
No 215
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.56 E-value=2.2e-13 Score=156.91 Aligned_cols=241 Identities=15% Similarity=0.218 Sum_probs=175.5
Q ss_pred CCCCeEEEEEcC--CCCEEEEEECCCeEEEEEcC-----CCeeeeecCC-------CCCCeEEEEEccCCCEEEEEeCCC
Q 044075 508 SSSKVTCCHFSS--DGKLLASAGHDKKVVVWNME-----NFQTECTPDD-------HNHIITDVRFRPNSTQLATSSFDK 573 (786)
Q Consensus 508 H~~~V~~lafSp--dg~~Lasgs~Dg~V~IWdl~-----t~~~~~~l~~-------h~~~V~sl~fspdg~~Lasgs~Dg 573 (786)
....|+.+.+-. |..+|++|+.||.|+||+-. +.+.+..+.+ ..+.=.-+.|.....+|++++.-.
T Consensus 1108 ~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r 1187 (1387)
T KOG1517|consen 1108 PDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVR 1187 (1387)
T ss_pred CCCccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCee
Confidence 456799998876 56789999999999999742 2233332211 111124467877666777777788
Q ss_pred cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee---e---EeecCC--eEEEEEeCC
Q 044075 574 TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC---A---RISKGG--TVQVRFQPR 645 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~---~---~~~~~~--i~~i~~sp~ 645 (786)
.|+|||......+...-.+....|+++.-+-....++++|..||.|++||.+.... + +.+... |..+.+.+.
T Consensus 1188 ~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~ 1267 (1387)
T KOG1517|consen 1188 SIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQ 1267 (1387)
T ss_pred EEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecC
Confidence 99999999877554455556677888877666667888999999999999986432 2 233333 788888886
Q ss_pred CC-EEEEEECCCeEEEEEcCCCcEE--EEEecC---CCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEcc----
Q 044075 646 LG-LLLAAASENVVSIFDVETDRLT--HSFKGH---STEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSS---- 715 (786)
Q Consensus 646 g~-~Ll~gs~dg~I~iwD~~t~~~i--~~l~~h---~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~---- 715 (786)
|- .|++|+.+|.|++||++..... ..+..| .+.++++..+++...+++|+...|+||++.. +.+..++.
T Consensus 1268 G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~q~ikIy~~~G-~~l~~~k~n~~F 1346 (1387)
T KOG1517|consen 1268 GLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSAQLIKIYSLSG-EQLNIIKYNPGF 1346 (1387)
T ss_pred CCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCcceEEEEecCh-hhhcccccCccc
Confidence 64 5999999999999999984222 222223 2359999999999999999988999999864 33333322
Q ss_pred ---CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC
Q 044075 716 ---SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 716 ---~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~ 749 (786)
..+.+.|++|||..-.+++|..|..|.||.....
T Consensus 1347 ~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1347 MGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred ccCcCCCcceeeecchhHhhhhccCCceEEEeecCCc
Confidence 2356789999999999999999999999987654
No 216
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.56 E-value=1.2e-12 Score=148.63 Aligned_cols=233 Identities=15% Similarity=0.147 Sum_probs=160.5
Q ss_pred CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC---CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCC
Q 044075 531 KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFD---KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKN 607 (786)
Q Consensus 531 g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D---g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~ 607 (786)
..|.+||.+ +.....+..+...+.+.+|+||++.|+..+.+ ..|.+||+.+++. ..+....+.+.+..|+|+++
T Consensus 176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~--~~l~~~~g~~~~~~~SPDG~ 252 (427)
T PRK02889 176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRR--RVVANFKGSNSAPAWSPDGR 252 (427)
T ss_pred cEEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCE--EEeecCCCCccceEECCCCC
Confidence 457777764 44445555777889999999999999887753 3599999988763 23333445667899999999
Q ss_pred eEEEEEcCCCcEEEE--eCCCCeeeEeec--CCeEEEEEeCCCCEEEEEEC-CCeEEE--EEcCCCcEEEEEecCCCCEE
Q 044075 608 DLFCSCDGNSEIRFW--NLSQYSCARISK--GGTVQVRFQPRLGLLLAAAS-ENVVSI--FDVETDRLTHSFKGHSTEIH 680 (786)
Q Consensus 608 ~ll~sgs~Dg~I~iw--Dl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~-dg~I~i--wD~~t~~~i~~l~~h~~~I~ 680 (786)
.++++.+.++...+| |+..+....... .......|+|+|+.|+..+. ++...| +++.++..... ..+.....
T Consensus 253 ~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~l-t~~g~~~~ 331 (427)
T PRK02889 253 TLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRV-TFTGSYNT 331 (427)
T ss_pred EEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEE-ecCCCCcC
Confidence 998888878876665 455444333322 33456889999999887665 344444 45555543322 22233345
Q ss_pred EEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCC---eEEEEECCCCeEEE
Q 044075 681 SVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ---SLELWNMAENKCMT 753 (786)
Q Consensus 681 sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg---~I~IwDl~~~~~~~ 753 (786)
...|+|||++|+..+.+ .|.+||+.+++.. .+... .......|+|+++.|+.++.++ .+++.++.......
T Consensus 332 ~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~-~lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g~~~~~ 409 (427)
T PRK02889 332 SPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT-ALTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVSSDGRIKQR 409 (427)
T ss_pred ceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE-EccCC-CCccCceECCCCCEEEEEEecCCCEEEEEEECCCCceEE
Confidence 67899999999877643 5999999887654 33322 3346789999999998888654 46777775544445
Q ss_pred EcccCCCeEEEEEcCC
Q 044075 754 IAAHDCVISALAQSPV 769 (786)
Q Consensus 754 ~~~h~~~V~slafspd 769 (786)
+..+.+.+...+|+|-
T Consensus 410 l~~~~g~~~~p~wsp~ 425 (427)
T PRK02889 410 LSVQGGDVREPSWGPF 425 (427)
T ss_pred eecCCCCCCCCccCCC
Confidence 6567788888899874
No 217
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.55 E-value=6.3e-14 Score=151.32 Aligned_cols=205 Identities=15% Similarity=0.209 Sum_probs=164.1
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEE
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSL 600 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl 600 (786)
.+.|+.++.||.+.|.+ +.++....+..|.+.|.|-.|+|||.-|+++++||.|++|.-.. ....++.....+|.|+
T Consensus 75 ~d~~~i~s~DGkf~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsG--MLRStl~Q~~~~v~c~ 151 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSG--MLRSTVVQNEESIRCA 151 (737)
T ss_pred cceEEEEcCCceEEEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccc--hHHHHHhhcCceeEEE
Confidence 34688888999999987 55778888899999999999999999999999999999998543 1233445566789999
Q ss_pred EEecCCCeEEEEEcCCCcEEEEeCCCCeee---EeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCC
Q 044075 601 DFHPKKNDLFCSCDGNSEIRFWNLSQYSCA---RISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHST 677 (786)
Q Consensus 601 ~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~---~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~ 677 (786)
+|.|+.+.++++.+ +.+.+=.+.....+ +.+.+-+.++.|++..+.+++|+.|-..+|||.. |..+..-..|..
T Consensus 152 ~W~p~S~~vl~c~g--~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey 228 (737)
T KOG1524|consen 152 RWAPNSNSIVFCQG--GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEY 228 (737)
T ss_pred EECCCCCceEEecC--CeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChhcc
Confidence 99999998885554 45555444433222 3455778999999999999999999999999976 556666667999
Q ss_pred CEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEE
Q 044075 678 EIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLEL 743 (786)
Q Consensus 678 ~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~I 743 (786)
+|++|+|.|+ +.++.++.+++++=. ...+.|..++|++||..+++|+..|.+.+
T Consensus 229 ~ITSva~npd-~~~~v~S~nt~R~~~-----------p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 229 AITSVAFNPE-KDYLLWSYNTARFSS-----------PRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred ceeeeeeccc-cceeeeeeeeeeecC-----------CCccceEEEEEcCCCceeeccccCceEEE
Confidence 9999999999 778888888777221 23467889999999999999999987654
No 218
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.55 E-value=1.6e-12 Score=148.72 Aligned_cols=274 Identities=20% Similarity=0.230 Sum_probs=194.0
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCC---CEEEEEeCCCcEEEEcCCCC
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNS---TQLATSSFDKTVRIWDAAKP 583 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg---~~Lasgs~Dg~I~VWdl~s~ 583 (786)
+-...-..-.||+|+++++.+. +..|.||...++.++..+.+|..+++.+.+.|.. .++++++.||.|++||...+
T Consensus 14 g~n~~~~~avfSnD~k~l~~~~-~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~ 92 (792)
T KOG1963|consen 14 GRNGNKSPAVFSNDAKFLFLCT-GNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDG 92 (792)
T ss_pred cccceecccccccCCcEEEEee-CCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCc
Confidence 3333333456899999888775 6789999999999999999999999999998854 46789999999999999887
Q ss_pred cceeeeecCCCCCeEEEEEecC---CCeEEEEEcCCC------------cEEEEeCCCCeee--EeecCC--eEEEEEeC
Q 044075 584 NFCLQTYTGHNNHVMSLDFHPK---KNDLFCSCDGNS------------EIRFWNLSQYSCA--RISKGG--TVQVRFQP 644 (786)
Q Consensus 584 ~~~~~~~~~h~~~V~sl~~sp~---g~~ll~sgs~Dg------------~I~iwDl~~~~~~--~~~~~~--i~~i~~sp 644 (786)
. .++++..+ .++..+.+.|. ....+..+..|. .++-+.+.+.... ...+.. ..++.+++
T Consensus 93 ~-Llkt~~~~-~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~ 170 (792)
T KOG1963|consen 93 E-LLKTFDNN-LPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNN 170 (792)
T ss_pred E-EEEEEecC-CceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcC
Confidence 6 45555432 33444444221 111111111111 1111111111000 001111 35566666
Q ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEE----EecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC----CeeEEEEcc
Q 044075 645 RLGLLLAAASENVVSIFDVETDRLTHS----FKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS----GECIHELSS 715 (786)
Q Consensus 645 ~g~~Ll~gs~dg~I~iwD~~t~~~i~~----l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s----~~~i~~l~~ 715 (786)
.+.+..+ ..+..+.+|...+...... -..|...+++.+++|++++++++..| .|.+|.--. ......+.-
T Consensus 171 ~ge~~~i-~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHW 249 (792)
T KOG1963|consen 171 SGEFKGI-VHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHW 249 (792)
T ss_pred CceEEEE-EEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEe
Confidence 6655444 4456788888877541111 11367778999999999999999988 999995432 234456667
Q ss_pred CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 716 SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 716 ~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~I 784 (786)
|...|.+++|+++|.+|++||..+.+.+|.+.+++...+..-.++|..+.++||+.+.+....|+.|.+
T Consensus 250 H~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~l 318 (792)
T KOG1963|consen 250 HHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHL 318 (792)
T ss_pred cccccceeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEE
Confidence 889999999999999999999999999999999997778888999999999999999999999998876
No 219
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.55 E-value=3.2e-13 Score=139.41 Aligned_cols=272 Identities=18% Similarity=0.328 Sum_probs=190.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe-----eeeecCCC------------CCCeEEEEEccCCC--EEEE
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ-----TECTPDDH------------NHIITDVRFRPNST--QLAT 568 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~-----~~~~l~~h------------~~~V~sl~fspdg~--~Las 568 (786)
..+-|.++.|..+|.+||||+.+|.|.++.-+... ....+..| ...|..+.|.++++ .++.
T Consensus 24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl 103 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL 103 (433)
T ss_pred hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence 34569999999999999999999999999754322 22333333 34688899998654 6778
Q ss_pred EeCCCcEEEEcCCCCccee----------------------------------ee-ecCCCCCeEEEEEecCCCeEEEEE
Q 044075 569 SSFDKTVRIWDAAKPNFCL----------------------------------QT-YTGHNNHVMSLDFHPKKNDLFCSC 613 (786)
Q Consensus 569 gs~Dg~I~VWdl~s~~~~~----------------------------------~~-~~~h~~~V~sl~~sp~g~~ll~sg 613 (786)
.+.|.+|++|.+....... +. -.+|...|.+|.++.|...++ ++
T Consensus 104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~l-SA 182 (433)
T KOG1354|consen 104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFL-SA 182 (433)
T ss_pred ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEe-ec
Confidence 8889999999875432110 11 135888899999998888766 55
Q ss_pred cCCCcEEEEeCCCCe----eeEeec-------CCeEEEEEeCCC-CEEEEEECCCeEEEEEcCCCcEEE----EE-----
Q 044075 614 DGNSEIRFWNLSQYS----CARISK-------GGTVQVRFQPRL-GLLLAAASENVVSIFDVETDRLTH----SF----- 672 (786)
Q Consensus 614 s~Dg~I~iwDl~~~~----~~~~~~-------~~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t~~~i~----~l----- 672 (786)
+ |-.|.+|+++... .+.+.. .-|++..|+|.. +.|+..++.|+|++.|++...+.. .+
T Consensus 183 D-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEeped 261 (433)
T KOG1354|consen 183 D-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPED 261 (433)
T ss_pred c-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccC
Confidence 4 8899999987421 222111 346777899875 456666778999999998542211 11
Q ss_pred -------ecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECC-CCeeEEEEccCC------------Cc---eEEEEEeCCC
Q 044075 673 -------KGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLA-SGECIHELSSSG------------NK---FHSCIFHPSY 729 (786)
Q Consensus 673 -------~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~-s~~~i~~l~~~~------------~~---I~sv~fspdg 729 (786)
.+--..|..+.|+++|+|+++-..-+|+|||+. ..+++.++..|. .. -..|+|+.++
T Consensus 262 p~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~ 341 (433)
T KOG1354|consen 262 PSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGND 341 (433)
T ss_pred CcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCc
Confidence 112346889999999999998777799999994 456666665552 12 2468899999
Q ss_pred CEEEEEECCCeEEEEECCCCeEE--------------------EEc--c-------------cCCCeEEEEEcCCCCEEE
Q 044075 730 PTLMVIGGYQSLELWNMAENKCM--------------------TIA--A-------------HDCVISALAQSPVTGMVA 774 (786)
Q Consensus 730 ~~L~sgs~dg~I~IwDl~~~~~~--------------------~~~--~-------------h~~~V~slafspdg~~La 774 (786)
.++++|+..+.+++|++..+... .+. + ....|...+|+|..+.||
T Consensus 342 ~~v~TGsy~n~frvf~~~~gsk~d~tl~asr~~~~~~~~~k~~~V~~~g~r~~~~~~vd~ldf~kkilh~aWhp~en~ia 421 (433)
T KOG1354|consen 342 SYVMTGSYNNVFRVFNLARGSKEDFTLEASRKNMKPRKVLKLRLVSSSGKRKRDEISVDALDFRKKILHTAWHPKENSIA 421 (433)
T ss_pred ceEecccccceEEEecCCCCcceeecccccccCCcccccccceeeecCCCccccccccchhhhhhHHHhhccCCccceee
Confidence 99999999999999996554321 000 1 112355678999999998
Q ss_pred EEeCCCc
Q 044075 775 SASHDKS 781 (786)
Q Consensus 775 Sgs~DG~ 781 (786)
.+..+..
T Consensus 422 ~aatnnl 428 (433)
T KOG1354|consen 422 VAATNNL 428 (433)
T ss_pred eeecCce
Confidence 8876643
No 220
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.55 E-value=4.6e-13 Score=137.44 Aligned_cols=220 Identities=21% Similarity=0.296 Sum_probs=174.8
Q ss_pred CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc--ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC-
Q 044075 549 DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN--FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS- 625 (786)
Q Consensus 549 ~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~--~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~- 625 (786)
....+|+|.+|++|...+|++.....|.||...... ...+++..|...|++|+|.|..+.|+ +|+.|..-++|...
T Consensus 8 ~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIv-tcs~drnayVw~~~~ 86 (361)
T KOG1523|consen 8 RLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIV-TCSHDRNAYVWTQPS 86 (361)
T ss_pred eccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCcee-EccCCCCccccccCC
Confidence 345689999999999999999999999999887655 45678899999999999999988877 99999999999984
Q ss_pred CCe-----eeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEE----EEEecCCCCEEEEEEcCCCCEEEEEeC
Q 044075 626 QYS-----CARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLT----HSFKGHSTEIHSVCWDTNGEYLASVSQ 696 (786)
Q Consensus 626 ~~~-----~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i----~~l~~h~~~I~sv~~spdg~~Lasgs~ 696 (786)
.++ .+..++...+++.|+|.++.|++|+....|.||-++...-- +.-+.+.+.|+++.|+|++-+|++|+.
T Consensus 87 ~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~ 166 (361)
T KOG1523|consen 87 GGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGST 166 (361)
T ss_pred CCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceeccccc
Confidence 332 23456688999999999999999999999999988765322 122346788999999999999999999
Q ss_pred C-eEEEEECC-----C-------------CeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe--EEEEc
Q 044075 697 D-SVRVWSLA-----S-------------GECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK--CMTIA 755 (786)
Q Consensus 697 D-~I~vwDl~-----s-------------~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~--~~~~~ 755 (786)
| ..+||..- . |..+.++....+.+..+.|+|+|..|+-.+.|..+.+-|..... .....
T Consensus 167 D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~ 246 (361)
T KOG1523|consen 167 DGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVA 246 (361)
T ss_pred CcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchh
Confidence 9 88887542 1 23444555567889999999999999999999999999987664 22332
Q ss_pred ccCCCeEEEEEcCC
Q 044075 756 AHDCVISALAQSPV 769 (786)
Q Consensus 756 ~h~~~V~slafspd 769 (786)
...-+..++.|-.+
T Consensus 247 ~~~lP~ls~~~ise 260 (361)
T KOG1523|consen 247 TAQLPLLSVSWISE 260 (361)
T ss_pred hccCCceeeEeecC
Confidence 22356666666543
No 221
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.53 E-value=2.9e-12 Score=145.49 Aligned_cols=220 Identities=15% Similarity=0.162 Sum_probs=155.5
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEEC---CCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEE-eCCC--cEE
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAGH---DKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATS-SFDK--TVR 576 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs~---Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasg-s~Dg--~I~ 576 (786)
..+..+...+.+.+|||||+.|+..+. +..|++|++.+++.... ......+..++|+|||+.|+.. +.+| .|+
T Consensus 192 ~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~ 270 (429)
T PRK03629 192 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLY 270 (429)
T ss_pred EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEECCCCCEEEEEEcCCCCcEEE
Confidence 344556778999999999999987642 45799999988754332 2233345578999999988765 4455 488
Q ss_pred EEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCc--EEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEE
Q 044075 577 IWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSE--IRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAA 652 (786)
Q Consensus 577 VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~--I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~g 652 (786)
+||+.++. ...+..+...+....|+|+++.++++...++. |+++|+.++....... .......|+|+|++++..
T Consensus 271 ~~d~~tg~--~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~ 348 (429)
T PRK03629 271 VMDLASGQ--IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMV 348 (429)
T ss_pred EEECCCCC--EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEE
Confidence 89998765 34444455677899999999988877766555 4455676655444322 334568899999998887
Q ss_pred ECC---CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEEE
Q 044075 653 ASE---NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCIF 725 (786)
Q Consensus 653 s~d---g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~f 725 (786)
+.+ ..|++||+.+++... +.. ........|+|||++|+..+.+ .+.++++ ++.....+..+.+.+...+|
T Consensus 349 ~~~~g~~~I~~~dl~~g~~~~-Lt~-~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~~p~W 425 (429)
T PRK03629 349 SSNGGQQHIAKQDLATGGVQV-LTD-TFLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPAW 425 (429)
T ss_pred EccCCCceEEEEECCCCCeEE-eCC-CCCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcCCccc
Confidence 654 358899998886443 332 1223467899999999988866 3677787 45556667777788888888
Q ss_pred eCC
Q 044075 726 HPS 728 (786)
Q Consensus 726 spd 728 (786)
+|-
T Consensus 426 sp~ 428 (429)
T PRK03629 426 SPY 428 (429)
T ss_pred CCC
Confidence 873
No 222
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.52 E-value=1.6e-12 Score=147.89 Aligned_cols=221 Identities=18% Similarity=0.221 Sum_probs=158.0
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECC---CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEE-EEeCCC--c
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHD---KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLA-TSSFDK--T 574 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~D---g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~La-sgs~Dg--~ 574 (786)
..+.+..|...|.+.+|+|||+.|+.++.+ ..|++||+.+++... +..+.+...++.|+|||+.|+ +.+.+| .
T Consensus 195 ~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~ 273 (433)
T PRK04922 195 NPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRLALTLSRDGNPE 273 (433)
T ss_pred CceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEEEEEEeCCCCce
Confidence 344566678889999999999999987743 469999998876543 333444566889999998775 445555 5
Q ss_pred EEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCc--EEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEE
Q 044075 575 VRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSE--IRFWNLSQYSCARISK--GGTVQVRFQPRLGLLL 650 (786)
Q Consensus 575 I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~--I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll 650 (786)
|++||+.++. ...+..+.......+|+|++..++++...+|. |+++|+.+++...... ......+|+|++++++
T Consensus 274 Iy~~d~~~g~--~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG~~Ia 351 (433)
T PRK04922 274 IYVMDLGSRQ--LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNARASVSPDGKKIA 351 (433)
T ss_pred EEEEECCCCC--eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEE
Confidence 9999998765 44455565566788999999988877766665 6677777665544332 2334689999999998
Q ss_pred EEECCC---eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEE
Q 044075 651 AAASEN---VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSC 723 (786)
Q Consensus 651 ~gs~dg---~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv 723 (786)
..+.++ .|.+||+.+++.. .+. +........|+|||++|+..+.+ .|.++++.. .....+..+.+.+...
T Consensus 352 ~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g-~~~~~l~~~~g~~~~p 428 (433)
T PRK04922 352 MVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDG-RVRQRLVSADGEVREP 428 (433)
T ss_pred EEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCC-CceEEcccCCCCCCCC
Confidence 876543 6999999887655 333 33345567999999988777653 588888854 4455555555667777
Q ss_pred EEeC
Q 044075 724 IFHP 727 (786)
Q Consensus 724 ~fsp 727 (786)
+|+|
T Consensus 429 ~wsp 432 (433)
T PRK04922 429 AWSP 432 (433)
T ss_pred ccCC
Confidence 7776
No 223
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.50 E-value=2.1e-12 Score=146.56 Aligned_cols=222 Identities=18% Similarity=0.224 Sum_probs=155.0
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEECC---CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEE-EEeCCCcEEEE
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAGHD---KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLA-TSSFDKTVRIW 578 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs~D---g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~La-sgs~Dg~I~VW 578 (786)
..+..+...|.+.+|+|||+.|+..+.+ ..|++||+.+++... +....+.+.+.+|+||++.|+ +.+.++...||
T Consensus 189 ~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy 267 (427)
T PRK02889 189 QSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIY 267 (427)
T ss_pred eEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceEE
Confidence 3445677889999999999999887643 359999999886543 333445567899999999876 45778877777
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeC--CCCeeeEee-c-CCeEEEEEeCCCCEEEEEEC
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNL--SQYSCARIS-K-GGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl--~~~~~~~~~-~-~~i~~i~~sp~g~~Ll~gs~ 654 (786)
.++........+..+...+.+..|+|+|+.+++++..++...+|.+ ..+...... . .......|+|+|++++..+.
T Consensus 268 ~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~ 347 (427)
T PRK02889 268 TVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLLAYISR 347 (427)
T ss_pred EEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEEEEEEc
Confidence 5543222245555566666788999999998877766666666654 444433332 2 22345789999999988776
Q ss_pred CC---eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEEEeC
Q 044075 655 EN---VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCIFHP 727 (786)
Q Consensus 655 dg---~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~fsp 727 (786)
++ .|++||+.+++...... ......+.|+|||++|+..+.+ .+.+.++ ++.....+..+.+.+...+|+|
T Consensus 348 ~~g~~~I~v~d~~~g~~~~lt~--~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p~wsp 424 (427)
T PRK02889 348 VGGAFKLYVQDLATGQVTALTD--TTRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRLSVQGGDVREPSWGP 424 (427)
T ss_pred cCCcEEEEEEECCCCCeEEccC--CCCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEeecCCCCCCCCccCC
Confidence 54 69999998886543322 2334678999999998887754 3666676 4555666655667777778876
Q ss_pred C
Q 044075 728 S 728 (786)
Q Consensus 728 d 728 (786)
-
T Consensus 425 ~ 425 (427)
T PRK02889 425 F 425 (427)
T ss_pred C
Confidence 3
No 224
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.50 E-value=2.9e-11 Score=132.39 Aligned_cols=268 Identities=15% Similarity=0.282 Sum_probs=182.2
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEE-----eC-----CCcEEEEc
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATS-----SF-----DKTVRIWD 579 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasg-----s~-----Dg~I~VWd 579 (786)
..++..++|++|+++|.+ .+..|+|++..+.+.+.+.... .++++.|+|-+++|.+= .. .-.+.+|+
T Consensus 35 ~~~~v~~~S~~G~lfA~~-~~~~v~i~~~~~~~~~lt~~~~--~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~ 111 (566)
T KOG2315|consen 35 RPCNVFAYSNNGRLFAYS-DNQVVKVFEIATLKVVLCVELK--KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYN 111 (566)
T ss_pred CcceeEEEcCCCcEEEEE-cCCeEEEEEccCCcEEEEeccc--eeeeeeecccccccccccccccccCCCCCCCceeeee
Confidence 347788899999988887 4778999999988655554433 68999999999888752 11 23467888
Q ss_pred CCCCcceeeee----------------------------------------cCCCCCeEEEEEecCC-CeEEEE-----E
Q 044075 580 AAKPNFCLQTY----------------------------------------TGHNNHVMSLDFHPKK-NDLFCS-----C 613 (786)
Q Consensus 580 l~s~~~~~~~~----------------------------------------~~h~~~V~sl~~sp~g-~~ll~s-----g 613 (786)
++++. ....+ .-|...|..+.++|.. ...+|+ .
T Consensus 112 vet~~-~~s~~q~k~Q~~W~~qfs~dEsl~arlv~nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~k 190 (566)
T KOG2315|consen 112 VETGV-QRSQIQKKMQNGWVPQFSIDESLAARLVSNEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKK 190 (566)
T ss_pred eccce-ehhheehhhhcCcccccccchhhhhhhhcceEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEccCCC
Confidence 87622 11000 1134556666676652 222222 1
Q ss_pred cCCCcEEEEeCCCCe------eeEeecCCeEEEEEeCCCCEEEEE-EC--C---------CeEEEEEcCCCcEEEEEecC
Q 044075 614 DGNSEIRFWNLSQYS------CARISKGGTVQVRFQPRLGLLLAA-AS--E---------NVVSIFDVETDRLTHSFKGH 675 (786)
Q Consensus 614 s~Dg~I~iwDl~~~~------~~~~~~~~i~~i~~sp~g~~Ll~g-s~--d---------g~I~iwD~~t~~~i~~l~~h 675 (786)
+.-+.|++|.+.... ....++..-..+.|++.+.-|++. +. | ..++++++....+...+. .
T Consensus 191 GaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~-k 269 (566)
T KOG2315|consen 191 GAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLL-K 269 (566)
T ss_pred CCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecC-C
Confidence 334567777765221 223344566677888877654333 22 2 368888888545555554 5
Q ss_pred CCCEEEEEEcCCCCEEEEEeCC---eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCCC
Q 044075 676 STEIHSVCWDTNGEYLASVSQD---SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY---QSLELWNMAEN 749 (786)
Q Consensus 676 ~~~I~sv~~spdg~~Lasgs~D---~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d---g~I~IwDl~~~ 749 (786)
.++|.+++|+++++-|+++..= ++.|||++- +.+..+ ..++-.++-|+|.|++|+.+|-+ |.|.|||+.+.
T Consensus 270 ~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~-~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~ 346 (566)
T KOG2315|consen 270 EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG-KPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNR 346 (566)
T ss_pred CCCceEEEECCCCCEEEEEEecccceEEEEcCCC-CEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccch
Confidence 7899999999999887776543 899999873 344443 56788899999999999998876 69999999997
Q ss_pred eEEEEcccCCCeEEEEEcCCCCEEEEEeC------CCcEEEeC
Q 044075 750 KCMTIAAHDCVISALAQSPVTGMVASASH------DKSVKIWK 786 (786)
Q Consensus 750 ~~~~~~~h~~~V~slafspdg~~LaSgs~------DG~I~IWd 786 (786)
+++...... .-+-+.|+|||.+|+|++. |+.++||+
T Consensus 347 K~i~~~~a~-~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwh 388 (566)
T KOG2315|consen 347 KLIAKFKAA-NTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWH 388 (566)
T ss_pred hhccccccC-CceEEEEcCCCcEEEEEeccccEEecCCeEEEE
Confidence 776443322 2345899999999998875 67899985
No 225
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.49 E-value=6.4e-14 Score=157.77 Aligned_cols=245 Identities=21% Similarity=0.304 Sum_probs=189.2
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
+-.++.+++||.+.|+.++.+.+.-++|+++.|..|++|.+.++.++..+.+|++.|++|+|+|-- +.+.||++++
T Consensus 221 t~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~ 296 (1113)
T KOG0644|consen 221 TARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRI 296 (1113)
T ss_pred chhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEe
Confidence 345778999999999999999999999999999999999999999999999999999999999854 7788999999
Q ss_pred EcCCC-Cc-ceeeeec-CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCC-CEEEEEE
Q 044075 578 WDAAK-PN-FCLQTYT-GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRL-GLLLAAA 653 (786)
Q Consensus 578 Wdl~s-~~-~~~~~~~-~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g-~~Ll~gs 653 (786)
||.+- .. +...-.. .....+.++.|..++..+ .+++.|+.-..|.+....+... ...-+.++.+- .+.+++-
T Consensus 297 wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f-~Tgs~d~ea~n~e~~~l~~~~~---~lif~t~ssd~~~~~~~ar 372 (1113)
T KOG0644|consen 297 WDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRF-LTGSRDGEARNHEFEQLAWRSN---LLIFVTRSSDLSSIVVTAR 372 (1113)
T ss_pred ccccccccccCCCCCCcccccceeeeecccccccc-ccccCCcccccchhhHhhhhcc---ceEEEeccccccccceeee
Confidence 99872 11 0001111 122456666666655544 4899999988887654322111 11111111121 3555666
Q ss_pred CCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCC-CEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCE
Q 044075 654 SENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNG-EYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPT 731 (786)
Q Consensus 654 ~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg-~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~ 731 (786)
.+-.+++|++-++.+.+.+.+|...+..+.++|-. ....+++.| ...|||+-.+.+++.+......+...+|+++|..
T Consensus 373 ~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts 452 (1113)
T KOG0644|consen 373 NDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTS 452 (1113)
T ss_pred eeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCCCce
Confidence 67889999999999999999999999999999955 445677778 9999999999888777666788899999999999
Q ss_pred EEEEECCCeEEEEECCCCe
Q 044075 732 LMVIGGYQSLELWNMAENK 750 (786)
Q Consensus 732 L~sgs~dg~I~IwDl~~~~ 750 (786)
++....-|.++|.....++
T Consensus 453 ~~lsd~hgql~i~g~gqs~ 471 (1113)
T KOG0644|consen 453 IALSDDHGQLYILGTGQSK 471 (1113)
T ss_pred EecCCCCCceEEeccCCCc
Confidence 9999888999998776554
No 226
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.49 E-value=2.1e-10 Score=126.66 Aligned_cols=259 Identities=12% Similarity=0.196 Sum_probs=180.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEEC----CCeEEEEEcCCC--e--eeeecCCCCCCeEEEEEccCCCEEEEEeC-CCcEEEE
Q 044075 508 SSSKVTCCHFSSDGKLLASAGH----DKKVVVWNMENF--Q--TECTPDDHNHIITDVRFRPNSTQLATSSF-DKTVRIW 578 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~----Dg~V~IWdl~t~--~--~~~~l~~h~~~V~sl~fspdg~~Lasgs~-Dg~I~VW 578 (786)
.......++++|++++|++... ++.|..|++... + .+............++++|++++|+++.+ +|+|.++
T Consensus 35 ~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~ 114 (345)
T PF10282_consen 35 EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVF 114 (345)
T ss_dssp ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEE
Confidence 3445778999999999999876 568999998764 2 33333323445678999999999999886 8999999
Q ss_pred cCCCCcceeee---ec----------CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe--eeE--ee----cCCe
Q 044075 579 DAAKPNFCLQT---YT----------GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS--CAR--IS----KGGT 637 (786)
Q Consensus 579 dl~s~~~~~~~---~~----------~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~--~~~--~~----~~~i 637 (786)
++.....+... +. .......++.|+|++++++++.-....|.+|++.... ... .. ..+.
T Consensus 115 ~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GP 194 (345)
T PF10282_consen 115 PLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGP 194 (345)
T ss_dssp EECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSE
T ss_pred EccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCC
Confidence 99875322221 10 1235678999999999999877777899999997654 222 11 1567
Q ss_pred EEEEEeCCCCEEEEEEC-CCeEEEEEcC--CCc--EEEEEecC------CCCEEEEEEcCCCCEEEEEeCC--eEEEEEC
Q 044075 638 VQVRFQPRLGLLLAAAS-ENVVSIFDVE--TDR--LTHSFKGH------STEIHSVCWDTNGEYLASVSQD--SVRVWSL 704 (786)
Q Consensus 638 ~~i~~sp~g~~Ll~gs~-dg~I~iwD~~--t~~--~i~~l~~h------~~~I~sv~~spdg~~Lasgs~D--~I~vwDl 704 (786)
..+.|+|+++++++..+ ++.|.+|++. ++. .+..+... ......|+++|||++|++...+ .|.+|++
T Consensus 195 Rh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~ 274 (345)
T PF10282_consen 195 RHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDL 274 (345)
T ss_dssp EEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEE
T ss_pred cEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEE
Confidence 88999999999888876 6889999988 442 23333211 2257889999999999888765 8999999
Q ss_pred C--CC--eeEEEEccCCCceEEEEEeCCCCEEEEEECC-CeEEEEEC--CCCeEEEEc--ccCCCeEEEEE
Q 044075 705 A--SG--ECIHELSSSGNKFHSCIFHPSYPTLMVIGGY-QSLELWNM--AENKCMTIA--AHDCVISALAQ 766 (786)
Q Consensus 705 ~--s~--~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d-g~I~IwDl--~~~~~~~~~--~h~~~V~slaf 766 (786)
. ++ +.+..+.......+.+.++|++++|+++..+ +.|.+|++ .++.+.... ..-....||.|
T Consensus 275 d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 275 DPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp CTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred ecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence 4 23 3445555555668999999999999998854 58888866 566655333 23445666665
No 227
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.49 E-value=1.1e-11 Score=140.16 Aligned_cols=230 Identities=15% Similarity=0.173 Sum_probs=161.7
Q ss_pred CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC---CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCC
Q 044075 531 KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFD---KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKN 607 (786)
Q Consensus 531 g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D---g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~ 607 (786)
..|.++|..... ...+..+...+.+.+|+||+++|+.++.+ ..|++||+.++.. ..+..+...+.+++|+|+++
T Consensus 170 ~~l~~~d~~g~~-~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~--~~~~~~~~~~~~~~~spDg~ 246 (417)
T TIGR02800 170 YELQVADYDGAN-PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQR--EKVASFPGMNGAPAFSPDGS 246 (417)
T ss_pred ceEEEEcCCCCC-CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCE--EEeecCCCCccceEECCCCC
Confidence 368888876443 44455667789999999999999887754 4799999988652 33344556677899999999
Q ss_pred eEEEEEcCCC--cEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECC-C--eEEEEEcCCCcEEEEEecCCCCEE
Q 044075 608 DLFCSCDGNS--EIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASE-N--VVSIFDVETDRLTHSFKGHSTEIH 680 (786)
Q Consensus 608 ~ll~sgs~Dg--~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~d-g--~I~iwD~~t~~~i~~l~~h~~~I~ 680 (786)
.++++.+.++ .|++||+.++....... .......|+++++.|+.++.. + .|+++|+.+++.. .+..+...+.
T Consensus 247 ~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~ 325 (417)
T TIGR02800 247 KLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNA 325 (417)
T ss_pred EEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCcc
Confidence 8887776554 58899998776544433 233467899999998877653 2 6888898877643 3443556677
Q ss_pred EEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCC---eEEEEECCCCeEEE
Q 044075 681 SVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ---SLELWNMAENKCMT 753 (786)
Q Consensus 681 sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg---~I~IwDl~~~~~~~ 753 (786)
.+.|+|+|++|+.++.+ .|.+||+.++... .+... .......|+|++++|+..+.++ .+++.+........
T Consensus 326 ~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~g~~~~~ 403 (417)
T TIGR02800 326 SPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDT-GLDESPSFAPNGRMILYATTRGGRGVLGLVSTDGRFRAR 403 (417)
T ss_pred CeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCC-CCCCCceECCCCCEEEEEEeCCCcEEEEEEECCCceeeE
Confidence 88999999999887754 6889999876432 23222 2345568999999998887764 46666766555544
Q ss_pred EcccCCCeEEEEE
Q 044075 754 IAAHDCVISALAQ 766 (786)
Q Consensus 754 ~~~h~~~V~slaf 766 (786)
+..+.+.+..++|
T Consensus 404 ~~~~~g~~~~~~w 416 (417)
T TIGR02800 404 LPLGNGDVREPAW 416 (417)
T ss_pred CCCCCCCcCCCCC
Confidence 5444555655555
No 228
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.48 E-value=2.2e-13 Score=147.57 Aligned_cols=211 Identities=18% Similarity=0.333 Sum_probs=158.7
Q ss_pred eeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecC-CCeEEEEEcCCCcEE
Q 044075 542 QTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPK-KNDLFCSCDGNSEIR 620 (786)
Q Consensus 542 ~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~-g~~ll~sgs~Dg~I~ 620 (786)
.....+.+|.+.|.|+.|+.+|.+|++|+.|-.+.|||.-..+.....-++|...|.|+.|.|. ++.++++|..|..|+
T Consensus 41 ~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~ 120 (758)
T KOG1310|consen 41 DLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK 120 (758)
T ss_pred chhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence 3456788999999999999999999999999999999998777656677899999999999985 567888999999999
Q ss_pred EEeCCCCee----------e---EeecCCeEEEEEeCCC-CEEEEEECCCeEEEEEcCCCcEEE----------EEecCC
Q 044075 621 FWNLSQYSC----------A---RISKGGTVQVRFQPRL-GLLLAAASENVVSIFDVETDRLTH----------SFKGHS 676 (786)
Q Consensus 621 iwDl~~~~~----------~---~~~~~~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t~~~i~----------~l~~h~ 676 (786)
+||+...+. . ..+...+..++..|++ ..+.+++.||+|+-||++...... .+...-
T Consensus 121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~l 200 (758)
T KOG1310|consen 121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQL 200 (758)
T ss_pred EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhh
Confidence 999985221 1 1122455667788888 779999999999999998642111 111122
Q ss_pred CCEEEEEEcCC-CCEEEEEeCC-eEEEEECCC--------C----------eeEEEEcc-C--------C---CceEEEE
Q 044075 677 TEIHSVCWDTN-GEYLASVSQD-SVRVWSLAS--------G----------ECIHELSS-S--------G---NKFHSCI 724 (786)
Q Consensus 677 ~~I~sv~~spd-g~~Lasgs~D-~I~vwDl~s--------~----------~~i~~l~~-~--------~---~~I~sv~ 724 (786)
-...|+.++|. ..+|++|+.| ..++||.+. + .|+..+.. | . ..++-+.
T Consensus 201 ielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vt 280 (758)
T KOG1310|consen 201 IELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVT 280 (758)
T ss_pred heeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEE
Confidence 35678899985 5688899999 999999542 1 12333221 1 0 1245678
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 725 FHPSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 725 fspdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
|+|+|..|++.-....|++||+..++..
T Consensus 281 fnpNGtElLvs~~gEhVYlfdvn~~~~~ 308 (758)
T KOG1310|consen 281 FNPNGTELLVSWGGEHVYLFDVNEDKSP 308 (758)
T ss_pred ECCCCcEEEEeeCCeEEEEEeecCCCCc
Confidence 9999998888877779999999887643
No 229
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.48 E-value=4.5e-12 Score=148.46 Aligned_cols=249 Identities=16% Similarity=0.280 Sum_probs=177.7
Q ss_pred EEcCCCeeeeecCCCCCCeEEEEEccCC-CEEEEEeCCCcEEEEcCCCCcc------eeeeecCCCCCeEEEEEecCCCe
Q 044075 536 WNMENFQTECTPDDHNHIITDVRFRPNS-TQLATSSFDKTVRIWDAAKPNF------CLQTYTGHNNHVMSLDFHPKKND 608 (786)
Q Consensus 536 Wdl~t~~~~~~l~~h~~~V~sl~fspdg-~~Lasgs~Dg~I~VWdl~s~~~------~~~~~~~h~~~V~sl~~sp~g~~ 608 (786)
|+. .|..+..+..|...|..++.++.. .+|++|+.||+|++|+...-.. ...++....+.+.++...+.++.
T Consensus 1034 W~p-~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~ 1112 (1431)
T KOG1240|consen 1034 WNP-RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ 1112 (1431)
T ss_pred CCc-cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe
Confidence 443 478888899999999999998755 8999999999999999864221 12234445678999999988887
Q ss_pred EEEEEcCCCcEEEEeCCCCee-------eEeec----CCeEEEE-EeC-CCC-EEEEEECCCeEEEEEcCCCcEEEEEec
Q 044075 609 LFCSCDGNSEIRFWNLSQYSC-------ARISK----GGTVQVR-FQP-RLG-LLLAAASENVVSIFDVETDRLTHSFKG 674 (786)
Q Consensus 609 ll~sgs~Dg~I~iwDl~~~~~-------~~~~~----~~i~~i~-~sp-~g~-~Ll~gs~dg~I~iwD~~t~~~i~~l~~ 674 (786)
++ .++.||.|.+.+++..+. .+..+ +.+..+. +.. ... .++.++.-+.|..||+++.....+++.
T Consensus 1113 ~A-v~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~ 1191 (1431)
T KOG1240|consen 1113 FA-VSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKN 1191 (1431)
T ss_pred EE-EEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhc
Confidence 66 558899999999876221 11111 3333332 222 223 677777889999999998866655543
Q ss_pred --CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc-CCCceEEEEEeCCCC---EEEEEE--CCCeEEEEE
Q 044075 675 --HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS-SGNKFHSCIFHPSYP---TLMVIG--GYQSLELWN 745 (786)
Q Consensus 675 --h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~-~~~~I~sv~fspdg~---~L~sgs--~dg~I~IwD 745 (786)
..+.|++++.+|.+.++++|+.. .+.+||++-+.++..+.. +..+|..+..+|-.+ ..++++ ..+.|.+|+
T Consensus 1192 ~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn 1271 (1431)
T KOG1240|consen 1192 QLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWN 1271 (1431)
T ss_pred CccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeee
Confidence 45789999999999999999988 999999999888877653 346677777666443 444444 456899999
Q ss_pred CCCCeEEEEcc--------------------cCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 746 MAENKCMTIAA--------------------HDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 746 l~~~~~~~~~~--------------------h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+.++.+..... +.-....+++..-+.++.+|+.|+.|+.||
T Consensus 1272 ~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD 1332 (1431)
T KOG1240|consen 1272 METGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWD 1332 (1431)
T ss_pred cccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeecc
Confidence 99886542211 111222334444566899999999999998
No 230
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.47 E-value=9.7e-12 Score=141.64 Aligned_cols=221 Identities=15% Similarity=0.184 Sum_probs=157.4
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEEC---CCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEE-EEeCCCc--
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGH---DKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLA-TSSFDKT-- 574 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~---Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~La-sgs~Dg~-- 574 (786)
..+.+..|...|.+.+|+|||+.|+..+. +..|++||+.+++.. .+..+.+.+.+.+|+|||+.|+ +.+.++.
T Consensus 193 ~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~ 271 (435)
T PRK05137 193 NVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTD 271 (435)
T ss_pred CcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCce
Confidence 34456678889999999999999988764 468999999887653 4455666788999999998775 4555655
Q ss_pred EEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC--cEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEE
Q 044075 575 VRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS--EIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLL 650 (786)
Q Consensus 575 I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg--~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll 650 (786)
|++||+.++. ...+..+.....+..|+|+++.++++...+| .|++||+..+....... +......|+|+++.|+
T Consensus 272 Iy~~d~~~~~--~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~~~~SpdG~~ia 349 (435)
T PRK05137 272 IYTMDLRSGT--TTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGGRYSTPVWSPRGDLIA 349 (435)
T ss_pred EEEEECCCCc--eEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCCcccCeEECCCCCEEE
Confidence 7777887765 4556666666778999999998887765554 68888988766555433 4456688999999998
Q ss_pred EEECC---CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-------eEEEEECCCCeeEEEEccCCCce
Q 044075 651 AAASE---NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-------SVRVWSLASGECIHELSSSGNKF 720 (786)
Q Consensus 651 ~gs~d---g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-------~I~vwDl~s~~~i~~l~~~~~~I 720 (786)
....+ ..|.+||+..+.. ..+. ....+..+.|+|||+.|+..+.+ .+.++|+..+.. ..+.. ...+
T Consensus 350 ~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~~-~~~~ 425 (435)
T PRK05137 350 FTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVPT-PGDA 425 (435)
T ss_pred EEEcCCCceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEccC-CCCc
Confidence 87754 3688899865543 3333 23356788999999988775542 367778765544 34432 3446
Q ss_pred EEEEEeCC
Q 044075 721 HSCIFHPS 728 (786)
Q Consensus 721 ~sv~fspd 728 (786)
...+|+|-
T Consensus 426 ~~p~Wsp~ 433 (435)
T PRK05137 426 SDPAWSPL 433 (435)
T ss_pred cCcccCCC
Confidence 66677663
No 231
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.46 E-value=2.8e-11 Score=137.72 Aligned_cols=232 Identities=13% Similarity=0.101 Sum_probs=163.1
Q ss_pred eEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC---CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCe
Q 044075 532 KVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFD---KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKND 608 (786)
Q Consensus 532 ~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D---g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ 608 (786)
.|.++|.+... ...+..+...+....|+|||+.|+..+.+ ..|.+||+.++.. ..+....+.+....|+|+|+.
T Consensus 180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~--~~l~~~~g~~~~~~~SpDG~~ 256 (430)
T PRK00178 180 TLQRSDYDGAR-AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRR--EQITNFEGLNGAPAWSPDGSK 256 (430)
T ss_pred EEEEECCCCCC-ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCE--EEccCCCCCcCCeEECCCCCE
Confidence 47777877544 34555667789999999999998877654 3689999987652 333333445667899999999
Q ss_pred EEEEEcCCC--cEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECC---CeEEEEEcCCCcEEEEEecCCCCEEE
Q 044075 609 LFCSCDGNS--EIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASE---NVVSIFDVETDRLTHSFKGHSTEIHS 681 (786)
Q Consensus 609 ll~sgs~Dg--~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~d---g~I~iwD~~t~~~i~~l~~h~~~I~s 681 (786)
++++.+.++ .|++||+.++....... .......|+|+++.++..+.. ..|+++|+.+++...... .......
T Consensus 257 la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~-~~~~~~~ 335 (430)
T PRK00178 257 LAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTF-VGNYNAR 335 (430)
T ss_pred EEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec-CCCCccc
Confidence 987776665 68888998876654433 334567899999988777653 368888888776443222 2233445
Q ss_pred EEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCCCeEEEE
Q 044075 682 VCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY---QSLELWNMAENKCMTI 754 (786)
Q Consensus 682 v~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d---g~I~IwDl~~~~~~~~ 754 (786)
..|+|+|++|+..+.+ .|.+||+.+++.. .+.. ........|+|+|+.++..+.+ ..|+++++.......+
T Consensus 336 ~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~-~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~~~~~l 413 (430)
T PRK00178 336 PRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTD-TSLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGRVRLPL 413 (430)
T ss_pred eEECCCCCEEEEEEccCCceEEEEEECCCCCEE-EccC-CCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEEC
Confidence 7899999999877643 5889999887643 3322 2223356899999999887755 3688888876665556
Q ss_pred cccCCCeEEEEEcCC
Q 044075 755 AAHDCVISALAQSPV 769 (786)
Q Consensus 755 ~~h~~~V~slafspd 769 (786)
..+.+.+...+|+|-
T Consensus 414 ~~~~g~~~~p~ws~~ 428 (430)
T PRK00178 414 PTAQGEVREPSWSPY 428 (430)
T ss_pred cCCCCCcCCCccCCC
Confidence 566677888888874
No 232
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.46 E-value=3.4e-12 Score=134.65 Aligned_cols=264 Identities=16% Similarity=0.170 Sum_probs=173.5
Q ss_pred eEeccCCCCceeeeccccCCCcccc--cccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeee
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQAT--ETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTE 544 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~ 544 (786)
+++..+++|..++|........... .....-.|...+.+++|...|..++|+||+.++++++.|..+++||+..+...
T Consensus 79 lLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~ 158 (434)
T KOG1009|consen 79 LLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLL 158 (434)
T ss_pred eeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeE
Confidence 4556666677777765532221111 12223458888999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCC-CeEEEEEecCCCeEEEEEcCCCcEEEEe
Q 044075 545 CTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNN-HVMSLDFHPKKNDLFCSCDGNSEIRFWN 623 (786)
Q Consensus 545 ~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~-~V~sl~~sp~g~~ll~sgs~Dg~I~iwD 623 (786)
..+..|...|..++|.|-+.++++-+.|...+++.+..... + ..|.. .+..-++++. .....++|.
T Consensus 159 ~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~-~---~~~~~~~m~~~~~~~~---------e~~s~rLfh 225 (434)
T KOG1009|consen 159 AILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQV-I---KRHGLDIMPAKAFNER---------EGKSTRLFH 225 (434)
T ss_pred eeccccccccceeecchhhhhhhhhccCcccceeeeeeeee-e---eeeeeeEeeecccCCC---------Ccceeeeee
Confidence 99999999999999999999999999998777777654331 1 11110 0011111110 011122222
Q ss_pred CCCCeeeEeecCCeEEEEEeCCCCEEEEEEC----C-----CeEEEEEcCCC-cEEEEEecCCCCEEEEEEc--------
Q 044075 624 LSQYSCARISKGGTVQVRFQPRLGLLLAAAS----E-----NVVSIFDVETD-RLTHSFKGHSTEIHSVCWD-------- 685 (786)
Q Consensus 624 l~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~----d-----g~I~iwD~~t~-~~i~~l~~h~~~I~sv~~s-------- 685 (786)
-++.+ .-...++|+|+|..+++.+. + +..++|+-... +++..+.....++..+.|+
T Consensus 226 DeTlk------sFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp 299 (434)
T KOG1009|consen 226 DETLK------SFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRP 299 (434)
T ss_pred cCchh------hhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEecc
Confidence 22111 11234566777766665432 1 23345544322 3444444444444444443
Q ss_pred ----------CCCCEEEEEeCCeEEEEECCCCeeEEEEc-cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC
Q 044075 686 ----------TNGEYLASVSQDSVRVWSLASGECIHELS-SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 686 ----------pdg~~Lasgs~D~I~vwDl~s~~~i~~l~-~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~ 749 (786)
|.+..++.++.+.|+|||..+.+++.... .|-..|+.++|+++|.+++..+.||-..+.-++..
T Consensus 300 ~~~~~~~~~lpyrlvfaiAt~~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~ 374 (434)
T KOG1009|consen 300 LSSEKFLFVLPYRLVFAIATKNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPW 374 (434)
T ss_pred ccccccccccccceEEEEeecceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcch
Confidence 33456788888999999999877665543 46788999999999999999999996665555443
No 233
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.46 E-value=2.3e-11 Score=125.09 Aligned_cols=226 Identities=14% Similarity=0.212 Sum_probs=163.1
Q ss_pred CeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCC--CeEEEEEecCCCeEEEEEcCC------CcEEEEeC
Q 044075 553 IITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNN--HVMSLDFHPKKNDLFCSCDGN------SEIRFWNL 624 (786)
Q Consensus 553 ~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~--~V~sl~~sp~g~~ll~sgs~D------g~I~iwDl 624 (786)
...+++|+.|...+++|.++| .+||+.+--+.. .....+.+ .+..+-| ..+.+.+.|+.+ ..|.|||-
T Consensus 7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~-~~r~~~~~G~~~veMLf--R~N~laLVGGg~~pky~pNkviIWDD 82 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKES-ASRQFIDGGFKIVEMLF--RSNYLALVGGGSRPKYPPNKVIIWDD 82 (346)
T ss_pred ceeEEEEccCCceEEEEecCc-eEEEecCchhhh-hhhccccCchhhhhHhh--hhceEEEecCCCCCCCCCceEEEEec
Confidence 345699999999898888666 899988653311 11111112 2222223 235555566544 57999996
Q ss_pred CCCeeeEe--ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCC-CcEEEEEec--CCCCEEEEEEcCCCCEEEEEeCC--
Q 044075 625 SQYSCARI--SKGGTVQVRFQPRLGLLLAAASENVVSIFDVET-DRLTHSFKG--HSTEIHSVCWDTNGEYLASVSQD-- 697 (786)
Q Consensus 625 ~~~~~~~~--~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t-~~~i~~l~~--h~~~I~sv~~spdg~~Lasgs~D-- 697 (786)
....++.. +...|..+++..+ .+ +.-.++.|+||...+ .+.++.+.. ....+.+++-..+..+|+.-+..
T Consensus 83 ~k~~~i~el~f~~~I~~V~l~r~--ri-Vvvl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~G 159 (346)
T KOG2111|consen 83 LKERCIIELSFNSEIKAVKLRRD--RI-VVVLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTG 159 (346)
T ss_pred ccCcEEEEEEeccceeeEEEcCC--eE-EEEecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccc
Confidence 66666554 4488888888875 34 444568999999884 466666654 23345555544456677766655
Q ss_pred eEEEEECCCCee--EEEEccCCCceEEEEEeCCCCEEEEEECCCe-EEEEECCCCeEEEE-c--ccCCCeEEEEEcCCCC
Q 044075 698 SVRVWSLASGEC--IHELSSSGNKFHSCIFHPSYPTLMVIGGYQS-LELWNMAENKCMTI-A--AHDCVISALAQSPVTG 771 (786)
Q Consensus 698 ~I~vwDl~s~~~--i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~-I~IwDl~~~~~~~~-~--~h~~~V~slafspdg~ 771 (786)
.|.|-|+...+. ...+..|.+.|.+++.+-+|..+++++..|+ |+|||..++..+.. . .....|.+++|||+..
T Consensus 160 qvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s 239 (346)
T KOG2111|consen 160 QVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSS 239 (346)
T ss_pred eEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCcc
Confidence 799999987655 4788899999999999999999999999995 89999999987733 2 2456799999999999
Q ss_pred EEEEEeCCCcEEEe
Q 044075 772 MVASASHDKSVKIW 785 (786)
Q Consensus 772 ~LaSgs~DG~I~IW 785 (786)
+|+++|+-|+|+||
T Consensus 240 ~LavsSdKgTlHiF 253 (346)
T KOG2111|consen 240 WLAVSSDKGTLHIF 253 (346)
T ss_pred EEEEEcCCCeEEEE
Confidence 99999999999997
No 234
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.45 E-value=1.6e-13 Score=146.41 Aligned_cols=230 Identities=14% Similarity=0.171 Sum_probs=186.3
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee
Q 044075 551 NHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA 630 (786)
Q Consensus 551 ~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~ 630 (786)
...-..+.++.+|++|+.|+..|.|..+|..+... ...+ .-...|.++.|..+.. +| +......++|||-..-+..
T Consensus 129 eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L-~~Ei-~v~Etv~Dv~~LHneq-~~-AVAQK~y~yvYD~~GtElH 204 (545)
T KOG1272|consen 129 EFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKL-HFEI-NVMETVRDVTFLHNEQ-FF-AVAQKKYVYVYDNNGTELH 204 (545)
T ss_pred ccCCeeeeecCCccEEEecCCccceeeeeccccee-eeee-ehhhhhhhhhhhcchH-HH-HhhhhceEEEecCCCcEEe
Confidence 34457889999999999999999999999998762 2222 2346788999976544 44 3445788999997755443
Q ss_pred Eeec-CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe
Q 044075 631 RISK-GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE 708 (786)
Q Consensus 631 ~~~~-~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~ 708 (786)
+.-. ..+..+.|-|..-.|++++..|.+..-|+.+|+.+..+....+.+..++-+|-+-.+-+|..+ +|.+|...+.+
T Consensus 205 Clk~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~ske 284 (545)
T KOG1272|consen 205 CLKRHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKE 284 (545)
T ss_pred ehhhcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcc
Confidence 3322 667889999998888888889999999999999999998888889999999999899888888 99999999999
Q ss_pred eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 709 CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 709 ~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
++..+.+|.++|.++++.++|.|+++++.|..|+|||++....+.......+...++||..| ++.++....|.||.
T Consensus 285 PLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~Sqkg--lLA~~~G~~v~iw~ 360 (545)
T KOG1272|consen 285 PLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKG--LLALSYGDHVQIWK 360 (545)
T ss_pred hHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCcccccccccc--ceeeecCCeeeeeh
Confidence 99999999999999999999999999999999999999987644222225567888888655 44455566899994
No 235
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.45 E-value=5.1e-10 Score=123.57 Aligned_cols=263 Identities=16% Similarity=0.205 Sum_probs=179.2
Q ss_pred EEEEECC----CeEEEEEc--CCCeeeeec-CCCCCCeEEEEEccCCCEEEEEeC----CCcEEEEcCCCC-cc--eeee
Q 044075 524 LASAGHD----KKVVVWNM--ENFQTECTP-DDHNHIITDVRFRPNSTQLATSSF----DKTVRIWDAAKP-NF--CLQT 589 (786)
Q Consensus 524 Lasgs~D----g~V~IWdl--~t~~~~~~l-~~h~~~V~sl~fspdg~~Lasgs~----Dg~I~VWdl~s~-~~--~~~~ 589 (786)
+++|+.. +.|.+|++ ++++....- .........++++|++++|+++.. ++.|..|++... .. .+..
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~ 81 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNS 81 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeee
Confidence 4556655 68998888 344432211 123344667899999999999877 468999988765 21 1222
Q ss_pred ecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC-CeeeEe---e-------------cCCeEEEEEeCCCCEEEEE
Q 044075 590 YTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ-YSCARI---S-------------KGGTVQVRFQPRLGLLLAA 652 (786)
Q Consensus 590 ~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~-~~~~~~---~-------------~~~i~~i~~sp~g~~Ll~g 652 (786)
..........++++|++..++++...+|.|.++++.. +..... . ..+..++.++|+++++++.
T Consensus 82 ~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~ 161 (345)
T PF10282_consen 82 VPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVP 161 (345)
T ss_dssp EEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEE
T ss_pred eccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEE
Confidence 2223455678999999999998888999999999986 332221 1 1456789999999999988
Q ss_pred ECC-CeEEEEEcCCCc--EE--EEEe-cCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECC--CCe--eEEEEccC----
Q 044075 653 ASE-NVVSIFDVETDR--LT--HSFK-GHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLA--SGE--CIHELSSS---- 716 (786)
Q Consensus 653 s~d-g~I~iwD~~t~~--~i--~~l~-~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~--s~~--~i~~l~~~---- 716 (786)
... ..|.+|++.... +. ..+. ........+.|+|+++++++..+. .|.+|++. ++. .+..+...
T Consensus 162 dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 241 (345)
T PF10282_consen 162 DLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGF 241 (345)
T ss_dssp ETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTS
T ss_pred ecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccc
Confidence 763 689999997754 32 2232 355678899999999999888766 89999888 443 23333221
Q ss_pred --CCceEEEEEeCCCCEEEEEEC-CCeEEEEECC--CCeEE---EEcccCCCeEEEEEcCCCCEEEEEe-CCCcEEEeC
Q 044075 717 --GNKFHSCIFHPSYPTLMVIGG-YQSLELWNMA--ENKCM---TIAAHDCVISALAQSPVTGMVASAS-HDKSVKIWK 786 (786)
Q Consensus 717 --~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl~--~~~~~---~~~~h~~~V~slafspdg~~LaSgs-~DG~I~IWd 786 (786)
......+.++|++++|+++.. .+.|.+|+++ ++++. .+.........++++|+|++|++++ .++.|.+|+
T Consensus 242 ~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~ 320 (345)
T PF10282_consen 242 TGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFD 320 (345)
T ss_dssp CSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEE
T ss_pred cccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEE
Confidence 125788999999999888774 5689999994 34443 2223345589999999999998887 456888874
No 236
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.44 E-value=8.7e-11 Score=130.22 Aligned_cols=261 Identities=11% Similarity=0.119 Sum_probs=171.8
Q ss_pred CEE-EEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEE
Q 044075 522 KLL-ASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSL 600 (786)
Q Consensus 522 ~~L-asgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl 600 (786)
+++ ++-..++.|.|.|..+.+.+.++......-..+.|+||++++++++.||.|.++|+.+.+ .+..+.. .....++
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~-~v~~i~~-G~~~~~i 83 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGK-VVATIKV-GGNPRGI 83 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSS-EEEEEE--SSEEEEE
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCccc-EEEEEec-CCCcceE
Confidence 344 445568999999999999999997655444567899999999999999999999999988 4555543 3456889
Q ss_pred EEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec----------CCeEEEEEeCCCCEEEEEECC-CeEEEEEcCCCcEE
Q 044075 601 DFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK----------GGTVQVRFQPRLGLLLAAASE-NVVSIFDVETDRLT 669 (786)
Q Consensus 601 ~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----------~~i~~i~~sp~g~~Ll~gs~d-g~I~iwD~~t~~~i 669 (786)
+++++|+++++++...+.+.++|.++.+.+.... ..+..+..++....+++.-.| +.|.+.|....+.+
T Consensus 84 ~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~ 163 (369)
T PF02239_consen 84 AVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNL 163 (369)
T ss_dssp EE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCE
T ss_pred EEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecccccc
Confidence 9999999999999999999999999988877654 234567778888867666665 89999998775433
Q ss_pred -EEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEcc----CCCceEEEEEeCCCCEEE---------
Q 044075 670 -HSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSS----SGNKFHSCIFHPSYPTLM--------- 733 (786)
Q Consensus 670 -~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~----~~~~I~sv~fspdg~~L~--------- 733 (786)
..............|+|+++|++++... .|-++|.++++.+..+.. |..++..+ .||....+.
T Consensus 164 ~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~-php~~g~vw~~~~~~~~~ 242 (369)
T PF02239_consen 164 KVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANF-PHPGFGPVWATSGLGYFA 242 (369)
T ss_dssp EEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEE-EETTTEEEEEEEBSSSSE
T ss_pred ceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccc-cCCCcceEEeecccccee
Confidence 2333355677889999999998887544 899999999988766543 22233332 334332222
Q ss_pred -EEECCCeEEEEECCCCeEEEE-cccCCCeEEEEEcCCCCEEEEE----eCCCcEEEeC
Q 044075 734 -VIGGYQSLELWNMAENKCMTI-AAHDCVISALAQSPVTGMVASA----SHDKSVKIWK 786 (786)
Q Consensus 734 -sgs~dg~I~IwDl~~~~~~~~-~~h~~~V~slafspdg~~LaSg----s~DG~I~IWd 786 (786)
+.-..+.+.+||..+.+.+.. ...... .-+..+|++++|+.. ...+.|.|+|
T Consensus 243 ~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD 300 (369)
T PF02239_consen 243 IPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVID 300 (369)
T ss_dssp EEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEE
T ss_pred cccccCCccccchhhcCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEE
Confidence 222223455688888877744 444444 778889999999988 3447788775
No 237
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.44 E-value=7.5e-12 Score=136.73 Aligned_cols=234 Identities=16% Similarity=0.232 Sum_probs=171.6
Q ss_pred CCCCCeEEEEEccCCCEE-EEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEE-ecCCCeEEEEEcCCCcEEEEeCCC
Q 044075 549 DHNHIITDVRFRPNSTQL-ATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDF-HPKKNDLFCSCDGNSEIRFWNLSQ 626 (786)
Q Consensus 549 ~h~~~V~sl~fspdg~~L-asgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~-sp~g~~ll~sgs~Dg~I~iwDl~~ 626 (786)
.|....+.|..+|||.|+ ++|.+.-.|++||+.+-. +..-......|..+.. +.|-..++ .-..|.+|-+..--.
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLS--LKFERhlDae~V~feiLsDD~SK~v-~L~~DR~IefHak~G 125 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLS--LKFERHLDAEVVDFEILSDDYSKSV-FLQNDRTIEFHAKYG 125 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccce--eeeeecccccceeEEEeccchhhhe-EeecCceeeehhhcC
Confidence 567788999999999975 567778899999998754 2222222334444333 32322232 233466666654333
Q ss_pred CeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECC
Q 044075 627 YSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLA 705 (786)
Q Consensus 627 ~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~ 705 (786)
......+......++++.-..-|++++....|+-++++.|..+..+......+++|..++...+|++|+.+ .|-.||.+
T Consensus 126 ~hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR 205 (703)
T KOG2321|consen 126 RHYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPR 205 (703)
T ss_pred eeeeeecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecch
Confidence 22222223334556666666668888888899999999999999888888999999999999999999988 99999999
Q ss_pred CCeeEEEEccC------CC-----ceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCC--CeEEEEEcCC--C
Q 044075 706 SGECIHELSSS------GN-----KFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDC--VISALAQSPV--T 770 (786)
Q Consensus 706 s~~~i~~l~~~------~~-----~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~--~V~slafspd--g 770 (786)
+...+.++... .+ .|+++.|+.+|-.+++|+.+|.|.|||++..+.+.+..|.. +|..+.|.+. .
T Consensus 206 ~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q 285 (703)
T KOG2321|consen 206 DKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQ 285 (703)
T ss_pred hhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCC
Confidence 87766655432 22 38999999999999999999999999999999988887754 7888999765 3
Q ss_pred CEEEEEeCCCcEEEeC
Q 044075 771 GMVASASHDKSVKIWK 786 (786)
Q Consensus 771 ~~LaSgs~DG~I~IWd 786 (786)
+.|+|+ +...++|||
T Consensus 286 ~~v~S~-Dk~~~kiWd 300 (703)
T KOG2321|consen 286 NKVVSM-DKRILKIWD 300 (703)
T ss_pred ceEEec-chHHhhhcc
Confidence 466655 456899997
No 238
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.43 E-value=4.6e-11 Score=136.31 Aligned_cols=232 Identities=13% Similarity=0.145 Sum_probs=159.3
Q ss_pred eEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC-C--cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCe
Q 044075 532 KVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFD-K--TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKND 608 (786)
Q Consensus 532 ~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D-g--~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ 608 (786)
.|.++|.+.... ..+..+...+.+..|+|||+.|+..+.+ + .|++||+.+++. ..+....+......|+|+++.
T Consensus 199 ~l~i~d~dG~~~-~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~--~~lt~~~g~~~~~~wSPDG~~ 275 (448)
T PRK04792 199 QLMIADYDGYNE-QMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVR--EKVTSFPGINGAPRFSPDGKK 275 (448)
T ss_pred EEEEEeCCCCCc-eEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCe--EEecCCCCCcCCeeECCCCCE
Confidence 577778665433 4555667789999999999988876543 3 588889887652 222222334457899999999
Q ss_pred EEEEEcCCCc--EEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECC---CeEEEEEcCCCcEEEEEecCCCCEEE
Q 044075 609 LFCSCDGNSE--IRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASE---NVVSIFDVETDRLTHSFKGHSTEIHS 681 (786)
Q Consensus 609 ll~sgs~Dg~--I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~d---g~I~iwD~~t~~~i~~l~~h~~~I~s 681 (786)
++++.+.++. |++||+.+++...... ......+|+|+++.++..+.. ..|+++|+.+++..... .+......
T Consensus 276 La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt-~~g~~~~~ 354 (448)
T PRK04792 276 LALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLT-FEGEQNLG 354 (448)
T ss_pred EEEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEe-cCCCCCcC
Confidence 9887777775 7888988776554433 335678899999988777653 35788888877654322 12233445
Q ss_pred EEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCC---eEEEEECCCCeEEEE
Q 044075 682 VCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ---SLELWNMAENKCMTI 754 (786)
Q Consensus 682 v~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg---~I~IwDl~~~~~~~~ 754 (786)
.+|+|||++|+..+.+ .|.++|+.+++.. .+... .......|+|+++.|+..+.++ .|++++........+
T Consensus 355 ~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~G~~~~~l 432 (448)
T PRK04792 355 GSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSIDGRFKARL 432 (448)
T ss_pred eeECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEEC
Confidence 7899999998877653 4677888887643 23222 1223458999999888776543 478888866555566
Q ss_pred cccCCCeEEEEEcCC
Q 044075 755 AAHDCVISALAQSPV 769 (786)
Q Consensus 755 ~~h~~~V~slafspd 769 (786)
..+.+.+...+|+|-
T Consensus 433 ~~~~g~~~~p~Wsp~ 447 (448)
T PRK04792 433 PAGQGEVKSPAWSPF 447 (448)
T ss_pred cCCCCCcCCCccCCC
Confidence 666677888889873
No 239
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.42 E-value=1.3e-11 Score=129.86 Aligned_cols=234 Identities=15% Similarity=0.184 Sum_probs=177.2
Q ss_pred CCCCeEEEEEccCCC--EEEEEeCCCcEEEEcCCCCccee-----eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEE
Q 044075 550 HNHIITDVRFRPNST--QLATSSFDKTVRIWDAAKPNFCL-----QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFW 622 (786)
Q Consensus 550 h~~~V~sl~fspdg~--~Lasgs~Dg~I~VWdl~s~~~~~-----~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iw 622 (786)
....|+.++|.-+++ .|+.++.|..+..+.+......- ........+|..+... +. .+++|..+|.+.+|
T Consensus 54 ~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~--dg-~Litc~~sG~l~~~ 130 (412)
T KOG3881|consen 54 ELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA--DG-TLITCVSSGNLQVR 130 (412)
T ss_pred hhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc--CC-EEEEEecCCcEEEE
Confidence 345678888876543 44444467677777766544211 1333445667777665 23 34588889999999
Q ss_pred eCCCCe-----eeEee-cCCeEEEEEeCCCCEEEE-EECC--CeEEEEEcCCCcEEEEEecC---------CCCEEEEEE
Q 044075 623 NLSQYS-----CARIS-KGGTVQVRFQPRLGLLLA-AASE--NVVSIFDVETDRLTHSFKGH---------STEIHSVCW 684 (786)
Q Consensus 623 Dl~~~~-----~~~~~-~~~i~~i~~sp~g~~Ll~-gs~d--g~I~iwD~~t~~~i~~l~~h---------~~~I~sv~~ 684 (786)
..+.+. .+..- ..+...+.-++...++++ |+.. ..+.|||++..+.+.+-+.- .-+++++.|
T Consensus 131 ~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~F 210 (412)
T KOG3881|consen 131 HDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRF 210 (412)
T ss_pred eccCCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeecccee
Confidence 988432 22222 245556666666555554 8888 88999999988666654421 235678899
Q ss_pred cCC--CCEEEEEeCC-eEEEEECCCC-eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE--EEcccC
Q 044075 685 DTN--GEYLASVSQD-SVRVWSLASG-ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM--TIAAHD 758 (786)
Q Consensus 685 spd--g~~Lasgs~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~--~~~~h~ 758 (786)
-+. ...|++++.- .|++||.+.+ +++..+...+.+++++...|+++.|+++...+.+..||++.++.. .+.+..
T Consensus 211 l~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~t 290 (412)
T KOG3881|consen 211 LEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGIT 290 (412)
T ss_pred cCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCcc
Confidence 887 7889999887 9999999976 688888888999999999999999999999999999999999987 367889
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 759 CVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 759 ~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+.|++|..+|..++|++||-|..|||+|
T Consensus 291 Gsirsih~hp~~~~las~GLDRyvRIhD 318 (412)
T KOG3881|consen 291 GSIRSIHCHPTHPVLASCGLDRYVRIHD 318 (412)
T ss_pred CCcceEEEcCCCceEEeeccceeEEEee
Confidence 9999999999999999999999999997
No 240
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.42 E-value=1.7e-11 Score=123.93 Aligned_cols=108 Identities=24% Similarity=0.435 Sum_probs=89.3
Q ss_pred CCCCEEEEEEcCCCCEEEEEe--CC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCC
Q 044075 675 HSTEIHSVCWDTNGEYLASVS--QD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY---QSLELWNMAE 748 (786)
Q Consensus 675 h~~~I~sv~~spdg~~Lasgs--~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d---g~I~IwDl~~ 748 (786)
..++|.+++|+|+|+.|+++. .+ .|.+||++ ++.+..+. ...+..+.|+|+|++|++++.+ |.|.+||+++
T Consensus 58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~ 134 (194)
T PF08662_consen 58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK 134 (194)
T ss_pred CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence 445799999999999887664 33 89999997 66666664 5677899999999999998754 5799999998
Q ss_pred CeEEEEcccCCCeEEEEEcCCCCEEEEEeC------CCcEEEeC
Q 044075 749 NKCMTIAAHDCVISALAQSPVTGMVASASH------DKSVKIWK 786 (786)
Q Consensus 749 ~~~~~~~~h~~~V~slafspdg~~LaSgs~------DG~I~IWd 786 (786)
.+.+....|.. ++.++|+|||++|+++.. |+.++||+
T Consensus 135 ~~~i~~~~~~~-~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~ 177 (194)
T PF08662_consen 135 KKKISTFEHSD-ATDVEWSPDGRYLATATTSPRLRVDNGFKIWS 177 (194)
T ss_pred CEEeeccccCc-EEEEEEcCCCCEEEEEEeccceeccccEEEEE
Confidence 88887766665 789999999999999875 78889985
No 241
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.42 E-value=6.6e-12 Score=130.02 Aligned_cols=249 Identities=17% Similarity=0.236 Sum_probs=185.3
Q ss_pred ceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcC-CCeeeeec-CCCCCCeEEEEEccCCCEEEEEeCCCc
Q 044075 497 FSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNME-NFQTECTP-DDHNHIITDVRFRPNSTQLATSSFDKT 574 (786)
Q Consensus 497 ~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~-t~~~~~~l-~~h~~~V~sl~fspdg~~Lasgs~Dg~ 574 (786)
+.+..+..++||.+.|+....-|-..-+++.+.|.+++||--. .++.-..+ .....+++++.+.++...|++|-..|+
T Consensus 12 ~kp~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngt 91 (404)
T KOG1409|consen 12 KKPELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGT 91 (404)
T ss_pred cchhhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecce
Confidence 4455677899999999999999988889999999999999643 33332222 234567899999999999999999999
Q ss_pred EEEEcCCCCc---ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe--ecCCeEEEEEeCCCCEE
Q 044075 575 VRIWDAAKPN---FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI--SKGGTVQVRFQPRLGLL 649 (786)
Q Consensus 575 I~VWdl~s~~---~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~--~~~~i~~i~~sp~g~~L 649 (786)
+.-+.+...- ...+.+..|...|..+.|+.....++ +++.|..+.---.+.+..+.. +....+...+.-. +.
T Consensus 92 vtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~-s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~--~~ 168 (404)
T KOG1409|consen 92 VTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVL-STGKDKQFAWHCTESGNRLGGYNFETPASALQFDAL--YA 168 (404)
T ss_pred EEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEE-EeccccceEEEeeccCCcccceEeeccCCCCceeeE--EE
Confidence 9988765321 23556778999999999987655444 777776654433333322211 1111111111111 56
Q ss_pred EEEECCCeEEEEEcC--CCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe-eEEEEccCCCceEEEEE
Q 044075 650 LAAASENVVSIFDVE--TDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE-CIHELSSSGNKFHSCIF 725 (786)
Q Consensus 650 l~gs~dg~I~iwD~~--t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~-~i~~l~~~~~~I~sv~f 725 (786)
++|...|.|.+..+. .-.++.++.+|...+.+++|.+...+|++|..| .|.+||+.-.+ ...++.+|...|..+..
T Consensus 169 fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~ 248 (404)
T KOG1409|consen 169 FVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSY 248 (404)
T ss_pred EecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhh
Confidence 666667776665544 347788999999999999999999999999999 99999997653 45677788999999988
Q ss_pred eCCCCEEEEEECCCeEEEEECCC
Q 044075 726 HPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 726 spdg~~L~sgs~dg~I~IwDl~~ 748 (786)
.+.-+.+++++.||.|.+||++.
T Consensus 249 ~~~t~~l~S~~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 249 AQHTRQLISCGEDGGIVVWNMNV 271 (404)
T ss_pred hhhheeeeeccCCCeEEEEeccc
Confidence 88888999999999999999875
No 242
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.40 E-value=3.7e-12 Score=127.65 Aligned_cols=199 Identities=18% Similarity=0.263 Sum_probs=148.1
Q ss_pred Eee-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee--------------e-------------c--------
Q 044075 504 SIR-KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC--------------T-------------P-------- 547 (786)
Q Consensus 504 ~l~-~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~--------------~-------------l-------- 547 (786)
.++ .|...|+.+..-|+ ..|.+-+.|+.+.+|++.....+. . +
T Consensus 50 ~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~ 128 (323)
T KOG0322|consen 50 LIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDET 128 (323)
T ss_pred hhhhhccceeeceeecCC-cchhhcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchh
Confidence 344 36667777777776 456677788888888765311000 0 0
Q ss_pred ------------------CCCCCCeEEEEEcc-CCC--EEEEEeCCCcEEEEcCCCCcce---------eeeecCCCCCe
Q 044075 548 ------------------DDHNHIITDVRFRP-NST--QLATSSFDKTVRIWDAAKPNFC---------LQTYTGHNNHV 597 (786)
Q Consensus 548 ------------------~~h~~~V~sl~fsp-dg~--~Lasgs~Dg~I~VWdl~s~~~~---------~~~~~~h~~~V 597 (786)
....+.+.|..|.. ++. ++++|-++|.|.+||+.++... ......|..+|
T Consensus 129 h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpv 208 (323)
T KOG0322|consen 129 HKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPV 208 (323)
T ss_pred hhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcc
Confidence 01234566666433 222 4567778999999999986422 22345789999
Q ss_pred EEEEEecCCCeEEEEEcCCCcEEEEeCCCC-------eeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEE
Q 044075 598 MSLDFHPKKNDLFCSCDGNSEIRFWNLSQY-------SCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTH 670 (786)
Q Consensus 598 ~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~-------~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~ 670 (786)
.++.|.+.-+.=+ +++.+..+..|++... ......+.++..+.+-||++.+++++.|+.|+||..++..++.
T Consensus 209 lsldyas~~~rGi-sgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLA 287 (323)
T KOG0322|consen 209 LSLDYASSCDRGI-SGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLA 287 (323)
T ss_pred eeeeechhhcCCc-CCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchh
Confidence 9999986544333 6777888899988642 2334445778889999999999999999999999999999999
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEEC
Q 044075 671 SFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSL 704 (786)
Q Consensus 671 ~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl 704 (786)
.++-|...|++++|+|+..++++++.| .|.+|++
T Consensus 288 VLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 288 VLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred hhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 999999999999999999999999999 9999986
No 243
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.40 E-value=3.5e-11 Score=125.38 Aligned_cols=225 Identities=17% Similarity=0.215 Sum_probs=161.2
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe---
Q 044075 552 HIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS--- 628 (786)
Q Consensus 552 ~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~--- 628 (786)
..+..++|++.-..++++..|-.|++||-.... ...........|+|++|-|.+...++.++ .+.|.+|......
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~ksst~-pt~Lks~sQrnvtclawRPlsaselavgC-r~gIciW~~s~tln~~ 176 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSSTC-PTKLKSVSQRNVTCLAWRPLSASELAVGC-RAGICIWSDSRTLNAN 176 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCCCC-CceecchhhcceeEEEeccCCcceeeeee-cceeEEEEcCcccccc
Confidence 357789999977788999999999999987733 22222233467999999998877776666 5679999765311
Q ss_pred -e--------eEeec----CCeEEEEEeCCCCEEEEEEC-CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEE
Q 044075 629 -C--------ARISK----GGTVQVRFQPRLGLLLAAAS-ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASV 694 (786)
Q Consensus 629 -~--------~~~~~----~~i~~i~~sp~g~~Ll~gs~-dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasg 694 (786)
. ..+++ ..++++.|.+||..+++++. +..|.|||..++..+.......+.+.-+.|+||+.+|+++
T Consensus 177 r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaA 256 (445)
T KOG2139|consen 177 RNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAA 256 (445)
T ss_pred cccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEe
Confidence 1 11111 45788999999999999887 5789999999997666554456778899999999999999
Q ss_pred eCC-eEEEEE-CCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECC--CC----------eEE--------
Q 044075 695 SQD-SVRVWS-LASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA--EN----------KCM-------- 752 (786)
Q Consensus 695 s~D-~I~vwD-l~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~--~~----------~~~-------- 752 (786)
+-| ..++|. ..+..+.+-..+. +.|...+|+|+|.+|+..... .-++|.+. .. +..
T Consensus 257 t~davfrlw~e~q~wt~erw~lgs-grvqtacWspcGsfLLf~~sg-sp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e 334 (445)
T KOG2139|consen 257 TCDAVFRLWQENQSWTKERWILGS-GRVQTACWSPCGSFLLFACSG-SPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQE 334 (445)
T ss_pred cccceeeeehhcccceecceeccC-CceeeeeecCCCCEEEEEEcC-CceEEEEeecCCCccccCcccceeeeeeccchh
Confidence 999 999994 4455555444444 589999999999977665543 22333321 11 011
Q ss_pred -EEcc----cCCCeEEEEEcCCCCEEEEEeCCC
Q 044075 753 -TIAA----HDCVISALAQSPVTGMVASASHDK 780 (786)
Q Consensus 753 -~~~~----h~~~V~slafspdg~~LaSgs~DG 780 (786)
++.. ..+.+.+++|.|.|.+||+.-..+
T Consensus 335 ~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~ 367 (445)
T KOG2139|consen 335 VTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQ 367 (445)
T ss_pred hhhhcCcccccCccceeeECCCCCEEEEEEcCC
Confidence 1111 256789999999999999876554
No 244
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.39 E-value=1.4e-11 Score=143.12 Aligned_cols=265 Identities=15% Similarity=0.222 Sum_probs=187.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec------CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP------DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l------~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
|-+++++..+-. ++|.+| ..-.|.+||+..+..+..+ ..|...=.-. -.+.+++++..-+.+.+=+..
T Consensus 6 ~~~~l~~~~~~~--~~llag-~gp~i~~yd~~s~~li~~~~~~~~~~~H~~e~~~~---l~~~~~v~~~~~~~v~~~~~~ 79 (967)
T KOG0974|consen 6 SLGPLNLPQLVS--DYLLAG-SGPEILVYDLSSGCLIRHLIQSKILEVHRGEGKVK---LLSGKIVTCAKSDEVYVKEAS 79 (967)
T ss_pred ccccccchhhcc--ceeeec-CCCceEEeeCCchhHhhhhhhhcccccccccccce---eccceEEEEEeecceeecchh
Confidence 334566666654 567665 4567999999887665544 2331000000 023355555544434333222
Q ss_pred CCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEE-------EEEeCCCCEEEEEEC
Q 044075 582 KPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQ-------VRFQPRLGLLLAAAS 654 (786)
Q Consensus 582 s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~-------i~~sp~g~~Ll~gs~ 654 (786)
.. ........|....+..+...++ ....+..+.+||...............+ +-++++.-++++|+.
T Consensus 80 ~~-----~~~~~s~wi~g~~l~~e~k~i~-l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv 153 (967)
T KOG0974|consen 80 NQ-----IIERFSDWIFGAKLFEENKKIA-LVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSV 153 (967)
T ss_pred hh-----hhhhccccccccchhhhcceEE-EEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccc
Confidence 11 1122223344444444444444 5555889999999877665544433222 335667778899999
Q ss_pred CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEE-EEccCCCceEEEEEeCCCCEE
Q 044075 655 ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIH-ELSSSGNKFHSCIFHPSYPTL 732 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~-~l~~~~~~I~sv~fspdg~~L 732 (786)
-+.|.+|+....+.-..+.+|.+.|.++.|+.||++++++|+| ++++|++.+.+... ..-+|...|..++|+|. .+
T Consensus 154 ~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i 231 (967)
T KOG0974|consen 154 FGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RI 231 (967)
T ss_pred cccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--ee
Confidence 9999999988444444688999999999999999999999999 99999999987665 67789999999999999 89
Q ss_pred EEEECCCeEEEEECCCCeEEEEcccC-CCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 733 MVIGGYQSLELWNMAENKCMTIAAHD-CVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 733 ~sgs~dg~I~IwDl~~~~~~~~~~h~-~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
++++.|.+.++|+........+..|. ..|+.++..++...++|++.||.+++|+
T Consensus 232 ~t~gedctcrvW~~~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~ 286 (967)
T KOG0974|consen 232 ITVGEDCTCRVWGVNGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWD 286 (967)
T ss_pred EEeccceEEEEEecccceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhh
Confidence 99999999999987776666777774 5799999999999999999999999996
No 245
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.37 E-value=4.2e-11 Score=120.99 Aligned_cols=156 Identities=15% Similarity=0.347 Sum_probs=114.1
Q ss_pred EEEEEccCCCEEEEEeC----------CCcEEEEcCCCCcceeeeec-CCCCCeEEEEEecCCCeEEEE-EcCCCcEEEE
Q 044075 555 TDVRFRPNSTQLATSSF----------DKTVRIWDAAKPNFCLQTYT-GHNNHVMSLDFHPKKNDLFCS-CDGNSEIRFW 622 (786)
Q Consensus 555 ~sl~fspdg~~Lasgs~----------Dg~I~VWdl~s~~~~~~~~~-~h~~~V~sl~~sp~g~~ll~s-gs~Dg~I~iw 622 (786)
..+.|+++|++|++-.. -+...||.++........+. ...++|.+++|+|+++.+++. |..+..|.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 46789999987765432 13455666544333333332 234579999999999887544 4467899999
Q ss_pred eCCCCeeeEeecCCeEEEEEeCCCCEEEEEECC---CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC---
Q 044075 623 NLSQYSCARISKGGTVQVRFQPRLGLLLAAASE---NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ--- 696 (786)
Q Consensus 623 Dl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~d---g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~--- 696 (786)
|++..............+.|+|+|+++++++.+ |.|.+||+++.+.+..+. |. .++.++|+|+|++|+++..
T Consensus 89 d~~~~~i~~~~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~~~ta~t~~r 166 (194)
T PF08662_consen 89 DVKGKKIFSFGTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HS-DATDVEWSPDGRYLATATTSPR 166 (194)
T ss_pred cCcccEeEeecCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cC-cEEEEEEcCCCCEEEEEEeccc
Confidence 998544444455677889999999999998754 679999999888887776 33 4789999999999998863
Q ss_pred ---C-eEEEEECCCCeeEEEE
Q 044075 697 ---D-SVRVWSLASGECIHEL 713 (786)
Q Consensus 697 ---D-~I~vwDl~s~~~i~~l 713 (786)
| .++||+.. |+.+...
T Consensus 167 ~~~dng~~Iw~~~-G~~l~~~ 186 (194)
T PF08662_consen 167 LRVDNGFKIWSFQ-GRLLYKK 186 (194)
T ss_pred eeccccEEEEEec-CeEeEec
Confidence 4 78999984 5555443
No 246
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.37 E-value=1.7e-10 Score=131.26 Aligned_cols=221 Identities=16% Similarity=0.184 Sum_probs=152.2
Q ss_pred eEEeecCCCCeEEEEEcCCCCEEEEEECC---CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEE-EeCCC--cE
Q 044075 502 VSSIRKSSSKVTCCHFSSDGKLLASAGHD---KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLAT-SSFDK--TV 575 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpdg~~Lasgs~D---g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Las-gs~Dg--~I 575 (786)
...+..+...+....|+|||+.|+..+.+ ..|.+||+.+++... +....+.+...+|+|||+.|+. .+.++ .|
T Consensus 191 ~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~I 269 (430)
T PRK00178 191 AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEI 269 (430)
T ss_pred ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceE
Confidence 34555677889999999999999877644 369999998876543 3333445667999999998874 44455 58
Q ss_pred EEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC--cEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEE
Q 044075 576 RIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS--EIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLA 651 (786)
Q Consensus 576 ~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg--~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~ 651 (786)
++||+.++. ...+..+........|+|+++.++++...++ .|+++|+.+++...... .......|+|+++.++.
T Consensus 270 y~~d~~~~~--~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~~i~~ 347 (430)
T PRK00178 270 YVMDLASRQ--LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNARPRLSADGKTLVM 347 (430)
T ss_pred EEEECCCCC--eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccceEECCCCCEEEE
Confidence 888998765 3445555566777899999999887776554 57777887776544332 22345689999999988
Q ss_pred EECC-C--eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEE
Q 044075 652 AASE-N--VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCI 724 (786)
Q Consensus 652 gs~d-g--~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~ 724 (786)
...+ + .|.++|+.+++... +. +........|+|||+.|+..+.+ .|.++++.. .....+..+.+.+...+
T Consensus 348 ~~~~~~~~~l~~~dl~tg~~~~-lt-~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g-~~~~~l~~~~g~~~~p~ 424 (430)
T PRK00178 348 VHRQDGNFHVAAQDLQRGSVRI-LT-DTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSING-RVRLPLPTAQGEVREPS 424 (430)
T ss_pred EEccCCceEEEEEECCCCCEEE-cc-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCC-CceEECcCCCCCcCCCc
Confidence 7754 2 58899998876433 22 12222356899999998877643 477778754 33344544555666677
Q ss_pred EeCC
Q 044075 725 FHPS 728 (786)
Q Consensus 725 fspd 728 (786)
|+|-
T Consensus 425 ws~~ 428 (430)
T PRK00178 425 WSPY 428 (430)
T ss_pred cCCC
Confidence 7763
No 247
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.36 E-value=1.9e-10 Score=131.37 Aligned_cols=218 Identities=18% Similarity=0.219 Sum_probs=149.1
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEECC---CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEE-EeCCCc--EEE
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASAGHD---KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLAT-SSFDKT--VRI 577 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasgs~D---g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Las-gs~Dg~--I~V 577 (786)
.+..+...+.+..|+|||+.|+..+.+ ..|++||+.+++.... ..........+|+||++.|+. .+.++. |++
T Consensus 212 ~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~l-t~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~ 290 (448)
T PRK04792 212 MLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKV-TSFPGINGAPRFSPDGKKLALVLSKDGQPEIYV 290 (448)
T ss_pred EeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEe-cCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEE
Confidence 445567788999999999998876543 2588999988765332 222334457899999997765 455665 777
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCc--EEEEeCCCCeeeEee-c-CCeEEEEEeCCCCEEEEEE
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSE--IRFWNLSQYSCARIS-K-GGTVQVRFQPRLGLLLAAA 653 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~--I~iwDl~~~~~~~~~-~-~~i~~i~~sp~g~~Ll~gs 653 (786)
||+.+++ ...+..+...+...+|+|+++.++++...++. |+++|+.+++..... . ......+|+|++++++..+
T Consensus 291 ~dl~tg~--~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~ 368 (448)
T PRK04792 291 VDIATKA--LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGRSMIMVN 368 (448)
T ss_pred EECCCCC--eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCCcCeeECCCCCEEEEEE
Confidence 7887765 44455555667789999999999887765554 666778776655443 2 2234568999999988876
Q ss_pred CC-C--eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEEEe
Q 044075 654 SE-N--VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCIFH 726 (786)
Q Consensus 654 ~d-g--~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~fs 726 (786)
.+ + .|.++|+.+++... +... .......|+|||+.|+..+.+ .+.+++. ++.....+..+.+.+...+|+
T Consensus 369 ~~~g~~~I~~~dl~~g~~~~-lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~~g~~~~p~Ws 445 (448)
T PRK04792 369 RTNGKFNIARQDLETGAMQV-LTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAGQGEVKSPAWS 445 (448)
T ss_pred ecCCceEEEEEECCCCCeEE-ccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCcCCCccC
Confidence 54 3 56778888876533 2222 122345899999988776543 3777886 555666666656667777887
Q ss_pred C
Q 044075 727 P 727 (786)
Q Consensus 727 p 727 (786)
|
T Consensus 446 p 446 (448)
T PRK04792 446 P 446 (448)
T ss_pred C
Confidence 6
No 248
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.36 E-value=3.7e-10 Score=122.47 Aligned_cols=271 Identities=17% Similarity=0.222 Sum_probs=193.2
Q ss_pred CCeEEEEEcCCCCEEEEEECC---------------CeEEEEEcCCCeeeeecCCCCCC--eE-EEEEccCCCEEEEEeC
Q 044075 510 SKVTCCHFSSDGKLLASAGHD---------------KKVVVWNMENFQTECTPDDHNHI--IT-DVRFRPNSTQLATSSF 571 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~D---------------g~V~IWdl~t~~~~~~l~~h~~~--V~-sl~fspdg~~Lasgs~ 571 (786)
..|..+.|||.+++|.+=+.. ..+.|||+.++..+..+.....+ .+ -+.|+-+++++|-. .
T Consensus 72 ~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v 150 (561)
T COG5354 72 PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-V 150 (561)
T ss_pred CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-c
Confidence 359999999999999986543 35999999999999999776665 55 68899888876654 2
Q ss_pred CCcEEEEcCCCCcceeeeecCC-CCCeEEEEEecCCCe-EEEE-----EcCCCcEEEEeCCCCeeeEe---ecCCeEEEE
Q 044075 572 DKTVRIWDAAKPNFCLQTYTGH-NNHVMSLDFHPKKND-LFCS-----CDGNSEIRFWNLSQYSCARI---SKGGTVQVR 641 (786)
Q Consensus 572 Dg~I~VWdl~s~~~~~~~~~~h-~~~V~sl~~sp~g~~-ll~s-----gs~Dg~I~iwDl~~~~~~~~---~~~~i~~i~ 641 (786)
...++|+++ ++......+..- ...|....|+|.+++ .||. ....+.+++|.+...+.+.. ++..-..+.
T Consensus 151 ~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLk 229 (561)
T COG5354 151 GSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLK 229 (561)
T ss_pred cCeEEEEec-CCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEE
Confidence 356999997 433222222211 256888889987433 2222 24578899999987665543 335556788
Q ss_pred EeCCCCEEEEEEC-----------CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEe--CC-eEEEEECCCC
Q 044075 642 FQPRLGLLLAAAS-----------ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVS--QD-SVRVWSLASG 707 (786)
Q Consensus 642 ~sp~g~~Ll~gs~-----------dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs--~D-~I~vwDl~s~ 707 (786)
|++.|+++++-.. +..++++++....+.... ...++|...+|.|.++.+++++ .. .+.++|++..
T Consensus 230 W~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~-~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N 308 (561)
T COG5354 230 WQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEK-DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN 308 (561)
T ss_pred EecCCceEEEEEEEeeecccceeccceEEEEeecccccceec-cccccceeeeecccCCceeEEecccccceeecccccc
Confidence 9999988765431 356888888844333322 5688999999999998887766 34 8999999876
Q ss_pred eeEEEEccCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEe------C
Q 044075 708 ECIHELSSSGNKFHSCIFHPSYPTLMVIGGY---QSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASAS------H 778 (786)
Q Consensus 708 ~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d---g~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs------~ 778 (786)
.. +......=..+.|+|.+++++.++-+ |.|.+||..+...+.-.-.....+-+.|+||+.++.+.. .
T Consensus 309 -l~--~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n~s~~~wspd~qF~~~~~ts~k~~~ 385 (561)
T COG5354 309 -LR--FYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLNTSYCDWSPDGQFYDTDTTSEKLRV 385 (561)
T ss_pred -eE--EecCCcccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeecCCceEeeccCCceEEEecCCCccccc
Confidence 33 22345556678899999999998876 589999998876654333334455678999999887754 3
Q ss_pred CCcEEEeC
Q 044075 779 DKSVKIWK 786 (786)
Q Consensus 779 DG~I~IWd 786 (786)
|..|+|||
T Consensus 386 Dn~i~l~~ 393 (561)
T COG5354 386 DNSIKLWD 393 (561)
T ss_pred CcceEEEE
Confidence 67899996
No 249
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.36 E-value=6.4e-12 Score=135.91 Aligned_cols=279 Identities=16% Similarity=0.265 Sum_probs=201.7
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcC-------CCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNME-------NFQTECTPDDHNHIITDVRFRPNSTQLATSSFD 572 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~-------t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D 572 (786)
-.+..+.||..+|..++--.+.+.+++++.|.+|++|.++ +..+..++..|+.+|.++.|..+-++++++ |
T Consensus 726 irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D 803 (1034)
T KOG4190|consen 726 IRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--D 803 (1034)
T ss_pred eeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--c
Confidence 3456788999999999988888899999999999999986 334677889999999999999888777654 7
Q ss_pred CcEEEEcCCCCcceeeeec----CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--------CCeEEE
Q 044075 573 KTVRIWDAAKPNFCLQTYT----GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--------GGTVQV 640 (786)
Q Consensus 573 g~I~VWdl~s~~~~~~~~~----~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--------~~i~~i 640 (786)
|.|.+||.--+........ +..+.|.|+.- -+...+++.|+...+|+++|.+..+.....+ ..+.++
T Consensus 804 ~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~n-v~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~i 882 (1034)
T KOG4190|consen 804 GGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLEN-VDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAI 882 (1034)
T ss_pred CcceeecccccchhHhhhcCcccCCCceeEeccc-CcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEE
Confidence 8999999876553222221 12233444432 1345566666889999999999876544332 346788
Q ss_pred EEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEE-EECCCCeeEEEEccCCC
Q 044075 641 RFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRV-WSLASGECIHELSSSGN 718 (786)
Q Consensus 641 ~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~v-wDl~s~~~i~~l~~~~~ 718 (786)
++.+.|++++++-..|.|.+.|.++++.+..+.........++ .|....|+....| ++.| |..-++......+....
T Consensus 883 aVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldgimh~q~kpppe 961 (1034)
T KOG4190|consen 883 AVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDGIMHLQDKPPPE 961 (1034)
T ss_pred EeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCCeeeeccCCCCc
Confidence 9999999999999999999999999999988876655555555 3666677777677 8888 88777765555554433
Q ss_pred ceEEEEEeCCCCEEEEEECCCeEEEEECCCC-------eEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 719 KFHSCIFHPSYPTLMVIGGYQSLELWNMAEN-------KCMTIAAHDCVISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 719 ~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~-------~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~I 784 (786)
+..-+ -.-|+.+++......+.+|.-... ..++.....+..++++.-|-+.-+..|.+.|.|.+
T Consensus 962 pahfl--qsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen 962 PAHFL--QSVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred chhhh--hccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhccCCCCceee
Confidence 32211 223566777777777888843211 11223345678899999998887888888898875
No 250
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.33 E-value=3.6e-10 Score=127.85 Aligned_cols=203 Identities=16% Similarity=0.180 Sum_probs=146.9
Q ss_pred CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC--CcEEEEeCCCCeeeEe--ecCCeEEEEEeCCCCE
Q 044075 573 KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN--SEIRFWNLSQYSCARI--SKGGTVQVRFQPRLGL 648 (786)
Q Consensus 573 g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D--g~I~iwDl~~~~~~~~--~~~~i~~i~~sp~g~~ 648 (786)
..|.++|..... .+.+..+...+.+.+|+|+++.++++...+ ..|++||+.+++.... ..+....++|+|+++.
T Consensus 170 ~~l~~~d~~g~~--~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~ 247 (417)
T TIGR02800 170 YELQVADYDGAN--PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSK 247 (417)
T ss_pred ceEEEEcCCCCC--CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCE
Confidence 358888876443 444555667789999999999888766443 5799999988754433 3355667899999998
Q ss_pred EEEEEC-C--CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceE
Q 044075 649 LLAAAS-E--NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFH 721 (786)
Q Consensus 649 Ll~gs~-d--g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~ 721 (786)
|+.... + ..|++||+.++.... +..+........|+|+|++|+.++.. .|+++|+.+++.. .+..+...+.
T Consensus 248 l~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~ 325 (417)
T TIGR02800 248 LAVSLSKDGNPDIYVMDLDGKQLTR-LTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNA 325 (417)
T ss_pred EEEEECCCCCccEEEEECCCCCEEE-CCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCcc
Confidence 876543 3 359999998775433 33354455677999999988876643 5888898877643 4444556677
Q ss_pred EEEEeCCCCEEEEEECCC---eEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCC
Q 044075 722 SCIFHPSYPTLMVIGGYQ---SLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDK 780 (786)
Q Consensus 722 sv~fspdg~~L~sgs~dg---~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG 780 (786)
...|+|++++|+.++.++ .|.+||+.++....+... .......|+||+++|+.++.++
T Consensus 326 ~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~l~~~-~~~~~p~~spdg~~l~~~~~~~ 386 (417)
T TIGR02800 326 SPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERVLTDT-GLDESPSFAPNGRMILYATTRG 386 (417)
T ss_pred CeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEEccCC-CCCCCceECCCCCEEEEEEeCC
Confidence 889999999999988776 799999988766544433 2345678999999888777654
No 251
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.33 E-value=1.4e-11 Score=132.45 Aligned_cols=246 Identities=17% Similarity=0.255 Sum_probs=188.7
Q ss_pred CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCC-CeEEEEEcCCCcE
Q 044075 541 FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKK-NDLFCSCDGNSEI 619 (786)
Q Consensus 541 ~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g-~~ll~sgs~Dg~I 619 (786)
......+..|.+.|..|.|+..|..|++|+.|..|.+||.......+....+|...|....|.|.. ..-+++++.||.|
T Consensus 132 ~~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqv 211 (559)
T KOG1334|consen 132 LRLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQV 211 (559)
T ss_pred hhhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCce
Confidence 345567889999999999999999999999999999999999887777788999999998898853 4456699999999
Q ss_pred EEEeCCCC------eeeEeecCCeEEEEEeCCCC-EEEEEECCCeEEEEEcCCCcEEEEEe---cCCC---CEEEEEEcC
Q 044075 620 RFWNLSQY------SCARISKGGTVQVRFQPRLG-LLLAAASENVVSIFDVETDRLTHSFK---GHST---EIHSVCWDT 686 (786)
Q Consensus 620 ~iwDl~~~------~~~~~~~~~i~~i~~sp~g~-~Ll~gs~dg~I~iwD~~t~~~i~~l~---~h~~---~I~sv~~sp 686 (786)
++=.+... +.+..+.+++..++.-|+.. .|++++.|+.+.-+|++...+...+. .+.. ....|+.+|
T Consensus 212 r~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P 291 (559)
T KOG1334|consen 212 RVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDP 291 (559)
T ss_pred eeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCC
Confidence 98776432 23344568888888888764 58889999999999999875433332 2333 567888888
Q ss_pred CCC-EEEEEeCC-eEEEEECCCCe------eEEEEcc------CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe--
Q 044075 687 NGE-YLASVSQD-SVRVWSLASGE------CIHELSS------SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK-- 750 (786)
Q Consensus 687 dg~-~Lasgs~D-~I~vwDl~s~~------~i~~l~~------~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~-- 750 (786)
... .+++++.| .++|||.+.-. .+..+.. ....|++++|+.++.-|++.-.|-.|++|.-.-+.
T Consensus 292 ~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~ 371 (559)
T KOG1334|consen 292 RNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGS 371 (559)
T ss_pred CCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCC
Confidence 665 78888888 99999987531 2233322 23468999999998889999999999999543221
Q ss_pred ----------EE--EEcccCC--CeEEEEE-cCCCCEEEEEeCCCcEEEeC
Q 044075 751 ----------CM--TIAAHDC--VISALAQ-SPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 751 ----------~~--~~~~h~~--~V~slaf-spdg~~LaSgs~DG~I~IWd 786 (786)
.+ .+.+|.. .|..+-| -|...|+++|++=|.|.|||
T Consensus 372 ~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~ 422 (559)
T KOG1334|consen 372 EPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWD 422 (559)
T ss_pred CCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEe
Confidence 11 2567744 4777765 57888999999999999997
No 252
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.32 E-value=7.9e-10 Score=125.37 Aligned_cols=236 Identities=14% Similarity=0.128 Sum_probs=159.0
Q ss_pred CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCE--E-EEEeCCC--cEEEEcCCCCcceeeeecCCCCCeEEEEEecC
Q 044075 531 KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQ--L-ATSSFDK--TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPK 605 (786)
Q Consensus 531 g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~--L-asgs~Dg--~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~ 605 (786)
..|.+.|.+.... ..+......+.+-+|+|||+. + +++..+| .|.+.++..++ ...+....+......|+||
T Consensus 165 ~~l~~~d~dG~~~-~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~--~~~lt~~~g~~~~p~wSPD 241 (428)
T PRK01029 165 GELWSVDYDGQNL-RPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPA--GKKILALQGNQLMPTFSPR 241 (428)
T ss_pred ceEEEEcCCCCCc-eEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCC--ceEeecCCCCccceEECCC
Confidence 3577777765444 345455566788899999974 2 2444444 47777887765 3333334455667899999
Q ss_pred CCeEEEEEcCCC--c--EEEEeCCCC---eeeEeec---CCeEEEEEeCCCCEEEEEEC-CCe--EEEEEcCC-CcEEEE
Q 044075 606 KNDLFCSCDGNS--E--IRFWNLSQY---SCARISK---GGTVQVRFQPRLGLLLAAAS-ENV--VSIFDVET-DRLTHS 671 (786)
Q Consensus 606 g~~ll~sgs~Dg--~--I~iwDl~~~---~~~~~~~---~~i~~i~~sp~g~~Ll~gs~-dg~--I~iwD~~t-~~~i~~ 671 (786)
|+.|+++.+.+| . +.+|++..+ ....... +.....+|+|||+.|+..+. ++. |+++++.. +.....
T Consensus 242 G~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~ 321 (428)
T PRK01029 242 KKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRL 321 (428)
T ss_pred CCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEE
Confidence 999988775444 3 344676642 3333332 23356899999998887764 554 55555542 233444
Q ss_pred EecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECC---CeEEEE
Q 044075 672 FKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY---QSLELW 744 (786)
Q Consensus 672 l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d---g~I~Iw 744 (786)
+..+...+....|+|||++|+..+.+ .|.+||+.+++.. .+......+....|+|+++.|+....+ ..|++|
T Consensus 322 lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~-~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~v 400 (428)
T PRK01029 322 LTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY-QLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLI 400 (428)
T ss_pred eccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE-EccCCCCCccceEECCCCCEEEEEECCCCCceEEEE
Confidence 44455567789999999998877543 6999999988754 333334456788999999988866543 479999
Q ss_pred ECCCCeEEEEcccCCCeEEEEEcCCC
Q 044075 745 NMAENKCMTIAAHDCVISALAQSPVT 770 (786)
Q Consensus 745 Dl~~~~~~~~~~h~~~V~slafspdg 770 (786)
|+.+++...+....+.+...+|+|-.
T Consensus 401 dl~~g~~~~Lt~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 401 SLITKKTRKIVIGSGEKRFPSWGAFP 426 (428)
T ss_pred ECCCCCEEEeecCCCcccCceecCCC
Confidence 99998877776666778888998753
No 253
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.31 E-value=7e-09 Score=109.25 Aligned_cols=261 Identities=11% Similarity=0.142 Sum_probs=182.3
Q ss_pred cCCCCeEEEEEcCCCCEEEEEEC---CCeEEEEEcCC--Ceeee--ecCCCCCCeEEEEEccCCCEEEEEeC-CCcEEEE
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGH---DKKVVVWNMEN--FQTEC--TPDDHNHIITDVRFRPNSTQLATSSF-DKTVRIW 578 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~---Dg~V~IWdl~t--~~~~~--~l~~h~~~V~sl~fspdg~~Lasgs~-Dg~I~VW 578 (786)
.+.+.++-|+|+|+.++|.++-. +|.|..|.++. ++... .......+-+.+++++++++|+++.+ -|.|.++
T Consensus 37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~ 116 (346)
T COG2706 37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVY 116 (346)
T ss_pred cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEE
Confidence 36678999999999999998865 47788888874 33322 22222233488999999999999877 5889999
Q ss_pred cCCCCcceee--eecCCCCC----------eEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec------CCeEEE
Q 044075 579 DAAKPNFCLQ--TYTGHNNH----------VMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK------GGTVQV 640 (786)
Q Consensus 579 dl~s~~~~~~--~~~~h~~~----------V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~------~~i~~i 640 (786)
-+.....+.. ....|.+. +.+..+.|+++++++..=.--.|.+|++..+....... .+...|
T Consensus 117 p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi 196 (346)
T COG2706 117 PLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHI 196 (346)
T ss_pred EcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceE
Confidence 9866432211 22334444 88999999999887555456689999999765443221 567889
Q ss_pred EEeCCCCEEEEEEC-CCeEEEEEcCCC-cEEEEEec---------CCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCC-
Q 044075 641 RFQPRLGLLLAAAS-ENVVSIFDVETD-RLTHSFKG---------HSTEIHSVCWDTNGEYLASVSQD--SVRVWSLAS- 706 (786)
Q Consensus 641 ~~sp~g~~Ll~gs~-dg~I~iwD~~t~-~~i~~l~~---------h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s- 706 (786)
.|+|++++.++.++ +++|.+|..... ..+..+.. -..+...|.+++||++|.++... .|.+|.+..
T Consensus 197 ~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~ 276 (346)
T COG2706 197 VFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPD 276 (346)
T ss_pred EEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 99999999888887 799999998874 22222221 23456789999999999998766 788887764
Q ss_pred -Ce--eEEEEccCCCceEEEEEeCCCCEEEEEECCC-eEEEEECC--CCeEEEEc--ccCCCeEEEEEc
Q 044075 707 -GE--CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ-SLELWNMA--ENKCMTIA--AHDCVISALAQS 767 (786)
Q Consensus 707 -~~--~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg-~I~IwDl~--~~~~~~~~--~h~~~V~slafs 767 (786)
++ .+.....+...-+.+.|++.+++|+++..++ .|.+|.++ ++.+..+. .......||.|.
T Consensus 277 ~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~ 345 (346)
T COG2706 277 GGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL 345 (346)
T ss_pred CCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence 32 2223333444578899999999999998775 78888654 45544222 334455566664
No 254
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.28 E-value=7.7e-09 Score=112.71 Aligned_cols=253 Identities=11% Similarity=0.102 Sum_probs=164.8
Q ss_pred CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeC----------CCcEEEEcCCCCcceeeeecC-C------
Q 044075 531 KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSF----------DKTVRIWDAAKPNFCLQTYTG-H------ 593 (786)
Q Consensus 531 g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~----------Dg~I~VWdl~s~~~~~~~~~~-h------ 593 (786)
+.|.|.|..+.+.+..+..-..+- .+ ++||++.|+++.. +..|.|||+.+.+. +..+.- .
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~-~~~i~~p~~p~~~~ 103 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLP-IADIELPEGPRFLV 103 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcE-EeEEccCCCchhhc
Confidence 899999999999988885443333 24 9999998887765 78999999999874 333331 1
Q ss_pred CCCeEEEEEecCCCeEEEEEcC-CCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC-cE-EE
Q 044075 594 NNHVMSLDFHPKKNDLFCSCDG-NSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETD-RL-TH 670 (786)
Q Consensus 594 ~~~V~sl~~sp~g~~ll~sgs~-Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~-~~-i~ 670 (786)
......++++|+|+.++++--. +..|.++|+.+++.+....-+-....+-.....+.+.|.||......+.+. +. ..
T Consensus 104 ~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~ 183 (352)
T TIGR02658 104 GTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIK 183 (352)
T ss_pred cCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEe
Confidence 1234478999999998866644 899999999999988766532211111111112223344554444333221 11 11
Q ss_pred E---EecCCCCEE-EEEEcC-CCCEEEEEeCCeEEEEECCCC-----eeEEEEccC-------CCceEEEEEeCCCCEEE
Q 044075 671 S---FKGHSTEIH-SVCWDT-NGEYLASVSQDSVRVWSLASG-----ECIHELSSS-------GNKFHSCIFHPSYPTLM 733 (786)
Q Consensus 671 ~---l~~h~~~I~-sv~~sp-dg~~Lasgs~D~I~vwDl~s~-----~~i~~l~~~-------~~~I~sv~fspdg~~L~ 733 (786)
. +.....++. .-.|.+ +|+++++..+++|.+.|+... +.+..+... .+.+.-++++++++.++
T Consensus 184 ~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~ly 263 (352)
T TIGR02658 184 PTEVFHPEDEYLINHPAYSNKSGRLVWPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIY 263 (352)
T ss_pred eeeeecCCccccccCCceEcCCCcEEEEecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEE
Confidence 1 111001110 003445 888888888889999996442 233322211 22344599999999988
Q ss_pred EEE----------CCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCC-EEEEEe-CCCcEEEeC
Q 044075 734 VIG----------GYQSLELWNMAENKCMTIAAHDCVISALAQSPVTG-MVASAS-HDKSVKIWK 786 (786)
Q Consensus 734 sgs----------~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~-~LaSgs-~DG~I~IWd 786 (786)
+.. ..+.|.++|..+++.+....-...+..++++||++ +|++.. .++.|.|+|
T Consensus 264 V~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD 328 (352)
T TIGR02658 264 LLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFD 328 (352)
T ss_pred EEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEE
Confidence 853 12479999999999987766677899999999999 887666 578888875
No 255
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.24 E-value=7.7e-10 Score=123.31 Aligned_cols=274 Identities=15% Similarity=0.212 Sum_probs=195.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC---------------eeeeecCCCCCCeEEEEEccCCCEEEEEeCC
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF---------------QTECTPDDHNHIITDVRFRPNSTQLATSSFD 572 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~---------------~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D 572 (786)
...+..|++|+....++|+|+.||.++|..+.+. ..-.++.+|...|.-+.|+.+...|-++..+
T Consensus 13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~ 92 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTS 92 (1189)
T ss_pred CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCC
Confidence 3456899999999999999999999999987642 1224568999999999999999999999999
Q ss_pred CcEEEEcCCCCcceeeeec-CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE-eecC-CeEEEEEeCCCCEE
Q 044075 573 KTVRIWDAAKPNFCLQTYT-GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR-ISKG-GTVQVRFQPRLGLL 649 (786)
Q Consensus 573 g~I~VWdl~s~~~~~~~~~-~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~-~~~~-~i~~i~~sp~g~~L 649 (786)
|.|.||-+-.+.++..... ...+.|.+++|+.+|..+. ....||.|.+=.++...... ..++ ....+.|++|.+.+
T Consensus 93 GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIc-IvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~ 171 (1189)
T KOG2041|consen 93 GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKIC-IVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQA 171 (1189)
T ss_pred ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEE-EEEccCCEEEEeeccceecchhcchheccceeecccHHHH
Confidence 9999999988776443332 3456789999999988765 66779998887777654432 1222 23468899999999
Q ss_pred EEEECCCeEEEEEcCCC-------cEE----EEEecCCCCEEEEEEc--------CCCCEEEEEeCC-eEEEEECCCCee
Q 044075 650 LAAASENVVSIFDVETD-------RLT----HSFKGHSTEIHSVCWD--------TNGEYLASVSQD-SVRVWSLASGEC 709 (786)
Q Consensus 650 l~gs~dg~I~iwD~~t~-------~~i----~~l~~h~~~I~sv~~s--------pdg~~Lasgs~D-~I~vwDl~s~~~ 709 (786)
+.+-..|.+.+||.... .+. ..+......|-.++|. |+...|++|-.+ .+.|..-.+...
T Consensus 172 Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~ 251 (1189)
T KOG2041|consen 172 LFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPE 251 (1189)
T ss_pred HhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCC
Confidence 99999999999997643 111 1122233446677774 466778888777 666654433322
Q ss_pred EEEEccCCCceEEEEEeCCCCEEEEEECCC---------eEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCC
Q 044075 710 IHELSSSGNKFHSCIFHPSYPTLMVIGGYQ---------SLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDK 780 (786)
Q Consensus 710 i~~l~~~~~~I~sv~fspdg~~L~sgs~dg---------~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG 780 (786)
...+. .+-.+..+.|+++|..|++++.+. .|.+|..-..-.-++......|++++|-..|-.++.+ .|+
T Consensus 252 Pvv~d-tgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~G~i~gtlkvpg~~It~lsWEg~gLriA~A-vds 329 (1189)
T KOG2041|consen 252 PVVVD-TGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPYGHIVGTLKVPGSCITGLSWEGTGLRIAIA-VDS 329 (1189)
T ss_pred CeEEe-cccEeecceecCCCcEEEEccCcccccCccccceEEEeccchhheEEEecCCceeeeeEEcCCceEEEEE-ecc
Confidence 21222 236788899999999999998753 5666655444444666677889999998766666554 355
Q ss_pred cEEE
Q 044075 781 SVKI 784 (786)
Q Consensus 781 ~I~I 784 (786)
.|.+
T Consensus 330 fiyf 333 (1189)
T KOG2041|consen 330 FIYF 333 (1189)
T ss_pred eEEE
Confidence 5543
No 256
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.23 E-value=3.5e-09 Score=120.17 Aligned_cols=210 Identities=12% Similarity=0.128 Sum_probs=139.9
Q ss_pred cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCe--EEEEEcCCC--cEEEEeCCCCeeeEe--ecCCeEEEEEeCCCC
Q 044075 574 TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKND--LFCSCDGNS--EIRFWNLSQYSCARI--SKGGTVQVRFQPRLG 647 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~--ll~sgs~Dg--~I~iwDl~~~~~~~~--~~~~i~~i~~sp~g~ 647 (786)
.|.+.|.+... .+.+......+.+-.|+|+|+. ++++...+| .|++.++..++.... +.+......|+|||+
T Consensus 166 ~l~~~d~dG~~--~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~ 243 (428)
T PRK01029 166 ELWSVDYDGQN--LRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTFSPRKK 243 (428)
T ss_pred eEEEEcCCCCC--ceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEECCCCC
Confidence 56667766544 3444445566778899999976 333444443 588888887664443 446666789999999
Q ss_pred EEEEEEC-CC----eEEEEEcCCC---cEEEEEecCCCCEEEEEEcCCCCEEEEEeC-C---eEEEEECCC-CeeEEEEc
Q 044075 648 LLLAAAS-EN----VVSIFDVETD---RLTHSFKGHSTEIHSVCWDTNGEYLASVSQ-D---SVRVWSLAS-GECIHELS 714 (786)
Q Consensus 648 ~Ll~gs~-dg----~I~iwD~~t~---~~i~~l~~h~~~I~sv~~spdg~~Lasgs~-D---~I~vwDl~s-~~~i~~l~ 714 (786)
.|+.... +| .+.+|++..+ +.......+.......+|+|||+.|+..+. + .|.++++.. +.....+.
T Consensus 244 ~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt 323 (428)
T PRK01029 244 LLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLT 323 (428)
T ss_pred EEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEec
Confidence 9887764 22 3444676652 333333323334567899999998887764 2 466666643 33344555
Q ss_pred cCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeC-CC--cEEEe
Q 044075 715 SSGNKFHSCIFHPSYPTLMVIGGY---QSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASH-DK--SVKIW 785 (786)
Q Consensus 715 ~~~~~I~sv~fspdg~~L~sgs~d---g~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~-DG--~I~IW 785 (786)
.....+....|+|+|+.|+..+.+ ..|++||+.+++...+......+.+..|+|||++|+..+. ++ .|.+|
T Consensus 324 ~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~v 400 (428)
T PRK01029 324 KKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLI 400 (428)
T ss_pred cCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEE
Confidence 555667788999999999887654 3799999999988777655557788999999997765433 33 45544
No 257
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.21 E-value=5.3e-08 Score=106.21 Aligned_cols=232 Identities=11% Similarity=0.119 Sum_probs=149.7
Q ss_pred EcCCCCEEEEEEC----------CCeEEEEEcCCCeeeeecCCCC-------CCeEEEEEccCCCEEEEEeC--CCcEEE
Q 044075 517 FSSDGKLLASAGH----------DKKVVVWNMENFQTECTPDDHN-------HIITDVRFRPNSTQLATSSF--DKTVRI 577 (786)
Q Consensus 517 fSpdg~~Lasgs~----------Dg~V~IWdl~t~~~~~~l~~h~-------~~V~sl~fspdg~~Lasgs~--Dg~I~V 577 (786)
+||||+.|+++.. +..|.|||+.+.+.+..+..-. .....++++|||++|++... +..|.|
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~V 132 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGV 132 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEE
Confidence 9999999887765 7899999999999998886422 23347899999999998763 689999
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE-----eecC---Ce-EEEEEeC-CCC
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR-----ISKG---GT-VQVRFQP-RLG 647 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~-----~~~~---~i-~~i~~sp-~g~ 647 (786)
.|+.+.+. +..+.- .+...-+..+ +..+++ - +.||......+....... .+.. .+ ..-.|.+ ++.
T Consensus 133 vD~~~~kv-v~ei~v-p~~~~vy~t~-e~~~~~-~-~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~ 207 (352)
T TIGR02658 133 VDLEGKAF-VRMMDV-PDCYHIFPTA-NDTFFM-H-CRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGR 207 (352)
T ss_pred EECCCCcE-EEEEeC-CCCcEEEEec-CCccEE-E-eecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCc
Confidence 99999874 333322 1111111121 111111 1 124443333322211111 1111 00 0003455 777
Q ss_pred EEEEEECCCeEEEEEcCCC-----cEEEEEec-------CCCCEEEEEEcCCCCEEEEEe----------C-CeEEEEEC
Q 044075 648 LLLAAASENVVSIFDVETD-----RLTHSFKG-------HSTEIHSVCWDTNGEYLASVS----------Q-DSVRVWSL 704 (786)
Q Consensus 648 ~Ll~gs~dg~I~iwD~~t~-----~~i~~l~~-------h~~~I~sv~~spdg~~Lasgs----------~-D~I~vwDl 704 (786)
++++... |.|++.|+... ..+..+.. ....+.-++++++++.+++.. . +.|.++|.
T Consensus 208 ~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~ 286 (352)
T TIGR02658 208 LVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDA 286 (352)
T ss_pred EEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEEC
Confidence 7776666 99999996443 33322211 223344599999999888743 1 37999999
Q ss_pred CCCeeEEEEccCCCceEEEEEeCCCC-EEEEEE-CCCeEEEEECCCCeEEEEc
Q 044075 705 ASGECIHELSSSGNKFHSCIFHPSYP-TLMVIG-GYQSLELWNMAENKCMTIA 755 (786)
Q Consensus 705 ~s~~~i~~l~~~~~~I~sv~fspdg~-~L~sgs-~dg~I~IwDl~~~~~~~~~ 755 (786)
.+++.+..+.. ...+..++++||++ .|++.. .++.|.++|..+++.+...
T Consensus 287 ~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 287 KTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred CCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 99999998865 46889999999999 777666 4678999999999877443
No 258
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.18 E-value=2.5e-09 Score=117.56 Aligned_cols=248 Identities=13% Similarity=0.189 Sum_probs=172.3
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCC--EEEE-----EeCCCcEEEEcCCCCcc
Q 044075 513 TCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNST--QLAT-----SSFDKTVRIWDAAKPNF 585 (786)
Q Consensus 513 ~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~--~Las-----gs~Dg~I~VWdl~s~~~ 585 (786)
+++.|+.|..+.|-- ..+.|.+|++.+.+.+.. .-|...|+.+.++|.+. .+|+ .+.-+.|+||.+.....
T Consensus 129 W~~qfs~dEsl~arl-v~nev~f~~~~~f~~~~~-kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~ 206 (566)
T KOG2315|consen 129 WVPQFSIDESLAARL-VSNEVQFYDLGSFKTIQH-KLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQ 206 (566)
T ss_pred cccccccchhhhhhh-hcceEEEEecCCccceee-eeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccc
Confidence 689999987654432 357899999988544322 34677899999999732 3333 24456799998763221
Q ss_pred --eeeeecCCCCCeEEEEEecCCCeEEEEEcC-----------CCcEEEEeCCCCeeeEee--cCCeEEEEEeCCCCEEE
Q 044075 586 --CLQTYTGHNNHVMSLDFHPKKNDLFCSCDG-----------NSEIRFWNLSQYSCARIS--KGGTVQVRFQPRLGLLL 650 (786)
Q Consensus 586 --~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~-----------Dg~I~iwDl~~~~~~~~~--~~~i~~i~~sp~g~~Ll 650 (786)
.+..-.-....-..+.|++-+..|++..+. ..++++.++...++.... .++|.+++|+++++.|+
T Consensus 207 ~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~ 286 (566)
T KOG2315|consen 207 HQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFA 286 (566)
T ss_pred cchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEE
Confidence 111111112334567888888777665543 246888888855554433 48999999999998776
Q ss_pred EEEC--CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEE
Q 044075 651 AAAS--ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCI 724 (786)
Q Consensus 651 ~gs~--dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~ 724 (786)
++.. -..+.|||++ +.++..+ ..++-+++-|+|.|++|+.++-+ .|-|||+.+.+++..+.... .+-+.
T Consensus 287 VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~--tt~~e 361 (566)
T KOG2315|consen 287 VVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN--TTVFE 361 (566)
T ss_pred EEEecccceEEEEcCC-CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC--ceEEE
Confidence 6554 5789999997 4566555 35677899999999999988865 59999999999988887643 45679
Q ss_pred EeCCCCEEEEEEC------CCeEEEEECCCCeEEEEcccCCCeEEEEEcC
Q 044075 725 FHPSYPTLMVIGG------YQSLELWNMAENKCMTIAAHDCVISALAQSP 768 (786)
Q Consensus 725 fspdg~~L~sgs~------dg~I~IwDl~~~~~~~~~~h~~~V~slafsp 768 (786)
|+|||.+|++++. |+.++||+........ .......+.+.|-|
T Consensus 362 W~PdGe~flTATTaPRlrvdNg~KiwhytG~~l~~-~~f~sEL~qv~W~P 410 (566)
T KOG2315|consen 362 WSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLLHE-KMFKSELLQVEWRP 410 (566)
T ss_pred EcCCCcEEEEEeccccEEecCCeEEEEecCceeeh-hhhhHhHhheeeee
Confidence 9999999999986 5789999987654331 11112566677765
No 259
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.18 E-value=3.3e-09 Score=115.24 Aligned_cols=269 Identities=16% Similarity=0.178 Sum_probs=187.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCC--------------
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDK-------------- 573 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg-------------- 573 (786)
-.-++..++|||.|.+|++....+ |.+|.-..+..+..+.. ..|..+.|+|++++|.+=+...
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~l~~~~~--~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~ 107 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKAKLVRFRH--PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSK 107 (561)
T ss_pred cCcchhheeecCcchheehhhccc-eEEccccchhheeeeec--CCceecccCcccceeeeeccCCccChhhccCCcccc
Confidence 345788999999999999876544 99999887776555543 3589999999999999865433
Q ss_pred -cEEEEcCCCCcceeeeecCCCCC--eE-EEEEecCCCeEEEEEcCCCcEEEEeCCCCee----eEeec-CCeEEEEEeC
Q 044075 574 -TVRIWDAAKPNFCLQTYTGHNNH--VM-SLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC----ARISK-GGTVQVRFQP 644 (786)
Q Consensus 574 -~I~VWdl~s~~~~~~~~~~h~~~--V~-sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~----~~~~~-~~i~~i~~sp 644 (786)
.+.|||+.++. ++..+.....+ .+ -+.|+-++.+++-. -...++|+++ +... ...++ .++....|+|
T Consensus 108 n~~~vwd~~sg~-iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv--v~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP 183 (561)
T COG5354 108 NNVFVWDIASGM-IVFSFNGISQPYLGWPVLKFSIDDKYVARV--VGSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISP 183 (561)
T ss_pred CceeEEeccCce-eEeeccccCCcccccceeeeeecchhhhhh--ccCeEEEEec-CCccccCchhhccccceeeEEecC
Confidence 49999999876 56666655544 44 57787776654433 2457899997 3221 12222 6777888888
Q ss_pred CCCE--EEEE-----ECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEe------------CCeEEEEECC
Q 044075 645 RLGL--LLAA-----ASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVS------------QDSVRVWSLA 705 (786)
Q Consensus 645 ~g~~--Ll~g-----s~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs------------~D~I~vwDl~ 705 (786)
.++. |++- ...+.+++|.+..+..+.+..-....=..+.|.+.|++|++-- +..+.|+++.
T Consensus 184 ~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~ 263 (561)
T COG5354 184 EGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRIT 263 (561)
T ss_pred CCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeec
Confidence 7532 3332 2357899999987766554433333445688999999877542 1258888887
Q ss_pred CCeeEEEEccCCCceEEEEEeCCCCEEEEEE--CCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCC---C
Q 044075 706 SGECIHELSSSGNKFHSCIFHPSYPTLMVIG--GYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHD---K 780 (786)
Q Consensus 706 s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs--~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~D---G 780 (786)
...+.-.. ...++|..++|.|.++.+++++ .+-.+.++|++.+ +........=..+.|+|.+++++.++-| |
T Consensus 264 e~~i~V~~-~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l~~~~Pe~~rNT~~fsp~~r~il~agF~nl~g 340 (561)
T COG5354 264 ERSIPVEK-DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN--LRFYFPEQKRNTIFFSPHERYILFAGFDNLQG 340 (561)
T ss_pred ccccceec-cccccceeeeecccCCceeEEecccccceeecccccc--eEEecCCcccccccccCcccEEEEecCCcccc
Confidence 54433332 5578999999999998887776 4558999999988 4444445555667888888888887766 5
Q ss_pred cEEEeC
Q 044075 781 SVKIWK 786 (786)
Q Consensus 781 ~I~IWd 786 (786)
.|-|||
T Consensus 341 ni~i~~ 346 (561)
T COG5354 341 NIEIFD 346 (561)
T ss_pred ceEEec
Confidence 577765
No 260
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.17 E-value=1.2e-09 Score=120.97 Aligned_cols=205 Identities=10% Similarity=0.179 Sum_probs=151.5
Q ss_pred CCCCEEEEEECCCeEEEEEcCCCeeeeecCC---CCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCC
Q 044075 519 SDGKLLASAGHDKKVVVWNMENFQTECTPDD---HNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNN 595 (786)
Q Consensus 519 pdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~---h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~ 595 (786)
|-..++|....||.++||+..+.+....+.. -++..++..|. +.-+..+.+...- .
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~-------------------L~~~~s~~k~~~~--~ 61 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWG-------------------LSADYSPMKWLSL--E 61 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEE-------------------EEeccchHHHHhH--H
Confidence 4466888889999999999988777665532 22334444443 1111111111000 0
Q ss_pred CeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-----CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEE
Q 044075 596 HVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-----GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTH 670 (786)
Q Consensus 596 ~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-----~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~ 670 (786)
.+.. ...+..+++-|...|.|.+|++..++....+. +.+.++.++.+-..|.+++.|+.+..|+......++
T Consensus 62 ~~~~---~s~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~ 138 (541)
T KOG4547|consen 62 KAKK---ASLDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIR 138 (541)
T ss_pred HHhh---ccCCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeee
Confidence 0000 01234566678888999999999888776554 567888888888999999999999999999999999
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCC-----CCEEEEEE-CCCeEEEE
Q 044075 671 SFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPS-----YPTLMVIG-GYQSLELW 744 (786)
Q Consensus 671 ~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspd-----g~~L~sgs-~dg~I~Iw 744 (786)
.+..-...+.++|++||+..+++++. .|++||+++++.+.+|.+|.++|.++.|... |.+++++. .+..|.+|
T Consensus 139 ~~~~~~~~~~sl~is~D~~~l~~as~-~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w 217 (541)
T KOG4547|consen 139 IWKEQKPLVSSLCISPDGKILLTASR-QIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVW 217 (541)
T ss_pred eeccCCCccceEEEcCCCCEEEeccc-eEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEE
Confidence 99998999999999999999987764 6999999999999999999999999999877 66766654 34467778
Q ss_pred ECCC
Q 044075 745 NMAE 748 (786)
Q Consensus 745 Dl~~ 748 (786)
-+..
T Consensus 218 ~v~~ 221 (541)
T KOG4547|consen 218 VVEK 221 (541)
T ss_pred EEEc
Confidence 6654
No 261
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.16 E-value=6.4e-09 Score=113.79 Aligned_cols=268 Identities=12% Similarity=0.197 Sum_probs=178.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEEC-----------CCeEEEEEcCCCeeeeecCCCC--CCe-EEEEEccCCCEEEEEeCCC
Q 044075 508 SSSKVTCCHFSSDGKLLASAGH-----------DKKVVVWNMENFQTECTPDDHN--HII-TDVRFRPNSTQLATSSFDK 573 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~-----------Dg~V~IWdl~t~~~~~~l~~h~--~~V-~sl~fspdg~~Lasgs~Dg 573 (786)
|. .|.-+.|||+.+||+|-+. ...++|||+.+|...+.+.... ..+ .-+.||.|++++|.-.. .
T Consensus 249 Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~ 326 (698)
T KOG2314|consen 249 HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-N 326 (698)
T ss_pred CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-c
Confidence 44 4899999999999999652 2579999999999888875522 222 34689999999987776 4
Q ss_pred cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC----CcEEEEeCCCCeeeEeec---CCeEEEEEeCCC
Q 044075 574 TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN----SEIRFWNLSQYSCARISK---GGTVQVRFQPRL 646 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D----g~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g 646 (786)
+|.||+..+-. ++..-.-.-..|....|+|.+..|.+-.-.. ..+.+-.+.+...++..+ -.-..+.|..+|
T Consensus 327 sisIyEtpsf~-lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~g 405 (698)
T KOG2314|consen 327 SISIYETPSFM-LLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSG 405 (698)
T ss_pred eEEEEecCcee-eecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCC
Confidence 69999876532 1211122235688899999866444322221 345566666555554433 222345677777
Q ss_pred CEEEEEEC----------CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCC-C---e
Q 044075 647 GLLLAAAS----------ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLAS-G---E 708 (786)
Q Consensus 647 ~~Ll~gs~----------dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s-~---~ 708 (786)
.+|.+--. -..+.||.++....-.....-...|...+|.|.|+.+++.+.. ++.+|.+++ . +
T Consensus 406 dyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~ 485 (698)
T KOG2314|consen 406 DYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPS 485 (698)
T ss_pred cEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchh
Confidence 77765432 1235666666553322222356789999999999988776644 688998873 2 3
Q ss_pred eEEEEccCCCceEEEEEeCCCCEEEEEEC---CCeEEEEECCCCeEE--EEcccCCCeEEEEEcCCCCEEEEEeCCCc
Q 044075 709 CIHELSSSGNKFHSCIFHPSYPTLMVIGG---YQSLELWNMAENKCM--TIAAHDCVISALAQSPVTGMVASASHDKS 781 (786)
Q Consensus 709 ~i~~l~~~~~~I~sv~fspdg~~L~sgs~---dg~I~IwDl~~~~~~--~~~~h~~~V~slafspdg~~LaSgs~DG~ 781 (786)
.+..+. ....+.+.|+|.|.++++++. .|.+.++|+....+. ....| ...+.+.|.|.|+|+++++.-..
T Consensus 486 lVk~~d--k~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh-~~at~veWDPtGRYvvT~ss~wr 560 (698)
T KOG2314|consen 486 LVKELD--KKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEH-FAATEVEWDPTGRYVVTSSSSWR 560 (698)
T ss_pred hhhhhc--ccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccc-cccccceECCCCCEEEEeeehhh
Confidence 344443 245678999999999887754 578999999853332 33334 34678999999999999987543
No 262
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.15 E-value=2e-10 Score=128.57 Aligned_cols=276 Identities=16% Similarity=0.313 Sum_probs=196.5
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC-CeeeeecCCCC--CCeEEEEEccCC--CEEEEEeCCCcEEEEcCCCC
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN-FQTECTPDDHN--HIITDVRFRPNS--TQLATSSFDKTVRIWDAAKP 583 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t-~~~~~~l~~h~--~~V~sl~fspdg--~~Lasgs~Dg~I~VWdl~s~ 583 (786)
.+.+.++.++|.|+-+|.++.-| +.+-|+.. +....-+ .|. -.|-.+.|+|.. .+-++......-.||++...
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l-~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~s 101 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWL-HHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKS 101 (1081)
T ss_pred cCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceee-eccCcchhcceecccCCCCceeEEecCcchhhhhhhhcC
Confidence 45688899999999999998777 55567664 3333322 232 346778888743 34444444556678988543
Q ss_pred --cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee----EeecCCeEEEEEeCCCCEEEEEECCCe
Q 044075 584 --NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA----RISKGGTVQVRFQPRLGLLLAAASENV 657 (786)
Q Consensus 584 --~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~----~~~~~~i~~i~~sp~g~~Ll~gs~dg~ 657 (786)
..+...+.+|...|+.+.|+|....++++|+.|-.+..||+++.... .........++|+.....+++.+..+.
T Consensus 102 s~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~ 181 (1081)
T KOG0309|consen 102 SSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGND 181 (1081)
T ss_pred CccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCc
Confidence 33445677999999999999999999999999999999999875432 223356678999988888999999999
Q ss_pred EEEEEcCCC-cEEEEEecCCCCEEEEEEcC-CCCEEEEEeCC-eEEEEECCCCeeE-EEEccCCCceEEEEEeCCCCEEE
Q 044075 658 VSIFDVETD-RLTHSFKGHSTEIHSVCWDT-NGEYLASVSQD-SVRVWSLASGECI-HELSSSGNKFHSCIFHPSYPTLM 733 (786)
Q Consensus 658 I~iwD~~t~-~~i~~l~~h~~~I~sv~~sp-dg~~Lasgs~D-~I~vwDl~s~~~i-~~l~~~~~~I~sv~fspdg~~L~ 733 (786)
|.+||.+.+ .++..+++|...|+.+.|.. ....+.+++.| +|+.||....... ........+|..-.+.|-|.-.+
T Consensus 182 i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~ 261 (1081)
T KOG0309|consen 182 IFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYC 261 (1081)
T ss_pred eEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeE
Confidence 999999987 78889999999999999865 23456677777 9999998765322 22223456777777777655333
Q ss_pred EE--ECCCeEEEEECCC---------C--eEEEEcccCCCeEEEEEcCCCC----------EEEEEeCCCcEEEeC
Q 044075 734 VI--GGYQSLELWNMAE---------N--KCMTIAAHDCVISALAQSPVTG----------MVASASHDKSVKIWK 786 (786)
Q Consensus 734 sg--s~dg~I~IwDl~~---------~--~~~~~~~h~~~V~slafspdg~----------~LaSgs~DG~I~IWd 786 (786)
.- -++..+.+++.++ + .+.++.+|.+.|...-|-..+. .|+|-+.|.++++|-
T Consensus 262 ~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWp 337 (1081)
T KOG0309|consen 262 IMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWP 337 (1081)
T ss_pred eccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeee
Confidence 22 2233455544332 2 1237789999887777654222 699999999999993
No 263
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.14 E-value=4e-08 Score=105.81 Aligned_cols=272 Identities=11% Similarity=0.107 Sum_probs=185.0
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcC-CCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNME-NFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVR 576 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~-t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~ 576 (786)
.|+.+..+.+|-+.- .+-. ++..+....||.=.||+++ +++-++.....++ -.+=..+.||+.++... .|.|.
T Consensus 217 tFeK~vdl~~~vS~P---mIV~-~RvYFlsD~eG~GnlYSvdldGkDlrrHTnFtd-YY~R~~nsDGkrIvFq~-~GdIy 290 (668)
T COG4946 217 TFEKFVDLDGNVSSP---MIVG-ERVYFLSDHEGVGNLYSVDLDGKDLRRHTNFTD-YYPRNANSDGKRIVFQN-AGDIY 290 (668)
T ss_pred ceeeeeecCCCcCCc---eEEc-ceEEEEecccCccceEEeccCCchhhhcCCchh-ccccccCCCCcEEEEec-CCcEE
Confidence 667777777664432 2221 2333344567766666554 2332222211111 12333456888777643 57899
Q ss_pred EEcCCCCcceeeeec-----CCC-----CCeEEEE-EecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-CCeEEEEEeC
Q 044075 577 IWDAAKPNFCLQTYT-----GHN-----NHVMSLD-FHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-GGTVQVRFQP 644 (786)
Q Consensus 577 VWdl~s~~~~~~~~~-----~h~-----~~V~sl~-~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-~~i~~i~~sp 644 (786)
+||.++.......+. ... .+..-+. |++-...+++..+ .|...+.+...+-.+.+-+ +.+.-..+..
T Consensus 291 lydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VS-RGkaFi~~~~~~~~iqv~~~~~VrY~r~~~ 369 (668)
T COG4946 291 LYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVS-RGKAFIMRPWDGYSIQVGKKGGVRYRRIQV 369 (668)
T ss_pred EeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEe-cCcEEEECCCCCeeEEcCCCCceEEEEEcc
Confidence 999987652211111 000 1111111 3443444555555 5778888777666665543 6677777888
Q ss_pred CCCEEEEEECCC-eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEE
Q 044075 645 RLGLLLAAASEN-VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHS 722 (786)
Q Consensus 645 ~g~~Ll~gs~dg-~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~s 722 (786)
+.+.++.|..|| .|-|||.++++.. .+...-+.|.++..+++|++++++.+. .|.++|+.+++....-+...+-|+.
T Consensus 370 ~~e~~vigt~dgD~l~iyd~~~~e~k-r~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItd 448 (668)
T COG4946 370 DPEGDVIGTNDGDKLGIYDKDGGEVK-RIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITD 448 (668)
T ss_pred CCcceEEeccCCceEEEEecCCceEE-EeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEE
Confidence 888899999998 8999999987644 455567889999999999999998888 9999999999876666666788999
Q ss_pred EEEeCCCCEEEEEECCC----eEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEe
Q 044075 723 CIFHPSYPTLMVIGGYQ----SLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASAS 777 (786)
Q Consensus 723 v~fspdg~~L~sgs~dg----~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs 777 (786)
+.|||++++++.+--+| .|++||+.+++........+.=.+-+|.||+++|+--+
T Consensus 449 f~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 449 FDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred EEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEEEEEe
Confidence 99999999999988776 79999999999987776666667889999999876544
No 264
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.14 E-value=7.4e-10 Score=113.34 Aligned_cols=236 Identities=19% Similarity=0.356 Sum_probs=165.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe-----eeeecCCCC------------CCeEEEEEccCC--CEEEE
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ-----TECTPDDHN------------HIITDVRFRPNS--TQLAT 568 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~-----~~~~l~~h~------------~~V~sl~fspdg--~~Las 568 (786)
..+.|+++.|...|.||++|...|.|.+|.-+... ....+..|. ..|..|.|..++ ..++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 34679999999999999999999999999765322 222344443 457888898754 35777
Q ss_pred EeCCCcEEEEcCCCCc-----------------------------------------ceeeee-cCCCCCeEEEEEecCC
Q 044075 569 SSFDKTVRIWDAAKPN-----------------------------------------FCLQTY-TGHNNHVMSLDFHPKK 606 (786)
Q Consensus 569 gs~Dg~I~VWdl~s~~-----------------------------------------~~~~~~-~~h~~~V~sl~~sp~g 606 (786)
.+.|.+|++|.+.... .+.+.+ ..|...|.+|.|..+.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 7889999999875431 001111 4577889999999887
Q ss_pred CeEEEEEcCCCcEEEEeCCCCe----eeEee-------cCCeEEEEEeCCCC-EEEEEECCCeEEEEEcCCCcEE-----
Q 044075 607 NDLFCSCDGNSEIRFWNLSQYS----CARIS-------KGGTVQVRFQPRLG-LLLAAASENVVSIFDVETDRLT----- 669 (786)
Q Consensus 607 ~~ll~sgs~Dg~I~iwDl~~~~----~~~~~-------~~~i~~i~~sp~g~-~Ll~gs~dg~I~iwD~~t~~~i----- 669 (786)
..++ ++ .|-.|.+|+++... .+.+. ..-+++..|+|... .+...++.|.|++.|++...+.
T Consensus 185 et~l-Sa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~k 262 (460)
T COG5170 185 ETLL-SA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKK 262 (460)
T ss_pred heee-ec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchh
Confidence 7665 54 47889999987422 11111 13456778988654 5666677899999999843211
Q ss_pred -E----------EEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCC-eeEEEEccCC------------Cce---EE
Q 044075 670 -H----------SFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASG-ECIHELSSSG------------NKF---HS 722 (786)
Q Consensus 670 -~----------~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~-~~i~~l~~~~------------~~I---~s 722 (786)
. -+.+-...|..+.|+++|+||++-+.-+|+|||++.. .+++++..|. ..| ..
T Consensus 263 lfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFe 342 (460)
T COG5170 263 LFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFE 342 (460)
T ss_pred hhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEE
Confidence 1 1112345788999999999999877779999999864 5777775442 222 35
Q ss_pred EEEeCCCCEEEEEECCCeEEEEE
Q 044075 723 CIFHPSYPTLMVIGGYQSLELWN 745 (786)
Q Consensus 723 v~fspdg~~L~sgs~dg~I~IwD 745 (786)
|.|+.+.+.+++|+..+..-||-
T Consensus 343 isfSgd~~~v~sgsy~NNfgiyp 365 (460)
T COG5170 343 ISFSGDDKHVLSGSYSNNFGIYP 365 (460)
T ss_pred EEecCCcccccccccccceeeec
Confidence 78888889999998877777765
No 265
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.13 E-value=4.8e-09 Score=116.13 Aligned_cols=179 Identities=15% Similarity=0.256 Sum_probs=146.3
Q ss_pred CCCeEEEEEcCCCcEEEEeCCCCeeeEeec------CCeEEEEEe--------------------CCCCEEEEEECCCeE
Q 044075 605 KKNDLFCSCDGNSEIRFWNLSQYSCARISK------GGTVQVRFQ--------------------PRLGLLLAAASENVV 658 (786)
Q Consensus 605 ~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~------~~i~~i~~s--------------------p~g~~Ll~gs~dg~I 658 (786)
..-.+|+..+.||.+++||....+....+. +..++..|. .+...++.|...|.|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 344567788899999999998876654433 333333332 223467888889999
Q ss_pred EEEEcCCCcEEEEEe--cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEE
Q 044075 659 SIFDVETDRLTHSFK--GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVI 735 (786)
Q Consensus 659 ~iwD~~t~~~i~~l~--~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sg 735 (786)
.+|++..++....+. .|.+.|+++.++.+-..|.+++.| .+..|+......++.+......+.+++++||+..++++
T Consensus 83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~a 162 (541)
T KOG4547|consen 83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTA 162 (541)
T ss_pred EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEec
Confidence 999999999888887 499999999999999999999999 99999999999999999999999999999999988887
Q ss_pred ECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCC-----CCEEEE-EeCCCcEEEe
Q 044075 736 GGYQSLELWNMAENKCM-TIAAHDCVISALAQSPV-----TGMVAS-ASHDKSVKIW 785 (786)
Q Consensus 736 s~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspd-----g~~LaS-gs~DG~I~IW 785 (786)
+. .|.+||+++++.+ ++.+|.++|.++.|.-+ |.++.+ ...+..|.+|
T Consensus 163 s~--~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w 217 (541)
T KOG4547|consen 163 SR--QIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVW 217 (541)
T ss_pred cc--eEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEE
Confidence 75 7999999999887 77899999999999877 555554 4445567776
No 266
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.12 E-value=6.3e-08 Score=120.67 Aligned_cols=236 Identities=13% Similarity=0.149 Sum_probs=162.8
Q ss_pred EEEEEcCC-CCEEEEEECCCeEEEEEcCCCeeeeecCC--------------CCCCeEEEEEccCCCEEEEEeC-CCcEE
Q 044075 513 TCCHFSSD-GKLLASAGHDKKVVVWNMENFQTECTPDD--------------HNHIITDVRFRPNSTQLATSSF-DKTVR 576 (786)
Q Consensus 513 ~~lafSpd-g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~--------------h~~~V~sl~fspdg~~Lasgs~-Dg~I~ 576 (786)
..++++++ +.++++-..++.|++||... ..+..+.. +-.....|++.++++.|+++.. .+.|+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G-~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir 649 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDG-NFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR 649 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCC-CEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence 45788874 56677767788999999764 33333322 1123578999998887666654 56799
Q ss_pred EEcCCCCcceeeeecCC-----------------CCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-----
Q 044075 577 IWDAAKPNFCLQTYTGH-----------------NNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK----- 634 (786)
Q Consensus 577 VWdl~s~~~~~~~~~~h-----------------~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----- 634 (786)
++|+.++. +.++.+. -.....++|+|++..++++...++.|++||..++.......
T Consensus 650 ~id~~~~~--V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~ 727 (1057)
T PLN02919 650 EIDFVNET--VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYER 727 (1057)
T ss_pred EEecCCCE--EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccc
Confidence 99987754 3332110 12346899999778888888889999999998765432210
Q ss_pred ------------CCeEEEEEeCCCCEEEEEEC-CCeEEEEEcCCCcEEEEEec-------------C--------CCCEE
Q 044075 635 ------------GGTVQVRFQPRLGLLLAAAS-ENVVSIFDVETDRLTHSFKG-------------H--------STEIH 680 (786)
Q Consensus 635 ------------~~i~~i~~sp~g~~Ll~gs~-dg~I~iwD~~t~~~i~~l~~-------------h--------~~~I~ 680 (786)
.....++++|+++.|+++.. ++.|++||+.++.......+ + -....
T Consensus 728 ~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~ 807 (1057)
T PLN02919 728 NLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPL 807 (1057)
T ss_pred cCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCc
Confidence 12356899999986666555 68999999987653211100 0 11245
Q ss_pred EEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc-------------CCCceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 044075 681 SVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS-------------SGNKFHSCIFHPSYPTLMVIGGYQSLELWNM 746 (786)
Q Consensus 681 sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~-------------~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl 746 (786)
+++++++|.++++.+.+ .|++||..++........ .-.....++++++|+.+++-+.++.|++||+
T Consensus 808 Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~ 887 (1057)
T PLN02919 808 GVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDL 887 (1057)
T ss_pred eeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 88999999988887777 999999988765533211 1124678999999998887788889999999
Q ss_pred CCCeE
Q 044075 747 AENKC 751 (786)
Q Consensus 747 ~~~~~ 751 (786)
.+++.
T Consensus 888 ~~~~~ 892 (1057)
T PLN02919 888 NKGEA 892 (1057)
T ss_pred CCCcc
Confidence 88764
No 267
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.11 E-value=3.8e-08 Score=110.00 Aligned_cols=253 Identities=13% Similarity=0.054 Sum_probs=161.5
Q ss_pred CCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCe--
Q 044075 520 DGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHV-- 597 (786)
Q Consensus 520 dg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V-- 597 (786)
++..+++++.++.|..+|..+++.+....... .+.+.... .+..++.++.++.|+.||.++++. +..+......+
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~-~W~~~~~~~~~~~ 180 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLSS-EVLSPPLV-ANGLVVVRTNDGRLTALDAATGER-LWTYSRVTPALTL 180 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeeccCc-eeecCCEE-ECCEEEEECCCCeEEEEEcCCCce-eeEEccCCCceee
Confidence 46678888899999999999999887664332 22221111 345677788899999999998773 33322211111
Q ss_pred ---EEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC-------e---EEEEEe--CCCCEEEEEECCCeEEEEE
Q 044075 598 ---MSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG-------T---VQVRFQ--PRLGLLLAAASENVVSIFD 662 (786)
Q Consensus 598 ---~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~-------i---~~i~~s--p~g~~Ll~gs~dg~I~iwD 662 (786)
.+..+. +. .++.+..++.+..+|.++++.+...... + ..+.-+ -.+..+++++.++.++.||
T Consensus 181 ~~~~sp~~~--~~-~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d 257 (377)
T TIGR03300 181 RGSASPVIA--DG-GVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALD 257 (377)
T ss_pred cCCCCCEEE--CC-EEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEE
Confidence 111222 23 3456777899999999888765432210 0 001001 1356888889999999999
Q ss_pred cCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCC-ceEEEEEeCCCCEEEEEECCCe
Q 044075 663 VETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGN-KFHSCIFHPSYPTLMVIGGYQS 740 (786)
Q Consensus 663 ~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~-~I~sv~fspdg~~L~sgs~dg~ 740 (786)
.++++.+..... .. ..... ..+..+++++.+ .|..+|..+++.+........ .+.+... .+..|++++.+|.
T Consensus 258 ~~tG~~~W~~~~-~~-~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~ 331 (377)
T TIGR03300 258 LRSGRVLWKRDA-SS-YQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGY 331 (377)
T ss_pred CCCCcEEEeecc-CC-ccCce--EeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCE
Confidence 999988776652 11 12222 245667777777 999999999988766532222 2222223 3568999999999
Q ss_pred EEEEECCCCeEEE-EcccCCCe-EEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 741 LELWNMAENKCMT-IAAHDCVI-SALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 741 I~IwDl~~~~~~~-~~~h~~~V-~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|+++|..+++.+. ...+...+ .+..+. + +.|+.++.||.|..|.
T Consensus 332 l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~-~~l~v~~~dG~l~~~~ 377 (377)
T TIGR03300 332 LHWLSREDGSFVARLKTDGSGIASPPVVV-G-DGLLVQTRDGDLYAFR 377 (377)
T ss_pred EEEEECCCCCEEEEEEcCCCccccCCEEE-C-CEEEEEeCCceEEEeC
Confidence 9999999998873 33344333 333333 3 4588899999998763
No 268
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.10 E-value=6e-08 Score=120.89 Aligned_cols=229 Identities=12% Similarity=0.115 Sum_probs=156.6
Q ss_pred EEEEEccC-CCEEEEEeCCCcEEEEcCCCCcceeeeecC--------------CCCCeEEEEEecCCCeEEEEEcCCCcE
Q 044075 555 TDVRFRPN-STQLATSSFDKTVRIWDAAKPNFCLQTYTG--------------HNNHVMSLDFHPKKNDLFCSCDGNSEI 619 (786)
Q Consensus 555 ~sl~fspd-g~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~--------------h~~~V~sl~~sp~g~~ll~sgs~Dg~I 619 (786)
..++++++ +.++++-+.++.|++||..... +..+.+ +-.....|++.++++.++++-..++.|
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~--i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~I 648 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNF--IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHAL 648 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCCCE--EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceE
Confidence 46788874 5566666778889999986432 222221 112357899999888777666667889
Q ss_pred EEEeCCCCeeeEeec-------------------CCeEEEEEeCCCCE-EEEEECCCeEEEEEcCCCcEEEEEecC----
Q 044075 620 RFWNLSQYSCARISK-------------------GGTVQVRFQPRLGL-LLAAASENVVSIFDVETDRLTHSFKGH---- 675 (786)
Q Consensus 620 ~iwDl~~~~~~~~~~-------------------~~i~~i~~sp~g~~-Ll~gs~dg~I~iwD~~t~~~i~~l~~h---- 675 (786)
+++|+.++....... .....+++++++.. +++.+.++.|++||..++... .+.+.
T Consensus 649 r~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~ 727 (1057)
T PLN02919 649 REIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYER 727 (1057)
T ss_pred EEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccc
Confidence 999988765433211 12357899995555 455556789999999877542 22111
Q ss_pred -----------CCCEEEEEEcCCCCEEEEEe-CC-eEEEEECCCCeeEEEEc-------------cC--------CCceE
Q 044075 676 -----------STEIHSVCWDTNGEYLASVS-QD-SVRVWSLASGECIHELS-------------SS--------GNKFH 721 (786)
Q Consensus 676 -----------~~~I~sv~~spdg~~Lasgs-~D-~I~vwDl~s~~~i~~l~-------------~~--------~~~I~ 721 (786)
-.....|+|+|++..|+++. .+ .|++||+.++....... .. .....
T Consensus 728 ~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~ 807 (1057)
T PLN02919 728 NLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPL 807 (1057)
T ss_pred cCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCc
Confidence 12346799999998655554 44 99999998765321110 00 01235
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEccc--------------CCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 722 SCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAH--------------DCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 722 sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h--------------~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.++++++|..+++-..++.|++||..++.+..+.+. -.....|+++++|+++++-+.++.|++||
T Consensus 808 Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid 886 (1057)
T PLN02919 808 GVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLD 886 (1057)
T ss_pred eeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEE
Confidence 789999999877778888999999998877654432 12577899999999999888999999996
No 269
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.10 E-value=5.3e-09 Score=108.66 Aligned_cols=232 Identities=17% Similarity=0.335 Sum_probs=160.9
Q ss_pred ceeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecC------------CCCeEEEEEcCCCC--EEEEEECC
Q 044075 465 ESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKS------------SSKVTCCHFSSDGK--LLASAGHD 530 (786)
Q Consensus 465 ~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H------------~~~V~~lafSpdg~--~Lasgs~D 530 (786)
..+++.++..|+..+........ + .++....+..| ..+|..+.|.+++. .++..+.|
T Consensus 37 Ge~LatGdkgGRVv~f~r~~~~~--------~-ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNd 107 (433)
T KOG1354|consen 37 GERLATGDKGGRVVLFEREKLYK--------G-EYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTND 107 (433)
T ss_pred cceEeecCCCCeEEEeecccccc--------c-ceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCC
Confidence 34677777788877765443322 1 22222233333 35799999998654 46666789
Q ss_pred CeEEEEEcCCCeeee-----------------------------------ec-CCCCCCeEEEEEccCCCEEEEEeCCCc
Q 044075 531 KKVVVWNMENFQTEC-----------------------------------TP-DDHNHIITDVRFRPNSTQLATSSFDKT 574 (786)
Q Consensus 531 g~V~IWdl~t~~~~~-----------------------------------~l-~~h~~~V~sl~fspdg~~Lasgs~Dg~ 574 (786)
.+|++|.+....... .+ ..|...|.+|.++.|...++++. |=.
T Consensus 108 ktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSAD-dLR 186 (433)
T KOG1354|consen 108 KTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSAD-DLR 186 (433)
T ss_pred cceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeecc-cee
Confidence 999999876321111 11 35888899999999998887765 778
Q ss_pred EEEEcCCCCccee--eeecCC-----CCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE----e-----------
Q 044075 575 VRIWDAAKPNFCL--QTYTGH-----NNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR----I----------- 632 (786)
Q Consensus 575 I~VWdl~s~~~~~--~~~~~h-----~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~----~----------- 632 (786)
|.+|+++-...+. .-++.+ ..-|++..|||....+|+-.+..|+|++-|++...... .
T Consensus 187 INLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rs 266 (433)
T KOG1354|consen 187 INLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRS 266 (433)
T ss_pred eeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchh
Confidence 9999987544322 222332 34689999999998899888999999999998432111 0
Q ss_pred -ec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcC-CCcEEEEEecCC------------CCE---EEEEEcCCCCEEE
Q 044075 633 -SK---GGTVQVRFQPRLGLLLAAASENVVSIFDVE-TDRLTHSFKGHS------------TEI---HSVCWDTNGEYLA 692 (786)
Q Consensus 633 -~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~-t~~~i~~l~~h~------------~~I---~sv~~spdg~~La 692 (786)
+. ..|..+.|+..|+++++-.. -+|++||+. ..+++.++..|. ..| ..++|+.++.+++
T Consensus 267 ffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~ 345 (433)
T KOG1354|consen 267 FFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVM 345 (433)
T ss_pred hHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEe
Confidence 11 34677899999999887554 789999995 446666665542 222 4689999999999
Q ss_pred EEeCC-eEEEEECCCC
Q 044075 693 SVSQD-SVRVWSLASG 707 (786)
Q Consensus 693 sgs~D-~I~vwDl~s~ 707 (786)
+|+.. .+++|++..|
T Consensus 346 TGsy~n~frvf~~~~g 361 (433)
T KOG1354|consen 346 TGSYNNVFRVFNLARG 361 (433)
T ss_pred cccccceEEEecCCCC
Confidence 99998 9999997654
No 270
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.09 E-value=2.2e-07 Score=98.18 Aligned_cols=256 Identities=13% Similarity=0.142 Sum_probs=176.2
Q ss_pred CCeEEEEEcCCCeee---eecCCCCCCeEEEEEccCCCEEEEEeCC---CcEEEEcCCCCcceeeee---cCCCCCeEEE
Q 044075 530 DKKVVVWNMENFQTE---CTPDDHNHIITDVRFRPNSTQLATSSFD---KTVRIWDAAKPNFCLQTY---TGHNNHVMSL 600 (786)
Q Consensus 530 Dg~V~IWdl~t~~~~---~~l~~h~~~V~sl~fspdg~~Lasgs~D---g~I~VWdl~s~~~~~~~~---~~h~~~V~sl 600 (786)
+.-|++|++++..-. ...-.+...++-|+|+|+.++|+++..+ |.|..|.++.....+..+ .....+-+.+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv 94 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV 94 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence 456999999842211 1223566778999999999999988654 778888776531112221 1122334889
Q ss_pred EEecCCCeEEEEEcCCCcEEEEeCCC-CeeeEe-----ec----------CCeEEEEEeCCCCEEEEEECC-CeEEEEEc
Q 044075 601 DFHPKKNDLFCSCDGNSEIRFWNLSQ-YSCARI-----SK----------GGTVQVRFQPRLGLLLAAASE-NVVSIFDV 663 (786)
Q Consensus 601 ~~sp~g~~ll~sgs~Dg~I~iwDl~~-~~~~~~-----~~----------~~i~~i~~sp~g~~Ll~gs~d-g~I~iwD~ 663 (786)
++++++.+++++....|.|.++-+.. +..... +. .++....+.|++++|++.+-. ..|.+|++
T Consensus 95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~ 174 (346)
T COG2706 95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDL 174 (346)
T ss_pred EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEc
Confidence 99999999998888889999999865 322111 11 236677899999999988874 67999999
Q ss_pred CCCcEEEEEe---cCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCC----eeEEEEcc------CCCceEEEEEeCC
Q 044075 664 ETDRLTHSFK---GHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASG----ECIHELSS------SGNKFHSCIFHPS 728 (786)
Q Consensus 664 ~t~~~i~~l~---~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~----~~i~~l~~------~~~~I~sv~fspd 728 (786)
..+.+...-. .....-..|.|+|++++..+.++= +|.+|..... +.+..+.. .......+.++++
T Consensus 175 ~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~d 254 (346)
T COG2706 175 DDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPD 254 (346)
T ss_pred ccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCC
Confidence 9775433211 245567889999999998887763 8999988873 22222221 1345677889999
Q ss_pred CCEEEEEEC-CCeEEEEECCC--CeEE---EEcccCCCeEEEEEcCCCCEEEEEeCCC-cEEEe
Q 044075 729 YPTLMVIGG-YQSLELWNMAE--NKCM---TIAAHDCVISALAQSPVTGMVASASHDK-SVKIW 785 (786)
Q Consensus 729 g~~L~sgs~-dg~I~IwDl~~--~~~~---~~~~h~~~V~slafspdg~~LaSgs~DG-~I~IW 785 (786)
|++|+++.. ...|.+|.+.. +++. ....+...-.+..|++.+++|+++..|+ .|.||
T Consensus 255 GrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf 318 (346)
T COG2706 255 GRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVF 318 (346)
T ss_pred CCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEE
Confidence 998888754 34788887764 3332 2223444578899999999999988764 56665
No 271
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.06 E-value=1.2e-07 Score=107.05 Aligned_cols=225 Identities=10% Similarity=0.091 Sum_probs=148.7
Q ss_pred CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCE-EEEEeCC---CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCC
Q 044075 531 KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQ-LATSSFD---KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKK 606 (786)
Q Consensus 531 g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~-Lasgs~D---g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g 606 (786)
..|.+-|.+... ...+.... .+....|+||++. ++..+.+ ..|.++|+.+++. ..+....+.+....|+|++
T Consensus 169 ~~l~~~d~dg~~-~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~--~~lt~~~g~~~~~~~SPDG 244 (419)
T PRK04043 169 SNIVLADYTLTY-QKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKK--EKIASSQGMLVVSDVSKDG 244 (419)
T ss_pred ceEEEECCCCCc-eeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcE--EEEecCCCcEEeeEECCCC
Confidence 345555554333 33333333 7789999999984 6654443 4688899987763 3333345666778899999
Q ss_pred CeEEEEEcCC--CcEEEEeCCCCeeeEeecCC--eEEEEEeCCCCEEEEEECC-C--eEEEEEcCCCcEEEEEecCCCCE
Q 044075 607 NDLFCSCDGN--SEIRFWNLSQYSCARISKGG--TVQVRFQPRLGLLLAAASE-N--VVSIFDVETDRLTHSFKGHSTEI 679 (786)
Q Consensus 607 ~~ll~sgs~D--g~I~iwDl~~~~~~~~~~~~--i~~i~~sp~g~~Ll~gs~d-g--~I~iwD~~t~~~i~~l~~h~~~I 679 (786)
..++++.+.+ ..|+++|+..+......... .....|+|||+.|+..+.. + .|+++|+.+++....... ...
T Consensus 245 ~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~~- 322 (419)
T PRK04043 245 SKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GKN- 322 (419)
T ss_pred CEEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CCc-
Confidence 9988777654 46888898877665544432 3456899999988887753 2 689999988766443321 111
Q ss_pred EEEEEcCCCCEEEEEeC--------C--eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCC---eEEEEEC
Q 044075 680 HSVCWDTNGEYLASVSQ--------D--SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ---SLELWNM 746 (786)
Q Consensus 680 ~sv~~spdg~~Lasgs~--------D--~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg---~I~IwDl 746 (786)
...|+|||++|+..+. + .|.+.|+.++.. ..+... .......|+|||+.|+..+.++ .|.++++
T Consensus 323 -~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l 399 (419)
T PRK04043 323 -NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRL 399 (419)
T ss_pred -CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEec
Confidence 2489999998877653 2 578888887754 344333 2334688999999888877543 5778888
Q ss_pred CCCeEEEEcccCCCeEEE
Q 044075 747 AENKCMTIAAHDCVISAL 764 (786)
Q Consensus 747 ~~~~~~~~~~h~~~V~sl 764 (786)
.......+....+.|...
T Consensus 400 ~g~~~~~l~~~~g~~~~p 417 (419)
T PRK04043 400 NYNKSFLFPLKVGKIQSI 417 (419)
T ss_pred CCCeeEEeecCCCccCCC
Confidence 877666665544444433
No 272
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.05 E-value=2.7e-07 Score=113.13 Aligned_cols=276 Identities=14% Similarity=0.216 Sum_probs=186.3
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEE----EcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC-
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVW----NMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA- 581 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IW----dl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~- 581 (786)
...+.|.++.|-++..-|+.+..+|.|.++ +..+.. +.....-...|.+++|+||+..|+..+.+++|.+-+-.
T Consensus 73 ~~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~f 151 (928)
T PF04762_consen 73 DPNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDF 151 (928)
T ss_pred CCCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccc
Confidence 346789999999999999999999999999 544332 22333445689999999999999999988888775311
Q ss_pred ---------C---C----------ccee------------------------eeecCCCCCeEEEEEecCCCeEEEEEc-
Q 044075 582 ---------K---P----------NFCL------------------------QTYTGHNNHVMSLDFHPKKNDLFCSCD- 614 (786)
Q Consensus 582 ---------s---~----------~~~~------------------------~~~~~h~~~V~sl~~sp~g~~ll~sgs- 614 (786)
. + ++.. ..+. +...-..|+|-.||.++.++.-
T Consensus 152 d~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~ 230 (928)
T PF04762_consen 152 DPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVE 230 (928)
T ss_pred eEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEE
Confidence 0 0 0000 0011 3335567899999988776653
Q ss_pred -C---CCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEEC---CCeEEEEEcCCCcEEEEEe----cCCCCEE
Q 044075 615 -G---NSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAAS---ENVVSIFDVETDRLTHSFK----GHSTEIH 680 (786)
Q Consensus 615 -~---Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~---dg~I~iwD~~t~~~i~~l~----~h~~~I~ 680 (786)
. -..|+||+-+ +......+ +-...++|.|.|+.+++.-. ...|.+|.-+ |-....|. .....|.
T Consensus 231 ~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErN-GLrhgeF~l~~~~~~~~v~ 308 (928)
T PF04762_consen 231 PETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERN-GLRHGEFTLRFDPEEEKVI 308 (928)
T ss_pred cCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecC-CcEeeeEecCCCCCCceee
Confidence 2 2579999977 44333322 33457899999998888776 2456666643 32222232 3456899
Q ss_pred EEEEcCCCCEEEEEeCCeEEEEECCCCee--EEEEccC-CCceEEEEEeCCCC-EEEEEECCCeEEEEE----CCCC---
Q 044075 681 SVCWDTNGEYLASVSQDSVRVWSLASGEC--IHELSSS-GNKFHSCIFHPSYP-TLMVIGGYQSLELWN----MAEN--- 749 (786)
Q Consensus 681 sv~~spdg~~Lasgs~D~I~vwDl~s~~~--i~~l~~~-~~~I~sv~fspdg~-~L~sgs~dg~I~IwD----l~~~--- 749 (786)
.+.|++|+.+|+....|.|.+|-..+..- -.++... ...+..+.|+|... .|.+.+.+|.+.+++ +..+
T Consensus 309 ~l~Wn~ds~iLAv~~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~ 388 (928)
T PF04762_consen 309 ELAWNSDSEILAVWLEDRVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGS 388 (928)
T ss_pred EEEECCCCCEEEEEecCCceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCC
Confidence 99999999999999988999999887642 2222222 23445589999765 366666656554433 2211
Q ss_pred ------eE-------E----------------EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 750 ------KC-------M----------------TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 750 ------~~-------~----------------~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.. + ........|.+++|++++..+++-..||.|.+|+
T Consensus 389 ~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~ 454 (928)
T PF04762_consen 389 SPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYE 454 (928)
T ss_pred CccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEE
Confidence 11 1 1112467899999999998899999999999884
No 273
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.05 E-value=6.1e-08 Score=109.52 Aligned_cols=192 Identities=8% Similarity=0.088 Sum_probs=132.5
Q ss_pred CeEEEEEcCCCCE-EEEEECC---CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEE-eCC--CcEEEEcCCCC
Q 044075 511 KVTCCHFSSDGKL-LASAGHD---KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATS-SFD--KTVRIWDAAKP 583 (786)
Q Consensus 511 ~V~~lafSpdg~~-Lasgs~D---g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasg-s~D--g~I~VWdl~s~ 583 (786)
.+....|+|||+. ++..+.+ ..|.++|+.+++...... ..+.+....|+|||+.|+.. +.+ ..|.++|+.++
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g 267 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK 267 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence 7889999999984 6654433 569999998877655443 45566778899999877654 333 46777788776
Q ss_pred cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC--cEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECC------
Q 044075 584 NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS--EIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASE------ 655 (786)
Q Consensus 584 ~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg--~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~d------ 655 (786)
. ...+..+........|+|+|+.++++.+..+ .|+++|+.+++..+..........|+|+|+.++.....
T Consensus 268 ~--~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~~~~~SPDG~~Ia~~~~~~~~~~~ 345 (419)
T PRK04043 268 T--LTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGKNNSSVSTYKNYIVYSSRETNNEFG 345 (419)
T ss_pred c--EEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCCcCceECCCCCEEEEEEcCCCcccC
Confidence 5 3344444443456689999999988876555 57888888877755544332345899999998887764
Q ss_pred ---CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCCC
Q 044075 656 ---NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLASG 707 (786)
Q Consensus 656 ---g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s~ 707 (786)
..|++.|+.++.... +... .......|+|||+.|+..+.. .+.++++...
T Consensus 346 ~~~~~I~v~d~~~g~~~~-LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~ 402 (419)
T PRK04043 346 KNTFNLYLISTNSDYIRR-LTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYN 402 (419)
T ss_pred CCCcEEEEEECCCCCeEE-CCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCCC
Confidence 368899998886433 3322 233358899999988776543 4667777544
No 274
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.04 E-value=8.1e-08 Score=107.36 Aligned_cols=252 Identities=14% Similarity=0.057 Sum_probs=160.8
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEE
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSL 600 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl 600 (786)
+..+++++.+|.|..+|..+++.+............+.. ++..+++++.++.|..+|..+++. +..... ...+.+.
T Consensus 65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~-~W~~~~-~~~~~~~ 140 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKE-LWRAKL-SSEVLSP 140 (377)
T ss_pred CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcE-eeeecc-CceeecC
Confidence 568888888999999999999988766544432223332 466788889999999999988874 332221 1222221
Q ss_pred EEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeE--------EEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEE
Q 044075 601 DFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTV--------QVRFQPRLGLLLAAASENVVSIFDVETDRLTHSF 672 (786)
Q Consensus 601 ~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~--------~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l 672 (786)
-.. .+..++ .++.++.|+.||.++++.+........ ...+ .+..++++..++.+..+|.++++.+...
T Consensus 141 p~v-~~~~v~-v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~ 216 (377)
T TIGR03300 141 PLV-ANGLVV-VRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQ 216 (377)
T ss_pred CEE-ECCEEE-EECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeeee
Confidence 111 234444 566799999999999887655442211 1111 1357788888899999999999877654
Q ss_pred ecCCC----C---EEEEEEcC--CCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEE
Q 044075 673 KGHST----E---IHSVCWDT--NGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLE 742 (786)
Q Consensus 673 ~~h~~----~---I~sv~~sp--dg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~ 742 (786)
..... . +..+.-+| .+..+++++.+ .++.||..+++.+...... ...... ..+..+++++.+|.|+
T Consensus 217 ~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~--~~~~p~--~~~~~vyv~~~~G~l~ 292 (377)
T TIGR03300 217 RVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDAS--SYQGPA--VDDNRLYVTDADGVVV 292 (377)
T ss_pred ccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccC--CccCce--EeCCEEEEECCCCeEE
Confidence 31100 0 00111011 24566666666 9999999999887766522 122222 2456788889999999
Q ss_pred EEECCCCeEEEEc-cc-CCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 743 LWNMAENKCMTIA-AH-DCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 743 IwDl~~~~~~~~~-~h-~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.+|..+++.+... .. ...+.+... .+..|++++.||.|.+||
T Consensus 293 ~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d 336 (377)
T TIGR03300 293 ALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLS 336 (377)
T ss_pred EEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEE
Confidence 9999998766322 21 112222222 366888899999998875
No 275
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.04 E-value=6.4e-08 Score=106.09 Aligned_cols=268 Identities=15% Similarity=0.244 Sum_probs=185.9
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeC-----------CCcEEEEcCC
Q 044075 513 TCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSF-----------DKTVRIWDAA 581 (786)
Q Consensus 513 ~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~-----------Dg~I~VWdl~ 581 (786)
+-+.|||.|.||+|--.-| |.+|--++...+..+. |. .|.-+.|||+.+||+|-+. ...|+|||+.
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~ 290 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA 290 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence 5689999999999986655 9999888877777774 44 4889999999999998653 2579999999
Q ss_pred CCcceeeeecC--CCCCeE-EEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee---cCCeEEEEEeCCCCEEEEEECC
Q 044075 582 KPNFCLQTYTG--HNNHVM-SLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS---KGGTVQVRFQPRLGLLLAAASE 655 (786)
Q Consensus 582 s~~~~~~~~~~--h~~~V~-sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~---~~~i~~i~~sp~g~~Ll~gs~d 655 (786)
++. ..+.+.. ....++ -+.|+.+++++.... ...|.||+..+...+... -.+|..+.|+|.+..|+.-...
T Consensus 291 tG~-lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~--~~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe 367 (698)
T KOG2314|consen 291 TGL-LKRSFPVIKSPYLKWPIFRWSHDDKYFARMT--GNSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPE 367 (698)
T ss_pred ccc-hhcceeccCCCccccceEEeccCCceeEEec--cceEEEEecCceeeecccccCCccccCcccCCCcceEEEEccc
Confidence 987 3454443 222233 357888877665333 468999998775544322 2677788999998877765542
Q ss_pred -----CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-----------eEEEEECCCCeeEEEEccCCCc
Q 044075 656 -----NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-----------SVRVWSLASGECIHELSSSGNK 719 (786)
Q Consensus 656 -----g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-----------~I~vwDl~s~~~i~~l~~~~~~ 719 (786)
..+.+..+.++..+++-.-|.-.=..+.|-.+|+||+.--+. .+-|+.++.....-....-...
T Consensus 368 ~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~ 447 (698)
T KOG2314|consen 368 TNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKES 447 (698)
T ss_pred ccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchh
Confidence 357788888887777666555555567788899999865322 3556666654432222234577
Q ss_pred eEEEEEeCCCCEEEEEECC---CeEEEEECCC-CeEEEE--cccCCCeEEEEEcCCCCEEEEEe---CCCcEEEeC
Q 044075 720 FHSCIFHPSYPTLMVIGGY---QSLELWNMAE-NKCMTI--AAHDCVISALAQSPVTGMVASAS---HDKSVKIWK 786 (786)
Q Consensus 720 I~sv~fspdg~~L~sgs~d---g~I~IwDl~~-~~~~~~--~~h~~~V~slafspdg~~LaSgs---~DG~I~IWd 786 (786)
|...+|.|.|..+++.+.. .++.+|.+.+ .....+ .-.....+.|.|+|.|.+++.+. ..|.+.++|
T Consensus 448 vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D 523 (698)
T KOG2314|consen 448 VIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYD 523 (698)
T ss_pred eeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEecccccceEEEe
Confidence 8899999999988887765 3788998874 222111 11235577899999999888764 356677665
No 276
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.04 E-value=1.3e-08 Score=103.97 Aligned_cols=236 Identities=11% Similarity=0.149 Sum_probs=162.4
Q ss_pred CCCeEEEEEcC---CCC-EEEEEECCCeEEEEEcCCCeeeeecCCCC------CCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 509 SSKVTCCHFSS---DGK-LLASAGHDKKVVVWNMENFQTECTPDDHN------HIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 509 ~~~V~~lafSp---dg~-~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~------~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
++.+..+.|.. +|. .|+-+..+|.|.++..........+.+-. ....++.|++.+..++++-.+|.+.+-
T Consensus 69 ts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v 148 (339)
T KOG0280|consen 69 TSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGV 148 (339)
T ss_pred ccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEE
Confidence 34566666654 455 46667778999999877554444443321 124578899989999999999999855
Q ss_pred cCCCCc-ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC-ee----eEeecCCeEEEEEeC-CCCEEEE
Q 044075 579 DAAKPN-FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY-SC----ARISKGGTVQVRFQP-RLGLLLA 651 (786)
Q Consensus 579 dl~s~~-~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~-~~----~~~~~~~i~~i~~sp-~g~~Ll~ 651 (786)
+..... ..+...+.|.-+++-..|+...+.++++|+.|+.+..||++.. +. .+.+..++.+|.-+| ...++++
T Consensus 149 ~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~T 228 (339)
T KOG0280|consen 149 YETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIAT 228 (339)
T ss_pred ecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEE
Confidence 543332 1234788999999999999988999999999999999999932 22 234556777877665 5678999
Q ss_pred EECCCeEEEEEcCC-CcEEEEEecCCCCEEEEEEcCC--CCEEEEEeCCeEEEEECCCC--e---eEEEEccCCCceEEE
Q 044075 652 AASENVVSIFDVET-DRLTHSFKGHSTEIHSVCWDTN--GEYLASVSQDSVRVWSLASG--E---CIHELSSSGNKFHSC 723 (786)
Q Consensus 652 gs~dg~I~iwD~~t-~~~i~~l~~h~~~I~sv~~spd--g~~Lasgs~D~I~vwDl~s~--~---~i~~l~~~~~~I~sv 723 (786)
|+.|..|++||.++ ++++..-. -.+.|..++++|. +.+|++|-.+.++|.+...+ + .....+.|.+-+..-
T Consensus 229 GsYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~ 307 (339)
T KOG0280|consen 229 GSYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEFQIVLPSDKIHDSLCYGG 307 (339)
T ss_pred eccccceeeeehhcccCccccCc-cccceEEEEecchhhhHHHHHHHhcCceEEEecccccchheeeeccccccceeecc
Confidence 99999999999994 56665544 4578999999995 34566666666777776653 2 333444555555555
Q ss_pred EEeCCCCEEEEEE-CCCeEE-EEE
Q 044075 724 IFHPSYPTLMVIG-GYQSLE-LWN 745 (786)
Q Consensus 724 ~fspdg~~L~sgs-~dg~I~-IwD 745 (786)
.|......|++++ .|+.|+ +|-
T Consensus 308 DWd~~~~~lATCsFYDk~~~~~Wl 331 (339)
T KOG0280|consen 308 DWDSKDSFLATCSFYDKKIRQLWL 331 (339)
T ss_pred ccccccceeeeeeccccceeeeee
Confidence 5644445566665 344434 554
No 277
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.02 E-value=2.6e-07 Score=99.73 Aligned_cols=172 Identities=13% Similarity=0.200 Sum_probs=134.4
Q ss_pred EcC-CCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCC-cEEEEcCCCCcceeeeecCCC
Q 044075 517 FSS-DGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDK-TVRIWDAAKPNFCLQTYTGHN 594 (786)
Q Consensus 517 fSp-dg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg-~I~VWdl~s~~~~~~~~~~h~ 594 (786)
|++ +|.+++..+ -|.+.|.+...+-.+.. +|...|.-..+..+++-++.|..|| .|-|+|.++++ +..+...-
T Consensus 327 fa~~~Gd~ia~VS-RGkaFi~~~~~~~~iqv--~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e--~kr~e~~l 401 (668)
T COG4946 327 FAVVNGDYIALVS-RGKAFIMRPWDGYSIQV--GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE--VKRIEKDL 401 (668)
T ss_pred hccCCCcEEEEEe-cCcEEEECCCCCeeEEc--CCCCceEEEEEccCCcceEEeccCCceEEEEecCCce--EEEeeCCc
Confidence 444 688888886 57777777655544433 5677799999988888999999999 89999999876 56666667
Q ss_pred CCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCC----eEEEEEcCCCc
Q 044075 595 NHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASEN----VVSIFDVETDR 667 (786)
Q Consensus 595 ~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg----~I~iwD~~t~~ 667 (786)
+.|.++..+++|+.++ .+.....|.+.|++++....+-+ +-++.+.|+|++++++.+.-+| .|++||+..++
T Consensus 402 g~I~av~vs~dGK~~v-vaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~K 480 (668)
T COG4946 402 GNIEAVKVSPDGKKVV-VANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGK 480 (668)
T ss_pred cceEEEEEcCCCcEEE-EEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCe
Confidence 8899999999998776 56667889999999988765544 6789999999999999988776 58999999887
Q ss_pred EEEEEecCCCCEEEEEEcCCCCEEEEEe
Q 044075 668 LTHSFKGHSTEIHSVCWDTNGEYLASVS 695 (786)
Q Consensus 668 ~i~~l~~h~~~I~sv~~spdg~~Lasgs 695 (786)
...... ....=.+-+|+|++++|..-+
T Consensus 481 iy~vTT-~ta~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 481 IYDVTT-PTAYDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred EEEecC-CcccccCcccCCCCcEEEEEe
Confidence 665443 333345668999999887655
No 278
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.02 E-value=7.2e-09 Score=107.80 Aligned_cols=242 Identities=13% Similarity=0.229 Sum_probs=172.5
Q ss_pred CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC-CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcE
Q 044075 541 FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK-PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEI 619 (786)
Q Consensus 541 ~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s-~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I 619 (786)
...+..+++|.+.|++...-|...-+++.+.|.++|||--++ +++-.........+++++.+.++...|+ .+-.+|++
T Consensus 14 p~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~-vg~~ngtv 92 (404)
T KOG1409|consen 14 PELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLY-VGQDNGTV 92 (404)
T ss_pred hhhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEE-EEEecceE
Confidence 344567789999999999999888899999999999995443 3332333334567899999998766555 77778999
Q ss_pred EEEeCCC----CeeeE---eecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEE
Q 044075 620 RFWNLSQ----YSCAR---ISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLA 692 (786)
Q Consensus 620 ~iwDl~~----~~~~~---~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~La 692 (786)
.-+.+.. ....+ .+...+..+.|+....++++.+.|..+.---.+.+..+..+.- ...-+++.+.-. +..
T Consensus 93 tefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~-~~~~t~~~~d~~--~~f 169 (404)
T KOG1409|consen 93 TEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNF-ETPASALQFDAL--YAF 169 (404)
T ss_pred EEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEe-eccCCCCceeeE--EEE
Confidence 8886643 22222 2235677788888888899999888776655555543322210 001111111111 333
Q ss_pred EEeCC-eEEE--EECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe--EEEEcccCCCeEEEEEc
Q 044075 693 SVSQD-SVRV--WSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK--CMTIAAHDCVISALAQS 767 (786)
Q Consensus 693 sgs~D-~I~v--wDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~--~~~~~~h~~~V~slafs 767 (786)
.|... .|.+ .+...-..+.++.+|.+.+.++.|.+....|+++..|..|.+||+..++ ...+.+|...|..+...
T Consensus 170 vGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~ 249 (404)
T KOG1409|consen 170 VGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYA 249 (404)
T ss_pred ecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhh
Confidence 33332 3333 3334456788999999999999999999999999999999999997654 44778999999999998
Q ss_pred CCCCEEEEEeCCCcEEEeC
Q 044075 768 PVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 768 pdg~~LaSgs~DG~I~IWd 786 (786)
+.-..|++++.||.|.+|+
T Consensus 250 ~~t~~l~S~~edg~i~~w~ 268 (404)
T KOG1409|consen 250 QHTRQLISCGEDGGIVVWN 268 (404)
T ss_pred hhheeeeeccCCCeEEEEe
Confidence 8889999999999999996
No 279
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=98.97 E-value=1.7e-08 Score=103.19 Aligned_cols=209 Identities=21% Similarity=0.235 Sum_probs=148.8
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee--ecCCCCCCeEEEEEcc-CCCEEEEEeCCCcE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC--TPDDHNHIITDVRFRP-NSTQLATSSFDKTV 575 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~--~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I 575 (786)
++++...+-......++.|++-+.-++++..+|.+.+-+........ ..+.|...++...|+. +.+++++|+.|+.+
T Consensus 111 L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l 190 (339)
T KOG0280|consen 111 LRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSL 190 (339)
T ss_pred ecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceE
Confidence 33443333333346788999999999999999999976665544444 7899999999999987 45688999999999
Q ss_pred EEEcCCCCcceee-eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC-CeeeEe--ecCCeEEEEEeCCCC-EEE
Q 044075 576 RIWDAAKPNFCLQ-TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ-YSCARI--SKGGTVQVRFQPRLG-LLL 650 (786)
Q Consensus 576 ~VWdl~s~~~~~~-~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~-~~~~~~--~~~~i~~i~~sp~g~-~Ll 650 (786)
..||++.++..+. ...-|...|.+|.-+|.....+++|+.|-.|++||.++ ++.+.. ..+++..++++|... .++
T Consensus 191 ~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL 270 (339)
T KOG0280|consen 191 SCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLL 270 (339)
T ss_pred EEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecchhhhHHH
Confidence 9999995543333 35678899999999998888999999999999999984 444433 338899999988643 344
Q ss_pred EEECCCeEEEEEcCCC--c---EEEEEecCCCCEEEEEEcCCCCEEEEEeC-C-eEE-EEECCCC
Q 044075 651 AAASENVVSIFDVETD--R---LTHSFKGHSTEIHSVCWDTNGEYLASVSQ-D-SVR-VWSLASG 707 (786)
Q Consensus 651 ~gs~dg~I~iwD~~t~--~---~i~~l~~h~~~I~sv~~spdg~~Lasgs~-D-~I~-vwDl~s~ 707 (786)
+++--+-.+|.+.... + .....+.|.+-+..-.|.....+|++|+- | .++ +|-.-++
T Consensus 271 ~~CMh~G~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~ 335 (339)
T KOG0280|consen 271 AACMHNGAKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITG 335 (339)
T ss_pred HHHHhcCceEEEecccccchheeeeccccccceeeccccccccceeeeeeccccceeeeeeeccC
Confidence 4444455566666544 2 33444557766666677555567888763 3 434 6654433
No 280
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=98.96 E-value=3.2e-08 Score=115.73 Aligned_cols=191 Identities=12% Similarity=0.199 Sum_probs=149.9
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCC----eEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHI----ITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC 586 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~----V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~ 586 (786)
.|....+.-+.+.++.++.+..+.|||.........+...... ..-+-++++.-++++|+.-+.|.+|+....+.
T Consensus 89 wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~- 167 (967)
T KOG0974|consen 89 WIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNK- 167 (967)
T ss_pred cccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCC-
Confidence 3444556667788999999999999999887766666433321 11233455667899999999999999984443
Q ss_pred eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE----eecCCeEEEEEeCCCCEEEEEECCCeEEEEE
Q 044075 587 LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR----ISKGGTVQVRFQPRLGLLLAAASENVVSIFD 662 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~----~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD 662 (786)
...+.+|.+.|.++.|+.+|.+++ +++.|.++++|++++.+... -+...+..++|.|. .+++++.|.+.++|+
T Consensus 168 p~~l~GHeG~iF~i~~s~dg~~i~-s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~ 244 (967)
T KOG0974|consen 168 PIRLKGHEGSIFSIVTSLDGRYIA-SVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWG 244 (967)
T ss_pred cceecccCCceEEEEEccCCcEEE-EEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEe
Confidence 336889999999999998887655 99999999999999887665 24467788999998 999999999999997
Q ss_pred cCCCcEEEEEecCC-CCEEEEEEcCCCCEEEEEeCC-eEEEEECCC
Q 044075 663 VETDRLTHSFKGHS-TEIHSVCWDTNGEYLASVSQD-SVRVWSLAS 706 (786)
Q Consensus 663 ~~t~~~i~~l~~h~-~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s 706 (786)
.+... +..+.+|. ..|..+...++...+++++.| .+++||+..
T Consensus 245 ~~~~~-l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 245 VNGTQ-LEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred cccce-ehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 76443 33666664 568999999999999999999 999999864
No 281
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=98.94 E-value=6.1e-08 Score=108.55 Aligned_cols=230 Identities=12% Similarity=0.193 Sum_probs=165.4
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec--CCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP--DDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l--~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
.--.++.||...|.-+.|+.....|-+...+|.|.||-+-.+.-.... ....+.|.+++|+.||..++..-.||.|.|
T Consensus 62 smNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIV 141 (1189)
T KOG2041|consen 62 SMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIV 141 (1189)
T ss_pred chhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEE
Confidence 344588999999999999999999999999999999998776544333 334567999999999999999999999988
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC-------eeeEe-------ecCCeEEEEEe
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY-------SCARI-------SKGGTVQVRFQ 643 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~-------~~~~~-------~~~~i~~i~~s 643 (786)
=.++....--+.+++ .....+.|++|...++ .+-.+|.+.+||-... .+... +...+..++|.
T Consensus 142 GsvdGNRIwgKeLkg--~~l~hv~ws~D~~~~L-f~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~ 218 (1189)
T KOG2041|consen 142 GSVDGNRIWGKELKG--QLLAHVLWSEDLEQAL-FKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWN 218 (1189)
T ss_pred Eeeccceecchhcch--heccceeecccHHHHH-hhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeec
Confidence 777655422223332 2245788999877665 5667899999997532 11111 11223445543
Q ss_pred --------CCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----------eEEEEECC
Q 044075 644 --------PRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----------SVRVWSLA 705 (786)
Q Consensus 644 --------p~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----------~I~vwDl~ 705 (786)
|+...|+++...|.+.|..-++......+. ..-.|..+.|+++|.+|++|+.+ .|.+| ..
T Consensus 219 ~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~d-tgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fy-sp 296 (1189)
T KOG2041|consen 219 TGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVD-TGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFY-SP 296 (1189)
T ss_pred cCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEe-cccEeecceecCCCcEEEEccCcccccCccccceEEEe-cc
Confidence 577789999999999887766543222233 33678899999999999999854 13333 34
Q ss_pred CCeeEEEEccCCCceEEEEEeCCCCEEEE
Q 044075 706 SGECIHELSSSGNKFHSCIFHPSYPTLMV 734 (786)
Q Consensus 706 s~~~i~~l~~~~~~I~sv~fspdg~~L~s 734 (786)
-|+.+.+++..+..|++++|-..|-.++.
T Consensus 297 ~G~i~gtlkvpg~~It~lsWEg~gLriA~ 325 (1189)
T KOG2041|consen 297 YGHIVGTLKVPGSCITGLSWEGTGLRIAI 325 (1189)
T ss_pred chhheEEEecCCceeeeeEEcCCceEEEE
Confidence 57788899989999999999776654443
No 282
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=98.93 E-value=5.9e-09 Score=126.44 Aligned_cols=196 Identities=19% Similarity=0.374 Sum_probs=159.4
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC-CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD-DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~-~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s 582 (786)
.++.|-..|.|+.=+|...+.+||+.||.|++|....+..+..+. .-...|+.+.|+..|+.+..+..||.+.+|.+..
T Consensus 2203 ~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p 2282 (2439)
T KOG1064|consen 2203 MIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASP 2282 (2439)
T ss_pred EeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCC
Confidence 345567789999999988999999999999999998888777663 2337899999999999999999999999999872
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEc---CCCcEEEEeCCCC---eee-EeecCCeEEEEEeCCCCEEEEEECC
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCD---GNSEIRFWNLSQY---SCA-RISKGGTVQVRFQPRLGLLLAAASE 655 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs---~Dg~I~iwDl~~~---~~~-~~~~~~i~~i~~sp~g~~Ll~gs~d 655 (786)
.+......|.....++.|.. .++++.+ .++.+.+||.-.. .++ ..+.++.+++++.|....|++|+.+
T Consensus 2283 --k~~~s~qchnk~~~Df~Fi~---s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~ 2357 (2439)
T KOG1064|consen 2283 --KPYTSWQCHNKALSDFRFIG---SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRK 2357 (2439)
T ss_pred --cceeccccCCccccceeeee---hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCc
Confidence 35677788988889998874 3444543 5789999996532 222 3455889999999999999999999
Q ss_pred CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEc
Q 044075 656 NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELS 714 (786)
Q Consensus 656 g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~ 714 (786)
|.|++||++..++++.+.. ++ ...+|++++.. .|+||++.....++++.
T Consensus 2358 G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2358 GEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred CcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchhhcCc
Confidence 9999999998888877764 44 66788888877 99999999877776654
No 283
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.93 E-value=3.2e-06 Score=88.68 Aligned_cols=215 Identities=17% Similarity=0.223 Sum_probs=144.5
Q ss_pred EEEEcC-CCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEc-cCCCEEEEEeCCCcEEEEcCCCCcceee-ee
Q 044075 514 CCHFSS-DGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFR-PNSTQLATSSFDKTVRIWDAAKPNFCLQ-TY 590 (786)
Q Consensus 514 ~lafSp-dg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fs-pdg~~Lasgs~Dg~I~VWdl~s~~~~~~-~~ 590 (786)
+++|.+ ++.++++-...+.|..|+..+++...... .. ...+++. +++ .|+++..+ .+.++|+.+++.... ..
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~-~~--~~G~~~~~~~g-~l~v~~~~-~~~~~d~~~g~~~~~~~~ 78 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDL-PG--PNGMAFDRPDG-RLYVADSG-GIAVVDPDTGKVTVLADL 78 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEES-SS--EEEEEEECTTS-EEEEEETT-CEEEEETTTTEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEec-CC--CceEEEEccCC-EEEEEEcC-ceEEEecCCCcEEEEeec
Confidence 678888 67777777678999999998876644222 22 6677777 564 55556654 456669887653221 11
Q ss_pred --cC-CCCCeEEEEEecCCCeEEEEEcCC--------CcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEE-CCC
Q 044075 591 --TG-HNNHVMSLDFHPKKNDLFCSCDGN--------SEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAA-SEN 656 (786)
Q Consensus 591 --~~-h~~~V~sl~~sp~g~~ll~sgs~D--------g~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs-~dg 656 (786)
.. .....+.+++.|+|+ ++++.... |.|..++.. ++...... .....++|+|+++.|+++. ..+
T Consensus 79 ~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~ 156 (246)
T PF08450_consen 79 PDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNG 156 (246)
T ss_dssp ETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTT
T ss_pred cCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccccc
Confidence 11 345688999999988 44454432 568888887 44433333 5567899999999887655 468
Q ss_pred eEEEEEcCCCc--E--EEEE---ecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEe-C
Q 044075 657 VVSIFDVETDR--L--THSF---KGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFH-P 727 (786)
Q Consensus 657 ~I~iwD~~t~~--~--i~~l---~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fs-p 727 (786)
.|..|++.... . ...+ .......-.++++.+|+++++.... .|.++|.+ ++.+..+......+++|+|. +
T Consensus 157 ~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~ 235 (246)
T PF08450_consen 157 RIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGP 235 (246)
T ss_dssp EEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEEST
T ss_pred eeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECC
Confidence 89999986332 1 1222 2222347889999999988877666 99999988 88888888776789999994 6
Q ss_pred CCCEEEEEE
Q 044075 728 SYPTLMVIG 736 (786)
Q Consensus 728 dg~~L~sgs 736 (786)
+.+.|++.+
T Consensus 236 ~~~~L~vTt 244 (246)
T PF08450_consen 236 DGKTLYVTT 244 (246)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEe
Confidence 767777655
No 284
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.91 E-value=4.4e-07 Score=102.92 Aligned_cols=289 Identities=16% Similarity=0.184 Sum_probs=194.1
Q ss_pred ceeeeeEEeecCCCCeEEEEEcCC------C------CEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEcc---
Q 044075 497 FSFNEVSSIRKSSSKVTCCHFSSD------G------KLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRP--- 561 (786)
Q Consensus 497 ~~~~~v~~l~~H~~~V~~lafSpd------g------~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fsp--- 561 (786)
.++..+.++..|...|+.+.|.|- + -+||++...|.|.|||...+..+..+..|.++|.+++|-+
T Consensus 43 ~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd 122 (1062)
T KOG1912|consen 43 RSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARD 122 (1062)
T ss_pred hhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccC
Confidence 356677888899999999999872 1 2578888899999999999999999999999999999987
Q ss_pred CC-CEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeC----------------
Q 044075 562 NS-TQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNL---------------- 624 (786)
Q Consensus 562 dg-~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl---------------- 624 (786)
+. ..|++-....+|.+|+..+++. ...+........|+.+.|-+..-|+.-+..|.+.+-+.
T Consensus 123 ~Srd~LlaIh~ss~lvLwntdtG~k-~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~ 201 (1062)
T KOG1912|consen 123 DSRDVLLAIHGSSTLVLWNTDTGEK-FWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQIT 201 (1062)
T ss_pred cchheeEEecCCcEEEEEEccCCce-eeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEe
Confidence 33 3566666678999999998874 33333333455667776655444433333444444332
Q ss_pred ----------------------------------------------------------CCCeeeEee---cCCeEEEEEe
Q 044075 625 ----------------------------------------------------------SQYSCARIS---KGGTVQVRFQ 643 (786)
Q Consensus 625 ----------------------------------------------------------~~~~~~~~~---~~~i~~i~~s 643 (786)
+-..++... .+...-+.+-
T Consensus 202 sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vl 281 (1062)
T KOG1912|consen 202 SDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVL 281 (1062)
T ss_pred cCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEec
Confidence 211111111 1222234454
Q ss_pred CCC--CEEEEEECCCeEEEEEcCC----------------CcEEEEE---e-----------------------------
Q 044075 644 PRL--GLLLAAASENVVSIFDVET----------------DRLTHSF---K----------------------------- 673 (786)
Q Consensus 644 p~g--~~Ll~gs~dg~I~iwD~~t----------------~~~i~~l---~----------------------------- 673 (786)
|+. ..|++...||.+.+|-.+. ++.++.+ +
T Consensus 282 P~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w 361 (1062)
T KOG1912|consen 282 PDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFW 361 (1062)
T ss_pred cCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHH
Confidence 544 4688888899888885543 1111100 0
Q ss_pred -------------------------------------------cCCCCEEEEEEcC-----------CC-------CEEE
Q 044075 674 -------------------------------------------GHSTEIHSVCWDT-----------NG-------EYLA 692 (786)
Q Consensus 674 -------------------------------------------~h~~~I~sv~~sp-----------dg-------~~La 692 (786)
+|....++....| .+ .+++
T Consensus 362 ~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvA 441 (1062)
T KOG1912|consen 362 QLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVA 441 (1062)
T ss_pred hhhcCCcCcccccccccccccccccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEE
Confidence 0111122221111 11 1466
Q ss_pred EEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEEC---------CCeEEEEECCCCeEEEEc----ccC
Q 044075 693 SVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGG---------YQSLELWNMAENKCMTIA----AHD 758 (786)
Q Consensus 693 sgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~---------dg~I~IwDl~~~~~~~~~----~h~ 758 (786)
.|... +|.|+|+.++.....+..|...|.++.|-....++-.+.. -+.+.|-|+++|....+. ...
T Consensus 442 vGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~de 521 (1062)
T KOG1912|consen 442 VGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDE 521 (1062)
T ss_pred eecCCceEEEEEecchhhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCc
Confidence 67776 9999999999988899999999999999877654433321 246778899999877555 356
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 759 CVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 759 ~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.+|..+..+..+.||+..-.|.-+.|||
T Consensus 522 spI~~irvS~~~~yLai~Fr~~plEiwd 549 (1062)
T KOG1912|consen 522 SPIRAIRVSSSGRYLAILFRREPLEIWD 549 (1062)
T ss_pred CcceeeeecccCceEEEEecccchHHHh
Confidence 7899999999999999999999998886
No 285
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.91 E-value=1e-09 Score=124.78 Aligned_cols=262 Identities=16% Similarity=0.219 Sum_probs=186.5
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCC--cE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDK--TV 575 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg--~I 575 (786)
.|+..++++.|+...+|++|+-+.++|++|+..|.|++|++.+|........|.++|+.|.=+.+|..+++.+.-. -.
T Consensus 1090 RFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Pls 1169 (1516)
T KOG1832|consen 1090 RFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLS 1169 (1516)
T ss_pred hcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchH
Confidence 4677888999999999999999999999999999999999999999999999999999999999998877765433 47
Q ss_pred EEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe-ec------CCeEEEEEeCCCCE
Q 044075 576 RIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI-SK------GGTVQVRFQPRLGL 648 (786)
Q Consensus 576 ~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~-~~------~~i~~i~~sp~g~~ 648 (786)
.+|++.+-....+.+. .-.++.|+.....-+ .|.......+||+.+...+.. +. ....+..|+|+...
T Consensus 1170 aLW~~~s~~~~~Hsf~----ed~~vkFsn~~q~r~-~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~L 1244 (1516)
T KOG1832|consen 1170 ALWDASSTGGPRHSFD----EDKAVKFSNSLQFRA-LGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTL 1244 (1516)
T ss_pred HHhccccccCcccccc----ccceeehhhhHHHHH-hcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcce
Confidence 8999876444444444 346778875433333 333346789999998776544 22 22356789999877
Q ss_pred EEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCC
Q 044075 649 LLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPS 728 (786)
Q Consensus 649 Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspd 728 (786)
++- || .+||++..+.++.|......+ .=.|+|+|.-++..+ .|||+++.+.++....- .-..+.|...
T Consensus 1245 Iln---dG--vLWDvR~~~aIh~FD~ft~~~-~G~FHP~g~eVIINS----EIwD~RTF~lLh~VP~L--dqc~VtFNst 1312 (1516)
T KOG1832|consen 1245 ILN---DG--VLWDVRIPEAIHRFDQFTDYG-GGGFHPSGNEVIINS----EIWDMRTFKLLHSVPSL--DQCAVTFNST 1312 (1516)
T ss_pred Eee---Cc--eeeeeccHHHHhhhhhheecc-cccccCCCceEEeec----hhhhhHHHHHHhcCccc--cceEEEeccC
Confidence 653 33 589999988888777544222 336899999888776 58999998877665332 2345667777
Q ss_pred CCEEEEEEC------C-----------CeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEE
Q 044075 729 YPTLMVIGG------Y-----------QSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 729 g~~L~sgs~------d-----------g~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSg 776 (786)
|..++..-. | ...+-||..+.+.+........|.+++-.|...+|..-
T Consensus 1313 G~VmYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v~R~~~Dlct~~~D~~l~vI 1377 (1516)
T KOG1832|consen 1313 GDVMYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPVDRCLLDLCTEPTDSFLGVI 1377 (1516)
T ss_pred ccchhhhhhhhhhhhhhcccccccchhhhhccccccccccceeeecccchhhhhcCCccceEEEE
Confidence 765444320 0 13445555555555555556677777777777766553
No 286
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.91 E-value=1.7e-07 Score=94.78 Aligned_cols=243 Identities=10% Similarity=0.009 Sum_probs=163.8
Q ss_pred CCeEEEEEcCCCe--eeeecCCCCCCeEEEEEcc-----CCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEE
Q 044075 530 DKKVVVWNMENFQ--TECTPDDHNHIITDVRFRP-----NSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDF 602 (786)
Q Consensus 530 Dg~V~IWdl~t~~--~~~~l~~h~~~V~sl~fsp-----dg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~ 602 (786)
...|-+|++.+.. .+..+ +.+.|.| ...+|+.|+..|...+|...+.+........|...|+-+.-
T Consensus 51 t~sv~i~~~y~N~~~iv~~y-------~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r 123 (344)
T KOG4532|consen 51 TISVPINSHYSNPKGIVEFY-------TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKR 123 (344)
T ss_pred eeeeEeccccCCchhhEEee-------ecccccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhhhhh
Confidence 4457777776433 23333 3344544 34589999999999999998777555555555554433222
Q ss_pred ecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC--cEEE-EEecCC
Q 044075 603 HPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETD--RLTH-SFKGHS 676 (786)
Q Consensus 603 sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~--~~i~-~l~~h~ 676 (786)
.-+...-+..++.|.++++.+++......... -...++.++++++++++.+....|..|.+... ..+. ......
T Consensus 124 ~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~ 203 (344)
T KOG4532|consen 124 YCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTS 203 (344)
T ss_pred hcccccceeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccC
Confidence 22223334467888888888887544333222 33678899999999999999999999988765 2233 222344
Q ss_pred CCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeE-----EEEccCCCceEEEEEeCCCC--EEEEEECCCeEEEEECCC
Q 044075 677 TEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECI-----HELSSSGNKFHSCIFHPSYP--TLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 677 ~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i-----~~l~~~~~~I~sv~fspdg~--~L~sgs~dg~I~IwDl~~ 748 (786)
..-.+..|+.....+|++..| ++.|||++..... .+-..|.+.+..|.|++.|. .|+..-.-+.+.+.|+++
T Consensus 204 D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~ 283 (344)
T KOG4532|consen 204 DHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRN 283 (344)
T ss_pred CCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEccc
Confidence 556788999999999999999 9999999975322 22235788999999998664 455555567899999998
Q ss_pred CeEEE--------EcccCC-CeEEEEEcCCCCEEEEEeCC
Q 044075 749 NKCMT--------IAAHDC-VISALAQSPVTGMVASASHD 779 (786)
Q Consensus 749 ~~~~~--------~~~h~~-~V~slafspdg~~LaSgs~D 779 (786)
++-.. ...|.. .|..-.|+.++..+.+.+++
T Consensus 284 ~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~ 323 (344)
T KOG4532|consen 284 YVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNEL 323 (344)
T ss_pred CceeeEEecCccccccccccccccccccCCCcccccccch
Confidence 76431 223333 37778888877766655544
No 287
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=98.88 E-value=8.4e-09 Score=125.17 Aligned_cols=218 Identities=16% Similarity=0.243 Sum_probs=157.1
Q ss_pred CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC
Q 044075 548 DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY 627 (786)
Q Consensus 548 ~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~ 627 (786)
+.+-..|.++.-+|...+.+||+.||.|++|....+..++..-......|+.+.|+..|+.+- .++.||.|.+|.+...
T Consensus 2205 k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~-i~d~dg~l~l~q~~pk 2283 (2439)
T KOG1064|consen 2205 KHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFG-IVDGDGDLSLWQASPK 2283 (2439)
T ss_pred ecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCcee-eeccCCceeecccCCc
Confidence 345567888888998999999999999999999887755554444458899999999888665 6777999999998832
Q ss_pred eee--EeecCCeEEEEEeCCCCEEEEEEC---CCeEEEEEcCCC---cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-e
Q 044075 628 SCA--RISKGGTVQVRFQPRLGLLLAAAS---ENVVSIFDVETD---RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-S 698 (786)
Q Consensus 628 ~~~--~~~~~~i~~i~~sp~g~~Ll~gs~---dg~I~iwD~~t~---~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~ 698 (786)
-.. +.+......+.|-. ..+++++. ++.+.+||.... .++. ..|.+.++++++.|...+|++|+.+ .
T Consensus 2284 ~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~ 2359 (2439)
T KOG1064|consen 2284 PYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGE 2359 (2439)
T ss_pred ceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCcCc
Confidence 221 11223344455544 34444443 578999997543 3444 6699999999999999999999999 9
Q ss_pred EEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEc----ccCCCe----EEEEEcCCC
Q 044075 699 VRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIA----AHDCVI----SALAQSPVT 770 (786)
Q Consensus 699 I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~----~h~~~V----~slafspdg 770 (786)
|++||++..+.++++.. ++ ...++++++..|.|+||++..-..+... .|.+-. .-+... ..
T Consensus 2360 v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ak~gfFr~~g~Q~~v~-~~ 2428 (2439)
T KOG1064|consen 2360 VCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEHAKQGFFRNIGMQINVG-QC 2428 (2439)
T ss_pred EEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchhhcCchhhcccchhhhcCceeeec-cC
Confidence 99999999888777754 44 5568999999999999999886554222 111110 112222 24
Q ss_pred CEEEEEeCCCc
Q 044075 771 GMVASASHDKS 781 (786)
Q Consensus 771 ~~LaSgs~DG~ 781 (786)
+.|++|+.||+
T Consensus 2429 nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2429 NRIFSCGADGT 2439 (2439)
T ss_pred ceEEEecCCCC
Confidence 57888888874
No 288
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.87 E-value=6.3e-09 Score=113.12 Aligned_cols=203 Identities=19% Similarity=0.322 Sum_probs=148.9
Q ss_pred eeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc------ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC
Q 044075 544 ECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN------FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS 617 (786)
Q Consensus 544 ~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~------~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg 617 (786)
+..+.+|...|..++-..+.+-+++++.|++|++|.++... .+..++..|+.+|.++.|..+-.+++ +| ||
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~-Sc--D~ 804 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIA-SC--DG 804 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceee-ec--cC
Confidence 45678999999999888888899999999999999987532 24567889999999999997755443 44 89
Q ss_pred cEEEEeCCCCeeeEee-----cCCeEEEEEeC--CCCEEEEE-ECCCeEEEEEcCCCcEEEEEec-----CCCCEEEEEE
Q 044075 618 EIRFWNLSQYSCARIS-----KGGTVQVRFQP--RLGLLLAA-ASENVVSIFDVETDRLTHSFKG-----HSTEIHSVCW 684 (786)
Q Consensus 618 ~I~iwDl~~~~~~~~~-----~~~i~~i~~sp--~g~~Ll~g-s~dg~I~iwD~~t~~~i~~l~~-----h~~~I~sv~~ 684 (786)
.|.+||.-.+..+... .+....+..-+ +...++++ +.+.+|+++|.+..+.+..++. ....+.+++.
T Consensus 805 giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaV 884 (1034)
T KOG4190|consen 805 GIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAV 884 (1034)
T ss_pred cceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEe
Confidence 9999997665544311 12223333222 34455555 5579999999999876666553 3466889999
Q ss_pred cCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEE-EECCCCe
Q 044075 685 DTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLEL-WNMAENK 750 (786)
Q Consensus 685 spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~I-wDl~~~~ 750 (786)
.+.|++++++-.+ +|.+.|.++|+.+..+...+.....++ .|....++....|.++.+ |...++.
T Consensus 885 a~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldgi 951 (1034)
T KOG4190|consen 885 ADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDGI 951 (1034)
T ss_pred ccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCCe
Confidence 9999999988666 999999999999888766554444443 245556777777888888 8665554
No 289
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.82 E-value=1.1e-05 Score=84.56 Aligned_cols=214 Identities=9% Similarity=0.058 Sum_probs=139.5
Q ss_pred EEEEEcc-CCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee
Q 044075 555 TDVRFRP-NSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS 633 (786)
Q Consensus 555 ~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~ 633 (786)
.+++|.+ ++.++++-...+.|..|+..++......+. . ...+.+...+..++ .+.. +.+.++|+.+++.....
T Consensus 3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~--~--~~G~~~~~~~g~l~-v~~~-~~~~~~d~~~g~~~~~~ 76 (246)
T PF08450_consen 3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDLP--G--PNGMAFDRPDGRLY-VADS-GGIAVVDPDTGKVTVLA 76 (246)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEESS--S--EEEEEEECTTSEEE-EEET-TCEEEEETTTTEEEEEE
T ss_pred cceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEecC--C--CceEEEEccCCEEE-EEEc-CceEEEecCCCcEEEEe
Confidence 3678998 666666666789999999988763222222 2 67778873335555 3443 45566699887654433
Q ss_pred c--------CCeEEEEEeCCCCEEEEEECC--------CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC
Q 044075 634 K--------GGTVQVRFQPRLGLLLAAASE--------NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD 697 (786)
Q Consensus 634 ~--------~~i~~i~~sp~g~~Ll~gs~d--------g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D 697 (786)
. .....+++.++|+.+++.... |.|+.++.. ++...... .-...+.|+|+|+++.|+++...
T Consensus 77 ~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~-~~~~pNGi~~s~dg~~lyv~ds~ 154 (246)
T PF08450_consen 77 DLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD-GLGFPNGIAFSPDGKTLYVADSF 154 (246)
T ss_dssp EEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE-EESSEEEEEEETTSSEEEEEETT
T ss_pred eccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec-CcccccceEECCcchheeecccc
Confidence 2 234678999999966666543 568888887 54433333 34567899999999988765544
Q ss_pred --eEEEEECCCC-e------eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEc
Q 044075 698 --SVRVWSLASG-E------CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQS 767 (786)
Q Consensus 698 --~I~vwDl~s~-~------~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafs 767 (786)
.|..|++... . .+..+....+..-.+++..+|+..++....+.|.++|.. ++.+ .+......+++++|.
T Consensus 155 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fg 233 (246)
T PF08450_consen 155 NGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFG 233 (246)
T ss_dssp TTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEE
T ss_pred cceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEE
Confidence 8999988632 1 122222223347889999999988888888999999998 5554 344334689999994
Q ss_pred -CCCCEEEEEe
Q 044075 768 -PVTGMVASAS 777 (786)
Q Consensus 768 -pdg~~LaSgs 777 (786)
++.+.|+..+
T Consensus 234 g~~~~~L~vTt 244 (246)
T PF08450_consen 234 GPDGKTLYVTT 244 (246)
T ss_dssp STTSSEEEEEE
T ss_pred CCCCCEEEEEe
Confidence 6666555443
No 290
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.81 E-value=2.9e-06 Score=87.99 Aligned_cols=213 Identities=14% Similarity=0.036 Sum_probs=138.6
Q ss_pred CCeEEEEEcCCCeeeeecCCC--CCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCC
Q 044075 530 DKKVVVWNMENFQTECTPDDH--NHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKN 607 (786)
Q Consensus 530 Dg~V~IWdl~t~~~~~~l~~h--~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~ 607 (786)
+|.|..||..+++.+.....- .....+. ..+++..+++++.++.|..||..+++. +..+.. ...+...... .+.
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~-~W~~~~-~~~~~~~~~~-~~~ 77 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKV-LWRFDL-PGPISGAPVV-DGG 77 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEE-EEEEEC-SSCGGSGEEE-ETT
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCE-EEEeec-cccccceeee-ccc
Confidence 789999999999988877431 1122211 233566788888999999999999874 333332 2221111122 244
Q ss_pred eEEEEEcCCCcEEEEeCCCCeeeEee-cC------CeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCC--
Q 044075 608 DLFCSCDGNSEIRFWNLSQYSCARIS-KG------GTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTE-- 678 (786)
Q Consensus 608 ~ll~sgs~Dg~I~iwDl~~~~~~~~~-~~------~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~-- 678 (786)
.++ .+..++.|+.+|..+++.+... .. ..........+..++++..++.|..+|+++++.+.........
T Consensus 78 ~v~-v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~ 156 (238)
T PF13360_consen 78 RVY-VGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGS 156 (238)
T ss_dssp EEE-EEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS
T ss_pred ccc-cccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCC
Confidence 454 4446779999999998887663 21 1122333444788999999999999999999998888764322
Q ss_pred --------EEEEEEcCCCCEEEEEeCC-e-EEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 679 --------IHSVCWDTNGEYLASVSQD-S-VRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 679 --------I~sv~~spdg~~Lasgs~D-~-I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
+..-....++ .++.++.+ . +.+ |+.+++.+.... ...+.. .....+..|++++.++.|.+||+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~--~~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~t 231 (238)
T PF13360_consen 157 SPISSFSDINGSPVISDG-RVYVSSGDGRVVAV-DLATGEKLWSKP--ISGIYS-LPSVDGGTLYVTSSDGRLYALDLKT 231 (238)
T ss_dssp --EEEETTEEEEEECCTT-EEEEECCTSSEEEE-ETTTTEEEEEEC--SS-ECE-CEECCCTEEEEEETTTEEEEEETTT
T ss_pred cceeeecccccceEEECC-EEEEEcCCCeEEEE-ECCCCCEEEEec--CCCccC-CceeeCCEEEEEeCCCEEEEEECCC
Confidence 1222222345 55555555 4 555 999999775433 222222 2456778888888999999999999
Q ss_pred CeEE
Q 044075 749 NKCM 752 (786)
Q Consensus 749 ~~~~ 752 (786)
++.+
T Consensus 232 G~~~ 235 (238)
T PF13360_consen 232 GKVV 235 (238)
T ss_dssp TEEE
T ss_pred CCEE
Confidence 9875
No 291
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=98.81 E-value=1.1e-08 Score=115.02 Aligned_cols=204 Identities=21% Similarity=0.327 Sum_probs=147.3
Q ss_pred EEeecCCCCeEEEEEcCC-CCEEEEEECCCeEEEEEcCCCe-eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcC
Q 044075 503 SSIRKSSSKVTCCHFSSD-GKLLASAGHDKKVVVWNMENFQ-TECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpd-g~~Lasgs~Dg~V~IWdl~t~~-~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl 580 (786)
..+.+|+..|+.+-|.|. ...|++++.|-.|..||+.+.. .+..+..-...-+.|+|+-....+.+.+....|++||+
T Consensus 108 f~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~ 187 (1081)
T KOG0309|consen 108 FVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDL 187 (1081)
T ss_pred EEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEec
Confidence 357799999999999994 4589999999999999998643 33444444456678999985555666677788999999
Q ss_pred CCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee----EeecCCeEEEEEeCCCCEEEEEE---
Q 044075 581 AKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA----RISKGGTVQVRFQPRLGLLLAAA--- 653 (786)
Q Consensus 581 ~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~----~~~~~~i~~i~~sp~g~~Ll~gs--- 653 (786)
+.+..++..+++|...|..++|.......+.+++.|++|++||.++.... ...+..+..-++.|-|.-.++--
T Consensus 188 r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G 267 (1081)
T KOG0309|consen 188 RKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVG 267 (1081)
T ss_pred cCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEeccccC
Confidence 99998899999999999999998766667779999999999998754322 12224444455555443222211
Q ss_pred --------CCCeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCC----------CCEEEEEeCC-eEEEEECCC
Q 044075 654 --------SENVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTN----------GEYLASVSQD-SVRVWSLAS 706 (786)
Q Consensus 654 --------~dg~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spd----------g~~Lasgs~D-~I~vwDl~s 706 (786)
.++....|++.++ .+++.|.+|...|...-|-.. .-.|++-+.| .+++|-+.+
T Consensus 268 ~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 268 GNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred CeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence 1222233444333 689999999998877666331 2258999999 999998764
No 292
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.78 E-value=4.9e-08 Score=104.70 Aligned_cols=247 Identities=13% Similarity=0.151 Sum_probs=175.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC---CeeeeecCCCCCCeEEEEEccCCCEEEEEeC-CCcEEEEcCCCC
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN---FQTECTPDDHNHIITDVRFRPNSTQLATSSF-DKTVRIWDAAKP 583 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t---~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~-Dg~I~VWdl~s~ 583 (786)
|.+.|+.|..+. .+++.+++.||.++.|.-.. -+.+..+..|-..|.+++.+-++..+.+.+. |..++++|+++-
T Consensus 8 hrd~i~hv~~tk-a~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~ 86 (558)
T KOG0882|consen 8 HRDVITHVFPTK-AKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF 86 (558)
T ss_pred ccceeeeEeeeh-hheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence 778888776554 56999999999999997543 2344556778889999999999999999887 999999999876
Q ss_pred cce-eeeecCCCCCeEEEEEecCC-C-eEEEEEcCCCcEEEEeCCCCeee-----EeecCCeEEEEEeCCCCEEEEEECC
Q 044075 584 NFC-LQTYTGHNNHVMSLDFHPKK-N-DLFCSCDGNSEIRFWNLSQYSCA-----RISKGGTVQVRFQPRLGLLLAAASE 655 (786)
Q Consensus 584 ~~~-~~~~~~h~~~V~sl~~sp~g-~-~ll~sgs~Dg~I~iwDl~~~~~~-----~~~~~~i~~i~~sp~g~~Ll~gs~d 655 (786)
... ...+....+.+.++ .++.. . .+.++.-.++.|.++|-....+. ..+..++.++.+.+-+..+++....
T Consensus 87 DminmiKL~~lPg~a~wv-~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~ 165 (558)
T KOG0882|consen 87 DMINMIKLVDLPGFAEWV-TSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDIS 165 (558)
T ss_pred chhhhcccccCCCceEEe-cCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeecccc
Confidence 532 11222222222221 12211 1 33444456899999997765432 2344778899999999999999999
Q ss_pred CeEEEEEcCC------CcEEEEE---------ecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC---
Q 044075 656 NVVSIFDVET------DRLTHSF---------KGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS--- 716 (786)
Q Consensus 656 g~I~iwD~~t------~~~i~~l---------~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~--- 716 (786)
|.|.-|..+. .++...+ ........+++|+|++..+.+-+.| .|+++++++++.+..+...
T Consensus 166 gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~ 245 (558)
T KOG0882|consen 166 GMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTD 245 (558)
T ss_pred ceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchh
Confidence 9999998873 1122222 2235567899999999999999999 9999999998766544211
Q ss_pred ------------------------------CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEccc
Q 044075 717 ------------------------------GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAH 757 (786)
Q Consensus 717 ------------------------------~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h 757 (786)
....+.++|...+++|+.++--| |++.++.++.+.++.+.
T Consensus 246 ~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~gk 315 (558)
T KOG0882|consen 246 AQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRILGK 315 (558)
T ss_pred hhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEecc
Confidence 11234678888999998887664 88999999888765543
No 293
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.78 E-value=3.5e-06 Score=103.55 Aligned_cols=270 Identities=13% Similarity=0.186 Sum_probs=173.5
Q ss_pred CCeEEEEEcCCCCEEEEEEC--CC--eEEEEEcCCC---eeeeecC-----CCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 510 SKVTCCHFSSDGKLLASAGH--DK--KVVVWNMENF---QTECTPD-----DHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~--Dg--~V~IWdl~t~---~~~~~l~-----~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
..+...+|.+....++++.. .. .|.+...... +.+..+. ...+.|.++.|.++...++.+..+|.|.+
T Consensus 22 ~~~~~~~~d~~sd~i~~~~~~~~~~~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~d~~~l~~~~~~Gdi~~ 101 (928)
T PF04762_consen 22 LPITATAFDSDSDSIYFVLGPNEIDYVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLADSESLCIALASGDIIL 101 (928)
T ss_pred cccceEEEecCCCeEEEEECCCCcceEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEeccCCCcEEEEECCceEEE
Confidence 35677777775554433322 22 2333333222 2233332 34568999999999999999999999999
Q ss_pred E----cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC---------------CCeee--------
Q 044075 578 W----DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS---------------QYSCA-------- 630 (786)
Q Consensus 578 W----dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~---------------~~~~~-------- 630 (786)
. +..+.. +.....-...|.+++|+||+..++++ ..+++|.+.+.. ..+.+
T Consensus 102 ~~~~~~~~~~~--~E~VG~vd~GI~a~~WSPD~Ella~v-T~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKe 178 (928)
T PF04762_consen 102 VREDPDPDEDE--IEIVGSVDSGILAASWSPDEELLALV-TGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKE 178 (928)
T ss_pred EEccCCCCCce--eEEEEEEcCcEEEEEECCCcCEEEEE-eCCCEEEEEeccceEEEEeecCccccCCCceeeeccCccc
Confidence 9 655543 33344456789999999998866644 446666664321 00000
Q ss_pred Ee---------------------------ecCCeEEEEEeCCCCEEEEEEC---C---CeEEEEEcCCCcEEEEEecCCC
Q 044075 631 RI---------------------------SKGGTVQVRFQPRLGLLLAAAS---E---NVVSIFDVETDRLTHSFKGHST 677 (786)
Q Consensus 631 ~~---------------------------~~~~i~~i~~sp~g~~Ll~gs~---d---g~I~iwD~~t~~~i~~l~~h~~ 677 (786)
.. .......|+|-.||.+|++.+. . ..|+||+-+ |.+...-+.-.+
T Consensus 179 TQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~g 257 (928)
T PF04762_consen 179 TQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDG 257 (928)
T ss_pred CccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCC
Confidence 00 1124466889999999999886 2 478999976 555444443334
Q ss_pred CEEEEEEcCCCCEEEEEeC---C-eEEEEECCCCeeEEEE----ccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC
Q 044075 678 EIHSVCWDTNGEYLASVSQ---D-SVRVWSLASGECIHEL----SSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 678 ~I~sv~~spdg~~Lasgs~---D-~I~vwDl~s~~~i~~l----~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~ 749 (786)
--.+++|-|.|.+|++.-. . .|.+|.- +|-....| ......|..+.|++++..|++...|. |.+|-..+.
T Consensus 258 Le~~l~WrPsG~lIA~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NY 335 (928)
T PF04762_consen 258 LEGALSWRPSGNLIASSQRLPDRHDVVFFER-NGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNY 335 (928)
T ss_pred ccCCccCCCCCCEEEEEEEcCCCcEEEEEec-CCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCC
Confidence 4457899999999998865 2 6777774 33322232 23456899999999999999877654 999999887
Q ss_pred eEE---EE-cccCCCeEEEEEcCCCC-EEEEEeCCCcEEEe
Q 044075 750 KCM---TI-AAHDCVISALAQSPVTG-MVASASHDKSVKIW 785 (786)
Q Consensus 750 ~~~---~~-~~h~~~V~slafspdg~-~LaSgs~DG~I~IW 785 (786)
... .+ ......+..+.|+|... .|...+.+|.+.++
T Consensus 336 HWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~ 376 (928)
T PF04762_consen 336 HWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIY 376 (928)
T ss_pred EEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEE
Confidence 643 22 22334456699999655 46666665666554
No 294
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.75 E-value=1.3e-06 Score=88.53 Aligned_cols=227 Identities=13% Similarity=0.042 Sum_probs=148.5
Q ss_pred CCEEEEEECCCeEEEEEcCCCeee-eecCCCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeE
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTE-CTPDDHNHIITDVRFRP-NSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVM 598 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~-~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~ 598 (786)
..+||.|+.-|...+|...+.+.. .....|...|+-+.=.. ....+..++.|.++++.+++.+......... .-.+.
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~-~~~~n 162 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQ-NLTQN 162 (344)
T ss_pred ccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeecc-cccee
Confidence 457999999999999999865443 33344544443322211 2235777888999999988754421111111 12388
Q ss_pred EEEEecCCCeEEEEEcCCCcEEEEeCCCCe--eeEe----ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEE--
Q 044075 599 SLDFHPKKNDLFCSCDGNSEIRFWNLSQYS--CARI----SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTH-- 670 (786)
Q Consensus 599 sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~--~~~~----~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~-- 670 (786)
++.+++++..+. +.+....|.+|.+.... .+++ ...+-.+..|+.....++++..||++.|||++......
T Consensus 163 s~~~snd~~~~~-~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~ 241 (344)
T KOG4532|consen 163 SLHYSNDPSWGS-SVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAE 241 (344)
T ss_pred eeEEcCCCceEE-EecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhh
Confidence 999999888666 55557788899887533 2221 22556778899999999999999999999999763322
Q ss_pred ---EEecCCCCEEEEEEcCCCCE-EEEEeCC--eEEEEECCCCeeEEEEccCC--------CceEEEEEeCCCCEEEEEE
Q 044075 671 ---SFKGHSTEIHSVCWDTNGEY-LASVSQD--SVRVWSLASGECIHELSSSG--------NKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 671 ---~l~~h~~~I~sv~~spdg~~-Lasgs~D--~I~vwDl~s~~~i~~l~~~~--------~~I~sv~fspdg~~L~sgs 736 (786)
+-..|.+.+..+.|++.|.+ |+.-++. .+.|.|+++++....+.... ..|....|+.++..+.+.+
T Consensus 242 ~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~ 321 (344)
T KOG4532|consen 242 ISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKN 321 (344)
T ss_pred hcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCccccccc
Confidence 22248999999999986542 3334444 89999999987555443332 2366667777766666555
Q ss_pred CCCeEEEEECCCCe
Q 044075 737 GYQSLELWNMAENK 750 (786)
Q Consensus 737 ~dg~I~IwDl~~~~ 750 (786)
.+ .+.-|++....
T Consensus 322 e~-~~ae~ni~srs 334 (344)
T KOG4532|consen 322 EL-QGAEYNILSRS 334 (344)
T ss_pred ch-hhheeeccccc
Confidence 44 34455555443
No 295
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.72 E-value=8.2e-07 Score=100.81 Aligned_cols=238 Identities=16% Similarity=0.161 Sum_probs=171.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccC------------CCEEEEEeCCCcE
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPN------------STQLATSSFDKTV 575 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspd------------g~~Lasgs~Dg~I 575 (786)
|...-.++.|+|.| +||.|+ ...|.|.|..+.+.+..+..|...|+.|.|.|- .-+|+++...|.|
T Consensus 14 ~~sN~~A~Dw~~~G-LiAygs-hslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrI 91 (1062)
T KOG1912|consen 14 SRSNRNAADWSPSG-LIAYGS-HSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRI 91 (1062)
T ss_pred CcccccccccCccc-eEEEec-CceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcE
Confidence 34446788999876 677775 567999999999999999999999999999872 1256777778999
Q ss_pred EEEcCCCCcceeeeecCCCCCeEEEEEecC---CCeEEEEEcCCCcEEEEeCCCCeeeEeecC---CeEEEEEeCC-CCE
Q 044075 576 RIWDAAKPNFCLQTYTGHNNHVMSLDFHPK---KNDLFCSCDGNSEIRFWNLSQYSCARISKG---GTVQVRFQPR-LGL 648 (786)
Q Consensus 576 ~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~---g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~---~i~~i~~sp~-g~~ 648 (786)
.+||..... .+..+..|..+|..++|.+. ..+++++-....+|.+|+..+++.+..... ...++.+.|- .++
T Consensus 92 il~d~~~~s-~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh 170 (1062)
T KOG1912|consen 92 ILVDFVLAS-VINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRH 170 (1062)
T ss_pred EEEEehhhh-hhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcce
Confidence 999998866 45667778899999999763 346666777788999999999887765542 2345677773 456
Q ss_pred EEEEECCCeEEEEEcCCC-------cEEEEEecCCC------------CE-------------EEEEEcCCCCEEEEEeC
Q 044075 649 LLAAASENVVSIFDVETD-------RLTHSFKGHST------------EI-------------HSVCWDTNGEYLASVSQ 696 (786)
Q Consensus 649 Ll~gs~dg~I~iwD~~t~-------~~i~~l~~h~~------------~I-------------~sv~~spdg~~Lasgs~ 696 (786)
+.+.+..|.+.+.+.-.. +....-..|.. .+ ..++|+|.-+.++....
T Consensus 171 ~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~ 250 (1062)
T KOG1912|consen 171 FCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITF 250 (1062)
T ss_pred EEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEe
Confidence 777777787777664321 22221112221 00 12456776555544444
Q ss_pred C-eEEEEECCCCeeEEEEccCCCceEEEEEeCCC--CEEEEEECCCeEEEEECCC
Q 044075 697 D-SVRVWSLASGECIHELSSSGNKFHSCIFHPSY--PTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 697 D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg--~~L~sgs~dg~I~IwDl~~ 748 (786)
. .+.|+|++-..++.......+.+.-+.+-|+. ..|++.-.+|.+.||-.+.
T Consensus 251 prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 251 PRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred ccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence 4 89999999888888887777766667777765 5799999999999997654
No 296
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.71 E-value=1.6e-05 Score=84.22 Aligned_cols=240 Identities=13% Similarity=0.104 Sum_probs=161.7
Q ss_pred eEEEEEcC-CCCEEEEEECCCe-EEEEEcCCCeeeeecCCCCCCe--EEEEEccCCCEEEEEeC-----CCcEEEEcCCC
Q 044075 512 VTCCHFSS-DGKLLASAGHDKK-VVVWNMENFQTECTPDDHNHII--TDVRFRPNSTQLATSSF-----DKTVRIWDAAK 582 (786)
Q Consensus 512 V~~lafSp-dg~~Lasgs~Dg~-V~IWdl~t~~~~~~l~~h~~~V--~sl~fspdg~~Lasgs~-----Dg~I~VWdl~s 582 (786)
...++.+| .+..++.+-.-|. ..+||..+++....+....+.- =.-+|++||++|++.-. .|.|-|||...
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~ 86 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR 86 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence 34577888 5556666666554 7889999988887764433322 13679999999998754 48899999995
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCC--CEEEEEECCCeEEE
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRL--GLLLAAASENVVSI 660 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g--~~Ll~gs~dg~I~i 660 (786)
.-..+..+..|.-.-..+.+.|+++.|++.-+ -|. -+|+. ..|-..+.+..+..
T Consensus 87 ~~~ri~E~~s~GIGPHel~l~pDG~tLvVANG---GI~---------------------Thpd~GR~kLNl~tM~psL~~ 142 (305)
T PF07433_consen 87 GYRRIGEFPSHGIGPHELLLMPDGETLVVANG---GIE---------------------THPDSGRAKLNLDTMQPSLVY 142 (305)
T ss_pred CcEEEeEecCCCcChhhEEEcCCCCEEEEEcC---CCc---------------------cCcccCceecChhhcCCceEE
Confidence 44456677777767788899999987775532 221 11221 12223344566777
Q ss_pred EEcCCCcEEEEEe----cCCCCEEEEEEcCCCCEEEEEeCC--------eEEEEECCCCeeEEEEcc-------CCCceE
Q 044075 661 FDVETDRLTHSFK----GHSTEIHSVCWDTNGEYLASVSQD--------SVRVWSLASGECIHELSS-------SGNKFH 721 (786)
Q Consensus 661 wD~~t~~~i~~l~----~h~~~I~sv~~spdg~~Lasgs~D--------~I~vwDl~s~~~i~~l~~-------~~~~I~ 721 (786)
.|..+++++.... .|..+|..+++.++|..++.+-.. -|-+++.. ..+..+.. -.+.+-
T Consensus 143 ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g--~~~~~~~~p~~~~~~l~~Y~g 220 (305)
T PF07433_consen 143 LDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRG--GALRLLPAPEEQWRRLNGYIG 220 (305)
T ss_pred EecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCC--CcceeccCChHHHHhhCCceE
Confidence 8888888777633 377889999999999887766421 24444433 32333322 246789
Q ss_pred EEEEeCCCCEEEEEECCC-eEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCC
Q 044075 722 SCIFHPSYPTLMVIGGYQ-SLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHD 779 (786)
Q Consensus 722 sv~fspdg~~L~sgs~dg-~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~D 779 (786)
+|+++.++..+++++-.| .+.+||..++.++....-. .+..|+..+++ +++|.+..
T Consensus 221 SIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~-D~cGva~~~~~-f~~ssG~G 277 (305)
T PF07433_consen 221 SIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLP-DACGVAPTDDG-FLVSSGQG 277 (305)
T ss_pred EEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccC-ceeeeeecCCc-eEEeCCCc
Confidence 999999999888777664 8999999999987554332 35566666665 66665543
No 297
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.70 E-value=6.5e-06 Score=84.86 Aligned_cols=227 Identities=19% Similarity=0.224 Sum_probs=135.7
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEEcCCC--eeeee---cCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceee
Q 044075 514 CCHFSSDGKLLASAGHDKKVVVWNMENF--QTECT---PDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQ 588 (786)
Q Consensus 514 ~lafSpdg~~Lasgs~Dg~V~IWdl~t~--~~~~~---l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~ 588 (786)
.++.+.||++||+. .|..|.|-..++. ..+.+ .+...-.=+.++|+||+.+||.+...|+|++||+.... +..
T Consensus 2 ~~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~ 79 (282)
T PF15492_consen 2 HLALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFV 79 (282)
T ss_pred ceeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce-eEE
Confidence 35678899988886 5778888776531 11222 23333345789999999999999999999999997533 111
Q ss_pred eec------CCCCCeEEEEEecCC-----CeEEEEEcCCCcEEEEeCCC-----CeeeEe------ecCCeEEEEEeCCC
Q 044075 589 TYT------GHNNHVMSLDFHPKK-----NDLFCSCDGNSEIRFWNLSQ-----YSCARI------SKGGTVQVRFQPRL 646 (786)
Q Consensus 589 ~~~------~h~~~V~sl~~sp~g-----~~ll~sgs~Dg~I~iwDl~~-----~~~~~~------~~~~i~~i~~sp~g 646 (786)
.-. .-...|..+.|.+.. ...++.-..+|.++-|-+.. ...... ...++.++.++|..
T Consensus 80 I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h 159 (282)
T PF15492_consen 80 IPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKH 159 (282)
T ss_pred cCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCC
Confidence 111 123567777776543 22344555577777776532 122222 23688999999999
Q ss_pred CEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCE-E-EEEeCC-------eEEEEECCCCeeEEEEccCC
Q 044075 647 GLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEY-L-ASVSQD-------SVRVWSLASGECIHELSSSG 717 (786)
Q Consensus 647 ~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~-L-asgs~D-------~I~vwDl~s~~~i~~l~~~~ 717 (786)
+.|++|+.... +++. -......+++-..-.+..| . +...++ +..+|.+-+.+.........
T Consensus 160 ~LLlVgG~~~~------~~~~----s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~ 229 (282)
T PF15492_consen 160 RLLLVGGCEQN------QDGM----SKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQ 229 (282)
T ss_pred CEEEEeccCCC------CCcc----ccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCC
Confidence 99888876432 0000 0001112222222111111 1 112212 12334433333322223456
Q ss_pred CceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 718 NKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 718 ~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
..|..+..+|||..|++...+|.|.+|++..-+..
T Consensus 230 d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~ 264 (282)
T PF15492_consen 230 DGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQ 264 (282)
T ss_pred CceEEEEECCCCCEEEEEEcCCeEEEEecCcchhh
Confidence 78999999999999999999999999999876544
No 298
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.69 E-value=7.4e-06 Score=92.24 Aligned_cols=252 Identities=10% Similarity=0.035 Sum_probs=156.1
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCe---
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHV--- 597 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V--- 597 (786)
+..++.++.+|.|..+|.++++.+-.............. .+..++++..++.|..+|..+++. +..+......+
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~-~W~~~~~~~~~~~~ 196 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVV--SDGLVLVHTSNGMLQALNESDGAV-KWTVNLDVPSLTLR 196 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEE--ECCEEEEECCCCEEEEEEccCCCE-eeeecCCCCccccc
Confidence 556777888999999999999988777544322111222 244677788899999999998874 33322111000
Q ss_pred --EEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC--C--------eEEEEEeC--CCCEEEEEECCCeEEEEEc
Q 044075 598 --MSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKG--G--------TVQVRFQP--RLGLLLAAASENVVSIFDV 663 (786)
Q Consensus 598 --~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~--~--------i~~i~~sp--~g~~Ll~gs~dg~I~iwD~ 663 (786)
.+-... +..++ .++.++.+..+|..+++....... . ...+..+| .++.+++++.++.+..+|.
T Consensus 197 ~~~sP~v~--~~~v~-~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~ 273 (394)
T PRK11138 197 GESAPATA--FGGAI-VGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDL 273 (394)
T ss_pred CCCCCEEE--CCEEE-EEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEEC
Confidence 111111 23343 566789999999888775443220 0 00111112 3567888888999999999
Q ss_pred CCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCC-CceEEEEEeCCCCEEEEEECCCeE
Q 044075 664 ETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSG-NKFHSCIFHPSYPTLMVIGGYQSL 741 (786)
Q Consensus 664 ~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~-~~I~sv~fspdg~~L~sgs~dg~I 741 (786)
.+++.+..... . ....+. ..+..|+.++.+ .+..+|..+++.+....... ....+..+ .+.+|++++.+|.|
T Consensus 274 ~tG~~~W~~~~-~-~~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l 347 (394)
T PRK11138 274 RSGQIVWKREY-G-SVNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYL 347 (394)
T ss_pred CCCCEEEeecC-C-CccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEE
Confidence 99988766542 1 111222 235566666666 99999999998776543221 12222223 25578899999999
Q ss_pred EEEECCCCeEEEEcc-cCCCeE-EEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 742 ELWNMAENKCMTIAA-HDCVIS-ALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 742 ~IwDl~~~~~~~~~~-h~~~V~-slafspdg~~LaSgs~DG~I~IWd 786 (786)
+++|..+++.+.... ....+. ...+. +..|+.++.||.|..++
T Consensus 348 ~~ld~~tG~~~~~~~~~~~~~~s~P~~~--~~~l~v~t~~G~l~~~~ 392 (394)
T PRK11138 348 HWINREDGRFVAQQKVDSSGFLSEPVVA--DDKLLIQARDGTVYAIT 392 (394)
T ss_pred EEEECCCCCEEEEEEcCCCcceeCCEEE--CCEEEEEeCCceEEEEe
Confidence 999999998773332 222232 22332 45788889999988764
No 299
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.66 E-value=2.2e-07 Score=93.65 Aligned_cols=248 Identities=11% Similarity=0.164 Sum_probs=138.4
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEEcCCCe------------eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 512 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQ------------TECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 512 V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~------------~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
|+.+.|+-+ ..|+++..++.+..+...++. ..+.+..|.++-.+-+.+--++.++++..||.+.+++
T Consensus 39 ~~~~~~v~~-~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s 117 (319)
T KOG4714|consen 39 LSKVSLSAE-YILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFS 117 (319)
T ss_pred EEEeechhh-heeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEecCCCceEEEEe
Confidence 444555432 345555555544444333222 2223333433333333333466799999999999999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEc-----CCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCE-EE
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCD-----GNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGL-LL 650 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs-----~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~-Ll 650 (786)
.+...........-...-.+.++...++.+. ++. .-+..+.|+++..+.+...+ ..+.+++-+|.-.. ++
T Consensus 118 ~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~-s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~ 196 (319)
T KOG4714|consen 118 TDKDLALMSRIPSIHSGSASRKICRHGNSIL-SGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVC 196 (319)
T ss_pred chHHHhhhhhcccccccccccceeecccEEe-cCCcceEeeccceeeecccccccccccccccccchhhhCCcccccEEE
Confidence 8763221121111111122223332333332 221 12345667776544333222 34777888886654 55
Q ss_pred EEECCCeEEEEEcCCCc-EEEEEecCCCCEEEEEEcC-CCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeC
Q 044075 651 AAASENVVSIFDVETDR-LTHSFKGHSTEIHSVCWDT-NGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHP 727 (786)
Q Consensus 651 ~gs~dg~I~iwD~~t~~-~i~~l~~h~~~I~sv~~sp-dg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fsp 727 (786)
+|+.||.+.+||.+... ++..++.|+.+|..|-|+| ++..|+++++| .+.-||..+ +.+. +++
T Consensus 197 cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~-~~l~-------------i~~ 262 (319)
T KOG4714|consen 197 CGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST-TFLS-------------ISN 262 (319)
T ss_pred EecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC-ceEE-------------ecC
Confidence 66678999999999874 3445667999999999999 67899999999 999999765 1111 111
Q ss_pred CCCEEEEEECCCeEEEEE---CCCCeE-E--EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 728 SYPTLMVIGGYQSLELWN---MAENKC-M--TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 728 dg~~L~sgs~dg~I~IwD---l~~~~~-~--~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.. ..+..|= ...... + .+......|+++... |..|++|++-+.|++++
T Consensus 263 ~~---------s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV~--g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 263 QA---------SVISSWLSGDPVKSRIEITSLLPSRSLSINSFDVL--GPCLVCGTDAEAIYLTR 316 (319)
T ss_pred cc---------ccccccccCCcccceEeeeccccccceeeeeeecc--CceEEeccccceEEEec
Confidence 11 1233331 111111 0 112233456666655 78899999989998874
No 300
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.64 E-value=9.5e-07 Score=95.05 Aligned_cols=213 Identities=17% Similarity=0.155 Sum_probs=154.7
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEEC-CCeEEEEEcCCCeeeeecCC--CCCCeEEEEEccCC-C-EEEEE-eCC
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGH-DKKVVVWNMENFQTECTPDD--HNHIITDVRFRPNS-T-QLATS-SFD 572 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~-Dg~V~IWdl~t~~~~~~l~~--h~~~V~sl~fspdg-~-~Lasg-s~D 572 (786)
.+.++.++.|-+.|.+++.+-+|.+++|++. |..++++|+++...+.-++. ..+.+.+ ..++.. . .|+++ -.+
T Consensus 43 vEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~w-v~skGd~~s~IAVs~~~s 121 (558)
T KOG0882|consen 43 VEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEW-VTSKGDKISLIAVSLFKS 121 (558)
T ss_pred eeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCCceEE-ecCCCCeeeeEEeecccC
Confidence 3566788899999999999999999999887 99999999997665533322 2222222 122221 1 33333 347
Q ss_pred CcEEEEcCCCCcc-eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC------CeeeE------------ee
Q 044075 573 KTVRIWDAAKPNF-CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ------YSCAR------------IS 633 (786)
Q Consensus 573 g~I~VWdl~s~~~-~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~------~~~~~------------~~ 633 (786)
+.|.|+|-..... ....-.-|..+|.++.+.+.++..+ +.+..|.|..|.... .+... ..
T Consensus 122 g~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~v-SiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~ 200 (558)
T KOG0882|consen 122 GKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAV-SIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKA 200 (558)
T ss_pred CCcEEECCcCCcCccceecccccCceEEEEeecccccee-eccccceeEeecCCCcccCccccccccccccchhhccccc
Confidence 8999999876542 2334456899999999999887665 888899999998873 11111 11
Q ss_pred cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec--------------------------------CC-CCEE
Q 044075 634 KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG--------------------------------HS-TEIH 680 (786)
Q Consensus 634 ~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~--------------------------------h~-~~I~ 680 (786)
+....+++|+|++..+.+.+.|..|++++.++++++..+.. |. ..-+
T Consensus 201 Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~ 280 (558)
T KOG0882|consen 201 KTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGT 280 (558)
T ss_pred ccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccc
Confidence 24567899999999999999999999999999876655421 11 1234
Q ss_pred EEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEE
Q 044075 681 SVCWDTNGEYLASVSQDSVRVWSLASGECIHEL 713 (786)
Q Consensus 681 sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l 713 (786)
.++|+..+++|+.++-=.|+|.++.++++++.+
T Consensus 281 ~~~fdes~~flly~t~~gikvin~~tn~v~ri~ 313 (558)
T KOG0882|consen 281 NAVFDESGNFLLYGTILGIKVINLDTNTVVRIL 313 (558)
T ss_pred eeEEcCCCCEEEeecceeEEEEEeecCeEEEEe
Confidence 678889999999888778999999999887766
No 301
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=2e-06 Score=91.68 Aligned_cols=248 Identities=14% Similarity=0.176 Sum_probs=150.8
Q ss_pred EEEEEcCCCeeeeecCCCCCCeEEEEEccCCC-EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEE
Q 044075 533 VVVWNMENFQTECTPDDHNHIITDVRFRPNST-QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFC 611 (786)
Q Consensus 533 V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~-~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~ 611 (786)
|++.+..+.+....+..|...|.+++|+|..+ ++..++.+..|+|.|+++.. ++..+..+ ..+++++|.-+..+.++
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~-~vssy~a~-~~~wSC~wDlde~h~IY 252 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSC-VVSSYIAY-NQIWSCCWDLDERHVIY 252 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccce-eeeheecc-CCceeeeeccCCcceeE
Confidence 66677677777777788899999999999766 78889999999999999866 56667766 78999999999999999
Q ss_pred EEcCCCcEEEEeCCCCeeeEe------ecCCeEEEE------EeCCCCEEEEEECCCeEEEEEcC----CCcEEEEEecC
Q 044075 612 SCDGNSEIRFWNLSQYSCARI------SKGGTVQVR------FQPRLGLLLAAASENVVSIFDVE----TDRLTHSFKGH 675 (786)
Q Consensus 612 sgs~Dg~I~iwDl~~~~~~~~------~~~~i~~i~------~sp~g~~Ll~gs~dg~I~iwD~~----t~~~i~~l~~h 675 (786)
.|..+|.|.|||++..+.... ...++..++ ..+.+..++....+ +..|++. ...++..+. .
T Consensus 253 aGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele-~ 329 (463)
T KOG1645|consen 253 AGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELE-P 329 (463)
T ss_pred EeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccC-C
Confidence 999999999999986543211 112333332 23334444444332 2334332 112222222 2
Q ss_pred CCCEEEEEEcCCCCE-EEEEeCC----eEEE----EECCCCeeEEEEc-cC-CCce------EEEEEeCCCCEEEEEEC-
Q 044075 676 STEIHSVCWDTNGEY-LASVSQD----SVRV----WSLASGECIHELS-SS-GNKF------HSCIFHPSYPTLMVIGG- 737 (786)
Q Consensus 676 ~~~I~sv~~spdg~~-Lasgs~D----~I~v----wDl~s~~~i~~l~-~~-~~~I------~sv~fspdg~~L~sgs~- 737 (786)
.+...++.+++-.+. |++.-.+ .++. -|..+|..+...+ .+ +.+- ..+.-.++.++|+..+.
T Consensus 330 pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~ 409 (463)
T KOG1645|consen 330 PGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDS 409 (463)
T ss_pred CcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCC
Confidence 334445555553333 3333321 1111 1223343332221 11 1111 11222344455554443
Q ss_pred CCeEEEEECCCCeEEEEcccCCCeEEEEEcCC--CCEEEEEeCCCcEEEeC
Q 044075 738 YQSLELWNMAENKCMTIAAHDCVISALAQSPV--TGMVASASHDKSVKIWK 786 (786)
Q Consensus 738 dg~I~IwDl~~~~~~~~~~h~~~V~slafspd--g~~LaSgs~DG~I~IWd 786 (786)
.+.+.+||..+.+.+....-..+|.+++.... +.+|++-. |..++||+
T Consensus 410 tn~lil~D~~s~evvQ~l~~~epv~Dicp~~~n~~syLa~LT-d~~v~Iyk 459 (463)
T KOG1645|consen 410 TNELILQDPHSFEVVQTLALSEPVLDICPNDTNGSSYLALLT-DDRVHIYK 459 (463)
T ss_pred cceeEEeccchhheeeecccCcceeecceeecCCcchhhhee-cceEEEEe
Confidence 35899999999999877777789988876542 33666655 55788874
No 302
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.63 E-value=5.2e-07 Score=96.17 Aligned_cols=121 Identities=14% Similarity=0.207 Sum_probs=89.6
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeee
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTY 590 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~ 590 (786)
.|+.+..+......-..+....+.+|+...+.. ..+-+|-+.+++|+|+||+.+|+++..|..|+|-...........+
T Consensus 112 ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~-~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesfc 190 (390)
T KOG3914|consen 112 AISFIREDTSVLVADKAGDVYSFDILSADSGRC-EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFC 190 (390)
T ss_pred eeeeeeccceEEEEeecCCceeeeeecccccCc-chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhc
Confidence 344444333322223334455666777666444 3445899999999999999999999999999998887655444566
Q ss_pred cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec
Q 044075 591 TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK 634 (786)
Q Consensus 591 ~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~ 634 (786)
.||+..|..++..++ +++++++.|++|++||+.+++++..+.
T Consensus 191 lGH~eFVS~isl~~~--~~LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 191 LGHKEFVSTISLTDN--YLLLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred cccHhheeeeeeccC--ceeeecCCCCcEEEEecccCCcccccc
Confidence 789999999999864 446699999999999999998875543
No 303
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.63 E-value=1.2e-05 Score=90.43 Aligned_cols=253 Identities=9% Similarity=0.043 Sum_probs=153.1
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCCC----------CeE-EEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHNH----------IIT-DVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~----------~V~-sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
+..+++++.+|.|.-+|.++++.+-....... .+. .+.. ++..+++++.++.+..+|.++++. +..
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~-~W~ 145 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEV-AWQ 145 (394)
T ss_pred CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCC-ccc
Confidence 55777778889999999999888766533220 000 1111 355677888899999999998874 333
Q ss_pred ecCCCCCeEE-EEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEE----EEeC--CCCEEEEEECCCeEEEEE
Q 044075 590 YTGHNNHVMS-LDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQV----RFQP--RLGLLLAAASENVVSIFD 662 (786)
Q Consensus 590 ~~~h~~~V~s-l~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i----~~sp--~g~~Ll~gs~dg~I~iwD 662 (786)
.... ..+.+ .... +..++ .+..++.|..+|..+++.+-........+ ..+| .+..+++++.++.+..+|
T Consensus 146 ~~~~-~~~~ssP~v~--~~~v~-v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d 221 (394)
T PRK11138 146 TKVA-GEALSRPVVS--DGLVL-VHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVL 221 (394)
T ss_pred ccCC-CceecCCEEE--CCEEE-EECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEE
Confidence 3222 22222 1222 33344 56778999999999988776554221110 0011 234678888899999999
Q ss_pred cCCCcEEEEEecCCC-------CEEEEEEcC--CCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEE
Q 044075 663 VETDRLTHSFKGHST-------EIHSVCWDT--NGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTL 732 (786)
Q Consensus 663 ~~t~~~i~~l~~h~~-------~I~sv~~sp--dg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L 732 (786)
..+++.+........ ....+..+| .+..+++++.+ .+..+|..+++.+.+.... ....+.. .+..|
T Consensus 222 ~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~--~~~~~~~--~~~~v 297 (394)
T PRK11138 222 MEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYG--SVNDFAV--DGGRI 297 (394)
T ss_pred ccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCC--CccCcEE--ECCEE
Confidence 999987765432110 011111122 24455556656 9999999999887665322 1112222 45678
Q ss_pred EEEECCCeEEEEECCCCeEEEEcc-c-CCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 733 MVIGGYQSLELWNMAENKCMTIAA-H-DCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 733 ~sgs~dg~I~IwDl~~~~~~~~~~-h-~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
++++.++.|..+|..+++.+-... - .....+..+. +.+|+.++.||.|.+.|
T Consensus 298 y~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~--~g~l~v~~~~G~l~~ld 351 (394)
T PRK11138 298 YLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLY--NGYLVVGDSEGYLHWIN 351 (394)
T ss_pred EEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEEE--CCEEEEEeCCCEEEEEE
Confidence 888999999999999987653221 1 1112222222 45677788888877653
No 304
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.62 E-value=2.7e-07 Score=94.94 Aligned_cols=230 Identities=18% Similarity=0.319 Sum_probs=144.7
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce----eeeecCCC------------CCeEEEEEecC-CCeEEEE
Q 044075 550 HNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC----LQTYTGHN------------NHVMSLDFHPK-KNDLFCS 612 (786)
Q Consensus 550 h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~----~~~~~~h~------------~~V~sl~~sp~-g~~ll~s 612 (786)
....|++|.|...|.+|++|...|.|.+|.-+....| ...+.+|. ..|..|.|..+ +..-|..
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 3457999999999999999999999999976654322 12233332 34777887654 3444556
Q ss_pred EcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEE--------C-CCeEEEEEcCCCcEEEEE-ecCCCCEEEE
Q 044075 613 CDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAA--------S-ENVVSIFDVETDRLTHSF-KGHSTEIHSV 682 (786)
Q Consensus 613 gs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs--------~-dg~I~iwD~~t~~~i~~l-~~h~~~I~sv 682 (786)
.+.|.+|++|.+.......+.......-.-+|.++-+.+.. . |..|... +.+.. ..|...|++|
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~------p~rvyaNaH~yhiNSi 178 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAK------PCRVYANAHPYHINSI 178 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEec------cceeccccceeEeeee
Confidence 77899999999986543332222111111122221111100 0 1111111 11112 3488889999
Q ss_pred EEcCCCCEEEEEeCCeEEEEECCCCe---eEEEEccCC-----CceEEEEEeCCC-CEEEEEECCCeEEEEECCCC----
Q 044075 683 CWDTNGEYLASVSQDSVRVWSLASGE---CIHELSSSG-----NKFHSCIFHPSY-PTLMVIGGYQSLELWNMAEN---- 749 (786)
Q Consensus 683 ~~spdg~~Lasgs~D~I~vwDl~s~~---~i~~l~~~~-----~~I~sv~fspdg-~~L~sgs~dg~I~IwDl~~~---- 749 (786)
.|..|...++++.+=.|.+|++.... .+-.++.|. ..|++..|+|.. ..+...+..|.|++-|++..
T Consensus 179 S~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcd 258 (460)
T COG5170 179 SFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCD 258 (460)
T ss_pred eecCchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhcc
Confidence 99999888876543399999987532 233344442 357888999964 56777788899999999843
Q ss_pred -eEE----E--------EcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 750 -KCM----T--------IAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 750 -~~~----~--------~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.+. . +..-...|.++.|+++|++|++-+. -+|+|||
T Consensus 259 n~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwD 307 (460)
T COG5170 259 NSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWD 307 (460)
T ss_pred CchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEe
Confidence 221 1 1223457899999999999987654 4899997
No 305
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.61 E-value=1.2e-06 Score=93.14 Aligned_cols=245 Identities=12% Similarity=0.119 Sum_probs=154.4
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCC-CEEEEEeCCCcE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGK-LLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNS-TQLATSSFDKTV 575 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~-~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg-~~Lasgs~Dg~I 575 (786)
+|+...-+.+|...|..++|||..+ +|..++.+.+|+|.|+++...+..+..+ ..+++++|.-|. ++|+.|-..|.|
T Consensus 182 ~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~V 260 (463)
T KOG1645|consen 182 DFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMV 260 (463)
T ss_pred CcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceE
Confidence 3444456778899999999999776 7888999999999999999999999888 789999999865 467777789999
Q ss_pred EEEcCCCCcceeeeecC--CCCCeEEEEEecC------CCeEEEEEcCCCcEEEEeCCCC----eeeEeec--CCeEEEE
Q 044075 576 RIWDAAKPNFCLQTYTG--HNNHVMSLDFHPK------KNDLFCSCDGNSEIRFWNLSQY----SCARISK--GGTVQVR 641 (786)
Q Consensus 576 ~VWdl~s~~~~~~~~~~--h~~~V~sl~~sp~------g~~ll~sgs~Dg~I~iwDl~~~----~~~~~~~--~~i~~i~ 641 (786)
.|||++..+..+..+.+ ...+|..|+.-+- +. +++... -.+.+|++... .++.... +...++.
T Consensus 261 lvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gg-lLv~~l--t~l~f~ei~~s~~~~p~vlele~pG~cismq 337 (463)
T KOG1645|consen 261 LVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGG-LLVFAL--TVLQFYEIVFSAECLPCVLELEPPGICISMQ 337 (463)
T ss_pred EEEEccCCCchHhhhhhhhccCcceeecccCccccccccc-eEEeee--hhhhhhhhhccccCCCcccccCCCcceeeee
Confidence 99999987765555544 2345555554332 22 222222 23455655422 2222222 3445555
Q ss_pred EeCCCCEEEEEECCC--------eEEEEEcCCCcEEEEEe-cC-CCCE------EEEEEcCCCCEEEEEeCC--eEEEEE
Q 044075 642 FQPRLGLLLAAASEN--------VVSIFDVETDRLTHSFK-GH-STEI------HSVCWDTNGEYLASVSQD--SVRVWS 703 (786)
Q Consensus 642 ~sp~g~~Ll~gs~dg--------~I~iwD~~t~~~i~~l~-~h-~~~I------~sv~~spdg~~Lasgs~D--~I~vwD 703 (786)
+++..+++++....+ .+--.|.+++..+...+ ++ .+.- ..+.-.++.++|+..+++ .+.+||
T Consensus 338 y~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D 417 (463)
T KOG1645|consen 338 YHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQD 417 (463)
T ss_pred ecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCcceeEEec
Confidence 666556666655431 11112333444433222 12 1110 112223456677666655 899999
Q ss_pred CCCCeeEEEEccCCCceEEEEEe-CCCCEEEEEECCCeEEEEECC
Q 044075 704 LASGECIHELSSSGNKFHSCIFH-PSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 704 l~s~~~i~~l~~~~~~I~sv~fs-pdg~~L~sgs~dg~I~IwDl~ 747 (786)
..+.+.+.++... .+|.+++.. -++.-++..-.|..++||..+
T Consensus 418 ~~s~evvQ~l~~~-epv~Dicp~~~n~~syLa~LTd~~v~Iyk~e 461 (463)
T KOG1645|consen 418 PHSFEVVQTLALS-EPVLDICPNDTNGSSYLALLTDDRVHIYKNE 461 (463)
T ss_pred cchhheeeecccC-cceeecceeecCCcchhhheecceEEEEecC
Confidence 9999999888655 777777644 345445555556678887654
No 306
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.61 E-value=1.2e-05 Score=83.38 Aligned_cols=209 Identities=12% Similarity=0.072 Sum_probs=131.9
Q ss_pred CCcEEEEcCCCCcceeeeecCC-CCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCE
Q 044075 572 DKTVRIWDAAKPNFCLQTYTGH-NNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGL 648 (786)
Q Consensus 572 Dg~I~VWdl~s~~~~~~~~~~h-~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~ 648 (786)
+|+|..||..+++..-..-... .....+..+ ++++.++ +++.++.|+.||..+++.+.... ..+... ....+..
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~-~~~~~v~-~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~-~~~~~~~ 78 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAV-PDGGRVY-VASGDGNLYALDAKTGKVLWRFDLPGPISGA-PVVDGGR 78 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEE-EETTEEE-EEETTSEEEEEETTTSEEEEEEECSSCGGSG-EEEETTE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEE-EeCCEEE-EEcCCCEEEEEECCCCCEEEEeeccccccce-eeecccc
Confidence 6889999998877432221111 122222222 2455555 55789999999999998765544 221111 2345567
Q ss_pred EEEEECCCeEEEEEcCCCcEEEEE-ecCC---CCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCc----
Q 044075 649 LLAAASENVVSIFDVETDRLTHSF-KGHS---TEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNK---- 719 (786)
Q Consensus 649 Ll~gs~dg~I~iwD~~t~~~i~~l-~~h~---~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~---- 719 (786)
+++++.++.|+.+|.++++.+... .... ..........++..++++..+ .|..+|+++|+.+.........
T Consensus 79 v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~ 158 (238)
T PF13360_consen 79 VYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSP 158 (238)
T ss_dssp EEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--
T ss_pred cccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcc
Confidence 788888899999999999998884 3221 112222333347778888756 9999999999998888664322
Q ss_pred ------eEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 720 ------FHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 720 ------I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+..-.+..++ .+++++.++.+..+|+.+++.+. ......+..+ ...++..|+.++.|+.|.+||
T Consensus 159 ~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w-~~~~~~~~~~-~~~~~~~l~~~~~~~~l~~~d 228 (238)
T PF13360_consen 159 ISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLW-SKPISGIYSL-PSVDGGTLYVTSSDGRLYALD 228 (238)
T ss_dssp EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEE-EECSS-ECEC-EECCCTEEEEEETTTEEEEEE
T ss_pred eeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEE-EecCCCccCC-ceeeCCEEEEEeCCCEEEEEE
Confidence 1122222334 78888888864444999998663 2223333332 346677888888999999886
No 307
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.60 E-value=2.1e-08 Score=114.43 Aligned_cols=202 Identities=17% Similarity=0.277 Sum_probs=151.8
Q ss_pred CCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC-c
Q 044075 540 NFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS-E 618 (786)
Q Consensus 540 t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg-~ 618 (786)
.++...++..|....+|++|+-+.++|++|+..|.|++|++.++. ......+|...|+.+.-+.+|..++.+++... -
T Consensus 1090 RFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~-~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Pl 1168 (1516)
T KOG1832|consen 1090 RFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGS-MEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPL 1168 (1516)
T ss_pred hcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCcc-ccccccccccccccccccCCcceeeeeccccCch
Confidence 355667788899999999999999999999999999999999987 46778899999999999999998886666555 5
Q ss_pred EEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEE-e---cCCCCEEEEEEcCCCCEEEEE
Q 044075 619 IRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSF-K---GHSTEIHSVCWDTNGEYLASV 694 (786)
Q Consensus 619 I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l-~---~h~~~I~sv~~spdg~~Lasg 694 (786)
..+|++...--.+..-....++.|+.....-++|+......+||+.++.++.++ . +....-+++.|+|+.++++--
T Consensus 1169 saLW~~~s~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIlnd 1248 (1516)
T KOG1832|consen 1169 SALWDASSTGGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILND 1248 (1516)
T ss_pred HHHhccccccCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEeeC
Confidence 678998752211212234456778776666677777788999999998765552 2 122233778999998887643
Q ss_pred eCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 695 SQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 695 s~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
+ .+||++..+.++.|.... ....-.|+|.|..++.-+ .|||+++.+.+
T Consensus 1249 G----vLWDvR~~~aIh~FD~ft-~~~~G~FHP~g~eVIINS-----EIwD~RTF~lL 1296 (1516)
T KOG1832|consen 1249 G----VLWDVRIPEAIHRFDQFT-DYGGGGFHPSGNEVIINS-----EIWDMRTFKLL 1296 (1516)
T ss_pred c----eeeeeccHHHHhhhhhhe-ecccccccCCCceEEeec-----hhhhhHHHHHH
Confidence 3 589999988888776543 223446999999887754 58999987654
No 308
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.56 E-value=8.4e-07 Score=89.60 Aligned_cols=165 Identities=11% Similarity=0.147 Sum_probs=109.0
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe-eeeecCCCCCCeEEEEEccCCCEEEEEeC-----CC
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ-TECTPDDHNHIITDVRFRPNSTQLATSSF-----DK 573 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~-~~~~l~~h~~~V~sl~fspdg~~Lasgs~-----Dg 573 (786)
.+.+.+..|.++-.+-+.+-.+..++++..||.+.+++.+... ....+......-.+.+....++.+.++.. -+
T Consensus 80 ~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d 159 (319)
T KOG4714|consen 80 DPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQD 159 (319)
T ss_pred CceeeeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeecc
Confidence 3444555666666566666667789999999999999977511 11111111111222333334444444321 23
Q ss_pred cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee----eEeecCCeEEEEEeCC-CCE
Q 044075 574 TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC----ARISKGGTVQVRFQPR-LGL 648 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~----~~~~~~~i~~i~~sp~-g~~ 648 (786)
..++|+++-.+........ ...|.+++-+|...+++++|+.||.+.+||.+.... +..++..+..+-|+|. ...
T Consensus 160 ~~~a~~~~p~~t~~~~~~~-~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~ 238 (319)
T KOG4714|consen 160 NFYANTLDPIKTLIPSKKA-LDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEH 238 (319)
T ss_pred ceeeecccccccccccccc-cccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchh
Confidence 4567776644322222222 234999999999999999999999999999998643 3445678899999985 568
Q ss_pred EEEEECCCeEEEEEcCC
Q 044075 649 LLAAASENVVSIFDVET 665 (786)
Q Consensus 649 Ll~gs~dg~I~iwD~~t 665 (786)
|+++++||.+..||..+
T Consensus 239 Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 239 LFTCSEDGSLWHWDAST 255 (319)
T ss_pred eeEecCCCcEEEEcCCC
Confidence 99999999999999875
No 309
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.56 E-value=9.3e-07 Score=102.14 Aligned_cols=264 Identities=16% Similarity=0.183 Sum_probs=170.6
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCC-CeEEEEEccCCCEEEEEeC-------CCcEEEE
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNH-IITDVRFRPNSTQLATSSF-------DKTVRIW 578 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~-~V~sl~fspdg~~Lasgs~-------Dg~I~VW 578 (786)
..-+.|.+++|.+....+..|+..|.+.-+-+...+....+..|.- .|..+.-...+ +++.+. .+-+-++
T Consensus 52 ~~~G~vS~v~fd~~eel~w~G~~gG~stS~~~s~~~~yssf~v~s~~~v~~~~~~~~~--i~~ls~~alr~~~r~gl~~~ 129 (1118)
T KOG1275|consen 52 ASYGTVSSVHFDLHEELLWRGSSGGHSTSLLLSHRTGYSSFQVHSIDGVRRIEPTESG--IFTLSKTALRATTRQGLPVF 129 (1118)
T ss_pred cccccccccccCchHHhheecccCCceeeeecccccceEEEEEeccchhhhhhhhhhh--heeeeHHHhhhhhccCceee
Confidence 3445788888888888888888777766555444444444433321 12222111111 222211 1112233
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCe-EEEEEeCCCCEEEEEECCCe
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGT-VQVRFQPRLGLLLAAASENV 657 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i-~~i~~sp~g~~Ll~gs~dg~ 657 (786)
|...... . .-...+.. +...++.|+--..+..+|+++.+..+...-.. .....-.+++.+++|...|+
T Consensus 130 ~~~~~s~--~------~M~~~~~~---~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~ 198 (1118)
T KOG1275|consen 130 DFTCPSM--T------KMASSLHM---GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGT 198 (1118)
T ss_pred cccCCCH--H------HHHHHhcc---CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccce
Confidence 3322211 0 00111111 23334466667788889999887776655222 12223445688999999999
Q ss_pred EEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC---------C-eEEEEECCCCeeEEEEccCCCceEEEEEeC
Q 044075 658 VSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ---------D-SVRVWSLASGECIHELSSSGNKFHSCIFHP 727 (786)
Q Consensus 658 I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~---------D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fsp 727 (786)
|.+-|.++.+.++++..|.+.|.++. -.|+.|++|+. | .|+|||++..+.+..+..+-++ .-+.|+|
T Consensus 199 V~LrD~~s~~~iht~~aHs~siSDfD--v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~P 275 (1118)
T KOG1275|consen 199 VFLRDPNSFETIHTFDAHSGSISDFD--VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHP 275 (1118)
T ss_pred EEeecCCcCceeeeeeccccceeeee--ccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcc
Confidence 99999999999999999999998665 56888998874 4 5899999988776666555443 4567888
Q ss_pred CC-CEEEEEECCCeEEEEE---CCCCe--EEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 728 SY-PTLMVIGGYQSLELWN---MAENK--CMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 728 dg-~~L~sgs~dg~I~IwD---l~~~~--~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.. ..+++++..|...+-| +.+-. ...+......+..+++++++..++.|..+|.|.+|-
T Consensus 276 sl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 276 SLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred cccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 65 4688888899999988 33321 223334455699999999999999999999999993
No 310
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.54 E-value=1.5e-05 Score=82.25 Aligned_cols=196 Identities=14% Similarity=0.194 Sum_probs=117.4
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC-------CCCCCeEEEEEccC------CCEEEEEeCCCcEEEE
Q 044075 512 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD-------DHNHIITDVRFRPN------STQLATSSFDKTVRIW 578 (786)
Q Consensus 512 V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~-------~h~~~V~sl~fspd------g~~Lasgs~Dg~I~VW 578 (786)
=.-++||||+.+||.+...|+|+|||+..... ..+. .-...|..+.|.+. ...|++-..+|.++-|
T Consensus 46 WRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~l-f~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy 124 (282)
T PF15492_consen 46 WRKLAWSPDCTLLAYAESTGTIRVFDLMGSEL-FVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSY 124 (282)
T ss_pred heEEEECCCCcEEEEEcCCCeEEEEeccccee-EEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeE
Confidence 45689999999999999999999999875332 2322 22356777878653 2257777888888888
Q ss_pred cCCCC---cc-eeee--e-cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEE--
Q 044075 579 DAAKP---NF-CLQT--Y-TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLL-- 649 (786)
Q Consensus 579 dl~s~---~~-~~~~--~-~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~L-- 649 (786)
-+..+ +. .... + ..+...|.++.|+|..+.|+++|.....-..+ .....++++-++-.+..+.
T Consensus 125 ~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s--------~a~~~GLtaWRiL~~~Pyyk~ 196 (282)
T PF15492_consen 125 LVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMS--------KASSCGLTAWRILSDSPYYKQ 196 (282)
T ss_pred EEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccc--------cccccCceEEEEcCCCCcEEE
Confidence 76321 11 1222 2 23467899999999887777666544321111 1111222222221111111
Q ss_pred EEEECCCe------EEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC
Q 044075 650 LAAASENV------VSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS 716 (786)
Q Consensus 650 l~gs~dg~------I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~ 716 (786)
++...|+. ..+|.+-+.+...........|..+..+|||..|++...+ .|.+|++.+-+....+..+
T Consensus 197 v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~ 270 (282)
T PF15492_consen 197 VTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQD 270 (282)
T ss_pred ccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchh
Confidence 11111111 1223322222222112256789999999999999999988 9999999987777666544
No 311
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.52 E-value=0.00011 Score=74.78 Aligned_cols=256 Identities=13% Similarity=0.131 Sum_probs=140.7
Q ss_pred CCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEE
Q 044075 520 DGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMS 599 (786)
Q Consensus 520 dg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~s 599 (786)
-|++++.|+..|.+++.+.+++.....+.....-=......+++..+..++.|++.+..|..+.. ++-..+...+...+
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~-cVykskcgG~~f~s 140 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYG-CVYKSKCGGGTFVS 140 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccc-eEEecccCCceecc
Confidence 36789999999999999999998776664333211223345678899999999999999998866 44444333333334
Q ss_pred EEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec----CCeEE--EEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEe
Q 044075 600 LDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK----GGTVQ--VRFQPRLGLLLAAASENVVSIFDVETDRLTHSFK 673 (786)
Q Consensus 600 l~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----~~i~~--i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~ 673 (786)
-+..|-...++ .+...|.|.--..+......... +++.. ++. +..+..++-||.+.-|| +.++.+..+.
T Consensus 141 P~i~~g~~sly-~a~t~G~vlavt~~~~~~~~~w~~~~~~PiF~splcv---~~sv~i~~VdG~l~~f~-~sG~qvwr~~ 215 (354)
T KOG4649|consen 141 PVIAPGDGSLY-AAITAGAVLAVTKNPYSSTEFWAATRFGPIFASPLCV---GSSVIITTVDGVLTSFD-ESGRQVWRPA 215 (354)
T ss_pred ceecCCCceEE-EEeccceEEEEccCCCCcceehhhhcCCccccCceec---cceEEEEEeccEEEEEc-CCCcEEEeec
Confidence 44555334444 33334555544444332211111 12111 111 34566677788888887 5666666554
Q ss_pred cCCCCEEE-EEEc-CCCCEEEEEeCC---------eEEEEECCCCeeEEEEccCCCceEEEEEeC----CCCEEEEEECC
Q 044075 674 GHSTEIHS-VCWD-TNGEYLASVSQD---------SVRVWSLASGECIHELSSSGNKFHSCIFHP----SYPTLMVIGGY 738 (786)
Q Consensus 674 ~h~~~I~s-v~~s-pdg~~Lasgs~D---------~I~vwDl~s~~~i~~l~~~~~~I~sv~fsp----dg~~L~sgs~d 738 (786)
..++|.. -+-+ |....|..+.++ .-.+|...+|...+......- ...++. ..++|..++.|
T Consensus 216 -t~GpIf~~Pc~s~Ps~q~i~~~~~~Cf~~~~p~~ghL~w~~~~g~t~~vy~~p~l---~F~~h~~~~S~~~ll~~~s~d 291 (354)
T KOG4649|consen 216 -TKGPIFMEPCESRPSCQQISLENENCFCAPLPIAGHLLWATQSGTTLHVYLSPKL---RFDLHSPGISYPKLLRRSSGD 291 (354)
T ss_pred -CCCceecccccCCCcceEEEEecCCeEEEeccccceEEEEecCCcEEEEEeCccc---ceeccCCCCcchhhhhhhcCC
Confidence 3333321 1112 333444444444 334566666543333322111 122221 13457778889
Q ss_pred CeEEEEECCCCeEEEEcccCCCeEEEE--------E-cC--CCCEEEEEeCCCcEEEeC
Q 044075 739 QSLELWNMAENKCMTIAAHDCVISALA--------Q-SP--VTGMVASASHDKSVKIWK 786 (786)
Q Consensus 739 g~I~IwDl~~~~~~~~~~h~~~V~sla--------f-sp--dg~~LaSgs~DG~I~IWd 786 (786)
|++.|.-.+.. ...+..|.+.+-.+. | +| -+..|+.|+.|..|+-||
T Consensus 292 gkv~il~~~~s-l~~~~s~~g~lq~~~~~el~~eIFsSPvii~grl~igcRDdYv~cld 349 (354)
T KOG4649|consen 292 GKVMILMTSKS-LAEISSNGGELQNLEAIELSNEIFSSPVIIDGRLLIGCRDDYVRCLD 349 (354)
T ss_pred CcEEEEEeccc-ccccccCCCccceEEEeecCcccccCCeEEccEEEEEEccCeEEEEe
Confidence 98888744322 223333433322222 2 22 134677899999999986
No 312
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.51 E-value=8.8e-05 Score=82.27 Aligned_cols=257 Identities=13% Similarity=0.106 Sum_probs=154.7
Q ss_pred cCCCCEEEEEE---------CCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceee
Q 044075 518 SSDGKLLASAG---------HDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQ 588 (786)
Q Consensus 518 Spdg~~Lasgs---------~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~ 588 (786)
|||+++++... ..+.+.|||+++++....... ...+....|+|+|+.++... ++.|.+++..++.....
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~l 78 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQL 78 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEES
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEe
Confidence 67888877742 356799999999766555443 66789999999999998887 57899999877643222
Q ss_pred eecCC----------------CCCeEEEEEecCCCeEEEEEcCCCcEEE-------------------------------
Q 044075 589 TYTGH----------------NNHVMSLDFHPKKNDLFCSCDGNSEIRF------------------------------- 621 (786)
Q Consensus 589 ~~~~h----------------~~~V~sl~~sp~g~~ll~sgs~Dg~I~i------------------------------- 621 (786)
+..+. -+.-..+-|+|+++.+++.--.+..|..
T Consensus 79 T~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v 158 (353)
T PF00930_consen 79 TTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRV 158 (353)
T ss_dssp ES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EE
T ss_pred ccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCce
Confidence 22220 1123568899999988765544443333
Q ss_pred ----EeCCCCeeeEe--e------cCCeEEEEEeCCCCEEEEEECC-----CeEEEEEcCCCcEEEEEec-CCCCE---E
Q 044075 622 ----WNLSQYSCARI--S------KGGTVQVRFQPRLGLLLAAASE-----NVVSIFDVETDRLTHSFKG-HSTEI---H 680 (786)
Q Consensus 622 ----wDl~~~~~~~~--~------~~~i~~i~~sp~g~~Ll~gs~d-----g~I~iwD~~t~~~i~~l~~-h~~~I---~ 680 (786)
+|+.+++.... . ..-+..+.|.+++..|++.-.+ ..+.++|..++.....+.. ....| .
T Consensus 159 ~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~ 238 (353)
T PF00930_consen 159 SLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYD 238 (353)
T ss_dssp EEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSS
T ss_pred EEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeec
Confidence 34433332111 0 0124567788888844444332 2477788877644332221 23333 2
Q ss_pred EEEEc-CCCCEEEE-EeCC---eEEEEECCCCeeEEEEccCCCceEE-EEEeCCCCEEEEEECC-----CeEEEEECC-C
Q 044075 681 SVCWD-TNGEYLAS-VSQD---SVRVWSLASGECIHELSSSGNKFHS-CIFHPSYPTLMVIGGY-----QSLELWNMA-E 748 (786)
Q Consensus 681 sv~~s-pdg~~Las-gs~D---~I~vwDl~s~~~i~~l~~~~~~I~s-v~fspdg~~L~sgs~d-----g~I~IwDl~-~ 748 (786)
.+.|. +++..++. ...+ .|.+++...+.. ..+....-.|.. +.++++++.|+..+.. ..|+.-++. .
T Consensus 239 ~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~-~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~ 317 (353)
T PF00930_consen 239 PPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKP-RQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSG 317 (353)
T ss_dssp EEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEE-EESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTET
T ss_pred ccccccCCCCEEEEEEEcCCCcEEEEEcccccce-eccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCC
Confidence 45554 66554443 3343 688888887763 355555566755 6788888777655543 267777888 7
Q ss_pred CeEEEEcccCCCeEEEEEcCCCCEEEEEe
Q 044075 749 NKCMTIAAHDCVISALAQSPVTGMVASAS 777 (786)
Q Consensus 749 ~~~~~~~~h~~~V~slafspdg~~LaSgs 777 (786)
+....+.........+.|||++++++-.+
T Consensus 318 ~~~~~LT~~~~~~~~~~~Spdg~y~v~~~ 346 (353)
T PF00930_consen 318 GEPKCLTCEDGDHYSASFSPDGKYYVDTY 346 (353)
T ss_dssp TEEEESSTTSSTTEEEEE-TTSSEEEEEE
T ss_pred CCeEeccCCCCCceEEEECCCCCEEEEEE
Confidence 77777765555447999999999776544
No 313
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.50 E-value=2.7e-06 Score=90.89 Aligned_cols=158 Identities=15% Similarity=0.180 Sum_probs=106.0
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCee----eeecCCCCCCeEEEEEccCCCEEEEE---eCCCcEEEEcCCCC
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQT----ECTPDDHNHIITDVRFRPNSTQLATS---SFDKTVRIWDAAKP 583 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~----~~~l~~h~~~V~sl~fspdg~~Lasg---s~Dg~I~VWdl~s~ 583 (786)
.+..+.+++.+++||++..+....++++..... ..... -...-+.+.|..+...+.++ +....+.+|....
T Consensus 64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~- 141 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS- 141 (390)
T ss_pred cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeecccc-
Confidence 345566778888888888777776776654322 22221 12223445555544444444 4445566666554
Q ss_pred cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe----ecCCeEEEEEeCCCCEEEEEECCCeEE
Q 044075 584 NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI----SKGGTVQVRFQPRLGLLLAAASENVVS 659 (786)
Q Consensus 584 ~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~----~~~~i~~i~~sp~g~~Ll~gs~dg~I~ 659 (786)
.+.....+|-+.++.++|+||+.+++ +++.|..|++-.......+.. ++.-+..++.-++ ..|++++.|++|+
T Consensus 142 -~~~~~~lGhvSml~dVavS~D~~~Ii-taDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr 218 (390)
T KOG3914|consen 142 -GRCEPILGHVSMLLDVAVSPDDQFII-TADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLR 218 (390)
T ss_pred -cCcchhhhhhhhhheeeecCCCCEEE-EecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEE
Confidence 34667789999999999999987555 999999999987765443332 3344566666554 4589999999999
Q ss_pred EEEcCCCcEEEEEe
Q 044075 660 IFDVETDRLTHSFK 673 (786)
Q Consensus 660 iwD~~t~~~i~~l~ 673 (786)
+||+++++.+..+.
T Consensus 219 ~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 219 LWDITSGKLLDTCD 232 (390)
T ss_pred EEecccCCcccccc
Confidence 99999998886664
No 314
>PF08513 LisH: LisH; InterPro: IPR013720 The LisH motif is found in a large number of eukaryotic proteins, from metazoa, fungi and plants that have a wide range of functions. The recently solved structure of the LisH domain in the N-terminal region of LIS1 depicted it as a novel dimerization motif, and that other structural elements are likely to play an important role in dimerisation [, , ]. The LisH (lis homology) domain mediates protein dimerisation and tetramerisation. The LisH domain is found in Sif2, a component of the Set3 complex which is responsible for repressing meiotic genes. It has been shown that the LisH domain helps mediate interaction with components of the Set3 complex []. ; PDB: 2XTE_L 2XTC_B 2XTD_A 1UUJ_B.
Probab=98.49 E-value=1.3e-07 Score=63.06 Aligned_cols=27 Identities=44% Similarity=0.712 Sum_probs=24.5
Q ss_pred HhHHHHHHHHhhcCCcHHHHHHHHhcC
Q 044075 12 KMLDVYIYDYLVKKKLHNTAKSFMTEG 38 (786)
Q Consensus 12 ~~l~~yiydy~~k~~~~~~a~~~~~e~ 38 (786)
+.||.+|||||+++|+.+||++|.+|+
T Consensus 1 ~~Ln~lI~~YL~~~Gy~~tA~~f~~Ea 27 (27)
T PF08513_consen 1 EELNQLIYDYLVENGYKETAKAFAKEA 27 (27)
T ss_dssp HHHHHHHHHHHHHCT-HHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCcHHHHHHHHhcC
Confidence 579999999999999999999999985
No 315
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.44 E-value=3.3e-05 Score=87.85 Aligned_cols=268 Identities=11% Similarity=0.129 Sum_probs=159.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec-CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP-DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC 586 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l-~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~ 586 (786)
|...|.--+++..+++++.|+.-|.|++|+-..++....- .+..+.+..++.+++..++|.|+..|.|.|+-+......
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~ 111 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR 111 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence 4445555566677899999999999999998766554333 234456667778888888899999999999987663311
Q ss_pred e-----eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe-------eeEeecCCeEEEEEeCCCCEEEEEEC
Q 044075 587 L-----QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS-------CARISKGGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 587 ~-----~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~-------~~~~~~~~i~~i~~sp~g~~Ll~gs~ 654 (786)
. ..-..|...|++++|++++..++ +|+..|.|.+-.++... .+....+.|..+.+. ..+|++++.
T Consensus 112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~y-sGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~--q~~LLVStl 188 (726)
T KOG3621|consen 112 DLDYVTPCDKSHKCRVTALEWSKNGMKLY-SGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL--QSYLLVSTL 188 (726)
T ss_pred cceeeccccccCCceEEEEEecccccEEe-ecCCCceEEEEEechhhhhccccceeeccCcceEEeecc--cceehHhhh
Confidence 1 11224788999999999998877 99999999998887621 122223445555443 234444333
Q ss_pred CCeEEEEEcCCCcEEEEEe-c-CCC-CEEEEEEcCC----CCEEEEEeCCeEEEEECC-CCeeEEEEccC----------
Q 044075 655 ENVVSIFDVETDRLTHSFK-G-HST-EIHSVCWDTN----GEYLASVSQDSVRVWSLA-SGECIHELSSS---------- 716 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l~-~-h~~-~I~sv~~spd----g~~Lasgs~D~I~vwDl~-s~~~i~~l~~~---------- 716 (786)
- ...+++.+.++. ..+- . ..+ .-...||-|. ..-++.|+.-..|+|..+ .|+.+.+....
T Consensus 189 ~-r~~Lc~tE~eti-~QIG~k~R~~~~~~GACF~~g~~~~q~~~IycaRPG~RlWead~~G~V~~Thqfk~ala~~p~p~ 266 (726)
T KOG3621|consen 189 T-RCILCQTEAETI-TQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCARPGLRLWEADFAGEVIKTHQFKDALARPPAPE 266 (726)
T ss_pred h-hhheeecchhHH-HHhcCCCcCCccccceEEeeccccCCCceEEEecCCCceEEeecceeEEEeeehhhhhccCCCCc
Confidence 2 223444443321 1111 0 111 1345566554 344555655567888765 24444332110
Q ss_pred ---CC-----------c-----eEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEe
Q 044075 717 ---GN-----------K-----FHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASAS 777 (786)
Q Consensus 717 ---~~-----------~-----I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs 777 (786)
.. . ...+.+- .+..+++-+.-| |+|+|+.+...+........|.+++.+ ++-|+.-.
T Consensus 267 i~~~s~esp~~~~~~~~~q~ls~~k~~~l-~~~~vLa~te~G-iyv~d~~~~~v~l~se~~~DI~dVs~~--~neiFvL~ 342 (726)
T KOG3621|consen 267 IPIRSLESPNQRSLPSGTQHLSLSKSSTL-HSDRVLAWTEVG-IYVFDSNNSQVYLWSEGGHDILDVSHC--GNEIFVLN 342 (726)
T ss_pred ccCCCcCCccccCCCCCccccccceeEEe-ecceEEEeecce-EEEEEeccceEEEeecCCCceeEEeec--CceEEEEe
Confidence 00 0 0111111 122455555555 999999888877666556667777655 55555556
Q ss_pred CCCcEEE
Q 044075 778 HDKSVKI 784 (786)
Q Consensus 778 ~DG~I~I 784 (786)
.||.+++
T Consensus 343 ~d~~l~~ 349 (726)
T KOG3621|consen 343 LDRGLKV 349 (726)
T ss_pred cCCceeE
Confidence 6665544
No 316
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.43 E-value=2.3e-05 Score=88.69 Aligned_cols=216 Identities=15% Similarity=0.201 Sum_probs=123.6
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee
Q 044075 550 HNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC 629 (786)
Q Consensus 550 h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~ 629 (786)
.......+.++|+++++++++ ||...|+...... ... .+.-..++|.+.+. +++-...+.|.++.--+.+.
T Consensus 31 ~~~~p~~ls~npngr~v~V~g-~geY~iyt~~~~r--~k~----~G~g~~~vw~~~n~--yAv~~~~~~I~I~kn~~~~~ 101 (443)
T PF04053_consen 31 CEIYPQSLSHNPNGRFVLVCG-DGEYEIYTALAWR--NKA----FGSGLSFVWSSRNR--YAVLESSSTIKIYKNFKNEV 101 (443)
T ss_dssp -SS--SEEEE-TTSSEEEEEE-TTEEEEEETTTTE--EEE----EEE-SEEEE-TSSE--EEEE-TTS-EEEEETTEE-T
T ss_pred CCcCCeeEEECCCCCEEEEEc-CCEEEEEEccCCc--ccc----cCceeEEEEecCcc--EEEEECCCeEEEEEcCcccc
Confidence 344578899999999988855 6777788743322 111 23456788887443 44666688899963222222
Q ss_pred eEeecCC--eEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCC
Q 044075 630 ARISKGG--TVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASG 707 (786)
Q Consensus 630 ~~~~~~~--i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~ 707 (786)
...+... +..+-. |..|++.+. +.|.+||+.+++.++++... .|..|.|++++++++..+.+.+.|++....
T Consensus 102 ~k~i~~~~~~~~If~---G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~~i~il~~~~~ 175 (443)
T PF04053_consen 102 VKSIKLPFSVEKIFG---GNLLGVKSS-DFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKDSIYILKYNLE 175 (443)
T ss_dssp T-----SS-EEEEE----SSSEEEEET-TEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S-SEEEEEE-HH
T ss_pred ceEEcCCcccceEEc---CcEEEEECC-CCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCCeEEEEEecch
Confidence 2222222 222222 565555544 58999999999999999843 389999999999999999987777765433
Q ss_pred -----------eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEE
Q 044075 708 -----------ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 708 -----------~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSg 776 (786)
..+..+..-...|.+.+|..+ .++..+.. .|+. +..|....+..-+.++.=+...+..+.|+..
T Consensus 176 ~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkY--l~~Ge~~~i~~ld~~~yllgy~~~~~~ly~~ 250 (443)
T PF04053_consen 176 AVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN-HLKY--LVNGETGIIAHLDKPLYLLGYLPKENRLYLI 250 (443)
T ss_dssp HHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEE--EETTEEEEEEE-SS--EEEEEETTTTEEEEE
T ss_pred hcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEE--EEcCCcceEEEcCCceEEEEEEccCCEEEEE
Confidence 123333322578889999877 55555555 7766 5667766666667788888888877889999
Q ss_pred eCCCcEEEe
Q 044075 777 SHDKSVKIW 785 (786)
Q Consensus 777 s~DG~I~IW 785 (786)
..|+.|..+
T Consensus 251 Dr~~~v~~~ 259 (443)
T PF04053_consen 251 DRDGNVISY 259 (443)
T ss_dssp -TT--EEEE
T ss_pred ECCCCEEEE
Confidence 999888765
No 317
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.39 E-value=4.6e-05 Score=87.65 Aligned_cols=222 Identities=13% Similarity=0.105 Sum_probs=134.0
Q ss_pred CCCEEEEEEC-CCeEEEEEcCCCeeeeecCC-CCCCeEEEEE-------------------ccCCCEEEE-EeCCCcEEE
Q 044075 520 DGKLLASAGH-DKKVVVWNMENFQTECTPDD-HNHIITDVRF-------------------RPNSTQLAT-SSFDKTVRI 577 (786)
Q Consensus 520 dg~~Lasgs~-Dg~V~IWdl~t~~~~~~l~~-h~~~V~sl~f-------------------spdg~~Las-gs~Dg~I~V 577 (786)
||++|+.-.. +..|-..+++..++...+.- ....+..++| .+||+.+.. .-..+.+.+
T Consensus 140 dGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSv 219 (635)
T PRK02888 140 DGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTA 219 (635)
T ss_pred ceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEE
Confidence 7888888764 45566667766555444321 1122333333 334443322 223455667
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEc---CCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEEC
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCD---GNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs---~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~ 654 (786)
.|.++.+.......+ .....++++|++..+++++. ...++...+.........+.-.. .-.+.++|++..+ .
T Consensus 220 ID~etmeV~~qV~Vd--gnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~-iea~vkdGK~~~V--~ 294 (635)
T PRK02888 220 VDAETMEVAWQVMVD--GNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIAR-IEEAVKAGKFKTI--G 294 (635)
T ss_pred EECccceEEEEEEeC--CCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHH-HHHhhhCCCEEEE--C
Confidence 777665432222222 24466788899998887763 22334444433222111111000 0133457777665 3
Q ss_pred CCeEEEEEcCC-----CcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCee------------EEEEcc
Q 044075 655 ENVVSIFDVET-----DRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGEC------------IHELSS 715 (786)
Q Consensus 655 dg~I~iwD~~t-----~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~------------i~~l~~ 715 (786)
++.|.++|.++ .+.+..+. -......|.++|||+++++++.- +|.|+|+.+.+. +.+...
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev 373 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL 373 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc
Confidence 67899999998 34555554 56667899999999999888764 899999987542 333333
Q ss_pred CCCceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 716 SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 716 ~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
+..-...+|.++|....+..-|..|..||+..
T Consensus 374 -GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 374 -GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred -CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 23334568899998888888899999999876
No 318
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.38 E-value=9.7e-07 Score=92.24 Aligned_cols=157 Identities=15% Similarity=0.259 Sum_probs=120.0
Q ss_pred EEEEcCC--CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCC----ccee
Q 044075 514 CCHFSSD--GKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKP----NFCL 587 (786)
Q Consensus 514 ~lafSpd--g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~----~~~~ 587 (786)
.|+|+-+ |-. ++.+.+-.|-|-|++++... .+. ..+.|.++.|.-.+++++.|+..|.|.++|++.. ..+.
T Consensus 216 ~CawSlni~gyh-fs~G~sqqv~L~nvetg~~q-sf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a 292 (425)
T KOG2695|consen 216 SCAWSLNIMGYH-FSVGLSQQVLLTNVETGHQQ-SFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCA 292 (425)
T ss_pred hhhhhhccceee-ecccccceeEEEEeeccccc-ccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcce
Confidence 3466542 334 44455777889999886543 332 5677999999988999999999999999999875 3333
Q ss_pred eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee---eEeecCCeEEE-----EEeCCCCEEEEEECCCeEE
Q 044075 588 QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC---ARISKGGTVQV-----RFQPRLGLLLAAASENVVS 659 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~---~~~~~~~i~~i-----~~sp~g~~Ll~gs~dg~I~ 659 (786)
..+ -|.+.|+++.........+.+.+-+|+|++||++.-++ +....+++... .+++..+.+++++.|...+
T Consensus 293 ~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytR 371 (425)
T KOG2695|consen 293 QRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTR 371 (425)
T ss_pred EEE-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEE
Confidence 333 48899999988773444555788899999999998777 77777777654 3567778999999999999
Q ss_pred EEEcCCCcEEEEEec
Q 044075 660 IFDVETDRLTHSFKG 674 (786)
Q Consensus 660 iwD~~t~~~i~~l~~ 674 (786)
||.++.+.++.++..
T Consensus 372 iWsl~~ghLl~tipf 386 (425)
T KOG2695|consen 372 IWSLDSGHLLCTIPF 386 (425)
T ss_pred EEecccCceeeccCC
Confidence 999999998887764
No 319
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.38 E-value=1.2e-06 Score=63.75 Aligned_cols=39 Identities=33% Similarity=0.532 Sum_probs=37.0
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWN 537 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWd 537 (786)
++++.++++|.+.|++|+|+|++.+|++|+.|+.|+|||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 467889999999999999999999999999999999997
No 320
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.36 E-value=9.6e-05 Score=85.72 Aligned_cols=200 Identities=13% Similarity=0.157 Sum_probs=138.0
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCC-eEEEEEccCCCEEEEEeCCC-----cEEEEcCCCCc
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHI-ITDVRFRPNSTQLATSSFDK-----TVRIWDAAKPN 584 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~-V~sl~fspdg~~Lasgs~Dg-----~I~VWdl~s~~ 584 (786)
.|+| |++.+..+|.|+.+|.|.+.+ ...+.+..+..+... |..+....+..+|++.+.|+ .|+||+++.-+
T Consensus 27 ~isc--~~s~~~~vvigt~~G~V~~Ln-~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~ 103 (933)
T KOG2114|consen 27 AISC--CSSSTGSVVIGTADGRVVILN-SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVD 103 (933)
T ss_pred ceeE--EcCCCceEEEeeccccEEEec-ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccC
Confidence 5555 567788999999999998887 345555777777776 55554444446888877765 48999986431
Q ss_pred -----cee---eeec----CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC--C--Ce---eeEeecCCeEEEEEeCC
Q 044075 585 -----FCL---QTYT----GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS--Q--YS---CARISKGGTVQVRFQPR 645 (786)
Q Consensus 585 -----~~~---~~~~----~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~--~--~~---~~~~~~~~i~~i~~sp~ 645 (786)
.++ +.+. ....++.+++.+.+ -..++.|-.+|.|.++.-+ . +. .....+.+|+.+.+..+
T Consensus 104 ~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~-l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d 182 (933)
T KOG2114|consen 104 KNNSPQCLYEHRIFTIKNPTNPSPASSLAVSED-LKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSD 182 (933)
T ss_pred CCCCcceeeeeeeeccCCCCCCCcceEEEEEcc-ccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecC
Confidence 122 2221 13467888999877 4455678889999988532 1 11 12233478999999888
Q ss_pred CCEEEEEECCCeEEEEEcCCCcE-EEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEc
Q 044075 646 LGLLLAAASENVVSIFDVETDRL-THSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELS 714 (786)
Q Consensus 646 g~~Ll~gs~dg~I~iwD~~t~~~-i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~ 714 (786)
+..++.+..-..|.+|.+....+ ...+..|+..++|..+++...-|++++...|.+||.........+.
T Consensus 183 ~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 183 GKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFYDSDGRGPCFAFE 252 (933)
T ss_pred CceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecCceEEEEcCCCcceeeeec
Confidence 88744444446788888885543 4447778899999999876665888887899999998766666665
No 321
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.34 E-value=1.4e-06 Score=91.13 Aligned_cols=156 Identities=11% Similarity=0.195 Sum_probs=119.5
Q ss_pred EEEcCCCcEEEEeCCCCeeeEe-ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC-----cEEEEEecCCCCEEEEEE
Q 044075 611 CSCDGNSEIRFWNLSQYSCARI-SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETD-----RLTHSFKGHSTEIHSVCW 684 (786)
Q Consensus 611 ~sgs~Dg~I~iwDl~~~~~~~~-~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~-----~~i~~l~~h~~~I~sv~~ 684 (786)
++.+.+-.|-+-|++++..... .++.+.+..|...+..++.|+..|.|.++|++.+ .+...+. |.+.|+++..
T Consensus 228 fs~G~sqqv~L~nvetg~~qsf~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq~ 306 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQSFQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQI 306 (425)
T ss_pred ecccccceeEEEEeecccccccccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhhh
Confidence 3566677888888887654332 4567778888888999999999999999999975 3455555 9999999987
Q ss_pred cC-CCCEEEEEeCC-eEEEEECCCCee---EEEEccCCCceEE--EEEeCCCCEEEEEECCCeEEEEECCCCeEEEEccc
Q 044075 685 DT-NGEYLASVSQD-SVRVWSLASGEC---IHELSSSGNKFHS--CIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAH 757 (786)
Q Consensus 685 sp-dg~~Lasgs~D-~I~vwDl~s~~~---i~~l~~~~~~I~s--v~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h 757 (786)
-. ++.+|++.+.+ +|++||.+.-++ +..+.+|-+.-.- +-+++....+++++.|...+||.++.+..+.....
T Consensus 307 Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf 386 (425)
T KOG2695|consen 307 LQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPF 386 (425)
T ss_pred hccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCC
Confidence 66 77788777777 999999998777 8888888554333 34566778899999999999999999988744332
Q ss_pred -----CCCeEEEEEc
Q 044075 758 -----DCVISALAQS 767 (786)
Q Consensus 758 -----~~~V~slafs 767 (786)
+..+.+++|.
T Consensus 387 ~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 387 PYSASEVDIPSVAFD 401 (425)
T ss_pred CCccccccccceehh
Confidence 3345666665
No 322
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=98.34 E-value=2.3e-05 Score=89.98 Aligned_cols=260 Identities=13% Similarity=0.111 Sum_probs=158.3
Q ss_pred CeEEEEEcCCCCEEEEEE----CCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce
Q 044075 511 KVTCCHFSSDGKLLASAG----HDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC 586 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs----~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~ 586 (786)
.-+-+.|+|...+||+++ ..|.|.||- +++++.....- .-.++++||+|..-.|+.|-.-|.+.+|...+.+ .
T Consensus 17 vsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~-P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e-~ 93 (1416)
T KOG3617|consen 17 VSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTY-PVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE-T 93 (1416)
T ss_pred cccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccccc-ceehhhhccChHHHHHhhccccceeEEEecCCce-e
Confidence 334467888888888876 468898884 56665443321 2235779999998889999999999999988765 3
Q ss_pred eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE----------------eec----------------
Q 044075 587 LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR----------------ISK---------------- 634 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~----------------~~~---------------- 634 (786)
......|..+|..+.|+++|+.++ +++.-|.|.+|.......+. .+.
T Consensus 94 htv~~th~a~i~~l~wS~~G~~l~-t~d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaV 172 (1416)
T KOG3617|consen 94 HTVVETHPAPIQGLDWSHDGTVLM-TLDNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAV 172 (1416)
T ss_pred eeeccCCCCCceeEEecCCCCeEE-EcCCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhhhhc
Confidence 445567999999999999998776 99999999999875211000 000
Q ss_pred -CCeEEEE-----------------EeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC
Q 044075 635 -GGTVQVR-----------------FQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ 696 (786)
Q Consensus 635 -~~i~~i~-----------------~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~ 696 (786)
+....+. -.|+|..|++++.+|+|+..|-.. +.....+. .+. ..+-|.+...-+++.-+
T Consensus 173 tgDe~alD~~fnwk~~~a~rs~~ksgv~~g~~F~~~~~~GtVyyvdq~g-~~~~V~k~-dS~-vQmLf~~~~eai~~i~e 249 (1416)
T KOG3617|consen 173 TGDESALDEPFNWKESLAERSDEKSGVPKGTEFLFAGKSGTVYYVDQNG-RQRTVHKL-DSE-VQMLFMGYCEAISIIIE 249 (1416)
T ss_pred cCchhhhcccccCccchhhccccccCCCCCcEEEEEcCCceEEEEcCCC-cEEEEEEc-cch-HHHHHhcccceEEEEee
Confidence 0000000 124566788888888888877543 22222221 111 11223333333333333
Q ss_pred C-eEEEEECC-CCe---------------e---------EEEE-------ccCCCceEEEEEeCCCCEEEEEECCCeEEE
Q 044075 697 D-SVRVWSLA-SGE---------------C---------IHEL-------SSSGNKFHSCIFHPSYPTLMVIGGYQSLEL 743 (786)
Q Consensus 697 D-~I~vwDl~-s~~---------------~---------i~~l-------~~~~~~I~sv~fspdg~~L~sgs~dg~I~I 743 (786)
+ ++.++-+. +|. . -..+ ...+..+.++++...+..|+.|...|.+.+
T Consensus 250 ~lr~~l~~v~~~G~~ee~~~vk~sgk~GgrqGgiA~sEssGvLr~~eKyg~e~ge~~~c~cY~~~~~~l~agt~~gnv~~ 329 (1416)
T KOG3617|consen 250 FLRDCLIFVLAKGTSEERCAVKVSGKLGGRQGGIACSESSGVLRKSEKYGLELGEGILCMCYGEKEIRLWAGTKEGNVTI 329 (1416)
T ss_pred eceeeEEEecCCCchHHhhhhhhccccCCccCccccccccccccCCcchhhhcCCceEEEEEeccceEEEecccCCcEEE
Confidence 3 22222111 110 0 0000 012456899999999999999999999999
Q ss_pred EECCCC--------eEEEE---cccCCCeEEEEEcCCCCEEEEEe
Q 044075 744 WNMAEN--------KCMTI---AAHDCVISALAQSPVTGMVASAS 777 (786)
Q Consensus 744 wDl~~~--------~~~~~---~~h~~~V~slafspdg~~LaSgs 777 (786)
|.-... ....+ ....+.|+.+.|.|-.+.++.-+
T Consensus 330 w~~v~~~f~g~p~~d~w~l~~~~e~~g~I~~i~Wg~~k~~~avn~ 374 (1416)
T KOG3617|consen 330 WLDVNKGFQGDPTIDVWTLNGKRESLGKISLIRWGPIKSTAAVNT 374 (1416)
T ss_pred eeecCccccCCCCcceEEecCchhhccceEEEEeccccchhhhhh
Confidence 953322 11222 23466899999998665544433
No 323
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.33 E-value=0.00085 Score=73.42 Aligned_cols=267 Identities=14% Similarity=0.122 Sum_probs=135.5
Q ss_pred EEcCCCCEEEEEEC-C--CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecC
Q 044075 516 HFSSDGKLLASAGH-D--KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTG 592 (786)
Q Consensus 516 afSpdg~~Lasgs~-D--g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~ 592 (786)
+|.+||+.|+.++. | ..+.+.|+.+++....-.+.........++++++.++-...+..|+..|+.+.+. ...+..
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~-~~vy~~ 120 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEE-RVVYEV 120 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--E-EEEEE-
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcE-EEEEEC
Confidence 56788977666554 4 4577778888877655544333333567778888887766667899999998763 344554
Q ss_pred CCCCeEEEEEecC-CCeEEEEEcC----------------------CCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCC
Q 044075 593 HNNHVMSLDFHPK-KNDLFCSCDG----------------------NSEIRFWNLSQYSCARISK--GGTVQVRFQPRLG 647 (786)
Q Consensus 593 h~~~V~sl~~sp~-g~~ll~sgs~----------------------Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~ 647 (786)
....+-...|..+ +...++.+-. ...|.-.|+.+++...++. ..+..+.|+|...
T Consensus 121 p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~dp 200 (386)
T PF14583_consen 121 PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTDP 200 (386)
T ss_dssp -TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTEE
T ss_pred CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCCC
Confidence 5555555666432 2223322211 2346666777777666555 4457788999887
Q ss_pred EEEEEECCCe-----EEEEEcCC-CcEEEEEecCC--CCEEEEEEcCCCCEEEEEeC-----C-eEEEEECCCCeeEEEE
Q 044075 648 LLLAAASENV-----VSIFDVET-DRLTHSFKGHS--TEIHSVCWDTNGEYLASVSQ-----D-SVRVWSLASGECIHEL 713 (786)
Q Consensus 648 ~Ll~gs~dg~-----I~iwD~~t-~~~i~~l~~h~--~~I~sv~~spdg~~Lasgs~-----D-~I~vwDl~s~~~i~~l 713 (786)
.+++-|.+|- -+||-+++ +...+.+..+. ..+..=-|.+||..|.--+. + .|.-+|+.+++.....
T Consensus 201 ~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~ 280 (386)
T PF14583_consen 201 TLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLM 280 (386)
T ss_dssp EEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEE
T ss_pred CEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEE
Confidence 7777766441 24554433 23333333332 33444578999987765432 3 5777888887654322
Q ss_pred ccCCCceEEEEEeCCCCEEEEEECCC----------------eEEEEECCCCeEEEEcccCC-----------CeEEEEE
Q 044075 714 SSSGNKFHSCIFHPSYPTLMVIGGYQ----------------SLELWNMAENKCMTIAAHDC-----------VISALAQ 766 (786)
Q Consensus 714 ~~~~~~I~sv~fspdg~~L~sgs~dg----------------~I~IwDl~~~~~~~~~~h~~-----------~V~slaf 766 (786)
.. .....+..++++++++-=+.|. -|+++++..+....+..|.. .=..+.|
T Consensus 281 ~~--p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~F 358 (386)
T PF14583_consen 281 EM--PWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSF 358 (386)
T ss_dssp EE---SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE
T ss_pred eC--CceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCcc
Confidence 22 2344566678888665444432 46678888877654444431 2356899
Q ss_pred cCCCCEE-EEEeCCCcEEEe
Q 044075 767 SPVTGMV-ASASHDKSVKIW 785 (786)
Q Consensus 767 spdg~~L-aSgs~DG~I~IW 785 (786)
+||+++| +++...|...||
T Consensus 359 SPDgk~VlF~Sd~~G~~~vY 378 (386)
T PF14583_consen 359 SPDGKWVLFRSDMEGPPAVY 378 (386)
T ss_dssp -TTSSEEEEEE-TTSS-EEE
T ss_pred CCCCCEEEEECCCCCCccEE
Confidence 9999955 556667777665
No 324
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.33 E-value=0.00081 Score=76.18 Aligned_cols=239 Identities=14% Similarity=0.139 Sum_probs=138.0
Q ss_pred eEEEEEcCCCCEEEEE-ECCC----eEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCC-----------cE
Q 044075 512 VTCCHFSSDGKLLASA-GHDK----KVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDK-----------TV 575 (786)
Q Consensus 512 V~~lafSpdg~~Lasg-s~Dg----~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg-----------~I 575 (786)
+..+.+||||++||.+ +..| .|+|+|+++++.+....... ....+.|.++++.|+....+. .|
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v 204 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV 204 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence 4467899999998866 3333 59999999997765431111 123499999988877665443 37
Q ss_pred EEEcCCCCcce-eeeecCCCCC--eEEEEEecCCCeEEEEEcCC---CcEEEEeCCCC-----eeeEeec--CCeEEEEE
Q 044075 576 RIWDAAKPNFC-LQTYTGHNNH--VMSLDFHPKKNDLFCSCDGN---SEIRFWNLSQY-----SCARISK--GGTVQVRF 642 (786)
Q Consensus 576 ~VWdl~s~~~~-~~~~~~h~~~--V~sl~~sp~g~~ll~sgs~D---g~I~iwDl~~~-----~~~~~~~--~~i~~i~~ 642 (786)
+.|++.+.... ...+...... ...+..+++++++++..... ..|++.|+... ....+.. ..+....-
T Consensus 205 ~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~ 284 (414)
T PF02897_consen 205 YRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVD 284 (414)
T ss_dssp EEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEE
T ss_pred EEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEE
Confidence 88888776532 2344433332 56888999999988766544 35888888764 2222222 33333222
Q ss_pred eCCCCEEEEEEC----CCeEEEEEcCCCc---EEEEEecCCCC--EEEEEEcCCCCEEEE-EeCC---eEEEEECCCCee
Q 044075 643 QPRLGLLLAAAS----ENVVSIFDVETDR---LTHSFKGHSTE--IHSVCWDTNGEYLAS-VSQD---SVRVWSLASGEC 709 (786)
Q Consensus 643 sp~g~~Ll~gs~----dg~I~iwD~~t~~---~i~~l~~h~~~--I~sv~~spdg~~Las-gs~D---~I~vwDl~s~~~ 709 (786)
+. +..|++.+. .+.|...++.... ....+..+... +..+.. .+.+|+. ...+ .|+++|+..+..
T Consensus 285 ~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~~~~~~~l~v~~~~~~~~ 361 (414)
T PF02897_consen 285 HH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYRENGSSRLRVYDLDDGKE 361 (414)
T ss_dssp EE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEEEETTEEEEEEEETT-TEE
T ss_pred cc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE--ECCEEEEEEEECCccEEEEEECCCCcE
Confidence 23 444444433 3678888888764 23345556554 444544 4444444 3444 699999994444
Q ss_pred EEEEcc-CCCceEEEEEeCCCCEEEEEECC----CeEEEEECCCCeEEEE
Q 044075 710 IHELSS-SGNKFHSCIFHPSYPTLMVIGGY----QSLELWNMAENKCMTI 754 (786)
Q Consensus 710 i~~l~~-~~~~I~sv~fspdg~~L~sgs~d----g~I~IwDl~~~~~~~~ 754 (786)
...+.. ..+.|..+...+++..+...-.. ..|+.||+.+++...+
T Consensus 362 ~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~~~ 411 (414)
T PF02897_consen 362 SREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELTLL 411 (414)
T ss_dssp EEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEEEE
T ss_pred EeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEEEE
Confidence 444433 34456666656666554433322 4789999999886544
No 325
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.33 E-value=1.7e-05 Score=91.23 Aligned_cols=181 Identities=19% Similarity=0.255 Sum_probs=128.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
..+.++|++++ +++|+.|+.+|.|++++.... . .+...|... ..+|.++++|+.||+|.|..+.+.+.+
T Consensus 38 ~~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~-~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~- 106 (846)
T KOG2066|consen 38 QNDAISCCAVH--DKFFALGTHRGAVYLTTCQGN-P-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEI- 106 (846)
T ss_pred hhhHHHHHHhh--cceeeeccccceEEEEecCCc-c-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccc-
Confidence 35678899988 679999999999999997643 3 444455543 557999999999999999999887642
Q ss_pred eeecCCCCCeEEEEEecC----CCeEEEEEcCCCcEEEEeCCC---Ce--eeEeecCCeEEEEEeCCCCEEEEEECCCeE
Q 044075 588 QTYTGHNNHVMSLDFHPK----KNDLFCSCDGNSEIRFWNLSQ---YS--CARISKGGTVQVRFQPRLGLLLAAASENVV 658 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp~----g~~ll~sgs~Dg~I~iwDl~~---~~--~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I 658 (786)
..+ ....++.+|+++|+ ....+++|+..| +.++.-+- .. ......|.|.+++|.-+ +++-..|--|
T Consensus 107 ~~~-df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~g~---lIAWand~Gv 181 (846)
T KOG2066|consen 107 TQY-DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWRGN---LIAWANDDGV 181 (846)
T ss_pred eeE-ecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEecCc---EEEEecCCCc
Confidence 222 23578999999998 233455888777 77765431 11 23445588899999743 5555566669
Q ss_pred EEEEcCCCcEEEEEecCCCCE------EEEEEcCCCCEEEEEeCCeEEEEECC
Q 044075 659 SIFDVETDRLTHSFKGHSTEI------HSVCWDTNGEYLASVSQDSVRVWSLA 705 (786)
Q Consensus 659 ~iwD~~t~~~i~~l~~h~~~I------~sv~~spdg~~Lasgs~D~I~vwDl~ 705 (786)
+|||+.++..+..+......+ ..+.|.++. .|+.|-.|+|+|..++
T Consensus 182 ~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~-~LVIGW~d~v~i~~I~ 233 (846)
T KOG2066|consen 182 KVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDED-RLVIGWGDSVKICSIK 233 (846)
T ss_pred EEEeccccceeeccCCCCCCCCcccCCCceEecCCC-eEEEecCCeEEEEEEe
Confidence 999999988877766432322 357786654 4556777788888887
No 326
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.32 E-value=0.00011 Score=88.17 Aligned_cols=237 Identities=11% Similarity=0.183 Sum_probs=146.0
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcC----CCCc
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDA----AKPN 584 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl----~s~~ 584 (786)
.+.|.++.|.-+..-++.+..+|.|.+-|.++.... ....-...|.+++|+||+..++..+.++++.+-+- -..+
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~ 146 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEK 146 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhcc
Confidence 367999999999999999999999999988765432 33445678999999999999999988887766432 1111
Q ss_pred ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE---eecCCeEEEEEeCCCCEEEEEEC----C-C
Q 044075 585 FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR---ISKGGTVQVRFQPRLGLLLAAAS----E-N 656 (786)
Q Consensus 585 ~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~---~~~~~i~~i~~sp~g~~Ll~gs~----d-g 656 (786)
. +..-....+....+-|-.....+ -|+ .|.....+....+... ....+-+.|+|--||.++++... + .
T Consensus 147 ~-L~~d~~~~sk~v~VGwGrkeTqf--rgs-~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~R 222 (1265)
T KOG1920|consen 147 P-LDADDERKSKFVNVGWGRKETQF--RGS-EGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTR 222 (1265)
T ss_pred c-cccccccccccceecccccceee--ecc-hhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCce
Confidence 1 10000111223333343222211 111 1222222111111100 12345677999999999888432 3 7
Q ss_pred eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCC---CeeEEEEccCCCceEEEEEeCCC
Q 044075 657 VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLAS---GECIHELSSSGNKFHSCIFHPSY 729 (786)
Q Consensus 657 ~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s---~~~i~~l~~~~~~I~sv~fspdg 729 (786)
.|+|||.+ +.+-..-......-.+++|-|.|.++++...+ .|.+|.-.. ++....+.....+|..++|+.++
T Consensus 223 kirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~s 301 (1265)
T KOG1920|consen 223 KIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNS 301 (1265)
T ss_pred eEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCC
Confidence 89999988 43332222233344689999999999886432 688887442 22222232333458999999999
Q ss_pred CEEEEE---ECCCeEEEEECCCCeE
Q 044075 730 PTLMVI---GGYQSLELWNMAENKC 751 (786)
Q Consensus 730 ~~L~sg---s~dg~I~IwDl~~~~~ 751 (786)
..|++. .....|++|-+.+...
T Consensus 302 diLAv~~~~~e~~~v~lwt~~NyhW 326 (1265)
T KOG1920|consen 302 DILAVVTSNLENSLVQLWTTGNYHW 326 (1265)
T ss_pred CceeeeecccccceEEEEEecCeEE
Confidence 988883 3344699998887653
No 327
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.29 E-value=0.00029 Score=81.63 Aligned_cols=255 Identities=10% Similarity=0.119 Sum_probs=150.1
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCCC------CeE--EEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecC
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHNH------IIT--DVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTG 592 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~------~V~--sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~ 592 (786)
+..+++++.++.|...|..+++.+-.+..... .+. .+... ++..++.++.++.|+.+|.++++. +-.+..
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~-~W~~~~ 138 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQ-VWKFGN 138 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCE-eeeecC
Confidence 44677777889999999999988776643322 110 11111 225788888999999999999874 333222
Q ss_pred CCC-----Ce-EEEEEecCCCeEEEEE--------cCCCcEEEEeCCCCeeeEeecCCe---------------------
Q 044075 593 HNN-----HV-MSLDFHPKKNDLFCSC--------DGNSEIRFWNLSQYSCARISKGGT--------------------- 637 (786)
Q Consensus 593 h~~-----~V-~sl~~sp~g~~ll~sg--------s~Dg~I~iwDl~~~~~~~~~~~~i--------------------- 637 (786)
... .+ .+..+. +..+++.. +.++.|..+|..+++.+-......
T Consensus 139 ~~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~ 216 (488)
T cd00216 139 NDQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGG 216 (488)
T ss_pred CCCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCC
Confidence 111 01 112222 23333222 236789999999887665443110
Q ss_pred ---EEEEEeCCCCEEEEEECCC------------------eEEEEEcCCCcEEEEEec--CCCC---E-EEEEEc----C
Q 044075 638 ---VQVRFQPRLGLLLAAASEN------------------VVSIFDVETDRLTHSFKG--HSTE---I-HSVCWD----T 686 (786)
Q Consensus 638 ---~~i~~sp~g~~Ll~gs~dg------------------~I~iwD~~t~~~i~~l~~--h~~~---I-~sv~~s----p 686 (786)
....+.+.+..+++++.++ .|.-+|.++++.+..+.. |... . ....+. -
T Consensus 217 ~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~ 296 (488)
T cd00216 217 TSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPK 296 (488)
T ss_pred CccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEecccc
Confidence 1234455667888887665 799999999999888753 2110 0 001111 2
Q ss_pred CCC---EEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEE------------------ECCCeEEEE
Q 044075 687 NGE---YLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVI------------------GGYQSLELW 744 (786)
Q Consensus 687 dg~---~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sg------------------s~dg~I~Iw 744 (786)
++. ++++++.+ .+..+|.++|+.+....... ..+..+| ..++++ ..+|.|..+
T Consensus 297 ~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~---~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~Al 371 (488)
T cd00216 297 DGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE---QPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAAL 371 (488)
T ss_pred CCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec---cccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEE
Confidence 343 56667766 89999999999887764321 1123333 233332 235788888
Q ss_pred ECCCCeEEEEcccC---------CCe--EEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 745 NMAENKCMTIAAHD---------CVI--SALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 745 Dl~~~~~~~~~~h~---------~~V--~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|+.+++.+-..... ... ..+.. .+.+|+.++.||.|+.+|
T Consensus 372 D~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~~dG~l~ald 422 (488)
T cd00216 372 DPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGAADGYFRAFD 422 (488)
T ss_pred eCCCCcEeeEeeCCccccccccCCcccCcceEe--cCCeEEEECCCCeEEEEE
Confidence 99998876322211 111 12222 356788888999888764
No 328
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.27 E-value=0.00017 Score=76.60 Aligned_cols=191 Identities=13% Similarity=0.146 Sum_probs=138.8
Q ss_pred CeEEEEEecCCCeEEEEEcCCCc-EEEEeCCCCeeeEeecCCe-----EEEEEeCCCCEEEEEECC-----CeEEEEEcC
Q 044075 596 HVMSLDFHPKKNDLFCSCDGNSE-IRFWNLSQYSCARISKGGT-----VQVRFQPRLGLLLAAASE-----NVVSIFDVE 664 (786)
Q Consensus 596 ~V~sl~~sp~g~~ll~sgs~Dg~-I~iwDl~~~~~~~~~~~~i-----~~i~~sp~g~~Ll~gs~d-----g~I~iwD~~ 664 (786)
....++.+|.....++.+-.-|+ ..+||..++.......... -..+|+++|++|++.-.| |.|-|||..
T Consensus 6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 34568889977777777776665 6789999988776554221 236899999999998653 789999999
Q ss_pred -CCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC------------------C-eEEEEECCCCeeEEEEc----cCCCce
Q 044075 665 -TDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ------------------D-SVRVWSLASGECIHELS----SSGNKF 720 (786)
Q Consensus 665 -t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~------------------D-~I~vwDl~s~~~i~~l~----~~~~~I 720 (786)
+.+.+.++..|.-.-..+.+.|||+.|+++.. + ++.+.|..+|+.+.... .|...|
T Consensus 86 ~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSi 165 (305)
T PF07433_consen 86 RGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSI 165 (305)
T ss_pred CCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccce
Confidence 56888899888888888999999988877642 2 36677888898887643 366789
Q ss_pred EEEEEeCCCCEEEEEECCC-------eEEEEECCCCe-EEE-----EcccCCCeEEEEEcCCCCEEE-EEeCCCcEEEeC
Q 044075 721 HSCIFHPSYPTLMVIGGYQ-------SLELWNMAENK-CMT-----IAAHDCVISALAQSPVTGMVA-SASHDKSVKIWK 786 (786)
Q Consensus 721 ~sv~fspdg~~L~sgs~dg-------~I~IwDl~~~~-~~~-----~~~h~~~V~slafspdg~~La-Sgs~DG~I~IWd 786 (786)
..+++.++|..++..=..+ -|.+++....- .+. ...-...|-+|+++.++.+++ |+-.-|.+.+||
T Consensus 166 RHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d 245 (305)
T PF07433_consen 166 RHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWD 245 (305)
T ss_pred eeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEE
Confidence 9999999988666654443 34455444321 111 123457899999999998764 555678899995
No 329
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=98.27 E-value=0.00058 Score=76.43 Aligned_cols=252 Identities=14% Similarity=0.118 Sum_probs=127.9
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe-------------------------------------------eeeec
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ-------------------------------------------TECTP 547 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~-------------------------------------------~~~~l 547 (786)
.|+++.|.++..-|++|...|.|.||.....+ +...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 58999999998899999999999999754211 00111
Q ss_pred CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee-ecC------CCCCeEEEEEec---C-C---CeEEEEE
Q 044075 548 DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT-YTG------HNNHVMSLDFHP---K-K---NDLFCSC 613 (786)
Q Consensus 548 ~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~-~~~------h~~~V~sl~~sp---~-g---~~ll~sg 613 (786)
....++|++++.+ |-.++++|..+|.+.|.|++.+..+... +.. ....|+++.|.- . + ..++++|
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG 161 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG 161 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence 2346789999997 4558999999999999999877643321 112 235678888852 1 1 1234455
Q ss_pred cCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECC--CeEEEEEcCCCcEEEEEe----cCCCCEEEEEEcCC
Q 044075 614 DGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASE--NVVSIFDVETDRLTHSFK----GHSTEIHSVCWDTN 687 (786)
Q Consensus 614 s~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~d--g~I~iwD~~t~~~i~~l~----~h~~~I~sv~~spd 687 (786)
...|.+.+|.+--. ...-..+.+-. ......+ ..|..+|.++++...... +-...+ ..
T Consensus 162 Tn~G~v~~fkIlp~------~~g~f~v~~~~----~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~------~i 225 (395)
T PF08596_consen 162 TNSGNVLTFKILPS------SNGRFSVQFAG----ATTNHDSPILSIIPINADTGESALATISAMQGLSKGI------SI 225 (395)
T ss_dssp ETTSEEEEEEEEE-------GGG-EEEEEEE----EE--SS----EEEEEETTT--B-B-BHHHHHGGGGT---------
T ss_pred eCCCCEEEEEEecC------CCCceEEEEee----ccccCCCceEEEEEEECCCCCcccCchhHhhccccCC------Cc
Confidence 55677776655210 00001111100 0000011 123334444443221110 000000 01
Q ss_pred CCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEe-----CCCCEEEEEECCCeEEEEECCCCeEEEEc-c----c
Q 044075 688 GEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFH-----PSYPTLMVIGGYQSLELWNMAENKCMTIA-A----H 757 (786)
Q Consensus 688 g~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fs-----pdg~~L~sgs~dg~I~IwDl~~~~~~~~~-~----h 757 (786)
.-+++++++..++|+...+.+..++..........+.+- ..+..|++...+|.|++|.+..-+.+... - +
T Consensus 226 ~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d 305 (395)
T PF08596_consen 226 PGYVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLD 305 (395)
T ss_dssp -EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---
T ss_pred CcEEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccc
Confidence 125777777799999999888776665332333344452 35677889999999999999987765222 1 1
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC
Q 044075 758 DCVISALAQSPVTGMVASASHD 779 (786)
Q Consensus 758 ~~~V~slafspdg~~LaSgs~D 779 (786)
...+....++++|..++-.+..
T Consensus 306 ~~~~~~ssis~~Gdi~~~~gps 327 (395)
T PF08596_consen 306 SRRLSSSSISRNGDIFYWTGPS 327 (395)
T ss_dssp HHHHTT-EE-TTS-EEEE-SSS
T ss_pred cccccccEECCCCCEEEEeCcc
Confidence 2234556778888877665543
No 330
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.22 E-value=0.00021 Score=82.96 Aligned_cols=201 Identities=12% Similarity=0.260 Sum_probs=134.7
Q ss_pred EEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC-----cEEEEeCCCC-----
Q 044075 558 RFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS-----EIRFWNLSQY----- 627 (786)
Q Consensus 558 ~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg-----~I~iwDl~~~----- 627 (786)
+|++.+..++.|+.+|.|.+.+-. -.....+..+...|...-|.-++..++++.+.|+ .|+|||++..
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s--~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s 107 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSS--FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS 107 (933)
T ss_pred EEcCCCceEEEeeccccEEEeccc--ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC
Confidence 466778899999999988887643 2234667777766444445555655555655543 5899998753
Q ss_pred -eee---Eeec-------CCeEEEEEeCCCCEEEEEECCCeEEEEEcCC----CcEEEEEecCCCCEEEEEEcCCCCE-E
Q 044075 628 -SCA---RISK-------GGTVQVRFQPRLGLLLAAASENVVSIFDVET----DRLTHSFKGHSTEIHSVCWDTNGEY-L 691 (786)
Q Consensus 628 -~~~---~~~~-------~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t----~~~i~~l~~h~~~I~sv~~spdg~~-L 691 (786)
.++ +.+. .++.+++++.+-..+++|..+|.|..+.=+- +....-......+|+.+.+..++.. +
T Consensus 108 P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~l 187 (933)
T KOG2114|consen 108 PQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVL 187 (933)
T ss_pred cceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeE
Confidence 233 2211 3457788999989999999999999884221 1111222235679999999998887 5
Q ss_pred EEEeCCeEEEEECCCCe-eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC-eEEEEc-ccCCCe
Q 044075 692 ASVSQDSVRVWSLASGE-CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN-KCMTIA-AHDCVI 761 (786)
Q Consensus 692 asgs~D~I~vwDl~s~~-~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~-~~~~~~-~h~~~V 761 (786)
+++....|.+|.+.... ....+..++..+.|..+++....+++++. ..|.+|+.... .+..+. +|...+
T Consensus 188 Fv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd~~~~cfaf~~g~kk~~ 259 (933)
T KOG2114|consen 188 FVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSDGRGPCFAFEVGEKKEM 259 (933)
T ss_pred EEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcCCCcceeeeecCCCeEEE
Confidence 56666689999988444 24557778888888888876664555554 46999998754 344555 554433
No 331
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.19 E-value=0.0014 Score=74.14 Aligned_cols=87 Identities=10% Similarity=0.151 Sum_probs=69.2
Q ss_pred EEEEECCCCe--eEEEE-ccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEE
Q 044075 699 VRVWSLASGE--CIHEL-SSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVAS 775 (786)
Q Consensus 699 I~vwDl~s~~--~i~~l-~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaS 775 (786)
..+|++...+ ++... ......+.+++++|+...++.|+.||+|.+||...+..... .+.-.++.++|+|+|.+|++
T Consensus 238 ~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-ka~~~P~~iaWHp~gai~~V 316 (545)
T PF11768_consen 238 SCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-KAEFIPTLIAWHPDGAIFVV 316 (545)
T ss_pred EEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-eecccceEEEEcCCCcEEEE
Confidence 4567665443 22111 13467899999999999999999999999999987754433 45567899999999999999
Q ss_pred EeCCCcEEEeC
Q 044075 776 ASHDKSVKIWK 786 (786)
Q Consensus 776 gs~DG~I~IWd 786 (786)
|+.-|.|.+||
T Consensus 317 ~s~qGelQ~FD 327 (545)
T PF11768_consen 317 GSEQGELQCFD 327 (545)
T ss_pred EcCCceEEEEE
Confidence 99999999997
No 332
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.19 E-value=0.00033 Score=80.78 Aligned_cols=178 Identities=10% Similarity=-0.023 Sum_probs=115.1
Q ss_pred ecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECC----CeEEEEEcCCCcEEEEEecCC
Q 044075 603 HPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASE----NVVSIFDVETDRLTHSFKGHS 676 (786)
Q Consensus 603 sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~d----g~I~iwD~~t~~~i~~l~~h~ 676 (786)
.|+|..+..+.-..+.+.+.|..+.+...... +....+.++++++++++.+.+ .++...+..+...+..+....
T Consensus 201 pnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~ 280 (635)
T PRK02888 201 PNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIAR 280 (635)
T ss_pred CCCCCEeecccceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHH
Confidence 34454444343345667777777766544333 444567899999999888742 344444443333222222100
Q ss_pred CCEEEEEEcCCCCEEEEEeCCeEEEEECCC----C-eeEEEEccCCCceEEEEEeCCCCEEEEEEC-CCeEEEEECCCCe
Q 044075 677 TEIHSVCWDTNGEYLASVSQDSVRVWSLAS----G-ECIHELSSSGNKFHSCIFHPSYPTLMVIGG-YQSLELWNMAENK 750 (786)
Q Consensus 677 ~~I~sv~~spdg~~Lasgs~D~I~vwDl~s----~-~~i~~l~~~~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl~~~~ 750 (786)
+ -.+.++|++... ..+.|.++|.++ + +.+..+ .-....+.+.++|||+++++++. +.+|.|+|+.+.+
T Consensus 281 --i--ea~vkdGK~~~V-~gn~V~VID~~t~~~~~~~v~~yI-PVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k 354 (635)
T PRK02888 281 --I--EEAVKAGKFKTI-GGSKVPVVDGRKAANAGSALTRYV-PVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLD 354 (635)
T ss_pred --H--HHhhhCCCEEEE-CCCEEEEEECCccccCCcceEEEE-ECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhh
Confidence 0 133467887776 334899999998 3 444444 34567789999999999888775 6799999998755
Q ss_pred E------------EEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 751 C------------MTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 751 ~------------~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
. .....-...-...+|.++|....|..-|..|..||
T Consensus 355 ~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn 402 (635)
T PRK02888 355 DLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWN 402 (635)
T ss_pred hhhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEe
Confidence 2 11122234455788999999888889999999996
No 333
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.18 E-value=4e-05 Score=88.23 Aligned_cols=180 Identities=13% Similarity=0.179 Sum_probs=126.9
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE
Q 044075 552 HIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR 631 (786)
Q Consensus 552 ~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~ 631 (786)
+.++|++++ ++.|+.|..+|.|++++....- .....|... .-+|. .+++|+.||+|.|..+-+.....
T Consensus 40 D~is~~av~--~~~~~~GtH~g~v~~~~~~~~~---~~~~~~s~~------~~~Ge-y~asCS~DGkv~I~sl~~~~~~~ 107 (846)
T KOG2066|consen 40 DAISCCAVH--DKFFALGTHRGAVYLTTCQGNP---KTNFDHSSS------ILEGE-YVASCSDDGKVVIGSLFTDDEIT 107 (846)
T ss_pred hHHHHHHhh--cceeeeccccceEEEEecCCcc---ccccccccc------ccCCc-eEEEecCCCcEEEeeccCCccce
Confidence 457777776 7789999999999999876431 333344433 33455 55699999999999887765444
Q ss_pred --eecCCeEEEEEeCC-----CCEEEEEECCCeEEEEEcCCC--cEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEE
Q 044075 632 --ISKGGTVQVRFQPR-----LGLLLAAASENVVSIFDVETD--RLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVW 702 (786)
Q Consensus 632 --~~~~~i~~i~~sp~-----g~~Ll~gs~dg~I~iwD~~t~--~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vw 702 (786)
.++..+.+++++|+ .+.+++|+..| +.++.-+-. +....+....++|.+|+|. |++|+-++++.|+||
T Consensus 108 ~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~Gv~vy 184 (846)
T KOG2066|consen 108 QYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDGVKVY 184 (846)
T ss_pred eEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCCcEEE
Confidence 56688899999998 46799999888 777764422 1111345567899999995 778888877799999
Q ss_pred ECCCCeeEEEEccCCCce------EEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 703 SLASGECIHELSSSGNKF------HSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 703 Dl~s~~~i~~l~~~~~~I------~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
|+.++..+..+......+ ..+.|.++.+ |+ .|...+|+|..++.
T Consensus 185 d~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-LV-IGW~d~v~i~~I~~ 234 (846)
T KOG2066|consen 185 DTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDR-LV-IGWGDSVKICSIKK 234 (846)
T ss_pred eccccceeeccCCCCCCCCcccCCCceEecCCCe-EE-EecCCeEEEEEEec
Confidence 999998887776554333 2456665543 33 34444788887773
No 334
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.17 E-value=3.1e-05 Score=89.93 Aligned_cols=179 Identities=18% Similarity=0.281 Sum_probs=137.0
Q ss_pred CCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEE
Q 044075 520 DGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMS 599 (786)
Q Consensus 520 dg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~s 599 (786)
++..++.|+.-..+..+|+.+.+..+...-....|+-++. +++++++|...|+|.+-|..+.+ .++++..|.+.|.+
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~-~iht~~aHs~siSD 222 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFE-TIHTFDAHSGSISD 222 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCc-eeeeeeccccceee
Confidence 3556788888888999999998888777666656766665 58899999999999999999877 68999999999998
Q ss_pred EEEecCCCeEEEEEcC---------CCcEEEEeCCCCeeeEeec--CCeEEEEEeCCC-CEEEEEECCCeEEEEEcCC--
Q 044075 600 LDFHPKKNDLFCSCDG---------NSEIRFWNLSQYSCARISK--GGTVQVRFQPRL-GLLLAAASENVVSIFDVET-- 665 (786)
Q Consensus 600 l~~sp~g~~ll~sgs~---------Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t-- 665 (786)
++.. |+ ++++|+. |..|+|||++..+.+.... ....-+.|+|.- ..+++++..|...+.|..+
T Consensus 223 fDv~--GN-lLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~ls 299 (1118)
T KOG1275|consen 223 FDVQ--GN-LLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLS 299 (1118)
T ss_pred eecc--CC-eEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeeccccccC
Confidence 8876 55 4457754 5568999999877665443 333456777754 4678888889999999432
Q ss_pred -C-cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEEC
Q 044075 666 -D-RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSL 704 (786)
Q Consensus 666 -~-~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl 704 (786)
. .-+..+......+..+++++++..++.+..+ .|.+|.-
T Consensus 300 NP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~ 341 (1118)
T KOG1275|consen 300 NPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD 341 (1118)
T ss_pred CCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence 2 2233344455669999999999999999888 9999973
No 335
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.16 E-value=4.2e-06 Score=60.89 Aligned_cols=39 Identities=31% Similarity=0.494 Sum_probs=36.7
Q ss_pred CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 541 FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 541 ~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
++++.++.+|...|++|+|+|++.+|++++.|++|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 367889999999999999999999999999999999997
No 336
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.13 E-value=0.0037 Score=70.12 Aligned_cols=249 Identities=16% Similarity=0.169 Sum_probs=167.2
Q ss_pred EEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe-CCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEE
Q 044075 533 VVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS-FDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFC 611 (786)
Q Consensus 533 V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~ 611 (786)
+.+++..+......+..+. ....+...+++..+.... ....+.+.+..... .......-...-..+++++.+..+++
T Consensus 13 ~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~-~~~~~~~g~~~p~~i~v~~~~~~vyv 90 (381)
T COG3391 13 VSVINTGTNKVTAAISLGR-GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNT-VTQSLSVGGVYPAGVAVNPAGNKVYV 90 (381)
T ss_pred eEEEeecccEEEEEeecCC-CCceeEEcCccCEEEEEeecCceeeecccccce-eeeeccCCCccccceeeCCCCCeEEE
Confidence 5556655555544444333 456778888885554443 22245555554221 11111111134567888999998888
Q ss_pred EEcCCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEEC---CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcC
Q 044075 612 SCDGNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAAS---ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDT 686 (786)
Q Consensus 612 sgs~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~---dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~sp 686 (786)
....+..|.+.|....+...... .....++++++++.++++.. ++.+.+.|..+.+.+.....-..+ ..++++|
T Consensus 91 ~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p 169 (381)
T COG3391 91 TTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDP 169 (381)
T ss_pred ecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECC
Confidence 88888999999987776665544 35677899999998888877 689999999999888875543344 8999999
Q ss_pred CCCEEEEEeCC--eEEEEECCCCeeEE-E---EccCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCCCeEEEEcc-
Q 044075 687 NGEYLASVSQD--SVRVWSLASGECIH-E---LSSSGNKFHSCIFHPSYPTLMVIGGY---QSLELWNMAENKCMTIAA- 756 (786)
Q Consensus 687 dg~~Lasgs~D--~I~vwDl~s~~~i~-~---l~~~~~~I~sv~fspdg~~L~sgs~d---g~I~IwDl~~~~~~~~~~- 756 (786)
+|..++.+..+ .|.++|........ . .......-..+.+.+++.++++.... +.+.+.|..++.......
T Consensus 170 ~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~ 249 (381)
T COG3391 170 DGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLP 249 (381)
T ss_pred CCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccc
Confidence 99988777633 89999977665553 1 11122344678899999977766554 489999999988775421
Q ss_pred cCC-CeEEEEEcCCCCEEEEEeCC-CcEEE
Q 044075 757 HDC-VISALAQSPVTGMVASASHD-KSVKI 784 (786)
Q Consensus 757 h~~-~V~slafspdg~~LaSgs~D-G~I~I 784 (786)
-.. ....+.++|+|..+++.... +.|.+
T Consensus 250 ~~~~~~~~v~~~p~g~~~yv~~~~~~~V~v 279 (381)
T COG3391 250 VGSGAPRGVAVDPAGKAAYVANSQGGTVSV 279 (381)
T ss_pred cccCCCCceeECCCCCEEEEEecCCCeEEE
Confidence 112 46678899999988777433 44443
No 337
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.12 E-value=0.00036 Score=83.86 Aligned_cols=227 Identities=14% Similarity=0.210 Sum_probs=134.3
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee
Q 044075 551 NHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA 630 (786)
Q Consensus 551 ~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~ 630 (786)
.+.|.++.|.-+.+.++.+..+|.|.+-|..+.. ......-...|.+++|+|+...+. ..+..++|.+-+- ....+
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~--~eivg~vd~GI~aaswS~Dee~l~-liT~~~tll~mT~-~f~~i 143 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLE--LEIVGNVDNGISAASWSPDEELLA-LITGRQTLLFMTK-DFEPI 143 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEcccccc--eeeeeeccCceEEEeecCCCcEEE-EEeCCcEEEEEec-cccch
Confidence 4689999999999999999999999999888765 333334467899999999988655 4444556655332 11111
Q ss_pred Eeec--------CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcE-EEEEecCCCCEEEEEEcCCCCEEEEEe-----C
Q 044075 631 RISK--------GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRL-THSFKGHSTEIHSVCWDTNGEYLASVS-----Q 696 (786)
Q Consensus 631 ~~~~--------~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~-i~~l~~h~~~I~sv~~spdg~~Lasgs-----~ 696 (786)
.... .....+-|-.....| -|+ .|.....+....+. ..... -.+.=+.|+|--||.|+++.. .
T Consensus 144 ~E~~L~~d~~~~sk~v~VGwGrkeTqf-rgs-~gr~~~~~~~~~ek~~~~~~-~~~~~~~IsWRgDg~~fAVs~~~~~~~ 220 (1265)
T KOG1920|consen 144 AEKPLDADDERKSKFVNVGWGRKETQF-RGS-EGRQAARQKIEKEKALEQIE-QDDHKTSISWRGDGEYFAVSFVESETG 220 (1265)
T ss_pred hccccccccccccccceecccccceee-ecc-hhhhcccccccccccccchh-hccCCceEEEccCCcEEEEEEEeccCC
Confidence 1100 111122221111110 000 01111111110000 00001 112235689999999999843 3
Q ss_pred -CeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEEC---CCeEEEEECCCCeE---E-EEcccCCCeEEEEEcC
Q 044075 697 -DSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGG---YQSLELWNMAENKC---M-TIAAHDCVISALAQSP 768 (786)
Q Consensus 697 -D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~---dg~I~IwDl~~~~~---~-~~~~h~~~V~slafsp 768 (786)
..|+|||-+ |..-..-....+--.+++|-|.|..+++... |+.|.+|.-+.-.. . ........|..++|+.
T Consensus 221 ~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns 299 (1265)
T KOG1920|consen 221 TRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNS 299 (1265)
T ss_pred ceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecC
Confidence 279999977 4433333333455678999999998888754 45799997654332 1 2223334499999999
Q ss_pred CCCEEEE---EeCCCcEEEe
Q 044075 769 VTGMVAS---ASHDKSVKIW 785 (786)
Q Consensus 769 dg~~LaS---gs~DG~I~IW 785 (786)
++.+|+. +.....|++|
T Consensus 300 ~sdiLAv~~~~~e~~~v~lw 319 (1265)
T KOG1920|consen 300 NSDILAVVTSNLENSLVQLW 319 (1265)
T ss_pred CCCceeeeecccccceEEEE
Confidence 9999887 4444459998
No 338
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.09 E-value=0.00034 Score=79.02 Aligned_cols=195 Identities=18% Similarity=0.220 Sum_probs=128.1
Q ss_pred CeeeeecCCCCCCeEEEEEccCCCEEEEEeC---C-CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC
Q 044075 541 FQTECTPDDHNHIITDVRFRPNSTQLATSSF---D-KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN 616 (786)
Q Consensus 541 ~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~---D-g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D 616 (786)
+.....+..-...+..-+|+|++..++..+. . ..+.++|+.++...... ...+.-....|+|+|+.++++...|
T Consensus 182 g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~--~~~g~~~~P~fspDG~~l~f~~~rd 259 (425)
T COG0823 182 GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVIL--NFNGNNGAPAFSPDGSKLAFSSSRD 259 (425)
T ss_pred CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceee--ccCCccCCccCCCCCCEEEEEECCC
Confidence 4445555555667888899999887655432 2 35899999887642221 1234445678999999999998888
Q ss_pred Cc--EEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECC-C--eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCC
Q 044075 617 SE--IRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASE-N--VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGE 689 (786)
Q Consensus 617 g~--I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~d-g--~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~ 689 (786)
|. |+++|+......+... +....-.|+|+|++++..+.. | .|.++|.+......... ....-..-.|+|||+
T Consensus 260 g~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~-~~~~~~~p~~SpdG~ 338 (425)
T COG0823 260 GSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTF-SGGGNSNPVWSPDGD 338 (425)
T ss_pred CCccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeec-cCCCCcCccCCCCCC
Confidence 76 5566777766444322 333456799999998888764 3 57888888775533222 222223778999999
Q ss_pred EEEEEeC--C--eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCC
Q 044075 690 YLASVSQ--D--SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ 739 (786)
Q Consensus 690 ~Lasgs~--D--~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg 739 (786)
+|+..+. + .|.+.|+.++..+..+ ........-.|.+++..++..+..+
T Consensus 339 ~i~~~~~~~g~~~i~~~~~~~~~~~~~l-t~~~~~e~ps~~~ng~~i~~~s~~~ 391 (425)
T COG0823 339 KIVFESSSGGQWDIDKNDLASGGKIRIL-TSTYLNESPSWAPNGRMIMFSSGQG 391 (425)
T ss_pred EEEEEeccCCceeeEEeccCCCCcEEEc-cccccCCCCCcCCCCceEEEeccCC
Confidence 9998873 2 4788888776543333 2334444557788888777666543
No 339
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.08 E-value=0.0027 Score=68.34 Aligned_cols=238 Identities=15% Similarity=0.163 Sum_probs=146.1
Q ss_pred EEEEEcCCCCEEEEEE----------CCCeEEEEEcCCCeeeeecCCC---C----CCeEEEEEccCCCEEEEEeC--CC
Q 044075 513 TCCHFSSDGKLLASAG----------HDKKVVVWNMENFQTECTPDDH---N----HIITDVRFRPNSTQLATSSF--DK 573 (786)
Q Consensus 513 ~~lafSpdg~~Lasgs----------~Dg~V~IWdl~t~~~~~~l~~h---~----~~V~sl~fspdg~~Lasgs~--Dg 573 (786)
-.+..+||++.++++. ..-.|.+||..+......+.-. . .....+.++.|++++++... --
T Consensus 39 ~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~ 118 (342)
T PF06433_consen 39 GNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPAT 118 (342)
T ss_dssp EEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSE
T ss_pred CceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCC
Confidence 3466899999988754 3446999999998777654221 1 12234678889988877654 45
Q ss_pred cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC-CCeeeEeec-------CCe-EEEEEeC
Q 044075 574 TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS-QYSCARISK-------GGT-VQVRFQP 644 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~-~~~~~~~~~-------~~i-~~i~~sp 644 (786)
+|.|.|+...+. +..+.- .+ |.-..|.++.-|.+-|.||.+.-..+. .++...... ..+ ..-.+..
T Consensus 119 SVtVVDl~~~kv-v~ei~~-PG---C~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~ 193 (342)
T PF06433_consen 119 SVTVVDLAAKKV-VGEIDT-PG---CWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSR 193 (342)
T ss_dssp EEEEEETTTTEE-EEEEEG-TS---EEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEET
T ss_pred eEEEEECCCCce-eeeecC-CC---EEEEEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceEC
Confidence 688999988764 333331 11 222234444445566779999988887 344332211 111 1223445
Q ss_pred CCCEEEEEECCCeEEEEEcCCCcEE--EEEecC------C----CCEEEEEEcCCCCEEEEEe--------CC---eEEE
Q 044075 645 RLGLLLAAASENVVSIFDVETDRLT--HSFKGH------S----TEIHSVCWDTNGEYLASVS--------QD---SVRV 701 (786)
Q Consensus 645 ~g~~Ll~gs~dg~I~iwD~~t~~~i--~~l~~h------~----~~I~sv~~spdg~~Lasgs--------~D---~I~v 701 (786)
.+..++..+.+|.|+-.|+...... ..+..- . +.-.-+++++....|++-- .+ .|.+
T Consensus 194 ~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv 273 (342)
T PF06433_consen 194 DGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWV 273 (342)
T ss_dssp TTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEE
T ss_pred CCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEE
Confidence 6667777889999999999876432 222211 1 1122367776555444431 12 4999
Q ss_pred EECCCCeeEEEEccCCCceEEEEEeCCCC-EEEEEE-CCCeEEEEECCCCeEEEEcc
Q 044075 702 WSLASGECIHELSSSGNKFHSCIFHPSYP-TLMVIG-GYQSLELWNMAENKCMTIAA 756 (786)
Q Consensus 702 wDl~s~~~i~~l~~~~~~I~sv~fspdg~-~L~sgs-~dg~I~IwDl~~~~~~~~~~ 756 (786)
||+.+++.+.++... .++.++.++.+.+ .|++.+ .++.|.+||..+++.+....
T Consensus 274 ~D~~t~krv~Ri~l~-~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 274 YDLKTHKRVARIPLE-HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp EETTTTEEEEEEEEE-EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred EECCCCeEEEEEeCC-CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence 999999999988753 5677999998775 555555 46899999999998875443
No 340
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.04 E-value=0.00083 Score=76.19 Aligned_cols=223 Identities=11% Similarity=0.118 Sum_probs=122.0
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEE-cCCC
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIW-DAAK 582 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW-dl~s 582 (786)
.+....-....+.++|+|++++++ .||.-.|+.......... +.-...+|.+++ .+|+-...++|.|+ +++.
T Consensus 27 ~lg~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r~k~~-----G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~ 99 (443)
T PF04053_consen 27 ELGSCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWRNKAF-----GSGLSFVWSSRN-RYAVLESSSTIKIYKNFKN 99 (443)
T ss_dssp EEEE-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTEEEEE-----EE-SEEEE-TSS-EEEEE-TTS-EEEEETTEE
T ss_pred cCCCCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCccccc-----CceeEEEEecCc-cEEEEECCCeEEEEEcCcc
Confidence 344455568899999999999985 588888888554444332 234568899844 57777778899996 4432
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC-eEEEEEeCCCCEEEEEECCCeEEEE
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG-TVQVRFQPRLGLLLAAASENVVSIF 661 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~-i~~i~~sp~g~~Ll~gs~dg~I~iw 661 (786)
.. ...+.. ...+..|-. |..++ ..+ ++.|.+||+.+++.++..... +..+.|++++.+++..+.+ .++|+
T Consensus 100 ~~--~k~i~~-~~~~~~If~---G~LL~-~~~-~~~i~~yDw~~~~~i~~i~v~~vk~V~Ws~~g~~val~t~~-~i~il 170 (443)
T PF04053_consen 100 EV--VKSIKL-PFSVEKIFG---GNLLG-VKS-SDFICFYDWETGKLIRRIDVSAVKYVIWSDDGELVALVTKD-SIYIL 170 (443)
T ss_dssp -T--T------SS-EEEEE----SSSEE-EEE-TTEEEEE-TTT--EEEEESS-E-EEEEE-TTSSEEEEE-S--SEEEE
T ss_pred cc--ceEEcC-CcccceEEc---CcEEE-EEC-CCCEEEEEhhHcceeeEEecCCCcEEEEECCCCEEEEEeCC-eEEEE
Confidence 22 112221 112344432 55454 443 448999999999999888865 6999999999999888765 56666
Q ss_pred EcCCC-----------cEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCC
Q 044075 662 DVETD-----------RLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYP 730 (786)
Q Consensus 662 D~~t~-----------~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~ 730 (786)
+.+.. .....+......|.+.+|..+ .|+-.+...|+. +..|+. ..+..-+.++.-+.+.+..+
T Consensus 171 ~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~~lkY--l~~Ge~-~~i~~ld~~~yllgy~~~~~ 245 (443)
T PF04053_consen 171 KYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSNHLKY--LVNGET-GIIAHLDKPLYLLGYLPKEN 245 (443)
T ss_dssp EE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TTEEEE--EETTEE-EEEEE-SS--EEEEEETTTT
T ss_pred EecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCCeEEE--EEcCCc-ceEEEcCCceEEEEEEccCC
Confidence 54432 123333323567999999876 454444446665 333432 22323345677777888777
Q ss_pred EEEEEECCCeEEEEECC
Q 044075 731 TLMVIGGYQSLELWNMA 747 (786)
Q Consensus 731 ~L~sgs~dg~I~IwDl~ 747 (786)
.+++...++.|..+.+.
T Consensus 246 ~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 246 RLYLIDRDGNVISYELD 262 (443)
T ss_dssp EEEEE-TT--EEEEE--
T ss_pred EEEEEECCCCEEEEEEC
Confidence 88888888888877664
No 341
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.01 E-value=0.0022 Score=74.44 Aligned_cols=232 Identities=11% Similarity=0.099 Sum_probs=137.7
Q ss_pred CEEEEEECCCeEEEEEcCCCeeeeecCCCCCC-----eE-EEEEccCCCEEEEEe---------CCCcEEEEcCCCCcce
Q 044075 522 KLLASAGHDKKVVVWNMENFQTECTPDDHNHI-----IT-DVRFRPNSTQLATSS---------FDKTVRIWDAAKPNFC 586 (786)
Q Consensus 522 ~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~-----V~-sl~fspdg~~Lasgs---------~Dg~I~VWdl~s~~~~ 586 (786)
..++.++.++.|+.+|.++++.+-.+...... |. ...+. +..+++++ .++.|..+|..+++..
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~ 188 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLL 188 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCcee
Confidence 57778888999999999999998777543321 11 11222 24455554 3678899999888743
Q ss_pred eeeecCCC-------------------CCeE-EEEEecCCCeEEEEEcCCC------------------cEEEEeCCCCe
Q 044075 587 LQTYTGHN-------------------NHVM-SLDFHPKKNDLFCSCDGNS------------------EIRFWNLSQYS 628 (786)
Q Consensus 587 ~~~~~~h~-------------------~~V~-sl~~sp~g~~ll~sgs~Dg------------------~I~iwDl~~~~ 628 (786)
-....... ..|. +..+.+.+..++ .++.++ .|..+|+.+++
T Consensus 189 W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~-vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~ 267 (488)
T cd00216 189 WRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVY-VGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGK 267 (488)
T ss_pred eEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEE-EECCCCCCCccCCccCCCCCCceeeEEEEcCCCCC
Confidence 22211111 0111 233444445454 444343 79999999988
Q ss_pred eeEeecCCe---------EEEEEe----CCCC---EEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEE
Q 044075 629 CARISKGGT---------VQVRFQ----PRLG---LLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLA 692 (786)
Q Consensus 629 ~~~~~~~~i---------~~i~~s----p~g~---~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~La 692 (786)
..-.+.... ....+. -++. .+++++.+|.++.+|.++++.+...... ...+..+| ..++
T Consensus 268 ~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~---~~~~~~~~--~~vy 342 (488)
T cd00216 268 VKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV---EQPMAYDP--GLVY 342 (488)
T ss_pred EEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee---ccccccCC--ceEE
Confidence 776543110 001111 1232 5778888999999999999988876521 11223333 2222
Q ss_pred EE------------------eCC-eEEEEECCCCeeEEEEccCC--------CceEEEEEeCCCCEEEEEECCCeEEEEE
Q 044075 693 SV------------------SQD-SVRVWSLASGECIHELSSSG--------NKFHSCIFHPSYPTLMVIGGYQSLELWN 745 (786)
Q Consensus 693 sg------------------s~D-~I~vwDl~s~~~i~~l~~~~--------~~I~sv~fspdg~~L~sgs~dg~I~IwD 745 (786)
.+ ..+ .|.-+|+.+++.+.+..... .+...-.....+..|++++.||.|+.+|
T Consensus 343 v~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald 422 (488)
T cd00216 343 LGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFD 422 (488)
T ss_pred EccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEE
Confidence 21 123 78888999998887765431 1111111122456889999999999999
Q ss_pred CCCCeEEEEcccCCCe
Q 044075 746 MAENKCMTIAAHDCVI 761 (786)
Q Consensus 746 l~~~~~~~~~~h~~~V 761 (786)
..+++.+-.......+
T Consensus 423 ~~tG~~lW~~~~~~~~ 438 (488)
T cd00216 423 ATTGKELWKFRTPSGI 438 (488)
T ss_pred CCCCceeeEEECCCCc
Confidence 9999987444333333
No 342
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.97 E-value=2.9e-06 Score=94.99 Aligned_cols=198 Identities=12% Similarity=0.177 Sum_probs=129.9
Q ss_pred CCCCeEEEEEcCC--CCEEEEEECCCeEEEEEcCCCe--eeeecCCCCCCeEEEEEcc-CCCEEEEEe----CCCcEEEE
Q 044075 508 SSSKVTCCHFSSD--GKLLASAGHDKKVVVWNMENFQ--TECTPDDHNHIITDVRFRP-NSTQLATSS----FDKTVRIW 578 (786)
Q Consensus 508 H~~~V~~lafSpd--g~~Lasgs~Dg~V~IWdl~t~~--~~~~l~~h~~~V~sl~fsp-dg~~Lasgs----~Dg~I~VW 578 (786)
....+.|+++.-+ ..++++|..+|.|.+-.+.... .......|...+++++|++ |.+.||+|- .|..+.||
T Consensus 55 dtqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw 134 (783)
T KOG1008|consen 55 DTQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW 134 (783)
T ss_pred cCCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence 3446888887653 4578999999999999876432 2344567888999999998 566777663 35679999
Q ss_pred cCCCCc----ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe--eeEeecCCeEEEEEeCCCCEEEEE
Q 044075 579 DAAKPN----FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS--CARISKGGTVQVRFQPRLGLLLAA 652 (786)
Q Consensus 579 dl~s~~----~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~--~~~~~~~~i~~i~~sp~g~~Ll~g 652 (786)
|+.+.- .......+......+++|..+ ..++.+|.....+.++|++... +..+-...+..+.+.|-..-.++.
T Consensus 135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd-~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs 213 (783)
T KOG1008|consen 135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRD-TKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCS 213 (783)
T ss_pred ecccccCCCccccccccccccCccccccccC-cchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceec
Confidence 998751 111111223455678999844 5566688888899999998321 112222345566777733334455
Q ss_pred ECCCeEEEEEc-CCC-cEEEEEec----CCCCEEEEEEcCCC-CEEEEEeCC--eEEEEECCC
Q 044075 653 ASENVVSIFDV-ETD-RLTHSFKG----HSTEIHSVCWDTNG-EYLASVSQD--SVRVWSLAS 706 (786)
Q Consensus 653 s~dg~I~iwD~-~t~-~~i~~l~~----h~~~I~sv~~spdg-~~Lasgs~D--~I~vwDl~s 706 (786)
..|+.|.+||. ++- .++..+.. ....+..++|+|.. ..++++..| +|++||+..
T Consensus 214 ~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 214 NSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred cccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 66999999993 332 22222221 22348999999954 356777777 899999863
No 343
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.97 E-value=0.003 Score=67.25 Aligned_cols=212 Identities=12% Similarity=0.113 Sum_probs=125.0
Q ss_pred cCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe--------
Q 044075 561 PNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI-------- 632 (786)
Q Consensus 561 pdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~-------- 632 (786)
..++.|+.|+.+| |.++++........... ...|..+...++-+.+++.+ |+.|+++++........
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLs--d~~l~~~~L~~l~~~~~~~~~~~~~ 79 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLS--DGQLYVYDLDSLEPVSTSAPLAFPK 79 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEc--CCccEEEEchhhccccccccccccc
Confidence 3577899999988 99999843332233322 23499999999888777554 59999999876443331
Q ss_pred -------ec--CCeEEEE--EeCCCCEEEEEECCCeEEEEEcCCC-----cEEEEEecCCCCEEEEEEcCCCCEEEEEeC
Q 044075 633 -------SK--GGTVQVR--FQPRLGLLLAAASENVVSIFDVETD-----RLTHSFKGHSTEIHSVCWDTNGEYLASVSQ 696 (786)
Q Consensus 633 -------~~--~~i~~i~--~sp~g~~Ll~gs~dg~I~iwD~~t~-----~~i~~l~~h~~~I~sv~~spdg~~Lasgs~ 696 (786)
.. .++..++ -...+...++......|.+|..... +..+.+. -...+.+++|. ++.|+.+..
T Consensus 80 ~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~ 156 (275)
T PF00780_consen 80 SRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTS 156 (275)
T ss_pred cccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeC
Confidence 11 2233333 2234455556666678888887653 3455555 45788999998 667888888
Q ss_pred CeEEEEECCCCeeEEEEccCC------------CceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEE
Q 044075 697 DSVRVWSLASGECIHELSSSG------------NKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISA 763 (786)
Q Consensus 697 D~I~vwDl~s~~~i~~l~~~~------------~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~s 763 (786)
+...+.|+.++.....+.... .++..+. .+++.+|++. +..-.+.|....... ....-...+.+
T Consensus 157 ~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~Ll~~--~~~g~fv~~~G~~~r~~~i~W~~~p~~ 233 (275)
T PF00780_consen 157 KGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQ-LSDNEFLLCY--DNIGVFVNKNGEPSRKSTIQWSSAPQS 233 (275)
T ss_pred CceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEE-eCCceEEEEe--cceEEEEcCCCCcCcccEEEcCCchhE
Confidence 889999999775543332111 1222223 3344555442 223333344332221 11122335566
Q ss_pred EEEcCCCCEEEEEeCCCcEEEeC
Q 044075 764 LAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 764 lafspdg~~LaSgs~DG~I~IWd 786 (786)
+++. ..+|+..+.+ .|.||+
T Consensus 234 ~~~~--~pyli~~~~~-~iEV~~ 253 (275)
T PF00780_consen 234 VAYS--SPYLIAFSSN-SIEVRS 253 (275)
T ss_pred EEEE--CCEEEEECCC-EEEEEE
Confidence 6664 4577776654 488874
No 344
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.94 E-value=0.0047 Score=66.57 Aligned_cols=254 Identities=9% Similarity=0.104 Sum_probs=150.5
Q ss_pred CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe----------CCCcEEEEcCCCCcceeee-ecC-CC----
Q 044075 531 KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS----------FDKTVRIWDAAKPNFCLQT-YTG-HN---- 594 (786)
Q Consensus 531 g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs----------~Dg~I~VWdl~s~~~~~~~-~~~-h~---- 594 (786)
+.|.|+|.++++.+-.+.. +..-.+..+|+++.+++++ ..-.|.+||..+-...... +.. |.
T Consensus 17 ~rv~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~ 94 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV 94 (342)
T ss_dssp EEEEEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS
T ss_pred ceEEEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec
Confidence 4799999999887766643 2234467899999888754 2346999999886532221 111 11
Q ss_pred CCeEEEEEecCCCeEEEEE-cCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcC-CCcEEEEE
Q 044075 595 NHVMSLDFHPKKNDLFCSC-DGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVE-TDRLTHSF 672 (786)
Q Consensus 595 ~~V~sl~~sp~g~~ll~sg-s~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~-t~~~i~~l 672 (786)
.....+.++.+++++++.- +---.|.|.|+...+.+....-+-+...+-.....|.+.|.||.+..+.+. .++...+.
T Consensus 95 ~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~ 174 (342)
T PF06433_consen 95 PYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKS 174 (342)
T ss_dssp --GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEE
T ss_pred ccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEecCCCceEEEecCCceEEEEECCCCCEeEee
Confidence 1223456677777665432 334568888888888877665333333332223568899999999999888 44443222
Q ss_pred ----ecCCCCEE-EEEEcCCCC-EEEEEeCCeEEEEECCCCee--EEEEccC----------CCceEEEEEeCCCCEEEE
Q 044075 673 ----KGHSTEIH-SVCWDTNGE-YLASVSQDSVRVWSLASGEC--IHELSSS----------GNKFHSCIFHPSYPTLMV 734 (786)
Q Consensus 673 ----~~h~~~I~-sv~~spdg~-~Lasgs~D~I~vwDl~s~~~--i~~l~~~----------~~~I~sv~fspdg~~L~s 734 (786)
.....++. .-.+...+. +++..-.+.|+-.|+..... ...+... .+...-+++++..+.|++
T Consensus 175 t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyv 254 (342)
T PF06433_consen 175 TKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYV 254 (342)
T ss_dssp EEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEE
T ss_pred ccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEE
Confidence 11222222 334444444 44433334888888776532 2222211 122334778877666665
Q ss_pred EECC--------C--eEEEEECCCCeEEEEcccCCCeEEEEEcCCCC-EEEEEe-CCCcEEEeC
Q 044075 735 IGGY--------Q--SLELWNMAENKCMTIAAHDCVISALAQSPVTG-MVASAS-HDKSVKIWK 786 (786)
Q Consensus 735 gs~d--------g--~I~IwDl~~~~~~~~~~h~~~V~slafspdg~-~LaSgs-~DG~I~IWd 786 (786)
.-.. + .|.+||+.+++.+....-...+.+|..+.+.+ +|++.+ .++.|.|||
T Consensus 255 LMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D 318 (342)
T PF06433_consen 255 LMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYD 318 (342)
T ss_dssp EEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEE
T ss_pred EecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEe
Confidence 4321 1 58888999999886655555688999998776 666554 578999986
No 345
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.93 E-value=0.003 Score=70.07 Aligned_cols=226 Identities=17% Similarity=0.215 Sum_probs=130.7
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec-CCC----------------CCCeEEEEEccCCCEEEEEeC
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP-DDH----------------NHIITDVRFRPNSTQLATSSF 571 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l-~~h----------------~~~V~sl~fspdg~~Lasgs~ 571 (786)
...+....|||+|+.||... ++.|.++++.++.....- .+. -+.-..+.|+||+++|+....
T Consensus 42 ~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~ 120 (353)
T PF00930_consen 42 PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRF 120 (353)
T ss_dssp ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEE
T ss_pred ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEE
Confidence 56788999999999999885 789999998776444322 110 112356889999999887653
Q ss_pred C-C-----------------------------------cEEEEcCCCCccee-eee---cCCCCCeEEEEEecCCCeE-E
Q 044075 572 D-K-----------------------------------TVRIWDAAKPNFCL-QTY---TGHNNHVMSLDFHPKKNDL-F 610 (786)
Q Consensus 572 D-g-----------------------------------~I~VWdl~s~~~~~-~~~---~~h~~~V~sl~~sp~g~~l-l 610 (786)
| . .+.|+|+.+++... ... ..-...+..+.|.+++..+ +
T Consensus 121 d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~ 200 (353)
T PF00930_consen 121 DEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWV 200 (353)
T ss_dssp E-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEE
T ss_pred CCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEE
Confidence 3 1 13334554443211 111 1234567888999888734 3
Q ss_pred EEEcCC---CcEEEEeCCCCeeeEeec----C---CeEEEEEe-CCCCEEE-EEECCC--eEEEEEcCCCcEEEEEecCC
Q 044075 611 CSCDGN---SEIRFWNLSQYSCARISK----G---GTVQVRFQ-PRLGLLL-AAASEN--VVSIFDVETDRLTHSFKGHS 676 (786)
Q Consensus 611 ~sgs~D---g~I~iwDl~~~~~~~~~~----~---~i~~i~~s-p~g~~Ll-~gs~dg--~I~iwD~~t~~~i~~l~~h~ 676 (786)
.....+ ..+.++|..++.+..... + ....+.+. +++..++ ....+| .|++++...+... .+....
T Consensus 201 ~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~-~lT~G~ 279 (353)
T PF00930_consen 201 QWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPR-QLTSGD 279 (353)
T ss_dssp EEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEE-ESS-SS
T ss_pred EEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccccee-ccccCc
Confidence 333433 245667776655433222 1 22345554 6665544 444555 5777777766543 444445
Q ss_pred CCEEE-EEEcCCCCEEE-EEeCC-----eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEE
Q 044075 677 TEIHS-VCWDTNGEYLA-SVSQD-----SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 677 ~~I~s-v~~spdg~~La-sgs~D-----~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
-.|.. +.|+++++.|+ ++..+ .|...++..+..+..+.........+.|+|++++++...
T Consensus 280 ~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~ 346 (353)
T PF00930_consen 280 WEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTY 346 (353)
T ss_dssp S-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEE
T ss_pred eeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEE
Confidence 56654 67888877654 44431 466667773445556665544446999999999877654
No 346
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.92 E-value=0.00035 Score=78.92 Aligned_cols=187 Identities=14% Similarity=0.207 Sum_probs=122.8
Q ss_pred eeeecCCCCCeEEEEEecCCCeEEEEEcCC---CcEEEEeCCCCeeeEee--cCCeEEEEEeCCCCEEEEEEC-CC--eE
Q 044075 587 LQTYTGHNNHVMSLDFHPKKNDLFCSCDGN---SEIRFWNLSQYSCARIS--KGGTVQVRFQPRLGLLLAAAS-EN--VV 658 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D---g~I~iwDl~~~~~~~~~--~~~i~~i~~sp~g~~Ll~gs~-dg--~I 658 (786)
...+......+..-+|+|++..+....-.. ..+.++|+.++...... .+......|+|||+.|+.+.. |+ .|
T Consensus 185 ~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~i 264 (425)
T COG0823 185 QQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDI 264 (425)
T ss_pred eeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccE
Confidence 344444455677788999988776554322 35999999987665544 455667789999998777765 44 58
Q ss_pred EEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEE
Q 044075 659 SIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMV 734 (786)
Q Consensus 659 ~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~s 734 (786)
+++|+..+...+ +....+.-..-.|+|||++|+..++. .|.++|...... ..+......-..-.|+|+|++|+.
T Consensus 265 y~~dl~~~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~ 342 (425)
T COG0823 265 YLMDLDGKNLPR-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKIVF 342 (425)
T ss_pred EEEcCCCCccee-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccCCCCCCEEEE
Confidence 888988776433 43222223366899999999888765 588888877654 333333333337789999999988
Q ss_pred EECC-C--eEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEE
Q 044075 735 IGGY-Q--SLELWNMAENKCMTIAAHDCVISALAQSPVTGMVAS 775 (786)
Q Consensus 735 gs~d-g--~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaS 775 (786)
.+.. | .|.+.|+.++.......+......-.|.+++..|..
T Consensus 343 ~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~ 386 (425)
T COG0823 343 ESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMF 386 (425)
T ss_pred EeccCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCceEEE
Confidence 8854 3 477778776664444444444445555666654443
No 347
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.90 E-value=0.0038 Score=70.02 Aligned_cols=215 Identities=15% Similarity=0.156 Sum_probs=153.8
Q ss_pred CeEEEEEcCCCCEE-EEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeC---CCcEEEEcCCCCcce
Q 044075 511 KVTCCHFSSDGKLL-ASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSF---DKTVRIWDAAKPNFC 586 (786)
Q Consensus 511 ~V~~lafSpdg~~L-asgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~---Dg~I~VWdl~s~~~~ 586 (786)
.-.++++++++..+ ++...++.|.+.|..+.+.......-. ....++++++++.++++.. ++++.+.|..+.+..
T Consensus 75 ~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~ 153 (381)
T COG3391 75 YPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVT 153 (381)
T ss_pred cccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEE
Confidence 34578888888854 444456899999988776666553322 5678999999988777765 688888888887744
Q ss_pred eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE------e-ecCCeEEEEEeCCCCEEEEEECC---C
Q 044075 587 LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR------I-SKGGTVQVRFQPRLGLLLAAASE---N 656 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~------~-~~~~i~~i~~sp~g~~Ll~gs~d---g 656 (786)
.....+ ..+ ..+++.|++..++++-..++.|.+.|.......+ . .......+.+.+++.++++.... +
T Consensus 154 ~~~~vG-~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~ 231 (381)
T COG3391 154 ATIPVG-NTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSN 231 (381)
T ss_pred EEEecC-CCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCc
Confidence 443332 233 8999999999888787789999999988776664 1 11334678899999987777665 4
Q ss_pred eEEEEEcCCCcEEEEEecCCC-CEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCCC---ceEEEEEeCC
Q 044075 657 VVSIFDVETDRLTHSFKGHST-EIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSGN---KFHSCIFHPS 728 (786)
Q Consensus 657 ~I~iwD~~t~~~i~~l~~h~~-~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~~---~I~sv~fspd 728 (786)
.+.+.|..++........-.. ....+.++|+|.++.+.... .+.+.|..+......+..... .+..+++.+.
T Consensus 232 ~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 309 (381)
T COG3391 232 NVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISPL 309 (381)
T ss_pred eEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceeccceee
Confidence 899999998877665221122 56678999999998887544 899999998877766554322 3455555543
No 348
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.90 E-value=0.0053 Score=64.25 Aligned_cols=198 Identities=13% Similarity=0.182 Sum_probs=112.6
Q ss_pred eEEeecCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEcCCCeeeeecCCC-CCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 502 VSSIRKSSSKVTCCHFSSDGK-LLASAGHDKKVVVWNMENFQTECTPDDH-NHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpdg~-~Lasgs~Dg~V~IWdl~t~~~~~~l~~h-~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
-+.+.+-...|..|+|+|+.+ ++++....+.|..++. +++.+..+.-. .+..-.|++..++.++++.-.++.+.+++
T Consensus 14 ~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~ 92 (248)
T PF06977_consen 14 AKPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFT 92 (248)
T ss_dssp EEE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEE
T ss_pred eeECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEE
Confidence 345666666799999999755 5666667788888886 46777766433 35678899987787666665689999998
Q ss_pred CCCCccee-----eee-----cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC---CeeeE-----------eecC
Q 044075 580 AAKPNFCL-----QTY-----TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ---YSCAR-----------ISKG 635 (786)
Q Consensus 580 l~s~~~~~-----~~~-----~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~---~~~~~-----------~~~~ 635 (786)
+......+ ..+ ..+...+..++|.+.++.++++.- ..-..+|.+.. ..... ....
T Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE-~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (248)
T PF06977_consen 93 IDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKE-RKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVR 171 (248)
T ss_dssp E----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEE-SSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS
T ss_pred EeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeC-CCChhhEEEccccCccceeeccccccccccceec
Confidence 84432111 111 124456899999999898886654 44455555432 11111 1114
Q ss_pred CeEEEEEeCCCCEEEEEEC-CCeEEEEEcCCCcEEEEEecCC---------CCEEEEEEcCCCCEEEEEeCCeEEEE
Q 044075 636 GTVQVRFQPRLGLLLAAAS-ENVVSIFDVETDRLTHSFKGHS---------TEIHSVCWDTNGEYLASVSQDSVRVW 702 (786)
Q Consensus 636 ~i~~i~~sp~g~~Ll~gs~-dg~I~iwD~~t~~~i~~l~~h~---------~~I~sv~~spdg~~Lasgs~D~I~vw 702 (786)
.+..+.++|..+.|++-+. ...|.++| ..++++..+.-.. ...-.|+|+++|++.++.-.+.+++|
T Consensus 172 d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpNlfy~f 247 (248)
T PF06977_consen 172 DLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPNLFYRF 247 (248)
T ss_dssp ---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTTEEEEE
T ss_pred cccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCceEEEe
Confidence 5678899998877766665 57788888 5676666554222 24678999999977776644455554
No 349
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.90 E-value=0.0096 Score=63.32 Aligned_cols=222 Identities=13% Similarity=0.130 Sum_probs=126.9
Q ss_pred CCCCEEEEEECCCeEEEEEcC-CCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee--------
Q 044075 519 SDGKLLASAGHDKKVVVWNME-NFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT-------- 589 (786)
Q Consensus 519 pdg~~Lasgs~Dg~V~IWdl~-t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~-------- 589 (786)
..++.|+.|+.+| |.++++. ..+...... ...|..+...++-+.|++-+ |+.++++++..-......
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~ 80 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS 80 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence 3578899999988 9999983 333333332 22399999999877777665 599999998764422210
Q ss_pred -----ecCCCCCeEEEE--EecCCCeEEEEEcCCCcEEEEeCCCC-----eeeEee--cCCeEEEEEeCCCCEEEEEECC
Q 044075 590 -----YTGHNNHVMSLD--FHPKKNDLFCSCDGNSEIRFWNLSQY-----SCARIS--KGGTVQVRFQPRLGLLLAAASE 655 (786)
Q Consensus 590 -----~~~h~~~V~sl~--~sp~g~~ll~sgs~Dg~I~iwDl~~~-----~~~~~~--~~~i~~i~~sp~g~~Ll~gs~d 655 (786)
.......+..++ -...+...++.+. ...|.+|.+... ...+.+ ...+..++|. ++.++++..
T Consensus 81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~-kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~v~~~- 156 (275)
T PF00780_consen 81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAV-KKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKICVGTS- 156 (275)
T ss_pred ccccccccccCCeeEEeeccccccceEEEEEE-CCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEEEEeC-
Confidence 111223344444 1123333443333 458888776542 233322 3677788888 566777765
Q ss_pred CeEEEEEcCCCcEEEEEecC------------CCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEE--EEccCCCceE
Q 044075 656 NVVSIFDVETDRLTHSFKGH------------STEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIH--ELSSSGNKFH 721 (786)
Q Consensus 656 g~I~iwD~~t~~~i~~l~~h------------~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~--~l~~~~~~I~ 721 (786)
+...+.|+.++.....+... ..++..+.. +++.+|++ .++.-.+.|. .|+..+ .+.- .....
T Consensus 157 ~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~-~~~~g~fv~~-~G~~~r~~~i~W-~~~p~ 232 (275)
T PF00780_consen 157 KGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLC-YDNIGVFVNK-NGEPSRKSTIQW-SSAPQ 232 (275)
T ss_pred CceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEE-ecceEEEEcC-CCCcCcccEEEc-CCchh
Confidence 55888899877554433211 123333443 34555553 3333333333 343222 2222 23455
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEc
Q 044075 722 SCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIA 755 (786)
Q Consensus 722 sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~ 755 (786)
++++. .+||++.+. +.|.||++.+++++...
T Consensus 233 ~~~~~--~pyli~~~~-~~iEV~~~~~~~lvQ~i 263 (275)
T PF00780_consen 233 SVAYS--SPYLIAFSS-NSIEVRSLETGELVQTI 263 (275)
T ss_pred EEEEE--CCEEEEECC-CEEEEEECcCCcEEEEE
Confidence 66663 457777666 45999999999876443
No 350
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=97.88 E-value=0.00021 Score=82.29 Aligned_cols=70 Identities=17% Similarity=0.170 Sum_probs=65.0
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 512 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 512 V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
+++++|+|..-.|+.|-.-|.+.+|...+.+.......|..+|..+.|+++|..++++..-|.|.+|...
T Consensus 62 atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 62 ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred hhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 5679999998899999999999999999888888888999999999999999999999999999999765
No 351
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.87 E-value=0.0068 Score=63.46 Aligned_cols=194 Identities=13% Similarity=0.190 Sum_probs=111.6
Q ss_pred eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec----CCeEEEEEeCCCCEEEEEECCCeEEEEEcC
Q 044075 589 TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK----GGTVQVRFQPRLGLLLAAASENVVSIFDVE 664 (786)
Q Consensus 589 ~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~ 664 (786)
.+.+-...+..|+|+|+.+.|+++.+..+.|..++.. ++.++... +..-.|++..++.++++--.++.+.++++.
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 3445556799999999999999999999999999975 56665543 456778887776655555458999999884
Q ss_pred CCc------EEEEEe-----cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC---CeeEEE--E------ccCCCceE
Q 044075 665 TDR------LTHSFK-----GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS---GECIHE--L------SSSGNKFH 721 (786)
Q Consensus 665 t~~------~i~~l~-----~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s---~~~i~~--l------~~~~~~I~ 721 (786)
... ....+. .++..+-.++|++.+..|+++-+. -..||.+.. ...+.. . ......+.
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S 174 (248)
T PF06977_consen 95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS 174 (248)
T ss_dssp ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence 321 112222 245668999999987777777666 555555543 221111 1 11234578
Q ss_pred EEEEeCCCCEEEEEEC-CCeEEEEECCCCeEEE---Ecc--c-----CCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 722 SCIFHPSYPTLMVIGG-YQSLELWNMAENKCMT---IAA--H-----DCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 722 sv~fspdg~~L~sgs~-dg~I~IwDl~~~~~~~---~~~--h-----~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
++.++|....|++-+. ...|.++| .+++.+. +.. | -..--.|+|.++|++.+ .++-+...+|
T Consensus 175 ~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYI-vsEpNlfy~f 247 (248)
T PF06977_consen 175 GLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYI-VSEPNLFYRF 247 (248)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEE-EETTTEEEEE
T ss_pred ceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEE-EcCCceEEEe
Confidence 8999998766665555 45888899 4454442 222 1 12477899999986544 4566666655
No 352
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.80 E-value=0.00011 Score=82.72 Aligned_cols=76 Identities=18% Similarity=0.260 Sum_probs=65.4
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN 584 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~ 584 (786)
.....|.|++++|+.+.|+.|+.||.|++||...+... +..+.-..+.++|+|+|.+|++|+..|.+.+||+.-..
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp 332 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSP 332 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence 47789999999999999999999999999998765333 33445668899999999999999999999999987554
No 353
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.76 E-value=0.018 Score=67.23 Aligned_cols=186 Identities=9% Similarity=0.073 Sum_probs=113.1
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCC-CCeE---E-------EEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHN-HIIT---D-------VRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~-~~V~---s-------l~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
+..|++++.++.|+-.|..+++.+-.+.... ..+. + +++. +..+++++.|+.|.-.|..+++.+-..
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~--~~~v~v~t~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY--DGKVFFGTLDARLVALDAKTGKVVWSK 146 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE--CCEEEEEcCCCEEEEEECCCCCEEeec
Confidence 4567777778899999999998887664321 1111 1 1222 346778888999999999998843222
Q ss_pred ec-CCC--CCeEE-EEEecCCCeEEEEEc-----CCCcEEEEeCCCCeeeEeecCC------------------------
Q 044075 590 YT-GHN--NHVMS-LDFHPKKNDLFCSCD-----GNSEIRFWNLSQYSCARISKGG------------------------ 636 (786)
Q Consensus 590 ~~-~h~--~~V~s-l~~sp~g~~ll~sgs-----~Dg~I~iwDl~~~~~~~~~~~~------------------------ 636 (786)
-. .+. ..+.+ -.+. +..+++..+ .+|.|..+|.++++.+-.+...
T Consensus 147 ~~~~~~~~~~~tssP~v~--~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~ 224 (527)
T TIGR03075 147 KNGDYKAGYTITAAPLVV--KGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWP 224 (527)
T ss_pred ccccccccccccCCcEEE--CCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCC
Confidence 11 111 11211 1111 234443322 2688999999988766432210
Q ss_pred ----------e-EEEEEeCCCCEEEEEECC-----C-----------eEEEEEcCCCcEEEEEecCCCCEE---------
Q 044075 637 ----------T-VQVRFQPRLGLLLAAASE-----N-----------VVSIFDVETDRLTHSFKGHSTEIH--------- 680 (786)
Q Consensus 637 ----------i-~~i~~sp~g~~Ll~gs~d-----g-----------~I~iwD~~t~~~i~~l~~h~~~I~--------- 680 (786)
+ ..+.+.+..+.++.+..+ + .|.-.|+++++....++.....+.
T Consensus 225 ~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~ 304 (527)
T TIGR03075 225 GDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMI 304 (527)
T ss_pred CCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcE
Confidence 0 123566666777776622 2 677889999999888775222222
Q ss_pred EEEEcCCCC---EEEEEeCC-eEEEEECCCCeeE
Q 044075 681 SVCWDTNGE---YLASVSQD-SVRVWSLASGECI 710 (786)
Q Consensus 681 sv~~spdg~---~Lasgs~D-~I~vwDl~s~~~i 710 (786)
-+.+..+|+ .++.+..+ .+.++|-++++.+
T Consensus 305 l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 305 LFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred EEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 122334665 66677777 8999999999876
No 354
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.75 E-value=8e-06 Score=91.57 Aligned_cols=195 Identities=16% Similarity=0.276 Sum_probs=134.2
Q ss_pred CCeEEEEEccCC--CEEEEEeCCCcEEEEcCCCCcce-eeeecCCCCCeEEEEEecCCCeEEEEEc----CCCcEEEEeC
Q 044075 552 HIITDVRFRPNS--TQLATSSFDKTVRIWDAAKPNFC-LQTYTGHNNHVMSLDFHPKKNDLFCSCD----GNSEIRFWNL 624 (786)
Q Consensus 552 ~~V~sl~fspdg--~~Lasgs~Dg~I~VWdl~s~~~~-~~~~~~h~~~V~sl~~sp~g~~ll~sgs----~Dg~I~iwDl 624 (786)
..+.|+++.-+. .++++|..+|.|.+-.++..... .....+|...+++++|++-+..++++|- .|..+.|||+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi 136 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI 136 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence 456677766533 47888999999999988765543 4456678889999999987666665652 4678999999
Q ss_pred CCCeee-----Ee---ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCc-EEEEEecCCCCEEEEEEcC-CCCEEEEE
Q 044075 625 SQYSCA-----RI---SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDR-LTHSFKGHSTEIHSVCWDT-NGEYLASV 694 (786)
Q Consensus 625 ~~~~~~-----~~---~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~-~i~~l~~h~~~I~sv~~sp-dg~~Lasg 694 (786)
.+.-.. .. ...+..++||..+.+.+++|.....+.++|++... ....+ .+..+..+.++| .+.|+++-
T Consensus 137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~sv--nTk~vqG~tVdp~~~nY~cs~ 214 (783)
T KOG1008|consen 137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSV--NTKYVQGITVDPFSPNYFCSN 214 (783)
T ss_pred ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhh--hhhhcccceecCCCCCceecc
Confidence 875211 11 11345578898888899999999999999998432 11111 344567788889 88999988
Q ss_pred eCCeEEEEE-CCCCe-eEEEEccCCC----ceEEEEEeCCCCE-EEEEECC-CeEEEEECCC
Q 044075 695 SQDSVRVWS-LASGE-CIHELSSSGN----KFHSCIFHPSYPT-LMVIGGY-QSLELWNMAE 748 (786)
Q Consensus 695 s~D~I~vwD-l~s~~-~i~~l~~~~~----~I~sv~fspdg~~-L~sgs~d-g~I~IwDl~~ 748 (786)
.++.|.+|| .++-+ ++..+..... .+..++|.|...- +++...| ++|++||+..
T Consensus 215 ~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 215 SDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred ccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 877999999 33322 2222222222 4889999996543 4444444 5899998753
No 355
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.73 E-value=0.005 Score=62.94 Aligned_cols=148 Identities=10% Similarity=-0.022 Sum_probs=106.5
Q ss_pred EEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee--cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCC
Q 044075 601 DFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS--KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTE 678 (786)
Q Consensus 601 ~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~--~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~ 678 (786)
...++.+.+++.++..+.+...|..+++..... ...+.+-+.- -|++++.|+..|.+++.+.+++..+..+.....-
T Consensus 17 VV~~dskT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~v 95 (354)
T KOG4649|consen 17 VVCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETV 95 (354)
T ss_pred EEecCCceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhh
Confidence 344556677778888888888888888765432 2333322222 4678999999999999999999888777643322
Q ss_pred EEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC
Q 044075 679 IHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 679 I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~ 749 (786)
-.....++++.++.+++.| +.+..|.++..++.+.+..++...+-++.|....|+++...|.|.--...+.
T Consensus 96 k~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~ 167 (354)
T KOG4649|consen 96 KVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPY 167 (354)
T ss_pred ccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCCC
Confidence 2234457899999999999 9999999999999998877777777777775555666666665554444443
No 356
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.017 Score=62.58 Aligned_cols=213 Identities=9% Similarity=0.061 Sum_probs=129.3
Q ss_pred EEEccCCCEE-EEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-
Q 044075 557 VRFRPNSTQL-ATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK- 634 (786)
Q Consensus 557 l~fspdg~~L-asgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~- 634 (786)
..|.++...| .+--..+.|.-|+..++.. ..+. +...+.++.....+..|+ +| +..+.+++.+.+.....+.
T Consensus 30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g~~--~~~~-~p~~~~~~~~~d~~g~Lv-~~--~~g~~~~~~~~~~~~t~~~~ 103 (307)
T COG3386 30 PVWDPDRGALLWVDILGGRIHRLDPETGKK--RVFP-SPGGFSSGALIDAGGRLI-AC--EHGVRLLDPDTGGKITLLAE 103 (307)
T ss_pred ccCcCCCCEEEEEeCCCCeEEEecCCcCce--EEEE-CCCCcccceeecCCCeEE-EE--ccccEEEeccCCceeEEecc
Confidence 3466766644 4444577888898876653 2332 223445555544445454 44 3446666765544422221
Q ss_pred -------CCeEEEEEeCCCCEEEEEEC-----------CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC
Q 044075 635 -------GGTVQVRFQPRLGLLLAAAS-----------ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ 696 (786)
Q Consensus 635 -------~~i~~i~~sp~g~~Ll~gs~-----------dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~ 696 (786)
.....+.+.|+|.+.+.... -|.|+.+|. .+..++.+..+-..-+.|+||||++.|+.+..
T Consensus 104 ~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT 182 (307)
T COG3386 104 PEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADT 182 (307)
T ss_pred ccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeC
Confidence 23456788888877666544 134555554 46666666666666789999999988877766
Q ss_pred C--eEEEEECCC--C----ee-EEEEccCCCceEEEEEeCCCCEEEEEECCC-eEEEEECCCCeEE-EEcccCCCeEEEE
Q 044075 697 D--SVRVWSLAS--G----EC-IHELSSSGNKFHSCIFHPSYPTLMVIGGYQ-SLELWNMAENKCM-TIAAHDCVISALA 765 (786)
Q Consensus 697 D--~I~vwDl~s--~----~~-i~~l~~~~~~I~sv~fspdg~~L~sgs~dg-~I~IwDl~~~~~~-~~~~h~~~V~sla 765 (786)
. .|.-|++.. + .. ...+....+..-.++...+|.+.+++...| .|.+|+.. ++.+ .+.-....+++++
T Consensus 183 ~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~ 261 (307)
T COG3386 183 PANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPA 261 (307)
T ss_pred CCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccce
Confidence 4 677777652 1 11 122223345566778888888776555554 99999999 5555 4444547888888
Q ss_pred Ec-CCCCEEEEEe
Q 044075 766 QS-PVTGMVASAS 777 (786)
Q Consensus 766 fs-pdg~~LaSgs 777 (786)
|- ++.+.|+..+
T Consensus 262 FgG~~~~~L~iTs 274 (307)
T COG3386 262 FGGPDLNTLYITS 274 (307)
T ss_pred EeCCCcCEEEEEe
Confidence 86 3445444443
No 357
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.58 E-value=0.087 Score=59.68 Aligned_cols=190 Identities=13% Similarity=0.122 Sum_probs=101.9
Q ss_pred eEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc-c----eeeeecCCCCCeEEEEEecCC
Q 044075 532 KVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN-F----CLQTYTGHNNHVMSLDFHPKK 606 (786)
Q Consensus 532 ~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~-~----~~~~~~~h~~~V~sl~~sp~g 606 (786)
.|.||+.. |+.+..+.-..+.|.++.|+.+. .|++...||.+++||+.... . .+....-....+..+.+..+|
T Consensus 62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~G 139 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDE-ELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKNG 139 (410)
T ss_pred EEEEECCC-CCEeEEEEECCCCEEEEEECCCC-eEEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCCCC
Confidence 58888865 45555554334889999999765 56667789999999986322 0 000011111122222222222
Q ss_pred CeEEEEEcCCCcEEEEe-CCCCeeeEee---cCCeE----------EEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEE
Q 044075 607 NDLFCSCDGNSEIRFWN-LSQYSCARIS---KGGTV----------QVRFQPRLGLLLAAASENVVSIFDVETDRLTHSF 672 (786)
Q Consensus 607 ~~ll~sgs~Dg~I~iwD-l~~~~~~~~~---~~~i~----------~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l 672 (786)
+++.. .++.+.+.+ .......+.. ..... ...+..+....+....++.+.+.+....+. +
T Consensus 140 --ivvLt-~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i 213 (410)
T PF04841_consen 140 --IVVLT-GNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---I 213 (410)
T ss_pred --EEEEC-CCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---c
Confidence 22222 234444332 2211111110 00000 022344444555555555566444332211 2
Q ss_pred ecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC-CCceEEEEEeCCCC
Q 044075 673 KGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS-GNKFHSCIFHPSYP 730 (786)
Q Consensus 673 ~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~-~~~I~sv~fspdg~ 730 (786)
. ..+++..+++||++++||.-..+ .+.|.+..-.+.+.++... ......+.|.-+..
T Consensus 214 ~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da 272 (410)
T PF04841_consen 214 D-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA 272 (410)
T ss_pred c-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence 2 24689999999999999998887 8888877666666666544 34556677765543
No 358
>PRK10115 protease 2; Provisional
Probab=97.56 E-value=0.17 Score=61.28 Aligned_cols=236 Identities=10% Similarity=-0.001 Sum_probs=124.0
Q ss_pred CeEEEEEcCCCCEEEEEEC-----CCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC------CcEEEEc
Q 044075 511 KVTCCHFSSDGKLLASAGH-----DKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFD------KTVRIWD 579 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~-----Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D------g~I~VWd 579 (786)
.+..+.|||||++|+.+.. ...|++.|+.+++.+........ ..++|.+|++.|+.+..+ ..|+.++
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~ 205 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT 205 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence 4667889999999887643 23588999988764332222221 469999998876665442 3577888
Q ss_pred CCCCc-ceeeeecCCCCCeE-EEEEecCCCeEEEEEc--CCCcEEEEeCC--CCe--eeEeecCC-eEEEEEeCCCCEEE
Q 044075 580 AAKPN-FCLQTYTGHNNHVM-SLDFHPKKNDLFCSCD--GNSEIRFWNLS--QYS--CARISKGG-TVQVRFQPRLGLLL 650 (786)
Q Consensus 580 l~s~~-~~~~~~~~h~~~V~-sl~~sp~g~~ll~sgs--~Dg~I~iwDl~--~~~--~~~~~~~~-i~~i~~sp~g~~Ll 650 (786)
+.++. .....+........ .+..+.++..+++.+. .++.+.+|+.. ... ++...... ...+. +. +..|+
T Consensus 206 lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~ly 283 (686)
T PRK10115 206 IGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-HY-QHRFY 283 (686)
T ss_pred CCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-eC-CCEEE
Confidence 88762 12333333333333 3333447777665544 34678888853 222 22222222 22222 22 34444
Q ss_pred EEECC----CeEEEEEcCCCcEEEEEecC-C-CCEEEEEEcCCCCEEEEEeCC---eEEEEECCCCeeEEEEc-cCCCce
Q 044075 651 AAASE----NVVSIFDVETDRLTHSFKGH-S-TEIHSVCWDTNGEYLASVSQD---SVRVWSLASGECIHELS-SSGNKF 720 (786)
Q Consensus 651 ~gs~d----g~I~iwD~~t~~~i~~l~~h-~-~~I~sv~~spdg~~Lasgs~D---~I~vwDl~s~~~i~~l~-~~~~~I 720 (786)
..+.. ..|...++........+..+ . ..|..+.+.. +.++++...+ .+.++|...+ .+..+. .....+
T Consensus 284 ~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~l~~~~~~~g~~~l~~~~~~~~-~~~~l~~~~~~~~ 361 (686)
T PRK10115 284 LRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFT-DWLVVEERQRGLTSLRQINRKTR-EVIGIAFDDPAYV 361 (686)
T ss_pred EEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEEC-CEEEEEEEeCCEEEEEEEcCCCC-ceEEecCCCCceE
Confidence 44432 23444455421112233334 2 3677888873 3444444444 4677776543 333433 222223
Q ss_pred EEEEEe--CCCC-EEEEEECC---CeEEEEECCCCeEE
Q 044075 721 HSCIFH--PSYP-TLMVIGGY---QSLELWNMAENKCM 752 (786)
Q Consensus 721 ~sv~fs--pdg~-~L~sgs~d---g~I~IwDl~~~~~~ 752 (786)
..+.++ +++. .+++.++. +.++.||+.+++..
T Consensus 362 ~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~~~ 399 (686)
T PRK10115 362 TWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERR 399 (686)
T ss_pred eeecccCCCCCceEEEEEecCCCCCEEEEEECCCCcEE
Confidence 333344 3444 44444332 57889998876543
No 359
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.56 E-value=0.064 Score=62.73 Aligned_cols=232 Identities=10% Similarity=0.097 Sum_probs=132.8
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCC--C--CCeEEEEEccCCCEEEEEe------CCCcEEEEcCCCCcceeeee
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDH--N--HIITDVRFRPNSTQLATSS------FDKTVRIWDAAKPNFCLQTY 590 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h--~--~~V~sl~fspdg~~Lasgs------~Dg~I~VWdl~s~~~~~~~~ 590 (786)
+..++.++.|+.|...|..+++.+-..... . ..+++--..-++ .++++. .+|.|..+|.++++..-...
T Consensus 120 ~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~ 198 (527)
T TIGR03075 120 DGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRY 198 (527)
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEecc
Confidence 346777888999999999999988765421 1 112211111134 455543 26889999998877422211
Q ss_pred cC--C----------------------------CCCeE-EEEEecCCCeEEEEEcC----CC-----------cEEEEeC
Q 044075 591 TG--H----------------------------NNHVM-SLDFHPKKNDLFCSCDG----NS-----------EIRFWNL 624 (786)
Q Consensus 591 ~~--h----------------------------~~~V~-sl~~sp~g~~ll~sgs~----Dg-----------~I~iwDl 624 (786)
.. . ...++ .+++.|+.+.+++..+. ++ .|.-.|+
T Consensus 199 ~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~ 278 (527)
T TIGR03075 199 TVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDP 278 (527)
T ss_pred CcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEcc
Confidence 10 0 11122 34566655555544332 22 5777788
Q ss_pred CCCeeeEeecC------------CeEEEEEeCCCC---EEEEEECCCeEEEEEcCCCcEEEEEe--c----------CC-
Q 044075 625 SQYSCARISKG------------GTVQVRFQPRLG---LLLAAASENVVSIFDVETDRLTHSFK--G----------HS- 676 (786)
Q Consensus 625 ~~~~~~~~~~~------------~i~~i~~sp~g~---~Ll~gs~dg~I~iwD~~t~~~i~~l~--~----------h~- 676 (786)
++++..-.+.. ...-+.+..+++ .++.+..+|.++++|.++++++.... . ..
T Consensus 279 ~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g 358 (527)
T TIGR03075 279 DTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTG 358 (527)
T ss_pred ccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCCC
Confidence 88887655441 112233334665 67788899999999999998863210 0 00
Q ss_pred CC-----------------E-----------EEEEEcCCCCEEEEEeCC-------------------------------
Q 044075 677 TE-----------------I-----------HSVCWDTNGEYLASVSQD------------------------------- 697 (786)
Q Consensus 677 ~~-----------------I-----------~sv~~spdg~~Lasgs~D------------------------------- 697 (786)
.+ + ..++++|+..++++...+
T Consensus 359 ~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~ 438 (527)
T TIGR03075 359 RPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDD 438 (527)
T ss_pred CCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCC
Confidence 00 0 014555655444433221
Q ss_pred ---eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEE
Q 044075 698 ---SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTI 754 (786)
Q Consensus 698 ---~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~ 754 (786)
.|.-+|+.+++.+...........+. +.-.+..+++++.+|.++.+|.++++.+-.
T Consensus 439 ~~g~l~AiD~~tGk~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~ 497 (527)
T TIGR03075 439 HMGSLIAWDPITGKIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWK 497 (527)
T ss_pred CceeEEEEeCCCCceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEE
Confidence 46677888887776654332212222 222445677788899999999999998743
No 360
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.56 E-value=0.025 Score=63.99 Aligned_cols=188 Identities=8% Similarity=0.072 Sum_probs=97.0
Q ss_pred cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE----eecCCeEEE-----EEeC
Q 044075 574 TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR----ISKGGTVQV-----RFQP 644 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~----~~~~~i~~i-----~~sp 644 (786)
.|+||+..... +..+.-..+.|.++.|..+ ..|+ ....||.+++||+....... .....+... .+..
T Consensus 62 ~I~iys~sG~l--l~~i~w~~~~iv~~~wt~~-e~Lv-vV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~ 137 (410)
T PF04841_consen 62 SIQIYSSSGKL--LSSIPWDSGRIVGMGWTDD-EELV-VVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYK 137 (410)
T ss_pred EEEEECCCCCE--eEEEEECCCCEEEEEECCC-CeEE-EEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCC
Confidence 36667665432 2222222278999999875 4455 44569999999986433000 011122222 2222
Q ss_pred CCCEEEEEECCCeEEEEEcCCCc-EEEEEe---c-----CCC-CEEE-EEEcCCCCEEEEEeCC-eEEEEECCCCeeEEE
Q 044075 645 RLGLLLAAASENVVSIFDVETDR-LTHSFK---G-----HST-EIHS-VCWDTNGEYLASVSQD-SVRVWSLASGECIHE 712 (786)
Q Consensus 645 ~g~~Ll~gs~dg~I~iwD~~t~~-~i~~l~---~-----h~~-~I~s-v~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~ 712 (786)
.| +++-+.++.+++..--... ..+.+. . +.. .... ..++.+....+....+ .+.+.+....+.
T Consensus 138 ~G--ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~--- 212 (410)
T PF04841_consen 138 NG--IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ--- 212 (410)
T ss_pred CC--EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---
Confidence 33 4444455555554332221 111111 0 000 0000 2234444444444444 555444332211
Q ss_pred EccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEc--ccCCCeEEEEEcCCCC
Q 044075 713 LSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIA--AHDCVISALAQSPVTG 771 (786)
Q Consensus 713 l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~--~h~~~V~slafspdg~ 771 (786)
+ ...+++..+++||++++++.-..+|.+.|.+.+-.+..... .-......+.|+-++.
T Consensus 213 i-~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da 272 (410)
T PF04841_consen 213 I-DSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA 272 (410)
T ss_pred c-cCCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence 1 12468999999999999999999999999876555444222 2235566777775543
No 361
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.56 E-value=0.0096 Score=66.77 Aligned_cols=203 Identities=12% Similarity=0.141 Sum_probs=118.3
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec--C------CCCCCeEEEEEcc-----CC-
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP--D------DHNHIITDVRFRP-----NS- 563 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l--~------~h~~~V~sl~fsp-----dg- 563 (786)
.|.+..-+....++|++|+.|. =-++|.|..+|.+.|.|+.....+..- . .....|+++.|.- |+
T Consensus 75 gf~P~~l~~~~~g~vtal~~S~-iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~y 153 (395)
T PF08596_consen 75 GFLPLTLLDAKQGPVTALKNSD-IGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGY 153 (395)
T ss_dssp EEEEEEEE---S-SEEEEEE-B-TSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSS
T ss_pred ccCchhheeccCCcEeEEecCC-CcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcc
Confidence 3778888888899999999984 459999999999999999876666542 2 2345788999873 33
Q ss_pred --CEEEEEeCCCcEEEEcCC--C-Cccee---eeecCCCCCeEEEEEe-cCC--------------------CeEEEEEc
Q 044075 564 --TQLATSSFDKTVRIWDAA--K-PNFCL---QTYTGHNNHVMSLDFH-PKK--------------------NDLFCSCD 614 (786)
Q Consensus 564 --~~Lasgs~Dg~I~VWdl~--s-~~~~~---~~~~~h~~~V~sl~~s-p~g--------------------~~ll~sgs 614 (786)
-+|++|...|.+.+|.+. . +.+.+ .....+.+.|..|..- .+. +.+++.++
T Consensus 154 SSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvS 233 (395)
T PF08596_consen 154 SSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVS 233 (395)
T ss_dssp EEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-
T ss_pred cceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEc
Confidence 378899999999999874 1 22211 1223466777766632 221 22443444
Q ss_pred CCCcEEEEeCCCCeeeEe-ecCCeE--EEEE-----eCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCC----CCEEEE
Q 044075 615 GNSEIRFWNLSQYSCARI-SKGGTV--QVRF-----QPRLGLLLAAASENVVSIFDVETDRLTHSFKGHS----TEIHSV 682 (786)
Q Consensus 615 ~Dg~I~iwDl~~~~~~~~-~~~~i~--~i~~-----sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~----~~I~sv 682 (786)
+..|+++...+.+.... ++.... .+++ ...+..|++...+|.|++|.+-..+.+..+.-.. ..+...
T Consensus 234 -e~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~s 312 (395)
T PF08596_consen 234 -ESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSS 312 (395)
T ss_dssp -SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-
T ss_pred -ccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcccccccccc
Confidence 77899999887665443 333232 2333 2355678888899999999999988888776432 234456
Q ss_pred EEcCCCCEEEEEeCCeEEEE
Q 044075 683 CWDTNGEYLASVSQDSVRVW 702 (786)
Q Consensus 683 ~~spdg~~Lasgs~D~I~vw 702 (786)
+++++|+.++-.+...+.++
T Consensus 313 sis~~Gdi~~~~gpsE~~l~ 332 (395)
T PF08596_consen 313 SISRNGDIFYWTGPSEIQLF 332 (395)
T ss_dssp EE-TTS-EEEE-SSSEEEEE
T ss_pred EECCCCCEEEEeCcccEEEE
Confidence 77899998888877644433
No 362
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.53 E-value=0.0058 Score=66.79 Aligned_cols=163 Identities=13% Similarity=0.181 Sum_probs=101.2
Q ss_pred cEEEEeCCCCeeeEeec----CCeEEE---EEeC----CCCEEEEEEC---------C-CeEEEEEcCCC-----c--EE
Q 044075 618 EIRFWNLSQYSCARISK----GGTVQV---RFQP----RLGLLLAAAS---------E-NVVSIFDVETD-----R--LT 669 (786)
Q Consensus 618 ~I~iwDl~~~~~~~~~~----~~i~~i---~~sp----~g~~Ll~gs~---------d-g~I~iwD~~t~-----~--~i 669 (786)
.|++.|..+.+.+..+. ..+.++ .+.. ...++++|+. . |.|.+|++... + .+
T Consensus 3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i 82 (321)
T PF03178_consen 3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI 82 (321)
T ss_dssp EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence 45666666555443332 222322 2222 2456777664 2 88999999984 2 22
Q ss_pred EEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCe-eEEEEcc-CCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 670 HSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGE-CIHELSS-SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 670 ~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~-~i~~l~~-~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
.... ..++|++|+-- +.+|+++....|.+|++...+ .+..... ....+.++... ++++++|.....|.++...
T Consensus 83 ~~~~-~~g~V~ai~~~--~~~lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~ 157 (321)
T PF03178_consen 83 HSTE-VKGPVTAICSF--NGRLVVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYD 157 (321)
T ss_dssp EEEE-ESS-EEEEEEE--TTEEEEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEE
T ss_pred EEEe-ecCcceEhhhh--CCEEEEeecCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEE
Confidence 2222 57889998865 444777777799999998877 4433222 23356666555 5599999998888877544
Q ss_pred C--CeEEEEc--ccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 748 E--NKCMTIA--AHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 748 ~--~~~~~~~--~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
. .+...+. .....++++.|-+++..++.+..+|.|.++
T Consensus 158 ~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l 199 (321)
T PF03178_consen 158 EENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVL 199 (321)
T ss_dssp TTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEE
T ss_pred ccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEE
Confidence 3 3333322 335568899998666799999999999886
No 363
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.52 E-value=0.00033 Score=79.16 Aligned_cols=104 Identities=15% Similarity=0.196 Sum_probs=84.9
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeE-EEEEccCCCEEEEEeCCCcEEEE
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIIT-DVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~-sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
.++.....-...|.-+.|+|.-.+||++..+|.|.+..++ ...+.++.-|...++ +++|.|||+.|++|-.||+|++.
T Consensus 11 ~~~~~~~~l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~ 89 (665)
T KOG4640|consen 11 NETNGVMSLPINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLH 89 (665)
T ss_pred chhhhhhccccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEE
Confidence 3333444456678999999999999999999999999998 788888887777777 99999999999999999999999
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEec
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHP 604 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp 604 (786)
|++++.........-...|.++.|.+
T Consensus 90 Dve~~~~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 90 DVEKGGRLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred EccCCCceeccccccccchheeeccc
Confidence 99998754443344456777777763
No 364
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.51 E-value=0.019 Score=62.83 Aligned_cols=205 Identities=15% Similarity=0.103 Sum_probs=114.5
Q ss_pred cEEEEcCCCCcceeeeecCCCCCeEEEEEec---C---CCeEEEEEcC----------CCcEEEEeCCCC-----eeeE-
Q 044075 574 TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP---K---KNDLFCSCDG----------NSEIRFWNLSQY-----SCAR- 631 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp---~---g~~ll~sgs~----------Dg~I~iwDl~~~-----~~~~- 631 (786)
.|++.|..+.+............+.+++... + ...+++.|.. .|.|.++++... +...
T Consensus 3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i 82 (321)
T PF03178_consen 3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI 82 (321)
T ss_dssp EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence 4677777665532221112233455544322 1 1344444432 288999999884 3222
Q ss_pred ---eecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCc-EEEEEec-CCCCEEEEEEcCCCCEEEEEeCC-eEEEE--E
Q 044075 632 ---ISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDR-LTHSFKG-HSTEIHSVCWDTNGEYLASVSQD-SVRVW--S 703 (786)
Q Consensus 632 ---~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~-~i~~l~~-h~~~I~sv~~spdg~~Lasgs~D-~I~vw--D 703 (786)
..++.+.+++-. +++|+ ++.++.|.+|++...+ ....-.. ....+.++... +++|++|..- .|.++ +
T Consensus 83 ~~~~~~g~V~ai~~~--~~~lv-~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~ 157 (321)
T PF03178_consen 83 HSTEVKGPVTAICSF--NGRLV-VAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYD 157 (321)
T ss_dssp EEEEESS-EEEEEEE--TTEEE-EEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEE
T ss_pred EEEeecCcceEhhhh--CCEEE-EeecCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEE
Confidence 234777777655 44544 4445899999998887 4443331 33356666554 5588888765 66655 5
Q ss_pred CCCCeeEEEEc--cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC-------C--eEE--EEcccCCCeEEE---EEc
Q 044075 704 LASGECIHELS--SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE-------N--KCM--TIAAHDCVISAL---AQS 767 (786)
Q Consensus 704 l~s~~~i~~l~--~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~-------~--~~~--~~~~h~~~V~sl---afs 767 (786)
... ..+..+. .....++++.|-+++..++++..+|.|.++.... + +.. ........|+++ .+.
T Consensus 158 ~~~-~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~ 236 (321)
T PF03178_consen 158 EEN-NKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLI 236 (321)
T ss_dssp TTT-E-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS
T ss_pred ccC-CEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEee
Confidence 433 2222222 2345688888886667999999999999997763 2 222 233446678887 444
Q ss_pred CC--C------CEEEEEeCCCcEEE
Q 044075 768 PV--T------GMVASASHDKSVKI 784 (786)
Q Consensus 768 pd--g------~~LaSgs~DG~I~I 784 (786)
|. + ..++.++.+|.|-+
T Consensus 237 ~~~~~~~~~~~~~i~~~T~~G~Ig~ 261 (321)
T PF03178_consen 237 PRSGSSESPNRPQILYGTVDGSIGV 261 (321)
T ss_dssp --SSSS-TTEEEEEEEEETTS-EEE
T ss_pred ecCCCCcccccceEEEEecCCEEEE
Confidence 52 2 24778888998763
No 365
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.48 E-value=0.21 Score=55.12 Aligned_cols=226 Identities=10% Similarity=0.121 Sum_probs=118.9
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEcc--CCCEEEEEeC--------------------
Q 044075 514 CCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRP--NSTQLATSSF-------------------- 571 (786)
Q Consensus 514 ~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fsp--dg~~Lasgs~-------------------- 571 (786)
...++++.+.|+.......|+-.|+.+.+....+......+-...|.. |+..++-.-.
T Consensus 85 g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a 164 (386)
T PF14583_consen 85 GGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEA 164 (386)
T ss_dssp T-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC
T ss_pred ceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhh
Confidence 456678888887766677899999999888777777777776666643 5555443211
Q ss_pred --CCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcC------CCcEEEEeCCCCeeeEeec---CC-eEE
Q 044075 572 --DKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDG------NSEIRFWNLSQYSCARISK---GG-TVQ 639 (786)
Q Consensus 572 --Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~------Dg~I~iwDl~~~~~~~~~~---~~-i~~ 639 (786)
.+.|...|+.+++ ...+......+..+.|+|....+++-|-+ |..|.+.+........+.+ +. +..
T Consensus 165 ~p~~~i~~idl~tG~--~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gH 242 (386)
T PF14583_consen 165 RPHCRIFTIDLKTGE--RKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGH 242 (386)
T ss_dssp ---EEEEEEETTT----EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEE
T ss_pred CCCceEEEEECCCCc--eeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCccccc
Confidence 1234455666655 33344445678899999999999988753 2234444444333333222 11 122
Q ss_pred EEEeCCCCEEEEEEC-----CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-----------------
Q 044075 640 VRFQPRLGLLLAAAS-----ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----------------- 697 (786)
Q Consensus 640 i~~sp~g~~Ll~gs~-----dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----------------- 697 (786)
=-|.++|..+..-+. +..|.-+|+.+++...... ......+-.++||++++.-+.|
T Consensus 243 Efw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~--~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p 320 (386)
T PF14583_consen 243 EFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLME--MPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDP 320 (386)
T ss_dssp EEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEE--E-SEEEEEE-TTSSEEEEEE-------------------
T ss_pred ccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEe--CCceeeeEEcCCCCEEEecCCCCCccccccccceecCCc
Confidence 347899987666443 3467888998886543322 1234455567899988764433
Q ss_pred eEEEEECCCCeeEEEEccCC---------C--ceEEEEEeCCCCEEEEEEC-CCeEEEE
Q 044075 698 SVRVWSLASGECIHELSSSG---------N--KFHSCIFHPSYPTLMVIGG-YQSLELW 744 (786)
Q Consensus 698 ~I~vwDl~s~~~i~~l~~~~---------~--~I~sv~fspdg~~L~sgs~-dg~I~Iw 744 (786)
-|+++++..+.... +..|. . .--...|+||+++|+..+. .|...||
T Consensus 321 ~i~~~~~~~~~~~~-l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY 378 (386)
T PF14583_consen 321 WIYLFDVEAGRFRK-LARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVY 378 (386)
T ss_dssp EEEEEETTTTEEEE-EEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEE
T ss_pred EEEEeccccCceee-eeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEE
Confidence 35667887765432 11121 1 1235789999998777664 4554444
No 366
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.48 E-value=0.062 Score=60.86 Aligned_cols=217 Identities=12% Similarity=0.082 Sum_probs=122.9
Q ss_pred CeEEEEEccCCCEEEEE-eCCC----cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC----------C
Q 044075 553 IITDVRFRPNSTQLATS-SFDK----TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN----------S 617 (786)
Q Consensus 553 ~V~sl~fspdg~~Lasg-s~Dg----~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D----------g 617 (786)
.+..++++|++++||.+ +..| .|+|+|+.+++.....+... ....+.|.+++..++++...+ .
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~ 202 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR 202 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence 34568899999988865 3333 59999999987543333322 123499999999888776433 2
Q ss_pred cEEEEeCCCCeee--Eeec----CC-eEEEEEeCCCCEEEEEECC----CeEEEEEcCCC----cEEEEEecCCCCEEEE
Q 044075 618 EIRFWNLSQYSCA--RISK----GG-TVQVRFQPRLGLLLAAASE----NVVSIFDVETD----RLTHSFKGHSTEIHSV 682 (786)
Q Consensus 618 ~I~iwDl~~~~~~--~~~~----~~-i~~i~~sp~g~~Ll~gs~d----g~I~iwD~~t~----~~i~~l~~h~~~I~sv 682 (786)
.|++|++.+.... .++. .. ...+..+++++++++.... ..+++.|+... .....+..+...+...
T Consensus 203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~ 282 (414)
T PF02897_consen 203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYY 282 (414)
T ss_dssp EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEE
T ss_pred EEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEE
Confidence 3788888765322 3332 22 4678889999998876553 45888898874 2333333344444433
Q ss_pred EEcCCCCEEEEEeCC----eEEEEECCCCee---EEEEccCCCceEEEEEeCCCCEEEEEECC-C--eEEEEECC-CCeE
Q 044075 683 CWDTNGEYLASVSQD----SVRVWSLASGEC---IHELSSSGNKFHSCIFHPSYPTLMVIGGY-Q--SLELWNMA-ENKC 751 (786)
Q Consensus 683 ~~spdg~~Lasgs~D----~I~vwDl~s~~~---i~~l~~~~~~I~sv~fspdg~~L~sgs~d-g--~I~IwDl~-~~~~ 751 (786)
.-+..+.+++....+ .|...++..... ...+..+...+.-..+...+.+|+....+ + .|+++++. +...
T Consensus 283 v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~ 362 (414)
T PF02897_consen 283 VDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKES 362 (414)
T ss_dssp EEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEEE
T ss_pred EEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcEE
Confidence 323344454444343 566677776642 32444454433333333445556555543 3 78999999 5554
Q ss_pred EEEcc-cCCCeEEEEEcCCCC
Q 044075 752 MTIAA-HDCVISALAQSPVTG 771 (786)
Q Consensus 752 ~~~~~-h~~~V~slafspdg~ 771 (786)
..+.. -.+.|..+...+++.
T Consensus 363 ~~~~~p~~g~v~~~~~~~~~~ 383 (414)
T PF02897_consen 363 REIPLPEAGSVSGVSGDFDSD 383 (414)
T ss_dssp EEEESSSSSEEEEEES-TT-S
T ss_pred eeecCCcceEEeccCCCCCCC
Confidence 44332 234456665555554
No 367
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.36 E-value=0.025 Score=65.14 Aligned_cols=104 Identities=15% Similarity=0.184 Sum_probs=74.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeee-----eec-CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTE-----CTP-DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~-----~~l-~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
-.+.+..+..|++..++|.|+..|.|.|+-+...... ... +.|...|++++|++|+..|++|...|.|.+-.++
T Consensus 75 ~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~ 154 (726)
T KOG3621|consen 75 ATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELD 154 (726)
T ss_pred ccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEec
Confidence 4455677788999999999999999999987753211 111 3478899999999999999999999999998887
Q ss_pred CCc---ceeeeecCCCCCeEEEEEecCCCeEEEEE
Q 044075 582 KPN---FCLQTYTGHNNHVMSLDFHPKKNDLFCSC 613 (786)
Q Consensus 582 s~~---~~~~~~~~h~~~V~sl~~sp~g~~ll~sg 613 (786)
... .....+....+.|.-|++. ..+++++.
T Consensus 155 s~~~~~~~~q~il~~ds~IVQlD~~--q~~LLVSt 187 (726)
T KOG3621|consen 155 SRQAFLSKSQEILSEDSEIVQLDYL--QSYLLVST 187 (726)
T ss_pred hhhhhccccceeeccCcceEEeecc--cceehHhh
Confidence 621 1123344456778888876 24454443
No 368
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.32 E-value=0.052 Score=56.53 Aligned_cols=246 Identities=15% Similarity=0.150 Sum_probs=143.7
Q ss_pred EEEEcCCC-CEEEEEECCCe-EEEEEcCCCeeeeecCCCCC--CeEEEEEccCCCEEEEEeCC-----CcEEEEcCCCCc
Q 044075 514 CCHFSSDG-KLLASAGHDKK-VVVWNMENFQTECTPDDHNH--IITDVRFRPNSTQLATSSFD-----KTVRIWDAAKPN 584 (786)
Q Consensus 514 ~lafSpdg-~~Lasgs~Dg~-V~IWdl~t~~~~~~l~~h~~--~V~sl~fspdg~~Lasgs~D-----g~I~VWdl~s~~ 584 (786)
.|+|+|.- .-++.+-.-|+ ..++|........++...++ .--.=.|+|||.+|+..-.| |.|-|||.+..-
T Consensus 72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~f 151 (366)
T COG3490 72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGF 151 (366)
T ss_pred CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccccc
Confidence 46667643 33455544444 56778776655444322111 11123699999999876544 789999998665
Q ss_pred ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEE-eCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEc
Q 044075 585 FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFW-NLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDV 663 (786)
Q Consensus 585 ~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iw-Dl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~ 663 (786)
..+-.+..|.-....+.|.+||..+++. +|-|... |....+ |-.-+-.-.+.+.|.
T Consensus 152 qrvgE~~t~GiGpHev~lm~DGrtlvva---nGGIethpdfgR~~--------------------lNldsMePSlvlld~ 208 (366)
T COG3490 152 QRVGEFSTHGIGPHEVTLMADGRTLVVA---NGGIETHPDFGRTE--------------------LNLDSMEPSLVLLDA 208 (366)
T ss_pred ceecccccCCcCcceeEEecCCcEEEEe---CCceecccccCccc--------------------cchhhcCccEEEEec
Confidence 5566777787778889999999987755 3444443 221111 111122234555666
Q ss_pred CCCcEEEEEe----cCCCCEEEEEEcCCCCEEEEEeC-----C-eEEEEECCCCeeEEEEccC-------CCceEEEEEe
Q 044075 664 ETDRLTHSFK----GHSTEIHSVCWDTNGEYLASVSQ-----D-SVRVWSLASGECIHELSSS-------GNKFHSCIFH 726 (786)
Q Consensus 664 ~t~~~i~~l~----~h~~~I~sv~~spdg~~Lasgs~-----D-~I~vwDl~s~~~i~~l~~~-------~~~I~sv~fs 726 (786)
.++.++.+.. .+.-.|..++..+||..++.|-. | --.|=-...++.+.-+... ...|-+++.+
T Consensus 209 atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n 288 (366)
T COG3490 209 ATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAAN 288 (366)
T ss_pred cccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeec
Confidence 6665554322 25567889999999988877642 2 1222223344444444322 3457788888
Q ss_pred CCCCEEEEEECCC-eEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 727 PSYPTLMVIGGYQ-SLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 727 pdg~~L~sgs~dg-~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
.+...++..+-.| ...+||..++.++....-.+ +..++- ...-++..+.+|.|.++
T Consensus 289 ~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~d-aaGva~--~~~gf~vssg~G~~~~~ 345 (366)
T COG3490 289 RRDGLVALTSPRGNRAVIWDAATGAVVSEAALPD-AAGVAA--AKGGFAVSSGQGRIIFY 345 (366)
T ss_pred ccCCeEEEecCCCCeEEEEEcCCCcEEecccccc-ccccee--ccCceEEecCCceEEec
Confidence 7777777777666 67899999999875433221 122222 22334445556666643
No 369
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.25 E-value=0.11 Score=56.35 Aligned_cols=217 Identities=14% Similarity=0.108 Sum_probs=133.3
Q ss_pred EEcCCCCE-EEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc-eeee--ec
Q 044075 516 HFSSDGKL-LASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF-CLQT--YT 591 (786)
Q Consensus 516 afSpdg~~-Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~-~~~~--~~ 591 (786)
.|.++... +.+--..+.|.-|+..+++... +. +.+.+.++.....+..|+++.. -+.+++.+++.. .... ..
T Consensus 31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~-~~-~p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~ 106 (307)
T COG3386 31 VWDPDRGALLWVDILGGRIHRLDPETGKKRV-FP-SPGGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEPED 106 (307)
T ss_pred cCcCCCCEEEEEeCCCCeEEEecCCcCceEE-EE-CCCCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccccC
Confidence 46666664 4444567788899887654322 21 2233455555555555665543 367777755543 1111 11
Q ss_pred CC-CCCeEEEEEecCCCeEEEEEc-----CC-----CcEEEEeCCCCeeeEeecCC---eEEEEEeCCCCEEEEEECC-C
Q 044075 592 GH-NNHVMSLDFHPKKNDLFCSCD-----GN-----SEIRFWNLSQYSCARISKGG---TVQVRFQPRLGLLLAAASE-N 656 (786)
Q Consensus 592 ~h-~~~V~sl~~sp~g~~ll~sgs-----~D-----g~I~iwDl~~~~~~~~~~~~---i~~i~~sp~g~~Ll~gs~d-g 656 (786)
+. ....+.+...|+|...|-+.+ .+ |.|+.+|. .+..++..... ...++|+|+++.++++.+. +
T Consensus 107 ~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~ 185 (307)
T COG3386 107 GLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPAN 185 (307)
T ss_pred CCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCC
Confidence 11 245677888999886664444 11 33444443 45555555443 3569999999988888775 8
Q ss_pred eEEEEEcCC--C----cE-EEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCCCceEEEEEe-
Q 044075 657 VVSIFDVET--D----RL-THSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSGNKFHSCIFH- 726 (786)
Q Consensus 657 ~I~iwD~~t--~----~~-i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~~~I~sv~fs- 726 (786)
.|+.|++.. + +. ...+....+..-.++.+.+|.+.+++..+ .|.+|+.. ++.+..+..+...+++++|-
T Consensus 186 ~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG 264 (307)
T COG3386 186 RIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGG 264 (307)
T ss_pred eEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccceEeC
Confidence 888888762 1 11 22222345666778888999988655444 89999998 99999988887777888875
Q ss_pred CCCCEEEEEECC
Q 044075 727 PSYPTLMVIGGY 738 (786)
Q Consensus 727 pdg~~L~sgs~d 738 (786)
++.+.|++.+..
T Consensus 265 ~~~~~L~iTs~~ 276 (307)
T COG3386 265 PDLNTLYITSAR 276 (307)
T ss_pred CCcCEEEEEecC
Confidence 445666655543
No 370
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.24 E-value=0.16 Score=53.27 Aligned_cols=192 Identities=10% Similarity=0.070 Sum_probs=125.1
Q ss_pred eeeeecCC-CCCCeEEEEEccCCCEEEEEeCCC--cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCc
Q 044075 542 QTECTPDD-HNHIITDVRFRPNSTQLATSSFDK--TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSE 618 (786)
Q Consensus 542 ~~~~~l~~-h~~~V~sl~fspdg~~Lasgs~Dg--~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~ 618 (786)
+.+.++.. .......+.|..++.++-+.+.-| .|+.+|+.+++............-..|+.. ++.++...-.++.
T Consensus 34 ~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~--~d~l~qLTWk~~~ 111 (264)
T PF05096_consen 34 EVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL--GDKLYQLTWKEGT 111 (264)
T ss_dssp EEEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE--TTEEEEEESSSSE
T ss_pred EEEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE--CCEEEEEEecCCe
Confidence 34444432 233456788877887777777655 799999999874433333333334455555 4567767778999
Q ss_pred EEEEeCCCCeeeEeecC--CeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecC-----CCCEEEEEEcCCCCEE
Q 044075 619 IRFWNLSQYSCARISKG--GTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGH-----STEIHSVCWDTNGEYL 691 (786)
Q Consensus 619 I~iwDl~~~~~~~~~~~--~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h-----~~~I~sv~~spdg~~L 691 (786)
..+||..+.+.+..+.. .-..++ .++..|+.......|+++|..+.+....+... -..++.+.|- +|.+.
T Consensus 112 ~f~yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~Iy 188 (264)
T PF05096_consen 112 GFVYDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIY 188 (264)
T ss_dssp EEEEETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEE
T ss_pred EEEEccccceEEEEEecCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEE
Confidence 99999999888877653 333444 66778888888899999999988877766532 2345667775 66666
Q ss_pred EEEeCC-eEEEEECCCCeeEEEEcc---------------CCCceEEEEEeCCCCEEEEEECC
Q 044075 692 ASVSQD-SVRVWSLASGECIHELSS---------------SGNKFHSCIFHPSYPTLMVIGGY 738 (786)
Q Consensus 692 asgs~D-~I~vwDl~s~~~i~~l~~---------------~~~~I~sv~fspdg~~L~sgs~d 738 (786)
|-.-.. .|...|..+|+.+..+.. .......++++|....|++.|..
T Consensus 189 ANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~ 251 (264)
T PF05096_consen 189 ANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKL 251 (264)
T ss_dssp EEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT
T ss_pred EEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCC
Confidence 655544 899999999998877631 12457899999998888887764
No 371
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.21 E-value=0.05 Score=64.23 Aligned_cols=204 Identities=15% Similarity=0.128 Sum_probs=114.5
Q ss_pred CCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe------CCC--cEEEEcCCCCcceeeeecCCCCCeEEEE
Q 044075 530 DKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS------FDK--TVRIWDAAKPNFCLQTYTGHNNHVMSLD 601 (786)
Q Consensus 530 Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs------~Dg--~I~VWdl~s~~~~~~~~~~h~~~V~sl~ 601 (786)
+|.+.-.+-.....+.-..+....+.+.+++|+++.++... .|. .|.+++.... ......+. ..+.-.
T Consensus 328 ~G~l~~~~~~~~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~--~~~lt~g~--~~t~Ps 403 (591)
T PRK13616 328 DGSLVSVDGQGVTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGV--AVQVLEGH--SLTRPS 403 (591)
T ss_pred CCeEEEecCCCeeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCc--ceeeecCC--CCCCce
Confidence 56555443222222222223334688999999999887665 244 4555554222 22223332 378889
Q ss_pred EecCCCeEEEEEcC-----------CCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEE---EEcCCCc
Q 044075 602 FHPKKNDLFCSCDG-----------NSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSI---FDVETDR 667 (786)
Q Consensus 602 ~sp~g~~ll~sgs~-----------Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~i---wD~~t~~ 667 (786)
|+|++..+.+.... .+.+.+.+++.++....+.+.+..+.|+|||..++... ++.|++ -....+.
T Consensus 404 WspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~ 482 (591)
T PRK13616 404 WSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ 482 (591)
T ss_pred ECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc
Confidence 99998766644322 23454445555444334457799999999999988877 477777 4444443
Q ss_pred E-E---EEEe-cCCCCEEEEEEcCCCCEEEEEeCC---eEEEEECCCCeeEEEEcc--CCCceEEEEEeCCCCEEEEEEC
Q 044075 668 L-T---HSFK-GHSTEIHSVCWDTNGEYLASVSQD---SVRVWSLASGECIHELSS--SGNKFHSCIFHPSYPTLMVIGG 737 (786)
Q Consensus 668 ~-i---~~l~-~h~~~I~sv~~spdg~~Lasgs~D---~I~vwDl~s~~~i~~l~~--~~~~I~sv~fspdg~~L~sgs~ 737 (786)
. + ..+. .-...+.++.|..++.++ ++..+ .+...++.... ...+.. ...++..++-.+. .+++...
T Consensus 483 ~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~-~~~~~~~n~~~~v~~vaa~~~--~iyv~~~ 558 (591)
T PRK13616 483 YALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSN-SDALPSRNLSAPVVAVAASPS--TVYVTDA 558 (591)
T ss_pred eeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEecCCcc-ccccCCCCccCceEEEecCCc--eEEEEcC
Confidence 1 1 1122 233346889999999866 44444 34444444222 111122 2455666666653 4666666
Q ss_pred CCeEE
Q 044075 738 YQSLE 742 (786)
Q Consensus 738 dg~I~ 742 (786)
++.+.
T Consensus 559 ~g~~~ 563 (591)
T PRK13616 559 RAVLQ 563 (591)
T ss_pred CceEE
Confidence 66443
No 372
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=97.14 E-value=0.69 Score=52.14 Aligned_cols=260 Identities=12% Similarity=0.165 Sum_probs=147.6
Q ss_pred CCCEEEEEECCCeEEEEEcCCCee----eeecCCCCCCeEEEEEcc-----CCCEEEEEeCCCcEEEEcCCCCc------
Q 044075 520 DGKLLASAGHDKKVVVWNMENFQT----ECTPDDHNHIITDVRFRP-----NSTQLATSSFDKTVRIWDAAKPN------ 584 (786)
Q Consensus 520 dg~~Lasgs~Dg~V~IWdl~t~~~----~~~l~~h~~~V~sl~fsp-----dg~~Lasgs~Dg~I~VWdl~s~~------ 584 (786)
+...|++|+..|.++||+...... +..-..-..+|..|..-. +...||+ -.-..+.||.+....
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~g 114 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEHG 114 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCcccC
Confidence 346899999999999999754321 111123456788777543 2234444 445778888773211
Q ss_pred --ceeeeecCCC--CCeEEEEEecC----CCeEEEEEcCCCcEEEEeCCCCeeeEeecC--CeEEEEEeCCCCEEEEEEC
Q 044075 585 --FCLQTYTGHN--NHVMSLDFHPK----KNDLFCSCDGNSEIRFWNLSQYSCARISKG--GTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 585 --~~~~~~~~h~--~~V~sl~~sp~----g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~--~i~~i~~sp~g~~Ll~gs~ 654 (786)
..+.....|. .....+++-|- ++.++|.=+-||.+.+|+-+.....+.+.+ -...++|.+..+.|++++.
T Consensus 115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgPl~Y~~~tDsfvt~ss 194 (418)
T PF14727_consen 115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGPLCYCPRTDSFVTASS 194 (418)
T ss_pred cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcCeEEeecCCEEEEecC
Confidence 1222233332 23344444332 357888889999999999887665555443 2345788888899999999
Q ss_pred CCeEEEEEcCCC--------------------c---EEEEEecCCCCEEEE---EEcCCCCEEEEEeCCeEEEEECCCCe
Q 044075 655 ENVVSIFDVETD--------------------R---LTHSFKGHSTEIHSV---CWDTNGEYLASVSQDSVRVWSLASGE 708 (786)
Q Consensus 655 dg~I~iwD~~t~--------------------~---~i~~l~~h~~~I~sv---~~spdg~~Lasgs~D~I~vwDl~s~~ 708 (786)
+..|..|....- + +-.++. -...+..| .++.....+++-++.++.+.+. +|.
T Consensus 195 s~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~n-lGE~~l~i~v~~~~~~~~~IvvLger~Lf~l~~-~G~ 272 (418)
T PF14727_consen 195 SWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFN-LGEQALDIQVVRFSSSESDIVVLGERSLFCLKD-NGS 272 (418)
T ss_pred ceeEEEecHHHhhhccccccccccccccccccccccceeEEE-CCceeEEEEEEEcCCCCceEEEEecceEEEEcC-CCe
Confidence 888888865211 0 111111 22333333 3333445666667667777765 454
Q ss_pred eEEEEccCCCceEEEEEeC----CC---CEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEE---EcCCCCEEEEEeC
Q 044075 709 CIHELSSSGNKFHSCIFHP----SY---PTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALA---QSPVTGMVASASH 778 (786)
Q Consensus 709 ~i~~l~~~~~~I~sv~fsp----dg---~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~sla---fspdg~~LaSgs~ 778 (786)
.....+-.-.+...+.|.. ++ ..+++++.++.+.||.=.+-....-..| .+| +|. |..-...|++-+.
T Consensus 273 l~~~krLd~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d~~L~WsA~l~~-~PV-al~v~~~~~~~G~IV~Ls~ 350 (418)
T PF14727_consen 273 LRFQKRLDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYEDTTLVWSAQLPH-VPV-ALSVANFNGLKGLIVSLSD 350 (418)
T ss_pred EEEEEecCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEeCCeEEEecCCCC-CCE-EEEecccCCCCceEEEEcC
Confidence 4433333222222222222 22 2488999999999986433222211111 222 333 3334558888888
Q ss_pred CCcEEE
Q 044075 779 DKSVKI 784 (786)
Q Consensus 779 DG~I~I 784 (786)
+|.|.+
T Consensus 351 ~G~L~v 356 (418)
T PF14727_consen 351 EGQLSV 356 (418)
T ss_pred CCcEEE
Confidence 998865
No 373
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.13 E-value=0.0012 Score=45.51 Aligned_cols=38 Identities=34% Similarity=0.627 Sum_probs=34.1
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWN 537 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWd 537 (786)
.++..+..|...|.++.|++++.++++++.|+.|++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 45667778999999999999999999999999999996
No 374
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.13 E-value=0.041 Score=64.97 Aligned_cols=182 Identities=10% Similarity=0.099 Sum_probs=108.8
Q ss_pred CCeEEEEEecCCCeEEEEEc-----CC--CcEEEEeCCCCeeeEeec-CCeEEEEEeCCCCEEEEEECC-----------
Q 044075 595 NHVMSLDFHPKKNDLFCSCD-----GN--SEIRFWNLSQYSCARISK-GGTVQVRFQPRLGLLLAAASE----------- 655 (786)
Q Consensus 595 ~~V~sl~~sp~g~~ll~sgs-----~D--g~I~iwDl~~~~~~~~~~-~~i~~i~~sp~g~~Ll~gs~d----------- 655 (786)
..+.+.+++|++..++++.. .| ..|.+++..... ..... .....-.|+|+|+.+++....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~-~~lt~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~ 428 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVA-VQVLEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPA 428 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcc-eeeecCCCCCCceECCCCCceEEEecCcceEEEeccCC
Confidence 46789999999998887762 23 356666653322 22222 346678899998877776533
Q ss_pred -CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEE---EECCCCe-eE---EEEcc-CCCceEEEEEe
Q 044075 656 -NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRV---WSLASGE-CI---HELSS-SGNKFHSCIFH 726 (786)
Q Consensus 656 -g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~v---wDl~s~~-~i---~~l~~-~~~~I~sv~fs 726 (786)
+.+++.+++.++... .....|..+.|+|||..|+....+.|.| -....|+ .+ ..+.. ....+.++.|.
T Consensus 429 ~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~ 505 (591)
T PRK13616 429 TGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMIIGGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWR 505 (591)
T ss_pred CceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEECCEEEEEEEEeCCCCceeecccEEeecccCCccccceEe
Confidence 233334444433322 2356799999999999998877666666 4444454 11 11222 23346889999
Q ss_pred CCCCEEEEEECCCe--EEEEECCCCeEEEEcc--cCCCeEEEEEcCCCCEEEEEeCCCcEE
Q 044075 727 PSYPTLMVIGGYQS--LELWNMAENKCMTIAA--HDCVISALAQSPVTGMVASASHDKSVK 783 (786)
Q Consensus 727 pdg~~L~sgs~dg~--I~IwDl~~~~~~~~~~--h~~~V~slafspdg~~LaSgs~DG~I~ 783 (786)
.++.. +++..++. ++..++.......+.. ....+.+|+-++. .|+.+..+|.+.
T Consensus 506 ~~~~L-~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~--~iyv~~~~g~~~ 563 (591)
T PRK13616 506 TGDSL-VVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS--TVYVTDARAVLQ 563 (591)
T ss_pred cCCEE-EEEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc--eEEEEcCCceEE
Confidence 99884 45555543 4444454333222222 3667888887763 455556666554
No 375
>PRK10115 protease 2; Provisional
Probab=97.09 E-value=0.49 Score=57.25 Aligned_cols=198 Identities=8% Similarity=0.014 Sum_probs=105.6
Q ss_pred CCeEEEEEccCCCEEEEEeCC-----CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC-----CcEEE
Q 044075 552 HIITDVRFRPNSTQLATSSFD-----KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN-----SEIRF 621 (786)
Q Consensus 552 ~~V~sl~fspdg~~Lasgs~D-----g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D-----g~I~i 621 (786)
-.+..+.|+||+++|+.+... ..|++.|+.++..+...+.+- -..++|.++++.++++...+ ..|+.
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~---~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~ 203 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV---EPSFVWANDSWTFYYVRKHPVTLLPYQVWR 203 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc---ceEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence 457788999999988876432 358888998765322333221 15699999998888776533 46888
Q ss_pred EeCCCC--eeeEeecC--C-eE-EEEEeCCCCEEEEEECC---CeEEEEEcC--CCcEEEEEecCCCCEEEEEEcCCCCE
Q 044075 622 WNLSQY--SCARISKG--G-TV-QVRFQPRLGLLLAAASE---NVVSIFDVE--TDRLTHSFKGHSTEIHSVCWDTNGEY 690 (786)
Q Consensus 622 wDl~~~--~~~~~~~~--~-i~-~i~~sp~g~~Ll~gs~d---g~I~iwD~~--t~~~i~~l~~h~~~I~sv~~spdg~~ 690 (786)
+++.+. +...++.. . .. .+..+.+++++++.+.. +.+.+++.. ++.....+.........+. +..+.+
T Consensus 204 h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l 282 (686)
T PRK10115 204 HTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-HYQHRF 282 (686)
T ss_pred EECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-eCCCEE
Confidence 888876 33333331 2 22 22334477777666553 578888853 3332222221222222222 333333
Q ss_pred EEEEeCC--e--EEEEECCCCeeEEEEccC--CCceEEEEEeCCCCEEEEEECCC--eEEEEECCCCeEEEE
Q 044075 691 LASVSQD--S--VRVWSLASGECIHELSSS--GNKFHSCIFHPSYPTLMVIGGYQ--SLELWNMAENKCMTI 754 (786)
Q Consensus 691 Lasgs~D--~--I~vwDl~s~~~i~~l~~~--~~~I~sv~fspdg~~L~sgs~dg--~I~IwDl~~~~~~~~ 754 (786)
++....+ . |...++........+..+ ...|..+.+..+ ..+++...++ .|++++..++....+
T Consensus 283 y~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-~l~~~~~~~g~~~l~~~~~~~~~~~~l 353 (686)
T PRK10115 283 YLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTD-WLVVEERQRGLTSLRQINRKTREVIGI 353 (686)
T ss_pred EEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECC-EEEEEEEeCCEEEEEEEcCCCCceEEe
Confidence 3333322 3 444455421112233333 236777777732 3444444455 456666654444433
No 376
>smart00667 LisH Lissencephaly type-1-like homology motif. Alpha-helical motif present in Lis1, treacle, Nopp140, some katanin p60 subunits, muskelin, tonneau, LEUNIG and numerous WD40 repeat-containing proteins. It is suggested that LisH motifs contribute to the regulation of microtubule dynamics, either by mediating dimerisation, or else by binding cytoplasmic dynein heavy chain or microtubules directly.
Probab=97.00 E-value=0.00091 Score=46.83 Aligned_cols=31 Identities=23% Similarity=0.437 Sum_probs=28.4
Q ss_pred HHhHHHHHHHHhhcCCcHHHHHHHHhcCCCC
Q 044075 11 DKMLDVYIYDYLVKKKLHNTAKSFMTEGKVA 41 (786)
Q Consensus 11 ~~~l~~yiydy~~k~~~~~~a~~~~~e~~~~ 41 (786)
+..|+..|++||.+.|+.++|++|.+|.++.
T Consensus 3 ~~~l~~lI~~yL~~~g~~~ta~~l~~e~~~~ 33 (34)
T smart00667 3 RSELNRLILEYLLRNGYEETAETLQKESGLS 33 (34)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHhCCC
Confidence 5679999999999999999999999998874
No 377
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.99 E-value=0.038 Score=66.40 Aligned_cols=138 Identities=9% Similarity=0.122 Sum_probs=92.2
Q ss_pred CEEEEE-eCCCcEEEEcCCCCcceeeeecCCCCC-eEEEEEec-----CCCeEEEEEcCCCcEEEEeCCCCe--eeEe-e
Q 044075 564 TQLATS-SFDKTVRIWDAAKPNFCLQTYTGHNNH-VMSLDFHP-----KKNDLFCSCDGNSEIRFWNLSQYS--CARI-S 633 (786)
Q Consensus 564 ~~Lasg-s~Dg~I~VWdl~s~~~~~~~~~~h~~~-V~sl~~sp-----~g~~ll~sgs~Dg~I~iwDl~~~~--~~~~-~ 633 (786)
++|+.. .....|+-.|++.++ ++..+..|... |..++-.. +....| .|-.+..|..||.+-.. ++.. .
T Consensus 494 ~mil~~~~~~~~ly~mDLe~GK-VV~eW~~~~~~~v~~~~p~~K~aqlt~e~tf-lGls~n~lfriDpR~~~~k~v~~~~ 571 (794)
T PF08553_consen 494 NMILLDPNNPNKLYKMDLERGK-VVEEWKVHDDIPVVDIAPDSKFAQLTNEQTF-LGLSDNSLFRIDPRLSGNKLVDSQS 571 (794)
T ss_pred ceEeecCCCCCceEEEecCCCc-EEEEeecCCCcceeEecccccccccCCCceE-EEECCCceEEeccCCCCCceeeccc
Confidence 344433 345778888999988 57777666543 55554321 122334 56668899999998632 2211 1
Q ss_pred -----cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEEC
Q 044075 634 -----KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSL 704 (786)
Q Consensus 634 -----~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl 704 (786)
+....|++- ...++|++|+.+|.|++||--..+....+.+-..+|.+|+.+.||++|++.+...+.+++.
T Consensus 572 k~Y~~~~~Fs~~aT-t~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi~t 646 (794)
T PF08553_consen 572 KQYSSKNNFSCFAT-TEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLIDT 646 (794)
T ss_pred cccccCCCceEEEe-cCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEEEE
Confidence 122334443 4457899999999999999543333334556789999999999999999998888888775
No 378
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=96.94 E-value=0.69 Score=49.13 Aligned_cols=216 Identities=15% Similarity=0.141 Sum_probs=130.2
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcC-------CCeeeeecCC-----CCCCeEEEEEccCCC------------EE
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNME-------NFQTECTPDD-----HNHIITDVRFRPNST------------QL 566 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~-------t~~~~~~l~~-----h~~~V~sl~fspdg~------------~L 566 (786)
.-+.|+|+|.+.+-++....+...+||.. ....+.++.. .....+.+.|+.... .+
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F 103 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF 103 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence 35789999999888888788999999986 1122333321 234678888875332 36
Q ss_pred EEEeCCCcEEEEcCCCCcc----eeeeec-CCCCCe-EEEEEec--CCCeEEEEEcCCCcEEEEeCCCCeeeE--eecC-
Q 044075 567 ATSSFDKTVRIWDAAKPNF----CLQTYT-GHNNHV-MSLDFHP--KKNDLFCSCDGNSEIRFWNLSQYSCAR--ISKG- 635 (786)
Q Consensus 567 asgs~Dg~I~VWdl~s~~~----~~~~~~-~h~~~V-~sl~~sp--~g~~ll~sgs~Dg~I~iwDl~~~~~~~--~~~~- 635 (786)
+.+++||+|.-|...-... ....+. .....| ..+++.. .++.|+++--..++|.+||-.-..... .+..
T Consensus 104 if~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP 183 (336)
T TIGR03118 104 LFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDP 183 (336)
T ss_pred EEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCC
Confidence 7889999999998533221 112222 112333 3455543 356677666678999999865332211 0111
Q ss_pred ---------------CeEEEEE---eCCCCEEEEEECCCeEEEEEcCCCcEEEEEe--cCCCCEEEEEEcC------CCC
Q 044075 636 ---------------GTVQVRF---QPRLGLLLAAASENVVSIFDVETDRLTHSFK--GHSTEIHSVCWDT------NGE 689 (786)
Q Consensus 636 ---------------~i~~i~~---sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~--~h~~~I~sv~~sp------dg~ 689 (786)
...-+.| .++...=+.+.--|.|.+||.. +..++++. +.-..-+.|+..| .+.
T Consensus 184 ~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG~~sg~ 262 (336)
T TIGR03118 184 ALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFGSLSGA 262 (336)
T ss_pred CCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhCCCCCC
Confidence 1111111 2222223333445789999986 66777664 2334455677655 467
Q ss_pred EEEEEeCC-eEEEEECCCCeeEEEEccCCC------ceEEEEEeC
Q 044075 690 YLASVSQD-SVRVWSLASGECIHELSSSGN------KFHSCIFHP 727 (786)
Q Consensus 690 ~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~------~I~sv~fsp 727 (786)
+|+.--.| +|..||..+++.+..+....+ .++.+.|..
T Consensus 263 lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 263 LLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred eEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 77766667 999999999998888776543 245666654
No 379
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.88 E-value=0.26 Score=50.09 Aligned_cols=202 Identities=12% Similarity=0.106 Sum_probs=111.1
Q ss_pred CCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEec-CCC-eEEEEEcCCCcEEEEeCCCC--eeeEee-----
Q 044075 563 STQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP-KKN-DLFCSCDGNSEIRFWNLSQY--SCARIS----- 633 (786)
Q Consensus 563 g~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp-~g~-~ll~sgs~Dg~I~iwDl~~~--~~~~~~----- 633 (786)
+.++.+--..+.|.-||+.....-...+.+. ++.++.+-- ++. ...+.|+..-.|.-||.... ...+..
T Consensus 27 ~sLl~VDi~ag~v~r~D~~qn~v~ra~ie~p--~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~~ 104 (310)
T KOG4499|consen 27 QSLLYVDIEAGEVHRYDIEQNKVYRAKIEGP--PSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFEVQP 104 (310)
T ss_pred ceEEEEEeccCceehhhhhhhheEEEEEecC--cceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeeccccCc
Confidence 3455555556777779988765333333332 133333321 222 34445555555666874432 222221
Q ss_pred ---cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCC--------CCEEEEEEcCCCCEEEEE-eCC-eEE
Q 044075 634 ---KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHS--------TEIHSVCWDTNGEYLASV-SQD-SVR 700 (786)
Q Consensus 634 ---~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~--------~~I~sv~~spdg~~Lasg-s~D-~I~ 700 (786)
+.....-..+|+|+++.-.-.|-. .++....+.+..-+.+|. .--+.++|+.+.+.+... +.+ +|.
T Consensus 105 d~kknR~NDgkvdP~Gryy~GtMad~~-~~le~~~g~Ly~~~~~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~ 183 (310)
T KOG4499|consen 105 DRKKNRLNDGKVDPDGRYYGGTMADFG-DDLEPIGGELYSWLAGHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVD 183 (310)
T ss_pred hHHhcccccCccCCCCceeeeeecccc-ccccccccEEEEeccCCCceeeehhccCCccccccccCcEEEEEccCceEEe
Confidence 123344567899988433322211 122222233333333332 223568898888766554 445 787
Q ss_pred EEE--CCCC-----eeEEEEccC----CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEc
Q 044075 701 VWS--LASG-----ECIHELSSS----GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQS 767 (786)
Q Consensus 701 vwD--l~s~-----~~i~~l~~~----~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafs 767 (786)
-|| ..+| +.+..++.. .-..-.+++..+|...+++-..++|..+|..+++.+ ++.-....|+|++|-
T Consensus 184 a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFg 262 (310)
T KOG4499|consen 184 AYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFG 262 (310)
T ss_pred eeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEec
Confidence 787 4444 333333321 111234556778888888888889999999999987 455567889999997
No 380
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=96.88 E-value=0.0025 Score=43.75 Aligned_cols=38 Identities=34% Similarity=0.551 Sum_probs=33.7
Q ss_pred eeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 542 QTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 542 ~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
+....+..|...|.++.|.+++..+++++.|+.|++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 45566678889999999999999999999999999996
No 381
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=96.82 E-value=1.2 Score=53.63 Aligned_cols=214 Identities=11% Similarity=0.093 Sum_probs=132.0
Q ss_pred EEEEEeCCCcEEEEcCCCCcc-eeeeecCCCCCeEEEEEecCCCeEEEEEcCC--------------CcEEEEeCCCCee
Q 044075 565 QLATSSFDKTVRIWDAAKPNF-CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN--------------SEIRFWNLSQYSC 629 (786)
Q Consensus 565 ~Lasgs~Dg~I~VWdl~s~~~-~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D--------------g~I~iwDl~~~~~ 629 (786)
.|+++. .+.+++.-++.-.. ..++.. -......+++.+..- ++.+.+.. ..++++|-++.+.
T Consensus 686 ~l~~~~-~~~l~i~tid~iqkl~irtvp-l~~~prrI~~q~~sl-~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~v 762 (1096)
T KOG1897|consen 686 SLASAN-GGALTIGTIDEIQKLHIRTVP-LGESPRRICYQESSL-TFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEV 762 (1096)
T ss_pred eEEEec-CCceEEEEecchhhcceeeec-CCCChhheEecccce-EEEEEecccccchhhcCCcceEEEEEEecCCceeE
Confidence 344444 45677776654222 233322 334567777776333 33233211 2477888888877
Q ss_pred eEeec-------CCeEEEEEeCC-CCEEEEEEC----------CCeEEEEEcCCCcEEEEEec--CCCCEEEEEEcCCCC
Q 044075 630 ARISK-------GGTVQVRFQPR-LGLLLAAAS----------ENVVSIFDVETDRLTHSFKG--HSTEIHSVCWDTNGE 689 (786)
Q Consensus 630 ~~~~~-------~~i~~i~~sp~-g~~Ll~gs~----------dg~I~iwD~~t~~~i~~l~~--h~~~I~sv~~spdg~ 689 (786)
+..++ ..+.++.|..| +.++++|+. .|.|.+|.......+..... -.+.+.+++. -+|+
T Consensus 763 l~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~-fngk 841 (1096)
T KOG1897|consen 763 LSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVE-FNGK 841 (1096)
T ss_pred EeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhh-hCCe
Confidence 76655 22344557777 667777763 47888888877433332222 2344555543 3566
Q ss_pred EEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEE--EECCCCeEEE--EcccCCCeEEEE
Q 044075 690 YLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLEL--WNMAENKCMT--IAAHDCVISALA 765 (786)
Q Consensus 690 ~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~I--wDl~~~~~~~--~~~h~~~V~sla 765 (786)
++|. =...|++|++.+.+.++.-..+..++..+...-.+..+++|..-++|.+ |+...+.... ...+...++++.
T Consensus 842 llA~-In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evArD~~p~Wmtave 920 (1096)
T KOG1897|consen 842 LLAG-INQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVARDYNPNWMTAVE 920 (1096)
T ss_pred EEEe-cCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEeehhhCccceeeEE
Confidence 6543 2338999999998777777778889999999999999999998886665 4555544543 345778888888
Q ss_pred EcCCCCEEEEEeCCCcEEE
Q 044075 766 QSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 766 fspdg~~LaSgs~DG~I~I 784 (786)
+-.+..++. +..+|.+.+
T Consensus 921 il~~d~ylg-ae~~gNlf~ 938 (1096)
T KOG1897|consen 921 ILDDDTYLG-AENSGNLFT 938 (1096)
T ss_pred EecCceEEe-ecccccEEE
Confidence 876665554 445555543
No 382
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=96.82 E-value=0.46 Score=53.49 Aligned_cols=88 Identities=23% Similarity=0.288 Sum_probs=56.0
Q ss_pred EEEEcCCCCEEEEEECCCeEEE---EEcCC-C----eeeeec--C-CCC--CCeEEEEEcc-----------CCCEEEEE
Q 044075 514 CCHFSSDGKLLASAGHDKKVVV---WNMEN-F----QTECTP--D-DHN--HIITDVRFRP-----------NSTQLATS 569 (786)
Q Consensus 514 ~lafSpdg~~Lasgs~Dg~V~I---Wdl~t-~----~~~~~l--~-~h~--~~V~sl~fsp-----------dg~~Lasg 569 (786)
+++.+|++++||.+..+..|.+ |+... + ...... . .+. ..|+++.|-| |...+++|
T Consensus 6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG 85 (415)
T PF14655_consen 6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG 85 (415)
T ss_pred eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence 5688999999999987776665 54321 1 111111 1 121 5788777654 35689999
Q ss_pred eCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEe
Q 044075 570 SFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFH 603 (786)
Q Consensus 570 s~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~s 603 (786)
..+|.|++|... +. .+..-.-|..+|..|.+.
T Consensus 86 ~ssG~vrfyte~-G~-LL~~Q~~h~~pV~~ik~~ 117 (415)
T PF14655_consen 86 TSSGYVRFYTEN-GV-LLLSQLLHEEPVLKIKCR 117 (415)
T ss_pred ecccEEEEEecc-ch-HHHHHhcCccceEEEEec
Confidence 999999999863 33 233333466777777664
No 383
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=96.80 E-value=0.23 Score=56.75 Aligned_cols=119 Identities=10% Similarity=0.093 Sum_probs=79.6
Q ss_pred CCCeEEEEEcCC----CCEEEEEECCCeEEEEEcC-----CCeeeeecCC-C--CCC--eEEEEEccCCCEEEEEeCCCc
Q 044075 509 SSKVTCCHFSSD----GKLLASAGHDKKVVVWNME-----NFQTECTPDD-H--NHI--ITDVRFRPNSTQLATSSFDKT 574 (786)
Q Consensus 509 ~~~V~~lafSpd----g~~Lasgs~Dg~V~IWdl~-----t~~~~~~l~~-h--~~~--V~sl~fspdg~~Lasgs~Dg~ 574 (786)
-..|..+.|.|- ...|.+.-....|.||-+. ..+.+..-.. . .-+ -..+.|+|....|++-.....
T Consensus 56 FEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dv 135 (671)
T PF15390_consen 56 FEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDV 135 (671)
T ss_pred cceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCce
Confidence 345899999984 3345555678899999875 2222211111 1 111 235789999988877766555
Q ss_pred EEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC
Q 044075 575 VRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY 627 (786)
Q Consensus 575 I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~ 627 (786)
-.++++......++.-....+.|.|.+|.+||..++++.+..=.-++||-...
T Consensus 136 SV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qK 188 (671)
T PF15390_consen 136 SVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQK 188 (671)
T ss_pred eEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchh
Confidence 56667765544444444556889999999999999988887777889986543
No 384
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.77 E-value=0.029 Score=62.67 Aligned_cols=130 Identities=13% Similarity=0.152 Sum_probs=90.2
Q ss_pred EEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCE--------EEEEeCCeEEEEECCCC-e-eEEEEccC--
Q 044075 649 LLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEY--------LASVSQDSVRVWSLASG-E-CIHELSSS-- 716 (786)
Q Consensus 649 Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~--------Lasgs~D~I~vwDl~s~-~-~i~~l~~~-- 716 (786)
|..+.....|+-.|++.|+.+..++-+.. |+-+.+.|+.+. |+.-+...|.-||.+-. . .+.....|
T Consensus 349 l~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy 427 (644)
T KOG2395|consen 349 LMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQY 427 (644)
T ss_pred eeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecccc
Confidence 33444557899999999999999987665 777888886542 33334448999998832 2 22222222
Q ss_pred --CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeE-EEEcccCCCeEEEEEcCCCCEEEEEeCCC
Q 044075 717 --GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKC-MTIAAHDCVISALAQSPVTGMVASASHDK 780 (786)
Q Consensus 717 --~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~-~~~~~h~~~V~slafspdg~~LaSgs~DG 780 (786)
.....|++-..+ .+|++|+.+|.|++||-..... ..+.+-..+|..|..+.+|++|++.+..-
T Consensus 428 ~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~ty 493 (644)
T KOG2395|consen 428 STKNNFSCFATTES-GYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCKTY 493 (644)
T ss_pred ccccccceeeecCC-ceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecccE
Confidence 233445554444 5799999999999999733322 25678889999999999999888776543
No 385
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.77 E-value=0.022 Score=68.30 Aligned_cols=126 Identities=13% Similarity=0.133 Sum_probs=87.4
Q ss_pred CCCeEEEEEcCCCcEEEEEecCCCC-EEEEEEcC------CCCEEEEEeCCeEEEEECCCC--eeEEE-E--ccCCCceE
Q 044075 654 SENVVSIFDVETDRLTHSFKGHSTE-IHSVCWDT------NGEYLASVSQDSVRVWSLASG--ECIHE-L--SSSGNKFH 721 (786)
Q Consensus 654 ~dg~I~iwD~~t~~~i~~l~~h~~~-I~sv~~sp------dg~~Lasgs~D~I~vwDl~s~--~~i~~-l--~~~~~~I~ 721 (786)
....|+-.|++.|+.+..+..|... |..++=.. +...|+.-+.+.+..||.+-. +++.. . -.....+.
T Consensus 502 ~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs 581 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFS 581 (794)
T ss_pred CCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCce
Confidence 3578999999999999999987654 55554221 123344444449999999863 23321 1 12345567
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCC
Q 044075 722 SCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDK 780 (786)
Q Consensus 722 sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG 780 (786)
|++-+.+| +|++|+.+|.|++||--..... .+.+-..+|.+|..+.||++|++.|..-
T Consensus 582 ~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~ty 640 (794)
T PF08553_consen 582 CFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKTY 640 (794)
T ss_pred EEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecce
Confidence 77666655 6999999999999995433322 4556789999999999999888776543
No 386
>PHA02713 hypothetical protein; Provisional
Probab=96.75 E-value=0.13 Score=60.73 Aligned_cols=214 Identities=10% Similarity=0.091 Sum_probs=107.8
Q ss_pred eEEEEEcCCCeeee--ecCCCCCCeEEEEEccCCCEEEEEeCC------CcEEEEcCCCCcceee-eecCCCCCeEEEEE
Q 044075 532 KVVVWNMENFQTEC--TPDDHNHIITDVRFRPNSTQLATSSFD------KTVRIWDAAKPNFCLQ-TYTGHNNHVMSLDF 602 (786)
Q Consensus 532 ~V~IWdl~t~~~~~--~l~~h~~~V~sl~fspdg~~Lasgs~D------g~I~VWdl~s~~~~~~-~~~~h~~~V~sl~~ 602 (786)
.+..||..+.+-.. .+...... .+++. -++.++++|+.+ ..+..||..+..+... .+....... +++.
T Consensus 273 ~v~~yd~~~~~W~~l~~mp~~r~~-~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~-~~~~ 349 (557)
T PHA02713 273 CILVYNINTMEYSVISTIPNHIIN-YASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRF-SLAV 349 (557)
T ss_pred CEEEEeCCCCeEEECCCCCccccc-eEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhce-eEEE
Confidence 46778877654322 22111111 12222 256677777754 3477888877653211 111111111 2222
Q ss_pred ecCCCeEEEEEcCCC-----cEEEEeCCCCeeeEeec--CCeE-EEEEeCCCCEEEEEECC-------------------
Q 044075 603 HPKKNDLFCSCDGNS-----EIRFWNLSQYSCARISK--GGTV-QVRFQPRLGLLLAAASE------------------- 655 (786)
Q Consensus 603 sp~g~~ll~sgs~Dg-----~I~iwDl~~~~~~~~~~--~~i~-~i~~sp~g~~Ll~gs~d------------------- 655 (786)
. ++.+++.|+.++ .+..||..+.+-..... .... .....-++..+++|+.+
T Consensus 350 ~--~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~ 427 (557)
T PHA02713 350 I--DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEED 427 (557)
T ss_pred E--CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEECCEEEEEeCCCccccccccccccccccccc
Confidence 2 356776777653 47889988654333211 1111 11122355666666654
Q ss_pred ----CeEEEEEcCCCcEE--EEEecCCCCEEEEEEcCCCCEEEEEeCC-------eEEEEECCC-C--eeEEEEccCCCc
Q 044075 656 ----NVVSIFDVETDRLT--HSFKGHSTEIHSVCWDTNGEYLASVSQD-------SVRVWSLAS-G--ECIHELSSSGNK 719 (786)
Q Consensus 656 ----g~I~iwD~~t~~~i--~~l~~h~~~I~sv~~spdg~~Lasgs~D-------~I~vwDl~s-~--~~i~~l~~~~~~ 719 (786)
..+..||.++.+-. ..+...... .+++ .-++++.+.|+.+ .+..||..+ . +.+..+......
T Consensus 428 ~~~~~~ve~YDP~td~W~~v~~m~~~r~~-~~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~ 505 (557)
T PHA02713 428 THSSNKVIRYDTVNNIWETLPNFWTGTIR-PGVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSA 505 (557)
T ss_pred ccccceEEEECCCCCeEeecCCCCccccc-CcEE-EECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccccc
Confidence 24777888776432 222111111 1222 2356666666532 367899886 3 334444333222
Q ss_pred eEEEEEeCCCCEEEEEECCC--eEEEEECCCCeEEEE
Q 044075 720 FHSCIFHPSYPTLMVIGGYQ--SLELWNMAENKCMTI 754 (786)
Q Consensus 720 I~sv~fspdg~~L~sgs~dg--~I~IwDl~~~~~~~~ 754 (786)
...+++ ++...++||.++ .+..||..+++...+
T Consensus 506 ~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~ 540 (557)
T PHA02713 506 LHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWNHI 540 (557)
T ss_pred ceeEEE--CCEEEEEeeecceeehhhcCcccccccch
Confidence 222333 667778888787 788999988876543
No 387
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.74 E-value=0.035 Score=50.18 Aligned_cols=101 Identities=17% Similarity=0.185 Sum_probs=66.0
Q ss_pred eEEEEEcC---CC-CEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 512 VTCCHFSS---DG-KLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 512 V~~lafSp---dg-~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
|+++++.. || +.|++|+.|..|+||+-+ +.+..+..+ +.|++++-... ..|+.+-.+|+|-+|+-....+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~-~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~RlW-- 75 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITET-DKVTSLCSLGG-GRFAYALANGTVGVYDRSQRLW-- 75 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecc-cceEEEEEcCC-CEEEEEecCCEEEEEeCcceee--
Confidence 66666655 33 479999999999999854 555566444 46777777655 5799999999999998644322
Q ss_pred eeecCCCCCeEEEEEec---CCCeEEEEEcCCCcEE
Q 044075 588 QTYTGHNNHVMSLDFHP---KKNDLFCSCDGNSEIR 620 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp---~g~~ll~sgs~Dg~I~ 620 (786)
..+. ...+.++.+.. +|..-+++|-.+|.|-
T Consensus 76 -RiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 76 -RIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred -eecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 2222 23366665543 3444455777777764
No 388
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=96.68 E-value=0.081 Score=62.39 Aligned_cols=214 Identities=13% Similarity=0.086 Sum_probs=115.8
Q ss_pred CCEEEEEeCC------CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC------CcEEEEeCCCCeee
Q 044075 563 STQLATSSFD------KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN------SEIRFWNLSQYSCA 630 (786)
Q Consensus 563 g~~Lasgs~D------g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D------g~I~iwDl~~~~~~ 630 (786)
+.++++|+.+ ..|..||..++.+....-..+.....++++. ++.++++|+.| ..+..||....+-.
T Consensus 285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~--~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~ 362 (571)
T KOG4441|consen 285 GKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL--NGKLYVVGGYDSGSDRLSSVERYDPRTNQWT 362 (571)
T ss_pred CeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE--CCEEEEEccccCCCcccceEEEecCCCCcee
Confidence 4455666665 3577888887754322222233344556665 35788888888 35777888776643
Q ss_pred Eeec--CCeEEE-EEeCCCCEEEEEECCC-----eEEEEEcCCCcEEEEEecCCCCEEEEEE-cCCCCEEEEEeCC----
Q 044075 631 RISK--GGTVQV-RFQPRLGLLLAAASEN-----VVSIFDVETDRLTHSFKGHSTEIHSVCW-DTNGEYLASVSQD---- 697 (786)
Q Consensus 631 ~~~~--~~i~~i-~~sp~g~~Ll~gs~dg-----~I~iwD~~t~~~i~~l~~h~~~I~sv~~-spdg~~Lasgs~D---- 697 (786)
..-. ..-..+ ...-+|...++|+.|| .|..||.++.+-...-. ......+... .-+|.+.++|+.+
T Consensus 363 ~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~-m~~~r~~~gv~~~~g~iYi~GG~~~~~~ 441 (571)
T KOG4441|consen 363 PVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAP-MLTRRSGHGVAVLGGKLYIIGGGDGSSN 441 (571)
T ss_pred ccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCC-CCcceeeeEEEEECCEEEEEcCcCCCcc
Confidence 3222 111111 1233566778888875 47788887653221111 1112222221 2367777777643
Q ss_pred ---eEEEEECCCCee--EEEEccCCCceEEEEEeCCCCEEEEEECCC-----eEEEEECCCCeEEEEcccCCCeEEEEEc
Q 044075 698 ---SVRVWSLASGEC--IHELSSSGNKFHSCIFHPSYPTLMVIGGYQ-----SLELWNMAENKCMTIAAHDCVISALAQS 767 (786)
Q Consensus 698 ---~I~vwDl~s~~~--i~~l~~~~~~I~sv~fspdg~~L~sgs~dg-----~I~IwDl~~~~~~~~~~h~~~V~slafs 767 (786)
++..||..+.+- +..+........ ++ .-++...++||.|+ +|..||..+.+...+..-......+...
T Consensus 442 ~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a-~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~ 519 (571)
T KOG4441|consen 442 CLNSVECYDPETNTWTLIAPMNTRRSGFG-VA-VLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVV 519 (571)
T ss_pred ccceEEEEcCCCCceeecCCcccccccce-EE-EECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEE
Confidence 478888887642 222222222222 22 22455666777665 4888999998877554322222222211
Q ss_pred -CCCCEEEEEeCCCc
Q 044075 768 -PVTGMVASASHDKS 781 (786)
Q Consensus 768 -pdg~~LaSgs~DG~ 781 (786)
-++.+.++|+.||.
T Consensus 520 ~~~~~ly~vGG~~~~ 534 (571)
T KOG4441|consen 520 VLGGKLYAVGGFDGN 534 (571)
T ss_pred EECCEEEEEecccCc
Confidence 23667788888864
No 389
>PHA02713 hypothetical protein; Provisional
Probab=96.60 E-value=0.17 Score=59.78 Aligned_cols=204 Identities=5% Similarity=0.021 Sum_probs=100.1
Q ss_pred cEEEEcCCCCcceee-eecCCCCCeEEEEEecCCCeEEEEEcCC------CcEEEEeCCCCeeeEeec--CC-eEEEEEe
Q 044075 574 TVRIWDAAKPNFCLQ-TYTGHNNHVMSLDFHPKKNDLFCSCDGN------SEIRFWNLSQYSCARISK--GG-TVQVRFQ 643 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~-~~~~h~~~V~sl~~sp~g~~ll~sgs~D------g~I~iwDl~~~~~~~~~~--~~-i~~i~~s 643 (786)
.+..||..+..+... .+..... -.+++.. ++.+++.|+.+ ..+..||..+..-..... .. .......
T Consensus 273 ~v~~yd~~~~~W~~l~~mp~~r~-~~~~a~l--~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~ 349 (557)
T PHA02713 273 CILVYNINTMEYSVISTIPNHII-NYASAIV--DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAV 349 (557)
T ss_pred CEEEEeCCCCeEEECCCCCcccc-ceEEEEE--CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEE
Confidence 467788777653211 1111111 1223333 45677677643 347788887765332221 11 1112233
Q ss_pred CCCCEEEEEECCC-----eEEEEEcCCCcEEE--EEecCCCCEEEEEEcCCCCEEEEEeCC-------------------
Q 044075 644 PRLGLLLAAASEN-----VVSIFDVETDRLTH--SFKGHSTEIHSVCWDTNGEYLASVSQD------------------- 697 (786)
Q Consensus 644 p~g~~Ll~gs~dg-----~I~iwD~~t~~~i~--~l~~h~~~I~sv~~spdg~~Lasgs~D------------------- 697 (786)
-++..+++|+.++ .+..||..+.+-.. .+.........+. -++++.+.|+.+
T Consensus 350 ~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~ 427 (557)
T PHA02713 350 IDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEED 427 (557)
T ss_pred ECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEE--ECCEEEEEeCCCccccccccccccccccccc
Confidence 4566667777653 48889988763222 1111111111222 356766666532
Q ss_pred -----eEEEEECCCCee--EEEEccCCCceEEEEEeCCCCEEEEEECC------CeEEEEECCC-CeEEEEc---ccCCC
Q 044075 698 -----SVRVWSLASGEC--IHELSSSGNKFHSCIFHPSYPTLMVIGGY------QSLELWNMAE-NKCMTIA---AHDCV 760 (786)
Q Consensus 698 -----~I~vwDl~s~~~--i~~l~~~~~~I~sv~fspdg~~L~sgs~d------g~I~IwDl~~-~~~~~~~---~h~~~ 760 (786)
.+..||..+.+= +..+... .....+..-++...++||.+ ..+..||..+ ++...+. .....
T Consensus 428 ~~~~~~ve~YDP~td~W~~v~~m~~~--r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~ 505 (557)
T PHA02713 428 THSSNKVIRYDTVNNIWETLPNFWTG--TIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSA 505 (557)
T ss_pred ccccceEEEECCCCCeEeecCCCCcc--cccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccccc
Confidence 467788776532 2222111 11111222345555666543 2478899997 5554322 22222
Q ss_pred eEEEEEcCCCCEEEEEeCCC--cEEEeC
Q 044075 761 ISALAQSPVTGMVASASHDK--SVKIWK 786 (786)
Q Consensus 761 V~slafspdg~~LaSgs~DG--~I~IWd 786 (786)
...+.+ ++++.++||.|| .|..||
T Consensus 506 ~~~~~~--~~~iyv~Gg~~~~~~~e~yd 531 (557)
T PHA02713 506 LHTILH--DNTIMMLHCYESYMLQDTFN 531 (557)
T ss_pred ceeEEE--CCEEEEEeeecceeehhhcC
Confidence 223333 578888999888 454443
No 390
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=96.59 E-value=0.15 Score=60.16 Aligned_cols=227 Identities=14% Similarity=0.148 Sum_probs=121.4
Q ss_pred CCCEEEEEECC------CeEEEEEcCCCeeeeecCC-CCCCeEEEEEccCCCEEEEEeCC------CcEEEEcCCCCcce
Q 044075 520 DGKLLASAGHD------KKVVVWNMENFQTECTPDD-HNHIITDVRFRPNSTQLATSSFD------KTVRIWDAAKPNFC 586 (786)
Q Consensus 520 dg~~Lasgs~D------g~V~IWdl~t~~~~~~l~~-h~~~V~sl~fspdg~~Lasgs~D------g~I~VWdl~s~~~~ 586 (786)
.+.+++.||.+ ..|..||..+..-.....- +...-.+++.. ++.+.++|+.| .++..||...+.+.
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~ 362 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWT 362 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCcee
Confidence 45566777766 3578888876533322211 22223344444 45788889988 35778888877643
Q ss_pred eeeecCCCCCeEEEEEecCCCeEEEEEcCCCc-----EEEEeCCCCeeeEeec--CCeEEE-EEeCCCCEEEEEECC---
Q 044075 587 LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSE-----IRFWNLSQYSCARISK--GGTVQV-RFQPRLGLLLAAASE--- 655 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~-----I~iwDl~~~~~~~~~~--~~i~~i-~~sp~g~~Ll~gs~d--- 655 (786)
. ...-...-..+....-++.+++.|+.||. |-.||..+.+....-. ...... ...-++...++|+.+
T Consensus 363 ~--~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~ 440 (571)
T KOG4441|consen 363 P--VAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSS 440 (571)
T ss_pred c--cCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCc
Confidence 2 11111111122222224678888888864 6778877655433222 122222 233456667777754
Q ss_pred ---CeEEEEEcCCCcEEE--EEecCCCCEEEEEEcCCCCEEEEEeCC------eEEEEECCCCeeEE--EEccCCCceEE
Q 044075 656 ---NVVSIFDVETDRLTH--SFKGHSTEIHSVCWDTNGEYLASVSQD------SVRVWSLASGECIH--ELSSSGNKFHS 722 (786)
Q Consensus 656 ---g~I~iwD~~t~~~i~--~l~~h~~~I~sv~~spdg~~Lasgs~D------~I~vwDl~s~~~i~--~l~~~~~~I~s 722 (786)
..+..||..+.+-.. .+..-.... .++. -++.+.+.|+.+ +|..||..+.+-.. .+......+..
T Consensus 441 ~~l~sve~YDP~t~~W~~~~~M~~~R~~~-g~a~-~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~ 518 (571)
T KOG4441|consen 441 NCLNSVECYDPETNTWTLIAPMNTRRSGF-GVAV-LNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGV 518 (571)
T ss_pred cccceEEEEcCCCCceeecCCcccccccc-eEEE-ECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccE
Confidence 357788888764322 222111111 2332 356666666644 37889888764322 22222222222
Q ss_pred EEEeCCCCEEEEEECCC-----eEEEEECCCCeEEE
Q 044075 723 CIFHPSYPTLMVIGGYQ-----SLELWNMAENKCMT 753 (786)
Q Consensus 723 v~fspdg~~L~sgs~dg-----~I~IwDl~~~~~~~ 753 (786)
+.+ ++...++|+.|+ +|..||..+++...
T Consensus 519 ~~~--~~~ly~vGG~~~~~~l~~ve~ydp~~d~W~~ 552 (571)
T KOG4441|consen 519 VVL--GGKLYAVGGFDGNNNLNTVECYDPETDTWTE 552 (571)
T ss_pred EEE--CCEEEEEecccCccccceeEEcCCCCCceee
Confidence 222 455667777765 68889888777653
No 391
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.55 E-value=0.099 Score=47.34 Aligned_cols=101 Identities=19% Similarity=0.162 Sum_probs=67.2
Q ss_pred eEEEEEcc---CC-CEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee
Q 044075 554 ITDVRFRP---NS-TQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC 629 (786)
Q Consensus 554 V~sl~fsp---dg-~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~ 629 (786)
|+++++.. +| +.|++|+.|..||||+-+. ++..+.. .+.|.+++-... ..|+.+-.+|+|-+|+-....-
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e---~~~Ei~e-~~~v~~L~~~~~--~~F~Y~l~NGTVGvY~~~~RlW 75 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE---IVAEITE-TDKVTSLCSLGG--GRFAYALANGTVGVYDRSQRLW 75 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc---EEEEEec-ccceEEEEEcCC--CEEEEEecCCEEEEEeCcceee
Confidence 66777665 22 5899999999999998543 4444443 466888877755 3466788899999998654333
Q ss_pred eEeecCCeEEEEEeCCC----CEEEEEECCCeEEE
Q 044075 630 ARISKGGTVQVRFQPRL----GLLLAAASENVVSI 660 (786)
Q Consensus 630 ~~~~~~~i~~i~~sp~g----~~Ll~gs~dg~I~i 660 (786)
....+..++++.+..-. ..|++|-.+|.|-+
T Consensus 76 RiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 76 RIKSKNQVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred eeccCCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 33344556666543322 26888888887753
No 392
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=96.54 E-value=1.3 Score=46.61 Aligned_cols=266 Identities=11% Similarity=0.069 Sum_probs=141.8
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCC--CCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDD--HNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC 586 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~--h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~ 586 (786)
.+-+..+.++ ++++..+..+.-++|.|+.+......+.. ..+.-.++..+ |++..++..|.-+.+.|+.+...+
T Consensus 86 ~~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vs--Gn~aYVadlddgfLivdvsdpssP 161 (370)
T COG5276 86 RDLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVS--GNYAYVADLDDGFLIVDVSDPSSP 161 (370)
T ss_pred hhhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEec--CCEEEEeeccCcEEEEECCCCCCc
Confidence 4456777787 45777777788899999987554433321 22344455554 889998887777888999876643
Q ss_pred ee--eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe---ec--CCeEEEEEeCCCCEEEEEECCCeEE
Q 044075 587 LQ--TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI---SK--GGTVQVRFQPRLGLLLAAASENVVS 659 (786)
Q Consensus 587 ~~--~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~---~~--~~i~~i~~sp~g~~Ll~gs~dg~I~ 659 (786)
.. .+......-..++.+ |++-+ .+..|+-+.+.|+........ .. ..+..+..+++..+++ -.+--+.
T Consensus 162 ~lagrya~~~~d~~~v~IS--Gn~AY-vA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~v--vy~egvl 236 (370)
T COG5276 162 QLAGRYALPGGDTHDVAIS--GNYAY-VAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLV--VYDEGVL 236 (370)
T ss_pred eeeeeeccCCCCceeEEEe--cCeEE-EEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEE--EcccceE
Confidence 32 233333334566666 55555 455688899999986543222 11 3556666666544433 3444567
Q ss_pred EEEcCCCcEEEEEec-CCCCEEEE-EEcCCCCEEEEEeCC-eEEEEECCCCe---eEEEEccCCCceEEEEEeCCCCEEE
Q 044075 660 IFDVETDRLTHSFKG-HSTEIHSV-CWDTNGEYLASVSQD-SVRVWSLASGE---CIHELSSSGNKFHSCIFHPSYPTLM 733 (786)
Q Consensus 660 iwD~~t~~~i~~l~~-h~~~I~sv-~~spdg~~Lasgs~D-~I~vwDl~s~~---~i~~l~~~~~~I~sv~fspdg~~L~ 733 (786)
+.|..+.+....+.. ....+.++ .+.-.+++......+ .+-+.|+.+.. ....+...+..-..+..+ +.++.
T Consensus 237 ivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisnp~spfl~ss~~t~g~~a~gi~ay--~~y~y 314 (370)
T COG5276 237 IVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISNPPSPFLSSSLDTAGYQAAGIRAY--GNYNY 314 (370)
T ss_pred EEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccCCCCCchhccccCCCccccceEEe--cCeeE
Confidence 777776653333321 12222222 233345555555555 55555655421 111222222222222222 22333
Q ss_pred EEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 734 VIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 734 sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.+..+ ...+-+....+.. ...+....+.+.+.+-+.+++.+...++.+.||+
T Consensus 315 iadkn-~g~vV~~s~~s~m~~~~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~~ 367 (370)
T COG5276 315 IADKN-TGAVVDASPPSMMDKRPGRPTIGQSCDVSVDTQIIYSTDYNGGLSIIE 367 (370)
T ss_pred eccCC-ceEEEeCCChhhcccccCcceEeeecceEEEeeEEEEeecCCCEEEEE
Confidence 33332 3333343332222 1112222344444455566888899999999885
No 393
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=96.44 E-value=1.5 Score=46.06 Aligned_cols=194 Identities=12% Similarity=0.140 Sum_probs=117.2
Q ss_pred ceeeeeEEeecCCCC-eEEEEEcCCCCEEEEEECCC--eEEEEEcCCCeeeeecCCCC-CCeEEEEEccCCCEEEEEeCC
Q 044075 497 FSFNEVSSIRKSSSK-VTCCHFSSDGKLLASAGHDK--KVVVWNMENFQTECTPDDHN-HIITDVRFRPNSTQLATSSFD 572 (786)
Q Consensus 497 ~~~~~v~~l~~H~~~-V~~lafSpdg~~Lasgs~Dg--~V~IWdl~t~~~~~~l~~h~-~~V~sl~fspdg~~Lasgs~D 572 (786)
+.++.+.++...... .-.+.|..+|.++-+.+.-| .|+.+|+.+++......-.. ----.++.. ++++....-.+
T Consensus 31 ~~~~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~ 109 (264)
T PF05096_consen 31 YSYEVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKE 109 (264)
T ss_dssp EEEEEEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSS
T ss_pred eeeEEEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecC
Confidence 345556565533333 34678878888888887766 69999999998765543222 122334444 33444455668
Q ss_pred CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--------CCeEEEEEeC
Q 044075 573 KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--------GGTVQVRFQP 644 (786)
Q Consensus 573 g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--------~~i~~i~~sp 644 (786)
+...+||..+.+. +..+. ..+.=+.++ .++..++ .++....|+++|..+.+..+... ..+..+.+-
T Consensus 110 ~~~f~yd~~tl~~-~~~~~-y~~EGWGLt--~dg~~Li-~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i- 183 (264)
T PF05096_consen 110 GTGFVYDPNTLKK-IGTFP-YPGEGWGLT--SDGKRLI-MSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI- 183 (264)
T ss_dssp SEEEEEETTTTEE-EEEEE--SSS--EEE--ECSSCEE-EE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-
T ss_pred CeEEEEccccceE-EEEEe-cCCcceEEE--cCCCEEE-EECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-
Confidence 9999999988663 44443 234567777 3566676 45557789999998876655433 233445554
Q ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEEec------------C---CCCEEEEEEcCCCCEEEEEeCC
Q 044075 645 RLGLLLAAASENVVSIFDVETDRLTHSFKG------------H---STEIHSVCWDTNGEYLASVSQD 697 (786)
Q Consensus 645 ~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~------------h---~~~I~sv~~spdg~~Lasgs~D 697 (786)
+|..++=.-....|...|..+|+++..+.- + ..-.+.|+|+|....|.+.+..
T Consensus 184 ~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~ 251 (264)
T PF05096_consen 184 NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKL 251 (264)
T ss_dssp TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT
T ss_pred cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCC
Confidence 343333334467899999999998887631 1 2457899999988777776655
No 394
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.28 E-value=0.65 Score=47.35 Aligned_cols=145 Identities=15% Similarity=0.235 Sum_probs=86.0
Q ss_pred CCeEEEEEccCCCEEEEEeC-C---------CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEE
Q 044075 552 HIITDVRFRPNSTQLATSSF-D---------KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRF 621 (786)
Q Consensus 552 ~~V~sl~fspdg~~Lasgs~-D---------g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~i 621 (786)
...++-..+|+|++++ |.. | |.++.|-.... +..+...-.--..++|+.+.+.+.+.-+.+-+|.-
T Consensus 109 nR~NDgkvdP~Gryy~-GtMad~~~~le~~~g~Ly~~~~~h~---v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a 184 (310)
T KOG4499|consen 109 NRLNDGKVDPDGRYYG-GTMADFGDDLEPIGGELYSWLAGHQ---VELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDA 184 (310)
T ss_pred cccccCccCCCCceee-eeeccccccccccccEEEEeccCCC---ceeeehhccCCccccccccCcEEEEEccCceEEee
Confidence 4456667789998843 322 2 33444433221 11111122223456676666666656666666666
Q ss_pred EeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEE
Q 044075 622 WNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVR 700 (786)
Q Consensus 622 wDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~ 700 (786)
||.+-. +|...+.=.|||++...+..... .-.++++.+|.+++++-.. +|.
T Consensus 185 ~dyd~~-----------------------tG~~snr~~i~dlrk~~~~e~~~-----PDGm~ID~eG~L~Va~~ng~~V~ 236 (310)
T KOG4499|consen 185 YDYDCP-----------------------TGDLSNRKVIFDLRKSQPFESLE-----PDGMTIDTEGNLYVATFNGGTVQ 236 (310)
T ss_pred eecCCC-----------------------cccccCcceeEEeccCCCcCCCC-----CCcceEccCCcEEEEEecCcEEE
Confidence 663211 11112333466666543322222 2234556788888888777 999
Q ss_pred EEECCCCeeEEEEccCCCceEEEEEeCC
Q 044075 701 VWSLASGECIHELSSSGNKFHSCIFHPS 728 (786)
Q Consensus 701 vwDl~s~~~i~~l~~~~~~I~sv~fspd 728 (786)
.+|..+|+.+.++......|++|+|--.
T Consensus 237 ~~dp~tGK~L~eiklPt~qitsccFgGk 264 (310)
T KOG4499|consen 237 KVDPTTGKILLEIKLPTPQITSCCFGGK 264 (310)
T ss_pred EECCCCCcEEEEEEcCCCceEEEEecCC
Confidence 9999999999999999999999999643
No 395
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.27 E-value=0.077 Score=63.91 Aligned_cols=100 Identities=19% Similarity=0.301 Sum_probs=71.7
Q ss_pred CCEEEEEECCCeEEEEEcCCC-eeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEE
Q 044075 521 GKLLASAGHDKKVVVWNMENF-QTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMS 599 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~-~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~s 599 (786)
+..++.|++.|.|-..|.... .....-..-.++|++++|+.+|..++.|-.+|.|.+||+.+++ ..+.+..|..+++.
T Consensus 99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k-~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAK-ILKVITEHGAPVTG 177 (1206)
T ss_pred eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCc-ceeeeeecCCccce
Confidence 557888888999998887652 2222333456799999999999999999999999999999876 56767666666555
Q ss_pred EEE---ecCCCeEEEEEcCCCcEEEEeC
Q 044075 600 LDF---HPKKNDLFCSCDGNSEIRFWNL 624 (786)
Q Consensus 600 l~~---sp~g~~ll~sgs~Dg~I~iwDl 624 (786)
+-+ ..++. .+.+++..|. +|.+
T Consensus 178 vi~v~~t~~nS-~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 178 VIFVGRTSQNS-KLLTSDTGGS--FWKL 202 (1206)
T ss_pred EEEEEEeCCCc-EEEEccCCCc--eEEE
Confidence 544 33333 4557776665 5543
No 396
>PRK13684 Ycf48-like protein; Provisional
Probab=96.24 E-value=2.5 Score=46.50 Aligned_cols=265 Identities=8% Similarity=-0.009 Sum_probs=128.8
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC---eeeee-cCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF---QTECT-PDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN 584 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~---~~~~~-l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~ 584 (786)
...+++|+|..+.+-+|+|. +|.|..= .+.+ +.... +......+.++.|.++ ..+++ +..+.| |...++.
T Consensus 45 ~~~l~~v~F~d~~~g~avG~-~G~il~T-~DgG~tW~~~~~~~~~~~~~l~~v~~~~~-~~~~~-G~~g~i--~~S~DgG 118 (334)
T PRK13684 45 EANLLDIAFTDPNHGWLVGS-NRTLLET-NDGGETWEERSLDLPEENFRLISISFKGD-EGWIV-GQPSLL--LHTTDGG 118 (334)
T ss_pred CCceEEEEEeCCCcEEEEEC-CCEEEEE-cCCCCCceECccCCcccccceeeeEEcCC-cEEEe-CCCceE--EEECCCC
Confidence 55799999986666666664 5543321 1222 22111 1112335778888743 33443 444543 3223221
Q ss_pred ceeeeec---CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE----eecCCeEEEEEeCCCCEEEEEECCCe
Q 044075 585 FCLQTYT---GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR----ISKGGTVQVRFQPRLGLLLAAASENV 657 (786)
Q Consensus 585 ~~~~~~~---~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~----~~~~~i~~i~~sp~g~~Ll~gs~dg~ 657 (786)
..-.... ........+..... ..+++. +..|.|..=+ +.++.-. ...+.+..+.+.+++.++ +.+..|.
T Consensus 119 ~tW~~~~~~~~~~~~~~~i~~~~~-~~~~~~-g~~G~i~~S~-DgG~tW~~~~~~~~g~~~~i~~~~~g~~v-~~g~~G~ 194 (334)
T PRK13684 119 KNWTRIPLSEKLPGSPYLITALGP-GTAEMA-TNVGAIYRTT-DGGKNWEALVEDAAGVVRNLRRSPDGKYV-AVSSRGN 194 (334)
T ss_pred CCCeEccCCcCCCCCceEEEEECC-Ccceee-eccceEEEEC-CCCCCceeCcCCCcceEEEEEECCCCeEE-EEeCCce
Confidence 1111110 01111222222212 223323 3344333221 1122111 113456778888886555 4445565
Q ss_pred EEEE-EcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEcc----CCCceEEEEEeCCCCEE
Q 044075 658 VSIF-DVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSS----SGNKFHSCIFHPSYPTL 732 (786)
Q Consensus 658 I~iw-D~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~----~~~~I~sv~fspdg~~L 732 (786)
+..- |-....-......-...++++.+.+++..++++..+.+++=....+..-..... ....+..+.+.+++. +
T Consensus 195 i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~-~ 273 (334)
T PRK13684 195 FYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGE-I 273 (334)
T ss_pred EEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCC-E
Confidence 5432 222111112222345678999999999988877665554323344432222111 123577888998776 5
Q ss_pred EEEECCCeEEEEECCCCeEEEEc----ccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 733 MVIGGYQSLELWNMAENKCMTIA----AHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 733 ~sgs~dg~I~IwDl~~~~~~~~~----~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
++++.+|.|. .....++..... .-....+.+.|..++..++ .+..|.|..|+
T Consensus 274 ~~~G~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~il~~~ 329 (334)
T PRK13684 274 WAGGGNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRGVLLRYV 329 (334)
T ss_pred EEEcCCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEE-ECCCceEEEec
Confidence 5566677555 344444433221 2234578888887766655 55678887664
No 397
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=96.24 E-value=0.021 Score=65.08 Aligned_cols=92 Identities=13% Similarity=0.168 Sum_probs=78.2
Q ss_pred CCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceE-EEEEeCCCCEEEEEECCCeEEEEECCCCeEEE
Q 044075 676 STEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFH-SCIFHPSYPTLMVIGGYQSLELWNMAENKCMT 753 (786)
Q Consensus 676 ~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~-sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~ 753 (786)
...|..+.|+|.-.+||.+..+ .|.+..+. ...+.++..++..++ +++|.|||+.|++|-.||+|++.|+.++..+.
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 4567889999999999999998 78888887 777888887777777 99999999999999999999999999988764
Q ss_pred E--cccCCCeEEEEEcC
Q 044075 754 I--AAHDCVISALAQSP 768 (786)
Q Consensus 754 ~--~~h~~~V~slafsp 768 (786)
- ..-...|+++.|++
T Consensus 99 ~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 99 SFLFSVETDISKGIWDR 115 (665)
T ss_pred ccccccccchheeeccc
Confidence 4 45566788888863
No 398
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=96.19 E-value=2.3 Score=46.73 Aligned_cols=66 Identities=14% Similarity=0.088 Sum_probs=40.4
Q ss_pred CceEEEEEeCC-------CCEEEEEECCCeEEEEECCCCeEE----EE-cccCCCeEEEEEcCCCCEEEEEeCCCcEE
Q 044075 718 NKFHSCIFHPS-------YPTLMVIGGYQSLELWNMAENKCM----TI-AAHDCVISALAQSPVTGMVASASHDKSVK 783 (786)
Q Consensus 718 ~~I~sv~fspd-------g~~L~sgs~dg~I~IwDl~~~~~~----~~-~~h~~~V~slafspdg~~LaSgs~DG~I~ 783 (786)
..+..+.|... +.++++.-..+.|....+..+..+ .+ ......+.+|++.|||.++++.+.+|.|.
T Consensus 253 ~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 253 SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp --EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 44556666533 334444444567888887654322 22 23455899999999999998888888874
No 399
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=96.18 E-value=0.0071 Score=61.04 Aligned_cols=137 Identities=11% Similarity=0.089 Sum_probs=81.3
Q ss_pred EEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee----EeecCCeE-EE
Q 044075 566 LATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA----RISKGGTV-QV 640 (786)
Q Consensus 566 Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~----~~~~~~i~-~i 640 (786)
+..-+.||.|+-++++.-+...+....|.....- +....-++.|..+|.|++|........ ......+. .|
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~~~v----~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~I 108 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKESCRSERFIDEGQRV----VTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGI 108 (238)
T ss_pred hccccCCcccccchhhhhhhhhhhhhhhhcceee----cccCceEEeecccceEEEecCCccchHHHhhhcccccceecc
Confidence 4445668888888876544333332323322111 222223447788999999988732111 11111121 22
Q ss_pred EEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCC-CCEEEEEEcCCCCEEEEE--eCC-eEEEEECCC
Q 044075 641 RFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHS-TEIHSVCWDTNGEYLASV--SQD-SVRVWSLAS 706 (786)
Q Consensus 641 ~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~-~~I~sv~~spdg~~Lasg--s~D-~I~vwDl~s 706 (786)
....++.+..+++.++.|+.|++.-.+.+.....|. .++.....+..++++++. |.| .++.|++..
T Consensus 109 p~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 109 PNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 233445578889999999999999888777776676 555555555566666666 556 677777654
No 400
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=96.14 E-value=1.3 Score=49.52 Aligned_cols=216 Identities=11% Similarity=0.148 Sum_probs=102.5
Q ss_pred CCCEEEEEE-CCCeEEEEEcCC----CeeeeecCC---CC----CCeEEEEEccCCCEEEEEe--C----CCcEEEEcCC
Q 044075 520 DGKLLASAG-HDKKVVVWNMEN----FQTECTPDD---HN----HIITDVRFRPNSTQLATSS--F----DKTVRIWDAA 581 (786)
Q Consensus 520 dg~~Lasgs-~Dg~V~IWdl~t----~~~~~~l~~---h~----~~V~sl~fspdg~~Lasgs--~----Dg~I~VWdl~ 581 (786)
+.++|+..+ ..+.|+|.|+.+ .+..++++. +. ..-..+..-|+|.+++++- . -|-+.++|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 466777776 678899999883 344444432 11 1223344557888888752 2 2457778777
Q ss_pred CCcceeeeecC---CCCCeEEEEEecCCCeEEEEEcC--------------------CCcEEEEeCCCCeeeEeecCC--
Q 044075 582 KPNFCLQTYTG---HNNHVMSLDFHPKKNDLFCSCDG--------------------NSEIRFWNLSQYSCARISKGG-- 636 (786)
Q Consensus 582 s~~~~~~~~~~---h~~~V~sl~~sp~g~~ll~sgs~--------------------Dg~I~iwDl~~~~~~~~~~~~-- 636 (786)
+.+. ...... ....-..+-|.|..+.++ |... ..+|.+||+.+.+.+..+.-+
T Consensus 166 tf~v-~g~We~~~~~~~~gYDfw~qpr~nvMi-SSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~ 243 (461)
T PF05694_consen 166 TFEV-KGRWEKDRGPQPFGYDFWYQPRHNVMI-SSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEE 243 (461)
T ss_dssp T--E-EEE--SB-TT------EEEETTTTEEE-E-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TT
T ss_pred cccc-cceeccCCCCCCCCCCeEEcCCCCEEE-EeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCC
Confidence 6542 333222 123346677888766555 5432 368999999999988876622
Q ss_pred ---eEEEEE--eCCCCEEEEEEC-CCeEEEEEc-CCCc----EEEEEecC-----------------CCCEEEEEEcCCC
Q 044075 637 ---TVQVRF--QPRLGLLLAAAS-ENVVSIFDV-ETDR----LTHSFKGH-----------------STEIHSVCWDTNG 688 (786)
Q Consensus 637 ---i~~i~~--sp~g~~Ll~gs~-dg~I~iwD~-~t~~----~i~~l~~h-----------------~~~I~sv~~spdg 688 (786)
...+.| .|+..+=++++. ...|..|-- +.++ .+..+... ..-|+.|.+|.|.
T Consensus 244 g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDD 323 (461)
T PF05694_consen 244 GQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDD 323 (461)
T ss_dssp EEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS
T ss_pred CCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCC
Confidence 345666 455555455444 455555443 4332 22222110 2447899999999
Q ss_pred CEEEEEeCC--eEEEEECCCC---eeEEEEccC----------------CCceEEEEEeCCCCEEEEEEC
Q 044075 689 EYLASVSQD--SVRVWSLASG---ECIHELSSS----------------GNKFHSCIFHPSYPTLMVIGG 737 (786)
Q Consensus 689 ~~Lasgs~D--~I~vwDl~s~---~~i~~l~~~----------------~~~I~sv~fspdg~~L~sgs~ 737 (786)
++|.+++.- .|+.||+... +.+..+... .+...-+..|-||+.|++.++
T Consensus 324 rfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTnS 393 (461)
T PF05694_consen 324 RFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTNS 393 (461)
T ss_dssp -EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE--
T ss_pred CEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEee
Confidence 999888765 8999999864 333332211 112356778889988887753
No 401
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.14 E-value=1.7 Score=45.79 Aligned_cols=155 Identities=10% Similarity=0.035 Sum_probs=94.2
Q ss_pred CeEEEEEecCCCeEEEEE--cCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEE-cCCCcEE-EE
Q 044075 596 HVMSLDFHPKKNDLFCSC--DGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFD-VETDRLT-HS 671 (786)
Q Consensus 596 ~V~sl~~sp~g~~ll~sg--s~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD-~~t~~~i-~~ 671 (786)
.+.+.++++++..+.+.. .....|+++.................-.|++++...++...+....++. ...+... ..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~ 104 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVE 104 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEE
Confidence 688999999999887776 3445566665544333322334667778999977766666666666663 3333221 12
Q ss_pred Eec--CCCCEEEEEEcCCCCEEEEEe----CCeEEEEECC---CC------eeEEEEccCCCceEEEEEeCCCCEEEEEE
Q 044075 672 FKG--HSTEIHSVCWDTNGEYLASVS----QDSVRVWSLA---SG------ECIHELSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 672 l~~--h~~~I~sv~~spdg~~Lasgs----~D~I~vwDl~---s~------~~i~~l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
+.. ....|..+.++|||..++... ...|.|--+. .+ ..+.........+..+.|.+++.+++.+.
T Consensus 105 v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~ 184 (253)
T PF10647_consen 105 VDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGR 184 (253)
T ss_pred ecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeC
Confidence 221 122899999999999888776 3356655432 22 11222223356889999999998777666
Q ss_pred CCCe-EEE-EECCCCe
Q 044075 737 GYQS-LEL-WNMAENK 750 (786)
Q Consensus 737 ~dg~-I~I-wDl~~~~ 750 (786)
..+. +.. .....+.
T Consensus 185 ~~~~~~~~~v~~dG~~ 200 (253)
T PF10647_consen 185 SAGGPVVRLVSVDGGP 200 (253)
T ss_pred CCCCceeEEEEccCCc
Confidence 5442 333 4444433
No 402
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.03 E-value=0.069 Score=59.82 Aligned_cols=149 Identities=15% Similarity=0.166 Sum_probs=94.1
Q ss_pred CCCEE-EEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCC-------EEEEEeCCCcEEEEcCCCCcceeeeec
Q 044075 520 DGKLL-ASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNST-------QLATSSFDKTVRIWDAAKPNFCLQTYT 591 (786)
Q Consensus 520 dg~~L-asgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~-------~Lasgs~Dg~I~VWdl~s~~~~~~~~~ 591 (786)
+.++| .++..-..|+=-|++.++.+....-|.. |+-+.+.|+.+ .-+.|-.|..|.-||.+-...-
T Consensus 344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~----- 417 (644)
T KOG2395|consen 344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKN----- 417 (644)
T ss_pred ccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcc-----
Confidence 44444 3455556788889999999999988776 77778887643 2234555677777777632210
Q ss_pred CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEE
Q 044075 592 GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHS 671 (786)
Q Consensus 592 ~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~ 671 (786)
-++|... +.+ +. +....|++ .....++++|+.+|.|++||--.......
T Consensus 418 -------kl~~~q~-kqy--~~--------------------k~nFsc~a-TT~sG~IvvgS~~GdIRLYdri~~~AKTA 466 (644)
T KOG2395|consen 418 -------KLAVVQS-KQY--ST--------------------KNNFSCFA-TTESGYIVVGSLKGDIRLYDRIGRRAKTA 466 (644)
T ss_pred -------eeeeeec-ccc--cc--------------------ccccceee-ecCCceEEEeecCCcEEeehhhhhhhhhc
Confidence 1111100 000 00 00011111 12336788999999999999743344445
Q ss_pred EecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECC
Q 044075 672 FKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLA 705 (786)
Q Consensus 672 l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~ 705 (786)
+.+...+|..|..+.+|++|++.+...+.+.|+.
T Consensus 467 lPgLG~~I~hVdvtadGKwil~Tc~tyLlLi~t~ 500 (644)
T KOG2395|consen 467 LPGLGDAIKHVDVTADGKWILATCKTYLLLIDTL 500 (644)
T ss_pred ccccCCceeeEEeeccCcEEEEecccEEEEEEEe
Confidence 6778899999999999999998888777666654
No 403
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.02 E-value=0.8 Score=50.75 Aligned_cols=121 Identities=16% Similarity=0.167 Sum_probs=85.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeee----eecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCC
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTE----CTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKP 583 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~----~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~ 583 (786)
..++|.++.||+|.+.||+--.|++|.+++....+.. .+.+..+..|...+|+.+ .-+|.....| +-+|-+...
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pe 142 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPE 142 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchh
Confidence 5679999999999999999999999999997432222 222344556999999865 4566555444 778877666
Q ss_pred cceeeeecCCCCCeEEEEEecCCCeEEEEEc-CCCcEEEEeCCCCeee
Q 044075 584 NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCD-GNSEIRFWNLSQYSCA 630 (786)
Q Consensus 584 ~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs-~Dg~I~iwDl~~~~~~ 630 (786)
+..++..+.|.-.|.-..|.++...++.+.+ ..+.+.=+-++.+...
T Consensus 143 krslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~~v~ 190 (657)
T KOG2377|consen 143 KRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAGTMS 190 (657)
T ss_pred hhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeeceee
Confidence 6667778888899999999998776655544 3444444555544433
No 404
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.93 E-value=0.83 Score=48.24 Aligned_cols=191 Identities=12% Similarity=0.153 Sum_probs=119.5
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCC-CCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCC
Q 044075 505 IRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDH-NHIITDVRFRPNSTQLATSSFDKTVRIWDAAKP 583 (786)
Q Consensus 505 l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h-~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~ 583 (786)
+.+-...|.++.|+|+.+.|++......-.||=..+|+.+.++.-. -..-..|.+..++.++++--.++.+.++.++..
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~ 160 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD 160 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence 3445556999999999999999888888888877888888877421 122456778878877777777888988877655
Q ss_pred cceee---------eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe-eeE------------eecCCeEEEE
Q 044075 584 NFCLQ---------TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS-CAR------------ISKGGTVQVR 641 (786)
Q Consensus 584 ~~~~~---------~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~-~~~------------~~~~~i~~i~ 641 (786)
...+. ...........++|.|....+++ +-+..-+.||.+.... .+. .+-..+..+.
T Consensus 161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~-aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~ 239 (316)
T COG3204 161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFV-AKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLE 239 (316)
T ss_pred ccEEeccceEEeccccCCCCcCceeeecCCCCceEEE-EEccCCcEEEEEecCCcccccccccCcccccceEeeccccce
Confidence 32111 11122556789999999888874 4445566666554322 111 1123455677
Q ss_pred EeCCCCEEEEEEC-CCeEEEEEcCCCcEEEEEec----C--C---CCEEEEEEcCCCCEEEEEeCC
Q 044075 642 FQPRLGLLLAAAS-ENVVSIFDVETDRLTHSFKG----H--S---TEIHSVCWDTNGEYLASVSQD 697 (786)
Q Consensus 642 ~sp~g~~Ll~gs~-dg~I~iwD~~t~~~i~~l~~----h--~---~~I~sv~~spdg~~Lasgs~D 697 (786)
|++..+.+++-+. ++.+.-.|.... ++..+.- | . ...-.|+.+++|.+.+++-.+
T Consensus 240 ~~~~~~~LLVLS~ESr~l~Evd~~G~-~~~~lsL~~g~~gL~~dipqaEGiamDd~g~lYIvSEPn 304 (316)
T COG3204 240 FNAITNSLLVLSDESRRLLEVDLSGE-VIELLSLTKGNHGLSSDIPQAEGIAMDDDGNLYIVSEPN 304 (316)
T ss_pred ecCCCCcEEEEecCCceEEEEecCCC-eeeeEEeccCCCCCcccCCCcceeEECCCCCEEEEecCC
Confidence 8876666655555 566666776543 3333321 1 1 123467777777655544333
No 405
>PHA03098 kelch-like protein; Provisional
Probab=95.85 E-value=0.32 Score=57.11 Aligned_cols=155 Identities=12% Similarity=0.132 Sum_probs=76.9
Q ss_pred CCeEEEEEcCC-----CcEEEEeCCCCeeeEeec--CCe-EEEEEeCCCCEEEEEECC------CeEEEEEcCCCcEEEE
Q 044075 606 KNDLFCSCDGN-----SEIRFWNLSQYSCARISK--GGT-VQVRFQPRLGLLLAAASE------NVVSIFDVETDRLTHS 671 (786)
Q Consensus 606 g~~ll~sgs~D-----g~I~iwDl~~~~~~~~~~--~~i-~~i~~sp~g~~Ll~gs~d------g~I~iwD~~t~~~i~~ 671 (786)
++.+++.|+.+ ..+..||..+.+-..... .+. .......++..++.|+.+ ..+..||..+.+-...
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~ 421 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKG 421 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeec
Confidence 35566677654 347778877654332211 111 111122345566666632 4588899887643221
Q ss_pred --EecCCCCEEEEEEcCCCCEEEEEeCC---------eEEEEECCCCeeE--EEEccCCCceEEEEEeCCCCEEEEEECC
Q 044075 672 --FKGHSTEIHSVCWDTNGEYLASVSQD---------SVRVWSLASGECI--HELSSSGNKFHSCIFHPSYPTLMVIGGY 738 (786)
Q Consensus 672 --l~~h~~~I~sv~~spdg~~Lasgs~D---------~I~vwDl~s~~~i--~~l~~~~~~I~sv~fspdg~~L~sgs~d 738 (786)
+...... .+++ ..++.+++.|+.+ .+.+||..+.+-. ..+.........+.+ ++..++.||.+
T Consensus 422 ~~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~ 497 (534)
T PHA03098 422 SPLPISHYG-GCAI-YHDGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF--NNKIYVVGGDK 497 (534)
T ss_pred CCCCccccC-ceEE-EECCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE--CCEEEEEcCCc
Confidence 1111111 1222 2355666666532 3888998875422 111111111122222 55666666543
Q ss_pred -----CeEEEEECCCCeEEEEcccCCCeEEE
Q 044075 739 -----QSLELWNMAENKCMTIAAHDCVISAL 764 (786)
Q Consensus 739 -----g~I~IwDl~~~~~~~~~~h~~~V~sl 764 (786)
..|.+||..++....+......+.++
T Consensus 498 ~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~ 528 (534)
T PHA03098 498 YEYYINEIEVYDDKTNTWTLFCKFPKVIGSL 528 (534)
T ss_pred CCcccceeEEEeCCCCEEEecCCCcccccce
Confidence 47899999988776555444444333
No 406
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=95.83 E-value=1.7 Score=48.71 Aligned_cols=182 Identities=12% Similarity=0.098 Sum_probs=93.8
Q ss_pred CCCeEEEEEcCCCcEEEEeCCC----CeeeEeecC----------CeEEEEEeCCCCEEEEEEC------CCeEEEEEcC
Q 044075 605 KKNDLFCSCDGNSEIRFWNLSQ----YSCARISKG----------GTVQVRFQPRLGLLLAAAS------ENVVSIFDVE 664 (786)
Q Consensus 605 ~g~~ll~sgs~Dg~I~iwDl~~----~~~~~~~~~----------~i~~i~~sp~g~~Ll~gs~------dg~I~iwD~~ 664 (786)
+.++|++-|-..+.|+|+|+.+ .+..+++.. ....+..-|+|+.++++-. -|.+.++|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 4566776776889999999873 334444331 1233455678877777643 2568999999
Q ss_pred CCcEEEEEecCC---CCEEEEEEcCCCCEEEEEe--------------------CC-eEEEEECCCCeeEEEEccCCC--
Q 044075 665 TDRLTHSFKGHS---TEIHSVCWDTNGEYLASVS--------------------QD-SVRVWSLASGECIHELSSSGN-- 718 (786)
Q Consensus 665 t~~~i~~l~~h~---~~I~sv~~spdg~~Lasgs--------------------~D-~I~vwDl~s~~~i~~l~~~~~-- 718 (786)
+.+......... ..-..+-|.|..+.+++.. .+ ++.+||+.+.+.+.++.....
T Consensus 166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~ 245 (461)
T PF05694_consen 166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ 245 (461)
T ss_dssp T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence 888877776422 2345677888888888874 24 799999999999999876543
Q ss_pred ceEEEEEe--CCCCEEEEEE-CCCeEEEE-ECCCCeE-----EEEccc-----------------CCCeEEEEEcCCCCE
Q 044075 719 KFHSCIFH--PSYPTLMVIG-GYQSLELW-NMAENKC-----MTIAAH-----------------DCVISALAQSPVTGM 772 (786)
Q Consensus 719 ~I~sv~fs--pdg~~L~sgs-~dg~I~Iw-Dl~~~~~-----~~~~~h-----------------~~~V~slafspdg~~ 772 (786)
....+.|. |+..+=++++ -..+|..| ...+++. +.+... ..-|++|..|.|.++
T Consensus 246 ~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrf 325 (461)
T PF05694_consen 246 MPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRF 325 (461)
T ss_dssp EEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-E
T ss_pred ceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCE
Confidence 24455554 4455444433 34455554 3344432 222211 356899999999998
Q ss_pred EEEEe-CCCcEEEeC
Q 044075 773 VASAS-HDKSVKIWK 786 (786)
Q Consensus 773 LaSgs-~DG~I~IWd 786 (786)
|+.++ -+|.|+.||
T Consensus 326 LYvs~W~~GdvrqYD 340 (461)
T PF05694_consen 326 LYVSNWLHGDVRQYD 340 (461)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEcccCCcEEEEe
Confidence 87766 578999886
No 407
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.82 E-value=0.48 Score=49.63 Aligned_cols=141 Identities=15% Similarity=0.143 Sum_probs=96.5
Q ss_pred eEEEEEecCCCeEEEEEcCCCc-EEEEeCCCCeeeEeec---CCe--EEEEEeCCCCEEEEEECC-----CeEEEEEcCC
Q 044075 597 VMSLDFHPKKNDLFCSCDGNSE-IRFWNLSQYSCARISK---GGT--VQVRFQPRLGLLLAAASE-----NVVSIFDVET 665 (786)
Q Consensus 597 V~sl~~sp~g~~ll~sgs~Dg~-I~iwDl~~~~~~~~~~---~~i--~~i~~sp~g~~Ll~gs~d-----g~I~iwD~~t 665 (786)
...|+|+|....-++.+-.-|+ ..++|........... +.. -.-+|+++|.+|++.-.| |.|-|||.+.
T Consensus 70 ~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~ 149 (366)
T COG3490 70 GHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDARE 149 (366)
T ss_pred cCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccc
Confidence 4567888877766666665554 5678888765443332 111 124699999999887664 7899999986
Q ss_pred C-cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-------------------eEEEEECCCCeeEEEEc----cCCCceE
Q 044075 666 D-RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-------------------SVRVWSLASGECIHELS----SSGNKFH 721 (786)
Q Consensus 666 ~-~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-------------------~I~vwDl~s~~~i~~l~----~~~~~I~ 721 (786)
+ ..+.++..|.-....+.|.+||+.++.+..+ ++.+.|..++..+.+.. .+...|.
T Consensus 150 ~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiR 229 (366)
T COG3490 150 GFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIR 229 (366)
T ss_pred ccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhccee
Confidence 5 6677888888888999999999999887542 24455656666554332 2234577
Q ss_pred EEEEeCCCCEEEEEEC
Q 044075 722 SCIFHPSYPTLMVIGG 737 (786)
Q Consensus 722 sv~fspdg~~L~sgs~ 737 (786)
.+...+++..++.+-.
T Consensus 230 Hld~g~dgtvwfgcQy 245 (366)
T COG3490 230 HLDIGRDGTVWFGCQY 245 (366)
T ss_pred eeeeCCCCcEEEEEEe
Confidence 8888888876665543
No 408
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.78 E-value=1.8 Score=45.81 Aligned_cols=164 Identities=11% Similarity=0.164 Sum_probs=99.4
Q ss_pred cCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeec-CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC
Q 044075 547 PDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYT-GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS 625 (786)
Q Consensus 547 l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~-~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~ 625 (786)
+.+-...|.++.|+|+.+.|++......-.||=..++. .++.+. ..-.....|.|..++. ++++--.+..+.++.+.
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~Gd-lirtiPL~g~~DpE~Ieyig~n~-fvi~dER~~~l~~~~vd 158 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGD-LIRTIPLTGFSDPETIEYIGGNQ-FVIVDERDRALYLFTVD 158 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEEEecCCc-eEEEecccccCChhHeEEecCCE-EEEEehhcceEEEEEEc
Confidence 34555569999999999988888877776666555555 344332 1123345677775443 44466677888888776
Q ss_pred CCeeeEee-------------cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcE---EEEEecC-------CCCEEEE
Q 044075 626 QYSCARIS-------------KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRL---THSFKGH-------STEIHSV 682 (786)
Q Consensus 626 ~~~~~~~~-------------~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~---i~~l~~h-------~~~I~sv 682 (786)
....+... +.+...++|.+....|+++-+.+-+.||.+..... ++....+ -..|.++
T Consensus 159 ~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl 238 (316)
T COG3204 159 ADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGL 238 (316)
T ss_pred CCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccc
Confidence 54221111 23456789999999999999988888887764321 1111111 2346677
Q ss_pred EEcCCCC-EEEEEeCC-eEEEEECCCCeeEEEE
Q 044075 683 CWDTNGE-YLASVSQD-SVRVWSLASGECIHEL 713 (786)
Q Consensus 683 ~~spdg~-~Lasgs~D-~I~vwDl~s~~~i~~l 713 (786)
.|++... +|+-+.++ .+...|.. |+.+..+
T Consensus 239 ~~~~~~~~LLVLS~ESr~l~Evd~~-G~~~~~l 270 (316)
T COG3204 239 EFNAITNSLLVLSDESRRLLEVDLS-GEVIELL 270 (316)
T ss_pred eecCCCCcEEEEecCCceEEEEecC-CCeeeeE
Confidence 8887544 44444455 56666654 3334333
No 409
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=95.70 E-value=6 Score=48.12 Aligned_cols=241 Identities=12% Similarity=0.083 Sum_probs=119.5
Q ss_pred eEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecC--CCe-
Q 044075 532 KVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPK--KND- 608 (786)
Q Consensus 532 ~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~--g~~- 608 (786)
.|++++-. .....+.. ...++....+.+...++.++.++.+...++.........-......|.|++++|. +..
T Consensus 471 ~iRl~ss~--~~~~~W~~-p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~ 547 (1096)
T KOG1897|consen 471 SIRLVSSA--GLRSEWRP-PGKITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNK 547 (1096)
T ss_pred cEEEEcch--hhhhcccC-CCceEEEEEeecceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCc
Confidence 46666643 12222322 2334444445556677777777777777776655222222334578999999975 344
Q ss_pred --EEEEEcCCCcEEEEeCC-CCeeeEe-------ecCCeEEEEEeCCCCEEEEEECCCeEEEE--EcCCCcEEEEE--ec
Q 044075 609 --LFCSCDGNSEIRFWNLS-QYSCARI-------SKGGTVQVRFQPRLGLLLAAASENVVSIF--DVETDRLTHSF--KG 674 (786)
Q Consensus 609 --ll~sgs~Dg~I~iwDl~-~~~~~~~-------~~~~i~~i~~sp~g~~Ll~gs~dg~I~iw--D~~t~~~i~~l--~~ 674 (786)
+++.|.++..+.+.-.. ....... ....+.-.++-.+..+|+++..||.+.-| |..++.....- .-
T Consensus 548 s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~l 627 (1096)
T KOG1897|consen 548 SRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTL 627 (1096)
T ss_pred ceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcccceEcccccccc
Confidence 77788776665544322 2222211 11334445666678899999999988765 44444322211 11
Q ss_pred CCCCEEEEEEcCC-CCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeC-CCCEEEEEECCCeEEEEECCCCeEE
Q 044075 675 HSTEIHSVCWDTN-GEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHP-SYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 675 h~~~I~sv~~spd-g~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fsp-dg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
-..++.--.|+.. ...++++++.-..+|..+..-+...+... .--.-|.|+. .++-.++....+.+.+.-++.-..+
T Consensus 628 Gt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~kLv~spls~k-ev~~~c~f~s~a~~d~l~~~~~~~l~i~tid~iqkl 706 (1096)
T KOG1897|consen 628 GTQPISLRTFSSKSRTAVFALSDRPTVIYSSNGKLVYSPLSLK-EVNHMCPFNSDAYPDSLASANGGALTIGTIDEIQKL 706 (1096)
T ss_pred CCCCcEEEEEeeCCceEEEEeCCCCEEEEecCCcEEEeccchH-HhhhhcccccccCCceEEEecCCceEEEEecchhhc
Confidence 2344544455554 45666666654444543322222222111 1111223332 2233333344445666655542222
Q ss_pred --EEcccCCCeEEEEEcCCCCEEEEE
Q 044075 753 --TIAAHDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 753 --~~~~h~~~V~slafspdg~~LaSg 776 (786)
+...-......+++.+....+++.
T Consensus 707 ~irtvpl~~~prrI~~q~~sl~~~v~ 732 (1096)
T KOG1897|consen 707 HIRTVPLGESPRRICYQESSLTFGVL 732 (1096)
T ss_pred ceeeecCCCChhheEecccceEEEEE
Confidence 112233445556666533344333
No 410
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=95.49 E-value=4 Score=42.85 Aligned_cols=237 Identities=11% Similarity=0.037 Sum_probs=149.8
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
+.-..++-.|||..-+++...+.|--.|-.+++....--+....-..|..-||+..-++-+.. -|.-.|-++.+.....
T Consensus 62 ~ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~f~ 140 (353)
T COG4257 62 SAPFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTRFP 140 (353)
T ss_pred CCccccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEEee
Confidence 345678888999988888888888888888988887776766677788888988766654333 4555566554422211
Q ss_pred e--cCCCCCeEEEEEecCCCeEEEEEcCC---------CcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeE
Q 044075 590 Y--TGHNNHVMSLDFHPKKNDLFCSCDGN---------SEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVV 658 (786)
Q Consensus 590 ~--~~h~~~V~sl~~sp~g~~ll~sgs~D---------g~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I 658 (786)
+ ..-........|.+.|+..| ++... +.|++|+...+ .....||..|+|...++.-.++.|
T Consensus 141 lp~~~a~~nlet~vfD~~G~lWF-t~q~G~yGrLdPa~~~i~vfpaPqG-------~gpyGi~atpdGsvwyaslagnai 212 (353)
T COG4257 141 LPLEHADANLETAVFDPWGNLWF-TGQIGAYGRLDPARNVISVFPAPQG-------GGPYGICATPDGSVWYASLAGNAI 212 (353)
T ss_pred cccccCCCcccceeeCCCccEEE-eeccccceecCcccCceeeeccCCC-------CCCcceEECCCCcEEEEeccccce
Confidence 1 12235677888998877555 65421 23444443321 456778999999999888888888
Q ss_pred EEEEcCCCcEEEEE--ecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCee-EEEEccCCCceEEEEEeCCCCEEEE
Q 044075 659 SIFDVETDRLTHSF--KGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGEC-IHELSSSGNKFHSCIFHPSYPTLMV 734 (786)
Q Consensus 659 ~iwD~~t~~~i~~l--~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~-i~~l~~~~~~I~sv~fspdg~~L~s 734 (786)
...|..++.....- .........|--+|.|+..++.... .+.-||.....- ...+.+....-.++.+...++..++
T Consensus 213 aridp~~~~aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW~eypLPgs~arpys~rVD~~grVW~s 292 (353)
T COG4257 213 ARIDPFAGHAEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSWIEYPLPGSKARPYSMRVDRHGRVWLS 292 (353)
T ss_pred EEcccccCCcceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccceeeeCCCCCCCcceeeeccCCcEEee
Confidence 88888776221111 1112334455566777777775555 677777654331 1233333444556666666665555
Q ss_pred EECCCeEEEEECCCCeEEEEc
Q 044075 735 IGGYQSLELWNMAENKCMTIA 755 (786)
Q Consensus 735 gs~dg~I~IwDl~~~~~~~~~ 755 (786)
--..+.|.-||.++.....+.
T Consensus 293 ea~agai~rfdpeta~ftv~p 313 (353)
T COG4257 293 EADAGAIGRFDPETARFTVLP 313 (353)
T ss_pred ccccCceeecCcccceEEEec
Confidence 555667777887776655444
No 411
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=95.46 E-value=3.2 Score=46.33 Aligned_cols=141 Identities=9% Similarity=0.033 Sum_probs=77.6
Q ss_pred CeEEEEEccCCCEEEEEe-----------CCC-cEEEEcCCCC--cc-eeeeecCCCCCeEEEEEecCCCeEEEEEcCCC
Q 044075 553 IITDVRFRPNSTQLATSS-----------FDK-TVRIWDAAKP--NF-CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS 617 (786)
Q Consensus 553 ~V~sl~fspdg~~Lasgs-----------~Dg-~I~VWdl~s~--~~-~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg 617 (786)
....|+|.++|+++++-. ..+ .|.+++-.++ .. ....+...-.....+++.+++ ++++ +...
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~-~~~~ 91 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVA-TPPD 91 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEe-CCCe
Confidence 456788999888766642 123 6766654322 11 123333333456889998877 5544 3333
Q ss_pred cEEEEeCCCC-----e--ee-Eeec-------CCeEEEEEeCCCCEEEEEECC-------------------CeEEEEEc
Q 044075 618 EIRFWNLSQY-----S--CA-RISK-------GGTVQVRFQPRLGLLLAAASE-------------------NVVSIFDV 663 (786)
Q Consensus 618 ~I~iwDl~~~-----~--~~-~~~~-------~~i~~i~~sp~g~~Ll~gs~d-------------------g~I~iwD~ 663 (786)
.+++.|.... + .+ ..+. .....++|.|+|...++.+.. +.|..+|.
T Consensus 92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~p 171 (367)
T TIGR02604 92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNP 171 (367)
T ss_pred EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEec
Confidence 3334354321 1 11 1121 124568899998776655521 45666666
Q ss_pred CCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC
Q 044075 664 ETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD 697 (786)
Q Consensus 664 ~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D 697 (786)
.+++....-.+ -.....++|+++|+++++-..+
T Consensus 172 dg~~~e~~a~G-~rnp~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 172 DGGKLRVVAHG-FQNPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred CCCeEEEEecC-cCCCccceECCCCCEEEEccCC
Confidence 65543322222 3345789999999988775543
No 412
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=95.45 E-value=2.8 Score=51.19 Aligned_cols=225 Identities=11% Similarity=0.058 Sum_probs=115.6
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCCC--------CeEEEEEcc----------------CCCEEEEEeCCCcEE
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHNH--------IITDVRFRP----------------NSTQLATSSFDKTVR 576 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~--------~V~sl~fsp----------------dg~~Lasgs~Dg~I~ 576 (786)
+..|++++.++.|.-.|..+++.+-.+..... .+..+.+.. .+..|+.++.|+.|.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 45677777788888888888887776643221 112233321 234788888999999
Q ss_pred EEcCCCCcceeeeecCCCCCeE-------------EEEEec--CCCeEEEEEc---------CCCcEEEEeCCCCeeeEe
Q 044075 577 IWDAAKPNFCLQTYTGHNNHVM-------------SLDFHP--KKNDLFCSCD---------GNSEIRFWNLSQYSCARI 632 (786)
Q Consensus 577 VWdl~s~~~~~~~~~~h~~~V~-------------sl~~sp--~g~~ll~sgs---------~Dg~I~iwDl~~~~~~~~ 632 (786)
-.|.++++.+- .+. ..+.|. .+.-.| .++.+++.++ .+|.|+-+|.++++.+-.
T Consensus 274 ALDA~TGk~~W-~fg-~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~ 351 (764)
T TIGR03074 274 ALDADTGKLCE-DFG-NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA 351 (764)
T ss_pred EEECCCCCEEE-Eec-CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence 99999988542 221 111110 011111 1233443221 258899999999887765
Q ss_pred ecCCeEEE-EEeCCCCEEEEEECCC-eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEE-eCCeEEEEECCCCee
Q 044075 633 SKGGTVQV-RFQPRLGLLLAAASEN-VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASV-SQDSVRVWSLASGEC 709 (786)
Q Consensus 633 ~~~~i~~i-~~sp~g~~Ll~gs~dg-~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasg-s~D~I~vwDl~s~~~ 709 (786)
+....... ..-+.+.....++... ....+|.+.+....-. +... ..+....+..... ..+.|.-.|.++|+.
T Consensus 352 ~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~pt-Gn~~----pd~~g~~r~~~~n~y~~slvALD~~TGk~ 426 (764)
T TIGR03074 352 WDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPM-GNQT----PDQWGGDRTPADEKYSSSLVALDATTGKE 426 (764)
T ss_pred EecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeC-CCcc----ccccCCccccCcccccceEEEEeCCCCce
Confidence 54210000 0011222222122111 3444555544332211 1111 0110000000000 122578888899988
Q ss_pred EEEEccCCCceEE---------EEEeC-CCC---EEEEEECCCeEEEEECCCCeEE
Q 044075 710 IHELSSSGNKFHS---------CIFHP-SYP---TLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 710 i~~l~~~~~~I~s---------v~fsp-dg~---~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
...+......+.. +.+.. +++ .++.++.+|.++++|.++++.+
T Consensus 427 ~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l 482 (764)
T TIGR03074 427 RWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPI 482 (764)
T ss_pred EEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEE
Confidence 8777552222211 12222 453 7888999999999999999876
No 413
>PHA03098 kelch-like protein; Provisional
Probab=95.45 E-value=0.6 Score=54.78 Aligned_cols=182 Identities=10% Similarity=0.058 Sum_probs=88.7
Q ss_pred CCCEEEEEECCC------eEEEEEcCCCeeeeec--CCCCCCeEEEEEccCCCEEEEEeCC-----CcEEEEcCCCCcce
Q 044075 520 DGKLLASAGHDK------KVVVWNMENFQTECTP--DDHNHIITDVRFRPNSTQLATSSFD-----KTVRIWDAAKPNFC 586 (786)
Q Consensus 520 dg~~Lasgs~Dg------~V~IWdl~t~~~~~~l--~~h~~~V~sl~fspdg~~Lasgs~D-----g~I~VWdl~s~~~~ 586 (786)
++.+++.||.++ .+..||..+.+-...- .........+.+ ++.+++.|+.+ ..+..||..+..+.
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 371 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGESKWR 371 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCCcee
Confidence 456667776542 5778887765443221 111112222222 57777888765 35778888776542
Q ss_pred eeeecCCCCCeEEEEEecCCCeEEEEEcCC------CcEEEEeCCCCeeeEeecCC---eEEEEEeCCCCEEEEEECC--
Q 044075 587 LQTYTGHNNHVMSLDFHPKKNDLFCSCDGN------SEIRFWNLSQYSCARISKGG---TVQVRFQPRLGLLLAAASE-- 655 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D------g~I~iwDl~~~~~~~~~~~~---i~~i~~sp~g~~Ll~gs~d-- 655 (786)
...-..+...-.+++.. ++.+++.|+.+ ..+..||+.+.+-......+ ....+...++..++.|+.+
T Consensus 372 ~~~~lp~~r~~~~~~~~--~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 449 (534)
T PHA03098 372 EEPPLIFPRYNPCVVNV--NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGISYI 449 (534)
T ss_pred eCCCcCcCCccceEEEE--CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCccCC
Confidence 21111111111122222 35566666632 45788998775543322111 1111222344555666542
Q ss_pred ------CeEEEEEcCCCcEEEE--EecCCCCEEEEEEcCCCCEEEEEeCC------eEEEEECCCC
Q 044075 656 ------NVVSIFDVETDRLTHS--FKGHSTEIHSVCWDTNGEYLASVSQD------SVRVWSLASG 707 (786)
Q Consensus 656 ------g~I~iwD~~t~~~i~~--l~~h~~~I~sv~~spdg~~Lasgs~D------~I~vwDl~s~ 707 (786)
..+.+||..+.+-... +.........+. -++++++.|+.+ .|.+||..+.
T Consensus 450 ~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 513 (534)
T PHA03098 450 DNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDKTN 513 (534)
T ss_pred CCCcccceEEEecCCCCceeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCCCC
Confidence 2388899887643221 111111111222 256666666543 5777877664
No 414
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=95.44 E-value=4 Score=50.19 Aligned_cols=174 Identities=15% Similarity=0.222 Sum_probs=95.0
Q ss_pred CCCCCeEEEEEc---c----CCCEEEEEeCCCcEEEEcCCCCc--------------ceeeeecC---CCCCeEEEEEec
Q 044075 549 DHNHIITDVRFR---P----NSTQLATSSFDKTVRIWDAAKPN--------------FCLQTYTG---HNNHVMSLDFHP 604 (786)
Q Consensus 549 ~h~~~V~sl~fs---p----dg~~Lasgs~Dg~I~VWdl~s~~--------------~~~~~~~~---h~~~V~sl~~sp 604 (786)
....+|..|+|. . ..++|++ -....+.|+...-.+ .++..+.. ...+..+++|+|
T Consensus 77 ~~~~PI~qI~fa~~~~~~~~~~~~l~V-rt~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP 155 (765)
T PF10214_consen 77 DDGSPIKQIKFATLSESFDEKSRWLAV-RTETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNP 155 (765)
T ss_pred CCCCCeeEEEecccccccCCcCcEEEE-EcCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEecc
Confidence 456688888887 2 1234444 444566666621111 01111111 123566777777
Q ss_pred CCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEE
Q 044075 605 KKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCW 684 (786)
Q Consensus 605 ~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~ 684 (786)
....-||..+..|...||++...... .... .-+.....|.| ++|... ...-..|+|
T Consensus 156 ~~~~q~AiVD~~G~Wsvw~i~~~~~~---~~~~----------~~~~~~~~gsi-~~d~~e----------~s~w~rI~W 211 (765)
T PF10214_consen 156 WDQRQFAIVDEKGNWSVWDIKGRPKR---KSSN----------LRLSRNISGSI-IFDPEE----------LSNWKRILW 211 (765)
T ss_pred CccceEEEEeccCcEEEEEecccccc---CCcc----------eeeccCCCccc-cCCCcc----------cCcceeeEe
Confidence 76667777777777777777211110 0001 11111112333 222211 144567899
Q ss_pred cCCCCEEEEEeCCeEEEEECCCCeeEE--EEccCCCceEEEEEeCCCC-EEEEEECCCeEEEEECCC
Q 044075 685 DTNGEYLASVSQDSVRVWSLASGECIH--ELSSSGNKFHSCIFHPSYP-TLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 685 spdg~~Lasgs~D~I~vwDl~s~~~i~--~l~~~~~~I~sv~fspdg~-~L~sgs~dg~I~IwDl~~ 748 (786)
.++...|++++...+.++|+++..... ........|..+.-++... +++.- ....|...++..
T Consensus 212 ~~~~~~lLv~~r~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiL-Ts~eiiw~~~~~ 277 (765)
T PF10214_consen 212 VSDSNRLLVCNRSKLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFIL-TSKEIIWLDVKS 277 (765)
T ss_pred cCCCCEEEEEcCCceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEE-ecCeEEEEEccC
Confidence 999899999998899999999876533 1223456788888887732 22222 234666667666
No 415
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=95.43 E-value=0.019 Score=67.50 Aligned_cols=174 Identities=13% Similarity=0.161 Sum_probs=103.2
Q ss_pred EeecCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcC--CCeee-----eecCCCCCCeEEEEEcc---CCCEEEEEeCC
Q 044075 504 SIRKSSSKVTCCHFSS-DGKLLASAGHDKKVVVWNME--NFQTE-----CTPDDHNHIITDVRFRP---NSTQLATSSFD 572 (786)
Q Consensus 504 ~l~~H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~--t~~~~-----~~l~~h~~~V~sl~fsp---dg~~Lasgs~D 572 (786)
-+++..+.|-.+.|-. +...++ -.-|.+.||+++ .|+.. +........+.-|.|+| +.-++..+-.+
T Consensus 127 l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~ 204 (1283)
T KOG1916|consen 127 LAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKG 204 (1283)
T ss_pred HHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCC
Confidence 3456778888888854 222222 234678899876 33332 22233344556667766 56677777888
Q ss_pred CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEE
Q 044075 573 KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAA 652 (786)
Q Consensus 573 g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~g 652 (786)
++|++.++++.. ...+.+|...+..++|...|-..+.+ ++|||..|+++
T Consensus 205 ~~i~lL~~~ra~--~~l~rsHs~~~~d~a~~~~g~~~l~~-----------------------------lSpDGtv~a~a 253 (1283)
T KOG1916|consen 205 GEIRLLNINRAL--RSLFRSHSQRVTDMAFFAEGVLKLAS-----------------------------LSPDGTVFAWA 253 (1283)
T ss_pred CceeEeeechHH--HHHHHhcCCCcccHHHHhhchhhhee-----------------------------eCCCCcEEEEe
Confidence 999998887654 35667799999998887665544444 34555555555
Q ss_pred ECCCeEEEE-----EcCCCcEEEEEecCCC-CEEEEEEcCC-------C--CEEEEEeCC--eEEEEECCCCeeE
Q 044075 653 ASENVVSIF-----DVETDRLTHSFKGHST-EIHSVCWDTN-------G--EYLASVSQD--SVRVWSLASGECI 710 (786)
Q Consensus 653 s~dg~I~iw-----D~~t~~~i~~l~~h~~-~I~sv~~spd-------g--~~Lasgs~D--~I~vwDl~s~~~i 710 (786)
+.||.+..| +.....+.+..+.|.. +-.|.-++.+ + .+++++++- .+++|.....+|+
T Consensus 254 ~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 254 ISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred ecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 666554443 4444455566666652 2222222221 1 234444433 6999988877776
No 416
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=95.36 E-value=0.51 Score=54.01 Aligned_cols=169 Identities=13% Similarity=0.152 Sum_probs=102.8
Q ss_pred CCeEEEEEecCCCeEEEEEc--CCCcEEEEeCCCCeeeEeecCCeEEEEEeCCC----CEEEEEECCCeEEEEEcCC---
Q 044075 595 NHVMSLDFHPKKNDLFCSCD--GNSEIRFWNLSQYSCARISKGGTVQVRFQPRL----GLLLAAASENVVSIFDVET--- 665 (786)
Q Consensus 595 ~~V~sl~~sp~g~~ll~sgs--~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g----~~Ll~gs~dg~I~iwD~~t--- 665 (786)
.+|..++|. ||+.++.+.- .+|.+++=|-. .+ -.-.++..+.|.|-+ ..+++.-....|.||-+.-
T Consensus 20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfGds~---vi-GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~ 94 (671)
T PF15390_consen 20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFGDSK---VI-GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTT 94 (671)
T ss_pred ccccceEec-CCCEEEEEeeeeeCCccccCCcc---Ee-eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCcc
Confidence 478889997 6777765542 23444433221 11 111567788888753 3677888889999998762
Q ss_pred --CcEEEEEec-CCC--C--EEEEEEcCCCCEEEEEeCC-eEEEEECCCC-eeEEEEccCCCceEEEEEeCCCCEEEEEE
Q 044075 666 --DRLTHSFKG-HST--E--IHSVCWDTNGEYLASVSQD-SVRVWSLASG-ECIHELSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 666 --~~~i~~l~~-h~~--~--I~sv~~spdg~~Lasgs~D-~I~vwDl~s~-~~i~~l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
.+.+..-.. ... + -..+.|+|....|++-... .-.+++++.. ..++.-....+.|.|.+|..||..|+++-
T Consensus 95 e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAv 174 (671)
T PF15390_consen 95 ERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAV 174 (671)
T ss_pred ccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEe
Confidence 222222111 111 1 2367899999998887665 4445666543 23333224568899999999999888776
Q ss_pred CCC-eEEEEECCCCeEE-----EEcccCCCeEEEEEcC
Q 044075 737 GYQ-SLELWNMAENKCM-----TIAAHDCVISALAQSP 768 (786)
Q Consensus 737 ~dg-~I~IwDl~~~~~~-----~~~~h~~~V~slafsp 768 (786)
+.. .-+|||-..+... .+..-.+.|.++.-.-
T Consensus 175 GSsLHSyiWd~~qKtL~~CsfcPVFdv~~~Icsi~AT~ 212 (671)
T PF15390_consen 175 GSSLHSYIWDSAQKTLHRCSFCPVFDVGGYICSIEATV 212 (671)
T ss_pred CCeEEEEEecCchhhhhhCCcceeecCCCceEEEEEec
Confidence 654 6789986654321 3344455666665443
No 417
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=95.35 E-value=5.2 Score=43.30 Aligned_cols=219 Identities=13% Similarity=0.120 Sum_probs=102.8
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce--eeeecCC---CCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC
Q 044075 551 NHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC--LQTYTGH---NNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS 625 (786)
Q Consensus 551 ~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~--~~~~~~h---~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~ 625 (786)
...+.+|.|..+..-+++|. .+.| +...++... ....... .....+|.|.. ...+++|. .+ +.+...+
T Consensus 16 ~~~l~dV~F~d~~~G~~VG~-~g~i--l~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~--~~g~ivG~-~g-~ll~T~D 88 (302)
T PF14870_consen 16 DKPLLDVAFVDPNHGWAVGA-YGTI--LKTTDGGKTWQPVSLDLDNPFDYHLNSISFDG--NEGWIVGE-PG-LLLHTTD 88 (302)
T ss_dssp SS-EEEEEESSSS-EEEEET-TTEE--EEESSTTSS-EE-----S-----EEEEEEEET--TEEEEEEE-TT-EEEEESS
T ss_pred CCceEEEEEecCCEEEEEec-CCEE--EEECCCCccccccccCCCccceeeEEEEEecC--CceEEEcC-Cc-eEEEecC
Confidence 45789999995555555554 4543 333332211 1111111 22466777763 34554443 44 3344433
Q ss_pred CCeeeEe------ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-
Q 044075 626 QYSCARI------SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD- 697 (786)
Q Consensus 626 ~~~~~~~------~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D- 697 (786)
.++.-.. ..+....+....++ ...+++..|.|+.=. +.+ .-......-...+..+.-+++|+++++++.+
T Consensus 89 gG~tW~~v~l~~~lpgs~~~i~~l~~~-~~~l~~~~G~iy~T~-DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~ 166 (302)
T PF14870_consen 89 GGKTWERVPLSSKLPGSPFGITALGDG-SAELAGDRGAIYRTT-DGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGN 166 (302)
T ss_dssp TTSS-EE----TT-SS-EEEEEEEETT-EEEEEETT--EEEES-STTSSEEEEE-S----EEEEEE-TTS-EEEEETTSS
T ss_pred CCCCcEEeecCCCCCCCeeEEEEcCCC-cEEEEcCCCcEEEeC-CCCCCeeEcccCCcceeEeEEECCCCcEEEEECccc
Confidence 3332211 12333444444343 333344445433321 122 2222233445678888899999999999888
Q ss_pred eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEEC-CCCeEEE-----EcccCCCeEEEEEcCCCC
Q 044075 698 SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNM-AENKCMT-----IAAHDCVISALAQSPVTG 771 (786)
Q Consensus 698 ~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl-~~~~~~~-----~~~h~~~V~slafspdg~ 771 (786)
.+.-||--...-...-......|..+.|.|++...+ .+..|.|++=+. ...+... +....-.+.+++|.+++.
T Consensus 167 ~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~-~~~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~ 245 (302)
T PF14870_consen 167 FYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWM-LARGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNE 245 (302)
T ss_dssp EEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEE-EETTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-
T ss_pred EEEEecCCCccceEEccCccceehhceecCCCCEEE-EeCCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCC
Confidence 667788654322222223458899999999977555 457788887772 2222211 112233489999999887
Q ss_pred EEEEEeCC
Q 044075 772 MVASASHD 779 (786)
Q Consensus 772 ~LaSgs~D 779 (786)
..++|+..
T Consensus 246 ~wa~gg~G 253 (302)
T PF14870_consen 246 IWAVGGSG 253 (302)
T ss_dssp EEEEESTT
T ss_pred EEEEeCCc
Confidence 77766544
No 418
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.20 E-value=0.19 Score=60.92 Aligned_cols=142 Identities=13% Similarity=0.063 Sum_probs=94.2
Q ss_pred CeEEEEEccCCCEEEEE--eCCCcEEEEcCCCCccee----e------eecCCCCCeEEEEEecCCCeEEEEEcCCCcEE
Q 044075 553 IITDVRFRPNSTQLATS--SFDKTVRIWDAAKPNFCL----Q------TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIR 620 (786)
Q Consensus 553 ~V~sl~fspdg~~Lasg--s~Dg~I~VWdl~s~~~~~----~------~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~ 620 (786)
.|..+...+|+...++. +.+-.|.+||+++-.... . +.......+.++.|+|.-...++.+..|+.|+
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 45555556676654443 444578999987533111 1 11122344678889998777777888899999
Q ss_pred EEeCCCCee--eE-eecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec----CCCCEEEEEEcCCCCEEEE
Q 044075 621 FWNLSQYSC--AR-ISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG----HSTEIHSVCWDTNGEYLAS 693 (786)
Q Consensus 621 iwDl~~~~~--~~-~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~----h~~~I~sv~~spdg~~Las 693 (786)
+..+..... .. .+....++++|+|.|..+++|...|++.-|...- +....+.+ ....|.||+|-..-.++++
T Consensus 182 V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~l-eik~~ip~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 182 VKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSL-EIKSEIPEPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred hhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeeccc-ceeecccCCCcCCCcceeEEEEecceeEEEE
Confidence 987764322 12 2335678999999999999999999999887643 32333322 2467999999888777776
Q ss_pred Ee
Q 044075 694 VS 695 (786)
Q Consensus 694 gs 695 (786)
-+
T Consensus 261 y~ 262 (1405)
T KOG3630|consen 261 YG 262 (1405)
T ss_pred ec
Confidence 43
No 419
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.20 E-value=0.21 Score=60.41 Aligned_cols=71 Identities=28% Similarity=0.443 Sum_probs=56.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEE---ccCCCEEEEEeCCCcEEEEcC
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRF---RPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~f---spdg~~Lasgs~Dg~I~VWdl 580 (786)
-.++|+|++|+.+|.+++.|-.+|.|.+||+..++..+.+..|..+++.+-+ ..++..++++...|. +|.+
T Consensus 129 v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 129 VQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred cCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 4679999999999999999999999999999999999988877766665544 334556676666665 4543
No 420
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=95.17 E-value=3.4 Score=43.31 Aligned_cols=185 Identities=14% Similarity=0.114 Sum_probs=121.1
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee
Q 044075 554 ITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS 633 (786)
Q Consensus 554 V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~ 633 (786)
-..|+-.|||..-+++...+.|--.|..+++. ...-.+....-..|..-|++...|+ +....|.-+|-++.+..+..
T Consensus 64 p~dvapapdG~VWft~qg~gaiGhLdP~tGev-~~ypLg~Ga~Phgiv~gpdg~~Wit--d~~~aI~R~dpkt~evt~f~ 140 (353)
T COG4257 64 PFDVAPAPDGAVWFTAQGTGAIGHLDPATGEV-ETYPLGSGASPHGIVVGPDGSAWIT--DTGLAIGRLDPKTLEVTRFP 140 (353)
T ss_pred ccccccCCCCceEEecCccccceecCCCCCce-EEEecCCCCCCceEEECCCCCeeEe--cCcceeEEecCcccceEEee
Confidence 45677778888888888888888888888773 3333444556677888898886662 22225666676665554432
Q ss_pred c------CCeEEEEEeCCCCEEEEEECC---------CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-
Q 044075 634 K------GGTVQVRFQPRLGLLLAAASE---------NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD- 697 (786)
Q Consensus 634 ~------~~i~~i~~sp~g~~Ll~gs~d---------g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D- 697 (786)
- .......|.+.|...+++... +.|++|+.- ....-..||..|||...++.-.+
T Consensus 141 lp~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaP----------qG~gpyGi~atpdGsvwyaslagn 210 (353)
T COG4257 141 LPLEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAP----------QGGGPYGICATPDGSVWYASLAGN 210 (353)
T ss_pred cccccCCCcccceeeCCCccEEEeeccccceecCcccCceeeeccC----------CCCCCcceEECCCCcEEEEecccc
Confidence 1 345667899999988887642 234444332 33456788999999988876666
Q ss_pred eEEEEECCCCeeEEEEccC---CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 698 SVRVWSLASGECIHELSSS---GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 698 ~I~vwDl~s~~~i~~l~~~---~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
.|-..|..++.. ..+... ......+-.+|.+..-++....+.++.||.......
T Consensus 211 aiaridp~~~~a-ev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW~ 267 (353)
T COG4257 211 AIARIDPFAGHA-EVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSWI 267 (353)
T ss_pred ceEEcccccCCc-ceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccce
Confidence 777777776622 122221 234455666778887788777788888887765433
No 421
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=95.10 E-value=3.7 Score=46.29 Aligned_cols=79 Identities=16% Similarity=0.246 Sum_probs=52.7
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEE-EEE-cCC----------------CCEEEEEeC-C
Q 044075 637 TVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHS-VCW-DTN----------------GEYLASVSQ-D 697 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~s-v~~-spd----------------g~~Lasgs~-D 697 (786)
+.+++.+|.+.+.++...-|.|.++|+.++..++.+++..+.=.. +.. ... ..+|+.-.. .
T Consensus 310 ~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyaprR 389 (415)
T PF14655_consen 310 GESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPRR 389 (415)
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEeccC
Confidence 567889999888777766799999999999888888875443211 100 111 113333332 2
Q ss_pred -eEEEEECCCCeeEEEEcc
Q 044075 698 -SVRVWSLASGECIHELSS 715 (786)
Q Consensus 698 -~I~vwDl~s~~~i~~l~~ 715 (786)
.|.||+++.+..+..+..
T Consensus 390 g~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 390 GILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred CeEEEEecCCCCEEEEEEe
Confidence 799999998887776654
No 422
>PLN02153 epithiospecifier protein
Probab=95.09 E-value=3.8 Score=45.11 Aligned_cols=171 Identities=6% Similarity=0.049 Sum_probs=80.8
Q ss_pred CCeEEEEEcCC-----CcEEEEeCCCCeeeEeec--------CCeEEEEEeCCCCEEEEEECC-----------CeEEEE
Q 044075 606 KNDLFCSCDGN-----SEIRFWNLSQYSCARISK--------GGTVQVRFQPRLGLLLAAASE-----------NVVSIF 661 (786)
Q Consensus 606 g~~ll~sgs~D-----g~I~iwDl~~~~~~~~~~--------~~i~~i~~sp~g~~Ll~gs~d-----------g~I~iw 661 (786)
++.+++.|+.+ ..+.+||+.+.+-..... ......+...++..++.|+.+ ..|.+|
T Consensus 85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~y 164 (341)
T PLN02153 85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAY 164 (341)
T ss_pred CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEE
Confidence 45566666643 357888988755433211 111112223344556666643 247788
Q ss_pred EcCCCcEEEEEecCC-----CCEEEEEEcCCCCEEEEEeC--------------CeEEEEECCCCeeEEE--Ec-cCCC-
Q 044075 662 DVETDRLTHSFKGHS-----TEIHSVCWDTNGEYLASVSQ--------------DSVRVWSLASGECIHE--LS-SSGN- 718 (786)
Q Consensus 662 D~~t~~~i~~l~~h~-----~~I~sv~~spdg~~Lasgs~--------------D~I~vwDl~s~~~i~~--l~-~~~~- 718 (786)
|.++.+-.. +.... ..-.+++. -++++++.++. +.|.+||+.+.+-... .. ....
T Consensus 165 d~~~~~W~~-l~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r 242 (341)
T PLN02153 165 NIADGKWVQ-LPDPGENFEKRGGAGFAV-VQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSAR 242 (341)
T ss_pred ECCCCeEee-CCCCCCCCCCCCcceEEE-ECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEeccccCCCCCCc
Confidence 988764322 11110 11112222 34555554431 2588899887642221 10 0111
Q ss_pred ceEEEEEeCCCCEEEEEECC--------------CeEEEEECCCCeEEEEccc------CC--CeEEEEEcCCCCEEEEE
Q 044075 719 KFHSCIFHPSYPTLMVIGGY--------------QSLELWNMAENKCMTIAAH------DC--VISALAQSPVTGMVASA 776 (786)
Q Consensus 719 ~I~sv~fspdg~~L~sgs~d--------------g~I~IwDl~~~~~~~~~~h------~~--~V~slafspdg~~LaSg 776 (786)
...+++ ..++..++.|+.. +.|..||+.+.....+... .. ...++.+.-++.+++.|
T Consensus 243 ~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W~~~~~~~~~~~pr~~~~~~~~~v~~~~~~~~~g 321 (341)
T PLN02153 243 SVFAHA-VVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWEKLGECGEPAMPRGWTAYTTATVYGKNGLLMHG 321 (341)
T ss_pred ceeeeE-EECCEEEEECcccCCccccccccccccccEEEEEcCccEEEeccCCCCCCCCCccccccccccCCcceEEEEc
Confidence 112222 2245566666641 2688899887776544321 11 12233444445567677
Q ss_pred eCC
Q 044075 777 SHD 779 (786)
Q Consensus 777 s~D 779 (786)
+.+
T Consensus 322 G~~ 324 (341)
T PLN02153 322 GKL 324 (341)
T ss_pred CcC
Confidence 664
No 423
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=94.99 E-value=5.9 Score=42.00 Aligned_cols=227 Identities=11% Similarity=0.042 Sum_probs=127.2
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe---eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ---TECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~---~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
--.|+..+ |+++.++..|.-+.+.|+.+.. ....+......-..++.+ |++-..+..|+-+.|-|+.++..+.
T Consensus 130 yaygv~vs--Gn~aYVadlddgfLivdvsdpssP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPv 205 (370)
T COG5276 130 YAYGVYVS--GNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPV 205 (370)
T ss_pred eEEEEEec--CCEEEEeeccCcEEEEECCCCCCceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCe
Confidence 34555555 7788888866667888887533 333444444445667776 7788888999999999998876443
Q ss_pred eeecCCC-CCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec----CCeEEE-EEeCCCCEEEEEECCCeEEEE
Q 044075 588 QTYTGHN-NHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK----GGTVQV-RFQPRLGLLLAAASENVVSIF 661 (786)
Q Consensus 588 ~~~~~h~-~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----~~i~~i-~~sp~g~~Ll~gs~dg~I~iw 661 (786)
..-.-.. ..+.++..+++.. +++. .+.-+.+-|....+....+. ..+.++ .+.-.+++..+...+..+-+.
T Consensus 206 li~~~n~g~g~~sv~vsdnr~--y~vv-y~egvlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~i 282 (370)
T COG5276 206 LIGSYNTGPGTYSVSVSDNRA--YLVV-YDEGVLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPII 282 (370)
T ss_pred EEEEEecCCceEEEEecCCee--EEEE-cccceEEEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeE
Confidence 3222222 2677777775433 2222 24456777777655333322 222222 344455667777777777777
Q ss_pred EcCCCcE---EEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECC
Q 044075 662 DVETDRL---THSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY 738 (786)
Q Consensus 662 D~~t~~~---i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d 738 (786)
|+.+... ...+......-..+.. .+.++..+..++..+.|....+......+....+.++..+-+.+.+.+...+
T Consensus 283 disnp~spfl~ss~~t~g~~a~gi~a--y~~y~yiadkn~g~vV~~s~~s~m~~~~g~~ti~~s~~v~~~~q~~y~~d~~ 360 (370)
T COG5276 283 DISNPPSPFLSSSLDTAGYQAAGIRA--YGNYNYIADKNTGAVVDASPPSMMDKRPGRPTIGQSCDVSVDTQIIYSTDYN 360 (370)
T ss_pred eccCCCCCchhccccCCCccccceEE--ecCeeEeccCCceEEEeCCChhhcccccCcceEeeecceEEEeeEEEEeecC
Confidence 7765421 1111111112222222 2344444444455555555443333333333344555555556677888888
Q ss_pred CeEEEEEC
Q 044075 739 QSLELWNM 746 (786)
Q Consensus 739 g~I~IwDl 746 (786)
+.+.||+.
T Consensus 361 ~gl~i~~~ 368 (370)
T COG5276 361 GGLSIIEY 368 (370)
T ss_pred CCEEEEEe
Confidence 88888875
No 424
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=94.99 E-value=5.3 Score=42.07 Aligned_cols=140 Identities=14% Similarity=0.182 Sum_probs=87.5
Q ss_pred CeEEEEEccCCCEEEEEe---CCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEe-CCCCe
Q 044075 553 IITDVRFRPNSTQLATSS---FDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWN-LSQYS 628 (786)
Q Consensus 553 ~V~sl~fspdg~~Lasgs---~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwD-l~~~~ 628 (786)
.+.+.++++++..++... ....++++...... ...+.+ ..+..-.|.+++. +++....+...+++. ...+.
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~--~~~~~g--~~l~~PS~d~~g~-~W~v~~~~~~~~~~~~~~~g~ 99 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPV--RPVLTG--GSLTRPSWDPDGW-VWTVDDGSGGVRVVRDSASGT 99 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcc--eeeccC--CccccccccCCCC-EEEEEcCCCceEEEEecCCCc
Confidence 688999999999877665 33456666544332 222232 3678889999854 554555566666663 22222
Q ss_pred --eeEeec----CCeEEEEEeCCCCEEEEEEC---CCeEEEEEcCC---C------cEEEEEecCCCCEEEEEEcCCCCE
Q 044075 629 --CARISK----GGTVQVRFQPRLGLLLAAAS---ENVVSIFDVET---D------RLTHSFKGHSTEIHSVCWDTNGEY 690 (786)
Q Consensus 629 --~~~~~~----~~i~~i~~sp~g~~Ll~gs~---dg~I~iwD~~t---~------~~i~~l~~h~~~I~sv~~spdg~~ 690 (786)
.....- +.|..+.++|||..++.... ++.|.+--+.. + ..+.........+..+.|.+++.+
T Consensus 100 ~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L 179 (253)
T PF10647_consen 100 GEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTL 179 (253)
T ss_pred ceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEE
Confidence 221111 27899999999999888773 46777765432 2 111222223567899999999998
Q ss_pred EEEEeCC
Q 044075 691 LASVSQD 697 (786)
Q Consensus 691 Lasgs~D 697 (786)
++.+...
T Consensus 180 ~V~~~~~ 186 (253)
T PF10647_consen 180 VVLGRSA 186 (253)
T ss_pred EEEeCCC
Confidence 8777654
No 425
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=94.98 E-value=0.78 Score=51.20 Aligned_cols=107 Identities=10% Similarity=0.053 Sum_probs=61.9
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEEeCCeEEEE-ECCC-------CeeE-EEEccC----CCceEEEEEeCCCCEEEEEEC
Q 044075 671 SFKGHSTEIHSVCWDTNGEYLASVSQDSVRVW-SLAS-------GECI-HELSSS----GNKFHSCIFHPSYPTLMVIGG 737 (786)
Q Consensus 671 ~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vw-Dl~s-------~~~i-~~l~~~----~~~I~sv~fspdg~~L~sgs~ 737 (786)
.+.........+++.+++ +++ ++...|..| |... .+.+ ..+... ......+.|.|+|.+.++.+.
T Consensus 66 vfa~~l~~p~Gi~~~~~G-lyV-~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~ 143 (367)
T TIGR02604 66 VFAEELSMVTGLAVAVGG-VYV-ATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGN 143 (367)
T ss_pred EeecCCCCccceeEecCC-EEE-eCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEeccc
Confidence 333333456889998988 444 445555544 5432 1122 223221 234678999999986665552
Q ss_pred C-------------------CeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCC
Q 044075 738 Y-------------------QSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHD 779 (786)
Q Consensus 738 d-------------------g~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~D 779 (786)
. +.|.-++..+++...+...-.....++|+++|.++++-..+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 144 TLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred CCCceeccCCCccCcccccCceEEEEecCCCeEEEEecCcCCCccceECCCCCEEEEccCC
Confidence 1 34666666665554433333446789999999887764433
No 426
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=94.97 E-value=9.7 Score=44.38 Aligned_cols=244 Identities=13% Similarity=0.174 Sum_probs=125.3
Q ss_pred cCCCCEEEEEECCCeEEEEEcCCCe---eeeecCCC-CCCeEEEEEccCC-CEEEEEeCCCcEEEEcCCCCcc-eeeeec
Q 044075 518 SSDGKLLASAGHDKKVVVWNMENFQ---TECTPDDH-NHIITDVRFRPNS-TQLATSSFDKTVRIWDAAKPNF-CLQTYT 591 (786)
Q Consensus 518 Spdg~~Lasgs~Dg~V~IWdl~t~~---~~~~l~~h-~~~V~sl~fspdg-~~Lasgs~Dg~I~VWdl~s~~~-~~~~~~ 591 (786)
..++..++.+..+|.+....+.... .+..+ +. ....+++++..++ .+|+.|+.-|.=.++.+..... ++..+.
T Consensus 219 ~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~-g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~ 297 (504)
T PF10433_consen 219 DKDGDRILLQDEDGDLYLLTLDNDGGSISITYL-GTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLP 297 (504)
T ss_dssp STTSSEEEEEETTSEEEEEEEEEEEEEEEEEEE-EE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE-
T ss_pred cCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEc-CCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEecc
Confidence 4467788899999999888876533 12222 22 4556777777655 4777787754444443333221 222333
Q ss_pred CCCCCeEEEEEecC---CC-------eEEEEEc--CCCcEEEEeCCCCe---eeEeec-CCeEEE---EEeC-CCCEEEE
Q 044075 592 GHNNHVMSLDFHPK---KN-------DLFCSCD--GNSEIRFWNLSQYS---CARISK-GGTVQV---RFQP-RLGLLLA 651 (786)
Q Consensus 592 ~h~~~V~sl~~sp~---g~-------~ll~sgs--~Dg~I~iwDl~~~~---~~~~~~-~~i~~i---~~sp-~g~~Ll~ 651 (786)
.-++|.++++.+. +. .++++++ .+|.+++..-.-.- ...... ..+..+ .... ++.+++.
T Consensus 298 -N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~l~~v~~iW~l~~~~~~~~~lv~ 376 (504)
T PF10433_consen 298 -NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSELPGVTGIWTLKLSSSDHSYLVL 376 (504)
T ss_dssp ----SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEEESTEEEEEEE-SSSSSBSEEEE
T ss_pred -CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccCCCCceEEEEeeecCCCceEEEE
Confidence 3478999888632 12 4554443 56788887432111 111111 223332 2111 1445655
Q ss_pred EECCCeEEEEEcC---CCcEEEEEe--c---CCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccC-CCceEE
Q 044075 652 AASENVVSIFDVE---TDRLTHSFK--G---HSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSS-GNKFHS 722 (786)
Q Consensus 652 gs~dg~I~iwD~~---t~~~i~~l~--~---h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~-~~~I~s 722 (786)
...+ .-.++.+. ..+.+..+. + ....+.+-.+. +..++=.....|++.+...++....+... ...|.+
T Consensus 377 S~~~-~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~--~~~ivQVt~~~i~l~~~~~~~~~~~w~~~~~~~I~~ 453 (504)
T PF10433_consen 377 SFPN-ETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVG--DGRIVQVTPKGIRLIDLEDGKLTQEWKPPAGSIIVA 453 (504)
T ss_dssp EESS-EEEEEEES----SSEEEEE---TS-SSS-EEEEEEET--TTEEEEEESSEEEEEESSSTSEEEEEE-TTS---SE
T ss_pred EcCC-ceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcC--CCeEEEEecCeEEEEECCCCeEEEEEeCCCCCeEEE
Confidence 5554 44455553 333332221 1 12223333332 66677777778999998888777666443 344555
Q ss_pred EEEeCCCCEEEEEECCCeEEEEECCCCeEEEE-c-----ccCCCeEEEEEcC
Q 044075 723 CIFHPSYPTLMVIGGYQSLELWNMAENKCMTI-A-----AHDCVISALAQSP 768 (786)
Q Consensus 723 v~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~-~-----~h~~~V~slafsp 768 (786)
.+.. +.+++.+..++.+.++.+........ . .....|.|+...|
T Consensus 454 a~~~--~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p 503 (504)
T PF10433_consen 454 ASIN--DPQVLVALSGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP 503 (504)
T ss_dssp EEES--SSEEEEEE-TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred EEEC--CCEEEEEEeCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence 5554 35788888888999998887766421 1 2567889888776
No 427
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=94.87 E-value=8.8 Score=43.43 Aligned_cols=140 Identities=11% Similarity=0.189 Sum_probs=83.5
Q ss_pred CCEEEEEeCCCcEEEEcCCCCcce---eeeecCCCCCeEEEEEec---CCC-eEEEEEcCCCcEEEEeCCCC--e-----
Q 044075 563 STQLATSSFDKTVRIWDAAKPNFC---LQTYTGHNNHVMSLDFHP---KKN-DLFCSCDGNSEIRFWNLSQY--S----- 628 (786)
Q Consensus 563 g~~Lasgs~Dg~I~VWdl~s~~~~---~~~~~~h~~~V~sl~~sp---~g~-~ll~sgs~Dg~I~iwDl~~~--~----- 628 (786)
...|++|+.+|.++||+....... +..-..-..+|..+..-. ... ..+ +.=.-..+.+|.+... .
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~L-aVLhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQL-AVLHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceE-EEecCCEEEEEEEEecCCCcccCc
Confidence 458999999999999998654421 222223456787777542 112 222 2233466777766211 0
Q ss_pred -----eeEee--cCCeEEEEEeCC-----CCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC
Q 044075 629 -----CARIS--KGGTVQVRFQPR-----LGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ 696 (786)
Q Consensus 629 -----~~~~~--~~~i~~i~~sp~-----g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~ 696 (786)
....+ ......+++-+- ..++.+-+-||.+.+|+-+.....+.+.. ---.-.++|.+.-+.|++++.
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~ss 194 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTASS 194 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEecC
Confidence 11111 122333443332 35677888899999999886654444443 222334678888888998888
Q ss_pred C-eEEEEEC
Q 044075 697 D-SVRVWSL 704 (786)
Q Consensus 697 D-~I~vwDl 704 (786)
+ .|..|..
T Consensus 195 s~~l~~Yky 203 (418)
T PF14727_consen 195 SWTLECYKY 203 (418)
T ss_pred ceeEEEecH
Confidence 8 8888865
No 428
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=94.72 E-value=7.6 Score=42.00 Aligned_cols=265 Identities=9% Similarity=0.041 Sum_probs=120.6
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC-Ce---eeeec-CC-CCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN-FQ---TECTP-DD-HNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t-~~---~~~~l-~~-h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s 582 (786)
...+.+|.|..+..-+|+| ..+.| +...+ ++ ....- .. ......+|.|..+ ..+++ +..+. .+...+.
T Consensus 16 ~~~l~dV~F~d~~~G~~VG-~~g~i--l~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~-~g~iv-G~~g~-ll~T~Dg 89 (302)
T PF14870_consen 16 DKPLLDVAFVDPNHGWAVG-AYGTI--LKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGN-EGWIV-GEPGL-LLHTTDG 89 (302)
T ss_dssp SS-EEEEEESSSS-EEEEE-TTTEE--EEESSTTSS-EE-----S-----EEEEEEEETT-EEEEE-EETTE-EEEESST
T ss_pred CCceEEEEEecCCEEEEEe-cCCEE--EEECCCCccccccccCCCccceeeEEEEEecCC-ceEEE-cCCce-EEEecCC
Confidence 3479999999655556665 45543 33332 22 21111 11 1224667887643 34444 44453 3333333
Q ss_pred Ccceeee-ec-CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee----eEeecCCeEEEEEeCCCCEEEEEECCC
Q 044075 583 PNFCLQT-YT-GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC----ARISKGGTVQVRFQPRLGLLLAAASEN 656 (786)
Q Consensus 583 ~~~~~~~-~~-~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~----~~~~~~~i~~i~~sp~g~~Ll~gs~dg 656 (786)
++.-... +. .-.+....+....++ ..++.+ ..|.|+.= .+.++. .....+.+..+..++++.+++++....
T Consensus 90 G~tW~~v~l~~~lpgs~~~i~~l~~~-~~~l~~-~~G~iy~T-~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~ 166 (302)
T PF14870_consen 90 GKTWERVPLSSKLPGSPFGITALGDG-SAELAG-DRGAIYRT-TDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGN 166 (302)
T ss_dssp TSS-EE----TT-SS-EEEEEEEETT-EEEEEE-TT--EEEE-SSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSS
T ss_pred CCCcEEeecCCCCCCCeeEEEEcCCC-cEEEEc-CCCcEEEe-CCCCCCeeEcccCCcceeEeEEECCCCcEEEEECccc
Confidence 3321111 11 122334444444443 333333 34444332 122221 112235667778889999888887766
Q ss_pred eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEEC-CCCeeEEE----EccCCCceEEEEEeCCCCE
Q 044075 657 VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSL-ASGECIHE----LSSSGNKFHSCIFHPSYPT 731 (786)
Q Consensus 657 ~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl-~s~~~i~~----l~~~~~~I~sv~fspdg~~ 731 (786)
.+.-||--...-...-......|..+.|.+++.+.+.+....|++=+. ...+.-.. +......+..++|.++...
T Consensus 167 ~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~ 246 (302)
T PF14870_consen 167 FYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEI 246 (302)
T ss_dssp EEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-E
T ss_pred EEEEecCCCccceEEccCccceehhceecCCCCEEEEeCCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCE
Confidence 667787654322222223567899999999988877664337777762 22222111 1122344789999988665
Q ss_pred EEEEECCCeEEEEECCCCeEEEEc----ccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 732 LMVIGGYQSLELWNMAENKCMTIA----AHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 732 L~sgs~dg~I~IwDl~~~~~~~~~----~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
.+ ++..|.+. ...+.++.-... .-...++.|.|....+-++ .+.||.|.-|
T Consensus 247 wa-~gg~G~l~-~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~-lG~~G~ll~~ 301 (302)
T PF14870_consen 247 WA-VGGSGTLL-VSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFV-LGQDGVLLRY 301 (302)
T ss_dssp EE-EESTT-EE-EESSTTSS-EE-GGGTTSSS---EEEEEETTEEEE-E-STTEEEEE
T ss_pred EE-EeCCccEE-EeCCCCccceECccccCCCCceEEEEEcCCCceEE-ECCCcEEEEe
Confidence 44 55555443 455555543222 2355688899876654444 5678888766
No 429
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=94.71 E-value=0.064 Score=54.35 Aligned_cols=135 Identities=17% Similarity=0.127 Sum_probs=80.4
Q ss_pred EEEEECCCeEEEEEcCCCcEEEEEe-cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEE-EccCCCceE-EEE
Q 044075 649 LLAAASENVVSIFDVETDRLTHSFK-GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHE-LSSSGNKFH-SCI 724 (786)
Q Consensus 649 Ll~gs~dg~I~iwD~~t~~~i~~l~-~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~-l~~~~~~I~-sv~ 724 (786)
+.+.+.++.|.-++++..+....-. .|... ..+ ..-+.-+++|+.+ .|.+|...-...... +......|. .+.
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~-~~v--~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip 109 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKESCRSERFIDEG-QRV--VTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIP 109 (238)
T ss_pred hccccCCcccccchhhhhhhhhhhhhhhhcc-eee--cccCceEEeecccceEEEecCCccchHHHhhhcccccceeccc
Confidence 4555667777777776543221111 12222 111 1224457777777 888887762211111 111112222 223
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCeEEEEc-ccC-CCeEEEEEcCCCCEEEEE--eCCCcEEEeC
Q 044075 725 FHPSYPTLMVIGGYQSLELWNMAENKCMTIA-AHD-CVISALAQSPVTGMVASA--SHDKSVKIWK 786 (786)
Q Consensus 725 fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~-~h~-~~V~slafspdg~~LaSg--s~DG~I~IWd 786 (786)
.-.++.+.++++.++.|+.|++.-++.+... .|. .++..+..+..+++|+++ |.|..++.|+
T Consensus 110 ~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ 175 (238)
T KOG2444|consen 110 NGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWN 175 (238)
T ss_pred cccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcc
Confidence 3345568889999999999999988888554 455 567777777777788888 8888888885
No 430
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=94.65 E-value=8 Score=41.91 Aligned_cols=229 Identities=12% Similarity=-0.011 Sum_probs=111.4
Q ss_pred CCCEEEEEECCCeEEEEEcCC--CeeeeecCCCCCCeEEEEEccCCCEEEEEe-CCCcEEEEcCCCCcc-----------
Q 044075 520 DGKLLASAGHDKKVVVWNMEN--FQTECTPDDHNHIITDVRFRPNSTQLATSS-FDKTVRIWDAAKPNF----------- 585 (786)
Q Consensus 520 dg~~Lasgs~Dg~V~IWdl~t--~~~~~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~I~VWdl~s~~~----------- 585 (786)
++++|+.|+.+|.. +.++.+ .+....+ +...|+++...+..+.|++-+ ....++++++..-..
T Consensus 12 ~~~~lL~GTe~Gly-~~~~~~~~~~~~kl~--~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L~~~~~~~~~~~~~ 88 (302)
T smart00036 12 DGKWLLVGTEEGLY-VLNISDQPGTLEKLI--GRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKEALGSARLV 88 (302)
T ss_pred CCcEEEEEeCCceE-EEEcccCCCCeEEec--CcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHhhhhhhccCCcccc
Confidence 34689999999854 445654 3333333 456899999998777666555 334499998843221
Q ss_pred ---eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC----eeeEe------ec-CCeEEEEEeC--CCCEE
Q 044075 586 ---CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY----SCARI------SK-GGTVQVRFQP--RLGLL 649 (786)
Q Consensus 586 ---~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~----~~~~~------~~-~~i~~i~~sp--~g~~L 649 (786)
......+|......+.+......+++.+....+|.++..... ...+. .. ..+..+..++ ....+
T Consensus 89 ~~~~~~~~~~~tkGc~~~~v~~~~~~~~l~~A~~~~i~l~~~~~~~~~f~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (302)
T smart00036 89 IRKNVLTKIPDTKGCHLCAVVNGKRSLFLCVALQSSVVLLQWYNPLKKFKLFKSKFLFPLISPVPVFVELVSSSFERPGI 168 (302)
T ss_pred ccccceEeCCcCCceEEEEEEcCCCcEEEEEEcCCeEEEEEccChhhhhhhhcccccccCCCCccceEeeecccccceEE
Confidence 011122344333333333222223333344556666543321 11111 11 1122222222 24567
Q ss_pred EEEECCCeEEEEEcCC--CcEEE-----EEecCC-CCEEEEEEcCCCCEEEEEeCCeEEEEECCC-Ce-eEEEEccCCCc
Q 044075 650 LAAASENVVSIFDVET--DRLTH-----SFKGHS-TEIHSVCWDTNGEYLASVSQDSVRVWSLAS-GE-CIHELSSSGNK 719 (786)
Q Consensus 650 l~gs~dg~I~iwD~~t--~~~i~-----~l~~h~-~~I~sv~~spdg~~Lasgs~D~I~vwDl~s-~~-~i~~l~~~~~~ 719 (786)
.+|+..+...++++.. ..... ...... .++..+. -+++. ++.+-++...+.|... .. ....+. -...
T Consensus 169 cvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~~~~~~p~~i~~-l~~~e-~Llc~~~~~v~Vn~~G~~~~r~~~l~-w~~~ 245 (302)
T smart00036 169 CIGSDKGGGDVVQFHESLVSKEDLSLPFLSEETSLKPISVVQ-VPRDE-FLLCYDEFGVFVNLYGKRRSRNPILH-WEFM 245 (302)
T ss_pred EEEEcCCCCeEEEEeecccccccccccccccccccCceEEEE-ECCCe-EEEEECcEEEEEeCCCCccccceEEE-cCCc
Confidence 7777653344444432 11000 011111 2333333 34444 4445555444445442 11 111221 2344
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEccc
Q 044075 720 FHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAH 757 (786)
Q Consensus 720 I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h 757 (786)
..++++. .++|++...+ .|.|+++.++..+....+
T Consensus 246 p~~~~~~--~pyll~~~~~-~ievr~l~~~~l~q~i~~ 280 (302)
T smart00036 246 PESFAYH--SPYLLAFHDN-GIEIRSIKTGELLQELAD 280 (302)
T ss_pred ccEEEEE--CCEEEEEcCC-cEEEEECCCCceEEEEec
Confidence 5667776 3577777654 599999999987755544
No 431
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=94.63 E-value=9.2 Score=42.56 Aligned_cols=192 Identities=16% Similarity=0.176 Sum_probs=112.1
Q ss_pred CCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEcc----CCCE--EEEEe-CC---CcEEEEcCCCCcceee
Q 044075 519 SDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRP----NSTQ--LATSS-FD---KTVRIWDAAKPNFCLQ 588 (786)
Q Consensus 519 pdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fsp----dg~~--Lasgs-~D---g~I~VWdl~s~~~~~~ 588 (786)
|...+|+....++-+.+||+.- +.+..+. .+.++.|.... +++. |++++ .+ .+|++|.+......+.
T Consensus 66 p~kSlIigTdK~~GL~VYdL~G-k~lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~ 142 (381)
T PF02333_consen 66 PAKSLIIGTDKKGGLYVYDLDG-KELQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELT 142 (381)
T ss_dssp GGG-EEEEEETTTEEEEEETTS--EEEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEE
T ss_pred cccceEEEEeCCCCEEEEcCCC-cEEEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcce
Confidence 3455777778888999999875 4444443 23344433321 3432 44443 32 4699998763222233
Q ss_pred eecC-------CCCCeEEEEEe--c-CCCeEEEEEcCCCcEEEEeCC---CC----eeeEeec--CCeEEEEEeCCCCEE
Q 044075 589 TYTG-------HNNHVMSLDFH--P-KKNDLFCSCDGNSEIRFWNLS---QY----SCARISK--GGTVQVRFQPRLGLL 649 (786)
Q Consensus 589 ~~~~-------h~~~V~sl~~s--p-~g~~ll~sgs~Dg~I~iwDl~---~~----~~~~~~~--~~i~~i~~sp~g~~L 649 (786)
.+.. ....+..+|+. + ++...++..+.+|.+..|.+. .+ +.++.+. ..+..|........|
T Consensus 143 ~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~L 222 (381)
T PF02333_consen 143 DVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGRL 222 (381)
T ss_dssp E-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEE
T ss_pred EcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCCE
Confidence 3221 12346777764 3 356666677888999888774 22 3445444 566778888888999
Q ss_pred EEEECCCeEEEEEcCCC-----cEEEEEec--CCCCEEEEEEcC--CC-CEEEEEeCC--eEEEEECCCC-eeEEEE
Q 044075 650 LAAASENVVSIFDVETD-----RLTHSFKG--HSTEIHSVCWDT--NG-EYLASVSQD--SVRVWSLASG-ECIHEL 713 (786)
Q Consensus 650 l~gs~dg~I~iwD~~t~-----~~i~~l~~--h~~~I~sv~~sp--dg-~~Lasgs~D--~I~vwDl~s~-~~i~~l 713 (786)
+++-++.-|..|+.+-. ..+....+ ....|-.|++-. ++ .||++.+.+ +..|||.... ..+..|
T Consensus 223 YvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~~~~~g~f 299 (381)
T PF02333_consen 223 YVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGPNAYVGSF 299 (381)
T ss_dssp EEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT--EEEEE
T ss_pred EEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCCCcccceE
Confidence 99999999999998732 23333332 345677887743 43 377777665 8999998753 444444
No 432
>PRK13684 Ycf48-like protein; Provisional
Probab=94.59 E-value=8.9 Score=42.18 Aligned_cols=105 Identities=12% Similarity=0.155 Sum_probs=62.7
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCeE-EEEECCCCe-eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEE
Q 044075 676 STEIHSVCWDTNGEYLASVSQDSV-RVWSLASGE-CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMT 753 (786)
Q Consensus 676 ~~~I~sv~~spdg~~Lasgs~D~I-~vwDl~s~~-~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~ 753 (786)
...+.++.+.+++.+++++..+.+ +.+|-. ++ -..........+.++.+.++++.+++ +..|.+++=..+.+....
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~~G~i~~s~~~g-g~tW~~~~~~~~~~l~~i~~~~~g~~~~v-g~~G~~~~~s~d~G~sW~ 249 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSSRGNFYSTWEPG-QTAWTPHQRNSSRRLQSMGFQPDGNLWML-ARGGQIRFNDPDDLESWS 249 (334)
T ss_pred cceEEEEEECCCCeEEEEeCCceEEEEcCCC-CCeEEEeeCCCcccceeeeEcCCCCEEEE-ecCCEEEEccCCCCCccc
Confidence 456889999999988887777733 333322 22 11112234567889999999886655 455665432344444332
Q ss_pred E-cc----cCCCeEEEEEcCCCCEEEEEeCCCcEE
Q 044075 754 I-AA----HDCVISALAQSPVTGMVASASHDKSVK 783 (786)
Q Consensus 754 ~-~~----h~~~V~slafspdg~~LaSgs~DG~I~ 783 (786)
. .. ....+.++.|.+++.+++ ++.+|.|.
T Consensus 250 ~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~ 283 (334)
T PRK13684 250 KPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL 283 (334)
T ss_pred cccCCccccccceeeEEEcCCCCEEE-EcCCCeEE
Confidence 1 11 123578899998876555 44566554
No 433
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=94.56 E-value=0.11 Score=39.63 Aligned_cols=35 Identities=29% Similarity=0.544 Sum_probs=30.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCee
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQT 543 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~ 543 (786)
....|.+++|+|..++||.+..+|.|.||.+ +++.
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 3456999999999999999999999999998 4443
No 434
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=94.50 E-value=7.1 Score=47.36 Aligned_cols=95 Identities=15% Similarity=0.212 Sum_probs=57.1
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee
Q 044075 551 NHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA 630 (786)
Q Consensus 551 ~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~ 630 (786)
...|..|.++|+|.+|+..|..| |.|-.+.........+.+-...|.|-.+. -+..++ ...
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~-v~~~~~-~~~---------------- 144 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVP-VDERFF-TSN---------------- 144 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEE-echhhc-cCC----------------
Confidence 34688999999999999988765 44444432111112233333344444333 223233 111
Q ss_pred EeecCCeEEEEEeCC---CCEEEEEECCCeEEEEEcCCC
Q 044075 631 RISKGGTVQVRFQPR---LGLLLAAASENVVSIFDVETD 666 (786)
Q Consensus 631 ~~~~~~i~~i~~sp~---g~~Ll~gs~dg~I~iwD~~t~ 666 (786)
....+..+.|+|. +.+|++-++|+.+++||+...
T Consensus 145 --~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 145 --SSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred --CCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 1134567888886 478999999999999998754
No 435
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.48 E-value=1.4 Score=44.30 Aligned_cols=174 Identities=10% Similarity=0.093 Sum_probs=104.0
Q ss_pred CCCEEEEEeC--CCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEE
Q 044075 562 NSTQLATSSF--DKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQ 639 (786)
Q Consensus 562 dg~~Lasgs~--Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~ 639 (786)
++.++.+.+. ...|++||+.+++.....-.. ...+..=-...-++.+....-.+|.-..+|.++.+++..+...-..
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~-~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~GeG 133 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLA-PDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGEG 133 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecC-CccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCcc
Confidence 4556665554 346999999987743322221 1122221122224555556667888999999998888776644333
Q ss_pred EEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec--CC---CCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEE
Q 044075 640 VRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG--HS---TEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHEL 713 (786)
Q Consensus 640 i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~--h~---~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l 713 (786)
-....++..|+.+....+++.-|.++.....++.. .. ..++.+.| -+|.+.+-.-.. .|...|..+|+.+..+
T Consensus 134 WgLt~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~-VdG~lyANVw~t~~I~rI~p~sGrV~~wi 212 (262)
T COG3823 134 WGLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEW-VDGELYANVWQTTRIARIDPDSGRVVAWI 212 (262)
T ss_pred eeeecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceee-eccEEEEeeeeecceEEEcCCCCcEEEEE
Confidence 44445666677777777888888777644443321 11 23344555 356666655555 7777788888777655
Q ss_pred cc------------CCCceEEEEEeCCCCEEEEEEC
Q 044075 714 SS------------SGNKFHSCIFHPSYPTLMVIGG 737 (786)
Q Consensus 714 ~~------------~~~~I~sv~fspdg~~L~sgs~ 737 (786)
.. +.+....+++.|+...++..+.
T Consensus 213 dlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTGK 248 (262)
T COG3823 213 DLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITGK 248 (262)
T ss_pred EccCCchhcCccccccccccceeecCcCCeEEEecC
Confidence 32 2345677889888865555543
No 436
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=94.36 E-value=11 Score=42.42 Aligned_cols=144 Identities=10% Similarity=0.055 Sum_probs=82.1
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCe-----eEEE
Q 044075 638 VQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGE-----CIHE 712 (786)
Q Consensus 638 ~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~-----~i~~ 712 (786)
..+...+++..++++.....++-||--...-...-......+..+.|.+++.+++++..+.+ ++....+. ....
T Consensus 242 ~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~G~l-~~S~d~G~~~~~~~f~~ 320 (398)
T PLN00033 242 STVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLTRGGGL-YVSKGTGLTEEDFDFEE 320 (398)
T ss_pred eeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEeCCceE-EEecCCCCcccccceee
Confidence 34455677666655555433334443221101111223556889999999998887755543 33334442 2222
Q ss_pred Ecc--CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEE----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 713 LSS--SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTI----AAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 713 l~~--~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~----~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
+.. ....+..+.|.+++. +++++..|.+.... ..++.... ..-...++.+.|.++++.+++ +.+|.|.-|
T Consensus 321 ~~~~~~~~~l~~v~~~~d~~-~~a~G~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~-G~~G~il~~ 396 (398)
T PLN00033 321 ADIKSRGFGILDVGYRSKKE-AWAAGGSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVL-GNDGVLLRY 396 (398)
T ss_pred cccCCCCcceEEEEEcCCCc-EEEEECCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEE-eCCcEEEEe
Confidence 222 223588899987766 66667777666653 44444322 233457889999877665554 568887765
No 437
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=94.21 E-value=8.9 Score=41.26 Aligned_cols=159 Identities=11% Similarity=0.130 Sum_probs=90.9
Q ss_pred cEEEEeCCCCeeeEeec---------CCeEEEEEeCCC-----CEEEEEEC-CCeEEEEEcCCCcEEEEEecC-------
Q 044075 618 EIRFWNLSQYSCARISK---------GGTVQVRFQPRL-----GLLLAAAS-ENVVSIFDVETDRLTHSFKGH------- 675 (786)
Q Consensus 618 ~I~iwDl~~~~~~~~~~---------~~i~~i~~sp~g-----~~Ll~gs~-dg~I~iwD~~t~~~i~~l~~h------- 675 (786)
.|.+||+.+.+.++.+. .....+.+.... .+++.+.. .+-|.|||+.+++..+.+..+
T Consensus 35 KLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~ 114 (287)
T PF03022_consen 35 KLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDA 114 (287)
T ss_dssp EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SS
T ss_pred EEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccc
Confidence 56677777776655433 234566665532 34444444 368999999998765554321
Q ss_pred ------------CCCEEEEEEcC---CCCEEEEEeCCeEEEEECCC-----C---------eeEEEEccCCCceEEEEEe
Q 044075 676 ------------STEIHSVCWDT---NGEYLASVSQDSVRVWSLAS-----G---------ECIHELSSSGNKFHSCIFH 726 (786)
Q Consensus 676 ------------~~~I~sv~~sp---dg~~Lasgs~D~I~vwDl~s-----~---------~~i~~l~~~~~~I~sv~fs 726 (786)
...+..++.+| +++.|+-+.-...++|.+.+ . +.+..+-........++++
T Consensus 115 ~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~~D 194 (287)
T PF03022_consen 115 GPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSRKLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQSDGMAID 194 (287)
T ss_dssp EEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-SEEEEEEHHHHCSTT--HHH-HHHT-EEEEE---SECEEEEE
T ss_pred cceeccCceEecCCCccccccCCCCCCccEEEEEeCCCCcEEEEEHHHhhCccccccccccccceeccccCCCCceEEEC
Confidence 22356667655 66777766554344444332 1 1122322222456678899
Q ss_pred CCCCEEEEEECCCeEEEEECCC-----CeEEEEcc-c-CCCeEEEEEcC--CCCEEEEE
Q 044075 727 PSYPTLMVIGGYQSLELWNMAE-----NKCMTIAA-H-DCVISALAQSP--VTGMVASA 776 (786)
Q Consensus 727 pdg~~L~sgs~dg~I~IwDl~~-----~~~~~~~~-h-~~~V~slafsp--dg~~LaSg 776 (786)
++|..+++--..+.|..|+..+ ...+.... . -..+.++.+.+ ++.+.+.+
T Consensus 195 ~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~s 253 (287)
T PF03022_consen 195 PNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLS 253 (287)
T ss_dssp TTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE
T ss_pred CCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEE
Confidence 9998888888889999999987 22222222 2 34678899998 77655544
No 438
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=94.20 E-value=11 Score=41.83 Aligned_cols=191 Identities=12% Similarity=0.076 Sum_probs=104.4
Q ss_pred CCCEEEEEECCCeEEEEEcCCCeeeeecCCC--CCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCC-CC
Q 044075 520 DGKLLASAGHDKKVVVWNMENFQTECTPDDH--NHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHN-NH 596 (786)
Q Consensus 520 dg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h--~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~-~~ 596 (786)
+++ ++++..+|.|.-.|.+++..+-....- ...+.+-.+..+|+ |++++.++.++.+|..++.. +....... ..
T Consensus 68 dg~-v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~-~W~~~~~~~~~ 144 (370)
T COG1520 68 DGT-VYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTL-VWSRNVGGSPY 144 (370)
T ss_pred CCe-EEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcE-EEEEecCCCeE
Confidence 444 445567888888888888765433222 12333333333665 77788899888888877663 33333332 11
Q ss_pred eEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCe-EE--EEE--eCCCCEEEEEEC--CCeEEEEEcCCCcEE
Q 044075 597 VMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGT-VQ--VRF--QPRLGLLLAAAS--ENVVSIFDVETDRLT 669 (786)
Q Consensus 597 V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i-~~--i~~--sp~g~~Ll~gs~--dg~I~iwD~~t~~~i 669 (786)
+..-....+ ..+..++.++.+...|..+++..-...... .. +.. ......++++.. ++.+.-+|.+++...
T Consensus 145 ~~~~~v~~~--~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~~~ 222 (370)
T COG1520 145 YASPPVVGD--GTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASGTVYVGSDGYDGILYALNAEDGTLK 222 (370)
T ss_pred EecCcEEcC--cEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecceEEEecCCCcceEEEEEccCCcEe
Confidence 112122222 233344467888888888777654433211 11 111 123345666666 667888899888877
Q ss_pred EEEecC----CCCE--E-EE---EEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC
Q 044075 670 HSFKGH----STEI--H-SV---CWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS 716 (786)
Q Consensus 670 ~~l~~h----~~~I--~-sv---~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~ 716 (786)
...+.+ ...+ . .+ ...-++. ++.++.+ .+...|..+++.+..+...
T Consensus 223 w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-~~~~~~~g~~~~l~~~~G~~~W~~~~~ 279 (370)
T COG1520 223 WSQKVSQTIGRTAISTTPAVDGGPVYVDGG-VYAGSYGGKLLCLDADTGELIWSFPAG 279 (370)
T ss_pred eeeeeecccCcccccccccccCceEEECCc-EEEEecCCeEEEEEcCCCceEEEEecc
Confidence 764321 1111 0 11 0111222 2344445 7888999999988887663
No 439
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=94.02 E-value=1.3 Score=52.34 Aligned_cols=128 Identities=11% Similarity=0.180 Sum_probs=86.4
Q ss_pred ccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC-CCCCCeEEEEEc--cCCCEEEEEeC
Q 044075 495 KAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD-DHNHIITDVRFR--PNSTQLATSSF 571 (786)
Q Consensus 495 ~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~-~h~~~V~sl~fs--pdg~~Lasgs~ 571 (786)
....|....++......+.-+.-|.-++..++-+....+.|||...+.....-. ...+.|.++.|. |++..+++.+.
T Consensus 15 ~~~~w~~t~~~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf 94 (631)
T PF12234_consen 15 NKIEWLLTSTFETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGF 94 (631)
T ss_pred CeEEEEEEEEEecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEc
Confidence 345666777777777777777777766666665556689999998876544332 456789999996 48889999999
Q ss_pred CCcEEEEcCC-----CCc--c-eee--eecCCC-CCeEEEEEecCCCeEEEEEcCCCcEEEEeCC
Q 044075 572 DKTVRIWDAA-----KPN--F-CLQ--TYTGHN-NHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS 625 (786)
Q Consensus 572 Dg~I~VWdl~-----s~~--~-~~~--~~~~h~-~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~ 625 (786)
...|.+|.-. +.. . .++ .+..|+ .+|.+..|.++|..++++ ++.+.|+|-.
T Consensus 95 ~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s---GNqlfv~dk~ 156 (631)
T PF12234_consen 95 PHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS---GNQLFVFDKW 156 (631)
T ss_pred CcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe---CCEEEEECCC
Confidence 9999998432 111 1 111 123344 579999999887644433 4567777643
No 440
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=93.75 E-value=8.1 Score=47.26 Aligned_cols=170 Identities=11% Similarity=0.023 Sum_probs=85.3
Q ss_pred EEEEcCCCcEEEEeCCCCeeeEeecC--Ce-------------EEEEEeC--CCCEEEEEEC----------CCeEEEEE
Q 044075 610 FCSCDGNSEIRFWNLSQYSCARISKG--GT-------------VQVRFQP--RLGLLLAAAS----------ENVVSIFD 662 (786)
Q Consensus 610 l~sgs~Dg~I~iwDl~~~~~~~~~~~--~i-------------~~i~~sp--~g~~Ll~gs~----------dg~I~iwD 662 (786)
++.++.|+.|.-.|.++++.+..+.. .+ ..+.-.| .++.+++++. +|.|+-||
T Consensus 263 V~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~D 342 (764)
T TIGR03074 263 IILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFD 342 (764)
T ss_pred EEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEE
Confidence 34677799999999998887754321 11 0011111 1356777653 58899999
Q ss_pred cCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCe
Q 044075 663 VETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQS 740 (786)
Q Consensus 663 ~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~ 740 (786)
+++++.+..+..-....... -+.++....++.+ ...-+|.+.+....-. +...+ .+....+........+.
T Consensus 343 a~TGkl~W~~~~g~p~~~~~--~~~g~~~~~gg~n~W~~~s~D~~~glvy~pt-Gn~~p----d~~g~~r~~~~n~y~~s 415 (764)
T TIGR03074 343 VNTGALVWAWDPGNPDPTAP--PAPGETYTRNTPNSWSVASYDEKLGLVYLPM-GNQTP----DQWGGDRTPADEKYSSS 415 (764)
T ss_pred CCCCcEeeEEecCCCCcccC--CCCCCEeccCCCCccCceEEcCCCCeEEEeC-CCccc----cccCCccccCcccccce
Confidence 99999998886311111111 1234433333333 4555666655432211 11110 01000000001112456
Q ss_pred EEEEECCCCeEEEEc---ccCC-------CeEEEEEcC-CCC---EEEEEeCCCcEEEeC
Q 044075 741 LELWNMAENKCMTIA---AHDC-------VISALAQSP-VTG---MVASASHDKSVKIWK 786 (786)
Q Consensus 741 I~IwDl~~~~~~~~~---~h~~-------~V~slafsp-dg~---~LaSgs~DG~I~IWd 786 (786)
|.-.|.++++..-.. .|+- ...-+.+.. +|+ .|+.++.+|.+.+.|
T Consensus 416 lvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlD 475 (764)
T TIGR03074 416 LVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLD 475 (764)
T ss_pred EEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEE
Confidence 777788888776222 2210 111112222 453 788888888888765
No 441
>PHA02790 Kelch-like protein; Provisional
Probab=93.69 E-value=3.3 Score=48.04 Aligned_cols=178 Identities=7% Similarity=-0.019 Sum_probs=83.9
Q ss_pred CCCEEEEEECCC-----eEEEEEcCCCeeee--ecCCCCCCeEEEEEccCCCEEEEEeCC--CcEEEEcCCCCcceee-e
Q 044075 520 DGKLLASAGHDK-----KVVVWNMENFQTEC--TPDDHNHIITDVRFRPNSTQLATSSFD--KTVRIWDAAKPNFCLQ-T 589 (786)
Q Consensus 520 dg~~Lasgs~Dg-----~V~IWdl~t~~~~~--~l~~h~~~V~sl~fspdg~~Lasgs~D--g~I~VWdl~s~~~~~~-~ 589 (786)
++.++++||.++ .+..||..+.+-.. .+.........+. -++.+.++|+.+ .++..||..++..... .
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~--~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~ 348 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVP--ANNKLYVVGGLPNPTSVERWFHGDAAWVNMPS 348 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEE--ECCEEEEECCcCCCCceEEEECCCCeEEECCC
Confidence 355667776543 46778877644322 2221111122222 357777777764 3578888766543211 1
Q ss_pred ecCCCCCeEEEEEecCCCeEEEEEcCCC---cEEEEeCCCCeeeEeec--CCe-EEEEEeCCCCEEEEEECCCeEEEEEc
Q 044075 590 YTGHNNHVMSLDFHPKKNDLFCSCDGNS---EIRFWNLSQYSCARISK--GGT-VQVRFQPRLGLLLAAASENVVSIFDV 663 (786)
Q Consensus 590 ~~~h~~~V~sl~~sp~g~~ll~sgs~Dg---~I~iwDl~~~~~~~~~~--~~i-~~i~~sp~g~~Ll~gs~dg~I~iwD~ 663 (786)
+....... +++.. ++.+++.|+.++ .+..||.++..-..... .+. ......-++..+++| |.+.+||.
T Consensus 349 l~~~r~~~-~~~~~--~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~G---G~~e~ydp 422 (480)
T PHA02790 349 LLKPRCNP-AVASI--NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG---RNAEFYCE 422 (480)
T ss_pred CCCCCccc-EEEEE--CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEEC---CceEEecC
Confidence 11111111 22222 356666776543 46788887654433221 111 111222344444444 45778888
Q ss_pred CCCcEEE--EEecCCCCEEEEEEcCCCCEEEEEeCC------eEEEEECCCC
Q 044075 664 ETDRLTH--SFKGHSTEIHSVCWDTNGEYLASVSQD------SVRVWSLASG 707 (786)
Q Consensus 664 ~t~~~i~--~l~~h~~~I~sv~~spdg~~Lasgs~D------~I~vwDl~s~ 707 (786)
++.+-.. .+....... +++. -++++.++|+.+ .|.+||..+.
T Consensus 423 ~~~~W~~~~~m~~~r~~~-~~~v-~~~~IYviGG~~~~~~~~~ve~Yd~~~~ 472 (480)
T PHA02790 423 SSNTWTLIDDPIYPRDNP-ELII-VDNKLLLIGGFYRGSYIDTIEVYNNRTY 472 (480)
T ss_pred CCCcEeEcCCCCCCcccc-EEEE-ECCEEEEECCcCCCcccceEEEEECCCC
Confidence 7764322 221111112 2222 356666666642 3556665543
No 442
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=93.64 E-value=2.2 Score=50.48 Aligned_cols=108 Identities=13% Similarity=0.173 Sum_probs=71.7
Q ss_pred CCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEc-cCCCceEEEEEe--CCCCEEEEEECCCeEEEEECC-----
Q 044075 677 TEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELS-SSGNKFHSCIFH--PSYPTLMVIGGYQSLELWNMA----- 747 (786)
Q Consensus 677 ~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~-~~~~~I~sv~fs--pdg~~L~sgs~dg~I~IwDl~----- 747 (786)
..+.-+.-+.-++..++-+.. .+.|||.+.+....+-. ...+.|.++.|. |++..+++.|....|.+|.-.
T Consensus 30 ~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~ 109 (631)
T PF12234_consen 30 SNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYT 109 (631)
T ss_pred CCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhh
Confidence 344445445555554444444 89999999887544333 346789988875 688999999999999998432
Q ss_pred CC-------eEEEEcccC-CCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 748 EN-------KCMTIAAHD-CVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 748 ~~-------~~~~~~~h~-~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.. +.+.+..|+ .+|.+..|.++|.+++.++ +.+.|++
T Consensus 110 ~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~d 154 (631)
T PF12234_consen 110 NKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFD 154 (631)
T ss_pred cCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEEC
Confidence 11 112344554 6899999999997666553 3566654
No 443
>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
Probab=93.63 E-value=5.6 Score=45.65 Aligned_cols=265 Identities=11% Similarity=0.031 Sum_probs=132.0
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCC-CCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHN-HIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~-~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
..+|..+.+.-.|. |.+|+.|| +..||..+++.+....... .+|..+..+-.+ .|.+|+.+| |++.+.+.....-
T Consensus 164 d~~V~aLv~D~~g~-lWvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg-~LWVGTdqG-v~~~e~~G~~~sn 239 (671)
T COG3292 164 DTPVVALVFDANGR-LWVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQG-RLWVGTDQG-VYLQEAEGWRASN 239 (671)
T ss_pred CccceeeeeeccCc-EEEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcC-cEEEEeccc-eEEEchhhccccc
Confidence 45688888888875 56677777 7777888887776654443 567666666555 477777665 7777765522111
Q ss_pred eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee-eEeec-----CCeEEEEEeCCCCEEEEEECCCeEEEE
Q 044075 588 QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC-ARISK-----GGTVQVRFQPRLGLLLAAASENVVSIF 661 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~-~~~~~-----~~i~~i~~sp~g~~Ll~gs~dg~I~iw 661 (786)
....-....|..+.-...|... .|+.+|..+. ....... ....+ ..+..+....+ ..+.+++.++.+++-
T Consensus 240 ~~~~lp~~~I~ll~qD~qG~lW--iGTenGl~r~-~l~rq~Lq~~~~~~~l~~S~vnsL~~D~d-GsLWv~t~~giv~~~ 315 (671)
T COG3292 240 WGPMLPSGNILLLVQDAQGELW--IGTENGLWRT-RLPRQGLQIPLSKMHLGVSTVNSLWLDTD-GSLWVGTYGGIVRYL 315 (671)
T ss_pred cCCCCcchheeeeecccCCCEE--EeecccceeE-ecCCCCccccccccCCccccccceeeccC-CCEeeeccCceEEEe
Confidence 1111123345444444444322 3444443322 2222111 11111 12233333333 446677777766665
Q ss_pred EcCCCcEEEEEecC-CCCEEEEEEcC---CCCEEEEEeCCeEEEEECCCCeeEEEEcc-CCCceEEEEEeCCCCEEEEEE
Q 044075 662 DVETDRLTHSFKGH-STEIHSVCWDT---NGEYLASVSQDSVRVWSLASGECIHELSS-SGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 662 D~~t~~~i~~l~~h-~~~I~sv~~sp---dg~~Lasgs~D~I~vwDl~s~~~i~~l~~-~~~~I~sv~fspdg~~L~sgs 736 (786)
+.+- .....+... ...+-.++..| +......-+...+.+-+-.++..+..... ....|+.+++...+ .+..++
T Consensus 316 ~a~w-~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~q~Rg~nit~~~~d~~g-~lWlgs 393 (671)
T COG3292 316 TADW-KRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVHQLRGMNITTTLEDSRG-RLWLGS 393 (671)
T ss_pred cchh-hheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEeeeccccccchhhhccCC-cEEEEe
Confidence 4431 111111111 11111111111 11111111111233334444544443322 23456666676644 466677
Q ss_pred CCCeEEEEECCC-CeEEEEc--ccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 737 GYQSLELWNMAE-NKCMTIA--AHDCVISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 737 ~dg~I~IwDl~~-~~~~~~~--~h~~~V~slafspdg~~LaSgs~DG~I~I 784 (786)
..+.+..|+..+ +...... ...+.|..+.=.|+++ |..|+.+|.++.
T Consensus 394 ~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dns-LWIGTs~Glvk~ 443 (671)
T COG3292 394 MQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNS-LWIGTSGGLVKR 443 (671)
T ss_pred cccchhhhccCCcccccccccCCcccceeeeeecCCCC-EEEeccCCeEec
Confidence 665666777666 3333222 2356788888889888 777888887764
No 444
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.28 E-value=0.71 Score=56.34 Aligned_cols=140 Identities=12% Similarity=0.013 Sum_probs=85.2
Q ss_pred eEEEEEeCCCCEEEEEEC--CCeEEEEEcCCCcEEE-----EEec------CCCCEEEEEEcCCCC-EEEEEeCC-eEEE
Q 044075 637 TVQVRFQPRLGLLLAAAS--ENVVSIFDVETDRLTH-----SFKG------HSTEIHSVCWDTNGE-YLASVSQD-SVRV 701 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~--dg~I~iwD~~t~~~i~-----~l~~------h~~~I~sv~~spdg~-~Lasgs~D-~I~v 701 (786)
+..+...+|+...++... +-.|+.||+++..... -+.. ...-..++.|.|.-. ..+++..| .|+|
T Consensus 103 i~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V 182 (1405)
T KOG3630|consen 103 IVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRV 182 (1405)
T ss_pred ceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhh
Confidence 344444555554444433 3478899987642211 1111 223345778887533 34555566 7887
Q ss_pred EECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEc----ccCCCeEEEEEcCCCCEEEEE
Q 044075 702 WSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIA----AHDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 702 wDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~----~h~~~V~slafspdg~~LaSg 776 (786)
..+........--......++++|+|.|+.+++|-..|++.-|...-.....+. .....|.+|+|.....+|++-
T Consensus 183 ~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflvvy 261 (1405)
T KOG3630|consen 183 KSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLVVY 261 (1405)
T ss_pred hhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEEEEe
Confidence 766543222121234567899999999999999999999988876544332221 125789999999777766653
No 445
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=93.12 E-value=24 Score=42.04 Aligned_cols=119 Identities=17% Similarity=0.257 Sum_probs=67.4
Q ss_pred ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEE--EEEec-CCCCEEEEEEcC------CCCEEEEEeC---C--e
Q 044075 633 SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLT--HSFKG-HSTEIHSVCWDT------NGEYLASVSQ---D--S 698 (786)
Q Consensus 633 ~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i--~~l~~-h~~~I~sv~~sp------dg~~Lasgs~---D--~ 698 (786)
.+..+..+.|..++..+++...+|.|.+||...+... ..+.. +...+.--+|-+ ...++++.+. + .
T Consensus 128 l~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~~~~k~~ 207 (670)
T PF10395_consen 128 LDDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQLSNSKLS 207 (670)
T ss_pred cccceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEcCCCcEE
Confidence 4578889999999999999999999999999333211 12221 222121112222 2334444333 2 6
Q ss_pred EEEEECC-CCeeEEEEc---cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 699 VRVWSLA-SGECIHELS---SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 699 I~vwDl~-s~~~i~~l~---~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
.+++.+. ....+.++. .+......+.|.-....|+.- .++.|.+|++...+..
T Consensus 208 ykL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~~G~LY~l-~~~~i~~ysip~f~~~ 264 (670)
T PF10395_consen 208 YKLISLSNESSSIFELSSTILENFGLEDSKFCYQFGKLYQL-SKKTISSYSIPNFQIQ 264 (670)
T ss_pred EEEEEeccCCcceEEeehheeccCCcccceEEEeCCEEEEE-eCCEEEEEEcCCceEE
Confidence 8888882 223333332 222333344444333334443 6779999999877654
No 446
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=93.12 E-value=14 Score=40.22 Aligned_cols=102 Identities=15% Similarity=0.144 Sum_probs=49.8
Q ss_pred CCeEEEEEcCC-----CcEEEEeCCCCeee---Eeec---CCeE-EEEEeCCCCEEEEEEC-----CCeEEEEEcCCCcE
Q 044075 606 KNDLFCSCDGN-----SEIRFWNLSQYSCA---RISK---GGTV-QVRFQPRLGLLLAAAS-----ENVVSIFDVETDRL 668 (786)
Q Consensus 606 g~~ll~sgs~D-----g~I~iwDl~~~~~~---~~~~---~~i~-~i~~sp~g~~Ll~gs~-----dg~I~iwD~~t~~~ 668 (786)
++.+++.|+.+ ..+..||+.+.... .... .... ..+..-++..++.|+. ...+..||+.+.+-
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~~~~iYv~GG~~~~~~~~~v~~yd~~~~~W 151 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYKDGTLYVGGGNRNGKPSNKSYLFNLETQEW 151 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEECCEEEEEeCcCCCccCceEEEEcCCCCCe
Confidence 35566666644 35667777665431 1111 1111 1112224455555553 24688899887643
Q ss_pred EE--EEecCCCCEEEEEEcCCCCEEEEEeCC-----eEEEEECCCCe
Q 044075 669 TH--SFKGHSTEIHSVCWDTNGEYLASVSQD-----SVRVWSLASGE 708 (786)
Q Consensus 669 i~--~l~~h~~~I~sv~~spdg~~Lasgs~D-----~I~vwDl~s~~ 708 (786)
.. .+.. .......+...++++++.|+.+ .+.+||..+.+
T Consensus 152 ~~~~~~p~-~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~ 197 (323)
T TIGR03548 152 FELPDFPG-EPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQ 197 (323)
T ss_pred eECCCCCC-CCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCe
Confidence 22 1211 1111222223456677777654 25688888754
No 447
>PHA02790 Kelch-like protein; Provisional
Probab=93.11 E-value=5.3 Score=46.33 Aligned_cols=181 Identities=8% Similarity=-0.009 Sum_probs=85.6
Q ss_pred CCEEEEEeCCC-----cEEEEcCCCCcceee-eecCCCCCeEEEEEecCCCeEEEEEcCC--CcEEEEeCCCCeeeEeec
Q 044075 563 STQLATSSFDK-----TVRIWDAAKPNFCLQ-TYTGHNNHVMSLDFHPKKNDLFCSCDGN--SEIRFWNLSQYSCARISK 634 (786)
Q Consensus 563 g~~Lasgs~Dg-----~I~VWdl~s~~~~~~-~~~~h~~~V~sl~~sp~g~~ll~sgs~D--g~I~iwDl~~~~~~~~~~ 634 (786)
+.++++|+.++ ++..||..+...... .+...... .+++.. ++.+++.|+.+ ..+..||..+..-.....
T Consensus 272 ~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~-~~~v~~--~~~iYviGG~~~~~sve~ydp~~n~W~~~~~ 348 (480)
T PHA02790 272 EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLY-ASGVPA--NNKLYVVGGLPNPTSVERWFHGDAAWVNMPS 348 (480)
T ss_pred CEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhc-ceEEEE--CCEEEEECCcCCCCceEEEECCCCeEEECCC
Confidence 44556666442 466778776543211 11111111 122222 45676677653 457788876554332211
Q ss_pred --CCe-EEEEEeCCCCEEEEEECC---CeEEEEEcCCCcEEEE--EecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCC
Q 044075 635 --GGT-VQVRFQPRLGLLLAAASE---NVVSIFDVETDRLTHS--FKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLAS 706 (786)
Q Consensus 635 --~~i-~~i~~sp~g~~Ll~gs~d---g~I~iwD~~t~~~i~~--l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s 706 (786)
... ......-++...++|+.+ ..+..||.++.+-... +...... .+++ .-++++.+.|+ .+.+||.++
T Consensus 349 l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~-~~~~-~~~~~IYv~GG--~~e~ydp~~ 424 (480)
T PHA02790 349 LLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYK-SCAL-VFGRRLFLVGR--NAEFYCESS 424 (480)
T ss_pred CCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCcccc-ceEE-EECCEEEEECC--ceEEecCCC
Confidence 111 112223355666666654 3477888876543221 1111111 1222 23566666654 356688776
Q ss_pred Ce--eEEEEccCCCceEEEEEeCCCCEEEEEECC-----CeEEEEECCCCeEE
Q 044075 707 GE--CIHELSSSGNKFHSCIFHPSYPTLMVIGGY-----QSLELWNMAENKCM 752 (786)
Q Consensus 707 ~~--~i~~l~~~~~~I~sv~fspdg~~L~sgs~d-----g~I~IwDl~~~~~~ 752 (786)
.+ .+..+........ ++ .-+++..++||.+ ..|.+||..+++..
T Consensus 425 ~~W~~~~~m~~~r~~~~-~~-v~~~~IYviGG~~~~~~~~~ve~Yd~~~~~W~ 475 (480)
T PHA02790 425 NTWTLIDDPIYPRDNPE-LI-IVDNKLLLIGGFYRGSYIDTIEVYNNRTYSWN 475 (480)
T ss_pred CcEeEcCCCCCCccccE-EE-EECCEEEEECCcCCCcccceEEEEECCCCeEE
Confidence 53 2222222122222 22 2255666666643 35778888776653
No 448
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=92.74 E-value=13 Score=40.60 Aligned_cols=108 Identities=7% Similarity=0.093 Sum_probs=53.1
Q ss_pred CCCEEEEEECC-----CeEEEEEcCCCee---eeecCCCCCCe--EEEEEccCCCEEEEEeC-----CCcEEEEcCCCCc
Q 044075 520 DGKLLASAGHD-----KKVVVWNMENFQT---ECTPDDHNHII--TDVRFRPNSTQLATSSF-----DKTVRIWDAAKPN 584 (786)
Q Consensus 520 dg~~Lasgs~D-----g~V~IWdl~t~~~---~~~l~~h~~~V--~sl~fspdg~~Lasgs~-----Dg~I~VWdl~s~~ 584 (786)
++.+++.|+.+ ..+..||+.+.+- ...+..-..+. .+++.. ++++.+.|+. ...+..||+.+.+
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~-~~~iYv~GG~~~~~~~~~v~~yd~~~~~ 150 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYK-DGTLYVGGGNRNGKPSNKSYLFNLETQE 150 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEE-CCEEEEEeCcCCCccCceEEEEcCCCCC
Confidence 45677777754 3566777765442 12221111111 122222 4666677764 2358888988766
Q ss_pred ceeee-ecCCCCCeEEEEEecCCCeEEEEEcCCC----cEEEEeCCCCeee
Q 044075 585 FCLQT-YTGHNNHVMSLDFHPKKNDLFCSCDGNS----EIRFWNLSQYSCA 630 (786)
Q Consensus 585 ~~~~~-~~~h~~~V~sl~~sp~g~~ll~sgs~Dg----~I~iwDl~~~~~~ 630 (786)
..... +......-.+++.. ++.+++.|+.++ .+.+||+.+.+-.
T Consensus 151 W~~~~~~p~~~r~~~~~~~~--~~~iYv~GG~~~~~~~~~~~yd~~~~~W~ 199 (323)
T TIGR03548 151 WFELPDFPGEPRVQPVCVKL--QNELYVFGGGSNIAYTDGYKYSPKKNQWQ 199 (323)
T ss_pred eeECCCCCCCCCCcceEEEE--CCEEEEEcCCCCccccceEEEecCCCeeE
Confidence 43221 22111111122222 355666776553 3568888875543
No 449
>PLN02193 nitrile-specifier protein
Probab=92.69 E-value=21 Score=41.25 Aligned_cols=188 Identities=5% Similarity=0.025 Sum_probs=91.4
Q ss_pred CCCEEEEEeCC-------CcEEEEcCCCCcceeeeecC-CCC--C-eEEEEEecCCCeEEEEEcCC-----CcEEEEeCC
Q 044075 562 NSTQLATSSFD-------KTVRIWDAAKPNFCLQTYTG-HNN--H-VMSLDFHPKKNDLFCSCDGN-----SEIRFWNLS 625 (786)
Q Consensus 562 dg~~Lasgs~D-------g~I~VWdl~s~~~~~~~~~~-h~~--~-V~sl~~sp~g~~ll~sgs~D-----g~I~iwDl~ 625 (786)
++.+++.|+.+ ..+.+||+.+.........+ ... . -.+++. .++.+++.|+.+ ..+.+||+.
T Consensus 175 ~~~iyv~GG~~~~~~~~~~~v~~yD~~~~~W~~~~~~g~~P~~~~~~~~~v~--~~~~lYvfGG~~~~~~~ndv~~yD~~ 252 (470)
T PLN02193 175 GNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVS--IGSTLYVFGGRDASRQYNGFYSFDTT 252 (470)
T ss_pred CCEEEEECCcCCCCCCeeCcEEEEECCCCEEEeCCCCCCCCCCcccceEEEE--ECCEEEEECCCCCCCCCccEEEEECC
Confidence 35566666643 24778888876543221111 001 1 111222 245676677654 358889988
Q ss_pred CCeeeEeecC-----Ce-EEEEEeCCCCEEEEEECC-----CeEEEEEcCCCcEEEEEe-----cCCCCEEEEEEcCCCC
Q 044075 626 QYSCARISKG-----GT-VQVRFQPRLGLLLAAASE-----NVVSIFDVETDRLTHSFK-----GHSTEIHSVCWDTNGE 689 (786)
Q Consensus 626 ~~~~~~~~~~-----~i-~~i~~sp~g~~Ll~gs~d-----g~I~iwD~~t~~~i~~l~-----~h~~~I~sv~~spdg~ 689 (786)
+.+-...... .. ...+..-++..++.|+.+ ..+..||+.+.+-...-. ...... .++. -+++
T Consensus 253 t~~W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~-~~~~-~~gk 330 (470)
T PLN02193 253 TNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGA-GLEV-VQGK 330 (470)
T ss_pred CCEEEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCc-EEEE-ECCc
Confidence 7654432211 11 111222344555666543 347788887754321110 011111 1222 2566
Q ss_pred EEEEEeC-----CeEEEEECCCCeeEEEEcc---CCC-ceEEEEEeCCCCEEEEEECC--------------CeEEEEEC
Q 044075 690 YLASVSQ-----DSVRVWSLASGECIHELSS---SGN-KFHSCIFHPSYPTLMVIGGY--------------QSLELWNM 746 (786)
Q Consensus 690 ~Lasgs~-----D~I~vwDl~s~~~i~~l~~---~~~-~I~sv~fspdg~~L~sgs~d--------------g~I~IwDl 746 (786)
+++.++. +.+.+||+.+.+-...-.. ... ...+++ .-+++.++.|+.. ..+.+||+
T Consensus 331 iyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~ 409 (470)
T PLN02193 331 VWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASA-AVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDT 409 (470)
T ss_pred EEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEE-EECCEEEEECCccCCccccccCccceeccEEEEEc
Confidence 6666553 2589999987653222111 111 112222 2245566666642 25889999
Q ss_pred CCCeEEEE
Q 044075 747 AENKCMTI 754 (786)
Q Consensus 747 ~~~~~~~~ 754 (786)
.+.....+
T Consensus 410 ~t~~W~~~ 417 (470)
T PLN02193 410 ETLQWERL 417 (470)
T ss_pred CcCEEEEc
Confidence 88876644
No 450
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=92.50 E-value=21 Score=39.86 Aligned_cols=65 Identities=6% Similarity=0.010 Sum_probs=31.2
Q ss_pred CCCEEEEEEC-CCeEEEEEcCCC----eeeeecCCCCCCeEEEEEccCCCEEEEEeCCC-----------cEEEEcCCCC
Q 044075 520 DGKLLASAGH-DKKVVVWNMENF----QTECTPDDHNHIITDVRFRPNSTQLATSSFDK-----------TVRIWDAAKP 583 (786)
Q Consensus 520 dg~~Lasgs~-Dg~V~IWdl~t~----~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg-----------~I~VWdl~s~ 583 (786)
++++.+.|+. +..+.++|++.. ..+..+......-.+++ .-++.+.+.|+.+. .+..||..+.
T Consensus 38 ~~~iyv~gG~~~~~~~~~d~~~~~~~W~~l~~~p~~~r~~~~~v-~~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n 116 (376)
T PRK14131 38 NNTVYVGLGSAGTSWYKLDLNAPSKGWTKIAAFPGGPREQAVAA-FIDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTN 116 (376)
T ss_pred CCEEEEEeCCCCCeEEEEECCCCCCCeEECCcCCCCCcccceEE-EECCEEEEEcCCCCCCCCCceeEcccEEEEeCCCC
Confidence 4455554443 445777787532 22222211111111122 22566777776542 4777888776
Q ss_pred cc
Q 044075 584 NF 585 (786)
Q Consensus 584 ~~ 585 (786)
..
T Consensus 117 ~W 118 (376)
T PRK14131 117 SW 118 (376)
T ss_pred EE
Confidence 53
No 451
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=92.46 E-value=0.18 Score=59.82 Aligned_cols=118 Identities=18% Similarity=0.318 Sum_probs=75.4
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEE-----------EccCCCEEEEEeCCCcEEEEcC
Q 044075 512 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVR-----------FRPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 512 V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~-----------fspdg~~Lasgs~Dg~I~VWdl 580 (786)
|.-|-|-++.-++..+-.++.|++.++++... ..+.+|...++.++ .+|||+.|+.++.||.++.|-+
T Consensus 186 V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 186 VSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI 264 (1283)
T ss_pred eeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence 33334444667788888889999888775433 44555776666554 5889999999999999998876
Q ss_pred CCCc----ceeeeecCCC-CCeEEEEEecCC---------CeEEEEEcCCCcEEEEeCCCCeee
Q 044075 581 AKPN----FCLQTYTGHN-NHVMSLDFHPKK---------NDLFCSCDGNSEIRFWNLSQYSCA 630 (786)
Q Consensus 581 ~s~~----~~~~~~~~h~-~~V~sl~~sp~g---------~~ll~sgs~Dg~I~iwDl~~~~~~ 630 (786)
.-.. .|....+.|+ .+-.|.-++... ..++-+.+.+..+++|.....+|.
T Consensus 265 yi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 265 YITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred eeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 4222 2444556666 333333343221 123434455678999988877776
No 452
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=92.17 E-value=14 Score=44.85 Aligned_cols=79 Identities=24% Similarity=0.339 Sum_probs=55.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC----------Cee--e-eec--------CCCCCCeEEEEEccC---C
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN----------FQT--E-CTP--------DDHNHIITDVRFRPN---S 563 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t----------~~~--~-~~l--------~~h~~~V~sl~fspd---g 563 (786)
-.-.|..|.++|+|++||..|..|.+.+ .+.. ++. . +++ ..+...|..+.|+|. +
T Consensus 83 ~~f~v~~i~~n~~g~~lal~G~~~v~V~-~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~ 161 (717)
T PF10168_consen 83 PLFEVHQISLNPTGSLLALVGPRGVVVL-ELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESD 161 (717)
T ss_pred CceeEEEEEECCCCCEEEEEcCCcEEEE-EeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCC
Confidence 3446999999999999999987765443 3321 111 1 111 234568999999995 5
Q ss_pred CEEEEEeCCCcEEEEcCCCCccee
Q 044075 564 TQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 564 ~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
..|++-..|+++|+||+.....+.
T Consensus 162 ~~l~vLtsdn~lR~y~~~~~~~p~ 185 (717)
T PF10168_consen 162 SHLVVLTSDNTLRLYDISDPQHPW 185 (717)
T ss_pred CeEEEEecCCEEEEEecCCCCCCe
Confidence 789999999999999997655433
No 453
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=91.80 E-value=0.46 Score=36.24 Aligned_cols=31 Identities=13% Similarity=0.193 Sum_probs=28.3
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 551 NHIITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 551 ~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
...|.+++|+|...+||.+..||.|.||.+.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4569999999999999999999999999983
No 454
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=91.72 E-value=0.018 Score=63.74 Aligned_cols=141 Identities=15% Similarity=0.286 Sum_probs=99.2
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEc
Q 044075 637 TVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELS 714 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~ 714 (786)
.....|.+.+..+++++.+..+..||-... .+.... .......++|+.++..++...+. .+.+||+.+...- .+.
T Consensus 37 pi~~~w~~e~~nlavaca~tiv~~YD~agq-~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytq-qLE 113 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACANTIVIYYDKAGQ-VILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQ-QLE 113 (615)
T ss_pred cceeeEecCCCceehhhhhhHHHhhhhhcc-eecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHH-HHh
Confidence 345567788878999999899999986533 222222 34556678999988877766554 8999999764211 111
Q ss_pred -cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcc-cCCCeEEEEEcCCCCEEEEEeCCCc
Q 044075 715 -SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAA-HDCVISALAQSPVTGMVASASHDKS 781 (786)
Q Consensus 715 -~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~-h~~~V~slafspdg~~LaSgs~DG~ 781 (786)
+....-.-+.|++.++.++.+...+.+.|++..+.......+ |...+++++|.+.+ +.+.++.|..
T Consensus 114 ~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd-~vil~dcd~~ 181 (615)
T KOG2247|consen 114 SGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLED-YVILCDCDNT 181 (615)
T ss_pred ccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccc-eeeecCcHHH
Confidence 111111226789999999999999999999998887776666 99999999999877 4555555543
No 455
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=91.63 E-value=20 Score=42.64 Aligned_cols=194 Identities=10% Similarity=0.082 Sum_probs=93.0
Q ss_pred CCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee--eeecCCCCCeEEEEEecCCC
Q 044075 530 DKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL--QTYTGHNNHVMSLDFHPKKN 607 (786)
Q Consensus 530 Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~--~~~~~h~~~V~sl~~sp~g~ 607 (786)
--.|+||++. |..+..+.-....+-.+.|+.+. .|++...||+++||++-...... ..+......|..+.|..+|
T Consensus 63 ~~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~G- 139 (829)
T KOG2280|consen 63 RPYIRIFNIS-GQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNG- 139 (829)
T ss_pred ceeEEEEecc-ccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCc-
Confidence 3468888865 44444443333378899999665 57777889999999986433111 1111222334444333333
Q ss_pred eEEEEEcCCCcEE-EEeCCCCeeeEee-----cCCeEEEEEeCCCC---EEEEEECCCeEEEEEcCCC-cEEEEEecCCC
Q 044075 608 DLFCSCDGNSEIR-FWNLSQYSCARIS-----KGGTVQVRFQPRLG---LLLAAASENVVSIFDVETD-RLTHSFKGHST 677 (786)
Q Consensus 608 ~ll~sgs~Dg~I~-iwDl~~~~~~~~~-----~~~i~~i~~sp~g~---~Ll~gs~dg~I~iwD~~t~-~~i~~l~~h~~ 677 (786)
+++-. .+|.+. +-+.......+.. .-...+....+++. .++-....-...++-.+.. .....+.....
T Consensus 140 -Vavlt-~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~~~~~~~ 217 (829)
T KOG2280|consen 140 -VAVLT-VSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHALSWPNS 217 (829)
T ss_pred -eEEEe-cCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccccccccCCCCc
Confidence 22222 233333 3333321111110 01112222222211 1111110000111111111 11222222345
Q ss_pred CEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCC-CceEEEEEeCC
Q 044075 678 EIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSG-NKFHSCIFHPS 728 (786)
Q Consensus 678 ~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~-~~I~sv~fspd 728 (786)
.+..+..||+.++|+--... .|.+-+.+..+++.++.... .+-..++|..+
T Consensus 218 ~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~Wcgn 270 (829)
T KOG2280|consen 218 SVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMAWCGN 270 (829)
T ss_pred eEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCchHhceeecC
Confidence 67788999999999888777 88888888777766665321 22224555443
No 456
>KOG1898 consensus Splicing factor 3b, subunit 3 [RNA processing and modification]
Probab=91.50 E-value=44 Score=41.40 Aligned_cols=99 Identities=13% Similarity=0.063 Sum_probs=61.6
Q ss_pred EEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccC--CCceEEEEEeCCCCEEEEEECCCeEE--EEECCCCeEEEEcc--
Q 044075 683 CWDTNGEYLASVSQDSVRVWSLASGECIHELSSS--GNKFHSCIFHPSYPTLMVIGGYQSLE--LWNMAENKCMTIAA-- 756 (786)
Q Consensus 683 ~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~--~~~I~sv~fspdg~~L~sgs~dg~I~--IwDl~~~~~~~~~~-- 756 (786)
++.|-..++.+|-.+.+++||+...+.++..... ...|+.+.+. +..+++|.....|. .|+-.+++.+.+..
T Consensus 940 Ai~~f~~~~LagvG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~--~~RI~VgD~qeSV~~~~y~~~~n~l~~fadD~ 1017 (1205)
T KOG1898|consen 940 AICPFQGRVLAGVGRFLRLYDLGKKKLLRKCELKFIPNRISSIQTY--GARIVVGDIQESVHFVRYRREDNQLIVFADDP 1017 (1205)
T ss_pred EEeccCCEEEEecccEEEEeeCChHHHHhhhhhccCceEEEEEeec--ceEEEEeeccceEEEEEEecCCCeEEEEeCCC
Confidence 4457777888888889999999887766554332 3445555553 55788887766554 46666666665543
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 757 HDCVISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 757 h~~~V~slafspdg~~LaSgs~DG~I~I 784 (786)
-...|+++.+- |...++.+..-|.+.+
T Consensus 1018 ~pR~Vt~~~~l-D~~tvagaDrfGNi~~ 1044 (1205)
T KOG1898|consen 1018 VPRHVTALELL-DYDTVAGADRFGNIAV 1044 (1205)
T ss_pred ccceeeEEEEe-cCCceeeccccCcEEE
Confidence 23346666554 3445666655565544
No 457
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=90.82 E-value=6.9 Score=36.79 Aligned_cols=110 Identities=14% Similarity=0.162 Sum_probs=68.6
Q ss_pred EEeCCCCEEEEEECCCeEEEEEcCCC--------cEEEEEecCCCCEEEEEEcC-----CCCEEEEEeCCeEEEEECCCC
Q 044075 641 RFQPRLGLLLAAASENVVSIFDVETD--------RLTHSFKGHSTEIHSVCWDT-----NGEYLASVSQDSVRVWSLASG 707 (786)
Q Consensus 641 ~~sp~g~~Ll~gs~dg~I~iwD~~t~--------~~i~~l~~h~~~I~sv~~sp-----dg~~Lasgs~D~I~vwDl~s~ 707 (786)
+|......|++++..+.|.|++.... ..+..+. ....|++|+-.+ +...|+.|+...|..||+...
T Consensus 5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N 83 (136)
T PF14781_consen 5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENN 83 (136)
T ss_pred EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccC
Confidence 34444455667777777777765532 2233333 456677775433 457889999889999999887
Q ss_pred eeEEEEccCCCceEEEEEe---CCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 708 ECIHELSSSGNKFHSCIFH---PSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 708 ~~i~~l~~~~~~I~sv~fs---pdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
..+..-.. ...|.++.+- ....-++..+.+..|.-||....+.+
T Consensus 84 ~d~Fyke~-~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~f 130 (136)
T PF14781_consen 84 SDLFYKEV-PDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIF 130 (136)
T ss_pred chhhhhhC-ccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEE
Confidence 65543333 3556666653 22334666666778888887766654
No 458
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=90.77 E-value=14 Score=42.00 Aligned_cols=31 Identities=19% Similarity=0.397 Sum_probs=22.9
Q ss_pred CceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 718 NKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 718 ~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
..|..++..+..+.+++.+.++.|.+|++..
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 3477888888888888888888999998874
No 459
>KOG1896 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit) [RNA processing and modification]
Probab=90.71 E-value=55 Score=41.17 Aligned_cols=136 Identities=12% Similarity=0.168 Sum_probs=79.9
Q ss_pred CEEEEEEC---------CCeEEEEEcCC-----Cc-----EEEEE--ecCCCCEEEEEEcCCCCEEEEEeCCeEEEEEC-
Q 044075 647 GLLLAAAS---------ENVVSIFDVET-----DR-----LTHSF--KGHSTEIHSVCWDTNGEYLASVSQDSVRVWSL- 704 (786)
Q Consensus 647 ~~Ll~gs~---------dg~I~iwD~~t-----~~-----~i~~l--~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl- 704 (786)
.++++|+. .|.++|||+-. ++ .++.+ +.-++.|..+| .-+|. |+++..-+|.||++
T Consensus 1047 ~ylavGT~~~~gEDv~~RGr~hi~diIeVVPepgkP~t~~KlKel~~eE~KGtVsavc-eV~G~-l~~~~GqKI~v~~l~ 1124 (1366)
T KOG1896|consen 1047 PYLAVGTAFIQGEDVPARGRIHIFDIIEVVPEPGKPFTKNKLKELYIEEQKGTVSAVC-EVRGH-LLSSQGQKIIVRKLD 1124 (1366)
T ss_pred ceEEEEEeecccccccCcccEEEEEEEEecCCCCCCcccceeeeeehhhcccceEEEE-EeccE-EEEccCcEEEEEEec
Confidence 46777764 37899999742 21 12221 12567777776 34554 55555558999999
Q ss_pred CCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe-EEEEcc---cCCCeEEEEEcCCCC--EEEEEeC
Q 044075 705 ASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK-CMTIAA---HDCVISALAQSPVTG--MVASASH 778 (786)
Q Consensus 705 ~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~-~~~~~~---h~~~V~slafspdg~--~LaSgs~ 778 (786)
+....+..- .-+-++......--.++|+.|.-...|.+.-..... .+.+.. ..-.++++.|--||. +++++..
T Consensus 1125 r~~~ligVa-FiD~~~yv~s~~~vknlIl~gDV~ksisfl~fqeep~rlsL~srd~~~l~v~s~EFLVdg~~L~flvsDa 1203 (1366)
T KOG1896|consen 1125 RDSELIGVA-FIDLPLYVHSMKVVKNLILAGDVMKSISFLGFQEEPYRLSLLSRDFEPLNVYSTEFLVDGSNLSFLVSDA 1203 (1366)
T ss_pred cCCcceeeE-EeccceeEEehhhhhhheehhhhhhceEEEEEccCceEEEEeecCCchhhceeeeeEEcCCeeEEEEEcC
Confidence 444433221 122233333333345577777777777766554432 222222 233588888888777 6788889
Q ss_pred CCcEEEe
Q 044075 779 DKSVKIW 785 (786)
Q Consensus 779 DG~I~IW 785 (786)
|+.|++|
T Consensus 1204 ~rNi~vy 1210 (1366)
T KOG1896|consen 1204 DRNIHVY 1210 (1366)
T ss_pred CCcEEEE
Confidence 9999987
No 460
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=90.60 E-value=7.1 Score=39.44 Aligned_cols=166 Identities=11% Similarity=0.041 Sum_probs=92.0
Q ss_pred CeEEEEEcC--CCcEEEEeCCCCeeeEeecCC---eEEEEEeCCCCEEEE-EECCCeEEEEEcCCCcEEEEEecCCCCEE
Q 044075 607 NDLFCSCDG--NSEIRFWNLSQYSCARISKGG---TVQVRFQPRLGLLLA-AASENVVSIFDVETDRLTHSFKGHSTEIH 680 (786)
Q Consensus 607 ~~ll~sgs~--Dg~I~iwDl~~~~~~~~~~~~---i~~i~~sp~g~~Ll~-gs~dg~I~iwD~~t~~~i~~l~~h~~~I~ 680 (786)
.+++.+.+. ...|++||+.+++.+...+-. +..=-...-+..+.. .-.++.-.+||.++.+++..+. ..+.=.
T Consensus 56 g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~-y~GeGW 134 (262)
T COG3823 56 GHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS-YEGEGW 134 (262)
T ss_pred CEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc-cCCcce
Confidence 356656653 457999999988776554422 111011122333333 3457889999999988877766 344445
Q ss_pred EEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc--CCCc---eEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEE-
Q 044075 681 SVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS--SGNK---FHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMT- 753 (786)
Q Consensus 681 sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~--~~~~---I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~- 753 (786)
.++ .|++.|+.+... ++..-|.++...+.++.. ...+ +..+.|. +|...+-.-.+..|...|..+++++.
T Consensus 135 gLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sGrV~~w 211 (262)
T COG3823 135 GLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSGRVVAW 211 (262)
T ss_pred eee--cCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCCcEEEE
Confidence 665 344445555444 788777776543333221 1122 2223332 33333333344455555666666542
Q ss_pred ------------EcccCCCeEEEEEcCCCCEEEEE
Q 044075 754 ------------IAAHDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 754 ------------~~~h~~~V~slafspdg~~LaSg 776 (786)
...|....+.+++.|+...|+..
T Consensus 212 idlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iT 246 (262)
T COG3823 212 IDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLIT 246 (262)
T ss_pred EEccCCchhcCccccccccccceeecCcCCeEEEe
Confidence 12356678899999988544443
No 461
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=90.35 E-value=0.29 Score=59.27 Aligned_cols=70 Identities=17% Similarity=0.073 Sum_probs=39.2
Q ss_pred cccCCchhhHHHHHHhhccCCccccccccccccCCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCccccccCCcc
Q 044075 183 QGNHGSVNAALQQIQARSQQTPDIKGEMNLGTSQRSMPMDPSSLYSQGIMQSKPGLGNAGLSPGVGGLPLKGWPLTGI 260 (786)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (786)
|.++-+.+..-++-+.-.-||.-|-+--|+...|..+++-.+.--+|-++ -|+. -|-+.+-|||||-|-.
T Consensus 1755 ~s~s~n~~~~e~~q~~~~sql~i~ss~p~~~ssp~~a~~iss~~v~qps~-----~~~~---~g~ss~~~~~~~p~s~ 1824 (2131)
T KOG4369|consen 1755 NSNSKNDSSNEWGQNEFISQLLINSSLPNATSSPQGASTISSAPVQQPST-----SSVT---TGLSSLELKGWMPASF 1824 (2131)
T ss_pred CCCCCchhhhhhhccchhhhheeeccCCCCCCCCCCCccccccccCCCcc-----cccc---ccccchhhcCCCCccc
Confidence 44455666444432333333434444556666666666655555555555 2222 4778999999997643
No 462
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=90.26 E-value=21 Score=36.36 Aligned_cols=102 Identities=18% Similarity=0.279 Sum_probs=63.6
Q ss_pred CEEEEEECCCeEEEEEcC--CCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC---C---cEEEE---cCC-CCcceee-
Q 044075 522 KLLASAGHDKKVVVWNME--NFQTECTPDDHNHIITDVRFRPNSTQLATSSFD---K---TVRIW---DAA-KPNFCLQ- 588 (786)
Q Consensus 522 ~~Lasgs~Dg~V~IWdl~--t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D---g---~I~VW---dl~-s~~~~~~- 588 (786)
+.|+.+...+.|.+|++. ......++..- +.|..+.++..|++|+|--.+ . .+|+| +.. .....+.
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v 107 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV 107 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence 455444667889999988 34455555443 789999999999999986442 2 56765 221 1111111
Q ss_pred eecC---------------------CCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC
Q 044075 589 TYTG---------------------HNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ 626 (786)
Q Consensus 589 ~~~~---------------------h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~ 626 (786)
.+.+ -...+.+++..|....+++++ ++.+.+|.+..
T Consensus 108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~--~~~l~lf~l~~ 164 (215)
T PF14761_consen 108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC--GNKLVLFTLKY 164 (215)
T ss_pred EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc--CCEEEEEEEEE
Confidence 1111 234567788777777777444 56888887654
No 463
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=90.26 E-value=0.049 Score=60.53 Aligned_cols=139 Identities=14% Similarity=0.199 Sum_probs=101.5
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee
Q 044075 554 ITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS 633 (786)
Q Consensus 554 V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~ 633 (786)
-....|.+.+.-++.++.+-.|..||-..... .-....+....++|..+++.+++.+-..+.+.+||+.+.......
T Consensus 37 pi~~~w~~e~~nlavaca~tiv~~YD~agq~~---le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE 113 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACANTIVIYYDKAGQVI---LELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLE 113 (615)
T ss_pred cceeeEecCCCceehhhhhhHHHhhhhhccee---cccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHh
Confidence 34556778777788888888899998654321 112234567788999888888888889999999999865433322
Q ss_pred cCCe---EEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEe
Q 044075 634 KGGT---VQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVS 695 (786)
Q Consensus 634 ~~~i---~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs 695 (786)
.+.. .-..|++....++.+...+.+.|++..+.+.+-..-.|...+++++|.+.+..+...+
T Consensus 114 ~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~dc 178 (615)
T KOG2247|consen 114 SGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILCDC 178 (615)
T ss_pred ccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeecCc
Confidence 2222 1256888888899998999999999988776666656899999999998876554443
No 464
>PLN02153 epithiospecifier protein
Probab=90.09 E-value=33 Score=37.62 Aligned_cols=144 Identities=13% Similarity=0.167 Sum_probs=68.9
Q ss_pred CCCEEEEEECC-------CeEEEEEcCCCeeeeec--CC-CCC---CeEEEEEccCCCEEEEEeCC-----CcEEEEcCC
Q 044075 520 DGKLLASAGHD-------KKVVVWNMENFQTECTP--DD-HNH---IITDVRFRPNSTQLATSSFD-----KTVRIWDAA 581 (786)
Q Consensus 520 dg~~Lasgs~D-------g~V~IWdl~t~~~~~~l--~~-h~~---~V~sl~fspdg~~Lasgs~D-----g~I~VWdl~ 581 (786)
++++++.|+.+ ..+.+||+.+.+-.... .. ... ....+.+ ++.+++.|+.+ ..+.+||+.
T Consensus 32 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 109 (341)
T PLN02153 32 GDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAV--GTKLYIFGGRDEKREFSDFYSYDTV 109 (341)
T ss_pred CCEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEE--CCEEEEECCCCCCCccCcEEEEECC
Confidence 35666667653 35788887764322211 10 010 1222222 46677777753 357888887
Q ss_pred CCcceee-eec----CCCCCeEEEEEecCCCeEEEEEcCC-----------CcEEEEeCCCCeeeEeecC------Ce-E
Q 044075 582 KPNFCLQ-TYT----GHNNHVMSLDFHPKKNDLFCSCDGN-----------SEIRFWNLSQYSCARISKG------GT-V 638 (786)
Q Consensus 582 s~~~~~~-~~~----~h~~~V~sl~~sp~g~~ll~sgs~D-----------g~I~iwDl~~~~~~~~~~~------~i-~ 638 (786)
+...... .+. .....-.+++.. ++.+++.|+.+ ..|.+||..+.+-...... .. .
T Consensus 110 t~~W~~~~~~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~ 187 (341)
T PLN02153 110 KNEWTFLTKLDEEGGPEARTFHSMASD--ENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGA 187 (341)
T ss_pred CCEEEEeccCCCCCCCCCceeeEEEEE--CCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcc
Confidence 7654221 110 011111222222 34566666643 2477888876554332110 00 1
Q ss_pred EEEEeCCCCEEEEEEC-------------CCeEEEEEcCCCcE
Q 044075 639 QVRFQPRLGLLLAAAS-------------ENVVSIFDVETDRL 668 (786)
Q Consensus 639 ~i~~sp~g~~Ll~gs~-------------dg~I~iwD~~t~~~ 668 (786)
.++ ..+++.+++++. ...|.+||..+.+-
T Consensus 188 ~~~-~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W 229 (341)
T PLN02153 188 GFA-VVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKW 229 (341)
T ss_pred eEE-EECCeEEEEeccccccccCCccceecCceEEEEcCCCcE
Confidence 122 234455554442 14688899887643
No 465
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=89.85 E-value=5 Score=45.36 Aligned_cols=141 Identities=13% Similarity=0.150 Sum_probs=88.7
Q ss_pred CCCeEEEEEcCCCcEEEEeCCCCeeeEeec-CCeEEEEEeCCC-------CEEEEEECCCeEEEEEcCCC-cEEEEE--e
Q 044075 605 KKNDLFCSCDGNSEIRFWNLSQYSCARISK-GGTVQVRFQPRL-------GLLLAAASENVVSIFDVETD-RLTHSF--K 673 (786)
Q Consensus 605 ~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-~~i~~i~~sp~g-------~~Ll~gs~dg~I~iwD~~t~-~~i~~l--~ 673 (786)
+...++..+.....++-.|++.++.+.... +.-.-+.|.|.. ..-++|-++..|.-.|.+-. ..+... +
T Consensus 478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddvvVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esK 557 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDVVVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESK 557 (776)
T ss_pred CcceEEecCCCcccceeeecccceeeeEeecCCcceeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeeh
Confidence 444555566667788888999998887665 222356677654 23566777777777776643 222211 1
Q ss_pred c--CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 674 G--HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 674 ~--h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
. ......|.. ....-|+++++.. -|++||--....-..+.+.+..|..+..+.+|+++++.+.. .|.+-|+.
T Consensus 558 dY~tKn~Fss~~-tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 558 DYKTKNKFSSGM-TTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDVP 632 (776)
T ss_pred hccccccccccc-cccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEecc
Confidence 1 112222222 2345588888888 99999965444444455567789999999999988776654 66666654
No 466
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=89.79 E-value=21 Score=42.38 Aligned_cols=162 Identities=14% Similarity=0.186 Sum_probs=88.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee--ecC-CCCCC-eEEEEEcc------CCCEEEEEeC-C---C
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC--TPD-DHNHI-ITDVRFRP------NSTQLATSSF-D---K 573 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~--~l~-~h~~~-V~sl~fsp------dg~~Lasgs~-D---g 573 (786)
-.+.|..+.|.++++.+++...+|.|.+||........ .+. .+... +.+ +|.+ ...++++.+. + -
T Consensus 128 l~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys-~fv~~~~~~~~~~~ll~v~~~~~~k~ 206 (670)
T PF10395_consen 128 LDDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYS-KFVNDFELENGKDLLLTVSQLSNSKL 206 (670)
T ss_pred cccceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehh-hhhcccccccCCceEEEEEEcCCCcE
Confidence 36789999999999999999999999999994322221 221 12211 111 2222 2334444443 2 2
Q ss_pred cEEEEcCCCCcceeeeec---CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC-------eEEEEEe
Q 044075 574 TVRIWDAAKPNFCLQTYT---GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG-------TVQVRFQ 643 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~~~~---~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~-------i~~i~~s 643 (786)
..+++.+......+..+. -+........|.-..+.++.- .+++|.+|++...+......-. ...+.+.
T Consensus 207 ~ykL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~~G~LY~l--~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~~vSl~ 284 (670)
T PF10395_consen 207 SYKLISLSNESSSIFELSSTILENFGLEDSKFCYQFGKLYQL--SKKTISSYSIPNFQIQKTISLPSIIDKESDDLVSLK 284 (670)
T ss_pred EEEEEEeccCCcceEEeehheeccCCcccceEEEeCCEEEEE--eCCEEEEEEcCCceEEEEEEechhhccccccceEee
Confidence 467777722221122221 122223333333334444433 5789999999887655543311 1223332
Q ss_pred -CCCCEEEEEECCCeEEEEEcCCCcEEEEEe
Q 044075 644 -PRLGLLLAAASENVVSIFDVETDRLTHSFK 673 (786)
Q Consensus 644 -p~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~ 673 (786)
|..++++. +.++.|++.|+.-...+..+.
T Consensus 285 ~~s~nRvLL-s~~nkIyLld~~~~siLse~~ 314 (670)
T PF10395_consen 285 PPSPNRVLL-SVNNKIYLLDLKFESILSEFE 314 (670)
T ss_pred cCCCCeEEE-EcCCEEEEEeehhhhhhhhhh
Confidence 33334443 445889999998766655554
No 467
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=89.51 E-value=30 Score=38.63 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=20.1
Q ss_pred EEEEECCCCeEEEEcccCC-CeEEEEEcCCCCEEEEEeCC
Q 044075 741 LELWNMAENKCMTIAAHDC-VISALAQSPVTGMVASASHD 779 (786)
Q Consensus 741 I~IwDl~~~~~~~~~~h~~-~V~slafspdg~~LaSgs~D 779 (786)
+.+||+.+++...+..-.. .-...+..-++++++.|+..
T Consensus 314 ~e~yd~~~~~W~~~~~lp~~r~~~~av~~~~~iyv~GG~~ 353 (376)
T PRK14131 314 DEIYALVNGKWQKVGELPQGLAYGVSVSWNNGVLLIGGET 353 (376)
T ss_pred hheEEecCCcccccCcCCCCccceEEEEeCCEEEEEcCCC
Confidence 5678888776543221111 11122333457788888754
No 468
>PLN02193 nitrile-specifier protein
Probab=89.22 E-value=48 Score=38.28 Aligned_cols=144 Identities=9% Similarity=-0.014 Sum_probs=71.6
Q ss_pred CCCEEEEEeCC-----CcEEEEcCCCCcceeeeec---CCCCCeEEEEEecCCCeEEEEEcCC-----CcEEEEeCCCCe
Q 044075 562 NSTQLATSSFD-----KTVRIWDAAKPNFCLQTYT---GHNNHVMSLDFHPKKNDLFCSCDGN-----SEIRFWNLSQYS 628 (786)
Q Consensus 562 dg~~Lasgs~D-----g~I~VWdl~s~~~~~~~~~---~h~~~V~sl~~sp~g~~ll~sgs~D-----g~I~iwDl~~~~ 628 (786)
++.+++.|+.+ ..+.+||+.+......... .....-.+++. .++.+++.|+.+ ..+..||+.+.+
T Consensus 228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~--~~~~iYv~GG~~~~~~~~~~~~yd~~t~~ 305 (470)
T PLN02193 228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAA--DEENVYVFGGVSATARLKTLDSYNIVDKK 305 (470)
T ss_pred CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEE--ECCEEEEECCCCCCCCcceEEEEECCCCE
Confidence 45666777754 3578888887654221111 01111122222 245566666644 346778887655
Q ss_pred eeEeec------CCeEEEEEeCCCCEEEEEECC----CeEEEEEcCCCcEEEEEec----CCCCEEEEEEcCCCCEEEEE
Q 044075 629 CARISK------GGTVQVRFQPRLGLLLAAASE----NVVSIFDVETDRLTHSFKG----HSTEIHSVCWDTNGEYLASV 694 (786)
Q Consensus 629 ~~~~~~------~~i~~i~~sp~g~~Ll~gs~d----g~I~iwD~~t~~~i~~l~~----h~~~I~sv~~spdg~~Lasg 694 (786)
-..... ..........+++.++.++.+ ..+.+||+.+.+-...-.. ......+++ .-++++++.|
T Consensus 306 W~~~~~~~~~~~~R~~~~~~~~~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~-~~~~~iyv~G 384 (470)
T PLN02193 306 WFHCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASA-AVGKHIVIFG 384 (470)
T ss_pred EEeCCCCCCCCCCCCCcEEEEECCcEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEE-EECCEEEEEC
Confidence 432211 000111112345666666654 4689999988754322110 111112222 2356666666
Q ss_pred eCC---------------eEEEEECCCCe
Q 044075 695 SQD---------------SVRVWSLASGE 708 (786)
Q Consensus 695 s~D---------------~I~vwDl~s~~ 708 (786)
+.. .+.+||+.+.+
T Consensus 385 G~~~~~~~~~~~~~~~~ndv~~~D~~t~~ 413 (470)
T PLN02193 385 GEIAMDPLAHVGPGQLTDGTFALDTETLQ 413 (470)
T ss_pred CccCCccccccCccceeccEEEEEcCcCE
Confidence 631 37788887664
No 469
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=89.17 E-value=39 Score=37.09 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=23.1
Q ss_pred eEEEEECCCCeEEEEcccCCC-eEEEEEcCCCCEEEEEeCCC
Q 044075 740 SLELWNMAENKCMTIAAHDCV-ISALAQSPVTGMVASASHDK 780 (786)
Q Consensus 740 ~I~IwDl~~~~~~~~~~h~~~-V~slafspdg~~LaSgs~DG 780 (786)
.+.+||..+.+...+...... -.+.+..-++++++.|+.+.
T Consensus 291 ~~e~yd~~~~~W~~~~~lp~~~~~~~~~~~~~~iyv~GG~~~ 332 (346)
T TIGR03547 291 SSEVYALDNGKWSKVGKLPQGLAYGVSVSWNNGVLLIGGENS 332 (346)
T ss_pred EeeEEEecCCcccccCCCCCCceeeEEEEcCCEEEEEeccCC
Confidence 467888887665433322221 12223345677888888663
No 470
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=89.06 E-value=16 Score=46.16 Aligned_cols=225 Identities=10% Similarity=0.063 Sum_probs=107.3
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCC-CeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceee
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNH-IITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQ 588 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~-~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~ 588 (786)
.....++|+|.-.++|.+..+|.|++|-..-.+.+.....-.. .+..+.|-.......+...+..+.+|.......+
T Consensus 36 ~~~~~~afD~~q~llai~t~tg~i~~yg~~~ve~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~-- 113 (993)
T KOG1983|consen 36 STPSALAFDPTQGLLAIGTRTGAIKIYGQPGVEFVGLHPKQNQINVTRIELLVGISRNLVLSDDDSLHLWSIKIKTGV-- 113 (993)
T ss_pred CCCcceeeccccceEEEEEecccEEEecccceEEEeccccccchhhhheeeeecccccceeecccceeeeccccccee--
Confidence 4567889999999999999999999997654333322221111 2222222222223333444556666665433211
Q ss_pred eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe----ecCCeEEE-EEeCCCCE--EEEEECCCeEEEE
Q 044075 589 TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI----SKGGTVQV-RFQPRLGL--LLAAASENVVSIF 661 (786)
Q Consensus 589 ~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~----~~~~i~~i-~~sp~g~~--Ll~gs~dg~I~iw 661 (786)
.+...+++.... ....++.+ ..+.+++||..-...... ........ ...+..-. ..+...+ -.++
T Consensus 114 ---~~~~~~~~~~~~--~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~~ 185 (993)
T KOG1983|consen 114 ---FLKQEITSFVTD--PPPDWLIG-ENGLVKVSDVLRHQLSDLKYAGTESSNFVPYESLSPTLSIEGLVIDLD--TVLI 185 (993)
T ss_pred ---ecCCcceeccCC--CCcchhcc-cCceeeEeeechhhhccceeccccccccceeeeeccceeeeccccccc--ccee
Confidence 112233333322 22222234 677888887653221111 00000000 00000000 0000000 0011
Q ss_pred EcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeE
Q 044075 662 DVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSL 741 (786)
Q Consensus 662 D~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I 741 (786)
-+.... ..+..+..++.+..+......++......+.+|+.........+..... ....++..++++-.||.+
T Consensus 186 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~~h~Dgs~ 258 (993)
T KOG1983|consen 186 SLPDAY--LGLSLIEYESLQVLYYSPTKILIGFNRGLVVIKDRASKYVQSAYLPNGQ-----LESRDGSHFVSYHTDGSY 258 (993)
T ss_pred eccccc--ccccccccccceeeeecCCCcceeeeeeeeeehhcccccchhhcccccc-----cCccCCceEEEEEecCCE
Confidence 110000 1222245556666555555555555555666666554333333322211 127788899999999999
Q ss_pred EEEECCCCeE
Q 044075 742 ELWNMAENKC 751 (786)
Q Consensus 742 ~IwDl~~~~~ 751 (786)
.+||...++.
T Consensus 259 ~fWd~s~g~~ 268 (993)
T KOG1983|consen 259 AFWDVSSGKL 268 (993)
T ss_pred EeeecCCCce
Confidence 9999988754
No 471
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=88.95 E-value=2.4 Score=43.63 Aligned_cols=61 Identities=13% Similarity=0.175 Sum_probs=47.7
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCeEEE--------Ec-------ccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 725 FHPSYPTLMVIGGYQSLELWNMAENKCMT--------IA-------AHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 725 fspdg~~L~sgs~dg~I~IwDl~~~~~~~--------~~-------~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+...+.+|++.+.+|.+++||+.+.+++. +. .....|..+.++.+|.-|++-+ +|....|+
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~ 93 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYS 93 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEec
Confidence 45578899999999999999999988751 11 3556789999998888777655 57788775
No 472
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=88.87 E-value=68 Score=39.57 Aligned_cols=155 Identities=14% Similarity=0.206 Sum_probs=92.3
Q ss_pred cCCCCeEEEEEc---C----CCCEEEEEECCCeEEEEEc------CC---------CeeeeecCC---CCCCeEEEEEcc
Q 044075 507 KSSSKVTCCHFS---S----DGKLLASAGHDKKVVVWNM------EN---------FQTECTPDD---HNHIITDVRFRP 561 (786)
Q Consensus 507 ~H~~~V~~lafS---p----dg~~Lasgs~Dg~V~IWdl------~t---------~~~~~~l~~---h~~~V~sl~fsp 561 (786)
.-..+|..|+|. . ..++|++= ....+.|+.. .. ..++..+.. -..+..+|+|+|
T Consensus 77 ~~~~PI~qI~fa~~~~~~~~~~~~l~Vr-t~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP 155 (765)
T PF10214_consen 77 DDGSPIKQIKFATLSESFDEKSRWLAVR-TETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNP 155 (765)
T ss_pred CCCCCeeEEEecccccccCCcCcEEEEE-cCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEecc
Confidence 356789999998 2 22455554 4566777761 11 122333321 234677899999
Q ss_pred -CCCEEEEEeCCCcEEEEcCCCCc----ceeeeecCCC----------CCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC
Q 044075 562 -NSTQLATSSFDKTVRIWDAAKPN----FCLQTYTGHN----------NHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ 626 (786)
Q Consensus 562 -dg~~Lasgs~Dg~I~VWdl~s~~----~~~~~~~~h~----------~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~ 626 (786)
+...||+....|...||++.... ........+. +.-..|.|.++.+.++ .|+ ...+.++|+++
T Consensus 156 ~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lL-v~~-r~~l~~~d~~~ 233 (765)
T PF10214_consen 156 WDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLL-VCN-RSKLMLIDFES 233 (765)
T ss_pred CccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEE-EEc-CCceEEEECCC
Confidence 55689999999999999992111 1111111111 2234678887767666 444 56788999987
Q ss_pred CeeeE-eec----CCeEEEEEeCCC-CEEEEEECCCeEEEEEcCC
Q 044075 627 YSCAR-ISK----GGTVQVRFQPRL-GLLLAAASENVVSIFDVET 665 (786)
Q Consensus 627 ~~~~~-~~~----~~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t 665 (786)
..... ... ..+..+.-++.. .++++.+ ...|..+|+..
T Consensus 234 ~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLT-s~eiiw~~~~~ 277 (765)
T PF10214_consen 234 NWQTEYLVTAKTWSWILDVKRSPDNPSHVFILT-SKEIIWLDVKS 277 (765)
T ss_pred CCccchhccCCChhheeeEEecCCccceEEEEe-cCeEEEEEccC
Confidence 65533 211 456667766663 2333333 36788888876
No 473
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=88.64 E-value=42 Score=36.81 Aligned_cols=64 Identities=9% Similarity=0.102 Sum_probs=31.6
Q ss_pred CCCEEEEEEC-CCeEEEEEcCC----CeeeeecCC-CCCCeEEEEEccCCCEEEEEeCC-----------CcEEEEcCCC
Q 044075 520 DGKLLASAGH-DKKVVVWNMEN----FQTECTPDD-HNHIITDVRFRPNSTQLATSSFD-----------KTVRIWDAAK 582 (786)
Q Consensus 520 dg~~Lasgs~-Dg~V~IWdl~t----~~~~~~l~~-h~~~V~sl~fspdg~~Lasgs~D-----------g~I~VWdl~s 582 (786)
++++.++|+. ...+.++|++. ...+..+.. ..... +++ .-++.+.+.|+.+ ..+..||..+
T Consensus 17 ~~~vyv~GG~~~~~~~~~d~~~~~~~W~~l~~~p~~~R~~~-~~~-~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~ 94 (346)
T TIGR03547 17 GDKVYVGLGSAGTSWYKLDLKKPSKGWQKIADFPGGPRNQA-VAA-AIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKK 94 (346)
T ss_pred CCEEEEEccccCCeeEEEECCCCCCCceECCCCCCCCcccc-eEE-EECCEEEEEeCCCCCCCCCcceecccEEEEECCC
Confidence 3555555554 24566777632 222222221 11111 222 2256777777753 2477788877
Q ss_pred Ccc
Q 044075 583 PNF 585 (786)
Q Consensus 583 ~~~ 585 (786)
...
T Consensus 95 ~~W 97 (346)
T TIGR03547 95 NSW 97 (346)
T ss_pred CEE
Confidence 664
No 474
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=88.55 E-value=55 Score=38.10 Aligned_cols=221 Identities=14% Similarity=0.132 Sum_probs=109.4
Q ss_pred ccCCCEEEEEeCCCcEEEEcCCCCcc-eeeeecCC-CCCeEEEEEecCCCeEEEEEc--CCCcEEEEeCCCCeeeEeec-
Q 044075 560 RPNSTQLATSSFDKTVRIWDAAKPNF-CLQTYTGH-NNHVMSLDFHPKKNDLFCSCD--GNSEIRFWNLSQYSCARISK- 634 (786)
Q Consensus 560 spdg~~Lasgs~Dg~I~VWdl~s~~~-~~~~~~~h-~~~V~sl~~sp~g~~ll~sgs--~Dg~I~iwDl~~~~~~~~~~- 634 (786)
..++..++.+..+|.+....+..... ......+. .....++++..++..+++.|+ .|+.+..|.....+.+..+.
T Consensus 219 ~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~N 298 (504)
T PF10433_consen 219 DKDGDRILLQDEDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLPN 298 (504)
T ss_dssp STTSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE--
T ss_pred cCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEeccC
Confidence 34677899999999999888766442 12222222 456677888766633444554 45666667755555555444
Q ss_pred -CCeEEEEEeCC----CC------EEEEEEC---CCeEEEEEcCCCcE--EEEEecC--CCCEEEEEEcC-CCCEEEEEe
Q 044075 635 -GGTVQVRFQPR----LG------LLLAAAS---ENVVSIFDVETDRL--THSFKGH--STEIHSVCWDT-NGEYLASVS 695 (786)
Q Consensus 635 -~~i~~i~~sp~----g~------~Ll~gs~---dg~I~iwD~~t~~~--i~~l~~h--~~~I~sv~~sp-dg~~Lasgs 695 (786)
+++..+++... .. .+++++. +|.++++.-.-+-. ....... -..++.+.... ++.||+...
T Consensus 299 ~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~l~~v~~iW~l~~~~~~~~~lv~S~ 378 (504)
T PF10433_consen 299 WGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSELPGVTGIWTLKLSSSDHSYLVLSF 378 (504)
T ss_dssp --SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEEESTEEEEEEE-SSSSSBSEEEEEE
T ss_pred cCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccCCCCceEEEEeeecCCCceEEEEEc
Confidence 77888777422 12 5666653 57788774322111 1111112 22333343222 267888888
Q ss_pred CCeEEEEECC---CCeeEEEEcc-----CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEE--cccCCCeEEEE
Q 044075 696 QDSVRVWSLA---SGECIHELSS-----SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTI--AAHDCVISALA 765 (786)
Q Consensus 696 ~D~I~vwDl~---s~~~i~~l~~-----~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~--~~h~~~V~sla 765 (786)
.+.-+|+.+. ..+.+..+.. ....+.+..+. +..++=.+.. .|++.+....+.... ......|.+.+
T Consensus 379 ~~~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~--~~~ivQVt~~-~i~l~~~~~~~~~~~w~~~~~~~I~~a~ 455 (504)
T PF10433_consen 379 PNETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVG--DGRIVQVTPK-GIRLIDLEDGKLTQEWKPPAGSIIVAAS 455 (504)
T ss_dssp SSEEEEEEES----SSEEEEE---TS-SSS-EEEEEEET--TTEEEEEESS-EEEEEESSSTSEEEEEE-TTS---SEEE
T ss_pred CCceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcC--CCeEEEEecC-eEEEEECCCCeEEEEEeCCCCCeEEEEE
Confidence 7755555553 3444433211 11122222222 3444444444 588888877766533 23445566665
Q ss_pred EcCCCCEEEEEeCCCcEEEe
Q 044075 766 QSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 766 fspdg~~LaSgs~DG~I~IW 785 (786)
+. +.+++.+-.++.+.++
T Consensus 456 ~~--~~~v~v~~~~~~~~~~ 473 (504)
T PF10433_consen 456 IN--DPQVLVALSGGELVYF 473 (504)
T ss_dssp ES--SSEEEEEE-TTEEEEE
T ss_pred EC--CCEEEEEEeCCcEEEE
Confidence 55 4456666666666554
No 475
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=88.23 E-value=14 Score=34.77 Aligned_cols=112 Identities=16% Similarity=0.110 Sum_probs=67.6
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEEcCCCe--------eeeecCCCCCCeEEEEEcc-----CCCEEEEEeCCCcEEEEc
Q 044075 513 TCCHFSSDGKLLASAGHDKKVVVWNMENFQ--------TECTPDDHNHIITDVRFRP-----NSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 513 ~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~--------~~~~l~~h~~~V~sl~fsp-----dg~~Lasgs~Dg~I~VWd 579 (786)
..-.|......|++++..|+|.|++..... .+..+ .-...|++|+-.+ +...|+.|+ ..+|.+||
T Consensus 2 aiGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~L-Nin~~italaaG~l~~~~~~D~LliGt-~t~llaYD 79 (136)
T PF14781_consen 2 AIGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFL-NINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYD 79 (136)
T ss_pred eEEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEE-ECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEE
Confidence 344566666678889999999999876432 22222 3345677776443 234666666 46799999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecC---CCeEEEEEcCCCcEEEEeCCCCee
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPK---KNDLFCSCDGNSEIRFWNLSQYSC 629 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~---g~~ll~sgs~Dg~I~iwDl~~~~~ 629 (786)
+..... ..++.-...|.++.+-.- ...+++. +.+..|.-||.+..+.
T Consensus 80 V~~N~d--~Fyke~~DGvn~i~~g~~~~~~~~l~iv-GGncsi~Gfd~~G~e~ 129 (136)
T PF14781_consen 80 VENNSD--LFYKEVPDGVNAIVIGKLGDIPSPLVIV-GGNCSIQGFDYEGNEI 129 (136)
T ss_pred cccCch--hhhhhCccceeEEEEEecCCCCCcEEEE-CceEEEEEeCCCCcEE
Confidence 987653 333444567777776322 2234433 3366666666655443
No 476
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=88.09 E-value=5.1 Score=45.30 Aligned_cols=133 Identities=13% Similarity=0.154 Sum_probs=85.5
Q ss_pred CCCCEEEE-EECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCC--------EEEEEeCCeEEEEECCC-CeeEEEE
Q 044075 644 PRLGLLLA-AASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGE--------YLASVSQDSVRVWSLAS-GECIHEL 713 (786)
Q Consensus 644 p~g~~Ll~-gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~--------~Lasgs~D~I~vwDl~s-~~~i~~l 713 (786)
.+...++. +.....++-.|++.|+.+..+..|..- -|.|.|+.+ .|+..|...|.-.|.+- |..+...
T Consensus 477 ~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~ 554 (776)
T COG5167 477 NDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVV 554 (776)
T ss_pred CCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeee
Confidence 33344333 344577899999999999999877664 567777533 35544544666666653 3222222
Q ss_pred ccC----CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCC
Q 044075 714 SSS----GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHD 779 (786)
Q Consensus 714 ~~~----~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~D 779 (786)
... .....+. ......|+++++..|.|++||.-..... .+.+....|..+..+.+|++|++.|..
T Consensus 555 esKdY~tKn~Fss~-~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~ 624 (776)
T COG5167 555 ESKDYKTKNKFSSG-MTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN 624 (776)
T ss_pred eehhcccccccccc-ccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc
Confidence 111 1222222 2234568999999999999996554333 566778889999999999988776654
No 477
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.01 E-value=8.5 Score=43.06 Aligned_cols=100 Identities=13% Similarity=0.225 Sum_probs=68.3
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCee----EEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECC--
Q 044075 675 HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGEC----IHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA-- 747 (786)
Q Consensus 675 h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~----i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~-- 747 (786)
..++|.+|.|++|.+.|++--.+ +|.+++....+. ..+.+.....|...+|+.. .-++..+..| +.+|-..
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pe 142 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPE 142 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchh
Confidence 45689999999999999998888 899998743322 2233344556888999876 4466665554 5555443
Q ss_pred CCeEEEEcccCCCeEEEEEcCCCCEEEEE
Q 044075 748 ENKCMTIAAHDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 748 ~~~~~~~~~h~~~V~slafspdg~~LaSg 776 (786)
.........|...|.=..|+++...+.-+
T Consensus 143 krslRlVks~~~nvnWy~yc~et~v~LL~ 171 (657)
T KOG2377|consen 143 KRSLRLVKSHNLNVNWYMYCPETAVILLS 171 (657)
T ss_pred hhhhhhhhhcccCccEEEEccccceEeee
Confidence 33333556777888888888887754433
No 478
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=87.94 E-value=5.1 Score=47.93 Aligned_cols=113 Identities=14% Similarity=0.174 Sum_probs=76.1
Q ss_pred CeEEEEEcC--CCCEEEEEECCCeEEEEEcCC-------C----e---------eeeecCCCCCCeEEEEEc--cCCCEE
Q 044075 511 KVTCCHFSS--DGKLLASAGHDKKVVVWNMEN-------F----Q---------TECTPDDHNHIITDVRFR--PNSTQL 566 (786)
Q Consensus 511 ~V~~lafSp--dg~~Lasgs~Dg~V~IWdl~t-------~----~---------~~~~l~~h~~~V~sl~fs--pdg~~L 566 (786)
.|+-|.... +...|+.|.+||.|.+|.+++ . + +...+ .....+++++++ ...++|
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~-~v~~SaWGLdIh~~~~~rlI 180 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHL-RVGASAWGLDIHDYKKSRLI 180 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEe-ecCCceeEEEEEecCcceEE
Confidence 355555544 556899999999999997641 1 0 11111 233478999998 778889
Q ss_pred EEEeCCCcEEEEcCCC--CcceeeeecCCCCCeEEEEEecCC--C---eEEEEEcCCCcEEEEeC
Q 044075 567 ATSSFDKTVRIWDAAK--PNFCLQTYTGHNNHVMSLDFHPKK--N---DLFCSCDGNSEIRFWNL 624 (786)
Q Consensus 567 asgs~Dg~I~VWdl~s--~~~~~~~~~~h~~~V~sl~~sp~g--~---~ll~sgs~Dg~I~iwDl 624 (786)
|+++....|.||-... .+.....-..|...|-+|+|.++. . ..+++++-.|.+.+|++
T Consensus 181 AVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 181 AVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 9998888888885543 221111122366789999997754 1 36778889999999887
No 479
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=87.59 E-value=3.1 Score=42.82 Aligned_cols=67 Identities=18% Similarity=0.237 Sum_probs=48.3
Q ss_pred EEeCCCCEEEEEECCCeEEEEEcCCCcEEEEE-------e-------cCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCC
Q 044075 641 RFQPRLGLLLAAASENVVSIFDVETDRLTHSF-------K-------GHSTEIHSVCWDTNGEYLASVSQDSVRVWSLAS 706 (786)
Q Consensus 641 ~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l-------~-------~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s 706 (786)
.+..++.++++.+.+|.+++||+.+.+.+..- . .....|..+.++.+|.-|++-+.+..+.||..-
T Consensus 17 ~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~L 96 (219)
T PF07569_consen 17 FLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPDL 96 (219)
T ss_pred EEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEecccc
Confidence 35566778888888888888888887654332 1 244667888888888888887777778887664
Q ss_pred C
Q 044075 707 G 707 (786)
Q Consensus 707 ~ 707 (786)
+
T Consensus 97 ~ 97 (219)
T PF07569_consen 97 G 97 (219)
T ss_pred c
Confidence 4
No 480
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=87.13 E-value=13 Score=44.36 Aligned_cols=94 Identities=12% Similarity=0.211 Sum_probs=57.5
Q ss_pred EEEEEeCCCCEEEEEECCC-----eEEEEEcCC---CcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCee
Q 044075 638 VQVRFQPRLGLLLAAASEN-----VVSIFDVET---DRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGEC 709 (786)
Q Consensus 638 ~~i~~sp~g~~Ll~gs~dg-----~I~iwD~~t---~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~ 709 (786)
..+.|-|.|..+++...|| .|..|.... |+.-.. .+....+..++|+-....++.+..+.|.+|-..+..-
T Consensus 250 ~~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr-~~~dEk~~~~~wn~~s~vlav~~~n~~~lwttkNyhW 328 (1243)
T COG5290 250 HQLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLR-VGCDEKAFLENWNLLSTVLAVAEGNLLKLWTTKNYHW 328 (1243)
T ss_pred hccccccCCceeeeeccCCCCCcceEEEEccCCcccCCcccc-CCchhhhhhhhhhHHHHHHHHhhcceEEEEEccceEE
Confidence 3478999999999988664 244444321 111111 1133446678888777777777777999998876543
Q ss_pred EEEEccCCCceEEEEEeCCCCEE
Q 044075 710 IHELSSSGNKFHSCIFHPSYPTL 732 (786)
Q Consensus 710 i~~l~~~~~~I~sv~fspdg~~L 732 (786)
.......-..+.-+.|+|....-
T Consensus 329 YLK~e~~ip~~s~vkwhpe~~nT 351 (1243)
T COG5290 329 YLKVERQIPGISYVKWHPEEKNT 351 (1243)
T ss_pred EEEEeecCCCcceeeeccccCcE
Confidence 33333333456667888865433
No 481
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=87.08 E-value=26 Score=41.75 Aligned_cols=174 Identities=13% Similarity=0.212 Sum_probs=86.9
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeee-c--CCCCCCeEEEEEccCCCEEEEEeCCCcEEE-EcCCCCc
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECT-P--DDHNHIITDVRFRPNSTQLATSSFDKTVRI-WDAAKPN 584 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~-l--~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V-Wdl~s~~ 584 (786)
.+.+..+.|+.+..+ ++...+|+++||++........ . ......|..+.|..+|-.+++ .+|.|.+ -+.+...
T Consensus 83 ~~~lI~mgWs~~eeL-I~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GVavlt--~~g~v~~i~~~~~~~ 159 (829)
T KOG2280|consen 83 HGELIGMGWSDDEEL-ICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGVAVLT--VSGQVILINGVEEPK 159 (829)
T ss_pred CCCeeeecccCCceE-EEEeccceEEEeecchhhhcccccccccccCceeEEEEecCceEEEe--cCCcEEEEcCCCcch
Confidence 348889999987664 4556899999999864322221 1 222334555556556633333 3344443 3333321
Q ss_pred ceeeeecC---CCCCeEEEEEecCCC--eEEEEEc-CCCcEEEEeCC--CCeeeEe--ecCCeEEEEEeCCCCEEEEEEC
Q 044075 585 FCLQTYTG---HNNHVMSLDFHPKKN--DLFCSCD-GNSEIRFWNLS--QYSCARI--SKGGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 585 ~~~~~~~~---h~~~V~sl~~sp~g~--~ll~sgs-~Dg~I~iwDl~--~~~~~~~--~~~~i~~i~~sp~g~~Ll~gs~ 654 (786)
...+.. ....-.|-...+++. .++.-.. ..+ ..++-.. ....... ....+..+.++|+.++|+.-..
T Consensus 160 --~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~~laLyt~ 236 (829)
T KOG2280|consen 160 --LRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLHALSWPNSSVVKISVSPNRRFLALYTE 236 (829)
T ss_pred --hhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccccccccCCCCceEEEEEEcCCcceEEEEec
Confidence 222211 111112222122211 1111111 000 0111111 1111111 1256678899999999999999
Q ss_pred CCeEEEEEcCCCcEEEEEec-CCCCEEEEEEcCCC
Q 044075 655 ENVVSIFDVETDRLTHSFKG-HSTEIHSVCWDTNG 688 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l~~-h~~~I~sv~~spdg 688 (786)
.|.|.+.+.+..+....+.. ....-..++|..+.
T Consensus 237 ~G~i~~vs~D~~~~lce~~~~~~~~p~qm~Wcgnd 271 (829)
T KOG2280|consen 237 TGKIWVVSIDLSQILCEFNCTDHDPPKQMAWCGND 271 (829)
T ss_pred CCcEEEEecchhhhhhccCCCCCCchHhceeecCC
Confidence 99999999887776666552 11222356664433
No 482
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=87.03 E-value=38 Score=34.57 Aligned_cols=131 Identities=13% Similarity=0.076 Sum_probs=65.4
Q ss_pred CEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC--C---cEEEE-eCCCCeeeEeecCCe
Q 044075 564 TQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN--S---EIRFW-NLSQYSCARISKGGT 637 (786)
Q Consensus 564 ~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D--g---~I~iw-Dl~~~~~~~~~~~~i 637 (786)
..|+.+...+.|.+|++.............-+.|..+.++..|++++..=... . .+++| +++.. ......
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~---~~~~~~- 104 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQ---KEENSP- 104 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhh---cccCCc-
Confidence 44545466788999999844332332233447899999999999887432221 1 34443 22211 000001
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCC
Q 044075 638 VQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASG 707 (786)
Q Consensus 638 ~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~ 707 (786)
.++..- | +-+.++..... ...-.+-.+. -...+.+++..|-.--|++|+.+++.+|.+...
T Consensus 105 v~vRia--G-~~v~~~~~~~~-----~~qleiiElP-l~~~p~ciaCC~~tG~LlVg~~~~l~lf~l~~~ 165 (215)
T PF14761_consen 105 VRVRIA--G-HRVTPSFNESS-----KDQLEIIELP-LSEPPLCIACCPVTGNLLVGCGNKLVLFTLKYQ 165 (215)
T ss_pred EEEEEc--c-cccccCCCCcc-----ccceEEEEec-CCCCCCEEEecCCCCCEEEEcCCEEEEEEEEEE
Confidence 111100 0 00011110000 0001112222 355677888878555577788888888877644
No 483
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=86.58 E-value=2.5 Score=31.52 Aligned_cols=31 Identities=39% Similarity=0.733 Sum_probs=26.3
Q ss_pred CCeEEEEEcCC-C--CEEEEEECCCeEEEEEcCC
Q 044075 510 SKVTCCHFSSD-G--KLLASAGHDKKVVVWNMEN 540 (786)
Q Consensus 510 ~~V~~lafSpd-g--~~Lasgs~Dg~V~IWdl~t 540 (786)
+.|.||.|||+ + ++|+.+-.-|.|.|+|+.+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 46899999984 4 5888888889999999984
No 484
>PRK05560 DNA gyrase subunit A; Validated
Probab=86.29 E-value=97 Score=38.47 Aligned_cols=226 Identities=8% Similarity=0.015 Sum_probs=0.0
Q ss_pred cCCCEEEEEeCCCcEEEEcCCCCcceeeeecC-------CCCCeEEEEEecCCCeEEEEEcCCCcEEE--EeCCCCe---
Q 044075 561 PNSTQLATSSFDKTVRIWDAAKPNFCLQTYTG-------HNNHVMSLDFHPKKNDLFCSCDGNSEIRF--WNLSQYS--- 628 (786)
Q Consensus 561 pdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~-------h~~~V~sl~~sp~g~~ll~sgs~Dg~I~i--wDl~~~~--- 628 (786)
++...+++-+.+|.|+--++.+.......-.+ ....+..+........+++..+....+++ +++....
T Consensus 496 ~~E~v~vllS~~GyIKri~~~~~~~~~~~~~g~~~~klKe~D~l~~~~~~~t~d~LllfTs~Grv~~l~v~~iP~~~~~~ 575 (805)
T PRK05560 496 PEEDVVVTLTHGGYIKRTPLDEYRAQRRGGKGVSGAKTKEDDFVEHLFVASTHDTLLFFTNRGRVYRLKVYEIPEASRTA 575 (805)
T ss_pred CCCCEEEEEeCCCEEEEcchhhhhhhcccCCCccccccCCCCeeEEEEEecCCCeEEEEecCCeEEEEEhhhCcCCCcCC
Q ss_pred --------eeEeecCCeEEEEEeC---CCCEEEEEECCCeEEEEEcCC-------CcEEEEEecCCCCEEEEEEcCCCCE
Q 044075 629 --------CARISKGGTVQVRFQP---RLGLLLAAASENVVSIFDVET-------DRLTHSFKGHSTEIHSVCWDTNGEY 690 (786)
Q Consensus 629 --------~~~~~~~~i~~i~~sp---~g~~Ll~gs~dg~I~iwD~~t-------~~~i~~l~~h~~~I~sv~~spdg~~ 690 (786)
........+..+.... +...++..+.+|.++..++.. +.....+.....-+..+..+.+..+
T Consensus 576 ~G~~i~~ll~L~~~E~Iv~~i~~~~~~~e~~lvlvTk~GyiKRi~l~~~~~~~r~G~~~ikLke~D~lv~v~~~~~~d~l 655 (805)
T PRK05560 576 RGRPIVNLLPLEPGEKITAILPVREFDDDKYLFFATKNGTVKKTSLSEFSNIRSNGIIAINLDEGDELIGVRLTDGDDDI 655 (805)
T ss_pred CCeEHHHhcCCCCCceEEEEEeccCCCCCCEEEEEeCCCEEEEEEhHHhhhcccCCceeeccCCCCEEEEEEEeCCCCEE
Q ss_pred EEEEeCCeEEEEECCC---------CeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE---------
Q 044075 691 LASVSQDSVRVWSLAS---------GECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM--------- 752 (786)
Q Consensus 691 Lasgs~D~I~vwDl~s---------~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~--------- 752 (786)
++....+.+..+.+.. |..+..+...+.-+..+.+.++..+++..+..|.++...+..-...
T Consensus 656 ll~T~~Gr~~r~~~~eIp~~gr~~~Gv~~i~L~~~E~Vv~~~~v~~~~~~il~vTk~G~iKr~~l~e~~~~~R~~kG~~~ 735 (805)
T PRK05560 656 LLATKNGKAIRFPESDVRPMGRTARGVRGIKLREGDEVVSMDVVREDSQEILTVTENGYGKRTPVSEYRLQGRGGKGVIT 735 (805)
T ss_pred EEEECCCcEEEEEhhhcCccCcccCCcccccCCCCCEEEEEEEEcCCCcEEEEEEeCCeEEEEEHHHhhccCCCCCcEEe
Q ss_pred -EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 753 -TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 753 -~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.+....+.+..+........++..+.+|.+..++
T Consensus 736 lkl~~~~d~lv~v~~v~~~~~v~i~T~~G~~lrf~ 770 (805)
T PRK05560 736 IKITEKNGKLVGALPVDDDDEIMLITDSGKLIRTR 770 (805)
T ss_pred eeccCCCCeEEEEEEecCCCeEEEEecCCeEEEEE
No 485
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=86.18 E-value=16 Score=43.80 Aligned_cols=99 Identities=15% Similarity=0.121 Sum_probs=64.6
Q ss_pred CCCEEEEEeCC-eEEEEECCC-------C-------------eeEEEEccCCCceEEEEEe--CCCCEEEEEECCCeEEE
Q 044075 687 NGEYLASVSQD-SVRVWSLAS-------G-------------ECIHELSSSGNKFHSCIFH--PSYPTLMVIGGYQSLEL 743 (786)
Q Consensus 687 dg~~Lasgs~D-~I~vwDl~s-------~-------------~~i~~l~~~~~~I~sv~fs--pdg~~L~sgs~dg~I~I 743 (786)
+..+|+.|.+| .|.+|.+++ . ++...+. .....+.++++ ...++||+++....|.|
T Consensus 113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTV 191 (717)
T PF08728_consen 113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTV 191 (717)
T ss_pred CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEE
Confidence 45667777777 788886531 0 0111222 23567889998 77788888888887777
Q ss_pred EECCC--CeEE--EEcccCCCeEEEEEcCCC---C---EEEEEeCCCcEEEeC
Q 044075 744 WNMAE--NKCM--TIAAHDCVISALAQSPVT---G---MVASASHDKSVKIWK 786 (786)
Q Consensus 744 wDl~~--~~~~--~~~~h~~~V~slafspdg---~---~LaSgs~DG~I~IWd 786 (786)
|-... .+.. ....|...|-+|+|-++. . .|++++-.|.|.+|+
T Consensus 192 Faf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~ 244 (717)
T PF08728_consen 192 FAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFK 244 (717)
T ss_pred EEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEE
Confidence 75443 2222 122467789999998754 2 788899999988874
No 486
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=86.02 E-value=86 Score=37.65 Aligned_cols=144 Identities=12% Similarity=0.139 Sum_probs=76.3
Q ss_pred cCCCCCCeEEEEEccCCCEEEEEeCCCc--EEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEE-----cCCCc-
Q 044075 547 PDDHNHIITDVRFRPNSTQLATSSFDKT--VRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSC-----DGNSE- 618 (786)
Q Consensus 547 l~~h~~~V~sl~fspdg~~Lasgs~Dg~--I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sg-----s~Dg~- 618 (786)
...+...+..+.|+|++..++..+.++. ..+|-+.... ....+...|....|+|.+..++.-. ..++.
T Consensus 55 ~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~g----~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~ 130 (620)
T COG1506 55 LLTFGGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVGG----LITKTAFGVSDARWSPDGDRIAFLTAEGASKRDGGD 130 (620)
T ss_pred ccccCCcccccccCCCCCEEEEEeccCCCcceEEEEecCC----ceeeeecccccceeCCCCCeEEEEecccccccCCce
Confidence 4456677889999999999988874332 3444333221 2333445677778888877666410 11222
Q ss_pred ------EEEEeCCCC-e------------eeEe--ecCCeEEEEEeCCCCEEEEEECCCe-------EEEEEcCCCcEEE
Q 044075 619 ------IRFWNLSQY-S------------CARI--SKGGTVQVRFQPRLGLLLAAASENV-------VSIFDVETDRLTH 670 (786)
Q Consensus 619 ------I~iwDl~~~-~------------~~~~--~~~~i~~i~~sp~g~~Ll~gs~dg~-------I~iwD~~t~~~i~ 670 (786)
+.+|....+ . .... ....+....+++++..++....+.. ..++...++ .+.
T Consensus 131 ~~~~~~~~~~~~~~g~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 209 (620)
T COG1506 131 HLFVDRLPVWFDGRGGERSDLYVVDIESKLIKLGLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNG-ELE 209 (620)
T ss_pred eeeecccceeecCCCCcccceEEEccCcccccccCCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCC-ceE
Confidence 223322211 1 1111 1133444555665566555544332 233333233 333
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEEe
Q 044075 671 SFKGHSTEIHSVCWDTNGEYLASVS 695 (786)
Q Consensus 671 ~l~~h~~~I~sv~~spdg~~Lasgs 695 (786)
.+......+..+.|.++++.++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~gk~~~~~~ 234 (620)
T COG1506 210 SLTPGEGSISKLAFDADGKSIALLG 234 (620)
T ss_pred EEcCCCceeeeeeeCCCCCeeEEec
Confidence 4444556688899999998665544
No 487
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=84.81 E-value=9.9 Score=43.25 Aligned_cols=24 Identities=13% Similarity=0.145 Sum_probs=13.6
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEE
Q 044075 637 TVQVRFQPRLGLLLAAASENVVSI 660 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~dg~I~i 660 (786)
+..+..++.|..++..+.+|.+..
T Consensus 106 V~~vl~s~~GS~VaL~G~~Gi~vM 129 (741)
T KOG4460|consen 106 VYQVLLSPTGSHVALIGIKGLMVM 129 (741)
T ss_pred EEEEEecCCCceEEEecCCeeEEE
Confidence 344555666666666666655443
No 488
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=84.73 E-value=8.4 Score=43.00 Aligned_cols=149 Identities=11% Similarity=0.139 Sum_probs=88.6
Q ss_pred CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEE-EEEe-cCCC----CEE-EEEEcCCCCEEEEEeCC-eEEEE-ECC
Q 044075 635 GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLT-HSFK-GHST----EIH-SVCWDTNGEYLASVSQD-SVRVW-SLA 705 (786)
Q Consensus 635 ~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i-~~l~-~h~~----~I~-sv~~spdg~~Lasgs~D-~I~vw-Dl~ 705 (786)
..+..+-..|+++.+++-+. ..+.++++.+.... +++. ...+ .|+ .+..-..|.-+.+++.| .|.-| |++
T Consensus 221 ~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdvr 299 (733)
T COG4590 221 SDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDVR 299 (733)
T ss_pred cchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeeee
Confidence 44556778999998888766 78888888765321 1111 1111 111 11222345567777777 56555 665
Q ss_pred CC-----eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCC
Q 044075 706 SG-----ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDK 780 (786)
Q Consensus 706 s~-----~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG 780 (786)
.+ ..++.++-...++..+.-....+-+++-...|++.++.....+.+....--..+..+++||.+.+|++- +.|
T Consensus 300 ~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~~~~~Sp~~~~Ll~e-~~g 378 (733)
T COG4590 300 RDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQLVAMSPNQAYLLSE-DQG 378 (733)
T ss_pred cCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCcceeeeCcccchheee-cCC
Confidence 43 233333333344444444444556777788888888876666655444444467789999999988764 345
Q ss_pred cEEEe
Q 044075 781 SVKIW 785 (786)
Q Consensus 781 ~I~IW 785 (786)
.|+++
T Consensus 379 ki~~~ 383 (733)
T COG4590 379 KIRLA 383 (733)
T ss_pred ceEEE
Confidence 67665
No 489
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=84.60 E-value=67 Score=35.14 Aligned_cols=184 Identities=11% Similarity=0.172 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCeEEEEEcCCCc------EEEEeCCC--------------------CeeeEeecCCeEEEEEeCCCCE
Q 044075 595 NHVMSLDFHPKKNDLFCSCDGNSE------IRFWNLSQ--------------------YSCARISKGGTVQVRFQPRLGL 648 (786)
Q Consensus 595 ~~V~sl~~sp~g~~ll~sgs~Dg~------I~iwDl~~--------------------~~~~~~~~~~i~~i~~sp~g~~ 648 (786)
+.+..|.+.+++..++ +.+.+|. +..+++.. +............+++.+++.+
T Consensus 20 GGlSgl~~~~~~~~~~-avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~ 98 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFY-AVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF 98 (326)
T ss_pred CcEeeEEEeCCCCEEE-EEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Q ss_pred EEEEECC------CeEEEEEcCCCcEEEEE-------------ec--CCCCEEEEEEcCCCCEEEEEeCCe---------
Q 044075 649 LLAAASE------NVVSIFDVETDRLTHSF-------------KG--HSTEIHSVCWDTNGEYLASVSQDS--------- 698 (786)
Q Consensus 649 Ll~gs~d------g~I~iwD~~t~~~i~~l-------------~~--h~~~I~sv~~spdg~~Lasgs~D~--------- 698 (786)
+++.-.+ ..|+.++.. ++.+..+ .. .+..+-+++++|+|+.|+++.+..
T Consensus 99 ~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~ 177 (326)
T PF13449_consen 99 WISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRAN 177 (326)
T ss_pred EEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcccc
Q ss_pred ------EEEEECC-------CCeeEEEEcc-----CCCceEEEEEeCCCCEEEEEEC-----CCeEEEEECCCCeEEEEc
Q 044075 699 ------VRVWSLA-------SGECIHELSS-----SGNKFHSCIFHPSYPTLMVIGG-----YQSLELWNMAENKCMTIA 755 (786)
Q Consensus 699 ------I~vwDl~-------s~~~i~~l~~-----~~~~I~sv~fspdg~~L~sgs~-----dg~I~IwDl~~~~~~~~~ 755 (786)
++|+... ..+....+.. ....|..+.+.+++++|+.==. ...++||.+.-.......
T Consensus 178 ~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~l~~at~~~ 257 (326)
T PF13449_consen 178 PDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVDLSDATDVP 257 (326)
T ss_pred cccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEEcccccccc
Q ss_pred cc-------------------------CCCeEEEEEcC--CCCE-EEEEeCCC
Q 044075 756 AH-------------------------DCVISALAQSP--VTGM-VASASHDK 780 (786)
Q Consensus 756 ~h-------------------------~~~V~slafsp--dg~~-LaSgs~DG 780 (786)
.. ...+..|+|.| ++.. |+..++|.
T Consensus 258 ~~~~l~~~~~~~~~k~ll~d~~~~g~~~dn~EGma~~p~~~g~~~l~lvsDnN 310 (326)
T PF13449_consen 258 GIESLEGADIKPVKKELLFDLSPLGLPIDNFEGMAVGPRLDGRRTLYLVSDNN 310 (326)
T ss_pred cccccccccccccccccccccccccCccCceeeEEEeeccCCCEEEEEEECCC
No 490
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=84.47 E-value=11 Score=44.34 Aligned_cols=178 Identities=14% Similarity=0.162 Sum_probs=97.1
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
..++++.-+|.|..++.+..||.|++|+.......+... ...+-..+.|...| |+++..|..+.-|.-+. - ....
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~-~~~p~~nlv~tnhg--l~~~tsdrr~la~~~dg-v-vqqq 89 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICE-EAKPKENLVFTNHG--LVTATSDRRALAWKEDG-V-VQQQ 89 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhh-hcCCccceeeeccc--eEEEeccchhheeeccC-c-chhh
Confidence 457788888999999999999999999987544422221 12233456666444 67777788887885432 1 1111
Q ss_pred ec---CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC
Q 044075 590 YT---GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETD 666 (786)
Q Consensus 590 ~~---~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~ 666 (786)
+. .......++...|....++ |.--|.|.-+|..-...+ .+ .++-++--.-..|.+-|+.++
T Consensus 90 fdyndqsekefss~~cdptaqnvv--gtlcggv~q~dcclrr~i--~k-----------nkfe~tyv~pshvilkdlsn~ 154 (1636)
T KOG3616|consen 90 FDYNDQSEKEFSSILCDPTAQNVV--GTLCGGVEQFDCCLRRGI--LK-----------NKFELTYVAPSHVILKDLSND 154 (1636)
T ss_pred ccccchhhhhccceecCchhhhhh--hhhccceeeehHHHHhHH--Hh-----------ccceeEEeccceeeeecccCC
Confidence 11 1122344555556555443 222344444442110000 00 011111111245666677666
Q ss_pred cEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCC
Q 044075 667 RLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASG 707 (786)
Q Consensus 667 ~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~ 707 (786)
.....+....-.|..+.+-...+|++.-...+|.|=|+.+.
T Consensus 155 trt~l~s~~g~aidelkilgkdryli~~ts~siii~d~es~ 195 (1636)
T KOG3616|consen 155 TRTNLISHKGLAIDELKILGKDRYLIAHTSESIIIADLESN 195 (1636)
T ss_pred ceEeeeecCCcchhhhhhccccceEEeeccccEEEeecccc
Confidence 55554443344555666666677777666667888887764
No 491
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=84.34 E-value=6.9 Score=38.61 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=24.3
Q ss_pred CCeEEEEEecCC-----CeEEEEEcCCCcEEEEeCCC
Q 044075 595 NHVMSLDFHPKK-----NDLFCSCDGNSEIRFWNLSQ 626 (786)
Q Consensus 595 ~~V~sl~~sp~g-----~~ll~sgs~Dg~I~iwDl~~ 626 (786)
..|..++|+|.| ..+|++...++.|.+|....
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 378899999853 56777888888888887653
No 492
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=84.11 E-value=18 Score=37.94 Aligned_cols=140 Identities=16% Similarity=0.187 Sum_probs=79.9
Q ss_pred EEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeC-C--CcEEEEcCCC-Ccceeeee----cCCCCCeEEEEEec
Q 044075 533 VVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSF-D--KTVRIWDAAK-PNFCLQTY----TGHNNHVMSLDFHP 604 (786)
Q Consensus 533 V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~-D--g~I~VWdl~s-~~~~~~~~----~~h~~~V~sl~~sp 604 (786)
-.+||+.+.+...........+.+-.|.+||++|.+|+. | ..|++++... ...+.... -.....--+....|
T Consensus 48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~ 127 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLP 127 (243)
T ss_pred EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECC
Confidence 457888776554333333334445567889999999876 2 4588887654 11111100 11223334455667
Q ss_pred CCCeEEEEEcCCCcEEEEeCCCC--eeeE--eec--------CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEE
Q 044075 605 KKNDLFCSCDGNSEIRFWNLSQY--SCAR--ISK--------GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSF 672 (786)
Q Consensus 605 ~g~~ll~sgs~Dg~I~iwDl~~~--~~~~--~~~--------~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l 672 (786)
+|+.+++.|...-+..+|.-... .... ... .--..+...|+|+.|+.+..+. .|||..+.+.++.+
T Consensus 128 DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~d~~~n~v~~~l 205 (243)
T PF07250_consen 128 DGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIYDYKTNTVVRTL 205 (243)
T ss_pred CCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--EEEeCCCCeEEeeC
Confidence 88877776666556666665321 1111 111 1112456689999888887654 45688888777766
Q ss_pred ec
Q 044075 673 KG 674 (786)
Q Consensus 673 ~~ 674 (786)
..
T Consensus 206 P~ 207 (243)
T PF07250_consen 206 PD 207 (243)
T ss_pred CC
Confidence 54
No 493
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=84.08 E-value=10 Score=47.63 Aligned_cols=134 Identities=13% Similarity=0.218 Sum_probs=82.8
Q ss_pred EECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEc--------CCCCEE-EEEeCCeEEEEECCC----Cee-----EEEE
Q 044075 652 AASENVVSIFDVETDRLTHSFKGHSTEIHSVCWD--------TNGEYL-ASVSQDSVRVWSLAS----GEC-----IHEL 713 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~s--------pdg~~L-asgs~D~I~vwDl~s----~~~-----i~~l 713 (786)
.+.|+.+.+|+.+++.....+.+....|..|..- |.=+++ +.+..-.|.++-+.- +.. ..++
T Consensus 95 iTiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i 174 (1311)
T KOG1900|consen 95 ITIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKI 174 (1311)
T ss_pred EEeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceee
Confidence 3457889999999877777777766677766542 222333 334333555554322 110 1223
Q ss_pred ccCCCceEEEEEeCCCCEEEEEECCCeEEE--EECCCC----eE-----------------EEEc-ccCCCeEEEEEcCC
Q 044075 714 SSSGNKFHSCIFHPSYPTLMVIGGYQSLEL--WNMAEN----KC-----------------MTIA-AHDCVISALAQSPV 769 (786)
Q Consensus 714 ~~~~~~I~sv~fspdg~~L~sgs~dg~I~I--wDl~~~----~~-----------------~~~~-~h~~~V~slafspd 769 (786)
...+..|.++....+|+.+ .+|.||.|+= |...++ +| ..+. .+.++|..++....
T Consensus 175 ~~dg~~V~~I~~t~nGRIF-~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~S 253 (1311)
T KOG1900|consen 175 SVDGVSVNCITYTENGRIF-FAGRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNS 253 (1311)
T ss_pred ecCCceEEEEEeccCCcEE-EeecCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEeccc
Confidence 3335678888877777755 4555554432 222221 11 1233 56789999999998
Q ss_pred CCEEEEEeCCCcEEEeC
Q 044075 770 TGMVASASHDKSVKIWK 786 (786)
Q Consensus 770 g~~LaSgs~DG~I~IWd 786 (786)
.+++++-+..|+|.+||
T Consensus 254 R~IlY~lsek~~v~~Y~ 270 (1311)
T KOG1900|consen 254 RNILYVLSEKGTVSAYD 270 (1311)
T ss_pred cceeeeeccCceEEEEE
Confidence 89999999999999996
No 494
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=84.01 E-value=78 Score=35.42 Aligned_cols=178 Identities=16% Similarity=0.233 Sum_probs=101.6
Q ss_pred CeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEE----eCCCCE--EEEEEC-C---CeEEEEEcC--CCcEEEEEec
Q 044075 607 NDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRF----QPRLGL--LLAAAS-E---NVVSIFDVE--TDRLTHSFKG 674 (786)
Q Consensus 607 ~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~----sp~g~~--Ll~gs~-d---g~I~iwD~~--t~~~i~~l~~ 674 (786)
+.+++....++-+.+||+..........+....+.+ .-.++. |++++. + ..|++|.+. ++. +..+..
T Consensus 68 kSlIigTdK~~GL~VYdL~Gk~lq~~~~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~-L~~v~~ 146 (381)
T PF02333_consen 68 KSLIIGTDKKGGLYVYDLDGKELQSLPVGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGE-LTDVTD 146 (381)
T ss_dssp G-EEEEEETTTEEEEEETTS-EEEEE-SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTE-EEE-CB
T ss_pred cceEEEEeCCCCEEEEcCCCcEEEeecCCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCc-ceEcCC
Confidence 345667788899999999977665554455544432 223433 444443 2 468888775 333 333321
Q ss_pred -------CCCCEEEEEEc--C-CCC-EEEEEeCC-eEEEEECC---CC----eeEEEEccCCCceEEEEEeCCCCEEEEE
Q 044075 675 -------HSTEIHSVCWD--T-NGE-YLASVSQD-SVRVWSLA---SG----ECIHELSSSGNKFHSCIFHPSYPTLMVI 735 (786)
Q Consensus 675 -------h~~~I~sv~~s--p-dg~-~Lasgs~D-~I~vwDl~---s~----~~i~~l~~~~~~I~sv~fspdg~~L~sg 735 (786)
....+..+|+. + +|. |+++...+ .+..|.+. .+ +.+++|.. ...+..|+......+|+.+
T Consensus 147 ~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~-~sQ~EGCVVDDe~g~LYvg 225 (381)
T PF02333_consen 147 PAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKV-GSQPEGCVVDDETGRLYVG 225 (381)
T ss_dssp TTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE--SS-EEEEEEETTTTEEEEE
T ss_pred CCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecC-CCcceEEEEecccCCEEEe
Confidence 12346778874 3 455 44445555 66666553 33 46777765 4589999999999999999
Q ss_pred ECCCeEEEEECCCC-----eEEEEc---ccCCCeEEEEEc--CCCC-EEEEEe-CCCcEEEeC
Q 044075 736 GGYQSLELWNMAEN-----KCMTIA---AHDCVISALAQS--PVTG-MVASAS-HDKSVKIWK 786 (786)
Q Consensus 736 s~dg~I~IwDl~~~-----~~~~~~---~h~~~V~slafs--pdg~-~LaSgs-~DG~I~IWd 786 (786)
-.+--|.-|+.+.. ..+... .....|..|++- .++. ||+..+ .+++..|||
T Consensus 226 EE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~ 288 (381)
T PF02333_consen 226 EEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYD 288 (381)
T ss_dssp ETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEE
T ss_pred cCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEe
Confidence 99988888887632 222221 134567777764 3433 554444 566777774
No 495
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=83.89 E-value=18 Score=37.92 Aligned_cols=126 Identities=16% Similarity=0.227 Sum_probs=73.0
Q ss_pred EEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCC--CeeEE-EE---ccCCCceEEEEEeC
Q 044075 658 VSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLAS--GECIH-EL---SSSGNKFHSCIFHP 727 (786)
Q Consensus 658 I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s--~~~i~-~l---~~~~~~I~sv~fsp 727 (786)
-.+||+.+++.............+-.+.+||++|.+|+.. .+++++... ..+-. +. -......-+...-+
T Consensus 48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~ 127 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLP 127 (243)
T ss_pred EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECC
Confidence 4678988875533222222233334577899999998763 588888654 11111 11 12234455667778
Q ss_pred CCCEEEEEECCC-eEEEEECCC--CeEEEE--cc------cCCCeEEEEEcCCCCEEEEEeCCCcEE
Q 044075 728 SYPTLMVIGGYQ-SLELWNMAE--NKCMTI--AA------HDCVISALAQSPVTGMVASASHDKSVK 783 (786)
Q Consensus 728 dg~~L~sgs~dg-~I~IwDl~~--~~~~~~--~~------h~~~V~slafspdg~~LaSgs~DG~I~ 783 (786)
||+.|++|+... ...+|.-.. .....+ .. ....---+...|+|++++.+..+..|.
T Consensus 128 DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s~i~ 194 (243)
T PF07250_consen 128 DGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGSIIY 194 (243)
T ss_pred CCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCcEEE
Confidence 999999998875 456665432 112111 11 111122455679999999888765554
No 496
>KOG1898 consensus Splicing factor 3b, subunit 3 [RNA processing and modification]
Probab=83.56 E-value=85 Score=39.05 Aligned_cols=128 Identities=11% Similarity=0.088 Sum_probs=72.2
Q ss_pred CCcEEEEeCCC-CeeeEe-ec--CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec--CCCCEEEEEEcCCCC
Q 044075 616 NSEIRFWNLSQ-YSCARI-SK--GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG--HSTEIHSVCWDTNGE 689 (786)
Q Consensus 616 Dg~I~iwDl~~-~~~~~~-~~--~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~--h~~~I~sv~~spdg~ 689 (786)
+|.++.|++-. ++.+.. ++ -...-.++.|..+++++| ....+++||+-..++++..+. ....|+.+++. +.
T Consensus 911 ~g~~ytyk~~~~g~~lellh~T~~~~~v~Ai~~f~~~~Lag-vG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~--~~ 987 (1205)
T KOG1898|consen 911 SGFVYTYKFVRNGDKLELLHKTEIPGPVGAICPFQGRVLAG-VGRFLRLYDLGKKKLLRKCELKFIPNRISSIQTY--GA 987 (1205)
T ss_pred CCceEEEEEEecCceeeeeeccCCCccceEEeccCCEEEEe-cccEEEEeeCChHHHHhhhhhccCceEEEEEeec--ce
Confidence 56677776532 332222 22 222334566766655554 457899999988776664432 35567777763 45
Q ss_pred EEEEEeCC-e--EEEEECCCCeeEEEEccC-CCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 690 YLASVSQD-S--VRVWSLASGECIHELSSS-GNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 690 ~Lasgs~D-~--I~vwDl~s~~~i~~l~~~-~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
.+++|... . ...|+-...+.+...... ...|+++.+ -|...++.+..-|.+.+..+.
T Consensus 988 RI~VgD~qeSV~~~~y~~~~n~l~~fadD~~pR~Vt~~~~-lD~~tvagaDrfGNi~~vR~P 1048 (1205)
T KOG1898|consen 988 RIVVGDIQESVHFVRYRREDNQLIVFADDPVPRHVTALEL-LDYDTVAGADRFGNIAVVRIP 1048 (1205)
T ss_pred EEEEeeccceEEEEEEecCCCeEEEEeCCCccceeeEEEE-ecCCceeeccccCcEEEEECC
Confidence 56666544 4 445555444444333222 233444444 355568888888888877654
No 497
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=83.55 E-value=91 Score=35.84 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=39.2
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCee--eeecC-----CCCCCeEEEEEccCC
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQT--ECTPD-----DHNHIITDVRFRPNS 563 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~--~~~l~-----~h~~~V~sl~fspdg 563 (786)
..-...+.|+|.|||++|++--..|.|++++..+... +..+. .-......|+|+|+-
T Consensus 27 ~GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 27 SGLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 3455689999999998777764469999998654432 21111 125678899999874
No 498
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=83.17 E-value=5.8 Score=39.17 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=23.7
Q ss_pred CCeEEEEEcCCC------CEEEEEeCCCcEEEeC
Q 044075 759 CVISALAQSPVT------GMVASASHDKSVKIWK 786 (786)
Q Consensus 759 ~~V~slafspdg------~~LaSgs~DG~I~IWd 786 (786)
..|.+++|||-| .+|++.+.+|.|.||.
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~ 119 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYG 119 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEe
Confidence 379999999954 3899999999999983
No 499
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=82.32 E-value=93 Score=36.07 Aligned_cols=112 Identities=19% Similarity=0.184 Sum_probs=63.4
Q ss_pred EEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCC---EEEEEEcCCCCEEEEEe--------------CCeEEEE
Q 044075 640 VRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTE---IHSVCWDTNGEYLASVS--------------QDSVRVW 702 (786)
Q Consensus 640 i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~---I~sv~~spdg~~Lasgs--------------~D~I~vw 702 (786)
+...++|.+++... ..+..+|+. |+.+..+...... -..+...|+|++|+.+. .|.|..+
T Consensus 153 ~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivev 229 (477)
T PF05935_consen 153 FKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEV 229 (477)
T ss_dssp EEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE
T ss_pred eeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcccccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEE
Confidence 55567776665444 788888886 5555554422211 24567889999998877 3467778
Q ss_pred ECCCCeeEEEEcc--C----C---------------------CceEEEEEeCCCCEEEEEECCC-eEEEEECCCCeEEEE
Q 044075 703 SLASGECIHELSS--S----G---------------------NKFHSCIFHPSYPTLMVIGGYQ-SLELWNMAENKCMTI 754 (786)
Q Consensus 703 Dl~s~~~i~~l~~--~----~---------------------~~I~sv~fspdg~~L~sgs~dg-~I~IwDl~~~~~~~~ 754 (786)
| .+|+.+..+.. | . -.+.++.+.+....|++.+..- .|...|.+++++..+
T Consensus 230 d-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wi 308 (477)
T PF05935_consen 230 D-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWI 308 (477)
T ss_dssp --TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEE
T ss_pred C-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEE
Confidence 8 88887766431 1 0 1367899999666666666654 889999888887744
Q ss_pred c
Q 044075 755 A 755 (786)
Q Consensus 755 ~ 755 (786)
.
T Consensus 309 l 309 (477)
T PF05935_consen 309 L 309 (477)
T ss_dssp E
T ss_pred e
Confidence 4
No 500
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=82.18 E-value=55 Score=39.31 Aligned_cols=205 Identities=15% Similarity=0.094 Sum_probs=0.0
Q ss_pred CeEEEEEccCCCEEEEEeCC---------CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEE-cCCCcEEEE
Q 044075 553 IITDVRFRPNSTQLATSSFD---------KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSC-DGNSEIRFW 622 (786)
Q Consensus 553 ~V~sl~fspdg~~Lasgs~D---------g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sg-s~Dg~I~iw 622 (786)
.+....+.|.+..++..... ..+.+-|... .....+...+..+.|+|++..+++.. ..+....+|
T Consensus 14 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~ 88 (620)
T COG1506 14 RVSDPRVSPPGGRLAYILTGLDFLKPLYKSSLWVSDGKT-----VRLLTFGGGVSELRWSPDGSVLAFVSTDGGRVAQLY 88 (620)
T ss_pred cccCcccCCCCceeEEeeccccccccccccceEEEeccc-----ccccccCCcccccccCCCCCEEEEEeccCCCcceEE
Q ss_pred eCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEE
Q 044075 623 NLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRV 701 (786)
Q Consensus 623 Dl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~v 701 (786)
-+............+....|++.+..++....+.....-+. ..+...=..+-|...+ ... .+.+
T Consensus 89 l~~~~g~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g------~~~~~l~~ 153 (620)
T COG1506 89 LVDVGGLITKTAFGVSDARWSPDGDRIAFLTAEGASKRDGG---------DHLFVDRLPVWFDGRG------GERSDLYV 153 (620)
T ss_pred EEecCCceeeeecccccceeCCCCCeEEEEecccccccCCc---------eeeeecccceeecCCC------CcccceEE
Q ss_pred EECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCe-------EEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEE
Q 044075 702 WSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQS-------LELWNMAENKCMTIAAHDCVISALAQSPVTGMVA 774 (786)
Q Consensus 702 wDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~-------I~IwDl~~~~~~~~~~h~~~V~slafspdg~~La 774 (786)
.|..+ ...........+....+++++..++....+.. ..++...++...........+..+.|.++++.++
T Consensus 154 ~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~~~ 231 (620)
T COG1506 154 VDIES--KLIKLGLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGELESLTPGEGSISKLAFDADGKSIA 231 (620)
T ss_pred EccCc--ccccccCCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCCceEEEcCCCceeeeeeeCCCCCeeE
Q ss_pred EEeCC
Q 044075 775 SASHD 779 (786)
Q Consensus 775 Sgs~D 779 (786)
..+..
T Consensus 232 ~~~~~ 236 (620)
T COG1506 232 LLGTE 236 (620)
T ss_pred EeccC
Done!