Query 044075
Match_columns 786
No_of_seqs 1129 out of 2681
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 19:32:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044075.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044075hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 2.2E-42 7.6E-47 387.3 41.8 283 502-786 101-408 (410)
2 1got_B GT-beta; complex (GTP-b 100.0 1.5E-41 5.2E-46 370.3 47.0 288 497-786 43-340 (340)
3 3ow8_A WD repeat-containing pr 100.0 4.1E-41 1.4E-45 364.7 42.7 283 502-786 25-318 (321)
4 2pbi_B Guanine nucleotide-bind 100.0 3.7E-40 1.3E-44 362.0 45.4 290 496-786 51-354 (354)
5 3iz6_a 40S ribosomal protein R 100.0 3.9E-41 1.3E-45 373.0 34.0 289 498-786 55-372 (380)
6 2ynn_A Coatomer subunit beta'; 100.0 9.8E-40 3.3E-44 350.3 42.5 284 499-784 3-298 (304)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.9E-39 1E-43 353.1 40.5 288 498-786 4-332 (345)
8 3frx_A Guanine nucleotide-bind 100.0 1.2E-38 4.2E-43 344.3 44.0 285 498-786 6-314 (319)
9 4ery_A WD repeat-containing pr 100.0 2.6E-38 8.8E-43 338.8 45.1 287 498-786 12-309 (312)
10 1erj_A Transcriptional repress 100.0 1.9E-38 6.5E-43 353.0 43.2 278 506-786 61-386 (393)
11 2xzm_R RACK1; ribosome, transl 100.0 3.3E-38 1.1E-42 344.0 42.4 285 497-786 9-337 (343)
12 4g56_B MGC81050 protein; prote 100.0 9.5E-39 3.2E-43 351.3 34.7 280 505-786 38-340 (357)
13 2hes_X YDR267CP; beta-propelle 100.0 6.9E-38 2.3E-42 340.1 40.4 284 499-786 4-325 (330)
14 4gqb_B Methylosome protein 50; 100.0 1.8E-38 6E-43 348.0 36.1 277 507-786 28-328 (344)
15 1nr0_A Actin interacting prote 100.0 3.4E-38 1.2E-42 371.7 41.2 285 499-786 180-608 (611)
16 3zwl_B Eukaryotic translation 100.0 4.2E-37 1.4E-41 333.3 42.9 285 498-786 21-343 (369)
17 4aow_A Guanine nucleotide-bind 100.0 1.1E-36 3.7E-41 327.6 45.5 284 499-786 28-334 (340)
18 2ymu_A WD-40 repeat protein; u 100.0 2.4E-36 8.2E-41 350.5 48.0 280 500-786 294-577 (577)
19 1gxr_A ESG1, transducin-like e 100.0 5.4E-36 1.8E-40 320.9 45.5 279 504-786 46-334 (337)
20 1sq9_A Antiviral protein SKI8; 100.0 1E-36 3.4E-41 336.0 38.0 284 500-786 7-392 (397)
21 1nr0_A Actin interacting prote 100.0 4.6E-36 1.6E-40 353.5 43.4 282 501-786 51-394 (611)
22 3dm0_A Maltose-binding peripla 100.0 6.7E-36 2.3E-40 357.0 44.1 283 500-786 373-690 (694)
23 1k8k_C P40, ARP2/3 complex 41 100.0 3E-36 1E-40 328.4 36.0 280 505-786 4-358 (372)
24 2ymu_A WD-40 repeat protein; u 100.0 7.1E-35 2.4E-39 338.1 47.6 280 500-786 253-536 (577)
25 2pm9_A Protein WEB1, protein t 100.0 5.3E-37 1.8E-41 339.9 27.6 280 507-786 65-411 (416)
26 3odt_A Protein DOA1; ubiquitin 100.0 5E-35 1.7E-39 310.4 41.3 278 498-786 7-293 (313)
27 1r5m_A SIR4-interacting protei 100.0 1.6E-35 5.5E-40 327.3 38.9 275 507-786 106-422 (425)
28 1vyh_C Platelet-activating fac 100.0 1.2E-35 4.2E-40 332.6 37.5 265 467-747 122-410 (410)
29 3k26_A Polycomb protein EED; W 100.0 2.8E-36 9.4E-41 327.0 31.2 288 496-786 4-363 (366)
30 3ow8_A WD repeat-containing pr 100.0 6.2E-35 2.1E-39 316.1 40.6 268 466-747 49-320 (321)
31 3i2n_A WD repeat-containing pr 100.0 7.1E-36 2.4E-40 323.0 32.7 281 504-786 13-350 (357)
32 3ei3_B DNA damage-binding prot 100.0 2.5E-35 8.5E-40 324.6 36.0 281 498-786 62-379 (383)
33 1r5m_A SIR4-interacting protei 100.0 8E-35 2.7E-39 321.7 37.9 278 504-786 40-358 (425)
34 4gqb_B Methylosome protein 50; 100.0 9.1E-35 3.1E-39 318.5 36.2 242 507-751 80-334 (344)
35 3vl1_A 26S proteasome regulato 100.0 1.1E-34 3.7E-39 322.6 34.6 277 506-786 95-416 (420)
36 2ynn_A Coatomer subunit beta'; 100.0 4.1E-34 1.4E-38 306.5 37.9 268 467-748 27-302 (304)
37 3v7d_B Cell division control p 100.0 1.5E-33 5E-38 318.6 42.7 279 501-786 113-418 (464)
38 3gre_A Serine/threonine-protei 100.0 4.2E-35 1.4E-39 328.7 29.8 284 499-786 52-437 (437)
39 3dwl_C Actin-related protein 2 100.0 7.4E-36 2.5E-40 327.4 23.1 279 505-786 7-376 (377)
40 2pm9_A Protein WEB1, protein t 100.0 2E-35 7E-40 327.2 26.6 276 510-786 13-334 (416)
41 3frx_A Guanine nucleotide-bind 100.0 1.8E-33 6.1E-38 303.8 40.8 272 466-749 31-318 (319)
42 1gxr_A ESG1, transducin-like e 100.0 3.1E-34 1.1E-38 307.1 34.1 276 508-786 8-293 (337)
43 3dw8_B Serine/threonine-protei 100.0 4E-34 1.4E-38 320.3 33.1 275 508-785 27-442 (447)
44 1got_B GT-beta; complex (GTP-b 100.0 4.2E-33 1.4E-37 303.5 39.9 262 467-745 69-340 (340)
45 4e54_B DNA damage-binding prot 100.0 1.7E-34 6E-39 325.2 28.4 283 501-786 111-427 (435)
46 1yfq_A Cell cycle arrest prote 100.0 7.4E-34 2.5E-38 306.1 32.1 271 503-781 5-315 (342)
47 4aez_A CDC20, WD repeat-contai 100.0 3E-33 1E-37 311.3 37.5 277 503-786 85-377 (401)
48 3mmy_A MRNA export factor; mRN 100.0 1E-33 3.5E-38 306.6 32.7 285 498-785 28-342 (368)
49 4g56_B MGC81050 protein; prote 100.0 7.3E-34 2.5E-38 312.3 31.3 244 503-749 88-344 (357)
50 3mkq_A Coatomer beta'-subunit; 100.0 2.5E-33 8.4E-38 338.8 38.8 285 499-786 3-299 (814)
51 4gga_A P55CDC, cell division c 100.0 7.4E-33 2.5E-37 310.2 39.6 269 511-786 107-392 (420)
52 2pm7_B Protein transport prote 100.0 4.8E-33 1.7E-37 297.1 35.1 246 503-748 3-285 (297)
53 3f3f_A Nucleoporin SEH1; struc 100.0 1.8E-33 6.1E-38 300.7 31.3 282 504-786 6-334 (351)
54 4a11_B DNA excision repair pro 100.0 6.6E-33 2.3E-37 305.0 36.2 284 501-786 35-362 (408)
55 3vl1_A 26S proteasome regulato 100.0 8.1E-34 2.8E-38 315.5 28.9 272 511-786 58-362 (420)
56 1pgu_A Actin interacting prote 100.0 2.4E-32 8.3E-37 318.0 42.7 283 500-786 151-611 (615)
57 3sfz_A APAF-1, apoptotic pepti 100.0 1.1E-32 3.9E-37 349.2 42.0 284 502-786 608-910 (1249)
58 4ggc_A P55CDC, cell division c 100.0 4E-32 1.4E-36 289.1 39.3 268 512-786 28-312 (318)
59 2ovr_B FBW7, F-BOX/WD repeat p 100.0 7.9E-32 2.7E-36 303.5 43.9 292 467-786 131-439 (445)
60 4h5i_A Guanine nucleotide-exch 100.0 1.8E-32 6.1E-37 302.3 37.6 275 509-786 14-340 (365)
61 1p22_A F-BOX/WD-repeat protein 100.0 1.4E-32 4.7E-37 309.3 36.9 269 502-786 126-411 (435)
62 2j04_B YDR362CP, TAU91; beta p 100.0 4.1E-34 1.4E-38 330.6 24.8 282 502-786 200-514 (524)
63 2pbi_B Guanine nucleotide-bind 100.0 3.4E-32 1.1E-36 298.6 38.6 264 467-745 78-354 (354)
64 2hes_X YDR267CP; beta-propelle 100.0 2.7E-32 9.1E-37 296.1 36.9 277 457-748 17-328 (330)
65 2xzm_R RACK1; ribosome, transl 100.0 3.5E-32 1.2E-36 296.3 37.4 274 465-749 39-341 (343)
66 1erj_A Transcriptional repress 100.0 4.3E-32 1.5E-36 301.7 38.8 239 508-748 122-389 (393)
67 3v7d_B Cell division control p 100.0 2.1E-31 7.3E-36 300.9 45.1 296 467-785 134-459 (464)
68 4ery_A WD repeat-containing pr 100.0 6.6E-32 2.3E-36 288.9 38.6 265 467-747 37-311 (312)
69 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.4E-32 1.8E-36 295.5 38.0 247 505-752 57-339 (345)
70 1pgu_A Actin interacting prote 100.0 5.1E-32 1.7E-36 315.3 40.0 278 500-786 54-363 (615)
71 2pm7_B Protein transport prote 100.0 3.1E-32 1.1E-36 290.8 33.8 242 545-786 3-282 (297)
72 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.2E-31 7.5E-36 299.9 42.1 272 499-786 108-388 (445)
73 3sfz_A APAF-1, apoptotic pepti 100.0 3.5E-32 1.2E-36 344.7 39.1 304 467-786 629-1031(1249)
74 3mkq_A Coatomer beta'-subunit; 100.0 7.5E-32 2.6E-36 325.8 39.9 286 500-786 46-383 (814)
75 3bg1_A Protein SEC13 homolog; 100.0 7.8E-33 2.7E-37 298.4 27.5 244 504-747 8-292 (316)
76 2oaj_A Protein SNI1; WD40 repe 100.0 7.7E-32 2.6E-36 331.3 39.6 276 507-786 56-602 (902)
77 4aow_A Guanine nucleotide-bind 100.0 9.1E-31 3.1E-35 281.3 41.6 288 453-750 37-339 (340)
78 3iz6_a 40S ribosomal protein R 100.0 2.6E-32 8.8E-37 302.1 30.0 269 467-750 80-377 (380)
79 3dm0_A Maltose-binding peripla 100.0 3.3E-31 1.1E-35 316.4 40.9 273 466-748 396-693 (694)
80 3jrp_A Fusion protein of prote 100.0 1.2E-31 4.1E-36 291.9 33.1 248 501-786 3-284 (379)
81 1sq9_A Antiviral protein SKI8; 100.0 1.5E-31 5.1E-36 294.6 34.3 282 457-750 19-397 (397)
82 2oaj_A Protein SNI1; WD40 repe 100.0 1.6E-31 5.6E-36 328.4 35.2 281 504-786 146-658 (902)
83 2aq5_A Coronin-1A; WD40 repeat 100.0 9.7E-32 3.3E-36 298.7 29.6 275 510-786 35-339 (402)
84 3bg1_A Protein SEC13 homolog; 100.0 4.9E-32 1.7E-36 292.1 23.0 241 546-786 8-290 (316)
85 3k26_A Polycomb protein EED; W 100.0 1.1E-30 3.9E-35 282.8 31.6 236 508-747 68-365 (366)
86 3odt_A Protein DOA1; ubiquitin 100.0 5.2E-30 1.8E-34 271.7 35.7 264 467-752 31-300 (313)
87 4aez_A CDC20, WD repeat-contai 100.0 6.6E-30 2.3E-34 284.2 37.4 241 508-752 133-384 (401)
88 3bws_A Protein LP49; two-domai 100.0 1.1E-29 3.9E-34 283.5 38.9 284 499-786 113-429 (433)
89 3zwl_B Eukaryotic translation 100.0 2.3E-29 7.7E-34 272.5 39.9 267 467-750 46-348 (369)
90 3i2n_A WD repeat-containing pr 100.0 1.9E-30 6.5E-35 280.4 31.1 244 507-751 63-356 (357)
91 4gga_A P55CDC, cell division c 100.0 1.5E-29 5E-34 283.4 38.9 247 501-751 139-398 (420)
92 3vu4_A KMHSV2; beta-propeller 100.0 3.4E-30 1.2E-34 282.7 32.5 275 501-786 11-333 (355)
93 1k8k_C P40, ARP2/3 complex 41 100.0 1.4E-29 4.9E-34 275.4 35.4 269 468-749 23-362 (372)
94 3ei3_B DNA damage-binding prot 100.0 5.9E-30 2E-34 281.6 32.0 264 467-748 88-382 (383)
95 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.7E-29 9.4E-34 283.8 37.4 271 510-786 5-388 (450)
96 3gre_A Serine/threonine-protei 100.0 5E-31 1.7E-35 295.5 22.0 261 517-786 35-356 (437)
97 2xyi_A Probable histone-bindin 100.0 9.6E-30 3.3E-34 286.2 31.7 242 545-786 122-407 (430)
98 4e54_B DNA damage-binding prot 100.0 2.9E-30 9.8E-35 290.8 26.4 280 457-751 122-433 (435)
99 2j04_B YDR362CP, TAU91; beta p 100.0 4.7E-31 1.6E-35 305.0 18.9 253 519-773 171-458 (524)
100 4a11_B DNA excision repair pro 100.0 7.7E-29 2.6E-33 272.5 35.6 312 465-786 56-402 (408)
101 3dwl_C Actin-related protein 2 100.0 4.3E-30 1.5E-34 281.5 24.9 267 467-746 25-377 (377)
102 3lrv_A PRE-mRNA-splicing facto 100.0 1.9E-30 6.6E-35 282.3 21.4 260 516-785 43-329 (343)
103 4ggc_A P55CDC, cell division c 100.0 3E-28 1E-32 259.0 37.3 242 504-749 62-316 (318)
104 2xyi_A Probable histone-bindin 100.0 4.7E-29 1.6E-33 280.5 30.4 247 503-749 122-411 (430)
105 1l0q_A Surface layer protein; 100.0 8.5E-28 2.9E-32 264.5 39.0 260 522-786 3-272 (391)
106 2aq5_A Coronin-1A; WD40 repeat 100.0 8.2E-29 2.8E-33 275.1 30.1 273 466-752 48-346 (402)
107 1p22_A F-BOX/WD-repeat protein 100.0 1.4E-28 4.7E-33 276.6 32.2 274 467-767 145-433 (435)
108 2j04_A TAU60, YPL007P, hypothe 100.0 2.6E-29 8.7E-34 286.7 26.2 255 508-786 14-294 (588)
109 3jro_A Fusion protein of prote 100.0 2.9E-29 9.8E-34 302.9 26.4 247 502-786 2-282 (753)
110 3dw8_B Serine/threonine-protei 100.0 4.3E-29 1.5E-33 279.4 25.6 236 549-786 26-370 (447)
111 1l0q_A Surface layer protein; 100.0 2.3E-26 8E-31 253.0 43.4 248 500-753 23-280 (391)
112 4h5i_A Guanine nucleotide-exch 100.0 5.3E-28 1.8E-32 266.5 27.9 241 503-749 67-344 (365)
113 1yfq_A Cell cycle arrest prote 100.0 2E-27 6.8E-32 255.7 31.3 259 467-745 25-321 (342)
114 4gq1_A NUP37; propeller, trans 100.0 1.7E-28 5.9E-33 272.9 22.1 263 505-782 85-383 (393)
115 3mmy_A MRNA export factor; mRN 100.0 1.1E-26 3.6E-31 251.3 35.3 269 466-752 55-353 (368)
116 3f3f_A Nucleoporin SEH1; struc 100.0 2.8E-26 9.5E-31 244.8 29.6 275 467-751 25-340 (351)
117 2w18_A PALB2, fancn, partner a 100.0 1.7E-25 5.9E-30 241.0 35.0 284 496-786 22-354 (356)
118 2j04_A TAU60, YPL007P, hypothe 100.0 9.4E-28 3.2E-32 273.8 18.3 243 507-778 83-350 (588)
119 3vu4_A KMHSV2; beta-propeller 99.9 2.9E-26 9.8E-31 251.4 28.2 240 535-786 3-268 (355)
120 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.1E-25 3.7E-30 254.3 32.6 241 504-747 97-390 (450)
121 3jrp_A Fusion protein of prote 99.9 9.4E-26 3.2E-30 245.2 30.9 230 467-708 25-289 (379)
122 3lrv_A PRE-mRNA-splicing facto 99.9 7.8E-27 2.7E-31 253.8 17.9 221 558-786 43-289 (343)
123 1nir_A Nitrite reductase; hemo 99.9 1.4E-24 4.7E-29 252.2 36.5 283 500-786 170-511 (543)
124 3bws_A Protein LP49; two-domai 99.9 3.8E-24 1.3E-28 238.7 37.6 241 504-748 164-432 (433)
125 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.2E-24 1.1E-28 240.6 29.0 263 503-771 111-410 (415)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.8E-24 6.3E-29 242.5 25.1 271 510-786 63-384 (415)
127 3jro_A Fusion protein of prote 99.9 4.9E-25 1.7E-29 265.9 21.7 229 467-707 23-286 (753)
128 3vgz_A Uncharacterized protein 99.9 2.1E-22 7.3E-27 217.3 37.6 267 509-779 40-334 (353)
129 2ecf_A Dipeptidyl peptidase IV 99.9 2E-23 6.9E-28 250.1 29.5 274 509-786 36-410 (741)
130 1nir_A Nitrite reductase; hemo 99.9 5E-23 1.7E-27 239.1 31.6 266 516-786 144-455 (543)
131 2w18_A PALB2, fancn, partner a 99.9 3.4E-23 1.1E-27 223.2 27.2 254 488-746 65-355 (356)
132 4gq1_A NUP37; propeller, trans 99.9 2.9E-24 1E-28 238.8 19.5 250 467-746 103-387 (393)
133 3u4y_A Uncharacterized protein 99.9 2.6E-22 8.9E-27 215.4 33.9 268 516-786 4-301 (331)
134 1ri6_A Putative isomerase YBHE 99.9 2.4E-22 8.2E-27 215.5 31.1 262 523-786 7-305 (343)
135 2ojh_A Uncharacterized protein 99.9 1.5E-22 5.2E-27 211.1 26.0 251 527-780 18-293 (297)
136 1pby_B Quinohemoprotein amine 99.9 1.1E-21 3.8E-26 209.7 29.3 259 522-786 2-307 (337)
137 3u4y_A Uncharacterized protein 99.9 7.5E-21 2.6E-25 204.0 34.9 265 502-770 33-326 (331)
138 1xfd_A DIP, dipeptidyl aminope 99.9 1.1E-22 3.8E-27 242.7 22.3 273 511-786 18-390 (723)
139 3o4h_A Acylamino-acid-releasin 99.9 6.2E-22 2.1E-26 231.0 27.9 268 509-786 21-312 (582)
140 1k32_A Tricorn protease; prote 99.9 2.6E-21 8.8E-26 241.6 31.3 277 501-786 195-499 (1045)
141 2ecf_A Dipeptidyl peptidase IV 99.9 4.4E-21 1.5E-25 229.7 31.5 269 511-785 110-455 (741)
142 1ri6_A Putative isomerase YBHE 99.9 1.3E-20 4.4E-25 201.9 31.9 262 507-771 35-335 (343)
143 2z3z_A Dipeptidyl aminopeptida 99.9 4.8E-21 1.6E-25 228.3 31.0 272 509-786 81-432 (706)
144 2ojh_A Uncharacterized protein 99.9 3.6E-21 1.2E-25 200.7 25.4 235 503-739 35-293 (297)
145 1k32_A Tricorn protease; prote 99.9 1.8E-20 6E-25 234.1 30.5 276 502-786 92-458 (1045)
146 3pe7_A Oligogalacturonate lyas 99.9 2.5E-20 8.6E-25 204.5 25.9 283 501-785 22-378 (388)
147 1jmx_B Amine dehydrogenase; ox 99.9 7E-20 2.4E-24 197.0 27.3 267 514-786 4-322 (349)
148 1xfd_A DIP, dipeptidyl aminope 99.9 5.3E-20 1.8E-24 219.5 29.2 273 503-777 51-428 (723)
149 3hfq_A Uncharacterized protein 99.9 3E-19 1E-23 193.5 32.2 262 523-785 4-313 (347)
150 3vgz_A Uncharacterized protein 99.9 4.2E-19 1.4E-23 191.4 32.8 232 552-786 41-300 (353)
151 1pby_B Quinohemoprotein amine 99.9 1.2E-19 4E-24 193.9 27.2 235 511-752 35-314 (337)
152 3scy_A Hypothetical bacterial 99.8 2.1E-18 7.2E-23 188.0 35.2 257 508-767 48-360 (361)
153 3hfq_A Uncharacterized protein 99.8 8.1E-19 2.8E-23 190.0 31.6 245 507-753 37-324 (347)
154 3scy_A Hypothetical bacterial 99.8 1.3E-18 4.6E-23 189.6 33.5 263 521-785 13-333 (361)
155 2oit_A Nucleoporin 214KDA; NH2 99.8 3.7E-19 1.3E-23 200.7 27.5 237 508-746 35-331 (434)
156 1z68_A Fibroblast activation p 99.8 9.9E-21 3.4E-25 226.2 15.3 266 514-786 20-388 (719)
157 2z3z_A Dipeptidyl aminopeptida 99.8 3.3E-19 1.1E-23 212.4 27.7 255 502-761 113-447 (706)
158 1jof_A Carboxy-CIS,CIS-muconat 99.8 9.5E-18 3.3E-22 184.0 29.7 262 523-786 4-338 (365)
159 3c5m_A Oligogalacturonate lyas 99.8 1.1E-18 3.7E-23 191.3 21.2 271 511-785 37-378 (396)
160 1z68_A Fibroblast activation p 99.8 3.4E-18 1.2E-22 204.2 23.1 272 511-786 61-440 (719)
161 3o4h_A Acylamino-acid-releasin 99.8 3.7E-18 1.2E-22 199.0 22.5 228 551-786 21-273 (582)
162 4a5s_A Dipeptidyl peptidase 4 99.8 5.1E-18 1.7E-22 204.1 24.4 261 510-777 17-381 (740)
163 2oit_A Nucleoporin 214KDA; NH2 99.8 9.6E-18 3.3E-22 189.2 24.4 210 531-749 23-279 (434)
164 1jof_A Carboxy-CIS,CIS-muconat 99.8 5.8E-17 2E-21 177.7 29.0 242 508-750 38-343 (365)
165 3azo_A Aminopeptidase; POP fam 99.8 7.7E-17 2.6E-21 190.4 28.5 279 504-785 18-363 (662)
166 1jmx_B Amine dehydrogenase; ox 99.8 1.8E-16 6.2E-21 170.1 28.4 237 511-754 44-331 (349)
167 3fvz_A Peptidyl-glycine alpha- 99.7 1E-15 3.5E-20 165.5 30.7 238 509-748 23-322 (329)
168 2oiz_A Aromatic amine dehydrog 99.7 4.5E-16 1.5E-20 171.1 28.1 261 503-771 45-360 (361)
169 2gop_A Trilobed protease; beta 99.7 7.8E-16 2.7E-20 166.1 28.9 251 511-785 16-327 (347)
170 2oiz_A Aromatic amine dehydrog 99.7 1.5E-15 5E-20 167.0 28.8 260 520-786 14-331 (361)
171 1q7f_A NHL, brain tumor CG1071 99.7 9.5E-15 3.3E-19 153.5 32.9 233 548-786 26-277 (286)
172 2dg1_A DRP35, lactonase; beta 99.7 1.7E-15 5.8E-20 162.8 27.2 264 510-779 6-300 (333)
173 3fvz_A Peptidyl-glycine alpha- 99.7 3.1E-15 1.1E-19 161.7 29.3 232 551-786 23-319 (329)
174 1q7f_A NHL, brain tumor CG1071 99.7 1.3E-14 4.3E-19 152.6 33.2 235 507-749 27-281 (286)
175 2z2n_A Virginiamycin B lyase; 99.7 3.1E-13 1.1E-17 141.7 40.6 272 505-784 10-291 (299)
176 4a5s_A Dipeptidyl peptidase 4 99.7 7.4E-15 2.5E-19 176.5 31.8 262 513-778 65-435 (740)
177 3pe7_A Oligogalacturonate lyas 99.7 2.7E-15 9.2E-20 164.3 25.4 240 505-747 76-383 (388)
178 1qks_A Cytochrome CD1 nitrite 99.7 1.2E-13 4E-18 160.7 40.0 274 510-786 197-535 (567)
179 3azo_A Aminopeptidase; POP fam 99.7 3.1E-15 1E-19 176.7 23.9 239 514-755 81-376 (662)
180 2dg1_A DRP35, lactonase; beta 99.7 1.8E-13 6.2E-18 146.9 35.6 235 501-739 36-301 (333)
181 2xdw_A Prolyl endopeptidase; a 99.7 1.2E-14 4E-19 173.9 27.8 241 508-750 123-416 (710)
182 3e5z_A Putative gluconolactona 99.7 6E-14 2.1E-18 148.4 29.8 234 542-784 18-282 (296)
183 3e5z_A Putative gluconolactona 99.6 7.2E-14 2.5E-18 147.8 30.0 240 503-751 21-289 (296)
184 2gop_A Trilobed protease; beta 99.6 1.7E-14 5.7E-19 155.6 25.5 232 510-760 59-342 (347)
185 3dsm_A Uncharacterized protein 99.6 1.9E-13 6.4E-18 147.8 31.2 249 529-786 15-299 (328)
186 3c5m_A Oligogalacturonate lyas 99.6 1.4E-14 4.7E-19 158.5 22.1 235 513-753 84-389 (396)
187 2qc5_A Streptogramin B lactona 99.6 3.4E-12 1.2E-16 133.7 38.1 270 507-785 17-296 (300)
188 1rwi_B Serine/threonine-protei 99.6 1.5E-13 5E-18 142.6 26.4 237 511-750 25-266 (270)
189 1qks_A Cytochrome CD1 nitrite 99.6 1.3E-12 4.3E-17 152.0 37.1 263 519-786 165-474 (567)
190 2bkl_A Prolyl endopeptidase; m 99.6 1.8E-14 6.2E-19 171.9 21.5 245 507-756 118-405 (695)
191 1rwi_B Serine/threonine-protei 99.6 2.8E-13 9.6E-18 140.5 25.4 231 553-786 25-261 (270)
192 3dsm_A Uncharacterized protein 99.6 5.4E-13 1.8E-17 144.2 28.0 251 510-767 44-320 (328)
193 2xdw_A Prolyl endopeptidase; a 99.6 4.1E-13 1.4E-17 160.5 29.2 265 519-786 81-411 (710)
194 2mad_H Methylamine dehydrogena 99.6 8.4E-12 2.9E-16 137.7 37.2 264 517-786 28-347 (373)
195 3sjl_D Methylamine dehydrogena 99.5 8.9E-13 3.1E-17 145.0 26.8 269 515-786 38-360 (386)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 4.9E-12 1.7E-16 134.0 31.1 238 506-748 14-299 (314)
197 3no2_A Uncharacterized protein 99.5 4.8E-12 1.7E-16 133.6 28.8 210 520-736 4-231 (276)
198 2bkl_A Prolyl endopeptidase; m 99.5 6.3E-13 2.1E-17 158.5 23.9 263 518-786 76-394 (695)
199 2mad_H Methylamine dehydrogena 99.5 4.3E-11 1.5E-15 132.0 36.1 233 514-754 70-356 (373)
200 2z2n_A Virginiamycin B lyase; 99.5 3.8E-11 1.3E-15 125.6 33.7 232 549-786 12-252 (299)
201 1yr2_A Prolyl oligopeptidase; 99.5 1.4E-12 4.7E-17 156.8 24.4 242 508-754 161-447 (741)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.4E-11 4.7E-16 130.5 29.0 232 551-786 17-296 (314)
203 1yr2_A Prolyl oligopeptidase; 99.4 4.4E-12 1.5E-16 152.4 24.7 263 519-786 116-438 (741)
204 3sjl_D Methylamine dehydrogena 99.4 1.3E-11 4.4E-16 135.8 26.1 262 499-769 69-384 (386)
205 3no2_A Uncharacterized protein 99.4 1.7E-11 6E-16 129.3 25.2 208 562-777 4-231 (276)
206 3c75_H MADH, methylamine dehyd 99.4 1.8E-11 6.2E-16 136.8 25.1 264 519-786 82-399 (426)
207 3hrp_A Uncharacterized protein 99.4 9.1E-11 3.1E-15 131.0 30.7 230 510-746 131-408 (409)
208 2qe8_A Uncharacterized protein 99.4 5E-12 1.7E-16 137.4 19.3 263 499-781 9-313 (343)
209 2qc5_A Streptogramin B lactona 99.4 6.9E-10 2.3E-14 116.0 34.8 232 549-786 17-257 (300)
210 3g4e_A Regucalcin; six bladed 99.4 3.7E-10 1.3E-14 119.9 32.8 227 507-738 10-262 (297)
211 1xip_A Nucleoporin NUP159; bet 99.4 7.1E-12 2.4E-16 138.3 20.0 172 511-695 39-232 (388)
212 3hrp_A Uncharacterized protein 99.4 1.1E-10 3.7E-15 130.4 29.1 229 552-785 131-406 (409)
213 3g4e_A Regucalcin; six bladed 99.4 4.9E-10 1.7E-14 118.9 32.0 224 547-778 8-261 (297)
214 3iuj_A Prolyl endopeptidase; h 99.4 3.3E-11 1.1E-15 143.8 25.4 243 507-755 126-412 (693)
215 2ghs_A AGR_C_1268P; regucalcin 99.4 1E-09 3.5E-14 118.2 32.9 221 511-739 50-293 (326)
216 2ghs_A AGR_C_1268P; regucalcin 99.3 1.5E-09 5E-14 117.0 33.0 217 553-778 50-291 (326)
217 3c75_H MADH, methylamine dehyd 99.3 7.6E-11 2.6E-15 131.7 23.0 248 499-754 109-408 (426)
218 3dr2_A Exported gluconolactona 99.3 3.6E-10 1.2E-14 120.3 26.3 230 545-784 38-302 (305)
219 3dr2_A Exported gluconolactona 99.3 6.4E-10 2.2E-14 118.3 27.4 233 504-745 39-303 (305)
220 1mda_H Methylamine dehydrogena 99.3 3.6E-11 1.2E-15 132.1 16.6 256 499-768 56-366 (368)
221 1yiq_A Quinohemoprotein alcoho 99.2 2.3E-09 7.7E-14 127.7 26.0 262 521-786 70-502 (689)
222 3iuj_A Prolyl endopeptidase; h 99.2 1.3E-09 4.5E-14 129.8 23.4 232 549-786 126-402 (693)
223 1kb0_A Quinohemoprotein alcoho 99.2 3.2E-09 1.1E-13 126.1 26.0 261 521-786 77-504 (677)
224 2hz6_A Endoplasmic reticulum t 99.2 2.7E-13 9.4E-18 149.3 -8.7 202 520-730 8-216 (369)
225 1xip_A Nucleoporin NUP159; bet 99.2 7.9E-10 2.7E-14 121.9 19.0 168 596-777 39-232 (388)
226 3q7m_A Lipoprotein YFGL, BAMB; 99.1 1.4E-08 4.6E-13 111.0 27.7 253 520-786 102-375 (376)
227 1npe_A Nidogen, entactin; glyc 99.1 9.3E-08 3.2E-12 99.3 32.7 245 522-771 2-263 (267)
228 1mda_H Methylamine dehydrogena 99.1 8.5E-10 2.9E-14 121.1 16.9 242 532-786 47-343 (368)
229 3q7m_A Lipoprotein YFGL, BAMB; 99.1 3.4E-08 1.2E-12 107.9 29.7 253 521-786 53-334 (376)
230 3hxj_A Pyrrolo-quinoline quino 99.1 2.6E-09 8.9E-14 113.7 19.4 256 511-785 61-320 (330)
231 1kb0_A Quinohemoprotein alcoho 99.1 1.6E-08 5.4E-13 120.2 25.7 252 520-775 127-536 (677)
232 3hxj_A Pyrrolo-quinoline quino 99.0 3E-09 1E-13 113.2 16.3 254 515-786 25-281 (330)
233 1yiq_A Quinohemoprotein alcoho 99.0 3.6E-08 1.2E-12 117.3 26.2 252 521-776 121-536 (689)
234 2ece_A 462AA long hypothetical 99.0 2.1E-07 7E-12 103.4 29.1 219 516-736 88-399 (462)
235 2ece_A 462AA long hypothetical 99.0 2.1E-07 7.2E-12 103.3 29.1 218 558-777 88-399 (462)
236 2qe8_A Uncharacterized protein 99.0 1.2E-08 4.1E-13 110.6 18.1 225 507-744 64-317 (343)
237 2hz6_A Endoplasmic reticulum t 99.0 3.4E-10 1.2E-14 124.5 5.7 199 562-771 8-216 (369)
238 1kv9_A Type II quinohemoprotei 98.9 1.5E-07 5E-12 111.7 27.6 262 521-786 66-485 (668)
239 2iwa_A Glutamine cyclotransfer 98.9 2.3E-07 7.8E-12 96.8 25.1 203 542-749 10-238 (266)
240 4a2l_A BT_4663, two-component 98.9 3.4E-06 1.2E-10 101.8 39.2 266 509-785 262-567 (795)
241 1fwx_A Nitrous oxide reductase 98.9 1.6E-07 5.6E-12 107.5 25.8 251 524-778 18-407 (595)
242 2fp8_A Strictosidine synthase; 98.9 1.1E-06 3.8E-11 93.8 29.3 237 510-750 19-315 (322)
243 4a2l_A BT_4663, two-component 98.9 6.6E-06 2.3E-10 99.3 39.1 261 509-784 356-655 (795)
244 1npe_A Nidogen, entactin; glyc 98.9 2.6E-06 8.8E-11 88.3 30.7 216 511-730 37-263 (267)
245 3nol_A Glutamine cyclotransfer 98.8 3.8E-07 1.3E-11 94.3 22.4 192 542-738 32-245 (262)
246 1fwx_A Nitrous oxide reductase 98.8 1.2E-07 4E-12 108.7 19.9 229 520-752 100-435 (595)
247 2ad6_A Methanol dehydrogenase 98.8 8.3E-07 2.8E-11 103.2 27.2 261 521-786 62-491 (571)
248 3v9f_A Two-component system se 98.8 1.1E-05 3.6E-10 97.3 36.7 270 509-786 257-565 (781)
249 2iwa_A Glutamine cyclotransfer 98.8 2.2E-06 7.4E-11 89.4 26.3 202 497-707 7-238 (266)
250 2fp8_A Strictosidine synthase; 98.7 3.2E-06 1.1E-10 90.3 27.1 229 553-786 20-310 (322)
251 1w6s_A Methanol dehydrogenase 98.7 2.4E-06 8.3E-11 99.6 28.0 263 521-786 62-500 (599)
252 3nok_A Glutaminyl cyclase; bet 98.7 1.4E-06 4.8E-11 90.1 22.8 182 552-738 55-255 (268)
253 2p4o_A Hypothetical protein; p 98.7 1.9E-05 6.6E-10 83.6 31.7 232 500-739 23-279 (306)
254 3mbr_X Glutamine cyclotransfer 98.7 3.8E-06 1.3E-10 86.1 24.6 192 542-738 10-224 (243)
255 1k3i_A Galactose oxidase precu 98.7 4.6E-07 1.6E-11 107.1 20.1 264 514-778 190-530 (656)
256 2p4o_A Hypothetical protein; p 98.7 1.4E-05 4.6E-10 84.9 29.2 229 542-779 23-278 (306)
257 3nol_A Glutamine cyclotransfer 98.6 5.4E-06 1.8E-10 85.7 23.7 191 496-697 28-245 (262)
258 1kv9_A Type II quinohemoprotei 98.6 3.8E-06 1.3E-10 99.5 25.5 252 521-777 117-520 (668)
259 3v64_C Agrin; beta propeller, 98.6 5.5E-05 1.9E-09 82.1 32.7 237 508-750 32-277 (349)
260 3v9f_A Two-component system se 98.6 3.6E-05 1.2E-09 92.7 34.4 267 509-785 210-520 (781)
261 2ad6_A Methanol dehydrogenase 98.6 6.8E-06 2.3E-10 95.5 26.5 251 521-775 115-523 (571)
262 1flg_A Protein (quinoprotein e 98.6 1.4E-05 4.8E-10 93.0 28.6 262 521-786 68-513 (582)
263 3v65_B Low-density lipoprotein 98.6 7.4E-05 2.5E-09 82.3 32.2 236 510-750 77-320 (386)
264 1ijq_A LDL receptor, low-densi 98.5 0.00028 9.7E-09 75.2 34.9 224 523-750 3-240 (316)
265 3mbr_X Glutamine cyclotransfer 98.5 2.7E-05 9.3E-10 79.7 24.8 180 592-778 16-223 (243)
266 1flg_A Protein (quinoprotein e 98.5 3.9E-05 1.3E-09 89.3 29.3 253 521-775 117-546 (582)
267 2xe4_A Oligopeptidase B; hydro 98.5 6.7E-06 2.3E-10 98.8 22.6 243 507-753 170-463 (751)
268 3nok_A Glutaminyl cyclase; bet 98.5 1.4E-05 4.8E-10 82.7 21.7 176 596-778 56-254 (268)
269 1w6s_A Methanol dehydrogenase 98.5 2.1E-05 7.1E-10 91.7 25.6 249 524-775 124-533 (599)
270 2xbg_A YCF48-like protein; pho 98.4 0.00089 3.1E-08 71.7 35.4 276 496-786 24-319 (327)
271 3tc9_A Hypothetical hydrolase; 98.4 4.7E-05 1.6E-09 85.1 26.1 230 553-785 138-426 (430)
272 1ijq_A LDL receptor, low-densi 98.4 0.00076 2.6E-08 71.8 33.7 216 565-785 3-234 (316)
273 3sov_A LRP-6, low-density lipo 98.4 0.00019 6.5E-09 76.9 28.9 225 523-750 6-240 (318)
274 3v64_C Agrin; beta propeller, 98.4 0.00025 8.6E-09 76.8 29.8 205 509-715 72-284 (349)
275 3tc9_A Hypothetical hydrolase; 98.3 9.4E-05 3.2E-09 82.7 26.3 233 511-747 138-429 (430)
276 3v65_B Low-density lipoprotein 98.3 0.00016 5.6E-09 79.4 27.9 214 509-724 115-336 (386)
277 3qqz_A Putative uncharacterize 98.3 0.00018 6E-09 74.5 25.6 195 589-785 21-249 (255)
278 3p5b_L Low density lipoprotein 98.3 0.0017 5.8E-08 71.7 35.2 225 522-750 84-322 (400)
279 4hw6_A Hypothetical protein, I 98.3 0.00036 1.2E-08 78.0 28.6 233 510-747 139-432 (433)
280 3p5b_L Low density lipoprotein 98.3 0.001 3.4E-08 73.5 31.7 217 565-785 85-316 (400)
281 4hw6_A Hypothetical protein, I 98.2 0.00023 7.8E-09 79.7 26.2 229 553-785 140-429 (433)
282 2xe4_A Oligopeptidase B; hydro 98.2 3.8E-05 1.3E-09 92.2 20.7 188 596-785 175-394 (751)
283 3qqz_A Putative uncharacterize 98.2 0.0015 5.2E-08 67.4 29.4 199 503-704 20-251 (255)
284 3amr_A 3-phytase; beta-propell 98.2 0.00038 1.3E-08 74.9 25.5 192 520-714 39-272 (355)
285 1k3i_A Galactose oxidase precu 98.2 5.1E-05 1.7E-09 89.5 20.6 223 556-779 190-476 (656)
286 3sov_A LRP-6, low-density lipo 98.2 0.0013 4.3E-08 70.4 29.7 219 565-785 6-234 (318)
287 3m0c_C LDL receptor, low-densi 98.2 0.0017 5.7E-08 78.0 33.1 234 512-750 387-634 (791)
288 3kya_A Putative phosphatase; s 98.0 0.00084 2.9E-08 75.9 25.4 239 511-752 140-479 (496)
289 3kya_A Putative phosphatase; s 98.0 0.0014 4.7E-08 74.2 26.6 230 553-785 140-471 (496)
290 3m0c_C LDL receptor, low-densi 98.0 0.0063 2.1E-07 73.0 33.8 214 565-783 397-626 (791)
291 3amr_A 3-phytase; beta-propell 97.9 0.002 6.8E-08 69.3 24.5 186 562-752 39-268 (355)
292 2ism_A Putative oxidoreductase 97.9 0.0016 5.5E-08 70.5 24.3 222 509-736 30-333 (352)
293 4a0p_A LRP6, LRP-6, low-densit 97.9 0.011 3.6E-07 69.3 32.8 218 565-785 8-233 (628)
294 3ott_A Two-component system se 97.9 0.04 1.4E-06 65.7 38.2 260 509-783 62-347 (758)
295 4a0p_A LRP6, LRP-6, low-densit 97.9 0.024 8.2E-07 66.3 35.0 222 523-750 8-239 (628)
296 3ott_A Two-component system se 97.8 0.032 1.1E-06 66.5 36.6 258 509-780 21-299 (758)
297 3s94_A LRP-6, low-density lipo 97.8 0.0042 1.4E-07 72.6 28.0 220 529-750 16-245 (619)
298 3ei3_A DNA damage-binding prot 97.8 0.019 6.3E-07 71.9 34.8 271 509-786 553-910 (1158)
299 2xzh_A Clathrin heavy chain 1; 97.8 0.035 1.2E-06 58.8 30.5 242 530-782 48-325 (365)
300 1n7d_A LDL receptor, low-densi 97.8 8.7E-05 3E-09 88.2 12.0 224 529-755 384-621 (699)
301 2xzh_A Clathrin heavy chain 1; 97.7 0.068 2.3E-06 56.6 34.4 232 515-751 72-335 (365)
302 2vpj_A Kelch-like protein 12; 97.7 0.0027 9.4E-08 66.4 21.9 226 520-754 14-284 (301)
303 3a9g_A Putative uncharacterize 97.7 0.015 5.2E-07 62.9 28.4 225 509-735 28-329 (354)
304 2ism_A Putative oxidoreductase 97.7 0.0072 2.4E-07 65.4 24.9 219 552-777 31-333 (352)
305 2xbg_A YCF48-like protein; pho 97.7 0.015 5E-07 62.1 27.0 228 509-746 79-320 (327)
306 1bpo_A Protein (clathrin); cla 97.7 0.087 3E-06 57.8 32.3 242 530-782 47-324 (494)
307 1bpo_A Protein (clathrin); cla 97.7 0.11 3.9E-06 56.9 33.3 232 515-751 71-334 (494)
308 3s94_A LRP-6, low-density lipo 97.6 0.076 2.6E-06 61.9 34.3 225 523-751 319-554 (619)
309 3sre_A PON1, serum paraoxonase 97.6 0.062 2.1E-06 58.0 30.7 202 511-714 51-308 (355)
310 3a9g_A Putative uncharacterize 97.6 0.02 7E-07 61.9 26.6 222 552-777 29-330 (354)
311 1n7d_A LDL receptor, low-densi 97.6 0.00022 7.5E-09 84.8 11.7 214 510-725 406-633 (699)
312 3ei3_A DNA damage-binding prot 97.5 0.11 3.6E-06 65.1 35.2 214 566-785 709-995 (1158)
313 2p9w_A MAL S 1 allergenic prot 97.5 0.026 8.8E-07 60.1 25.0 203 549-752 10-269 (334)
314 2p9w_A MAL S 1 allergenic prot 97.5 0.025 8.7E-07 60.2 24.7 200 507-707 10-266 (334)
315 3ii7_A Kelch-like protein 7; p 97.5 0.013 4.3E-07 61.5 22.5 223 522-753 13-277 (306)
316 2g8s_A Glucose/sorbosone dehyd 97.4 0.038 1.3E-06 59.6 26.1 221 510-735 18-340 (353)
317 3sre_A PON1, serum paraoxonase 97.4 0.0092 3.2E-07 64.6 20.9 189 554-746 52-296 (355)
318 2xn4_A Kelch-like protein 2; s 97.4 0.012 4.1E-07 61.5 21.5 225 521-755 16-283 (302)
319 2g8s_A Glucose/sorbosone dehyd 97.3 0.017 5.9E-07 62.4 22.2 225 553-782 19-347 (353)
320 3das_A Putative oxidoreductase 97.3 0.12 4.2E-06 55.5 28.5 221 551-777 31-326 (347)
321 3das_A Putative oxidoreductase 97.3 0.15 5.3E-06 54.7 28.6 235 501-736 23-326 (347)
322 1zgk_A Kelch-like ECH-associat 97.2 0.015 5.2E-07 61.1 19.7 224 520-754 24-293 (308)
323 2vpj_A Kelch-like protein 12; 97.2 0.014 4.7E-07 60.9 19.1 210 562-780 14-264 (301)
324 3ii7_A Kelch-like protein 7; p 97.2 0.023 8E-07 59.3 20.9 208 564-779 13-257 (306)
325 4asc_A Kelch repeat and BTB do 97.2 0.043 1.5E-06 57.6 22.7 224 523-754 7-283 (315)
326 2xn4_A Kelch-like protein 2; s 97.1 0.031 1E-06 58.3 20.4 215 563-786 16-273 (302)
327 3s25_A Hypothetical 7-bladed b 97.1 0.12 4E-06 54.6 24.4 177 514-707 57-256 (302)
328 3s25_A Hypothetical 7-bladed b 97.0 0.032 1.1E-06 59.0 19.5 195 561-776 23-240 (302)
329 2woz_A Kelch repeat and BTB do 96.9 0.11 3.6E-06 54.7 22.0 217 532-754 25-293 (318)
330 3pbp_A Nucleoporin NUP82; beta 96.8 0.07 2.4E-06 58.5 20.1 128 656-783 41-206 (452)
331 4asc_A Kelch repeat and BTB do 96.8 0.074 2.5E-06 55.8 20.0 205 565-779 7-253 (315)
332 1cru_A Protein (soluble quinop 96.7 0.51 1.8E-05 52.6 27.5 103 552-654 27-163 (454)
333 2uvk_A YJHT; unknown function, 96.7 0.043 1.5E-06 58.7 17.5 227 520-754 19-348 (357)
334 1cru_A Protein (soluble quinop 96.5 1.2 4E-05 49.7 28.3 106 509-614 26-163 (454)
335 2woz_A Kelch repeat and BTB do 96.5 0.15 5.2E-06 53.5 19.8 205 565-779 18-263 (318)
336 1zgk_A Kelch-like ECH-associat 96.4 0.097 3.3E-06 54.7 17.5 181 520-708 70-289 (308)
337 3sbq_A Nitrous-oxide reductase 96.4 0.32 1.1E-05 55.0 21.9 253 524-778 73-454 (638)
338 1xi4_A Clathrin heavy chain; a 96.3 0.19 6.5E-06 62.8 21.7 212 530-752 47-293 (1630)
339 2be1_A Serine/threonine-protei 96.3 0.19 6.5E-06 53.8 19.2 186 564-753 11-236 (339)
340 2uvk_A YJHT; unknown function, 96.1 0.24 8.1E-06 52.8 19.0 187 520-712 65-348 (357)
341 3pbp_A Nucleoporin NUP82; beta 96.0 0.28 9.7E-06 53.8 19.1 143 517-661 28-208 (452)
342 1xi4_A Clathrin heavy chain; a 96.0 0.18 6.2E-06 62.9 19.1 233 515-752 71-335 (1630)
343 4hvt_A Ritya.17583.B, post-pro 95.6 0.94 3.2E-05 53.5 22.9 237 514-752 133-433 (711)
344 3b7f_A Glycosyl hydrolase, BNR 95.5 3.4 0.00011 44.5 27.6 258 522-784 23-367 (394)
345 2be1_A Serine/threonine-protei 95.5 0.047 1.6E-06 58.6 10.2 187 522-711 11-236 (339)
346 2zwa_A Leucine carboxyl methyl 95.3 0.52 1.8E-05 55.6 19.4 193 561-753 396-640 (695)
347 3b7f_A Glycosyl hydrolase, BNR 95.2 4.3 0.00015 43.6 27.0 254 509-767 54-391 (394)
348 2zwa_A Leucine carboxyl methyl 95.0 0.89 3.1E-05 53.6 20.3 190 519-710 396-639 (695)
349 4b8c_D Glucose-repressible alc 94.8 0.0081 2.8E-07 71.6 1.8 9 616-624 487-495 (727)
350 1tl2_A L10, protein (tachylect 94.5 3.4 0.00012 41.3 19.5 171 563-742 4-204 (236)
351 3sbq_A Nitrous-oxide reductase 94.1 2 6.8E-05 48.6 18.8 181 605-786 141-405 (638)
352 1tl2_A L10, protein (tachylect 94.0 0.44 1.5E-05 47.6 12.0 105 511-623 42-160 (236)
353 2wg3_C Hedgehog-interacting pr 93.0 14 0.00047 41.1 28.9 227 510-736 14-354 (463)
354 3qhy_B Beta-lactamase inhibito 92.1 4.2 0.00015 41.9 17.0 241 511-773 25-268 (282)
355 3uc1_A DNA gyrase subunit A; D 91.5 16 0.00054 38.6 21.8 259 521-780 3-321 (327)
356 3qhy_B Beta-lactamase inhibito 91.4 5.2 0.00018 41.2 16.7 214 553-785 25-242 (282)
357 2wg3_C Hedgehog-interacting pr 91.2 21 0.00072 39.5 28.6 223 553-777 15-354 (463)
358 4b8c_D Glucose-repressible alc 90.9 0.046 1.6E-06 65.1 0.2 8 290-297 50-57 (727)
359 3iot_A Maltose-binding protein 89.6 0.053 1.8E-06 60.4 -0.7 11 284-294 284-294 (449)
360 3q6k_A 43.2 kDa salivary prote 89.2 27 0.00092 37.6 23.7 160 618-777 124-342 (381)
361 1zi0_A DNA gyrase subunit A; b 88.1 27 0.00093 36.3 22.9 227 519-748 1-277 (307)
362 3mvd_K Regulator of chromosome 86.7 38 0.0013 36.5 33.7 221 553-785 76-370 (423)
363 3l6v_A GYRA, DNA gyrase subuni 85.2 44 0.0015 35.8 23.7 230 517-747 3-315 (370)
364 1uuj_A Platelet-activating fac 84.6 0.42 1.4E-05 40.1 2.2 51 7-58 7-57 (88)
365 1sqj_A OXG-RCBH, oligoxylogluc 84.6 72 0.0025 37.7 26.0 142 551-696 14-189 (789)
366 1sqj_A OXG-RCBH, oligoxylogluc 84.5 72 0.0025 37.7 26.5 155 497-655 4-190 (789)
367 1suu_A DNA gyrase subunit A; t 82.6 49 0.0017 34.4 25.6 185 560-748 5-231 (312)
368 1suu_A DNA gyrase subunit A; t 82.3 50 0.0017 34.3 26.4 224 519-746 6-281 (312)
369 1qb3_A Cyclin-dependent kinase 79.0 0.42 1.4E-05 43.5 0.2 9 162-170 12-20 (150)
370 2xtc_A F-box-like/WD repeat-co 77.8 1.5 5.3E-05 36.9 3.3 33 13-45 7-39 (90)
371 3kci_A Probable E3 ubiquitin-p 75.9 87 0.003 33.3 31.2 225 554-785 55-341 (389)
372 3uc1_A DNA gyrase subunit A; D 73.2 94 0.0032 32.5 21.8 153 510-664 42-227 (327)
373 4hvt_A Ritya.17583.B, post-pro 72.5 1.5E+02 0.0052 34.5 21.2 177 602-783 137-373 (711)
374 3no0_A DNA gyrase subunit A; D 72.1 89 0.0031 31.7 21.9 153 509-664 23-195 (276)
375 4gq2_M Nucleoporin NUP120; bet 71.9 1.8E+02 0.0061 35.2 20.9 37 678-714 237-274 (950)
376 1zi0_A DNA gyrase subunit A; b 69.5 1.1E+02 0.0037 31.6 23.6 218 561-782 1-270 (307)
377 1wp5_A Topoisomerase IV; broke 69.4 1.1E+02 0.0038 31.8 24.2 228 519-748 3-277 (323)
378 3no0_A DNA gyrase subunit A; D 68.4 1.1E+02 0.0036 31.1 21.6 192 552-748 24-246 (276)
379 4gq2_M Nucleoporin NUP120; bet 64.2 45 0.0015 40.5 13.4 38 510-547 236-273 (950)
380 3zwu_A Alkaline phosphatase PH 60.2 69 0.0024 36.6 13.1 58 637-694 478-548 (592)
381 3q6k_A 43.2 kDa salivary prote 56.0 2.1E+02 0.0073 30.5 23.8 141 595-735 152-341 (381)
382 3kci_A Probable E3 ubiquitin-p 52.1 2.3E+02 0.008 29.8 28.7 220 522-748 63-345 (389)
383 2cn3_A Xyloglucanase, beta-1,4 49.8 3.6E+02 0.012 31.3 28.3 117 496-614 10-151 (737)
384 3l6v_A GYRA, DNA gyrase subuni 48.9 2.7E+02 0.0091 29.5 25.7 220 559-782 3-309 (370)
385 3f7f_A Nucleoporin NUP120; nuc 47.6 3.7E+02 0.013 31.3 16.5 35 679-715 224-259 (729)
386 3mvd_K Regulator of chromosome 46.7 2.9E+02 0.0099 29.3 31.2 223 512-748 77-374 (423)
387 1a12_A RCC1, regulator of chro 44.4 3.1E+02 0.011 29.0 31.6 220 552-785 59-361 (413)
388 4fhn_B Nucleoporin NUP120; pro 41.3 3.3E+02 0.011 33.5 16.1 34 719-752 239-272 (1139)
389 4fhn_B Nucleoporin NUP120; pro 34.4 27 0.00092 43.4 4.6 38 510-547 238-275 (1139)
390 4a9v_A PHOX; hydrolase, beta-p 32.2 1.6E+02 0.0053 33.5 9.8 60 677-736 476-549 (592)
391 3zwu_A Alkaline phosphatase PH 32.1 95 0.0033 35.4 8.3 59 511-569 477-548 (592)
392 4a9v_A PHOX; hydrolase, beta-p 31.1 1.5E+02 0.0051 33.6 9.5 59 637-695 478-549 (592)
393 1wp5_A Topoisomerase IV; broke 30.9 4.6E+02 0.016 27.0 23.5 154 510-665 39-225 (323)
394 1zvt_A Topoisomerase IV subuni 29.0 2.8E+02 0.0097 27.6 10.5 68 717-785 83-159 (256)
395 4d9s_A UVB-resistance protein 27.4 5.6E+02 0.019 26.9 38.4 261 510-785 16-353 (406)
396 1zvt_A Topoisomerase IV subuni 27.3 4.7E+02 0.016 25.9 14.2 141 522-665 3-163 (256)
397 3f7f_A Nucleoporin NUP120; nuc 27.1 75 0.0026 37.1 6.3 37 511-549 223-259 (729)
398 2cn3_A Xyloglucanase, beta-1,4 26.4 7.9E+02 0.027 28.3 25.1 59 553-613 24-91 (737)
399 3mez_B Mannose-specific lectin 23.9 3.4E+02 0.012 23.1 9.6 26 680-706 59-84 (113)
400 2zux_A YESW protein; beta-prop 22.3 8.7E+02 0.03 27.3 24.0 267 507-785 176-528 (591)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.2e-42 Score=387.34 Aligned_cols=283 Identities=24% Similarity=0.486 Sum_probs=265.5
Q ss_pred eEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 502 VSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
...+.+|.++|+|++|+|++.+|++|+.||+|+|||+.+++....+.+|...|++++|+|++++|++|+.|++|+|||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeE
Q 044075 582 KPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVV 658 (786)
Q Consensus 582 s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I 658 (786)
+.+ ++..+.+|...|.+++|+|++..+ ++++.|++|++||++++.++..+. ..+..+.+++++.+|++++.|+.|
T Consensus 181 ~~~-~~~~~~~h~~~V~~v~~~p~~~~l-~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v 258 (410)
T 1vyh_C 181 GFE-CIRTMHGHDHNVSSVSIMPNGDHI-VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258 (410)
T ss_dssp SSC-EEECCCCCSSCEEEEEECSSSSEE-EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCc-eeEEEcCCCCCEEEEEEeCCCCEE-EEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeE
Confidence 766 678889999999999999998755 489999999999999988776654 567889999999999999999999
Q ss_pred EEEEcCCCcEEEEEecCCCCEEEEEEcCC--------------------CCEEEEEeCC-eEEEEECCCCeeEEEEccCC
Q 044075 659 SIFDVETDRLTHSFKGHSTEIHSVCWDTN--------------------GEYLASVSQD-SVRVWSLASGECIHELSSSG 717 (786)
Q Consensus 659 ~iwD~~t~~~i~~l~~h~~~I~sv~~spd--------------------g~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~ 717 (786)
++||+++++....+.+|...|.+++|+|+ +.+|++|+.| .|++||++++.++..+.+|.
T Consensus 259 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 259 RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC
Confidence 99999999999999999999999999996 6789999999 99999999999999999999
Q ss_pred CceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 718 NKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 718 ~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
..|.+++|+|++.+|++++.|+.|++||+.+++++ .+.+|...|++++|+|++.+|++|+.||+|+||+
T Consensus 339 ~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 99999999999999999999999999999988765 6678999999999999999999999999999997
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.5e-41 Score=370.27 Aligned_cols=288 Identities=19% Similarity=0.362 Sum_probs=264.5
Q ss_pred ceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEE
Q 044075 497 FSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVR 576 (786)
Q Consensus 497 ~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~ 576 (786)
+.++...++++|.+.|++++|+|++++|++|+.||+|+|||+.+++.+..+..|...|.+++|+|++++|++|+.|+.|+
T Consensus 43 ~~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~ 122 (340)
T 1got_B 43 IQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122 (340)
T ss_dssp CCCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred ccchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEE
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCc---ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEE
Q 044075 577 IWDAAKPN---FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLL 650 (786)
Q Consensus 577 VWdl~s~~---~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll 650 (786)
+|++.+.. .....+.+|...|.++.|++++. +++++.|+.|++||+++++.+..+. +.+.+++|+|++.+|+
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEECccCCCcceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE
Confidence 99998754 24556789999999999998764 5688999999999999988776654 6789999999999999
Q ss_pred EEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC--CCceEEEEEeC
Q 044075 651 AAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS--GNKFHSCIFHP 727 (786)
Q Consensus 651 ~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~--~~~I~sv~fsp 727 (786)
+++.|+.|++||++++..+..+.+|...|.+++|+|++.+|++++.| +|++||+++++.+..+..+ ...|.+++|+|
T Consensus 201 sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 201 SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred EEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence 99999999999999999999999999999999999999999999999 9999999999888777543 34799999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 728 SYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 728 dg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
++.+|++++.|+.|++||+.+++.+ .+.+|...|++++|+|++.+|+||+.||.|+|||
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999887766 6779999999999999999999999999999997
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.1e-41 Score=364.68 Aligned_cols=283 Identities=16% Similarity=0.328 Sum_probs=259.1
Q ss_pred eEEeecCCCCeEEEEEcCC----CCEEEEEECCCeEEEEEcCCCee--eeecCCCCCCeEEEEEccCCCEEEEEeCCCcE
Q 044075 502 VSSIRKSSSKVTCCHFSSD----GKLLASAGHDKKVVVWNMENFQT--ECTPDDHNHIITDVRFRPNSTQLATSSFDKTV 575 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpd----g~~Lasgs~Dg~V~IWdl~t~~~--~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I 575 (786)
++.+.+|.+.|++++|+|+ +.+|++|+.|++|+||++.+.+. ...+.+|...|.+++|++++.++++++.|++|
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 4567789999999999984 67999999999999999987654 45689999999999999999999999999999
Q ss_pred EEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEE
Q 044075 576 RIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAA 652 (786)
Q Consensus 576 ~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~g 652 (786)
++||+.+++ .+..+..|...+.+++|+|++..++ +++.|+.|++||+++++....+. ..+.+++|+|++++|+++
T Consensus 105 ~lWd~~~~~-~~~~~~~~~~~~~~~~~spdg~~l~-~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg 182 (321)
T 3ow8_A 105 RLWDLENGK-QIKSIDAGPVDAWTLAFSPDSQYLA-TGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 182 (321)
T ss_dssp EEEETTTTE-EEEEEECCTTCCCCEEECTTSSEEE-EECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCC-EEEEEeCCCccEEEEEECCCCCEEE-EEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEE
Confidence 999999876 5777888889999999999988655 88999999999999887665543 568899999999999999
Q ss_pred ECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCE
Q 044075 653 ASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPT 731 (786)
Q Consensus 653 s~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~ 731 (786)
+.|+.|++||+++++.+..+.+|...|.+++|+|++.+|++++.| .|+|||+++++++..+..|...|.+++|+|++.+
T Consensus 183 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 262 (321)
T 3ow8_A 183 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTH 262 (321)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred cCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCE
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 732 LMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 732 L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|++++.|+.|+|||+.+++++ .+..|...|++++|+|++.+|++++.||.|+|||
T Consensus 263 l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 263 FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 999999999999999999877 5678999999999999999999999999999997
No 4
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.7e-40 Score=361.96 Aligned_cols=290 Identities=17% Similarity=0.316 Sum_probs=262.2
Q ss_pred cceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcE
Q 044075 496 AFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTV 575 (786)
Q Consensus 496 ~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I 575 (786)
.+..+...++.+|.+.|+|++|+|++++||+|+.||+|+|||..+++....+..|...|.+++|+|++.+|++++.|+.|
T Consensus 51 ~~~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 51 QFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp CCCCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEE
T ss_pred ccccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCE
Confidence 34457788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCc-----ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeC--C
Q 044075 576 RIWDAAKPN-----FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQP--R 645 (786)
Q Consensus 576 ~VWdl~s~~-----~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp--~ 645 (786)
++|++.... .....+..|...|.+++|+|++..++ +++.|++|++||+++++++..+. ..+.+++|+| +
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 209 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQIL-TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET 209 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEE-EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSS
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEE-EEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCC
Confidence 999986432 23456778999999999999887655 88999999999999988876654 5677888877 5
Q ss_pred CCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC--CCceEE
Q 044075 646 LGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS--GNKFHS 722 (786)
Q Consensus 646 g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~--~~~I~s 722 (786)
+..|++++.|+.|++||+++++++..+.+|...|.+++|+|++.+|++++.| +|++||++.++.+..+..+ ...+.+
T Consensus 210 g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~ 289 (354)
T 2pbi_B 210 GNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASS 289 (354)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeE
Confidence 6899999999999999999999999999999999999999999999999999 9999999999887777544 347899
Q ss_pred EEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 723 CIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 723 v~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
++|+|++.+|++++.|+.|++||+.+++.+ .+.+|...|++++|+|++.+|++|+.||+|+||+
T Consensus 290 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 290 VDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999999999888765 6679999999999999999999999999999996
No 5
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.9e-41 Score=372.97 Aligned_cols=289 Identities=19% Similarity=0.356 Sum_probs=261.1
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
.+....++.+|.+.|+|++|+|++++|++|+.||+|+|||+.+++....+..|...|.+++|+|++++|++|+.|+.|+|
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~i 134 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSI 134 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEE
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEE
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCc------ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee--------cCCeEEEEEe
Q 044075 578 WDAAKPN------FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS--------KGGTVQVRFQ 643 (786)
Q Consensus 578 Wdl~s~~------~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~--------~~~i~~i~~s 643 (786)
||+.+.. .....+.+|.+.|.++.|.|++...+++|+.|++|++||+.+++.+..+ ...+.+++|+
T Consensus 135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 9987532 2345678999999999999988777789999999999999998877654 3567888997
Q ss_pred C-CCCEEEEEECCCeEEEEEcC-CCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCC--
Q 044075 644 P-RLGLLLAAASENVVSIFDVE-TDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGN-- 718 (786)
Q Consensus 644 p-~g~~Ll~gs~dg~I~iwD~~-t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~-- 718 (786)
+ ++..|++++.|+.|++||++ ....+..+.+|...|.+++|+|++.+|++++.| +|+|||+++++++..+..+..
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred cCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 6 78899999999999999998 457788899999999999999999999999999 999999999999888765432
Q ss_pred -----ceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEE-E----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 719 -----KFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMT-I----AAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 719 -----~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~-~----~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.|.+++|+|++.+|++++.||.|++||+..++... + .+|...|++++|+|++.+|+||+.||.|+||+
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 48899999999999999999999999999887663 3 57999999999999999999999999999996
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.8e-40 Score=350.27 Aligned_cols=284 Identities=15% Similarity=0.294 Sum_probs=254.1
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
++..+++.+|.+.|++++|+|++++|++|+.||.|+|||+.++..+..+..|...|.+++|+|++++|++|+.|++|++|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 45667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe-eeEe---ecCCeEEEEEeC-CCCEEEEEE
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS-CARI---SKGGTVQVRFQP-RLGLLLAAA 653 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~-~~~~---~~~~i~~i~~sp-~g~~Ll~gs 653 (786)
|+.+++ .+..+.+|...|.+++|+|++..+ ++|+.|++|++||+++.. .... +...+.+++|+| ++..|++++
T Consensus 83 d~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l-~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 83 NYNTGE-KVVDFEAHPDYIRSIAVHPTKPYV-LSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp ETTTCC-EEEEEECCSSCEEEEEECSSSSEE-EEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred ECCCCc-EEEEEeCCCCcEEEEEEcCCCCEE-EEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence 999877 577889999999999999998755 599999999999998763 3333 346789999999 578999999
Q ss_pred CCCeEEEEEcCCCcEEEEEe-cCCCCEEEEEEcC--CCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCC
Q 044075 654 SENVVSIFDVETDRLTHSFK-GHSTEIHSVCWDT--NGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSY 729 (786)
Q Consensus 654 ~dg~I~iwD~~t~~~i~~l~-~h~~~I~sv~~sp--dg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg 729 (786)
.|+.|++||+++......+. +|...|..++|+| ++.+|++++.| +|+|||+++++++.++.+|...|.+++|+|++
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~ 240 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS
T ss_pred CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCC
Confidence 99999999998876655554 4668899999987 77899999999 99999999999999999999999999999999
Q ss_pred CEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCC--EEEEEeCCCcEEE
Q 044075 730 PTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTG--MVASASHDKSVKI 784 (786)
Q Consensus 730 ~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~--~LaSgs~DG~I~I 784 (786)
++|++++.|+.|++||+.++++. .+..|...|++++|+|++. +|++|+.||.+.+
T Consensus 241 ~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~ 298 (304)
T 2ynn_A 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVL 298 (304)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEE
Confidence 99999999999999999998876 5668889999999999886 6888887775443
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=353.15 Aligned_cols=288 Identities=25% Similarity=0.471 Sum_probs=248.1
Q ss_pred eeeeeEEeecCCC-CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeee---eecCCCCCCeEEEEEccCCCEEEEEeCCC
Q 044075 498 SFNEVSSIRKSSS-KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTE---CTPDDHNHIITDVRFRPNSTQLATSSFDK 573 (786)
Q Consensus 498 ~~~~v~~l~~H~~-~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~---~~l~~h~~~V~sl~fspdg~~Lasgs~Dg 573 (786)
.+..+.++.+|.+ .|.+++|+|+|++||+|+.|++|+|||+.+.... ....+|...|++++|+|++++|++|+.|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 3467788999988 9999999999999999999999999999887643 23368999999999999999999999999
Q ss_pred cEEEEcCCCCc-ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe---eeEe---ecCCeEEEEEeCCC
Q 044075 574 TVRIWDAAKPN-FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS---CARI---SKGGTVQVRFQPRL 646 (786)
Q Consensus 574 ~I~VWdl~s~~-~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~---~~~~---~~~~i~~i~~sp~g 646 (786)
+|+|||+.... .++..+.+|...|.+++|+|+++. |++|+.|+.|++||++... ++.. +...+.+++|+|++
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~-l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNL-LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCE-EEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC
Confidence 99999998765 346778899999999999998875 5599999999999998653 2333 34678999999999
Q ss_pred CEEEEEECCCeEEEEEcCCCc--EEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC---------------Ce
Q 044075 647 GLLLAAASENVVSIFDVETDR--LTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS---------------GE 708 (786)
Q Consensus 647 ~~Ll~gs~dg~I~iwD~~t~~--~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s---------------~~ 708 (786)
.+|++++.|+.|++||.+++. +...+.+|...|.+++|+|++++|++++.| +|+|||... .+
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~ 242 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEE
T ss_pred CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccc
Confidence 999999999999999998875 456788999999999999999999999999 999999632 13
Q ss_pred eEEEEcc-CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe--------EE--EEcccCCCeEEEEEcCCCC-EEEEE
Q 044075 709 CIHELSS-SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK--------CM--TIAAHDCVISALAQSPVTG-MVASA 776 (786)
Q Consensus 709 ~i~~l~~-~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~--------~~--~~~~h~~~V~slafspdg~-~LaSg 776 (786)
++..+.. |...|.+++|+|++..|++++.|+.|++|+..... .. ...+|...|++|+|+|++. +||||
T Consensus 243 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~ 322 (345)
T 3fm0_A 243 CICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC 322 (345)
T ss_dssp EEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEE
T ss_pred eeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEc
Confidence 4555555 78899999999999999999999999999987542 11 2347999999999999984 99999
Q ss_pred eCCCcEEEeC
Q 044075 777 SHDKSVKIWK 786 (786)
Q Consensus 777 s~DG~I~IWd 786 (786)
+.||.|+||+
T Consensus 323 s~Dg~v~~W~ 332 (345)
T 3fm0_A 323 SDDGEVAFWK 332 (345)
T ss_dssp ETTSCEEEEE
T ss_pred CCCCcEEEEE
Confidence 9999999996
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.2e-38 Score=344.34 Aligned_cols=285 Identities=22% Similarity=0.391 Sum_probs=250.6
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCC-CEEEEEECCCeEEEEEcCC-----CeeeeecCCCCCCeEEEEEccCCCEEEEEeC
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDG-KLLASAGHDKKVVVWNMEN-----FQTECTPDDHNHIITDVRFRPNSTQLATSSF 571 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg-~~Lasgs~Dg~V~IWdl~t-----~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~ 571 (786)
.+....++.+|.+.|++++|+|++ ++|++|+.|++|++|++.. +..+..+.+|...|++++|+|++.+|++|+.
T Consensus 6 ~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 6 VLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp EEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence 456677899999999999999965 8999999999999999863 3456788999999999999999999999999
Q ss_pred CCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe--ecCCeEEEEEeCC----
Q 044075 572 DKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI--SKGGTVQVRFQPR---- 645 (786)
Q Consensus 572 Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~--~~~~i~~i~~sp~---- 645 (786)
|++|+|||+.+++ .+..+.+|...|.+++|+|++..+ ++++.|++|++||++....... +...+.+++|.|.
T Consensus 86 D~~v~~wd~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 86 DKTLRLWDVATGE-TYQRFVGHKSDVMSVDIDKKASMI-ISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp TSEEEEEETTTTE-EEEEEECCSSCEEEEEECTTSCEE-EEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC----
T ss_pred CCEEEEEECCCCC-eeEEEccCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCC
Confidence 9999999999876 578889999999999999987755 5999999999999986543322 3366788999885
Q ss_pred --CCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEE
Q 044075 646 --LGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHS 722 (786)
Q Consensus 646 --g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~s 722 (786)
+..+++++.|+.|++||+++.+....+.+|...|.+++|+|++++|++++.| .|+|||+.+++++..+..+ ..|.+
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~ 242 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFS 242 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEE
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEE
Confidence 4489999999999999999999999999999999999999999999999999 9999999999999888754 68999
Q ss_pred EEEeCCCCEEEEEECCCeEEEEECCCCeEEEE---------cccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 723 CIFHPSYPTLMVIGGYQSLELWNMAENKCMTI---------AAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 723 v~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~---------~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
++|+|++.+|++++.+ .+++|++.....+.. ..|...|.+++|+|||++|++|+.||.|+|||
T Consensus 243 ~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 243 LAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp EEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEE
Confidence 9999999988887755 599999988766522 23567899999999999999999999999996
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.6e-38 Score=338.76 Aligned_cols=287 Identities=23% Similarity=0.463 Sum_probs=258.5
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
.+....++.+|.+.|++++|+|++++|++|+.||.|+||++.+++....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 35667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEEC
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~ 654 (786)
||+.+++ ++..+.+|...|.+++|+|++..+ ++++.|+.|++||+++++++..+. ..+.+++|+|++.+|++++.
T Consensus 92 wd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 92 WDVSSGK-CLKTLKGHSNYVFCCNFNPQSNLI-VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp EETTTCC-EEEEEECCSSCEEEEEECSSSSEE-EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCc-EEEEEcCCCCCEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 9999876 577888999999999999988755 589999999999999988776554 56889999999999999999
Q ss_pred CCeEEEEEcCCCcEEEEEe-cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceE---EEEEeCCC
Q 044075 655 ENVVSIFDVETDRLTHSFK-GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFH---SCIFHPSY 729 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l~-~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~---sv~fspdg 729 (786)
|+.|++||+++++.+..+. .+...+.+++|+|++++|++++.| .|++||+++++++..+..|...+. .....+++
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence 9999999999998887765 466789999999999999999999 999999999999999988765432 23344678
Q ss_pred CEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEe--CCCcEEEeC
Q 044075 730 PTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASAS--HDKSVKIWK 786 (786)
Q Consensus 730 ~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs--~DG~I~IWd 786 (786)
.+|++++.|+.|++||+.+++.+ .+.+|...|.+++|+|++.+|++++ .|+.|+||+
T Consensus 250 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 309 (312)
T ss_dssp CEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEE
T ss_pred cEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEec
Confidence 89999999999999999998876 6778999999999999999999997 699999995
No 10
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-38 Score=353.00 Aligned_cols=278 Identities=25% Similarity=0.449 Sum_probs=247.1
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCC------------------CeEEEEEccCCCEEE
Q 044075 506 RKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNH------------------IITDVRFRPNSTQLA 567 (786)
Q Consensus 506 ~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~------------------~V~sl~fspdg~~La 567 (786)
.+|.+.|+|++|+|||++||+|+ ++.++||++.+++.+..+..|.. .|++++|+|++++|+
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 36999999999999999999986 78999999999988887765542 499999999999999
Q ss_pred EEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee--cCCeEEEEEeC-
Q 044075 568 TSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS--KGGTVQVRFQP- 644 (786)
Q Consensus 568 sgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~--~~~i~~i~~sp- 644 (786)
+|+.|++|+|||+.+++ .+..+.+|...|.+++|+|++..++ +++.|+.|++||++++++...+ ...+.+++|+|
T Consensus 140 s~~~d~~i~iwd~~~~~-~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRK-IVMILQGHEQDIYSLDYFPSGDKLV-SGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 217 (393)
T ss_dssp EEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECST
T ss_pred EEcCCCeEEEEECCCCc-EEEEEccCCCCEEEEEEcCCCCEEE-EecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECC
Confidence 99999999999999876 5778899999999999999987654 8999999999999998876554 36788999999
Q ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEE-------ecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC----------
Q 044075 645 RLGLLLAAASENVVSIFDVETDRLTHSF-------KGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS---------- 706 (786)
Q Consensus 645 ~g~~Ll~gs~dg~I~iwD~~t~~~i~~l-------~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s---------- 706 (786)
++.+|++++.|+.|++||++++..+..+ .+|...|.+++|+|++.+|++++.| .|++||+++
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 8899999999999999999999888776 5689999999999999999999999 999999975
Q ss_pred --CeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcC------CCCEEEEEe
Q 044075 707 --GECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSP------VTGMVASAS 777 (786)
Q Consensus 707 --~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafsp------dg~~LaSgs 777 (786)
+.+...+.+|...|.+++|+|++.+|++++.|+.|++||+.+++.+ .+.+|...|.+++|++ ++.+|+||+
T Consensus 298 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 298 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred CCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEEC
Confidence 3456678889999999999999999999999999999999998776 6678999999999986 678999999
Q ss_pred CCCcEEEeC
Q 044075 778 HDKSVKIWK 786 (786)
Q Consensus 778 ~DG~I~IWd 786 (786)
.||+|+||+
T Consensus 378 ~Dg~i~iW~ 386 (393)
T 1erj_A 378 GDCKARIWK 386 (393)
T ss_dssp TTSEEEEEE
T ss_pred CCCcEEECc
Confidence 999999996
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.3e-38 Score=343.99 Aligned_cols=285 Identities=20% Similarity=0.395 Sum_probs=244.4
Q ss_pred ceeeeeEEeecCCCCeEEEEE-----cC-CCCEEEEEECCCeEEEEEcCCC-------eeeeecCCCCCCeEEEEEccCC
Q 044075 497 FSFNEVSSIRKSSSKVTCCHF-----SS-DGKLLASAGHDKKVVVWNMENF-------QTECTPDDHNHIITDVRFRPNS 563 (786)
Q Consensus 497 ~~~~~v~~l~~H~~~V~~laf-----Sp-dg~~Lasgs~Dg~V~IWdl~t~-------~~~~~l~~h~~~V~sl~fspdg 563 (786)
+.+.....+++|.+.|++++| ++ ++++|++|+.|++|+|||+.+. .....+.+|...|++++|+|++
T Consensus 9 ~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~ 88 (343)
T 2xzm_R 9 IQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN 88 (343)
T ss_dssp EEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST
T ss_pred eEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC
Confidence 456678899999999999999 77 9999999999999999999753 4567789999999999999999
Q ss_pred CEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe-----ecCCeE
Q 044075 564 TQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI-----SKGGTV 638 (786)
Q Consensus 564 ~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~-----~~~~i~ 638 (786)
.+|++|+.|++|+|||+.+++ .+..+.+|...|.+++|+|++..++ +++.|+.|++||+........ +...+.
T Consensus 89 ~~l~s~s~D~~v~lwd~~~~~-~~~~~~~h~~~v~~v~~sp~~~~l~-s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 89 CFAISSSWDKTLRLWDLRTGT-TYKRFVGHQSEVYSVAFSPDNRQIL-SAGAEREIKLWNILGECKFSSAEKENHSDWVS 166 (343)
T ss_dssp TEEEEEETTSEEEEEETTSSC-EEEEEECCCSCEEEEEECSSTTEEE-EEETTSCEEEEESSSCEEEECCTTTSCSSCEE
T ss_pred CEEEEEcCCCcEEEEECCCCc-EEEEEcCCCCcEEEEEECCCCCEEE-EEcCCCEEEEEeccCCceeeeecccCCCceee
Confidence 999999999999999999876 5778899999999999999988655 888999999999985443322 335688
Q ss_pred EEEEeCCC----------CEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC-
Q 044075 639 QVRFQPRL----------GLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS- 706 (786)
Q Consensus 639 ~i~~sp~g----------~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s- 706 (786)
+++|+|++ .+|++++.|+.|++|| ........+.+|...|.+++|+|++++|++++.| .|+|||+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~ 245 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNL 245 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCC
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999987 7899999999999999 4567778888999999999999999999999999 999999954
Q ss_pred CeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE---EEc-----------ccCCCeEEEEEcCCCCE
Q 044075 707 GECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM---TIA-----------AHDCVISALAQSPVTGM 772 (786)
Q Consensus 707 ~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~---~~~-----------~h~~~V~slafspdg~~ 772 (786)
......+ .+...|.+++|+|++.+++ ++.|+.|++||+.+++.. .+. +|...|++++|+|++++
T Consensus 246 ~~~~~~~-~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~ 323 (343)
T 2xzm_R 246 TYPQREF-DAGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKK 323 (343)
T ss_dssp SSCSEEE-ECSSCEEEEEECSSSCEEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCC
T ss_pred cccceee-cCCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCe
Confidence 3344444 3456799999999998765 556888999999876532 222 67889999999999999
Q ss_pred EEEEeCCCcEEEeC
Q 044075 773 VASASHDKSVKIWK 786 (786)
Q Consensus 773 LaSgs~DG~I~IWd 786 (786)
|++|+.||.|+||+
T Consensus 324 l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 324 LFAGFTDGVIRTFS 337 (343)
T ss_dssp EEEEETTSEEEEEE
T ss_pred EEEecCCceEEEEE
Confidence 99999999999996
No 12
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.5e-39 Score=351.33 Aligned_cols=280 Identities=14% Similarity=0.205 Sum_probs=237.0
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEEC------CCeEEEEEcCCCeeeee----cCCCCCCeEEEEEccCCCEEEEEeCCCc
Q 044075 505 IRKSSSKVTCCHFSSDGKLLASAGH------DKKVVVWNMENFQTECT----PDDHNHIITDVRFRPNSTQLATSSFDKT 574 (786)
Q Consensus 505 l~~H~~~V~~lafSpdg~~Lasgs~------Dg~V~IWdl~t~~~~~~----l~~h~~~V~sl~fspdg~~Lasgs~Dg~ 574 (786)
...|...|++++|||||++||+|+. |+.|++|+..++..... ...|...|++++|+|++. +++++.||+
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~ 116 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGA 116 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSC
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCE
Confidence 3469999999999999999999997 78899999887654433 346888999999999875 567888999
Q ss_pred EEEEcCCCCccee---eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCC-
Q 044075 575 VRIWDAAKPNFCL---QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLG- 647 (786)
Q Consensus 575 I~VWdl~s~~~~~---~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~- 647 (786)
|+|||+.+++... ....+|...|.+++|+|++..++ +++.|+.|++||+++++++..+. ..+.+++|++++.
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAV-SGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEE-EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSS
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEE-EEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCc
Confidence 9999998765322 23457999999999999987655 89999999999999998877654 6788999999875
Q ss_pred EEEEEECCCeEEEEEcCCCcEEEEEe--cCCCCEEEEEEcCC-CCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEE
Q 044075 648 LLLAAASENVVSIFDVETDRLTHSFK--GHSTEIHSVCWDTN-GEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSC 723 (786)
Q Consensus 648 ~Ll~gs~dg~I~iwD~~t~~~i~~l~--~h~~~I~sv~~spd-g~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv 723 (786)
.+++++.|+.|++||+++++.+..+. .|...+.+++|+|+ +.+|++++.| .|++||+++++++..+..|...|.++
T Consensus 196 ~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l 275 (357)
T 4g56_B 196 IFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGL 275 (357)
T ss_dssp CEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEE
T ss_pred eeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEE
Confidence 78899999999999999987766544 47778999999997 5688899998 99999999999999999999999999
Q ss_pred EEeCCC-CEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcC-CCCEEEEEeCCCcEEEeC
Q 044075 724 IFHPSY-PTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSP-VTGMVASASHDKSVKIWK 786 (786)
Q Consensus 724 ~fspdg-~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafsp-dg~~LaSgs~DG~I~IWd 786 (786)
+|+|++ ++|++++.|+.|+|||+.+++++...+|.+.|++|+|+| ++.+|+||+.||.|+||+
T Consensus 276 ~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~ 340 (357)
T 4g56_B 276 AYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHH 340 (357)
T ss_dssp EECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEE
Confidence 999987 578899999999999999999998899999999999998 789999999999999996
No 13
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-38 Score=340.12 Aligned_cols=284 Identities=21% Similarity=0.364 Sum_probs=235.5
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC--eeeeec-CC-CCCCeEEEEEccCCCEEEEEeCCCc
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF--QTECTP-DD-HNHIITDVRFRPNSTQLATSSFDKT 574 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~--~~~~~l-~~-h~~~V~sl~fspdg~~Lasgs~Dg~ 574 (786)
++.+..+.+|.+.|++++|+++ +||+|+.|++|+|||+.+. .....+ .. |...|++++|+|++++|++|+.|++
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence 4567889999999999999988 9999999999999999864 445555 44 9999999999999999999999999
Q ss_pred EEEEcCCCC------cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC----eeeEe---ecCCeEEEE
Q 044075 575 VRIWDAAKP------NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY----SCARI---SKGGTVQVR 641 (786)
Q Consensus 575 I~VWdl~s~------~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~----~~~~~---~~~~i~~i~ 641 (786)
|+|||+... ..+...+.+|...|.+++|+|++.. |++|+.|++|++||++.. +++.. +...+.+++
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~-las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYY-LATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCE-EEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCE-EEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 999998542 1245678899999999999999875 459999999999999532 33333 346789999
Q ss_pred EeCCCCEEEEEECCCeEEEEEcCCC--cEEEEEecCCCCEEEEEEcCC--CCEEEEEeCC-eEEEEECCCC--------e
Q 044075 642 FQPRLGLLLAAASENVVSIFDVETD--RLTHSFKGHSTEIHSVCWDTN--GEYLASVSQD-SVRVWSLASG--------E 708 (786)
Q Consensus 642 ~sp~g~~Ll~gs~dg~I~iwD~~t~--~~i~~l~~h~~~I~sv~~spd--g~~Lasgs~D-~I~vwDl~s~--------~ 708 (786)
|+|++.+|++++.|+.|++||..++ +++..+.+|...|.+++|+|+ +.+|++++.| +|+|||+..+ .
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 9999999999999999999999876 678889999999999999998 7799999999 9999998764 4
Q ss_pred eEEEEcc-CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeE--E-E-EcccCC-CeEEEEEcC--CCCEEEEEeCCC
Q 044075 709 CIHELSS-SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKC--M-T-IAAHDC-VISALAQSP--VTGMVASASHDK 780 (786)
Q Consensus 709 ~i~~l~~-~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~--~-~-~~~h~~-~V~slafsp--dg~~LaSgs~DG 780 (786)
++..+.. |...|.+++|++++ +|++++.|+.|+|||..++.. . . ...|.. .|.+++|+| ++.+|++|+.||
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg 319 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG 319 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS
T ss_pred EeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC
Confidence 4555554 88899999999765 799999999999999988742 2 2 346877 899999999 688999999999
Q ss_pred cEEEeC
Q 044075 781 SVKIWK 786 (786)
Q Consensus 781 ~I~IWd 786 (786)
.|+|||
T Consensus 320 ~v~~W~ 325 (330)
T 2hes_X 320 IVNFWS 325 (330)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 999996
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=348.00 Aligned_cols=277 Identities=15% Similarity=0.218 Sum_probs=234.6
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC-----------CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcE
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN-----------FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTV 575 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t-----------~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I 575 (786)
.|...|.+++|+|||++|++++ |+++++||... .........|...|++++|+|++ .|++|+.||+|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 4677899999999999999887 77888886321 01111122356789999999985 78899999999
Q ss_pred EEEcCCCCccee---eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCC-E
Q 044075 576 RIWDAAKPNFCL---QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLG-L 648 (786)
Q Consensus 576 ~VWdl~s~~~~~---~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~-~ 648 (786)
+|||+.+++... ....+|...|++++|+|+++.+ ++|+.|++|++||+++++++..+. ..+.+++|++++. .
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l-~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQA-VSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEE-EEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 999999876422 2345899999999999998755 499999999999999998887654 6789999999885 6
Q ss_pred EEEEECCCeEEEEEcCCCcEEEEEe--cCCCCEEEEEEcCC-CCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEE
Q 044075 649 LLAAASENVVSIFDVETDRLTHSFK--GHSTEIHSVCWDTN-GEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCI 724 (786)
Q Consensus 649 Ll~gs~dg~I~iwD~~t~~~i~~l~--~h~~~I~sv~~spd-g~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~ 724 (786)
|++++.|+.|++||+++++.+..+. .|...+.+++|+|+ +.+|++|+.| .|+|||+++++++.++..|...|.+++
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~ 264 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLV 264 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEE
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 8899999999999999998888775 35667999999985 6788999999 999999999999999999999999999
Q ss_pred EeCCC-CEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCC-EEEEEeCCCcEEEeC
Q 044075 725 FHPSY-PTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTG-MVASASHDKSVKIWK 786 (786)
Q Consensus 725 fspdg-~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~-~LaSgs~DG~I~IWd 786 (786)
|+|++ .+|++++.|+.|+|||+.+++++.+.+|.+.|++|+|+|++. +|+||+.||+|++|+
T Consensus 265 fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~ 328 (344)
T 4gqb_B 265 FSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHV 328 (344)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEE
Confidence 99998 578999999999999999999999999999999999999986 677999999999995
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.4e-38 Score=371.70 Aligned_cols=285 Identities=24% Similarity=0.368 Sum_probs=245.5
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC-------CCCCCeEEEEEccCCCEEEEEeC
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD-------DHNHIITDVRFRPNSTQLATSSF 571 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~-------~h~~~V~sl~fspdg~~Lasgs~ 571 (786)
++.+..+.+|.+.|++++|+|||++||+|+.|++|+|||+.+++.+..+. +|...|++++|+|++++|++++.
T Consensus 180 ~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 180 FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET
T ss_pred CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC
Confidence 45677889999999999999999999999999999999999998888874 79999999999999999999999
Q ss_pred CCcEEEEcCCCCcce------------------------------------------eeeecCCCCCeEEEEEecCCCeE
Q 044075 572 DKTVRIWDAAKPNFC------------------------------------------LQTYTGHNNHVMSLDFHPKKNDL 609 (786)
Q Consensus 572 Dg~I~VWdl~s~~~~------------------------------------------~~~~~~h~~~V~sl~~sp~g~~l 609 (786)
|++|+|||+.+++.. ...+.+|...|.+++|+|++..+
T Consensus 260 D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l 339 (611)
T 1nr0_A 260 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTL 339 (611)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEE
Confidence 999999999875421 22345799999999999998865
Q ss_pred EEEEcCCCcEEEEeCCCCeeeEee--------------------------------------------------------
Q 044075 610 FCSCDGNSEIRFWNLSQYSCARIS-------------------------------------------------------- 633 (786)
Q Consensus 610 l~sgs~Dg~I~iwDl~~~~~~~~~-------------------------------------------------------- 633 (786)
+ +++.|+.|++||+.++.+....
T Consensus 340 ~-s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (611)
T 1nr0_A 340 F-SADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLA 418 (611)
T ss_dssp E-EEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEE
T ss_pred E-EEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEE
Confidence 5 8999999999998765432211
Q ss_pred -----------------------------cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcE--EEEEecCCCCEEEE
Q 044075 634 -----------------------------KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRL--THSFKGHSTEIHSV 682 (786)
Q Consensus 634 -----------------------------~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~--i~~l~~h~~~I~sv 682 (786)
...+.+++|+|++.+|++++.|+.|++||+.++.. +.. .+|...|.+|
T Consensus 419 ~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v 497 (611)
T 1nr0_A 419 VSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSV 497 (611)
T ss_dssp ECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEE
T ss_pred EeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEE
Confidence 12246788999999999999999999999987653 233 5699999999
Q ss_pred EEcCCCCEEEEEeCC-eEEEEECCC-CeeEEE--EccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe--E-EEEc
Q 044075 683 CWDTNGEYLASVSQD-SVRVWSLAS-GECIHE--LSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK--C-MTIA 755 (786)
Q Consensus 683 ~~spdg~~Lasgs~D-~I~vwDl~s-~~~i~~--l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~--~-~~~~ 755 (786)
+|+|++++|++++.| +|++||+.+ ++++.. +..|...|.+++|+|++++|++++.|+.|+|||+.++. . ..+.
T Consensus 498 ~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~ 577 (611)
T 1nr0_A 498 AFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKG 577 (611)
T ss_dssp EECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETT
T ss_pred EECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhc
Confidence 999999999999999 999999987 655443 33489999999999999999999999999999998754 2 3556
Q ss_pred cc-CCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 756 AH-DCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 756 ~h-~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+| ...|++++|+|++. |++++.|++|++||
T Consensus 578 ~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~ 608 (611)
T 1nr0_A 578 AHAMSSVNSVIWLNETT-IVSAGQDSNIKFWN 608 (611)
T ss_dssp SSTTSCEEEEEEEETTE-EEEEETTSCEEEEE
T ss_pred cCcccCeeEEEEcCCCE-EEEecCCCCEEEEe
Confidence 88 89999999999998 99999999999996
No 16
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-37 Score=333.35 Aligned_cols=285 Identities=17% Similarity=0.290 Sum_probs=257.0
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
.+.....+.+|.+.|+|++|+|++++|++|+.||.|+|||+.+++.+..+..|...|++++|+|++++|++++.||.|++
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred cccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 34556678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC-----CcEEEEeCCCCeee--------------EeecC--C
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN-----SEIRFWNLSQYSCA--------------RISKG--G 636 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D-----g~I~iwDl~~~~~~--------------~~~~~--~ 636 (786)
||+.+++ .+..+. |...|.+++|+|++..++ +++.+ +.|++||+...... ....+ .
T Consensus 101 wd~~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~-~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 101 WDVSNGQ-CVATWK-SPVPVKRVEFSPCGNYFL-AILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp EETTTCC-EEEEEE-CSSCEEEEEECTTSSEEE-EEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred EECCCCc-EEEEee-cCCCeEEEEEccCCCEEE-EecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 9999877 455555 888999999999988766 66666 99999998754321 11112 7
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEEEEcCC-CcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEc
Q 044075 637 TVQVRFQPRLGLLLAAASENVVSIFDVET-DRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELS 714 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t-~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~ 714 (786)
+.+++|+|++..|++++.|+.|++||+++ ...+..+..|...|.+++|+|++.+|++++.| .|++||+++++.+..+.
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 88999999999999999999999999999 78888999999999999999999999999999 99999999999988887
Q ss_pred cCCCceEEEEEeCCCCEEEEEECCC--------------eEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCC
Q 044075 715 SSGNKFHSCIFHPSYPTLMVIGGYQ--------------SLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHD 779 (786)
Q Consensus 715 ~~~~~I~sv~fspdg~~L~sgs~dg--------------~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~D 779 (786)
+...+..++|+|++.++++++.++ .|++||+.+++.+ .+..|...|++++|+|++++|++++.|
T Consensus 258 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 258 -TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGED 336 (369)
T ss_dssp -CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred -CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCC
Confidence 678899999999999999999988 8999999988876 567899999999999999999999999
Q ss_pred CcEEEeC
Q 044075 780 KSVKIWK 786 (786)
Q Consensus 780 G~I~IWd 786 (786)
|.|+||+
T Consensus 337 g~v~iw~ 343 (369)
T 3zwl_B 337 GFIRLHH 343 (369)
T ss_dssp SEEEEEE
T ss_pred CeEEEEE
Confidence 9999996
No 17
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.1e-36 Score=327.56 Aligned_cols=284 Identities=19% Similarity=0.390 Sum_probs=247.3
Q ss_pred eeeeEEeecCCCCeEEEEEcCC-CCEEEEEECCCeEEEEEcCCCe-----eeeecCCCCCCeEEEEEccCCCEEEEEeCC
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSD-GKLLASAGHDKKVVVWNMENFQ-----TECTPDDHNHIITDVRFRPNSTQLATSSFD 572 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpd-g~~Lasgs~Dg~V~IWdl~t~~-----~~~~l~~h~~~V~sl~fspdg~~Lasgs~D 572 (786)
+....+|++|.+.|+||+|+|+ +++||||+.|++|+|||+.+.+ ....+.+|...|++++|+|++++|++++.|
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 3455689999999999999997 6899999999999999987643 466789999999999999999999999999
Q ss_pred CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee----cCCeEEEEEeCCC--
Q 044075 573 KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS----KGGTVQVRFQPRL-- 646 (786)
Q Consensus 573 g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~----~~~i~~i~~sp~g-- 646 (786)
+.|++|+..... .......+...+..+.+++++..++ +++.|+.+++||+......... ...+..++|++++
T Consensus 108 ~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~-s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 108 GTLRLWDLTTGT-TTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp SEEEEEETTTTE-EEEEEECCSSCEEEEEECTTSSCEE-EEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS
T ss_pred ccceEEeecccc-eeeeecCCCCceeEEEEeecCccce-eecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC
Confidence 999999998866 4566667788899999999877655 8899999999999876554332 3567788888764
Q ss_pred CEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEE
Q 044075 647 GLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIF 725 (786)
Q Consensus 647 ~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~f 725 (786)
..+++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.| .|++||+++.+++..+..+ ..|.++.|
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~ 264 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCF 264 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEE
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeec
Confidence 568889999999999999999999999999999999999999999999999 9999999999999888654 68999999
Q ss_pred eCCCCEEEEEECCCeEEEEECCCCeEE----------EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 726 HPSYPTLMVIGGYQSLELWNMAENKCM----------TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 726 spdg~~L~sgs~dg~I~IwDl~~~~~~----------~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+|++. +++++.|+.|++||++++..+ ....|...|++++|+|++++|++|+.||.|+|||
T Consensus 265 ~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 265 SPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 334 (340)
T ss_dssp CSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 99876 566778999999999987665 2346889999999999999999999999999996
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.4e-36 Score=350.49 Aligned_cols=280 Identities=28% Similarity=0.503 Sum_probs=252.9
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
+.+..+.+|...|.+++|+|++++|++++.|+.|++||+.. ..+..+..|...|.+++|+|++++|++++.|+.|++||
T Consensus 294 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 294 QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 372 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEc
Confidence 45667889999999999999999999999999999999865 45567889999999999999999999999999999999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE---eecCCeEEEEEeCCCCEEEEEECCC
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR---ISKGGTVQVRFQPRLGLLLAAASEN 656 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~---~~~~~i~~i~~sp~g~~Ll~gs~dg 656 (786)
... + .+..+.+|...|.+++|+|++..++ +++.|+.|++||... +.+. .+...+.+++|+|++.+|++++.|+
T Consensus 373 ~~~-~-~~~~~~~~~~~v~~~~~s~dg~~l~-~~~~d~~v~~~~~~~-~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~ 448 (577)
T 2ymu_A 373 RNG-Q-LLQTLTGHSSSVRGVAFSPDGQTIA-SASDDKTVKLWNRNG-QLLQTLTGHSSSVWGVAFSPDDQTIASASDDK 448 (577)
T ss_dssp TTC-C-EEEEEECCSSCEEEEEECTTSSCEE-EEETTSEEEEECTTC-CEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCC-C-EEEEecCCCCCeEEEEECCCCCEEE-EEeCCCEEEEEeCCC-CEEEEecCCCCCeEEEEECCCCCEEEEEcCCC
Confidence 643 3 5778889999999999999988665 888899999999754 3333 3447789999999999999999999
Q ss_pred eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEE
Q 044075 657 VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVI 735 (786)
Q Consensus 657 ~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sg 735 (786)
.|++||. +++.+..+.+|...|.+++|+|++++|++++.| .|+|||. +++++..+..|...|++++|+|++++|+++
T Consensus 449 ~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~ 526 (577)
T 2ymu_A 449 TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASA 526 (577)
T ss_dssp EEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred EEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEE
Confidence 9999996 567888899999999999999999999999999 9999995 688899999999999999999999999999
Q ss_pred ECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 736 GGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 736 s~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+.|+.|+|||........+.+|.+.|++++|+||+++|+|++.|++|+|||
T Consensus 527 ~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 527 SDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp ETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999986655667889999999999999999999999999999998
No 19
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.4e-36 Score=320.86 Aligned_cols=279 Identities=18% Similarity=0.263 Sum_probs=250.2
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec-----CCCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP-----DDHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l-----~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
...+|.+.|++++|+|++++|++++ ||.|+|||+.+.+....+ ..|...|++++|+|++++|++++.|+.|++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 3447999999999999999999998 999999999876533322 2799999999999999999999999999999
Q ss_pred cCCCCcc-eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEEC
Q 044075 579 DAAKPNF-CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 579 dl~s~~~-~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~ 654 (786)
|+.+++. ....+..|...|.+++|+|++..++ +++.|+.|++||+++.+....+. ..+.+++|+|++..|++++.
T Consensus 125 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ECCCCCcceeeecccCCCceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec
Confidence 9988653 3556778999999999999877555 88889999999999988776554 67899999999999999999
Q ss_pred CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEE
Q 044075 655 ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLM 733 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~ 733 (786)
|+.|++||+++++.+..+. +...+.+++|+|++++|++++.+ .|++||+++++.. .+..|...|.+++|+|++++|+
T Consensus 204 dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~ 281 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFV 281 (337)
T ss_dssp TSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEE
T ss_pred CCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEE
Confidence 9999999999998888776 78899999999999999999998 9999999988754 6778899999999999999999
Q ss_pred EEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 734 VIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 734 sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+++.|+.|++||+.+++.+....|...|.+++|+|++++|++++.||.|+|||
T Consensus 282 ~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 282 STGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred EecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 99999999999999999888788999999999999999999999999999996
No 20
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1e-36 Score=335.97 Aligned_cols=284 Identities=15% Similarity=0.194 Sum_probs=252.9
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe------eeeecCCCCCCeEEEEEccC----C---CEE
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ------TECTPDDHNHIITDVRFRPN----S---TQL 566 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~------~~~~l~~h~~~V~sl~fspd----g---~~L 566 (786)
.....+.+|.+.|+||+|+| ++|++|+.||.|+|||+.+.+ .+..+..|...|++++|+|+ + .+|
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 45667889999999999998 799999999999999999887 78888899999999999999 9 999
Q ss_pred EEEeCCCcEEEEcCCCCcc----eeeeecCC-----CCCeEEEEEe----cCCCeEEEEEcCCCcEEEEeCCC------C
Q 044075 567 ATSSFDKTVRIWDAAKPNF----CLQTYTGH-----NNHVMSLDFH----PKKNDLFCSCDGNSEIRFWNLSQ------Y 627 (786)
Q Consensus 567 asgs~Dg~I~VWdl~s~~~----~~~~~~~h-----~~~V~sl~~s----p~g~~ll~sgs~Dg~I~iwDl~~------~ 627 (786)
++++.|+.|++||+.+... ....+..| ...|.+++|+ |++..++++++.||.|++||+.. .
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 9999999999999987652 15667778 5899999999 98887366888999999999987 5
Q ss_pred eeeE-----e----------ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec---C---CCCEEEEEEcC
Q 044075 628 SCAR-----I----------SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG---H---STEIHSVCWDT 686 (786)
Q Consensus 628 ~~~~-----~----------~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~---h---~~~I~sv~~sp 686 (786)
+.+. . ....+.+++|+|++ .|++++.|+.|++||+++++.+..+.. | ...|.+++|+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence 4433 2 25678999999999 999999999999999999999999998 8 99999999999
Q ss_pred CCCEEEEEeCC----eEEEEECCCCeeEEEEcc-------------CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC
Q 044075 687 NGEYLASVSQD----SVRVWSLASGECIHELSS-------------SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 687 dg~~Lasgs~D----~I~vwDl~s~~~i~~l~~-------------~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~ 749 (786)
++.+|++++.| .|++||+++++++..+.. |...|.+++|+|++.+|++++.|+.|+|||+.++
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999876 899999999999999998 8999999999999999999999999999999998
Q ss_pred eEE-EEc------cc---------------CCCeEEEEEcCCC----------CEEEEEeCCCcEEEeC
Q 044075 750 KCM-TIA------AH---------------DCVISALAQSPVT----------GMVASASHDKSVKIWK 786 (786)
Q Consensus 750 ~~~-~~~------~h---------------~~~V~slafspdg----------~~LaSgs~DG~I~IWd 786 (786)
+.+ .+. .| ...|++++|+|++ .+|++++.||.|+|||
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 324 ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 876 444 57 8999999999998 7999999999999996
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.6e-36 Score=353.52 Aligned_cols=282 Identities=16% Similarity=0.274 Sum_probs=250.9
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC--eeeeecCCCCCCeEEEEEccCCCEEEEEeCC----Cc
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF--QTECTPDDHNHIITDVRFRPNSTQLATSSFD----KT 574 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~--~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D----g~ 574 (786)
....+.+|.+.|++++|+|||++||+|+.|++|+|||+.++ .....+..|...|.+++|+|++++|++++.+ +.
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence 45678899999999999999999999999999999999753 3456778999999999999999999999875 47
Q ss_pred EEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEE
Q 044075 575 VRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLA 651 (786)
Q Consensus 575 I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~ 651 (786)
|++||... ....+.+|...|.+++|+|++..++++++.|++|++||....++...+. ..+.+++|+|++.+|++
T Consensus 131 v~~wd~~~---~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las 207 (611)
T 1nr0_A 131 VFLFDTGT---SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAS 207 (611)
T ss_dssp EEETTTCC---BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEeeCCC---CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEE
Confidence 88888533 4567889999999999999998878899999999999999887766554 56899999999999999
Q ss_pred EECCCeEEEEEcCCCcEEEEEe-------cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEE-----------
Q 044075 652 AASENVVSIFDVETDRLTHSFK-------GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHE----------- 712 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~l~-------~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~----------- 712 (786)
++.|+.|++||+.+++.+..+. +|...|.+++|+|++++|++++.| +|+|||+.+++++.+
T Consensus 208 ~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~ 287 (611)
T 1nr0_A 208 TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ 287 (611)
T ss_dssp EETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCE
T ss_pred EECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCcccee
Confidence 9999999999999999888884 799999999999999999999999 999999998766543
Q ss_pred --------------------------------EccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEE--cccC
Q 044075 713 --------------------------------LSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTI--AAHD 758 (786)
Q Consensus 713 --------------------------------l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~--~~h~ 758 (786)
+.+|...|.+++|+|++++|++++.|+.|++||+.++.+... ..|.
T Consensus 288 ~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~ 367 (611)
T 1nr0_A 288 LGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHA 367 (611)
T ss_dssp EEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCS
T ss_pred EEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCc
Confidence 346788999999999999999999999999999999988765 4699
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 759 CVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 759 ~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
..|.+++|++++ .|++++.|+.|++|+
T Consensus 368 ~~v~~~~~s~~~-~l~s~s~d~~v~~w~ 394 (611)
T 1nr0_A 368 TMITGIKTTSKG-DLFTVSWDDHLKVVP 394 (611)
T ss_dssp SCEEEEEECTTS-CEEEEETTTEEEEEC
T ss_pred ceEEEEEECCCC-cEEEEEcCCceEEee
Confidence 999999999765 788999999999996
No 22
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.7e-36 Score=357.01 Aligned_cols=283 Identities=21% Similarity=0.395 Sum_probs=246.7
Q ss_pred eeeEEeecCCCCeEEEEEcCC-CCEEEEEECCCeEEEEEcCCC-----eeeeecCCCCCCeEEEEEccCCCEEEEEeCCC
Q 044075 500 NEVSSIRKSSSKVTCCHFSSD-GKLLASAGHDKKVVVWNMENF-----QTECTPDDHNHIITDVRFRPNSTQLATSSFDK 573 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpd-g~~Lasgs~Dg~V~IWdl~t~-----~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg 573 (786)
.....+++|.+.|+||+|+|+ +++|++|+.|++|+||++.+. .....+.+|...|++++|+|++++|++|+.|+
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 452 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 445678999999999999986 479999999999999999753 45567889999999999999999999999999
Q ss_pred cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe------ecCCeEEEEEeCCC-
Q 044075 574 TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI------SKGGTVQVRFQPRL- 646 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~------~~~~i~~i~~sp~g- 646 (786)
+|+|||+.++. ....+.+|...|.+++|+|++..++ +|+.|++|++||+........ +...+.+++|+|++
T Consensus 453 ~v~vwd~~~~~-~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 530 (694)
T 3dm0_A 453 ELRLWDLAAGV-STRRFVGHTKDVLSVAFSLDNRQIV-SASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL 530 (694)
T ss_dssp EEEEEETTTTE-EEEEEECCSSCEEEEEECTTSSCEE-EEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSS
T ss_pred cEEEEECCCCc-ceeEEeCCCCCEEEEEEeCCCCEEE-EEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCC
Confidence 99999999876 5778889999999999999988665 899999999999876544433 23558999999987
Q ss_pred -CEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEE
Q 044075 647 -GLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCI 724 (786)
Q Consensus 647 -~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~ 724 (786)
..+++++.|+.|++||+++.++...+.+|...|.+++|+|++++|++++.| .|+|||+++++++..+.. ...|.+++
T Consensus 531 ~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~ 609 (694)
T 3dm0_A 531 QPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALC 609 (694)
T ss_dssp SCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEE
T ss_pred cceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEE
Confidence 589999999999999999999999999999999999999999999999999 999999999999887754 46899999
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCeEEEEc-c-------------------cCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 725 FHPSYPTLMVIGGYQSLELWNMAENKCMTIA-A-------------------HDCVISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 725 fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~-~-------------------h~~~V~slafspdg~~LaSgs~DG~I~I 784 (786)
|+|++.+|++++ ++.|+|||+.++.++... . +...|++++|+|++++|++|+.||.|+|
T Consensus 610 ~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~i 688 (694)
T 3dm0_A 610 FSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRV 688 (694)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEE
Confidence 999988776655 567999999998876322 1 1124789999999999999999999999
Q ss_pred eC
Q 044075 785 WK 786 (786)
Q Consensus 785 Wd 786 (786)
|+
T Consensus 689 W~ 690 (694)
T 3dm0_A 689 WG 690 (694)
T ss_dssp EE
T ss_pred Ee
Confidence 96
No 23
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3e-36 Score=328.36 Aligned_cols=280 Identities=16% Similarity=0.243 Sum_probs=247.0
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe--eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC
Q 044075 505 IRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ--TECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 505 l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~--~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s 582 (786)
+..|.++|++++|+|++++|++|+.|+.|+|||+.+++ .+..+..|...|++++|+|++++|++++.|+.|++||+.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 34599999999999999999999999999999999987 8888999999999999999999999999999999999987
Q ss_pred Ccce-eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee---eEe----ecCCeEEEEEeCCCCEEEEEEC
Q 044075 583 PNFC-LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC---ARI----SKGGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 583 ~~~~-~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~---~~~----~~~~i~~i~~sp~g~~Ll~gs~ 654 (786)
++.. ...+..|...|.+++|+|++..+ ++++.|+.|++||++.... ... +...+.+++|+|++.+|++++.
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKF-AVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEE-EEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEE-EEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 6522 23446789999999999998755 4888899999999987652 222 2467899999999999999999
Q ss_pred CCeEEEEEc------------------CCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc
Q 044075 655 ENVVSIFDV------------------ETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS 715 (786)
Q Consensus 655 dg~I~iwD~------------------~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~ 715 (786)
|+.|++||+ ..++.+..+..|...|.+++|+|++.+|++++.| .|++||+++++++..+..
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 999999995 4678888998999999999999999999999999 999999999999999999
Q ss_pred CCCceEEEEEeCCCCEEEEEECCCeEEEEECCC--CeE---------------------------------------EEE
Q 044075 716 SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE--NKC---------------------------------------MTI 754 (786)
Q Consensus 716 ~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~--~~~---------------------------------------~~~ 754 (786)
|...|.+++|+|++.+|+++ .|+.|++|++.+ +.. ..+
T Consensus 243 ~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (372)
T 1k8k_C 243 ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL 321 (372)
T ss_dssp SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccc
Confidence 99999999999999877776 999999999987 431 122
Q ss_pred -cccCCCeEEEEEc-CCC---CEEEEEeCCCcEEEeC
Q 044075 755 -AAHDCVISALAQS-PVT---GMVASASHDKSVKIWK 786 (786)
Q Consensus 755 -~~h~~~V~slafs-pdg---~~LaSgs~DG~I~IWd 786 (786)
.+|...|++++|+ +++ .+|+||+.||.|+|||
T Consensus 322 ~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 322 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp SSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred cccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 3899999999976 666 8999999999999996
No 24
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.1e-35 Score=338.14 Aligned_cols=280 Identities=28% Similarity=0.500 Sum_probs=253.6
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
+.+..+.+|...|.+++|+|++++|++++.|+.|++||.. ++....+.+|...|++++|+|++..|++++.|++|++||
T Consensus 253 ~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~ 331 (577)
T 2ymu_A 253 QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 331 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 4667888999999999999999999999999999999964 577788899999999999999999999999999999999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe---ecCCeEEEEEeCCCCEEEEEECCC
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI---SKGGTVQVRFQPRLGLLLAAASEN 656 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~---~~~~i~~i~~sp~g~~Ll~gs~dg 656 (786)
+.... +..+.+|...|.+++|+|++..++ +++.|+.|++||... +.+.. +...+.+++|+|++.+|++++.|+
T Consensus 332 ~~~~~--~~~~~~~~~~v~~~~~s~~g~~l~-~~~~dg~v~~~~~~~-~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~ 407 (577)
T 2ymu_A 332 RNGQH--LQTLTGHSSSVWGVAFSPDGQTIA-SASDDKTVKLWNRNG-QLLQTLTGHSSSVRGVAFSPDGQTIASASDDK 407 (577)
T ss_dssp TTSCE--EEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTC-CEEEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred CCCCe--eEEEeCCCCCEEEEEECCCCCEEE-EEeCCCEEEEEcCCC-CEEEEecCCCCCeEEEEECCCCCEEEEEeCCC
Confidence 87543 667888999999999999988654 888999999999754 33333 346789999999999999999999
Q ss_pred eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEE
Q 044075 657 VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVI 735 (786)
Q Consensus 657 ~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sg 735 (786)
.|++||. +++.+..+.+|...|.+++|+|++++|++++.| .|++||. +++.+..+..|...|.+++|+|++++|+++
T Consensus 408 ~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~ 485 (577)
T 2ymu_A 408 TVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASA 485 (577)
T ss_dssp EEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEE
T ss_pred EEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 9999995 567888899999999999999999999999999 9999996 567888999999999999999999999999
Q ss_pred ECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 736 GGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 736 s~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+.|+.|++||........+.+|...|++|+|+|++++|++++.||.|+|||
T Consensus 486 ~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 486 SDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp ETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 999999999976666668889999999999999999999999999999997
No 25
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-37 Score=339.94 Aligned_cols=280 Identities=18% Similarity=0.244 Sum_probs=249.1
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC----CeeeeecCCCCCCeEEEEEccC-CCEEEEEeCCCcEEEEcCC
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN----FQTECTPDDHNHIITDVRFRPN-STQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t----~~~~~~l~~h~~~V~sl~fspd-g~~Lasgs~Dg~I~VWdl~ 581 (786)
.|...|++++|+|++++|++|+.||.|+|||+.+ .+.+..+..|...|++++|+|+ +.+|++++.|+.|++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 5889999999999999999999999999999987 4588889999999999999998 8999999999999999998
Q ss_pred CCc------ce--eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee---------cCCeEEEEEeC
Q 044075 582 KPN------FC--LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS---------KGGTVQVRFQP 644 (786)
Q Consensus 582 s~~------~~--~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~---------~~~i~~i~~sp 644 (786)
+.. .. ...+..|...|.+++|+|++..++++++.|+.|++||+++.+.+..+ ...+.+++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 865 22 22346789999999999997778889999999999999998876654 34588999999
Q ss_pred CC-CEEEEEECCC---eEEEEEcCCC-cEEEEEe-cCCCCEEEEEEcC-CCCEEEEEeCC-eEEEEECCCCeeEEEEccC
Q 044075 645 RL-GLLLAAASEN---VVSIFDVETD-RLTHSFK-GHSTEIHSVCWDT-NGEYLASVSQD-SVRVWSLASGECIHELSSS 716 (786)
Q Consensus 645 ~g-~~Ll~gs~dg---~I~iwD~~t~-~~i~~l~-~h~~~I~sv~~sp-dg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~ 716 (786)
++ ..+++++.|+ .|++||++++ .++..+. +|...|.+++|+| ++.+|++++.| .|++||+++++++..+..|
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~ 304 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR 304 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC
Confidence 97 6899999998 9999999986 6677777 8999999999999 99999999999 9999999999999999999
Q ss_pred CCceEEEEEeCCC-CEEEEEECCCeEEEEECCCCeEEEE------------------------------------cccCC
Q 044075 717 GNKFHSCIFHPSY-PTLMVIGGYQSLELWNMAENKCMTI------------------------------------AAHDC 759 (786)
Q Consensus 717 ~~~I~sv~fspdg-~~L~sgs~dg~I~IwDl~~~~~~~~------------------------------------~~h~~ 759 (786)
...|.+++|+|++ .+|++++.|+.|+|||+.+...... ..|..
T Consensus 305 ~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (416)
T 2pm9_A 305 GNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGE 384 (416)
T ss_dssp SSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCC
T ss_pred CCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccC
Confidence 9999999999999 8999999999999999987642100 01677
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 760 VISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 760 ~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.|.+++|+|+|++|++++.||.|+||+
T Consensus 385 ~~~~~~~s~dg~~la~~~~d~~v~~w~ 411 (416)
T 2pm9_A 385 PSPAAHWAFGGKLVQITPDGKGVSITN 411 (416)
T ss_dssp CSCCCEEETTTEEECBCTTSSCBCCBC
T ss_pred CccceEEeeCCeEEEEeCCCCeEEEEE
Confidence 888999999999999999999999997
No 26
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-35 Score=310.38 Aligned_cols=278 Identities=15% Similarity=0.246 Sum_probs=247.1
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
.++.+..+.+|.+.|+|++| +++++|++|+.||.|+|||+.+.+....+..|...|.+++|+|++.+|++++.|+.|++
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 45678899999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCc--ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe---ecCCeEEEEEeC-CCCEEEE
Q 044075 578 WDAAKPN--FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI---SKGGTVQVRFQP-RLGLLLA 651 (786)
Q Consensus 578 Wdl~s~~--~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~---~~~~i~~i~~sp-~g~~Ll~ 651 (786)
|++.... .....+.+|...|.+++|. ++ ++++++.|+.|++|| ....... +...+.+++|.+ ++..+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSFQ--DG-VVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLT 160 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEE
T ss_pred EEeeecCCCCcccchhhcccCEEEEEec--CC-EEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEE
Confidence 9987653 3466778899999999994 34 566899999999999 3333332 446788899888 8999999
Q ss_pred EECCCeEEEEEcCCCcEEEEEec-CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCC
Q 044075 652 AASENVVSIFDVETDRLTHSFKG-HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSY 729 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~l~~-h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg 729 (786)
++.|+.|++|| ..+....+.. |...|.+++|+|++. |++++.| .|++||+++++.+..+..|...|.+++|+|++
T Consensus 161 ~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 237 (313)
T 3odt_A 161 ASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG 237 (313)
T ss_dssp EETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred EECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC
Confidence 99999999999 4567777777 999999999999998 8888888 99999999999999999999999999999999
Q ss_pred CEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 730 PTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 730 ~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.|++++.|+.|++||+.+++.. .+..|...|++++|+|++. +++++.||.|+|||
T Consensus 238 -~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 238 -DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFS 293 (313)
T ss_dssp -CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEE
T ss_pred -CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEe
Confidence 5999999999999999998876 5668888999999999998 66799999999996
No 27
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-35 Score=327.30 Aligned_cols=275 Identities=16% Similarity=0.250 Sum_probs=247.7
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC 586 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~ 586 (786)
+|.+.|++++|+|++++|++|+.||.|+||| .+++.+..+..|...|++++|+|++++|++++.|+.|++||+.+++ .
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~ 183 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT-V 183 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE-E
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc-E
Confidence 3788999999999999999999999999999 6778888999999999999999999999999999999999998876 4
Q ss_pred eeeecCCCCC---------------eEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee---cCCeEEEEEeCCCCE
Q 044075 587 LQTYTGHNNH---------------VMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS---KGGTVQVRFQPRLGL 648 (786)
Q Consensus 587 ~~~~~~h~~~---------------V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~---~~~i~~i~~sp~g~~ 648 (786)
+..+..+... +.+++|++++ .+++++.++.|++||+.+.+....+ ...+.+++|+|++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 261 (425)
T 1r5m_A 184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKL 261 (425)
T ss_dssp EEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTE
T ss_pred EEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCE
Confidence 6666666666 9999999874 3558888999999999987765544 467899999999999
Q ss_pred EEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeC
Q 044075 649 LLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHP 727 (786)
Q Consensus 649 Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fsp 727 (786)
|++++.|+.|++||+++++.+..+..|...|.+++|+|++ +|++++.| .|++||+++++.+..+..|...|.+++|+|
T Consensus 262 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~ 340 (425)
T 1r5m_A 262 LLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQ 340 (425)
T ss_dssp EEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECT
T ss_pred EEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcC
Confidence 9999999999999999999999999999999999999999 99999999 999999999999999999999999999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCe--------------------EE-EEcccCC--CeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 728 SYPTLMVIGGYQSLELWNMAENK--------------------CM-TIAAHDC--VISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 728 dg~~L~sgs~dg~I~IwDl~~~~--------------------~~-~~~~h~~--~V~slafspdg~~LaSgs~DG~I~I 784 (786)
++.+|++++.|+.|++||+.++. .+ .+..|.. .|++++|+|++++|++++.||.|+|
T Consensus 341 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 420 (425)
T 1r5m_A 341 DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSV 420 (425)
T ss_dssp TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEE
T ss_pred CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEE
Confidence 99999999999999999998776 44 6667866 9999999999999999999999999
Q ss_pred eC
Q 044075 785 WK 786 (786)
Q Consensus 785 Wd 786 (786)
||
T Consensus 421 w~ 422 (425)
T 1r5m_A 421 VA 422 (425)
T ss_dssp EE
T ss_pred Ee
Confidence 96
No 28
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-35 Score=332.56 Aligned_cols=265 Identities=22% Similarity=0.455 Sum_probs=239.8
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeee
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECT 546 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~ 546 (786)
++.....|+...++.+... +.+..+.+|.+.|++++|+|++++|++|+.|++|+|||+.+++.+..
T Consensus 122 ~l~s~s~Dg~i~vwd~~~~--------------~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~ 187 (410)
T 1vyh_C 122 VMVSASEDATIKVWDYETG--------------DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187 (410)
T ss_dssp EEEEEESSSCEEEEETTTC--------------CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEEC
T ss_pred EEEEEeCCCeEEEEECCCC--------------cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEE
Confidence 4555556777777765422 34567889999999999999999999999999999999999999999
Q ss_pred cCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC
Q 044075 547 PDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ 626 (786)
Q Consensus 547 l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~ 626 (786)
+.+|...|++++|+|++.+|++|+.|++|++||+.++. ++..+.+|...|.++.|+|++.. +++|+.|+.|++||+.+
T Consensus 188 ~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~~~~g~~-l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 188 MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQDGTL-IASCSNDQTVRVWVVAT 265 (410)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTT
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-EEEEEeCCCccEEEEEECCCCCE-EEEEcCCCeEEEEECCC
Confidence 99999999999999999999999999999999999876 67888999999999999998875 55999999999999998
Q ss_pred CeeeEeec---CCeEEEEEeCC--------------------CCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEE
Q 044075 627 YSCARISK---GGTVQVRFQPR--------------------LGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVC 683 (786)
Q Consensus 627 ~~~~~~~~---~~i~~i~~sp~--------------------g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~ 683 (786)
.++...+. ..+.+++|+|+ +.+|++++.|+.|++||++++.++..+.+|...|.+++
T Consensus 266 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~ 345 (410)
T 1vyh_C 266 KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 345 (410)
T ss_dssp CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEE
Confidence 87766543 56889999986 67899999999999999999999999999999999999
Q ss_pred EcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 684 WDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 684 ~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
|+|++.+|++++.| .|+|||+.+++++..+..|...|++++|+|++.+|++++.|+.|+||+++
T Consensus 346 ~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp ECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 99999999999999 99999999999999999999999999999999999999999999999864
No 29
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.8e-36 Score=326.98 Aligned_cols=288 Identities=17% Similarity=0.342 Sum_probs=246.7
Q ss_pred cceeeeeEEee-cCCCCeEEEEEcCC----CCEEEEEECCCeEEEEEcCCCeeeeecC-----CCCCCeEEEEEccC---
Q 044075 496 AFSFNEVSSIR-KSSSKVTCCHFSSD----GKLLASAGHDKKVVVWNMENFQTECTPD-----DHNHIITDVRFRPN--- 562 (786)
Q Consensus 496 ~~~~~~v~~l~-~H~~~V~~lafSpd----g~~Lasgs~Dg~V~IWdl~t~~~~~~l~-----~h~~~V~sl~fspd--- 562 (786)
.+.|+.+..+. +|.+.|++++|+|+ ...+++++.++.|+|||+.+++.+..+. .|...|++++|+|+
T Consensus 4 ~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 83 (366)
T 3k26_A 4 KYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNT 83 (366)
T ss_dssp -CCCEEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTT
T ss_pred eeEEEEEEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCC
Confidence 34566655555 89999999999984 4566667778899999999877766554 36688999999998
Q ss_pred -CCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee------cC
Q 044075 563 -STQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS------KG 635 (786)
Q Consensus 563 -g~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~------~~ 635 (786)
+.+|++|+.||.|++||+.+++ .+..+.+|...|.+++|+|++..++++++.||.|++||+++++....+ ..
T Consensus 84 ~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 162 (366)
T 3k26_A 84 SHPLLAVAGSRGIIRIINPITMQ-CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD 162 (366)
T ss_dssp CCEEEEEEETTCEEEEECTTTCC-EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS
T ss_pred CCCEEEEecCCCEEEEEEchhce-EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC
Confidence 6799999999999999999876 577788999999999999944556679999999999999998877664 36
Q ss_pred CeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEE----------------------------ecCCCCEEEEEEcCC
Q 044075 636 GTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSF----------------------------KGHSTEIHSVCWDTN 687 (786)
Q Consensus 636 ~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l----------------------------~~h~~~I~sv~~spd 687 (786)
.+.+++|+|++.+|++++.|+.|++||+++++.+..+ ..|...|.+++|+
T Consensus 163 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 240 (366)
T 3k26_A 163 EVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-- 240 (366)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--
T ss_pred ceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--
Confidence 7899999999999999999999999999987544333 3399999999998
Q ss_pred CCEEEEEeCC-eEEEEECCCCe--------------eEEEEccCCCceEEEEEeCC--CCEEEEEECCCeEEEEECCCCe
Q 044075 688 GEYLASVSQD-SVRVWSLASGE--------------CIHELSSSGNKFHSCIFHPS--YPTLMVIGGYQSLELWNMAENK 750 (786)
Q Consensus 688 g~~Lasgs~D-~I~vwDl~s~~--------------~i~~l~~~~~~I~sv~fspd--g~~L~sgs~dg~I~IwDl~~~~ 750 (786)
+++|++++.| .|++||+.++. .+..+..|...|.+++|+|+ +.+|++++.||.|++||+.+++
T Consensus 241 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 241 GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 7799999999 99999998764 37888889999999999999 9999999999999999999864
Q ss_pred -----EEEEccc--CCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 751 -----CMTIAAH--DCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 751 -----~~~~~~h--~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
...+..| ...|++++|+|++++|++++.||.|+|||
T Consensus 321 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 321 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWD 363 (366)
T ss_dssp GGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEE
Confidence 3356666 79999999999999999999999999996
No 30
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.2e-35 Score=316.10 Aligned_cols=268 Identities=18% Similarity=0.279 Sum_probs=242.3
Q ss_pred eeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee
Q 044075 466 SFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC 545 (786)
Q Consensus 466 ~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~ 545 (786)
.++.....|+...++.+... .......+.+|...|.+++|++++.++++++.|++|+|||+.+++.+.
T Consensus 49 ~~l~tgs~D~~v~vW~~~~~------------~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~ 116 (321)
T 3ow8_A 49 ETVVTGSLDDLVKVWKWRDE------------RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIK 116 (321)
T ss_dssp CEEEEEETTSCEEEEEEETT------------EEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CEEEEEcCCCCEEEEECCCC------------CeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEE
Confidence 34555666777777765321 233455788999999999999999999999999999999999999999
Q ss_pred ecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC
Q 044075 546 TPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS 625 (786)
Q Consensus 546 ~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~ 625 (786)
.+..|...|.+++|+|++++|++++.|+.|++||+++++ ....+..|...|.+++|+|+++.++ +++.|+.|++||++
T Consensus 117 ~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~-~~~~~~~~~~~v~~~~~spdg~~la-sg~~dg~i~iwd~~ 194 (321)
T 3ow8_A 117 SIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK-KEYSLDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDIA 194 (321)
T ss_dssp EEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS-EEEEEECSSSCEEEEEECTTSSEEE-EEETTSCEEEEETT
T ss_pred EEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc-eeEEecCCCceEEEEEECCCCCEEE-EEcCCCeEEEEECC
Confidence 999999999999999999999999999999999999877 4667778889999999999987554 88999999999999
Q ss_pred CCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEE
Q 044075 626 QYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRV 701 (786)
Q Consensus 626 ~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~v 701 (786)
+++.+..+. ..+.+++|+|++.+|++++.|+.|++||+++++.+..+.+|...|.+++|+|++.+|++++.| +|+|
T Consensus 195 ~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~i 274 (321)
T 3ow8_A 195 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKV 274 (321)
T ss_dssp TTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEE
Confidence 998877655 568899999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred EECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 702 WSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 702 wDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
||+.+++++.++..|...|.+++|+|++.+|++++.|+.|+|||..
T Consensus 275 wd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 275 WDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999999999999999964
No 31
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.1e-36 Score=323.03 Aligned_cols=281 Identities=14% Similarity=0.225 Sum_probs=238.2
Q ss_pred EeecCCCCeEEEEEcCCCCEE-EEEEC---CCeEEEEEcCCCeeeeec-CCCCCCeEEEEEccC---CCEEEEEeCCCcE
Q 044075 504 SIRKSSSKVTCCHFSSDGKLL-ASAGH---DKKVVVWNMENFQTECTP-DDHNHIITDVRFRPN---STQLATSSFDKTV 575 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~L-asgs~---Dg~V~IWdl~t~~~~~~l-~~h~~~V~sl~fspd---g~~Lasgs~Dg~I 575 (786)
.+.+|.+.|++++|+|++..| ++|+. |+.|+|||+.+++..... ..|...|++++|+|+ +.+|++++.||.|
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 456799999999999999655 55555 899999999988765443 378999999999998 6999999999999
Q ss_pred EEEcCCCCcceeeeecCCCCCeEEEEE------ecCCCeEEEEEcCCCcEEEEeCCCCe-eeEeec-------CCeEEEE
Q 044075 576 RIWDAAKPNFCLQTYTGHNNHVMSLDF------HPKKNDLFCSCDGNSEIRFWNLSQYS-CARISK-------GGTVQVR 641 (786)
Q Consensus 576 ~VWdl~s~~~~~~~~~~h~~~V~sl~~------sp~g~~ll~sgs~Dg~I~iwDl~~~~-~~~~~~-------~~i~~i~ 641 (786)
++||+.+.......+.+|...|.+++| +|++.. +++++.|+.|++||++... ....+. ..+.+++
T Consensus 93 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPE-IVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCE-EEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEeCCCCCccEEEEEecccceEEEeeccccccCCCccE-EEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 999999877567888899999999966 456664 5589999999999999876 444442 2677777
Q ss_pred ----EeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcC---CCCEEEEEeCC-eEEEEECCCCeeEEEE
Q 044075 642 ----FQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDT---NGEYLASVSQD-SVRVWSLASGECIHEL 713 (786)
Q Consensus 642 ----~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~sp---dg~~Lasgs~D-~I~vwDl~s~~~i~~l 713 (786)
|++++.++++++.|+.|++||+++++.... ..|...|.+++|+| ++.+|++++.| .|++||+++++.+..+
T Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 250 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF 250 (357)
T ss_dssp EECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE
T ss_pred EEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce
Confidence 678999999999999999999999887555 45899999999999 99999999999 9999999887654444
Q ss_pred -----ccCCCceEEEEEeCCCC-EEEEEECCCeEEEEECCCC--------------------eEEEEcccCCCeEEEEEc
Q 044075 714 -----SSSGNKFHSCIFHPSYP-TLMVIGGYQSLELWNMAEN--------------------KCMTIAAHDCVISALAQS 767 (786)
Q Consensus 714 -----~~~~~~I~sv~fspdg~-~L~sgs~dg~I~IwDl~~~--------------------~~~~~~~h~~~V~slafs 767 (786)
..|...|.+++|+|++. +|++++.|+.|++||+..+ ....+..|...|++++|+
T Consensus 251 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s 330 (357)
T 3i2n_A 251 ASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWS 330 (357)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEEC
T ss_pred eeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEc
Confidence 38999999999999998 8999999999999998753 233677899999999999
Q ss_pred CCCCEEE-EEeCCCcEEEeC
Q 044075 768 PVTGMVA-SASHDKSVKIWK 786 (786)
Q Consensus 768 pdg~~La-Sgs~DG~I~IWd 786 (786)
|++.+|+ +++.||.|+|||
T Consensus 331 ~~~~~l~~s~~~d~~i~iw~ 350 (357)
T 3i2n_A 331 PDKRGLCVCSSFDQTVRVLI 350 (357)
T ss_dssp SSSTTEEEEEETTSEEEEEE
T ss_pred CCCCeEEEEecCCCcEEEEE
Confidence 9999988 899999999996
No 32
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.5e-35 Score=324.58 Aligned_cols=281 Identities=15% Similarity=0.254 Sum_probs=236.0
Q ss_pred eeeeeEEeecCCCCeEEEEEcCCC-CEEEEEECCCeEEEEEcCCCeeeeecC--CCCCCeEEEEEcc-CCCEEEEEeCCC
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSDG-KLLASAGHDKKVVVWNMENFQTECTPD--DHNHIITDVRFRP-NSTQLATSSFDK 573 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpdg-~~Lasgs~Dg~V~IWdl~t~~~~~~l~--~h~~~V~sl~fsp-dg~~Lasgs~Dg 573 (786)
.+..+..+.+|.+.|+|++|+|++ ++|++|+.||.|+|||+.+++....+. +|...|.+++|+| ++.+|++++.|+
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 456677889999999999999999 999999999999999999887776665 6999999999999 779999999999
Q ss_pred cEEEEcCCCCcceeeeecC---CCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe---ecCCeEEEEEeCCCC
Q 044075 574 TVRIWDAAKPNFCLQTYTG---HNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI---SKGGTVQVRFQPRLG 647 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~~~~~---h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~---~~~~i~~i~~sp~g~ 647 (786)
.|++||+... ....+.. |...|.+++|+|++..+ ++++.|+.|++||++. +.+.. +...+.+++|+|++.
T Consensus 142 ~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~-~~~~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 142 ATTLRDFSGS--VIQVFAKTDSWDYWYCCVDVSVSRQML-ATGDSTGRLLLLGLDG-HEIFKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp EEEEEETTSC--EEEEEECCCCSSCCEEEEEEETTTTEE-EEEETTSEEEEEETTS-CEEEEEECSSSCEEEEEECSSCT
T ss_pred EEEEEECCCC--ceEEEeccCCCCCCeEEEEECCCCCEE-EEECCCCCEEEEECCC-CEEEEeccCCCcEEEEEECCCCC
Confidence 9999999863 3444443 44889999999998755 5889999999999964 33333 347789999999999
Q ss_pred -EEEEEECCCeEEEEEcCC----CcEEEEEecCCCCEEEEEEcC-CCCEEEEEeCC-eEEEEECCCCeeEEEEccCC---
Q 044075 648 -LLLAAASENVVSIFDVET----DRLTHSFKGHSTEIHSVCWDT-NGEYLASVSQD-SVRVWSLASGECIHELSSSG--- 717 (786)
Q Consensus 648 -~Ll~gs~dg~I~iwD~~t----~~~i~~l~~h~~~I~sv~~sp-dg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~--- 717 (786)
.|++++.|+.|++||+++ +..+..+ +|...|.+++|+| ++.+|++++.| .|++||+++++.+..+..|.
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 296 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQ 296 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCC
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccc
Confidence 899999999999999998 5677666 5999999999999 99999999999 99999999887766665442
Q ss_pred --------------CceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcc--cCCCeEEEEEcCCCCEEEEEeCCC
Q 044075 718 --------------NKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAA--HDCVISALAQSPVTGMVASASHDK 780 (786)
Q Consensus 718 --------------~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~--h~~~V~slafspdg~~LaSgs~DG 780 (786)
..+..++|+|++.+ +++.|+.|+|||+.+++++ .+.. |...+.+++|+|++.+|++|+ ||
T Consensus 297 ~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~ 373 (383)
T 3ei3_B 297 FQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GF 373 (383)
T ss_dssp CTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TT
T ss_pred cccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CC
Confidence 23344555666655 6668999999999998876 4444 567888889999999999997 99
Q ss_pred cEEEeC
Q 044075 781 SVKIWK 786 (786)
Q Consensus 781 ~I~IWd 786 (786)
.|+|||
T Consensus 374 ~i~iw~ 379 (383)
T 3ei3_B 374 NILIWN 379 (383)
T ss_dssp EEEEEE
T ss_pred cEEEEe
Confidence 999996
No 33
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-35 Score=321.70 Aligned_cols=278 Identities=14% Similarity=0.220 Sum_probs=245.0
Q ss_pred EeecCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEc----CCCe------eeeecCC----------CCCCeEEEEEccC
Q 044075 504 SIRKSSSKVTCCHFSSDGK-LLASAGHDKKVVVWNM----ENFQ------TECTPDD----------HNHIITDVRFRPN 562 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~-~Lasgs~Dg~V~IWdl----~t~~------~~~~l~~----------h~~~V~sl~fspd 562 (786)
....|.+.|+|++|+|+++ +||+|+.||.|+||++ .+++ ....+.. |...|++++|+|+
T Consensus 40 ~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 119 (425)
T 1r5m_A 40 KEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD 119 (425)
T ss_dssp EEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT
T ss_pred eeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC
Confidence 3445779999999999999 9999999999999999 8877 4444443 6889999999999
Q ss_pred CCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC---C---
Q 044075 563 STQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKG---G--- 636 (786)
Q Consensus 563 g~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~---~--- 636 (786)
+++|++++.||.|++||. ++. ....+..|...|.+++|+|++..++ +++.|+.|++||+.+++.+..+.. .
T Consensus 120 ~~~l~~~~~dg~i~i~~~-~~~-~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 196 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWNK-TGA-LLNVLNFHRAPIVSVKWNKDGTHII-SMDVENVTILWNVISGTVMQHFELKETGGSS 196 (425)
T ss_dssp SSEEEEEETTSCEEEEET-TSC-EEEEECCCCSCEEEEEECTTSSEEE-EEETTCCEEEEETTTTEEEEEECCC------
T ss_pred CCEEEEEeCCCeEEEEeC-CCC-eeeeccCCCccEEEEEECCCCCEEE-EEecCCeEEEEECCCCcEEEEeeccccCccc
Confidence 999999999999999993 333 5778889999999999999988655 888899999999999887765542 2
Q ss_pred ------------eEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEE
Q 044075 637 ------------TVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWS 703 (786)
Q Consensus 637 ------------i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwD 703 (786)
+.+++|+++ ..+++++.++.|++||+++++.+..+..|...|.+++|+|++++|++++.| .|++||
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 197 INAENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp ---------CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred eeeccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 677889887 568899999999999999999999999999999999999999999999998 999999
Q ss_pred CCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcE
Q 044075 704 LASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSV 782 (786)
Q Consensus 704 l~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I 782 (786)
+++++.+..+..|...|.+++|+|++ ++++++.|+.|++||+.+++.+ .+..|...|.+++|+|++.+|++++.||.|
T Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 354 (425)
T 1r5m_A 276 GGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQV 354 (425)
T ss_dssp SSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeE
Confidence 99999999999999999999999999 9999999999999999998877 556789999999999999999999999999
Q ss_pred EEeC
Q 044075 783 KIWK 786 (786)
Q Consensus 783 ~IWd 786 (786)
+|||
T Consensus 355 ~i~~ 358 (425)
T 1r5m_A 355 NVYD 358 (425)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 34
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.1e-35 Score=318.48 Aligned_cols=242 Identities=19% Similarity=0.306 Sum_probs=212.4
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeee----cCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECT----PDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~----l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s 582 (786)
.|...|.+++|+|++ .|++|+.||+|+|||+.+++.+.. ..+|...|++|+|+|++++|++|+.|++|+|||+.+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 467789999999985 688999999999999998875543 358999999999999999999999999999999998
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-----CCeEEEEEeCCC-CEEEEEECCC
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-----GGTVQVRFQPRL-GLLLAAASEN 656 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-----~~i~~i~~sp~g-~~Ll~gs~dg 656 (786)
++ ++..+.+|...|.+++|++++..+|++|+.|+.|++||+++++....+. ..+.+++|+|++ .+|++++.|+
T Consensus 159 ~~-~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 159 QV-VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TE-EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred Cc-EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 76 6888999999999999999998888899999999999999988766543 357889999854 5788899999
Q ss_pred eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCC-CEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCC-EEE
Q 044075 657 VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNG-EYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYP-TLM 733 (786)
Q Consensus 657 ~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg-~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~-~L~ 733 (786)
.|++||+++++++..+.+|...|++++|+|++ ++|++|+.| +|+|||+.+++++ .+.+|...|.+++|+|++. +|+
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~lla 316 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLT 316 (344)
T ss_dssp EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEE
T ss_pred cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEE
Confidence 99999999999999999999999999999998 589999999 9999999998765 5678999999999999986 566
Q ss_pred EEECCCeEEEEECCCCeE
Q 044075 734 VIGGYQSLELWNMAENKC 751 (786)
Q Consensus 734 sgs~dg~I~IwDl~~~~~ 751 (786)
+++.|+.|++|++.+...
T Consensus 317 s~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 317 TVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEETTSCEEEEECCC---
T ss_pred EEcCCCeEEEEECCCCCC
Confidence 889999999999987543
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-34 Score=322.59 Aligned_cols=277 Identities=16% Similarity=0.237 Sum_probs=239.0
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc
Q 044075 506 RKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF 585 (786)
Q Consensus 506 ~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~ 585 (786)
..| ..+.+..|++++++|++|+.||.|+|||+.+++....+..|...|++++|+|++++|++++.|+.|++||+.+++
T Consensus 95 ~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~- 172 (420)
T 3vl1_A 95 KRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS- 172 (420)
T ss_dssp CSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-
T ss_pred ecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-
Confidence 344 445566789999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---------------------------CCeE
Q 044075 586 CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---------------------------GGTV 638 (786)
Q Consensus 586 ~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---------------------------~~i~ 638 (786)
.+..+.+|...|.+++|+|++..++ +++.|+.|++||+++++.+..+. ..+.
T Consensus 173 ~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~ 251 (420)
T 3vl1_A 173 NPRTLIGHRATVTDIAIIDRGRNVL-SASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKN 251 (420)
T ss_dssp CCEEEECCSSCEEEEEEETTTTEEE-EEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC
T ss_pred CceEEcCCCCcEEEEEEcCCCCEEE-EEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCccc
Confidence 5677889999999999999987655 89999999999999988776654 2233
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEe-cCCCCEEEEEEcCCCC-EEEEEeCC-eEEEEECCCCee-EEEEc
Q 044075 639 QVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFK-GHSTEIHSVCWDTNGE-YLASVSQD-SVRVWSLASGEC-IHELS 714 (786)
Q Consensus 639 ~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~-~h~~~I~sv~~spdg~-~Lasgs~D-~I~vwDl~s~~~-i~~l~ 714 (786)
+++|+|++.+|++++.|+.|++||+++++.+..+. .|...|.+++|+|++. +|++++.| .|++||+++++. +..+.
T Consensus 252 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~ 331 (420)
T 3vl1_A 252 NLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFL 331 (420)
T ss_dssp TTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE
T ss_pred ceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhh
Confidence 34567889999999999999999999998777765 4889999999999999 99999999 999999998754 66776
Q ss_pred c-CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC----------eEEEEcccCCCeEEEEEcCCCC---EEEEEeCCC
Q 044075 715 S-SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN----------KCMTIAAHDCVISALAQSPVTG---MVASASHDK 780 (786)
Q Consensus 715 ~-~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~----------~~~~~~~h~~~V~slafspdg~---~LaSgs~DG 780 (786)
. +...|.++.+ +++.+|++++.|+.|++||+... ....+..|...|.+++|+|++. .|++++.+|
T Consensus 332 ~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g 410 (420)
T 3vl1_A 332 INEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNN 410 (420)
T ss_dssp ESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTT
T ss_pred ccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCc
Confidence 6 5667777755 57789999999999999998762 2335678999999999999999 788888999
Q ss_pred cEEEeC
Q 044075 781 SVKIWK 786 (786)
Q Consensus 781 ~I~IWd 786 (786)
.+.+|+
T Consensus 411 ~~~~~~ 416 (420)
T 3vl1_A 411 FCALYN 416 (420)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 999995
No 36
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.1e-34 Score=306.45 Aligned_cols=268 Identities=19% Similarity=0.301 Sum_probs=233.6
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeee
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECT 546 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~ 546 (786)
++.....|+...++.+.. ..++..+..|...|.+++|+|++++|++|+.|+.|+|||+.+++.+..
T Consensus 27 ~l~s~~~dg~v~lWd~~~--------------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~ 92 (304)
T 2ynn_A 27 WVLTTLYSGRVELWNYET--------------QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD 92 (304)
T ss_dssp EEEEEETTSEEEEEETTT--------------TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEEcCCCcEEEEECCC--------------CceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEE
Confidence 445555677777776542 245678889999999999999999999999999999999999999999
Q ss_pred cCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC
Q 044075 547 PDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ 626 (786)
Q Consensus 547 l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~ 626 (786)
+.+|...|++++|+|++.+|++|+.|++|++||++++..+...+.+|...|.+++|+|.+..++++|+.|+.|++||++.
T Consensus 93 ~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 93 FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTC
T ss_pred EeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 99999999999999999999999999999999998876667788999999999999997767778999999999999987
Q ss_pred CeeeEee----cCCeEEEEEeC--CCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eE
Q 044075 627 YSCARIS----KGGTVQVRFQP--RLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SV 699 (786)
Q Consensus 627 ~~~~~~~----~~~i~~i~~sp--~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I 699 (786)
....... ...+..+.|++ ++.+|++++.|+.|++||+++++++..+.+|...|.+++|+|++.+|++++.| +|
T Consensus 173 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i 252 (304)
T 2ynn_A 173 STPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTL 252 (304)
T ss_dssp SSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred CCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeE
Confidence 6544332 25677888876 67899999999999999999999999999999999999999999999999999 99
Q ss_pred EEEECCCCeeEEEEccCCCceEEEEEeCCCC-EEEEEECCCeEEEEECCC
Q 044075 700 RVWSLASGECIHELSSSGNKFHSCIFHPSYP-TLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 700 ~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~-~L~sgs~dg~I~IwDl~~ 748 (786)
+|||+.+++++..+..+...+.+++|+|++. .+++++.++.+.+|++.+
T Consensus 253 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 253 KIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp EEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred EEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence 9999999999999999999999999999875 234444556688888765
No 37
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.5e-33 Score=318.60 Aligned_cols=279 Identities=19% Similarity=0.335 Sum_probs=247.4
Q ss_pred eeEEeecCCCCe-EEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 501 EVSSIRKSSSKV-TCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 501 ~v~~l~~H~~~V-~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
....+.+|.+.| .|+.| ++++|++|+.||.|+|||+.+++.+..+.+|...|++++|++++ +|++|+.||+|++||
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD 189 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence 456888999885 66666 46799999999999999999999999999999999999999988 999999999999999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecC-CCeEEEEEcCCCcEEEEeCCCCeee-----------------------EeecC
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPK-KNDLFCSCDGNSEIRFWNLSQYSCA-----------------------RISKG 635 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~-g~~ll~sgs~Dg~I~iwDl~~~~~~-----------------------~~~~~ 635 (786)
+++++ ....+.+|...|.+++|++. +..++++++.|+.|++||+.+.... ....+
T Consensus 190 ~~~~~-~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 190 IKKGC-CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp TTTTE-EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred CCCCc-EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 99876 67888899999999999963 3456779999999999999876532 12221
Q ss_pred C-eEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEE
Q 044075 636 G-TVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHEL 713 (786)
Q Consensus 636 ~-i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l 713 (786)
+ ....++++++..+++++.|+.|++||+++++.+..+.+|...|.+++|+|++.+|++++.| .|++||+++++++..+
T Consensus 269 ~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 348 (464)
T 3v7d_B 269 HMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL 348 (464)
T ss_dssp CSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 1 2233457889999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred ccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 714 SSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 714 ~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
..|...|.++.|+ +.+|++++.|+.|++||+.+........|...+..++|++++.+|++++ ||.|+|||
T Consensus 349 ~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd 418 (464)
T 3v7d_B 349 QGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYN 418 (464)
T ss_dssp CCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEE
T ss_pred eCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEE
Confidence 9999999999997 4799999999999999999988776667888899999999999999998 89999996
No 38
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-35 Score=328.66 Aligned_cols=284 Identities=15% Similarity=0.288 Sum_probs=235.9
Q ss_pred eeeeEEe-ecCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcCC---Ce---eeeecCCCCCCeEEEEEccCCCEEEEEe
Q 044075 499 FNEVSSI-RKSSSKVTCCHFSS-DGKLLASAGHDKKVVVWNMEN---FQ---TECTPDDHNHIITDVRFRPNSTQLATSS 570 (786)
Q Consensus 499 ~~~v~~l-~~H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t---~~---~~~~l~~h~~~V~sl~fspdg~~Lasgs 570 (786)
.+.+..+ .+|.+.|+|++|+| ++++||+|+.||.|+|||+.+ +. ....+ .|...|++++|+|++.+|++++
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s 130 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSS 130 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEe
Confidence 3567778 88999999999999 999999999999999999876 33 22333 5899999999999999999999
Q ss_pred CCCcEEEEcCC---CCcceeeeec----------C--CCCCeEEEE--EecCCCeEEEEEcCCCcEEEEeCCCCeeeEee
Q 044075 571 FDKTVRIWDAA---KPNFCLQTYT----------G--HNNHVMSLD--FHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS 633 (786)
Q Consensus 571 ~Dg~I~VWdl~---s~~~~~~~~~----------~--h~~~V~sl~--~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~ 633 (786)
.||+|++||++ ++. ....+. . +...+.++. +++++. ++++++.|+.|++||+++.+++..+
T Consensus 131 ~dg~i~vwd~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~ 208 (437)
T 3gre_A 131 KDGQIIVLKVNHYQQES-EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTLERLQII 208 (437)
T ss_dssp TTSEEEEEEEEEEEETT-EEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEEeccccCCc-eeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCeeeEEE
Confidence 99999999995 332 222222 1 556677777 345554 5668999999999999998876654
Q ss_pred c-----CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEe-cCCCCEEEEEEcC----CCCEEEEEeCC-eEEEE
Q 044075 634 K-----GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFK-GHSTEIHSVCWDT----NGEYLASVSQD-SVRVW 702 (786)
Q Consensus 634 ~-----~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~-~h~~~I~sv~~sp----dg~~Lasgs~D-~I~vw 702 (786)
. ..+.+++|+|++.+|++++.|+.|++||+++++++..+. .|...|.+++|+| ++.+|++++.| .|+||
T Consensus 209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iw 288 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIW 288 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEE
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEE
Confidence 3 678999999999999999999999999999999999886 6888999996664 67799999999 89999
Q ss_pred ECCCCeeEEEEccC--------------------------CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEc
Q 044075 703 SLASGECIHELSSS--------------------------GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIA 755 (786)
Q Consensus 703 Dl~s~~~i~~l~~~--------------------------~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~ 755 (786)
|+++++++..+..| ...|.+++|+ ++.+|++++.|+.|++||+.+++.. .+.
T Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 289 NFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp ETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred EcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEe
Confidence 99999988887644 3457888999 7789999999999999999887533 122
Q ss_pred -------------------------------------ccCCCeEEEEEcCC--CCEEEEEeCCCcEEEeC
Q 044075 756 -------------------------------------AHDCVISALAQSPV--TGMVASASHDKSVKIWK 786 (786)
Q Consensus 756 -------------------------------------~h~~~V~slafspd--g~~LaSgs~DG~I~IWd 786 (786)
.|...|++++|+++ +.+|++|+.||.|+||+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 368 SPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 28999999999998 77999999999999996
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.4e-36 Score=327.38 Aligned_cols=279 Identities=16% Similarity=0.205 Sum_probs=228.3
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC--eeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC
Q 044075 505 IRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF--QTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 505 l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~--~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s 582 (786)
...|.+.|+|++|+|++++||+|+.|+.|+|||+.++ +.+..+.+|...|++++|+|++++|++++.|++|+|||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 3447789999999999999999999999999999988 78888999999999999999999999999999999999988
Q ss_pred Cc--ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee---eEe----ecCCeEEEEEeCCCCEEEEEE
Q 044075 583 PN--FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC---ARI----SKGGTVQVRFQPRLGLLLAAA 653 (786)
Q Consensus 583 ~~--~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~---~~~----~~~~i~~i~~sp~g~~Ll~gs 653 (786)
+. .....+..|...|.+++|+|++..++ +++.|+.|++||++..+. ... +...+.+++|+|++.+|++++
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFA-VGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCE-EEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEE-EEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 65 23556778999999999999887655 888899999999987652 222 456789999999999999999
Q ss_pred CCCeEEEEEcC------------------CCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCee----E
Q 044075 654 SENVVSIFDVE------------------TDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGEC----I 710 (786)
Q Consensus 654 ~dg~I~iwD~~------------------t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~----i 710 (786)
.|+.|++||++ .++++..+ +|...|.+++|+|++++|++++.| .|++||+.++++ +
T Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred CCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceee
Confidence 99999999985 34566666 899999999999999999999999 999999999887 7
Q ss_pred EEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeE-------------------------------------E-
Q 044075 711 HELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKC-------------------------------------M- 752 (786)
Q Consensus 711 ~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~-------------------------------------~- 752 (786)
..+..|...|.+++|+|++.+|++++.++. .+|+...... .
T Consensus 245 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (377)
T 3dwl_C 245 ITVKLSQLPLRSLLWANESAIVAAGYNYSP-ILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRST 323 (377)
T ss_dssp CCEECSSSCEEEEEEEETTEEEEEESSSSE-EEECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC------------
T ss_pred EeecCCCCceEEEEEcCCCCEEEEEcCCcE-EEEEeCCCceEEEeeeccccccccccccccccccccccccccccccccc
Confidence 888899999999999999998877765554 4776652110 0
Q ss_pred ---------------EEcccCCCeEEEEEcCCCC----EEEEEeCCCcEEEeC
Q 044075 753 ---------------TIAAHDCVISALAQSPVTG----MVASASHDKSVKIWK 786 (786)
Q Consensus 753 ---------------~~~~h~~~V~slafspdg~----~LaSgs~DG~I~IWd 786 (786)
....|...|+++++.+... .|+||+.||.|+|||
T Consensus 324 ~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWd 376 (377)
T 3dwl_C 324 FRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWT 376 (377)
T ss_dssp -------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEEC
T ss_pred ccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEec
Confidence 0012999999999766443 699999999999997
No 40
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-35 Score=327.21 Aligned_cols=276 Identities=17% Similarity=0.312 Sum_probs=243.8
Q ss_pred CCeEEEEEcCCCC-EEEEE----------ECCCeEEEEEcCCCe---eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcE
Q 044075 510 SKVTCCHFSSDGK-LLASA----------GHDKKVVVWNMENFQ---TECTPDDHNHIITDVRFRPNSTQLATSSFDKTV 575 (786)
Q Consensus 510 ~~V~~lafSpdg~-~Lasg----------s~Dg~V~IWdl~t~~---~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I 575 (786)
..|.|++|+|+++ +|++| +.|+.|+|||+.++. .+.. ..|...|++++|+|++.+|++++.||.|
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS-LQVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC-CCCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE-EecCCceEEEEECCCCCeEEEEccCCeE
Confidence 3688999999987 99999 889999999999875 3333 3688999999999999999999999999
Q ss_pred EEEcCCC---CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe------eeE------eecCCeEEE
Q 044075 576 RIWDAAK---PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS------CAR------ISKGGTVQV 640 (786)
Q Consensus 576 ~VWdl~s---~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~------~~~------~~~~~i~~i 640 (786)
++||+.+ +......+.+|...|.+++|+|++..++++++.|+.|++||+.+.+ ... .+...+.++
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISL 171 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEE
T ss_pred EEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEE
Confidence 9999987 2336778889999999999999956677799999999999998875 222 234678999
Q ss_pred EEeCC-CCEEEEEECCCeEEEEEcCCCcEEEEEecC------CCCEEEEEEcCCC-CEEEEEeCC----eEEEEECCCC-
Q 044075 641 RFQPR-LGLLLAAASENVVSIFDVETDRLTHSFKGH------STEIHSVCWDTNG-EYLASVSQD----SVRVWSLASG- 707 (786)
Q Consensus 641 ~~sp~-g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h------~~~I~sv~~spdg-~~Lasgs~D----~I~vwDl~s~- 707 (786)
+|+|+ +..|++++.|+.|++||+++++.+..+..| ...|.+++|+|++ .+|++++.| .|++||++++
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC
Confidence 99999 789999999999999999999999988876 7899999999997 688888887 8999999986
Q ss_pred eeEEEEc-cCCCceEEEEEeC-CCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCC-CEEEEEeCCCcEE
Q 044075 708 ECIHELS-SSGNKFHSCIFHP-SYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVT-GMVASASHDKSVK 783 (786)
Q Consensus 708 ~~i~~l~-~~~~~I~sv~fsp-dg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg-~~LaSgs~DG~I~ 783 (786)
.++..+. .|...|.+++|+| ++.+|++++.|+.|++||+.+++.+ .+..|...|++++|+|++ .+|++++.||.|+
T Consensus 252 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 252 TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 6777777 8999999999999 8999999999999999999998776 567899999999999999 8999999999999
Q ss_pred EeC
Q 044075 784 IWK 786 (786)
Q Consensus 784 IWd 786 (786)
|||
T Consensus 332 iw~ 334 (416)
T 2pm9_A 332 VQT 334 (416)
T ss_dssp EEE
T ss_pred EEE
Confidence 996
No 41
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.8e-33 Score=303.81 Aligned_cols=272 Identities=19% Similarity=0.309 Sum_probs=235.5
Q ss_pred eeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee
Q 044075 466 SFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC 545 (786)
Q Consensus 466 ~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~ 545 (786)
.++.....|+...++.+.... .....++..+.+|...|.+++|+|++++|++|+.|++|+|||+.+++.+.
T Consensus 31 ~~l~s~s~D~~v~~W~~~~~~---------~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~ 101 (319)
T 3frx_A 31 NLLLSASRDKTLISWKLTGDD---------QKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ 101 (319)
T ss_dssp TEEEEEETTSEEEEEEEEEET---------TEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred cEEEEecCCccEEEecCCCCC---------ccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeE
Confidence 455566667777777654211 11124577899999999999999999999999999999999999999999
Q ss_pred ecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCC-----eEEEEEcCCCcEE
Q 044075 546 TPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKN-----DLFCSCDGNSEIR 620 (786)
Q Consensus 546 ~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~-----~ll~sgs~Dg~I~ 620 (786)
.+.+|...|.+++|+|++.+|++|+.|++|++||++.. ++..+.+|...|.++.|.|... .++++++.|+.|+
T Consensus 102 ~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 179 (319)
T 3frx_A 102 RFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ--CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVK 179 (319)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC--EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEE
T ss_pred EEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEE
Confidence 99999999999999999999999999999999999743 5778889999999999998643 3677999999999
Q ss_pred EEeCCCCeeeEee---cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC
Q 044075 621 FWNLSQYSCARIS---KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD 697 (786)
Q Consensus 621 iwDl~~~~~~~~~---~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D 697 (786)
+||+++.+....+ ...+.+++|+|++.+|++++.|+.|++||+++++.+..+.. ...|.+++|+|++.+|++++.+
T Consensus 180 ~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~~~ 258 (319)
T 3frx_A 180 AWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWLAAATAT 258 (319)
T ss_dssp EEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEEEEEETT
T ss_pred EEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEEEEEcCC
Confidence 9999988776554 46789999999999999999999999999999999988884 5689999999999999999988
Q ss_pred eEEEEECCCCeeEEEEcc--------CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC
Q 044075 698 SVRVWSLASGECIHELSS--------SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 698 ~I~vwDl~s~~~i~~l~~--------~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~ 749 (786)
.+++|++.....+..+.. +...+.+++|+|++++|++++.|+.|+|||+.+.
T Consensus 259 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 259 GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 999999998887777653 3567899999999999999999999999998653
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.1e-34 Score=307.11 Aligned_cols=276 Identities=16% Similarity=0.290 Sum_probs=244.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce-
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC- 586 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~- 586 (786)
|.+.|.+++|+|||++++++..++.+.+|.............|...|++++|+|++++|++++ ||.|++||+.++...
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 556799999999999999998888888887666555555568999999999999999999999 999999999876522
Q ss_pred -eeeec--CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe--eeEe---ecCCeEEEEEeCCCCEEEEEECCCeE
Q 044075 587 -LQTYT--GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS--CARI---SKGGTVQVRFQPRLGLLLAAASENVV 658 (786)
Q Consensus 587 -~~~~~--~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~--~~~~---~~~~i~~i~~sp~g~~Ll~gs~dg~I 658 (786)
...+. .|...|.+++|+|++..++ +++.|+.|++||+.+.+ .... +...+.+++|+|++.++++++.|+.|
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v 165 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLI-VGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEE-EEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEE-EEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 22222 7899999999999887555 88889999999999876 3322 23568899999999999999999999
Q ss_pred EEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEEC
Q 044075 659 SIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGG 737 (786)
Q Consensus 659 ~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~ 737 (786)
++||+++++.+..+..|...|.+++|+|++.+|++++.| .|++||+++++.+..+. +...+.+++|+|++.+|++++.
T Consensus 166 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 166 AVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcC
Confidence 999999999999999999999999999999999999999 99999999999887774 6788999999999999999999
Q ss_pred CCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 738 YQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 738 dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
++.|++||+.+++...+..|...|.+++|+|++++|++++.||.|++||
T Consensus 245 ~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 293 (337)
T 1gxr_A 245 SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWR 293 (337)
T ss_dssp TSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEE
Confidence 9999999999999989999999999999999999999999999999996
No 43
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4e-34 Score=320.32 Aligned_cols=275 Identities=19% Similarity=0.332 Sum_probs=232.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe-----------eeeecCCCC------------CCeEEEEEccCC-
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ-----------TECTPDDHN------------HIITDVRFRPNS- 563 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~-----------~~~~l~~h~------------~~V~sl~fspdg- 563 (786)
|.+.|+||+|+|+|++||+|+.||.|+|||+.+++ ....+.+|. ..|++++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 67899999999999999999999999999999876 577888998 889999999998
Q ss_pred -CEEEEEeCCCcEEEEcCCCCcce--------------------------------------e-eeecCCCCCeEEEEEe
Q 044075 564 -TQLATSSFDKTVRIWDAAKPNFC--------------------------------------L-QTYTGHNNHVMSLDFH 603 (786)
Q Consensus 564 -~~Lasgs~Dg~I~VWdl~s~~~~--------------------------------------~-~~~~~h~~~V~sl~~s 603 (786)
.+|++++.|++|++||+.+.... . ....+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 79999999999999998763321 1 1246799999999999
Q ss_pred cCCCeEEEEEcCCCcEEEEeCCC-CeeeE----------eecCCeEEEEEeCCC-CEEEEEECCCeEEEEEcCCCcE---
Q 044075 604 PKKNDLFCSCDGNSEIRFWNLSQ-YSCAR----------ISKGGTVQVRFQPRL-GLLLAAASENVVSIFDVETDRL--- 668 (786)
Q Consensus 604 p~g~~ll~sgs~Dg~I~iwDl~~-~~~~~----------~~~~~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t~~~--- 668 (786)
|++..++ +| .|+.|++||++. ..... .+...+.+++|+|++ ..|++++.|+.|++||+++++.
T Consensus 187 ~~~~~l~-s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 187 SDYETYL-SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp TTSSEEE-EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred CCCCEEE-Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9887655 67 699999999994 44443 234678999999998 9999999999999999999876
Q ss_pred -EEEEecCCC------------CEEEEEEcCCCCEEEEEeCCeEEEEECCC-CeeEEEEccCCCc---------------
Q 044075 669 -THSFKGHST------------EIHSVCWDTNGEYLASVSQDSVRVWSLAS-GECIHELSSSGNK--------------- 719 (786)
Q Consensus 669 -i~~l~~h~~------------~I~sv~~spdg~~Lasgs~D~I~vwDl~s-~~~i~~l~~~~~~--------------- 719 (786)
+..+..|.. .|.+++|+|++++|++++.+.|+|||+++ ++++..+..|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence 788888876 89999999999999999888999999997 8888888777432
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEccc---------------------------------CCCeEEEEE
Q 044075 720 FHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAH---------------------------------DCVISALAQ 766 (786)
Q Consensus 720 I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h---------------------------------~~~V~slaf 766 (786)
+..++|+|++.+|++++.|+.|++||+.+++.+.+..| ...|.+++|
T Consensus 345 ~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 424 (447)
T 3dw8_B 345 KFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAW 424 (447)
T ss_dssp CCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEE
T ss_pred ceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEE
Confidence 33489999999999999999999999999988765443 456899999
Q ss_pred cCCCCEEEEEeCCCcEEEe
Q 044075 767 SPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 767 spdg~~LaSgs~DG~I~IW 785 (786)
+|++++||+++.++ +.||
T Consensus 425 ~p~~~~la~~~~~~-~~~~ 442 (447)
T 3dw8_B 425 HPKENIIAVATTNN-LYIF 442 (447)
T ss_dssp CSSSSEEEEECSSC-EEEE
T ss_pred CCCCCEEEEEecce-eeee
Confidence 99999999998886 6555
No 44
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.2e-33 Score=303.46 Aligned_cols=262 Identities=22% Similarity=0.363 Sum_probs=230.6
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC----e
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF----Q 542 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~----~ 542 (786)
++.....|+...++.... .+.+..+..|...|.+++|+|++++|++|+.|+.|+||++.+. .
T Consensus 69 ~l~s~s~Dg~v~iWd~~~--------------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~ 134 (340)
T 1got_B 69 LLLSASQDGKLIIWDSYT--------------TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVR 134 (340)
T ss_dssp EEEEEETTTEEEEEETTT--------------CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCE
T ss_pred EEEEEeCCCcEEEEECCC--------------CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcce
Confidence 444555667777775432 2456678889999999999999999999999999999999865 4
Q ss_pred eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEE
Q 044075 543 TECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFW 622 (786)
Q Consensus 543 ~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iw 622 (786)
....+.+|...|.++.|++++ .|++++.|++|++||+.++. .+..+.+|...|.+++|+|++. ++++++.|+.|++|
T Consensus 135 ~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~w 211 (340)
T 1got_B 135 VSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLW 211 (340)
T ss_dssp EEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEE
T ss_pred eEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCc-EEEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEE
Confidence 566778999999999999877 48999999999999999876 5778889999999999999877 55599999999999
Q ss_pred eCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec--CCCCEEEEEEcCCCCEEEEEeCC
Q 044075 623 NLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG--HSTEIHSVCWDTNGEYLASVSQD 697 (786)
Q Consensus 623 Dl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~--h~~~I~sv~~spdg~~Lasgs~D 697 (786)
|++++.+...+. ..+.+++|+|++.+|++++.|+.|++||+++++.+..+.. +...|.+++|+|++.+|++++.|
T Consensus 212 d~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 212 DVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp ETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCC
Confidence 999988776554 5789999999999999999999999999999988777653 33579999999999999999999
Q ss_pred -eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEE
Q 044075 698 -SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWN 745 (786)
Q Consensus 698 -~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwD 745 (786)
.|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|+.|+|||
T Consensus 292 ~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 292 FNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999999999999999999999999999996
No 45
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.7e-34 Score=325.22 Aligned_cols=283 Identities=20% Similarity=0.282 Sum_probs=229.3
Q ss_pred eeEEeecCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcCCCee--eeecCCCCCCeEEEEEcc-CCCEEEEEeCCCcEE
Q 044075 501 EVSSIRKSSSKVTCCHFSS-DGKLLASAGHDKKVVVWNMENFQT--ECTPDDHNHIITDVRFRP-NSTQLATSSFDKTVR 576 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t~~~--~~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~ 576 (786)
......+|...|+||+|+| ++.+||+|+.||.|+|||+.+.+. ...+.+|.+.|++|+|+| ++.+|++|+.||+|+
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 3445677999999999999 677999999999999999987654 445678999999999998 688999999999999
Q ss_pred EEcCCCCcceeeeec--CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee--EeecCCeEEEEEeCCCC-EEEE
Q 044075 577 IWDAAKPNFCLQTYT--GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA--RISKGGTVQVRFQPRLG-LLLA 651 (786)
Q Consensus 577 VWdl~s~~~~~~~~~--~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~--~~~~~~i~~i~~sp~g~-~Ll~ 651 (786)
|||+++.. ...... .+...+.+++|+|++..+ ++|+.||.|++||++..... ..+...+.+++|+|++. .|++
T Consensus 191 iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l-~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 191 LQDFKGNI-LRVFASSDTINIWFCSLDVSASSRMV-VTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp EEETTSCE-EEEEECCSSCSCCCCCEEEETTTTEE-EEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred EeeccCCc-eeEEeccCCCCccEEEEEECCCCCEE-EEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEE
Confidence 99998654 222222 334567899999988754 58999999999999764432 23457899999999886 6778
Q ss_pred EECCCeEEEEEcCCCcEEEE---EecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCC------ceE
Q 044075 652 AASENVVSIFDVETDRLTHS---FKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGN------KFH 721 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~---l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~------~I~ 721 (786)
++.|+.|++||+++.+.... ..+|...|++++|+|++.+|++++.| .|+|||+.++++...+..|.. .+.
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 348 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI 348 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeE
Confidence 89999999999988754332 34699999999999999999999999 999999999988887766543 234
Q ss_pred EEEEeCCCCEEEEEEC------------CCeEEEEECCCCeEEEE--cccCCCeEEE-EEcCCCCEEEEEeCCCcEEEeC
Q 044075 722 SCIFHPSYPTLMVIGG------------YQSLELWNMAENKCMTI--AAHDCVISAL-AQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 722 sv~fspdg~~L~sgs~------------dg~I~IwDl~~~~~~~~--~~h~~~V~sl-afspdg~~LaSgs~DG~I~IWd 786 (786)
.+.|+|++.+++++.. ++.|++||..+++++.. ..|...|.++ +|+|++.+|++|+ |+.|+|||
T Consensus 349 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~ 427 (435)
T 4e54_B 349 KAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWS 427 (435)
T ss_dssp BCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECC
T ss_pred EEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEE
Confidence 5678888877777653 24799999999987743 3688889887 6999999999876 88999997
No 46
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.4e-34 Score=306.07 Aligned_cols=271 Identities=15% Similarity=0.125 Sum_probs=237.5
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe---eeeecCCCCCCeEEEEEccCCC-EEEEEeCCCcEEEE
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ---TECTPDDHNHIITDVRFRPNST-QLATSSFDKTVRIW 578 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~---~~~~l~~h~~~V~sl~fspdg~-~Lasgs~Dg~I~VW 578 (786)
....+|.+.|++++|+|++++|++++.|+.|+||++.+++ ....+..|...|++++|+|+++ +|++++.||.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 3455899999999999999999999999999999998876 3445568999999999999999 99999999999999
Q ss_pred cC-CCCcceeeeecC--CCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC---------CeeeEe--ecCCeEEEEEeC
Q 044075 579 DA-AKPNFCLQTYTG--HNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ---------YSCARI--SKGGTVQVRFQP 644 (786)
Q Consensus 579 dl-~s~~~~~~~~~~--h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~---------~~~~~~--~~~~i~~i~~sp 644 (786)
|+ .++. ...+.+ |...|.+++|+| +. ++++++.|+.|++||+++ .+++.. +...+.+++|++
T Consensus 85 d~~~~~~--~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 160 (342)
T 1yfq_A 85 DLIGSPS--FQALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNS 160 (342)
T ss_dssp CSSSSSS--EEECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECS
T ss_pred EeccCCc--eEeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecC
Confidence 99 7765 467778 999999999999 55 556899999999999886 554333 446789999998
Q ss_pred CCCEEEEEECCCeEEEEEcCC-Cc--EEEEEecCCCCEEEEEEcC-CCCEEEEEeCC-eEEEEECCCC------eeEEEE
Q 044075 645 RLGLLLAAASENVVSIFDVET-DR--LTHSFKGHSTEIHSVCWDT-NGEYLASVSQD-SVRVWSLASG------ECIHEL 713 (786)
Q Consensus 645 ~g~~Ll~gs~dg~I~iwD~~t-~~--~i~~l~~h~~~I~sv~~sp-dg~~Lasgs~D-~I~vwDl~s~------~~i~~l 713 (786)
++ +++++.++.|++||+++ +. .......|...|.+++|+| ++.+|++++.| .|++||++.. +.+..+
T Consensus 161 ~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 238 (342)
T 1yfq_A 161 SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence 87 99999999999999998 53 3444556889999999999 99999999999 9999999887 777888
Q ss_pred ccCCC---------ceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEccc-CCCeEEEEEcCCCCEEEEEeCCCc
Q 044075 714 SSSGN---------KFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAH-DCVISALAQSPVTGMVASASHDKS 781 (786)
Q Consensus 714 ~~~~~---------~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h-~~~V~slafspdg~~LaSgs~DG~ 781 (786)
..|.. .|.+++|+|++++|++++.||.|++||+.+++.+ .+..| ...|++++ |++.+|++++.||.
T Consensus 239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 88755 9999999999999999999999999999998876 55677 99999999 99999999999998
No 47
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3e-33 Score=311.30 Aligned_cols=277 Identities=18% Similarity=0.326 Sum_probs=239.5
Q ss_pred EEeecCCCCe--EEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCC-CCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 503 SSIRKSSSKV--TCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDD-HNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 503 ~~l~~H~~~V--~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~-h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
....+|.+.+ .+++|++ ..+++++.|+.|+|||+.+++....+.. |...|++++|+|++++|++|+.||.|++||
T Consensus 85 ~~~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd 162 (401)
T 4aez_A 85 LDAPGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYD 162 (401)
T ss_dssp EECTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeCCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEE
Confidence 3444676654 4566664 5678888999999999999988877765 889999999999999999999999999999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC-CeeeE---eecCCeEEEEEeCCCCEEEEEECC
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ-YSCAR---ISKGGTVQVRFQPRLGLLLAAASE 655 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~-~~~~~---~~~~~i~~i~~sp~g~~Ll~gs~d 655 (786)
+.+++ .+..+.+|...|.+++|++ .++++++.||.|++||++. ..... .+...+.+++|+|++.+|++++.|
T Consensus 163 ~~~~~-~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 238 (401)
T 4aez_A 163 VESQT-KLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND 238 (401)
T ss_dssp TTTCC-EEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CcCCe-EEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC
Confidence 99876 5778889999999999953 3677999999999999984 33333 345778999999999999999999
Q ss_pred CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCC-EEEEEe--CC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCE
Q 044075 656 NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGE-YLASVS--QD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPT 731 (786)
Q Consensus 656 g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~-~Lasgs--~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~ 731 (786)
+.|++||+++++.+..+..|...|.+++|+|++. ++++++ .| .|++||+.+++++..+. +...|.+++|+|++++
T Consensus 239 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~ 317 (401)
T 4aez_A 239 NVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKE 317 (401)
T ss_dssp SCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSE
T ss_pred CeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCe
Confidence 9999999999999999999999999999999764 556654 46 99999999999998885 5678999999999999
Q ss_pred EEEEE--CCCeEEEEECCCCeEE---EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 732 LMVIG--GYQSLELWNMAENKCM---TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 732 L~sgs--~dg~I~IwDl~~~~~~---~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|++++ .|+.|++||+.++... .+.+|...|.+++|+|++.+|++++.||.|+|||
T Consensus 318 l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 318 IMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWR 377 (401)
T ss_dssp EEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEE
T ss_pred EEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 99965 7999999999987654 4568999999999999999999999999999996
No 48
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=306.56 Aligned_cols=285 Identities=16% Similarity=0.229 Sum_probs=239.3
Q ss_pred eeeeeEEeecCCCCeEEEEEcCC---CCEEEEEECCCeEEEEEcCC-Ceee-eecCCCCCCeEEEEEccCCCEEEEEeCC
Q 044075 498 SFNEVSSIRKSSSKVTCCHFSSD---GKLLASAGHDKKVVVWNMEN-FQTE-CTPDDHNHIITDVRFRPNSTQLATSSFD 572 (786)
Q Consensus 498 ~~~~v~~l~~H~~~V~~lafSpd---g~~Lasgs~Dg~V~IWdl~t-~~~~-~~l~~h~~~V~sl~fspdg~~Lasgs~D 572 (786)
.++.+..+.+|.+.|+|++|+|+ |++|++|+.||.|+|||+.+ +..+ ..+..|...|++++|+|++++|++++.|
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 44567788999999999999999 69999999999999999997 4444 7788999999999999999999999999
Q ss_pred CcEEEEcCCCCcceeeeecCCCCCeEEEEE--ecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEE
Q 044075 573 KTVRIWDAAKPNFCLQTYTGHNNHVMSLDF--HPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLL 650 (786)
Q Consensus 573 g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~--sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll 650 (786)
|.|++||+.++. ...+..|...|.+++| +|++. ++++++.|+.|++||+++.+.+..+......+++......++
T Consensus 108 g~v~iwd~~~~~--~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (368)
T 3mmy_A 108 KTAKMWDLSSNQ--AIQIAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAV 184 (368)
T ss_dssp SEEEEEETTTTE--EEEEEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEE
T ss_pred CcEEEEEcCCCC--ceeeccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeE
Confidence 999999999876 3346679999999999 66655 555899999999999999887777665545555555567899
Q ss_pred EEECCCeEEEEEcCCCcEEEEEe--cCCCCEEEEEEcCCCCE----EEEEeCC-eEEEEECCCC---eeEEEEccCCC--
Q 044075 651 AAASENVVSIFDVETDRLTHSFK--GHSTEIHSVCWDTNGEY----LASVSQD-SVRVWSLASG---ECIHELSSSGN-- 718 (786)
Q Consensus 651 ~gs~dg~I~iwD~~t~~~i~~l~--~h~~~I~sv~~spdg~~----Lasgs~D-~I~vwDl~s~---~~i~~l~~~~~-- 718 (786)
+++.++.+.+||++......... .+...+.++++.++... +++++.| .|++||++.. ..+..+..|..
T Consensus 185 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 264 (368)
T 3mmy_A 185 VATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNG 264 (368)
T ss_dssp EEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC-
T ss_pred EEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccc
Confidence 99999999999999875443332 24566777777666554 9999999 9999999987 56677777755
Q ss_pred ----------ceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 719 ----------KFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 719 ----------~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
.|.+++|+|++.+|++++.||.|++||+.+++++ .+..|...|++++|+|++.+|++++.|+..+.|
T Consensus 265 ~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 265 TNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGH 342 (368)
T ss_dssp ---CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCG
T ss_pred ccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccc
Confidence 7999999999999999999999999999998876 566899999999999999999999999865444
No 49
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.3e-34 Score=312.32 Aligned_cols=244 Identities=18% Similarity=0.330 Sum_probs=209.0
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee----ecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC----TPDDHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~----~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
....+|...|++++|+|++.+ ++++.||+|+|||+.+++... ...+|...|++|+|+|++++|++|+.|++|+||
T Consensus 88 ~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWVSEKGI-LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp SEEEECSSCEEEEEEETTTEE-EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred cccCCCCCCEEEEEEcCCCCE-EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 345679999999999999864 567789999999998876543 335899999999999999999999999999999
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-----CCeEEEEEeCCC-CEEEEE
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-----GGTVQVRFQPRL-GLLLAA 652 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-----~~i~~i~~sp~g-~~Ll~g 652 (786)
|+.+++ ++..+.+|...|.+++|++++..++++++.|+.|++||+++++...... ..+.+++|+|++ .+|+++
T Consensus 167 d~~~~~-~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 167 DLSQKA-VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp ETTTTE-EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEE
T ss_pred ECCCCc-EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEe
Confidence 999876 6788899999999999999998888899999999999999877655432 457899999975 578889
Q ss_pred ECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCC-CEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeC-CC
Q 044075 653 ASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNG-EYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHP-SY 729 (786)
Q Consensus 653 s~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg-~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fsp-dg 729 (786)
+.|+.|++||+++++.+..+.+|...|++++|+|++ ++|++++.| +|+|||+++++++..+ .|...|++++|+| ++
T Consensus 246 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~ 324 (357)
T 4g56_B 246 DETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDH 324 (357)
T ss_dssp ESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSST
T ss_pred ecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCC
Confidence 999999999999999999999999999999999987 679999999 9999999999888665 7899999999998 78
Q ss_pred CEEEEEECCCeEEEEECCCC
Q 044075 730 PTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 730 ~~L~sgs~dg~I~IwDl~~~ 749 (786)
.+|++++.|+.|++||+...
T Consensus 325 ~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 325 SKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp TEEEEEETTSCEEEEECC--
T ss_pred CEEEEEcCCCeEEEEECCCC
Confidence 99999999999999999754
No 50
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.5e-33 Score=338.81 Aligned_cols=285 Identities=15% Similarity=0.302 Sum_probs=255.6
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
++..+.+.+|.+.|+|++|+|++++||+|+.||.|+|||+.+++.+..+..|...|++++|+|++++|++++.||.|+||
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred cccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC-eeeEe---ecCCeEEEEEeC-CCCEEEEEE
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY-SCARI---SKGGTVQVRFQP-RLGLLLAAA 653 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~-~~~~~---~~~~i~~i~~sp-~g~~Ll~gs 653 (786)
|+.+++ .+..+.+|...|.+++|+|++..++ +++.||.|++||+.+. ..... +...+.+++|+| ++..|++++
T Consensus 83 ~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 83 NYNTGE-KVVDFEAHPDYIRSIAVHPTKPYVL-SGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp ETTTCC-EEEEEECCSSCEEEEEECSSSSEEE-EEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred ECCCCc-EEEEEecCCCCEEEEEEeCCCCEEE-EEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence 999877 5777889999999999999988655 8889999999999876 44433 346789999999 888999999
Q ss_pred CCCeEEEEEcCCCcEEEEEecCC-CCEEEEEEcC--CCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCC
Q 044075 654 SENVVSIFDVETDRLTHSFKGHS-TEIHSVCWDT--NGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSY 729 (786)
Q Consensus 654 ~dg~I~iwD~~t~~~i~~l~~h~-~~I~sv~~sp--dg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg 729 (786)
.|+.|++||++++.....+..+. ..|.+++|+| ++.+|++++.| .|++||+.+++++..+..|...|.+++|+|++
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 240 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS
T ss_pred CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 99999999999887777776554 8899999999 99999999999 99999999999999999999999999999999
Q ss_pred CEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCC--EEEEEeCCCcEEEeC
Q 044075 730 PTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTG--MVASASHDKSVKIWK 786 (786)
Q Consensus 730 ~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~--~LaSgs~DG~I~IWd 786 (786)
.+|++++.||.|++||+.+++.. .+..|...|++++|+|++. ++++++ |+.+.+|+
T Consensus 241 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~ 299 (814)
T 3mkq_A 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLS 299 (814)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE-TTEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe-CCCEEEEE
Confidence 99999999999999999988766 5667889999999999987 455555 55566663
No 51
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.4e-33 Score=310.23 Aligned_cols=269 Identities=21% Similarity=0.395 Sum_probs=233.0
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec--CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceee
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP--DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQ 588 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l--~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~ 588 (786)
.+++|+||++ ++||+|. |++|+|||+.+++....+ .+|...|++|+|+|++++|++|+.||+|+|||+.+++ ++.
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~-~~~ 183 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK-RLR 183 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc-EEE
Confidence 4678999986 4788775 999999999999887665 5678899999999999999999999999999999876 678
Q ss_pred eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee-e---EeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcC
Q 044075 589 TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC-A---RISKGGTVQVRFQPRLGLLLAAASENVVSIFDVE 664 (786)
Q Consensus 589 ~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~-~---~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~ 664 (786)
.+.+|...|.++++++ .++++++.|+.+++||...... + ..+...+..+.+++++.++++++.|+.|++||..
T Consensus 184 ~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 184 NMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 8899999999999873 4677999999999999886433 2 2344678889999999999999999999999998
Q ss_pred CCc----EEEEEecCCCCEEEEEEcCCCC-EEEEE--eCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEE
Q 044075 665 TDR----LTHSFKGHSTEIHSVCWDTNGE-YLASV--SQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 665 t~~----~i~~l~~h~~~I~sv~~spdg~-~Lasg--s~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
+++ .+.....|...|.+++|+|++. +++++ +.| +|++||+.+++++..+..+ ..+.++.|++++..+++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGH 339 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEE
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEE
Confidence 764 3556777999999999999654 55554 456 9999999999999888755 6789999999999999877
Q ss_pred --CCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 737 --GYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 737 --~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.|+.|+|||+.+++++ .+.+|.+.|++|+|+||+.+|+||+.||+|+|||
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWd 392 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 392 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 5899999999998876 6779999999999999999999999999999997
No 52
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.8e-33 Score=297.13 Aligned_cols=246 Identities=20% Similarity=0.320 Sum_probs=210.8
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC--CeeeeecCCCCCCeEEEEEcc--CCCEEEEEeCCCcEEEE
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN--FQTECTPDDHNHIITDVRFRP--NSTQLATSSFDKTVRIW 578 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t--~~~~~~l~~h~~~V~sl~fsp--dg~~Lasgs~Dg~I~VW 578 (786)
..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.+ .+.+.++.+|...|++++|++ ++++|++|+.|++|+||
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 45778999999999999999999999999999999974 467788999999999999986 48899999999999999
Q ss_pred cCCCCc-ceeeeecCCCCCeEEEEEecCC-CeEEEEEcCCCcEEEEeCCCCe-----eeEeecCCeEEEEEeCC------
Q 044075 579 DAAKPN-FCLQTYTGHNNHVMSLDFHPKK-NDLFCSCDGNSEIRFWNLSQYS-----CARISKGGTVQVRFQPR------ 645 (786)
Q Consensus 579 dl~s~~-~~~~~~~~h~~~V~sl~~sp~g-~~ll~sgs~Dg~I~iwDl~~~~-----~~~~~~~~i~~i~~sp~------ 645 (786)
|++++. ..+..+.+|...|.+++|+|+. ..++++++.|+.|++||++... ....+...+.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998764 2455677899999999999972 3466699999999999998653 12234567899999997
Q ss_pred -------CCEEEEEECCCeEEEEEcCCCc----EEEEEecCCCCEEEEEEcCCC---CEEEEEeCC-eEEEEECCCCe--
Q 044075 646 -------LGLLLAAASENVVSIFDVETDR----LTHSFKGHSTEIHSVCWDTNG---EYLASVSQD-SVRVWSLASGE-- 708 (786)
Q Consensus 646 -------g~~Ll~gs~dg~I~iwD~~t~~----~i~~l~~h~~~I~sv~~spdg---~~Lasgs~D-~I~vwDl~s~~-- 708 (786)
+.+|++++.|+.|++||++++. ....+.+|...|.+++|+|++ .+|++++.| +|+|||+++..
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~ 242 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP 242 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence 4689999999999999998765 667888999999999999985 899999999 99999998743
Q ss_pred -eEEEE--ccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 709 -CIHEL--SSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 709 -~i~~l--~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
....+ ..+...|.+++|+|++++|++++.|+.|+||+...
T Consensus 243 ~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 243 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred cceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 22233 45678899999999999999999999999999763
No 53
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.8e-33 Score=300.72 Aligned_cols=282 Identities=16% Similarity=0.219 Sum_probs=215.2
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC----eeeeecCCCCCCeEEEEEcc--CCCEEEEEeCCCcEEE
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF----QTECTPDDHNHIITDVRFRP--NSTQLATSSFDKTVRI 577 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~----~~~~~l~~h~~~V~sl~fsp--dg~~Lasgs~Dg~I~V 577 (786)
.+.+|.+.|+|++|+|++++||+|+.||.|+|||+.+. +....+.+|...|++++|+| ++.+|++++.||.|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 56789999999999999999999999999999999876 46677789999999999999 6999999999999999
Q ss_pred EcCCCCc--------ceeeeecCCCCCeEEEEEecC--CCeEEEEEcCCCcEEEEeCCCCeeeEe---------------
Q 044075 578 WDAAKPN--------FCLQTYTGHNNHVMSLDFHPK--KNDLFCSCDGNSEIRFWNLSQYSCARI--------------- 632 (786)
Q Consensus 578 Wdl~s~~--------~~~~~~~~h~~~V~sl~~sp~--g~~ll~sgs~Dg~I~iwDl~~~~~~~~--------------- 632 (786)
||+.++. .....+..|...|.+++|+|+ +. ++++++.|+.|++||+++.+.+..
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9998764 346778889999999999998 65 455888999999999987654321
Q ss_pred -ecCCeEEEEEeCC---CCEEEEEECCCeEEEEEcCCCcE--EEEEecCCCCEEEEEEcCCC----CEEEEEeCC-eEEE
Q 044075 633 -SKGGTVQVRFQPR---LGLLLAAASENVVSIFDVETDRL--THSFKGHSTEIHSVCWDTNG----EYLASVSQD-SVRV 701 (786)
Q Consensus 633 -~~~~i~~i~~sp~---g~~Ll~gs~dg~I~iwD~~t~~~--i~~l~~h~~~I~sv~~spdg----~~Lasgs~D-~I~v 701 (786)
....+.+++|+|+ +..+++++.++.+.+|+...++. +..+.+|...|.+++|+|++ .+|++++.| .|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 2356789999997 89999999999998888887765 67788899999999999998 899999999 9999
Q ss_pred EECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECC----CeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEE
Q 044075 702 WSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY----QSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 702 wDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d----g~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSg 776 (786)
||++.+............+....+.+....+..+..+ ..+.+|+....+.+ .+.+|...|++++|+|++++|++|
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 324 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSA 324 (351)
T ss_dssp EEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEE
T ss_pred EeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEe
Confidence 9999876555544444444444444444444444333 34555555444444 567899999999999999999999
Q ss_pred eCCCcEEEeC
Q 044075 777 SHDKSVKIWK 786 (786)
Q Consensus 777 s~DG~I~IWd 786 (786)
+.||.|+|||
T Consensus 325 ~~dg~v~iw~ 334 (351)
T 3f3f_A 325 GDDGKVRLWK 334 (351)
T ss_dssp ETTSCEEEEE
T ss_pred cCCCcEEEEe
Confidence 9999999996
No 54
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.6e-33 Score=304.98 Aligned_cols=284 Identities=18% Similarity=0.356 Sum_probs=236.6
Q ss_pred eeEEeecCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcCCCeeeeec-------------CCCCCCeEEEEEcc-CCCE
Q 044075 501 EVSSIRKSSSKVTCCHFSS-DGKLLASAGHDKKVVVWNMENFQTECTP-------------DDHNHIITDVRFRP-NSTQ 565 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t~~~~~~l-------------~~h~~~V~sl~fsp-dg~~ 565 (786)
....+++|.+.|+|++|+| ++++||+|+.||.|+|||+.+++....+ ..|...|++++|+| ++.+
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 4556778999999999999 9999999999999999999987655544 25999999999999 7789
Q ss_pred EEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCC--eEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEE
Q 044075 566 LATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKN--DLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQV 640 (786)
Q Consensus 566 Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~--~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i 640 (786)
|++++.||.|++||+.++. ....+. +...+.++.|++.+. .++++++.|+.|++||+++++.+..+. ..+.++
T Consensus 115 l~s~~~d~~i~iwd~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~ 192 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQ-TADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAV 192 (408)
T ss_dssp EEEEETTSEEEEEETTTTE-EEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEE
T ss_pred EEEEeCCCeEEEeeCCCCc-cceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEE
Confidence 9999999999999999876 344443 778899999998654 367789999999999999887665544 678999
Q ss_pred EEeCCCC-EEEEEECCCeEEEEEcCCCc-EEEEE---------------ecCCCCEEEEEEcCCCCEEEEEeCC-eEEEE
Q 044075 641 RFQPRLG-LLLAAASENVVSIFDVETDR-LTHSF---------------KGHSTEIHSVCWDTNGEYLASVSQD-SVRVW 702 (786)
Q Consensus 641 ~~sp~g~-~Ll~gs~dg~I~iwD~~t~~-~i~~l---------------~~h~~~I~sv~~spdg~~Lasgs~D-~I~vw 702 (786)
+|+|++. .|++++.|+.|++||+++.. .+..+ ..|...|.+++|+|++.+|++++.| .|++|
T Consensus 193 ~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 193 SWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLW 272 (408)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEE
Confidence 9999998 58899999999999998774 44444 4688999999999999999999999 99999
Q ss_pred ECCCCeeEEEEccC-----CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEE
Q 044075 703 SLASGECIHELSSS-----GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 703 Dl~s~~~i~~l~~~-----~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSg 776 (786)
|+.+++.+..+..+ ...+...........+++++.++.|++||+.+++.+ .+.+|...|++++|+|++.+|+++
T Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 352 (408)
T 4a11_B 273 NSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSG 352 (408)
T ss_dssp ETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred ECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEE
Confidence 99998765444322 112222233344566888888999999999998877 566899999999999999999999
Q ss_pred eCCCcEEEeC
Q 044075 777 SHDKSVKIWK 786 (786)
Q Consensus 777 s~DG~I~IWd 786 (786)
+.||.|+|||
T Consensus 353 ~~dg~i~iw~ 362 (408)
T 4a11_B 353 SRDCNILAWV 362 (408)
T ss_dssp ETTSCEEEEE
T ss_pred CCCCeEEEEe
Confidence 9999999996
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.1e-34 Score=315.49 Aligned_cols=272 Identities=14% Similarity=0.183 Sum_probs=234.1
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeee
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTY 590 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~ 590 (786)
.+++++|+|++++|++++.|+.|++||+.+.+....+..| ..+....|++++++|++++.|+.|+|||+.++. ....+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~ 135 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL-QREID 135 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE-EEEET
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc-eeeec
Confidence 3558999999999999999999999999988877777766 455566789999999999999999999998765 56677
Q ss_pred cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee---cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCc
Q 044075 591 TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS---KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDR 667 (786)
Q Consensus 591 ~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~---~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~ 667 (786)
.+|...|.+++|+|++.. +++++.|+.|++||+.+++.+..+ ...+.+++|+|++.+|++++.|+.|++||+++++
T Consensus 136 ~~h~~~v~~~~~~~~~~~-l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEA-LISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp TSSSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred ccccCccEEEEECCCCCE-EEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 899999999999999874 558999999999999987766544 4678999999999999999999999999999999
Q ss_pred EEEEEec---CCCCEEEEE---------------------EcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc-CCCceE
Q 044075 668 LTHSFKG---HSTEIHSVC---------------------WDTNGEYLASVSQD-SVRVWSLASGECIHELSS-SGNKFH 721 (786)
Q Consensus 668 ~i~~l~~---h~~~I~sv~---------------------~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~-~~~~I~ 721 (786)
.+..+.. |...|.+++ |+|++++|++++.| .|++||+++++.+..+.. |...|.
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 294 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCN 294 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEE
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCce
Confidence 9988875 444455554 57899999999999 999999999988777754 678999
Q ss_pred EEEEeCCCC-EEEEEECCCeEEEEECCCCeE--EEEcc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 722 SCIFHPSYP-TLMVIGGYQSLELWNMAENKC--MTIAA-HDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 722 sv~fspdg~-~L~sgs~dg~I~IwDl~~~~~--~~~~~-h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+++|+|++. +|++++.|+.|++||+.+++. ..+.. |...|+++.| +++.+|++++.||.|+|||
T Consensus 295 ~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 295 SLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEE
T ss_pred eEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEe
Confidence 999999999 999999999999999998643 34554 6778888865 4788999999999999996
No 56
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.4e-32 Score=317.98 Aligned_cols=283 Identities=15% Similarity=0.280 Sum_probs=238.6
Q ss_pred eeeEEeecCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEcCCCeeeeecCCCCC---CeEEEEEccC-CCEEEEEeCCCc
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGK-LLASAGHDKKVVVWNMENFQTECTPDDHNH---IITDVRFRPN-STQLATSSFDKT 574 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~-~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~---~V~sl~fspd-g~~Lasgs~Dg~ 574 (786)
+.+..+.+|...|++++|+|+++ +|++++.|+.|++||+.+++.+..+..|.. .|++++|+|+ +++|++++.|+.
T Consensus 151 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 230 (615)
T 1pgu_A 151 NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK 230 (615)
T ss_dssp CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC
T ss_pred CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe
Confidence 46678889999999999999998 899999999999999999999999999999 9999999999 999999999999
Q ss_pred EEEEcCCCCcceeeee-c---CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC--------------
Q 044075 575 VRIWDAAKPNFCLQTY-T---GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG-------------- 636 (786)
Q Consensus 575 I~VWdl~s~~~~~~~~-~---~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~-------------- 636 (786)
|++||+.+++ .+..+ . .|...|.+++|+ ++. ++++++.|+.|++||+++++.+..+...
T Consensus 231 i~vwd~~~~~-~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (615)
T 1pgu_A 231 ISCFDGKSGE-FLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT 307 (615)
T ss_dssp EEEEETTTCC-EEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE
T ss_pred EEEEECCCCC-EeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC
Confidence 9999999877 45555 5 899999999999 655 5558888999999999876544332211
Q ss_pred ----------------------------------e---------------------------------EEEEE-------
Q 044075 637 ----------------------------------T---------------------------------VQVRF------- 642 (786)
Q Consensus 637 ----------------------------------i---------------------------------~~i~~------- 642 (786)
+ .+++|
T Consensus 308 ~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~ 387 (615)
T 1pgu_A 308 GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYS 387 (615)
T ss_dssp ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCE
T ss_pred CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEE
Confidence 1 11111
Q ss_pred ---------------------------eCC--------------------------------------CCEEEEEEC-CC
Q 044075 643 ---------------------------QPR--------------------------------------LGLLLAAAS-EN 656 (786)
Q Consensus 643 ---------------------------sp~--------------------------------------g~~Ll~gs~-dg 656 (786)
+|+ +.++++++. |+
T Consensus 388 ~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~ 467 (615)
T 1pgu_A 388 SISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGN 467 (615)
T ss_dssp EEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTS
T ss_pred EEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCC
Confidence 011 344555555 66
Q ss_pred eEEEEEcCCCcEE-EEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc-CCCceEEEEEeC------
Q 044075 657 VVSIFDVETDRLT-HSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS-SGNKFHSCIFHP------ 727 (786)
Q Consensus 657 ~I~iwD~~t~~~i-~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~-~~~~I~sv~fsp------ 727 (786)
.|++||+.+++.. ..+..|...|.+++|+|++++|++++.| .|++||+.+++++..+.. |...|.+++|+|
T Consensus 468 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~ 547 (615)
T 1pgu_A 468 TIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGAN 547 (615)
T ss_dssp CEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC----
T ss_pred eEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccccc
Confidence 6666666655444 4556789999999999999999999999 999999999999999888 999999999999
Q ss_pred ----CCCEEEEEECCCeEEEEECCCC-eEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 728 ----SYPTLMVIGGYQSLELWNMAEN-KCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 728 ----dg~~L~sgs~dg~I~IwDl~~~-~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
++.+|++++.|+.|++||+.++ +++ .+.+|...|++++|+|++. |++++.||.|+|||
T Consensus 548 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~ 611 (615)
T 1pgu_A 548 EEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWN 611 (615)
T ss_dssp --CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEE
T ss_pred ccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEe
Confidence 9999999999999999999986 444 6678999999999999999 99999999999996
No 57
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.1e-32 Score=349.20 Aligned_cols=284 Identities=22% Similarity=0.406 Sum_probs=259.7
Q ss_pred eEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 502 VSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
...+.+|.+.|+|++|+|+|++||+|+.||+|+|||+.+++.+..+.+|...|++++|+|++++|++++.|++|+|||+.
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeecCCCCCeEEEEEecCC-CeEEEEEcCCCcEEEEeCCCCeeeEee---cCCeEEEEEeCCCCEEEEEECCCe
Q 044075 582 KPNFCLQTYTGHNNHVMSLDFHPKK-NDLFCSCDGNSEIRFWNLSQYSCARIS---KGGTVQVRFQPRLGLLLAAASENV 657 (786)
Q Consensus 582 s~~~~~~~~~~h~~~V~sl~~sp~g-~~ll~sgs~Dg~I~iwDl~~~~~~~~~---~~~i~~i~~sp~g~~Ll~gs~dg~ 657 (786)
+++ .+..+.+|...|.+++|+|++ ..++++++.|+.|++||+.++++...+ ...+.+++|+|++..+++++.||.
T Consensus 688 ~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~ 766 (1249)
T 3sfz_A 688 TGK-LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGT 766 (1249)
T ss_dssp TCC-EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSE
T ss_pred CCc-eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCe
Confidence 876 678888999999999999963 457779999999999999998877654 467899999999999999999999
Q ss_pred EEEEEcCCCcEEEEEec-------------CCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEc-cCCCceEEE
Q 044075 658 VSIFDVETDRLTHSFKG-------------HSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELS-SSGNKFHSC 723 (786)
Q Consensus 658 I~iwD~~t~~~i~~l~~-------------h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~-~~~~~I~sv 723 (786)
|++||++++.....+.. +...+.+++|+|++.++++++.+.|.+||+.++..+..+. .|...|.++
T Consensus 767 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~ 846 (1249)
T 3sfz_A 767 LRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYC 846 (1249)
T ss_dssp EEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEE
T ss_pred EEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEE
Confidence 99999999887776642 2336889999999999999997899999999998887776 788999999
Q ss_pred EEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 724 IFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 724 ~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+|+|++.++++++.++.|++||+.++..+ .+.+|...|++++|+|++.+|++++.||.|++||
T Consensus 847 ~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 847 DFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp EECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 99999999999999999999999998876 5678999999999999999999999999999996
No 58
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4e-32 Score=289.06 Aligned_cols=268 Identities=21% Similarity=0.392 Sum_probs=228.1
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec--CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 512 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP--DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 512 V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l--~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
+.+|+||+++ +||+|. |++|+|||+.+++.+..+ ..|...|++++|+|++++|++|+.||+|+|||+++++ ++..
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~-~~~~ 104 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK-RLRN 104 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-EEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce-eEEE
Confidence 5789999986 777764 999999999999987766 4678889999999999999999999999999999877 5788
Q ss_pred ecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee----EeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCC
Q 044075 590 YTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA----RISKGGTVQVRFQPRLGLLLAAASENVVSIFDVET 665 (786)
Q Consensus 590 ~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~----~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t 665 (786)
+.+|...+.++.+.+ .++++++.++.+++|+....... ..+...+..+.+.+++.++++++.|+.|++||+++
T Consensus 105 ~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 105 MTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred ecCccceEEEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 889999998877763 36779999999999998875432 22346788899999999999999999999999987
Q ss_pred Cc----EEEEEecCCCCEEEEEEcCCCCEE-E--EEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEE-
Q 044075 666 DR----LTHSFKGHSTEIHSVCWDTNGEYL-A--SVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIG- 736 (786)
Q Consensus 666 ~~----~i~~l~~h~~~I~sv~~spdg~~L-a--sgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs- 736 (786)
++ .......|...|.++.+++++..+ + +++.+ .|++||.......... .+...+..+.|++++..+++++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg 260 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHG 260 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEEC
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEE
Confidence 64 334556688899999999976533 3 34455 8999999998877655 4567899999999999988876
Q ss_pred -CCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 737 -GYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 737 -~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.|+.|+|||+.+++++ .+.+|.+.|++|+|+|++.+|+||+.||+|+|||
T Consensus 261 ~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 261 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 6899999999998877 6778999999999999999999999999999997
No 59
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=7.9e-32 Score=303.54 Aligned_cols=292 Identities=16% Similarity=0.312 Sum_probs=256.1
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeee
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECT 546 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~ 546 (786)
++.....++...++.+.. .+.+..+.+|.+.|++++|+ +.+|++|+.||.|++||+.+++.+..
T Consensus 131 ~l~sg~~dg~i~vwd~~~--------------~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~ 194 (445)
T 2ovr_B 131 RIVSGSDDNTLKVWSAVT--------------GKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHT 194 (445)
T ss_dssp EEEEEETTSCEEEEETTT--------------CCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEEECCCcEEEEECCC--------------CcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEE
Confidence 344555677777776542 24667788999999999998 56999999999999999999999999
Q ss_pred cCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC
Q 044075 547 PDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ 626 (786)
Q Consensus 547 l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~ 626 (786)
+.+|...|.++.|+ ++.|++|+.||+|++||+.+++ .+..+.+|...|.+++| ++. ++++++.||.|++||+++
T Consensus 195 ~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~-~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~iwd~~~ 268 (445)
T 2ovr_B 195 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQ-CLHVLMGHVAAVRCVQY--DGR-RVVSGAYDFMVKVWDPET 268 (445)
T ss_dssp ECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCC-EEEEEECCSSCEEEEEE--CSS-CEEEEETTSCEEEEEGGG
T ss_pred ECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCc-EEEEEcCCcccEEEEEE--CCC-EEEEEcCCCEEEEEECCC
Confidence 99999999999996 5689999999999999999876 57788899999999999 444 455889999999999999
Q ss_pred CeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEE
Q 044075 627 YSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVW 702 (786)
Q Consensus 627 ~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vw 702 (786)
.+++..+. ..+.++.| ++.++++++.|+.|++||+++++.+..+.+|...+.++.++ +.+|++++.| .|++|
T Consensus 269 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vw 344 (445)
T 2ovr_B 269 ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIW 344 (445)
T ss_dssp TEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEE
T ss_pred CcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEE
Confidence 88877655 56777777 78999999999999999999999999999999999988874 6799999999 99999
Q ss_pred ECCCCeeEEEEcc---CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEc------ccCCCeEEEEEcCCCCEE
Q 044075 703 SLASGECIHELSS---SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIA------AHDCVISALAQSPVTGMV 773 (786)
Q Consensus 703 Dl~s~~~i~~l~~---~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~------~h~~~V~slafspdg~~L 773 (786)
|+++++++..+.. |...|.+++|+ +.+|++++.||.|++||+.+++.+... .|.+.|++++|+|++.+|
T Consensus 345 d~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 422 (445)
T 2ovr_B 345 DIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVC 422 (445)
T ss_dssp ETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEE
T ss_pred ECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEE
Confidence 9999999999986 77889999996 579999999999999999999877433 788999999999999999
Q ss_pred EEEeCCCc----EEEeC
Q 044075 774 ASASHDKS----VKIWK 786 (786)
Q Consensus 774 aSgs~DG~----I~IWd 786 (786)
++|+.||+ |.|||
T Consensus 423 a~~~~dg~~~~~l~v~d 439 (445)
T 2ovr_B 423 AVGSRNGTEETKLLVLD 439 (445)
T ss_dssp EEECSSSSSCCEEEEEE
T ss_pred EEcccCCCCccEEEEEE
Confidence 99999998 99986
No 60
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.8e-32 Score=302.32 Aligned_cols=275 Identities=15% Similarity=0.127 Sum_probs=223.2
Q ss_pred CCCeEEEEEcCCCCEEEEEECCC-------eEEEEEcCCCee----------eeecCCCCCCeEEEEEccCCCEEEEEe-
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDK-------KVVVWNMENFQT----------ECTPDDHNHIITDVRFRPNSTQLATSS- 570 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg-------~V~IWdl~t~~~----------~~~l~~h~~~V~sl~fspdg~~Lasgs- 570 (786)
..+|+|++|+||+++||+|+.+. .|+||++..... ...+..|...|.+++++ ++.+++|+
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 45899999999999999997543 599999875432 23467888899988775 55677654
Q ss_pred ----------CCCcEEEEcCCCCcceeee--------ecCCCCCeEEEEEecCCCeEE-EEEcCCCcEEEEeCCCCeeeE
Q 044075 571 ----------FDKTVRIWDAAKPNFCLQT--------YTGHNNHVMSLDFHPKKNDLF-CSCDGNSEIRFWNLSQYSCAR 631 (786)
Q Consensus 571 ----------~Dg~I~VWdl~s~~~~~~~--------~~~h~~~V~sl~~sp~g~~ll-~sgs~Dg~I~iwDl~~~~~~~ 631 (786)
.|++|++|++......+.. ...+...+.+++|+|+|..++ ++++.|++|++||+.+++++.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 4678999998765432221 123456689999999999875 456689999999999988776
Q ss_pred eec--CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEE--EecCCCCEEEEEEcCCCCEEEEEeCC-----eEEEE
Q 044075 632 ISK--GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHS--FKGHSTEIHSVCWDTNGEYLASVSQD-----SVRVW 702 (786)
Q Consensus 632 ~~~--~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~--l~~h~~~I~sv~~spdg~~Lasgs~D-----~I~vw 702 (786)
.+. +.+.+++|+|++.++++++. +.+.+|+..++..+.. ...|...|.+++|+|++.++++++.+ .+++|
T Consensus 172 ~~~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~ 250 (365)
T 4h5i_A 172 EIETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKI 250 (365)
T ss_dssp EEECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEE
T ss_pred EeCCCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeec
Confidence 544 67899999999999988875 5677777777765543 34588899999999999999998765 47889
Q ss_pred ECCCCee----EEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEE-E-cccCCCeEEEEEcCCCCEEEEE
Q 044075 703 SLASGEC----IHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMT-I-AAHDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 703 Dl~s~~~----i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~-~-~~h~~~V~slafspdg~~LaSg 776 (786)
|+..... ...+..|...|++++|+|++++|++++.|+.|+|||+.+++++. + .+|...|++|+|+||+++||||
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 251 SIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASV 330 (365)
T ss_dssp EEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEE
T ss_pred ccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEE
Confidence 8877643 45677888999999999999999999999999999999999874 3 5899999999999999999999
Q ss_pred eCCCcEEEeC
Q 044075 777 SHDKSVKIWK 786 (786)
Q Consensus 777 s~DG~I~IWd 786 (786)
|.|++|+|||
T Consensus 331 S~D~tvrvw~ 340 (365)
T 4h5i_A 331 SAANTIHIIK 340 (365)
T ss_dssp ETTSEEEEEE
T ss_pred eCCCeEEEEE
Confidence 9999999996
No 61
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.4e-32 Score=309.26 Aligned_cols=269 Identities=19% Similarity=0.429 Sum_probs=240.5
Q ss_pred eEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 502 VSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
+....+|...|+|+.| ++++|++|+.||.|+|||+.+++....+.+|...|++++| ++++|++|+.||+|++||+.
T Consensus 126 ~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~ 201 (435)
T 1p22_A 126 IHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 201 (435)
T ss_dssp EECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS
T ss_pred EecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC
Confidence 3344567888999988 6889999999999999999999999999999999999999 68899999999999999999
Q ss_pred CCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee---Ee---ecCCeEEEEEeCCCCEEEEEECC
Q 044075 582 KPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA---RI---SKGGTVQVRFQPRLGLLLAAASE 655 (786)
Q Consensus 582 s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~---~~---~~~~i~~i~~sp~g~~Ll~gs~d 655 (786)
+++ .+..+.+|...|.+++|++ + ++++|+.||.|++||+.+.... .. +...+.+++| ++.++++++.|
T Consensus 202 ~~~-~~~~~~~h~~~v~~l~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~d 275 (435)
T 1p22_A 202 TGE-MLNTLIHHCEAVLHLRFNN--G-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD 275 (435)
T ss_dssp SCC-EEEEECCCCSCEEEEECCT--T-EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETT
T ss_pred CCc-EEEEEcCCCCcEEEEEEcC--C-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCC
Confidence 877 5788889999999999974 2 6779999999999999876543 22 3356777777 77899999999
Q ss_pred CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEE
Q 044075 656 NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMV 734 (786)
Q Consensus 656 g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~s 734 (786)
+.|++||+++++.+..+.+|...|.++.| ++.+|++++.| .|++||+++++++..+..|...|.+++| ++.+|++
T Consensus 276 g~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s 351 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVS 351 (435)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEE
T ss_pred CeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEE
Confidence 99999999999999999999999999998 47899999999 9999999999999999999999999999 6789999
Q ss_pred EECCCeEEEEECCCCe----------EEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 735 IGGYQSLELWNMAENK----------CMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 735 gs~dg~I~IwDl~~~~----------~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
++.||.|++||+.++. ...+..|...|++++| ++.+|++|+.||.|+|||
T Consensus 352 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd 411 (435)
T 1p22_A 352 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 411 (435)
T ss_dssp EETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred EeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEE
Confidence 9999999999987653 4477899999999999 688999999999999997
No 62
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-34 Score=330.62 Aligned_cols=282 Identities=12% Similarity=0.096 Sum_probs=221.3
Q ss_pred eEEeecCCCCeEEEEEcCC------CCEEEEEECCCeEEEEEcCCCee-----------eeecCCCCCCeEEEEEccCCC
Q 044075 502 VSSIRKSSSKVTCCHFSSD------GKLLASAGHDKKVVVWNMENFQT-----------ECTPDDHNHIITDVRFRPNST 564 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpd------g~~Lasgs~Dg~V~IWdl~t~~~-----------~~~l~~h~~~V~sl~fspdg~ 564 (786)
...+.+|.+.|.+|+|+|+ +.+||+++.||+|+|||+.+++. ...+.+|...|++++|++++
T Consensus 200 ~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~- 278 (524)
T 2j04_B 200 VQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT- 278 (524)
T ss_dssp EEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-
T ss_pred EEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-
Confidence 4457788999999999996 57999999999999999986542 23678899999999999864
Q ss_pred EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEE--EEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-----CCe
Q 044075 565 QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSL--DFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-----GGT 637 (786)
Q Consensus 565 ~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl--~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-----~~i 637 (786)
.|++|+.||+|++||++++..+...+.+|...|.+| .|+|++..+|++|+.|++|++||+++.++...+. ..+
T Consensus 279 ~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v 358 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNL 358 (524)
T ss_dssp EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSC
T ss_pred eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcc
Confidence 899999999999999997755566788999999999 4666665788899999999999999876543322 246
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEc--
Q 044075 638 VQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELS-- 714 (786)
Q Consensus 638 ~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~-- 714 (786)
.+++|+|++..+++++.|+.|++||++++.++..+.+|...|++|+|+|++.+|++|+.| +|+|||+... .+....
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~ 437 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNS 437 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC---
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccC
Confidence 789999999999999999999999999998888888999999999999999999999999 9999998654 221111
Q ss_pred ---cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCC---EEEEEeCCCcEEEeC
Q 044075 715 ---SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTG---MVASASHDKSVKIWK 786 (786)
Q Consensus 715 ---~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~---~LaSgs~DG~I~IWd 786 (786)
.+...+.+++|+|++..+. ...+..+..|+........+.+|...|++|+|+|++. +||+|+.||.|+||+
T Consensus 438 ~~~~~~~~v~~v~~sp~g~~~~-~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 438 SATQKSLRLWKWDYSIKDDKYR-IDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp ---CCCCEEEECBCCSSSCEEE-ECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred ccceeeeEEEEeccCCCCCeEE-ccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 1122577899999998542 2222223333333444557889999999999999965 999999999999995
No 63
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.4e-32 Score=298.57 Aligned_cols=264 Identities=19% Similarity=0.354 Sum_probs=231.1
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC-----
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF----- 541 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~----- 541 (786)
++.....|+...++... ..+....+..|...|.+++|+|+|.+|++|+.|+.|++|++...
T Consensus 78 ~l~s~s~Dg~v~vWd~~--------------~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~ 143 (354)
T 2pbi_B 78 RIVSSSQDGKVIVWDSF--------------TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENM 143 (354)
T ss_dssp EEEEEETTSEEEEEETT--------------TCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCS
T ss_pred EEEEEeCCCeEEEEECC--------------CCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccc
Confidence 45555567777777543 22345567789999999999999999999999999999998643
Q ss_pred -eeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCC-CeEEEEEcCCCcE
Q 044075 542 -QTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKK-NDLFCSCDGNSEI 619 (786)
Q Consensus 542 -~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g-~~ll~sgs~Dg~I 619 (786)
.....+..|...|.+++|+|++..|++++.|++|++||+++++ ++..+.+|...|.+++|+|.. ..+|++|+.||.|
T Consensus 144 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v 222 (354)
T 2pbi_B 144 AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ-LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKA 222 (354)
T ss_dssp GGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCE
T ss_pred cccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe-EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeE
Confidence 3445667899999999999999999999999999999999876 578889999999999999863 3567799999999
Q ss_pred EEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecC--CCCEEEEEEcCCCCEEEEE
Q 044075 620 RFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGH--STEIHSVCWDTNGEYLASV 694 (786)
Q Consensus 620 ~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h--~~~I~sv~~spdg~~Lasg 694 (786)
++||+++++++..+. ..+.+++|+|++..|++++.|+.|++||++..+.+..+..+ ...+.+++|+|++.+|+++
T Consensus 223 ~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g 302 (354)
T 2pbi_B 223 MVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAG 302 (354)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEE
Confidence 999999988876654 57899999999999999999999999999998877776643 4578999999999999999
Q ss_pred eCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEE
Q 044075 695 SQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWN 745 (786)
Q Consensus 695 s~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwD 745 (786)
+.| .|+|||+.+++.+..+.+|...|.+++|+|++.+|++++.|+.|+||+
T Consensus 303 ~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 303 YNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999 999999999999999999999999999999999999999999999996
No 64
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-32 Score=296.06 Aligned_cols=277 Identities=20% Similarity=0.364 Sum_probs=214.2
Q ss_pred ccccCCCcceeEeccCCCCceeeeccccCCCcccccccccceeeeeEEe-ec-CCCCeEEEEEcCCCCEEEEEECCCeEE
Q 044075 457 IGSLDDNVESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSI-RK-SSSKVTCCHFSSDGKLLASAGHDKKVV 534 (786)
Q Consensus 457 v~sld~~~~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l-~~-H~~~V~~lafSpdg~~Lasgs~Dg~V~ 534 (786)
|.+++...+ ++.....|+...++.+... .+..+..+ .+ |.+.|.+++|+|++++||+|+.|++|+
T Consensus 17 v~~~~~s~~-~las~~~D~~i~lw~~~~~------------~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 83 (330)
T 2hes_X 17 IWSFDFSQG-ILATGSTDRKIKLVSVKYD------------DFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83 (330)
T ss_dssp EEEEEEETT-EEEEEESSSCEEEEECSSS------------CCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeeeccCCC-EEEEEcCCCEEEEEEecCC------------CeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 333443333 5666667777777765421 12334444 34 999999999999999999999999999
Q ss_pred EEEcCC-------CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc---ceeeeecCCCCCeEEEEEec
Q 044075 535 VWNMEN-------FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN---FCLQTYTGHNNHVMSLDFHP 604 (786)
Q Consensus 535 IWdl~t-------~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~---~~~~~~~~h~~~V~sl~~sp 604 (786)
|||+.. .+.+..+.+|...|++++|+|++++|++|+.|++|+|||+.... .++..+.+|...|.+++|+|
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p 163 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP 163 (330)
T ss_dssp EEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS
T ss_pred EEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC
Confidence 999853 45677889999999999999999999999999999999995432 34667889999999999999
Q ss_pred CCCeEEEEEcCCCcEEEEeCCCC--eeeEee---cCCeEEEEEeCC--CCEEEEEECCCeEEEEEcCCC--------cEE
Q 044075 605 KKNDLFCSCDGNSEIRFWNLSQY--SCARIS---KGGTVQVRFQPR--LGLLLAAASENVVSIFDVETD--------RLT 669 (786)
Q Consensus 605 ~g~~ll~sgs~Dg~I~iwDl~~~--~~~~~~---~~~i~~i~~sp~--g~~Ll~gs~dg~I~iwD~~t~--------~~i 669 (786)
++.. |++++.|++|++||+... +++..+ ...+.+++|+|+ +..|++++.|+.|++||++.+ ...
T Consensus 164 ~~~~-l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 242 (330)
T 2hes_X 164 SEAL-LASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCE 242 (330)
T ss_dssp SSSE-EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEE
T ss_pred CCCE-EEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEe
Confidence 8775 559999999999998765 444443 467899999998 678999999999999998754 344
Q ss_pred EEEec-CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe--eEEE-EccCCC-ceEEEEEeC--CCCEEEEEECCCeE
Q 044075 670 HSFKG-HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE--CIHE-LSSSGN-KFHSCIFHP--SYPTLMVIGGYQSL 741 (786)
Q Consensus 670 ~~l~~-h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~--~i~~-l~~~~~-~I~sv~fsp--dg~~L~sgs~dg~I 741 (786)
..+.. |...|.+++|++++ +|++++.| .|+|||..+++ .+.. +..|.. .|.+++|+| ++.+|++++.|+.|
T Consensus 243 ~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v 321 (330)
T 2hes_X 243 AILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIV 321 (330)
T ss_dssp EECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEE
T ss_pred eecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcE
Confidence 45554 89999999999765 78888888 99999998874 3333 356766 899999999 68899999999999
Q ss_pred EEEECCC
Q 044075 742 ELWNMAE 748 (786)
Q Consensus 742 ~IwDl~~ 748 (786)
+|||+.+
T Consensus 322 ~~W~~~~ 328 (330)
T 2hes_X 322 NFWSLEK 328 (330)
T ss_dssp EEEEC--
T ss_pred EEEEecc
Confidence 9999864
No 65
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.5e-32 Score=296.32 Aligned_cols=274 Identities=12% Similarity=0.217 Sum_probs=224.0
Q ss_pred ceeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeee
Q 044075 465 ESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTE 544 (786)
Q Consensus 465 ~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~ 544 (786)
..++.....|+...++.+..... ......+...+.+|...|.+++|+|++.+|++|+.|++|+|||+.+++.+
T Consensus 39 ~~~l~sgs~D~~v~iWd~~~~~~-------~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~ 111 (343)
T 2xzm_R 39 SPVLISGSRDKTVMIWKLYEEEQ-------NGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTY 111 (343)
T ss_dssp CCEEEEEETTSCEEEEEECSSCC-------SSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEE
T ss_pred CCEEEEEcCCCEEEEEECCcCCc-------ccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 34566666677888877653211 11123456788999999999999999999999999999999999999999
Q ss_pred eecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeee---cCCCCCeEEEEEecCCC---------eEEEE
Q 044075 545 CTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTY---TGHNNHVMSLDFHPKKN---------DLFCS 612 (786)
Q Consensus 545 ~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~---~~h~~~V~sl~~sp~g~---------~ll~s 612 (786)
..+.+|...|++++|+|++++|++++.|++|++||+.... .... ..|...|.+++|+|++. .++++
T Consensus 112 ~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s 189 (343)
T 2xzm_R 112 KRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC--KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFAS 189 (343)
T ss_dssp EEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE--EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEE
T ss_pred EEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc--eeeeecccCCCceeeeeeeccccccccccCCCCCEEEE
Confidence 9999999999999999999999999999999999997432 2222 37889999999999873 46779
Q ss_pred EcCCCcEEEEeCCCCeeeE---eecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCCC
Q 044075 613 CDGNSEIRFWNLSQYSCAR---ISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTNG 688 (786)
Q Consensus 613 gs~Dg~I~iwDl~~~~~~~---~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spdg 688 (786)
++.|+.|++||... .... .+...+.+++|+|++.+|++++.|+.|++||+... .....+. +...|.+++|+|++
T Consensus 190 ~~~d~~i~iwd~~~-~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~ 267 (343)
T 2xzm_R 190 VGWDGRLKVWNTNF-QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKL 267 (343)
T ss_dssp EETTSEEEEEETTT-EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSS
T ss_pred EcCCCEEEEEcCCC-ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCC
Confidence 99999999999543 3333 34467899999999999999999999999999543 4444443 56679999999999
Q ss_pred CEEEEEeCCeEEEEECCCCeeEE--EEc-----------cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC
Q 044075 689 EYLASVSQDSVRVWSLASGECIH--ELS-----------SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 689 ~~Lasgs~D~I~vwDl~s~~~i~--~l~-----------~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~ 749 (786)
.++++++++.|++||+.+++... .+. .|...|.+++|+|++++|++++.||.|++|++.++
T Consensus 268 ~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 268 QWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 99887776699999998765433 443 56778999999999999999999999999998654
No 66
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.3e-32 Score=301.71 Aligned_cols=239 Identities=23% Similarity=0.378 Sum_probs=212.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
+...|++++|+|+|++||+|+.|+.|+|||+.+++.+..+.+|...|++++|+|++.+|++++.|++|++||+.++. +.
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~-~~ 200 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ-CS 200 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-EE
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe-eE
Confidence 44469999999999999999999999999999999999999999999999999999999999999999999999876 34
Q ss_pred eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee----------cCCeEEEEEeCCCCEEEEEECCCe
Q 044075 588 QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS----------KGGTVQVRFQPRLGLLLAAASENV 657 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~----------~~~i~~i~~sp~g~~Ll~gs~dg~ 657 (786)
..+. +...|.+++|+|....++++++.|+.|++||++++..+... ...+.+++|+|++.+|++++.|+.
T Consensus 201 ~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 201 LTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp EEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 4443 56789999999955556779999999999999988765443 356899999999999999999999
Q ss_pred EEEEEcCCC------------cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEE
Q 044075 658 VSIFDVETD------------RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCI 724 (786)
Q Consensus 658 I~iwD~~t~------------~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~ 724 (786)
|++||+++. .+...+.+|...|.+++|++++.+|++++.| .|++||+.+++++..+.+|...|.+++
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~ 359 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVA 359 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEE
Confidence 999999763 3456778899999999999999999999999 999999999999999999999999999
Q ss_pred EeC------CCCEEEEEECCCeEEEEECCC
Q 044075 725 FHP------SYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 725 fsp------dg~~L~sgs~dg~I~IwDl~~ 748 (786)
|++ ++.+|++++.|+.|+||++..
T Consensus 360 ~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 360 VANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp ECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred ecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 986 678999999999999999764
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.1e-31 Score=300.88 Aligned_cols=296 Identities=17% Similarity=0.240 Sum_probs=253.1
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeee
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECT 546 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~ 546 (786)
++.....|+...++.+.. .+.+..+.+|.+.|++++|++++ +|++|+.||+|+|||+.+++.+..
T Consensus 134 ~l~sgs~dg~i~vwd~~~--------------~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~ 198 (464)
T 3v7d_B 134 YVITGADDKMIRVYDSIN--------------KKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHV 198 (464)
T ss_dssp EEEEEETTSCEEEEETTT--------------TEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEEcCCCcEEEEECCC--------------CcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEE
Confidence 455555677777776542 24677888999999999999988 999999999999999999999999
Q ss_pred cCCCCCCeEEEEEc--cCCCEEEEEeCCCcEEEEcCCCCcce----------------------eeeecCCCCCeEEEEE
Q 044075 547 PDDHNHIITDVRFR--PNSTQLATSSFDKTVRIWDAAKPNFC----------------------LQTYTGHNNHVMSLDF 602 (786)
Q Consensus 547 l~~h~~~V~sl~fs--pdg~~Lasgs~Dg~I~VWdl~s~~~~----------------------~~~~~~h~~~V~sl~~ 602 (786)
+.+|...|.+++|+ +++.+|++++.|++|++||+.+.... ...+.+|...|.++..
T Consensus 199 ~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 278 (464)
T 3v7d_B 199 FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG 278 (464)
T ss_dssp ECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE
T ss_pred ECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC
Confidence 99999999999999 47789999999999999999876522 4567788888988854
Q ss_pred ecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCE
Q 044075 603 HPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEI 679 (786)
Q Consensus 603 sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I 679 (786)
++. ++++++.|+.|++||+.+.+++..+. ..+.+++|+|++..+++++.|+.|++||+++++++..+.+|...|
T Consensus 279 --~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v 355 (464)
T 3v7d_B 279 --HGN-IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALV 355 (464)
T ss_dssp --ETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred --CCC-EEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcE
Confidence 455 55589999999999999988877654 668999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEE--Ecc
Q 044075 680 HSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMT--IAA 756 (786)
Q Consensus 680 ~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~--~~~ 756 (786)
.+++|+ +.+|++++.| .|++||+.++.....+. +...+..++|++++.++++++ |+.|++||+.+++.+. ...
T Consensus 356 ~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~ 431 (464)
T 3v7d_B 356 GLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILK 431 (464)
T ss_dssp EEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTT
T ss_pred EEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhcc
Confidence 999997 5899999999 99999999988776663 567788889999999999988 8999999999999885 468
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 757 HDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 757 h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
|...|++++|+ ...++++++.||.+.+|
T Consensus 432 ~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 432 DADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp TCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred CCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 89999999998 34466666777766554
No 68
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.6e-32 Score=288.91 Aligned_cols=265 Identities=23% Similarity=0.397 Sum_probs=230.8
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeee
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECT 546 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~ 546 (786)
++.....++...++.... .+.+..+.+|...|.+++|+|++++|++|+.|+.|+|||+.+++.+..
T Consensus 37 ~l~s~~~dg~i~iw~~~~--------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~ 102 (312)
T 4ery_A 37 WLASSSADKLIKIWGAYD--------------GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT 102 (312)
T ss_dssp EEEEEETTSCEEEEETTT--------------CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEeeCCCeEEEEeCCC--------------cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEE
Confidence 344444566666665431 234567789999999999999999999999999999999999999999
Q ss_pred cCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC
Q 044075 547 PDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ 626 (786)
Q Consensus 547 l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~ 626 (786)
+.+|...|.+++|+|++++|++++.|+.|++||+++++ .+..+..|...|.+++|+|++..+ ++++.|+.|++||+++
T Consensus 103 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~wd~~~ 180 (312)
T 4ery_A 103 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWDTAS 180 (312)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTT
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE-EEEEecCCCCcEEEEEEcCCCCEE-EEEeCCCcEEEEECCC
Confidence 99999999999999999999999999999999999876 577888999999999999988755 5889999999999998
Q ss_pred CeeeEeec----CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEE---EEEcCCCCEEEEEeCC-e
Q 044075 627 YSCARISK----GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHS---VCWDTNGEYLASVSQD-S 698 (786)
Q Consensus 627 ~~~~~~~~----~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~s---v~~spdg~~Lasgs~D-~ 698 (786)
++.+.... ..+..++|+|++.+|++++.|+.|++||+++++.+..+.+|...+.+ ....+++.+|++++.| .
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 260 (312)
T 4ery_A 181 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 260 (312)
T ss_dssp CCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSC
T ss_pred CceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCE
Confidence 87765542 46788999999999999999999999999999999999888765433 2334678999999999 9
Q ss_pred EEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEE--CCCeEEEEECC
Q 044075 699 VRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIG--GYQSLELWNMA 747 (786)
Q Consensus 699 I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs--~dg~I~IwDl~ 747 (786)
|++||+.+++.+..+..|...|.+++|+|++.+|++++ .|+.|++|+.+
T Consensus 261 i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 261 VYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999999999999999999999999999999998 58999999864
No 69
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-32 Score=295.50 Aligned_cols=247 Identities=19% Similarity=0.354 Sum_probs=209.6
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC--eeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC
Q 044075 505 IRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF--QTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 505 l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~--~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s 582 (786)
..+|.+.|.+++|+|++++||+|+.|+.|+||++.+. +.+..+.+|...|++++|+|++++|++|+.|++|++||+.+
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 4689999999999999999999999999999999876 46778899999999999999999999999999999999987
Q ss_pred Cc--ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee--Ee---ecCCeEEEEEeCCCCEEEEEECC
Q 044075 583 PN--FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA--RI---SKGGTVQVRFQPRLGLLLAAASE 655 (786)
Q Consensus 583 ~~--~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~--~~---~~~~i~~i~~sp~g~~Ll~gs~d 655 (786)
.. .++..+.+|...|.+++|+|++..+ ++++.|+.|++||++..... .. +...+.+++|+|++.+|++++.|
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l-~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQELL-ASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSSSCE-EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCCCEE-EEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 54 2456778999999999999998755 58999999999999876532 22 34678999999999999999999
Q ss_pred CeEEEEEcCCC---------------cEEEEEec-CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe---------e
Q 044075 656 NVVSIFDVETD---------------RLTHSFKG-HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE---------C 709 (786)
Q Consensus 656 g~I~iwD~~t~---------------~~i~~l~~-h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~---------~ 709 (786)
+.|++||.... +++..+.+ |...|.+++|++++.+|++++.| .|++|+..... .
T Consensus 216 ~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~ 295 (345)
T 3fm0_A 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLT 295 (345)
T ss_dssp SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEE
T ss_pred CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEE
Confidence 99999996321 23445555 88999999999999999999999 99999987542 1
Q ss_pred EEEEccCCCceEEEEEeCCCC-EEEEEECCCeEEEEECCCCeEE
Q 044075 710 IHELSSSGNKFHSCIFHPSYP-TLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 710 i~~l~~~~~~I~sv~fspdg~-~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
......|...|.+++|+|++. +|++++.||.|++|++.+++..
T Consensus 296 ~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 296 AHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp EEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred eeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 223457889999999999984 9999999999999999887654
No 70
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.1e-32 Score=315.27 Aligned_cols=278 Identities=18% Similarity=0.339 Sum_probs=248.0
Q ss_pred eeeEEeecCCCC-eEEEEEcC--CCCEEEEEECCCeEEEEEcCCC--------eeeeecCCCCCCeEEEEEccCCCEEEE
Q 044075 500 NEVSSIRKSSSK-VTCCHFSS--DGKLLASAGHDKKVVVWNMENF--------QTECTPDDHNHIITDVRFRPNSTQLAT 568 (786)
Q Consensus 500 ~~v~~l~~H~~~-V~~lafSp--dg~~Lasgs~Dg~V~IWdl~t~--------~~~~~l~~h~~~V~sl~fspdg~~Las 568 (786)
+.+..+.+|.+. |++++|+| ++++||+|+.||.|+|||+.++ +....+..|...|.+++|+|++++|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 466788999999 99999999 9999999999999999999744 677788899999999999999999999
Q ss_pred EeCC----CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---C---CeE
Q 044075 569 SSFD----KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---G---GTV 638 (786)
Q Consensus 569 gs~D----g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~---~i~ 638 (786)
++.+ +.|++||. ++ ....+.+|...|.+++|+|++..++++++.|+.|++||+.+.+....+. . .+.
T Consensus 134 ~~~~~~~~~~v~~~d~--~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~ 210 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDS--GN-SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVR 210 (615)
T ss_dssp EECCSSCSEEEEETTT--CC-EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEE
T ss_pred eccCCCCccEEEEEEC--CC-cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEE
Confidence 9988 78999983 33 5778889999999999999998788899999999999999988776654 4 688
Q ss_pred EEEEeCC-CCEEEEEECCCeEEEEEcCCCcEEEEE-e---cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEE
Q 044075 639 QVRFQPR-LGLLLAAASENVVSIFDVETDRLTHSF-K---GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHE 712 (786)
Q Consensus 639 ~i~~sp~-g~~Ll~gs~dg~I~iwD~~t~~~i~~l-~---~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~ 712 (786)
+++|+|+ +.+|++++.|+.|++||+++++.+..+ . .|...|.+++|+ ++.+|++++.| .|++||+++++.+..
T Consensus 211 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 211 DVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQK 289 (615)
T ss_dssp EEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 9999999 999999999999999999999999998 6 799999999999 99999999999 999999999999998
Q ss_pred EccC----CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 713 LSSS----GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 713 l~~~----~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+..+ ...+.++.|. ++.++++++.++.|++||+.+++.+ .+..|...|++++| |+ |++++.||.|++||
T Consensus 290 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~i~~w~ 363 (615)
T 1pgu_A 290 WTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGRIMEWS 363 (615)
T ss_dssp EECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSCEEETT
T ss_pred EcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCeEEEEE
Confidence 8876 3667888886 8899999999999999999987665 56688888888888 77 77777777777775
No 71
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.1e-32 Score=290.81 Aligned_cols=242 Identities=19% Similarity=0.345 Sum_probs=208.5
Q ss_pred eecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc-ceeeeecCCCCCeEEEEEecC-CCeEEEEEcCCCcEEEE
Q 044075 545 CTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN-FCLQTYTGHNNHVMSLDFHPK-KNDLFCSCDGNSEIRFW 622 (786)
Q Consensus 545 ~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~-~~~~~~~~h~~~V~sl~~sp~-g~~ll~sgs~Dg~I~iw 622 (786)
..+.+|...|++++|+|++++|++|+.|++|+|||+.... .++..+.+|...|.+++|++. ...+|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 4577899999999999999999999999999999997532 357788999999999999764 34567799999999999
Q ss_pred eCCCCe--eeEe---ecCCeEEEEEeCC--CCEEEEEECCCeEEEEEcCCCc--EEEEEecCCCCEEEEEEcCC------
Q 044075 623 NLSQYS--CARI---SKGGTVQVRFQPR--LGLLLAAASENVVSIFDVETDR--LTHSFKGHSTEIHSVCWDTN------ 687 (786)
Q Consensus 623 Dl~~~~--~~~~---~~~~i~~i~~sp~--g~~Ll~gs~dg~I~iwD~~t~~--~i~~l~~h~~~I~sv~~spd------ 687 (786)
|++++. .+.. +...+.+++|+|+ +.+|++++.|+.|++||+++.. ....+.+|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998764 2222 4467899999997 8899999999999999998763 24567789999999999997
Q ss_pred -------CCEEEEEeCC-eEEEEECCCCe----eEEEEccCCCceEEEEEeCCC---CEEEEEECCCeEEEEECCCCe--
Q 044075 688 -------GEYLASVSQD-SVRVWSLASGE----CIHELSSSGNKFHSCIFHPSY---PTLMVIGGYQSLELWNMAENK-- 750 (786)
Q Consensus 688 -------g~~Lasgs~D-~I~vwDl~s~~----~i~~l~~~~~~I~sv~fspdg---~~L~sgs~dg~I~IwDl~~~~-- 750 (786)
+++|++++.| +|+|||+++++ ++..+.+|...|.+++|+|++ .+|++++.|+.|+|||+.+..
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~ 242 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP 242 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence 5799999999 99999998765 667888999999999999985 799999999999999998642
Q ss_pred --EEEE--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 751 --CMTI--AAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 751 --~~~~--~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
...+ ..|...|.+++|+|++++|++++.||.|+||+
T Consensus 243 ~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~ 282 (297)
T 2pm7_B 243 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (297)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred cceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 2233 46888999999999999999999999999995
No 72
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.2e-31 Score=299.89 Aligned_cols=272 Identities=22% Similarity=0.470 Sum_probs=241.9
Q ss_pred eeeeEEeecCCCCe-EEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEE
Q 044075 499 FNEVSSIRKSSSKV-TCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRI 577 (786)
Q Consensus 499 ~~~v~~l~~H~~~V-~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~V 577 (786)
++....+.+|.+.| +|+. +++++|++|+.||.|+|||+.+++.+..+.+|...|++++|+ +++|++|+.||+|++
T Consensus 108 ~~~~~~l~~h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~v 183 (445)
T 2ovr_B 108 LKSPKVLKGHDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKV 183 (445)
T ss_dssp CCCCEEEECSTTSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred cceeEEecccCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEE
Confidence 34566788999875 5544 468999999999999999999999999999999999999998 669999999999999
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEEC
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~ 654 (786)
||+.+++ ....+.+|...|.++.|++ + .+++++.||.|++||+.+++.+..+. ..+.++.+ ++..+++++.
T Consensus 184 wd~~~~~-~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 257 (445)
T 2ovr_B 184 WNAETGE-CIHTLYGHTSTVRCMHLHE--K-RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAY 257 (445)
T ss_dssp EETTTTE-EEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEET
T ss_pred EECCcCc-EEEEECCCCCcEEEEEecC--C-EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcC
Confidence 9999876 5778889999999999973 3 46699999999999999988776554 56777777 7889999999
Q ss_pred CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEE
Q 044075 655 ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLM 733 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~ 733 (786)
|+.|++||+++++.+..+.+|...|.+++| ++.+|++++.| .|++||+++++++..+..|...+.++.++ +.+++
T Consensus 258 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 333 (445)
T 2ovr_B 258 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILV 333 (445)
T ss_dssp TSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEE
T ss_pred CCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEE
Confidence 999999999999999999999999999999 88999999999 99999999999999999999999988875 56999
Q ss_pred EEECCCeEEEEECCCCeEEE-Ecc---cCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 734 VIGGYQSLELWNMAENKCMT-IAA---HDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 734 sgs~dg~I~IwDl~~~~~~~-~~~---h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+++.|+.|++||+.+++.+. +.. |...|++++|+ +.+|++|+.||.|+|||
T Consensus 334 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd 388 (445)
T 2ovr_B 334 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWD 388 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEE
Confidence 99999999999999888764 443 88999999996 67999999999999996
No 73
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.5e-32 Score=344.72 Aligned_cols=304 Identities=21% Similarity=0.382 Sum_probs=260.6
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeee
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECT 546 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~ 546 (786)
++.....++...++... +.+.+..+.+|.+.|++++|+|++++||+|+.||.|+|||+.+++.+..
T Consensus 629 ~l~s~~~d~~i~vw~~~--------------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 694 (1249)
T 3sfz_A 629 RIASCGADKTLQVFKAE--------------TGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHT 694 (1249)
T ss_dssp EEEEEETTSCEEEEETT--------------TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEEeCCCeEEEEECC--------------CCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 34444455666666543 2346778889999999999999999999999999999999999999999
Q ss_pred cCCCCCCeEEEEEcc--CCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeC
Q 044075 547 PDDHNHIITDVRFRP--NSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNL 624 (786)
Q Consensus 547 l~~h~~~V~sl~fsp--dg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl 624 (786)
+.+|...|.+++|+| ++.++++|+.|+.|++||+.++. +...+.+|...|.+++|+|++..+ ++++.||.|++||+
T Consensus 695 ~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~-~~~~~~~h~~~v~~~~~sp~~~~l-~s~s~dg~v~vwd~ 772 (1249)
T 3sfz_A 695 YDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE-CRNTMFGHTNSVNHCRFSPDDELL-ASCSADGTLRLWDV 772 (1249)
T ss_dssp EECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS-EEEEECCCSSCEEEEEECSSTTEE-EEEESSSEEEEEEG
T ss_pred EcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc-hhheecCCCCCEEEEEEecCCCEE-EEEECCCeEEEEeC
Confidence 999999999999999 55689999999999999999876 577888999999999999998755 58999999999998
Q ss_pred CCCeeeEe----------------------------------------------------------ecCCeEEEEEeCCC
Q 044075 625 SQYSCARI----------------------------------------------------------SKGGTVQVRFQPRL 646 (786)
Q Consensus 625 ~~~~~~~~----------------------------------------------------------~~~~i~~i~~sp~g 646 (786)
.++..... +...+.+++|+|++
T Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~ 852 (1249)
T 3sfz_A 773 RSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD 852 (1249)
T ss_dssp GGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST
T ss_pred CCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC
Confidence 76543221 12456778999999
Q ss_pred CEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe-----------------
Q 044075 647 GLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE----------------- 708 (786)
Q Consensus 647 ~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~----------------- 708 (786)
..+++++.++.|++||+.++..+..+.+|...|.+++|+|++.+|++++.| .|++||+.+..
T Consensus 853 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~ 932 (1249)
T 3sfz_A 853 HLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQE 932 (1249)
T ss_dssp TEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEET
T ss_pred CEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcC
Confidence 999999999999999999999999999999999999999999999999999 99999975310
Q ss_pred ------------eEEE--------EccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEc
Q 044075 709 ------------CIHE--------LSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQS 767 (786)
Q Consensus 709 ------------~i~~--------l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafs 767 (786)
.+.. ...+...+.+++|+|++.++++++.+|.|++||+.+++.. .+.+|...|++++|+
T Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s 1012 (1249)
T 3sfz_A 933 NETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFT 1012 (1249)
T ss_dssp TEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEEC
T ss_pred CCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEEC
Confidence 0000 0123467899999999999999999999999999988766 566899999999999
Q ss_pred CCCCEEEEEeCCCcEEEeC
Q 044075 768 PVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 768 pdg~~LaSgs~DG~I~IWd 786 (786)
|++++|++++.||.|++||
T Consensus 1013 ~dg~~l~s~~~dg~i~vwd 1031 (1249)
T 3sfz_A 1013 ADGKTLISSSEDSVIQVWN 1031 (1249)
T ss_dssp SSSSCEEEECSSSBEEEEE
T ss_pred CCCCEEEEEcCCCEEEEEE
Confidence 9999999999999999996
No 74
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.5e-32 Score=325.82 Aligned_cols=286 Identities=20% Similarity=0.321 Sum_probs=252.1
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
..+..+.+|.+.|++++|+|++++|++|+.||.|+|||+.+++.+..+..|...|++++|+|++.+|++++.||.|++||
T Consensus 46 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 46 VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEE
Confidence 46678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec----CCeEEEEEeC--CCCEEEEEE
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK----GGTVQVRFQP--RLGLLLAAA 653 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----~~i~~i~~sp--~g~~Ll~gs 653 (786)
+.++......+.+|...|.+++|+|++..++++++.||.|++||+.......... ..+..++|+| ++.++++++
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 9987667788889999999999999555577799999999999998766544332 6788999999 999999999
Q ss_pred CCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCE-
Q 044075 654 SENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPT- 731 (786)
Q Consensus 654 ~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~- 731 (786)
.|+.|++||+++++.+..+.+|...|.+++|+|++.+|++++.| .|++||+.+++.+..+..+...+.+++|+|++..
T Consensus 206 ~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 206 DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence 99999999999999999999999999999999999999999998 9999999999999999999999999999999874
Q ss_pred EEEEECCCeEEEEECCCCe----------EEE----------------------------------EcccCCCeEEEEEc
Q 044075 732 LMVIGGYQSLELWNMAENK----------CMT----------------------------------IAAHDCVISALAQS 767 (786)
Q Consensus 732 L~sgs~dg~I~IwDl~~~~----------~~~----------------------------------~~~h~~~V~slafs 767 (786)
+++++.++.+.+|++.... .+. ...+...+.+++|+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 365 (814)
T 3mkq_A 286 YIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHS 365 (814)
T ss_dssp EEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEEC
T ss_pred EEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEEC
Confidence 3556667788888876432 111 12344567899999
Q ss_pred CCCCEEEEEeCCCcEEEeC
Q 044075 768 PVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 768 pdg~~LaSgs~DG~I~IWd 786 (786)
|++++|++++ ||.+.||+
T Consensus 366 pdg~~la~~~-~~~~~i~~ 383 (814)
T 3mkq_A 366 PNGRFVTVVG-DGEYVIYT 383 (814)
T ss_dssp TTSSEEEEEE-TTEEEEEE
T ss_pred CCCCEEEEec-CCEEEEEE
Confidence 9999999888 88999885
No 75
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.8e-33 Score=298.39 Aligned_cols=244 Identities=18% Similarity=0.298 Sum_probs=203.9
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe--eeeecCCCCCCeEEEEEcc--CCCEEEEEeCCCcEEEEc
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ--TECTPDDHNHIITDVRFRP--NSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~--~~~~l~~h~~~V~sl~fsp--dg~~Lasgs~Dg~I~VWd 579 (786)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++. .+..+.+|...|++++|++ ++++|++|+.|++|+|||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456899999999999999999999999999999998764 4677899999999999986 488999999999999999
Q ss_pred CCCCc-ceeeeecCCCCCeEEEEEecCC-CeEEEEEcCCCcEEEEeCCCCeee---E---eecCCeEEEEEeCC------
Q 044075 580 AAKPN-FCLQTYTGHNNHVMSLDFHPKK-NDLFCSCDGNSEIRFWNLSQYSCA---R---ISKGGTVQVRFQPR------ 645 (786)
Q Consensus 580 l~s~~-~~~~~~~~h~~~V~sl~~sp~g-~~ll~sgs~Dg~I~iwDl~~~~~~---~---~~~~~i~~i~~sp~------ 645 (786)
++++. .....+.+|...|.+++|+|+. ..++++++.|+.|++||++..... . .+...+.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 98764 2456678899999999999983 456679999999999999875321 2 22356778899887
Q ss_pred -----------CCEEEEEECCCeEEEEEcCCC---cEEEEEecCCCCEEEEEEcCCC----CEEEEEeCC-eEEEEECCC
Q 044075 646 -----------LGLLLAAASENVVSIFDVETD---RLTHSFKGHSTEIHSVCWDTNG----EYLASVSQD-SVRVWSLAS 706 (786)
Q Consensus 646 -----------g~~Ll~gs~dg~I~iwD~~t~---~~i~~l~~h~~~I~sv~~spdg----~~Lasgs~D-~I~vwDl~s 706 (786)
+.+|++++.|+.|++||++.. +.+..+.+|...|.+++|+|++ .+|++++.| +|+|||+.+
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 468999999999999999865 4677788999999999999986 899999999 999999976
Q ss_pred C---e-eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 707 G---E-CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 707 ~---~-~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
. . ....+..|...|.+++|+|++.+|++++.|+.|+||+..
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 248 ASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp TTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 2 1 223445678899999999999999999999999999975
No 76
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-32 Score=331.28 Aligned_cols=276 Identities=14% Similarity=0.174 Sum_probs=224.6
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC 586 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~ 586 (786)
.|...|.+++|+| |++|++++.|++|+|||+.+++.+..+. |...|++++|+|++++|++|+.||+|++||+++....
T Consensus 56 ~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 56 EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS 133 (902)
T ss_dssp SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 4788999999999 8899999999999999999999888885 6689999999999999999999999999999886531
Q ss_pred e----------eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---------------------C
Q 044075 587 L----------QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---------------------G 635 (786)
Q Consensus 587 ~----------~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---------------------~ 635 (786)
. ..+.+|.+.|.+++|+|++..++++++.|+.| +||+++.+++..+. .
T Consensus 134 ~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~ 212 (902)
T 2oaj_A 134 SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTP 212 (902)
T ss_dssp EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCC
T ss_pred cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCC
Confidence 1 23467999999999999876777899999999 99999988776554 4
Q ss_pred CeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEE--Ee---c-------------CCCCEEEEEE-------------
Q 044075 636 GTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHS--FK---G-------------HSTEIHSVCW------------- 684 (786)
Q Consensus 636 ~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~--l~---~-------------h~~~I~sv~~------------- 684 (786)
.+.+++|+|++.+|++++.|+.|++||+++++++.. +. . |...|.+++|
T Consensus 213 ~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~ 292 (902)
T 2oaj_A 213 KVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLI 292 (902)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEE
T ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEE
Confidence 489999999999999999999999999977654432 10 0 1112333322
Q ss_pred --------------------------------------------------------------------------------
Q 044075 685 -------------------------------------------------------------------------------- 684 (786)
Q Consensus 685 -------------------------------------------------------------------------------- 684 (786)
T Consensus 293 sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~ 372 (902)
T 2oaj_A 293 SHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILG 372 (902)
T ss_dssp EEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEET
T ss_pred eCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcC
Confidence
Q ss_pred -----------------------------------------------------------------------cCCCCEEEE
Q 044075 685 -----------------------------------------------------------------------DTNGEYLAS 693 (786)
Q Consensus 685 -----------------------------------------------------------------------spdg~~Las 693 (786)
+|++++|++
T Consensus 373 dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laS 452 (902)
T 2oaj_A 373 NGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFIT 452 (902)
T ss_dssp TSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEE
T ss_pred CCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEE
Confidence 244556667
Q ss_pred EeCC-eEEEEECCCCeeE----EE--Ec-----cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe-----------
Q 044075 694 VSQD-SVRVWSLASGECI----HE--LS-----SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK----------- 750 (786)
Q Consensus 694 gs~D-~I~vwDl~s~~~i----~~--l~-----~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~----------- 750 (786)
|+.| +|++||+.++... .. +. .|...|.+++|+|++++|++++.|++|+|||+.+++
T Consensus 453 gs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~ 532 (902)
T 2oaj_A 453 GHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESG 532 (902)
T ss_dssp EETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC----------
T ss_pred ecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCc
Confidence 7777 7777777655311 11 11 567789999999999999999999999999997652
Q ss_pred -----------------------------------EEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 751 -----------------------------------CMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 751 -----------------------------------~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
...+.+|.+.|++|+|+||| +||+|+.|++|+|||
T Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd 602 (902)
T 2oaj_A 533 DLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLID 602 (902)
T ss_dssp -----CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEE
T ss_pred ccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEE
Confidence 23566899999999999999 999999999999997
No 77
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.1e-31 Score=281.28 Aligned_cols=288 Identities=18% Similarity=0.300 Sum_probs=244.2
Q ss_pred ccccccccCCC--cceeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECC
Q 044075 453 HFGDIGSLDDN--VESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHD 530 (786)
Q Consensus 453 ~~~~v~sld~~--~~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~D 530 (786)
|.+.|.++..+ ...++.....|+...++.+..... ....+...+++|...|.+++|+|++++|++|+.|
T Consensus 37 H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~---------~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 37 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET---------NYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSS---------CSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc---------ccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 33444444443 234666667788888887654321 1234567889999999999999999999999999
Q ss_pred CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCC-eE
Q 044075 531 KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKN-DL 609 (786)
Q Consensus 531 g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~-~l 609 (786)
+.|++|+............+...+..+.+++++.+|++++.|+.+++||+...........+|...|.+++|++++. .+
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 99999999999999999999999999999999999999999999999999887666667788999999999998764 46
Q ss_pred EEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcC
Q 044075 610 FCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDT 686 (786)
Q Consensus 610 l~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~sp 686 (786)
+++++.|+.|++||+++.+....+. ..+.+++|+|++.+|++++.|+.|++||+++.+.+..+. +...|.+++|+|
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~ 266 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD-GGDIINALCFSP 266 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-CSSCEEEEEECS
T ss_pred EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec-CCceEEeeecCC
Confidence 7789999999999999988876654 678999999999999999999999999999999998888 456899999999
Q ss_pred CCCEEEEEeCCeEEEEECCCCeeEEEEc---------cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe
Q 044075 687 NGEYLASVSQDSVRVWSLASGECIHELS---------SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK 750 (786)
Q Consensus 687 dg~~Lasgs~D~I~vwDl~s~~~i~~l~---------~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~ 750 (786)
++.+++++.++.|+|||++++..+..+. .|...|++++|+|++++|++++.||.|+|||+.+|+
T Consensus 267 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 267 NRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp SSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 9887777665599999999988776654 567889999999999999999999999999998875
No 78
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.6e-32 Score=302.12 Aligned_cols=269 Identities=19% Similarity=0.369 Sum_probs=229.3
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe----
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ---- 542 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~---- 542 (786)
++...+.|+...++.... .+.+..+..|...|.+++|+|+|++|++|+.|+.|+|||+.+..
T Consensus 80 ~l~s~s~D~~v~iWd~~~--------------~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~ 145 (380)
T 3iz6_a 80 WIVSASQDGRLIVWNALT--------------SQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDG 145 (380)
T ss_dssp CEEEEETTSEEEEEETTT--------------TEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCC
T ss_pred EEEEEeCCCeEEEEECCC--------------CccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccC
Confidence 455555677777776432 24567888999999999999999999999999999999987532
Q ss_pred ---eeeecCCCCCCeEEEEEccC-CCEEEEEeCCCcEEEEcCCCCcceeeee-----cCCCCCeEEEEEecCCCeEEEEE
Q 044075 543 ---TECTPDDHNHIITDVRFRPN-STQLATSSFDKTVRIWDAAKPNFCLQTY-----TGHNNHVMSLDFHPKKNDLFCSC 613 (786)
Q Consensus 543 ---~~~~l~~h~~~V~sl~fspd-g~~Lasgs~Dg~I~VWdl~s~~~~~~~~-----~~h~~~V~sl~~sp~g~~ll~sg 613 (786)
....+.+|...|.++.|+|+ +..|++|+.|++|++||+.++.. +..+ .+|...|.+++|++.+..+|++|
T Consensus 146 ~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 224 (380)
T 3iz6_a 146 NMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR-ISIFGSEFPSGHTADVLSLSINSLNANMFISG 224 (380)
T ss_dssp SSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE-EEEECCCSSSSCCSCEEEEEECSSSCCEEEEE
T ss_pred CccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE-EEEeecccCCCCccCeEEEEeecCCCCEEEEE
Confidence 34567899999999999996 45799999999999999998773 4444 67999999999998666788899
Q ss_pred cCCCcEEEEeCCC-CeeeEe---ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCC-------CCEEEE
Q 044075 614 DGNSEIRFWNLSQ-YSCARI---SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHS-------TEIHSV 682 (786)
Q Consensus 614 s~Dg~I~iwDl~~-~~~~~~---~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~-------~~I~sv 682 (786)
+.|+.|++||++. ...+.. +.+.+.+++|+|++.+|++++.|+.|++||++++..+..+..+. ..|.++
T Consensus 225 s~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~ 304 (380)
T 3iz6_a 225 SCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSV 304 (380)
T ss_dssp ETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEE
T ss_pred ECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEE
Confidence 9999999999974 344433 44678999999999999999999999999999999888876543 248999
Q ss_pred EEcCCCCEEEEEeCC-eEEEEECCCCeeEEEE----ccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe
Q 044075 683 CWDTNGEYLASVSQD-SVRVWSLASGECIHEL----SSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK 750 (786)
Q Consensus 683 ~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l----~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~ 750 (786)
+|+|+|++|++|+.| .|++||+..++.+..+ ..|...|.+++|+|++.+|++++.|+.|+||++...+
T Consensus 305 ~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 305 AFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 999999999999999 9999999999988887 6789999999999999999999999999999987643
No 79
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.3e-31 Score=316.39 Aligned_cols=273 Identities=18% Similarity=0.304 Sum_probs=231.5
Q ss_pred eeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee
Q 044075 466 SFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC 545 (786)
Q Consensus 466 ~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~ 545 (786)
.++.....|+...++.+..... ..-.....+.+|...|+|++|+|++++|++|+.||+|+|||+.++..+.
T Consensus 396 ~~l~s~s~D~~i~~W~~~~~~~---------~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~ 466 (694)
T 3dm0_A 396 DIIVSASRDKSIILWKLTKDDK---------AYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTR 466 (694)
T ss_dssp SEEEEEETTSEEEEEECCCSTT---------CSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CEEEEEeCCCcEEEEEccCCCc---------ccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCccee
Confidence 4566666778888887653211 1123456788999999999999999999999999999999999999999
Q ss_pred ecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee--eeecCCCCCeEEEEEecCCC-eEEEEEcCCCcEEEE
Q 044075 546 TPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL--QTYTGHNNHVMSLDFHPKKN-DLFCSCDGNSEIRFW 622 (786)
Q Consensus 546 ~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~--~~~~~h~~~V~sl~~sp~g~-~ll~sgs~Dg~I~iw 622 (786)
.+.+|...|++++|+|++++|++|+.|++|+|||+....... ....+|...|.+++|+|++. .++++++.|+.|++|
T Consensus 467 ~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vw 546 (694)
T 3dm0_A 467 RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 546 (694)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEE
T ss_pred EEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEE
Confidence 999999999999999999999999999999999986543211 11247889999999999873 467799999999999
Q ss_pred eCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeE
Q 044075 623 NLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSV 699 (786)
Q Consensus 623 Dl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I 699 (786)
|+++.++...+. +.+.+++|+|++.+|++++.|+.|++||+++++.+..+. +...|.+++|+|++.+|++++++.|
T Consensus 547 d~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~i 625 (694)
T 3dm0_A 547 NLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVIHALCFSPNRYWLCAATEHGI 625 (694)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSSCEEEEEECSSSSEEEEEETTEE
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCCcEEEEEEcCCCcEEEEEcCCCE
Confidence 999887766544 678999999999999999999999999999999888776 5568999999999999998887799
Q ss_pred EEEECCCCeeEEEEccCC-------------------CceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 700 RVWSLASGECIHELSSSG-------------------NKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 700 ~vwDl~s~~~i~~l~~~~-------------------~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
+|||+++++++..+..+. ..+++++|+|++++|++++.||.|+|||+..
T Consensus 626 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 626 KIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp EEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 999999999888775431 1368899999999999999999999999853
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-31 Score=291.92 Aligned_cols=248 Identities=17% Similarity=0.274 Sum_probs=210.1
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcC--CCeeeeecCCCCCCeEEEEEccC--CCEEEEEeCCCcEE
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNME--NFQTECTPDDHNHIITDVRFRPN--STQLATSSFDKTVR 576 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~--t~~~~~~l~~h~~~V~sl~fspd--g~~Lasgs~Dg~I~ 576 (786)
.+..+.+|.+.|++++|+|++++||+|+.||.|+|||+. +.+.+..+..|...|++++|+++ +.+|++++.||.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 456788999999999999999999999999999999998 66777889999999999999977 89999999999999
Q ss_pred EEcCCCCcc-eeeeecCCCCCeEEEEEecC--CCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEE
Q 044075 577 IWDAAKPNF-CLQTYTGHNNHVMSLDFHPK--KNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAA 653 (786)
Q Consensus 577 VWdl~s~~~-~~~~~~~h~~~V~sl~~sp~--g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs 653 (786)
|||+.++.. ....+..|...|.+++|+|+ +. ++++++.|+.|++||++....
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~------------------------ 137 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGT------------------------ 137 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSC------------------------
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCc------------------------
Confidence 999988652 45667778899999999987 44 444777777777777765321
Q ss_pred CCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcC-------------CCCEEEEEeCC-eEEEEECCCCe----eEEEEcc
Q 044075 654 SENVVSIFDVETDRLTHSFKGHSTEIHSVCWDT-------------NGEYLASVSQD-SVRVWSLASGE----CIHELSS 715 (786)
Q Consensus 654 ~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~sp-------------dg~~Lasgs~D-~I~vwDl~s~~----~i~~l~~ 715 (786)
.....+..|...|.+++|+| ++.+|++++.| .|++||++++. ++..+..
T Consensus 138 -------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 138 -------------TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp -------------CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred -------------eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec
Confidence 11223456889999999999 69999999999 99999998764 5567888
Q ss_pred CCCceEEEEEeCC---CCEEEEEECCCeEEEEECCCCe----EEE--EcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 716 SGNKFHSCIFHPS---YPTLMVIGGYQSLELWNMAENK----CMT--IAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 716 ~~~~I~sv~fspd---g~~L~sgs~dg~I~IwDl~~~~----~~~--~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|...|.+++|+|+ +.+|++++.|+.|++||+.++. ... ...|...|++++|+|++.+|++++.||.|+|||
T Consensus 205 h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 205 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 9999999999999 8999999999999999999863 222 234889999999999999999999999999996
No 81
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.5e-31 Score=294.58 Aligned_cols=282 Identities=18% Similarity=0.182 Sum_probs=239.9
Q ss_pred ccccCCCcceeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCC----C---CEEEEEEC
Q 044075 457 IGSLDDNVESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSD----G---KLLASAGH 529 (786)
Q Consensus 457 v~sld~~~~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpd----g---~~Lasgs~ 529 (786)
+.++..+. .++.....++...++.+..... ...+..+..+.+|...|++++|+|+ + ++|++++.
T Consensus 19 i~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~--------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~ 89 (397)
T 1sq9_A 19 IFSVSACN-SFTVSCSGDGYLKVWDNKLLDN--------ENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF 89 (397)
T ss_dssp EEEEEECS-SEEEEEETTSEEEEEESBCCTT--------CCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred eEEEEecC-CeEEEEcCCCEEEEEECCCccc--------ccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcC
Confidence 33333333 4566666788888887654321 1124567788899999999999999 9 99999999
Q ss_pred CCeEEEEEcCCCee-----eeecCCC-----CCCeEEEEEc----cCCCE-EEEEeCCCcEEEEcCCC------Ccceee
Q 044075 530 DKKVVVWNMENFQT-----ECTPDDH-----NHIITDVRFR----PNSTQ-LATSSFDKTVRIWDAAK------PNFCLQ 588 (786)
Q Consensus 530 Dg~V~IWdl~t~~~-----~~~l~~h-----~~~V~sl~fs----pdg~~-Lasgs~Dg~I~VWdl~s------~~~~~~ 588 (786)
||.|++||+.+++. ...+..| ...|.+++|+ |++.+ |++++.||.|++||+.+ ... +.
T Consensus 90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~ 168 (397)
T 1sq9_A 90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT-LN 168 (397)
T ss_dssp TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT-TC
T ss_pred CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce-ee
Confidence 99999999998886 8888888 5899999999 99999 99999999999999987 442 33
Q ss_pred -----ee-------cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee---------cCCeEEEEEeCCCC
Q 044075 589 -----TY-------TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS---------KGGTVQVRFQPRLG 647 (786)
Q Consensus 589 -----~~-------~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~---------~~~i~~i~~sp~g~ 647 (786)
.+ ..|...|.+++|+|++ ++++++.|+.|++||+++.+.+..+ ...+.+++|+|++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~ 246 (397)
T 1sq9_A 169 WSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS 246 (397)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT
T ss_pred ccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCC
Confidence 44 4588999999999998 6679999999999999988776554 45688999999999
Q ss_pred EEEEEECC---CeEEEEEcCCCcEEEEEec-------------CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeE
Q 044075 648 LLLAAASE---NVVSIFDVETDRLTHSFKG-------------HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECI 710 (786)
Q Consensus 648 ~Ll~gs~d---g~I~iwD~~t~~~i~~l~~-------------h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i 710 (786)
+|++++.| +.|++||+++++.+..+.. |...|.+++|+|++++|++++.| .|+|||+++++++
T Consensus 247 ~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 247 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERI 326 (397)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCcee
Confidence 99999999 9999999999999999998 99999999999999999999999 9999999999999
Q ss_pred EEEc------cC---------------CCceEEEEEeCCC----------CEEEEEECCCeEEEEECCCCe
Q 044075 711 HELS------SS---------------GNKFHSCIFHPSY----------PTLMVIGGYQSLELWNMAENK 750 (786)
Q Consensus 711 ~~l~------~~---------------~~~I~sv~fspdg----------~~L~sgs~dg~I~IwDl~~~~ 750 (786)
..+. .| ...|.+++|+|++ .+|++++.|+.|++||+.+++
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 327 TTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred EEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 9998 77 8999999999998 799999999999999998763
No 82
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-31 Score=328.36 Aligned_cols=281 Identities=11% Similarity=0.062 Sum_probs=221.5
Q ss_pred EeecCCCCeEEEEEcCC-CCEEEEEECCCeEEEEEcCCCeeeeecCCC------------------CCCeEEEEEccCCC
Q 044075 504 SIRKSSSKVTCCHFSSD-GKLLASAGHDKKVVVWNMENFQTECTPDDH------------------NHIITDVRFRPNST 564 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpd-g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h------------------~~~V~sl~fspdg~ 564 (786)
.+++|.+.|++++|+|+ +..|++|+.||.| |||+.+++.+..+..| ...|++++|+|++.
T Consensus 146 ~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~ 224 (902)
T 2oaj_A 146 FPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL 224 (902)
T ss_dssp CSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS
T ss_pred ccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC
Confidence 45789999999999995 5789999999999 9999999988887665 57899999999999
Q ss_pred EEEEEeCCCcEEEEcCCCCcceee-ee---c-------------CCCCCeEEEEEec----CCCeEEEEEcCC-------
Q 044075 565 QLATSSFDKTVRIWDAAKPNFCLQ-TY---T-------------GHNNHVMSLDFHP----KKNDLFCSCDGN------- 616 (786)
Q Consensus 565 ~Lasgs~Dg~I~VWdl~s~~~~~~-~~---~-------------~h~~~V~sl~~sp----~g~~ll~sgs~D------- 616 (786)
+|++++.||+|++||+++++.... .+ . .|...|.+++|++ ++..++++++.|
T Consensus 225 ~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~ 304 (902)
T 2oaj_A 225 HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQS 304 (902)
T ss_dssp EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCC
T ss_pred EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCce
Confidence 999999999999999988763221 12 1 1345799999964 333555555433
Q ss_pred ---------------------------------------------------------------------CcEEEEeCCCC
Q 044075 617 ---------------------------------------------------------------------SEIRFWNLSQY 627 (786)
Q Consensus 617 ---------------------------------------------------------------------g~I~iwDl~~~ 627 (786)
+.|++||+.++
T Consensus 305 v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g 384 (902)
T 2oaj_A 305 LTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSG 384 (902)
T ss_dssp EEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTC
T ss_pred EEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCC
Confidence 33444444322
Q ss_pred eeeEe----------ecCCeE----------------------------------EEEEeCCCCEEEEEECCCeEEEEEc
Q 044075 628 SCARI----------SKGGTV----------------------------------QVRFQPRLGLLLAAASENVVSIFDV 663 (786)
Q Consensus 628 ~~~~~----------~~~~i~----------------------------------~i~~sp~g~~Ll~gs~dg~I~iwD~ 663 (786)
..... +...+. .++|+|++..|++++.|++|++||+
T Consensus 385 ~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~ 464 (902)
T 2oaj_A 385 IFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDA 464 (902)
T ss_dssp CEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEES
T ss_pred CcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEEC
Confidence 11100 001122 2345688899999999999999999
Q ss_pred CCCcEE----EE--Ee-----cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC------------------------
Q 044075 664 ETDRLT----HS--FK-----GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG------------------------ 707 (786)
Q Consensus 664 ~t~~~i----~~--l~-----~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~------------------------ 707 (786)
.++... .. +. +|...|.+|+|+|++++|++|+.| +|+|||+.++
T Consensus 465 ~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (902)
T 2oaj_A 465 SHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLN 544 (902)
T ss_dssp SCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGG
T ss_pred CCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeecccc
Confidence 877421 11 11 788999999999999999999999 9999999765
Q ss_pred ---------------------eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEE------E-cccCC
Q 044075 708 ---------------------ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMT------I-AAHDC 759 (786)
Q Consensus 708 ---------------------~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~------~-~~h~~ 759 (786)
+++..+..|.+.|++++|+|+| +|++++.|++|+|||+++...+. + .+|.+
T Consensus 545 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~ 623 (902)
T 2oaj_A 545 NTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSA 623 (902)
T ss_dssp GSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCC
T ss_pred CCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhcccccc
Confidence 2477888899999999999999 99999999999999998887652 2 27889
Q ss_pred CeEEEEEc-----CCC---CEEEEEeCCCcEEEeC
Q 044075 760 VISALAQS-----PVT---GMVASASHDKSVKIWK 786 (786)
Q Consensus 760 ~V~slafs-----pdg---~~LaSgs~DG~I~IWd 786 (786)
.|++|+|+ ||| .+|++|+.||+|++||
T Consensus 624 ~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd 658 (902)
T 2oaj_A 624 CVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYK 658 (902)
T ss_dssp CEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEE
T ss_pred ceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEE
Confidence 99999999 886 7999999999999996
No 83
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.7e-32 Score=298.68 Aligned_cols=275 Identities=15% Similarity=0.235 Sum_probs=232.7
Q ss_pred CCeEEEEEcCCCCEE-EEEECCCeEEEEEcCCCe----eeeecCCCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEcCCCC
Q 044075 510 SKVTCCHFSSDGKLL-ASAGHDKKVVVWNMENFQ----TECTPDDHNHIITDVRFRP-NSTQLATSSFDKTVRIWDAAKP 583 (786)
Q Consensus 510 ~~V~~lafSpdg~~L-asgs~Dg~V~IWdl~t~~----~~~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s~ 583 (786)
....+++++|+...+ ++++.||.|+||++.+.. ....+.+|...|++++|+| ++.+|++|+.||+|+|||+.++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 345578899876544 457889999999997642 3456788999999999999 9999999999999999999886
Q ss_pred c------ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee-----cCCeEEEEEeCCCCEEEEE
Q 044075 584 N------FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS-----KGGTVQVRFQPRLGLLLAA 652 (786)
Q Consensus 584 ~------~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~-----~~~i~~i~~sp~g~~Ll~g 652 (786)
. ..+..+.+|...|.+++|+|++..++++++.|+.|++||+++++.+..+ ...+.+++|+|++..|+++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 3 3567788999999999999998778889999999999999998887665 3678999999999999999
Q ss_pred ECCCeEEEEEcCCCcEEEEE-ecCCCC-EEEEEEcCCCCEEEEE---eCC-eEEEEECCCCee-EEEEc-cCCCceEEEE
Q 044075 653 ASENVVSIFDVETDRLTHSF-KGHSTE-IHSVCWDTNGEYLASV---SQD-SVRVWSLASGEC-IHELS-SSGNKFHSCI 724 (786)
Q Consensus 653 s~dg~I~iwD~~t~~~i~~l-~~h~~~-I~sv~~spdg~~Lasg---s~D-~I~vwDl~s~~~-i~~l~-~~~~~I~sv~ 724 (786)
+.|+.|++||+++++.+..+ ..|... +.+++|+|++.+|+++ +.| .|++||+++++. +.... .+...+.+++
T Consensus 195 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 195 CRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred ecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEE
Confidence 99999999999999999988 678776 8999999999999999 677 999999998654 32322 4667899999
Q ss_pred EeCCCCEEEEEE-CCCeEEEEECCCCe--EEEEc--ccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 725 FHPSYPTLMVIG-GYQSLELWNMAENK--CMTIA--AHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 725 fspdg~~L~sgs-~dg~I~IwDl~~~~--~~~~~--~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|+|++.+|++++ .|+.|++||+.+++ ...+. .|...|.+++|+|++.++++ .|+.+++|+
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~ 339 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYK 339 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEE
T ss_pred EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEE
Confidence 999999997666 69999999999877 33333 35699999999999998875 567999995
No 84
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.9e-32 Score=292.14 Aligned_cols=241 Identities=17% Similarity=0.313 Sum_probs=201.7
Q ss_pred ecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc-eeeeecCCCCCeEEEEEecC-CCeEEEEEcCCCcEEEEe
Q 044075 546 TPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF-CLQTYTGHNNHVMSLDFHPK-KNDLFCSCDGNSEIRFWN 623 (786)
Q Consensus 546 ~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~-~~~~~~~h~~~V~sl~~sp~-g~~ll~sgs~Dg~I~iwD 623 (786)
.+.+|.+.|++++|+|++++|++|+.|++|+|||+.++.. .+..+.+|...|.+++|++. ...+|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 4568999999999999999999999999999999987642 46678899999999999753 344666999999999999
Q ss_pred CCCCe--eeEe---ecCCeEEEEEeCC--CCEEEEEECCCeEEEEEcCCCcE---EEEEecCCCCEEEEEEcCC------
Q 044075 624 LSQYS--CARI---SKGGTVQVRFQPR--LGLLLAAASENVVSIFDVETDRL---THSFKGHSTEIHSVCWDTN------ 687 (786)
Q Consensus 624 l~~~~--~~~~---~~~~i~~i~~sp~--g~~Ll~gs~dg~I~iwD~~t~~~---i~~l~~h~~~I~sv~~spd------ 687 (786)
++++. .... +...+.+++|+|+ +.+|++++.|+.|++||++.... ...+.+|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 98763 3332 3467899999998 78999999999999999987632 3445679999999999997
Q ss_pred -----------CCEEEEEeCC-eEEEEECCCC---eeEEEEccCCCceEEEEEeCCC----CEEEEEECCCeEEEEECCC
Q 044075 688 -----------GEYLASVSQD-SVRVWSLASG---ECIHELSSSGNKFHSCIFHPSY----PTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 688 -----------g~~Lasgs~D-~I~vwDl~s~---~~i~~l~~~~~~I~sv~fspdg----~~L~sgs~dg~I~IwDl~~ 748 (786)
+.+|++++.| +|+|||++.. +++..+..|...|.+++|+|++ .+|++++.|+.|+|||+.+
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 4789999999 9999999865 5677888999999999999986 7899999999999999976
Q ss_pred C---e--EEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 749 N---K--CMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 749 ~---~--~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
. . ...+..|...|++++|+|++.+|++++.||.|+||+
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~ 290 (316)
T 3bg1_A 248 ASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290 (316)
T ss_dssp TTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEE
T ss_pred ccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 2 1 224567899999999999999999999999999996
No 85
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.98 E-value=1.1e-30 Score=282.76 Aligned_cols=236 Identities=19% Similarity=0.343 Sum_probs=210.2
Q ss_pred CCCCeEEEEEcCC----CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEcCCC
Q 044075 508 SSSKVTCCHFSSD----GKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRP-NSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 508 H~~~V~~lafSpd----g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s 582 (786)
|...|++++|+|+ +.+|++|+.||.|+|||+.+++.+..+..|...|++++|+| ++.+|++++.||.|++||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 7789999999998 67999999999999999999999999999999999999999 899999999999999999998
Q ss_pred Ccceeeee---cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe---------------------------
Q 044075 583 PNFCLQTY---TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI--------------------------- 632 (786)
Q Consensus 583 ~~~~~~~~---~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~--------------------------- 632 (786)
++ ....+ ..|...|.+++|+|++..++ +++.||.|++||+++.+....
T Consensus 148 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (366)
T 3k26_A 148 DT-LVAIFGGVEGHRDEVLSADYDLLGEKIM-SCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 225 (366)
T ss_dssp TE-EEEEECSTTSCSSCEEEEEECTTSSEEE-EEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEE
T ss_pred Ce-EEEEecccccccCceeEEEECCCCCEEE-EecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccc
Confidence 76 45555 68999999999999887554 888899999999987653321
Q ss_pred ----ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcE--------------EEEEecCCCCEEEEEEcCC--CCEEE
Q 044075 633 ----SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRL--------------THSFKGHSTEIHSVCWDTN--GEYLA 692 (786)
Q Consensus 633 ----~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~--------------i~~l~~h~~~I~sv~~spd--g~~La 692 (786)
+...+.+++|+ +.++++++.|+.|++||+++... +..+..|...|.+++|+|+ +.+|+
T Consensus 226 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~ 303 (366)
T 3k26_A 226 TRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLA 303 (366)
T ss_dssp ECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEE
T ss_pred cccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEE
Confidence 45678889998 77999999999999999987643 7788889999999999999 99999
Q ss_pred EEeCC-eEEEEECCCCe----eEEEEccC--CCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 693 SVSQD-SVRVWSLASGE----CIHELSSS--GNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 693 sgs~D-~I~vwDl~s~~----~i~~l~~~--~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
+++.| .|++||+.+++ .+..+..| ...|.+++|+|++++|++++.||.|++||+.
T Consensus 304 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 304 LGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999 99999999875 45577777 7899999999999999999999999999985
No 86
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.98 E-value=5.2e-30 Score=271.66 Aligned_cols=264 Identities=14% Similarity=0.217 Sum_probs=225.2
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC---ee
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENF---QT 543 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~---~~ 543 (786)
++.....++...++.+.. ......+..|...|.+++|+|++++|++++.||.|++|++.+. +.
T Consensus 31 ~l~s~~~dg~v~vw~~~~--------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~ 96 (313)
T 3odt_A 31 KVASVSRDGTVRLWSKDD--------------QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDP 96 (313)
T ss_dssp EEEEEETTSEEEEEEESS--------------SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC
T ss_pred EEEEEEcCCcEEEEECCC--------------CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCc
Confidence 455555677777776532 2455677889999999999999999999999999999998754 56
Q ss_pred eeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEe
Q 044075 544 ECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWN 623 (786)
Q Consensus 544 ~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwD 623 (786)
...+..|...|.+++| ++++|++++.|+.|++|| . ......+..|...|.+++|+|....++++++.|+.|++||
T Consensus 97 ~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d 171 (313)
T 3odt_A 97 LYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--E-GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ 171 (313)
T ss_dssp -CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--T-TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred ccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--C-CcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe
Confidence 7778899999999999 577999999999999999 2 3357778889999999999994455666999999999999
Q ss_pred CCCCeeeEe--ecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEE
Q 044075 624 LSQYSCARI--SKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVR 700 (786)
Q Consensus 624 l~~~~~~~~--~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~ 700 (786)
......... ....+.+++|++++. +++++.|+.|++||+++++.+..+..|...|.+++|+|++ .|++++.| .|+
T Consensus 172 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~ 249 (313)
T 3odt_A 172 NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVR 249 (313)
T ss_dssp TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEE
T ss_pred cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEE
Confidence 544332222 446789999999988 9999999999999999999999999999999999999999 57788888 999
Q ss_pred EEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 701 VWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 701 vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
+||+++++++..+..|...|.+++|+|++. +++++.|+.|++||+.+++..
T Consensus 250 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 250 IWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp EECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCC
T ss_pred EEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCcee
Confidence 999999999999999999999999999998 678999999999999987654
No 87
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=6.6e-30 Score=284.25 Aligned_cols=241 Identities=16% Similarity=0.297 Sum_probs=212.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
|...|++++|+|++++|++|+.||.|+|||+.+++.+..+..|...|.+++|+ +.+|++++.||.|++||++......
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~ 210 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQI 210 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCccee
Confidence 89999999999999999999999999999999999999999999999999994 6799999999999999999766678
Q ss_pred eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee---cCCeEEEEEeCCCCEEEEEE---CCCeEEEE
Q 044075 588 QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS---KGGTVQVRFQPRLGLLLAAA---SENVVSIF 661 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~---~~~i~~i~~sp~g~~Ll~gs---~dg~I~iw 661 (786)
..+.+|...|.+++|+|++.. +++++.|+.|++||+++.+....+ ...+.+++|+|++..+++.+ .|+.|++|
T Consensus 211 ~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 211 GTLQGHSSEVCGLAWRSDGLQ-LASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp EEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred eEEcCCCCCeeEEEEcCCCCE-EEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 888999999999999998765 458899999999999988776554 36789999999876555543 59999999
Q ss_pred EcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEe--CC-eEEEEECCCCeeEE--EEccCCCceEEEEEeCCCCEEEEEE
Q 044075 662 DVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVS--QD-SVRVWSLASGECIH--ELSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 662 D~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs--~D-~I~vwDl~s~~~i~--~l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
|+++++.+..+. +...|.+++|+|++.+|++++ .| .|+|||+.+++... .+..|...|.+++|+|++.+|++++
T Consensus 290 d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 290 NAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEe
Confidence 999999998887 778899999999999999964 66 99999999975544 4678999999999999999999999
Q ss_pred CCCeEEEEECCCCeEE
Q 044075 737 GYQSLELWNMAENKCM 752 (786)
Q Consensus 737 ~dg~I~IwDl~~~~~~ 752 (786)
.||.|++||+.+++.+
T Consensus 369 ~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 369 SDENLKFWRVYDGDHV 384 (401)
T ss_dssp TTSEEEEEECCC----
T ss_pred CCCcEEEEECCCCccc
Confidence 9999999999988766
No 88
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.98 E-value=1.1e-29 Score=283.49 Aligned_cols=284 Identities=11% Similarity=0.121 Sum_probs=244.2
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee-----ecCCCCCCeEEEEEccCCCEEEEEeCCC
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC-----TPDDHNHIITDVRFRPNSTQLATSSFDK 573 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~-----~l~~h~~~V~sl~fspdg~~Lasgs~Dg 573 (786)
++.+..+..+. .+.+++|+|++.++++++.++.|++||+.+++... .+..|...|.+++|++++.++++++.|+
T Consensus 113 ~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~ 191 (433)
T 3bws_A 113 HRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQAN 191 (433)
T ss_dssp EEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGT
T ss_pred ceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCC
Confidence 34555555554 46699999988888888889999999999988887 4568899999999999999999999999
Q ss_pred cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEE
Q 044075 574 TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLA 651 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~ 651 (786)
.|++||+++++ ....+..|...+.+++|+|++..++++++.|+.|++||+++++.+..+. ..+..++|+|+++.+++
T Consensus 192 ~v~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 270 (433)
T 3bws_A 192 AVHVFDLKTLA-YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYI 270 (433)
T ss_dssp EEEEEETTTCC-EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEE
T ss_pred EEEEEECCCce-EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEE
Confidence 99999998876 4667778889999999999999998888889999999999988776654 45788999999999999
Q ss_pred EE--------CCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEE-EEEeCC-eEEEEECCCCeeEEEEccCCCceE
Q 044075 652 AA--------SENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYL-ASVSQD-SVRVWSLASGECIHELSSSGNKFH 721 (786)
Q Consensus 652 gs--------~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~L-asgs~D-~I~vwDl~s~~~i~~l~~~~~~I~ 721 (786)
++ .|+.|++||+++++.+..+. |...+.+++|+|+++++ ++++.+ .|++||+.+++.+..+. +...+.
T Consensus 271 ~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~ 348 (433)
T 3bws_A 271 AQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPN 348 (433)
T ss_dssp EEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEE
T ss_pred EECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCC
Confidence 88 48899999999998777664 56689999999999865 455666 99999999999888775 567899
Q ss_pred EEEEeCCCCEEEEEEC---------------CCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeC-CCcEEEe
Q 044075 722 SCIFHPSYPTLMVIGG---------------YQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASH-DKSVKIW 785 (786)
Q Consensus 722 sv~fspdg~~L~sgs~---------------dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~-DG~I~IW 785 (786)
+++|+|+++++++++. ||.|++||+.+++.+....+...+.+++|+|++++|++++. |+.|+||
T Consensus 349 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~ 428 (433)
T 3bws_A 349 TIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVY 428 (433)
T ss_dssp EEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEE
T ss_pred eEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEE
Confidence 9999999999998887 46999999999998876666778999999999999988875 9999999
Q ss_pred C
Q 044075 786 K 786 (786)
Q Consensus 786 d 786 (786)
+
T Consensus 429 ~ 429 (433)
T 3bws_A 429 R 429 (433)
T ss_dssp E
T ss_pred E
Confidence 6
No 89
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.3e-29 Score=272.45 Aligned_cols=267 Identities=11% Similarity=0.161 Sum_probs=231.9
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeee
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECT 546 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~ 546 (786)
++.....++...++.+.. .+.+..+.+|.+.|++++|+|++++|++++.||.|+|||+.+++.+..
T Consensus 46 ~l~~~~~dg~i~vwd~~~--------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 46 LLFSCSKDSSASVWYSLN--------------GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVAT 111 (369)
T ss_dssp EEEEEESSSCEEEEETTT--------------CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred EEEEEeCCCEEEEEeCCC--------------chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 344445566666665432 246678889999999999999999999999999999999999999888
Q ss_pred cCCCCCCeEEEEEccCCCEEEEEeCC-----CcEEEEcCCCCcc----------eeeeecCCCC--CeEEEEEecCCCeE
Q 044075 547 PDDHNHIITDVRFRPNSTQLATSSFD-----KTVRIWDAAKPNF----------CLQTYTGHNN--HVMSLDFHPKKNDL 609 (786)
Q Consensus 547 l~~h~~~V~sl~fspdg~~Lasgs~D-----g~I~VWdl~s~~~----------~~~~~~~h~~--~V~sl~~sp~g~~l 609 (786)
+. |...|.+++|+|++.+|++++.+ +.|++||+..... ....+..|.. .+.+++|+|++..+
T Consensus 112 ~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 190 (369)
T 3zwl_B 112 WK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYI 190 (369)
T ss_dssp EE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEE
T ss_pred ee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEE
Confidence 87 88899999999999999999999 9999999976542 2334455665 89999999988765
Q ss_pred EEEEcCCCcEEEEeCCC-CeeeEee---cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEc
Q 044075 610 FCSCDGNSEIRFWNLSQ-YSCARIS---KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWD 685 (786)
Q Consensus 610 l~sgs~Dg~I~iwDl~~-~~~~~~~---~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~s 685 (786)
+ +++.||.|++||+++ ......+ ...+.+++|+|++.+|++++.|+.|++||+++++.+..+. +...+.+++|+
T Consensus 191 ~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~ 268 (369)
T 3zwl_B 191 I-AGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVIT 268 (369)
T ss_dssp E-EEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEEC
T ss_pred E-EEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEec
Confidence 5 788899999999998 5655444 4678999999999999999999999999999999998888 88899999999
Q ss_pred CCCCEEEEEeCC---------------eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe
Q 044075 686 TNGEYLASVSQD---------------SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK 750 (786)
Q Consensus 686 pdg~~Lasgs~D---------------~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~ 750 (786)
|++.++++++.+ .|++||+.+++.+..+..|...|.+++|+|++++|++++.||.|+||++..+.
T Consensus 269 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 269 PLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp SSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred CCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 999999998865 59999999999999999999999999999999999999999999999997643
No 90
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.98 E-value=1.9e-30 Score=280.36 Aligned_cols=244 Identities=17% Similarity=0.329 Sum_probs=209.6
Q ss_pred cCCCCeEEEEEcCC---CCEEEEEECCCeEEEEEcCCCe-eeeecCCCCCCeEEEEE------ccCCCEEEEEeCCCcEE
Q 044075 507 KSSSKVTCCHFSSD---GKLLASAGHDKKVVVWNMENFQ-TECTPDDHNHIITDVRF------RPNSTQLATSSFDKTVR 576 (786)
Q Consensus 507 ~H~~~V~~lafSpd---g~~Lasgs~Dg~V~IWdl~t~~-~~~~l~~h~~~V~sl~f------spdg~~Lasgs~Dg~I~ 576 (786)
+|...|++++|+|+ +.+|++|+.||.|++||+.+++ .+..+..|...|.+++| +|++++|++++.|+.|+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 68999999999998 6999999999999999999888 88899999999999965 67899999999999999
Q ss_pred EEcCCCCcceeeeecCCCC----CeEEEE----EecCCCeEEEEEcCCCcEEEEeCCCCeeeEe--ecCCeEEEEEeC--
Q 044075 577 IWDAAKPNFCLQTYTGHNN----HVMSLD----FHPKKNDLFCSCDGNSEIRFWNLSQYSCARI--SKGGTVQVRFQP-- 644 (786)
Q Consensus 577 VWdl~s~~~~~~~~~~h~~----~V~sl~----~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~--~~~~i~~i~~sp-- 644 (786)
+||+.++......+..|.. .|.+++ |+|++. ++++++.|+.|++||+++.+.... +...+.+++|+|
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~ 221 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKD 221 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSS
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCC
Confidence 9999987655666665544 899998 567766 455888899999999999876543 347889999999
Q ss_pred -CCCEEEEEECCCeEEEEEcCCCcEEEEE-----ecCCCCEEEEEEcCCCC-EEEEEeCC-eEEEEECCCC---------
Q 044075 645 -RLGLLLAAASENVVSIFDVETDRLTHSF-----KGHSTEIHSVCWDTNGE-YLASVSQD-SVRVWSLASG--------- 707 (786)
Q Consensus 645 -~g~~Ll~gs~dg~I~iwD~~t~~~i~~l-----~~h~~~I~sv~~spdg~-~Lasgs~D-~I~vwDl~s~--------- 707 (786)
++..|++++.|+.|++||+++++.+..+ .+|...|.+++|+|++. +|++++.| .|++||++.+
T Consensus 222 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 301 (357)
T 3i2n_A 222 ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSE 301 (357)
T ss_dssp SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTT
T ss_pred CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCC
Confidence 9999999999999999999877544333 48999999999999998 89999999 9999999853
Q ss_pred ----------eeEEEEccCCCceEEEEEeCCCCEEE-EEECCCeEEEEECCCCeE
Q 044075 708 ----------ECIHELSSSGNKFHSCIFHPSYPTLM-VIGGYQSLELWNMAENKC 751 (786)
Q Consensus 708 ----------~~i~~l~~~~~~I~sv~fspdg~~L~-sgs~dg~I~IwDl~~~~~ 751 (786)
+++..+..|...|.+++|+|++++|+ +++.|+.|+|||+.+...
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 302 GIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp SCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred CCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 46778889999999999999999998 799999999999987653
No 91
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=1.5e-29 Score=283.43 Aligned_cols=247 Identities=16% Similarity=0.285 Sum_probs=217.4
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcC
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl 580 (786)
.+..+.+|...|+||+|+|+|++||+|+.||.|+|||+.+++.+..+.+|...|.+++|+ +.+|++|+.|+.+++||.
T Consensus 139 ~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~ 216 (420)
T 4gga_A 139 QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDV 216 (420)
T ss_dssp EEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEET
T ss_pred EEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeee
Confidence 334556788999999999999999999999999999999999999999999999998885 679999999999999999
Q ss_pred CCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee-------eEeecCCeEEEEEeCCCCEE-EEE
Q 044075 581 AKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC-------ARISKGGTVQVRFQPRLGLL-LAA 652 (786)
Q Consensus 581 ~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~-------~~~~~~~i~~i~~sp~g~~L-l~g 652 (786)
......+..+.+|...+.++.|+|++..++ +++.|+.|++|+...++. ...+...+.+++|+|.+..+ +++
T Consensus 217 ~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~-s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~ 295 (420)
T 4gga_A 217 RVAEHHVATLSGHSQEVCGLRWAPDGRHLA-SGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATG 295 (420)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEE-EEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEE
T ss_pred cccceeeEEecccccceeeeeecCCCCeee-eeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEE
Confidence 988777888999999999999999987654 888999999999986542 22344678999999977644 443
Q ss_pred --ECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEe--CC-eEEEEECCCCeeEEEEccCCCceEEEEEeC
Q 044075 653 --ASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVS--QD-SVRVWSLASGECIHELSSSGNKFHSCIFHP 727 (786)
Q Consensus 653 --s~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs--~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fsp 727 (786)
+.|+.|++||+.+++++..+.. ...+.++.|++++..+++++ .| .|+|||+.+++++.++.+|...|.+++|+|
T Consensus 296 ~gs~D~~I~iwd~~t~~~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~sp 374 (420)
T 4gga_A 296 GGTSDRHIRIWNVCSGACLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP 374 (420)
T ss_dssp ECTTTCEEEEEETTTTEEEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred eecCCCEEEEEeCCccccceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 3689999999999999988884 56799999999999998876 45 899999999999999999999999999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCeE
Q 044075 728 SYPTLMVIGGYQSLELWNMAENKC 751 (786)
Q Consensus 728 dg~~L~sgs~dg~I~IwDl~~~~~ 751 (786)
++.+|++++.|++|+|||+.+...
T Consensus 375 dg~~l~S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 375 DGATVASAAADETLRLWRCFELDP 398 (420)
T ss_dssp TSSCEEEEETTTEEEEECCSCSSC
T ss_pred CCCEEEEEecCCeEEEEECCCCCc
Confidence 999999999999999999976543
No 92
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=3.4e-30 Score=282.72 Aligned_cols=275 Identities=15% Similarity=0.199 Sum_probs=215.9
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEE-EEEeCCCcEEEEc
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQL-ATSSFDKTVRIWD 579 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~L-asgs~Dg~I~VWd 579 (786)
++..+..|.+.|+|++|+|||++||+|+.++ ++||++++++.......+ .+..++|.++++.+ ++++.|++|+|||
T Consensus 11 ~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp --------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred CccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 3445678999999999999999999998665 789999987776554433 47888999888877 5677789999999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC-eeeEeecCCeEEEEEeCCCCEEEE--EECCC
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY-SCARISKGGTVQVRFQPRLGLLLA--AASEN 656 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~-~~~~~~~~~i~~i~~sp~g~~Ll~--gs~dg 656 (786)
+.+++ ++..+. |...|.++.|+++. ++ ++ .|+.|++||+.+. +.+..+......+++++ ..+++ ++.+|
T Consensus 88 ~~~~~-~~~~~~-~~~~v~~v~~~~~~--~~-~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg~~~g 159 (355)
T 3vu4_A 88 DVKKQ-DVSRIK-VDAPVKDLFLSREF--IV-VS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNEFNLG 159 (355)
T ss_dssp TTTTE-EEEEEE-CSSCEEEEEECSSE--EE-EE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEESSCTT
T ss_pred CCCCc-EEEEEE-CCCceEEEEEcCCE--EE-EE-EcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEeCCCcCc
Confidence 99876 355554 66789999998652 33 33 3789999999987 55544444444566777 56666 47799
Q ss_pred eEEEEEcCCCc----------------EEEEEecCCCCEEEEEEcCCCCEEEEEeCC-e-EEEEECCCCeeEEEEc-c-C
Q 044075 657 VVSIFDVETDR----------------LTHSFKGHSTEIHSVCWDTNGEYLASVSQD-S-VRVWSLASGECIHELS-S-S 716 (786)
Q Consensus 657 ~I~iwD~~t~~----------------~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~-I~vwDl~s~~~i~~l~-~-~ 716 (786)
.|++||++++. .+..+.+|...|.+++|+|++++|++++.| + |+|||+++++++..+. + |
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h 239 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD 239 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 99999999865 267888999999999999999999999999 8 9999999999999998 4 8
Q ss_pred CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE---E--------------------Ec-ccCCCeEEEEEcCCCCE
Q 044075 717 GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM---T--------------------IA-AHDCVISALAQSPVTGM 772 (786)
Q Consensus 717 ~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~---~--------------------~~-~h~~~V~slafspdg~~ 772 (786)
...|.+++|+|++++|++++.|+.|+|||+...... . +. .+......++|++++++
T Consensus 240 ~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~ 319 (355)
T 3vu4_A 240 RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSL 319 (355)
T ss_dssp CSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEE
T ss_pred CCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCE
Confidence 999999999999999999999999999999765311 1 00 11223477999999999
Q ss_pred EEEEeCCCcEEEeC
Q 044075 773 VASASHDKSVKIWK 786 (786)
Q Consensus 773 LaSgs~DG~I~IWd 786 (786)
|++++.||.+++|+
T Consensus 320 l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 320 VVVWPHTRMIETFK 333 (355)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEEeCCCeEEEEE
Confidence 99999999999985
No 93
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=1.4e-29 Score=275.45 Aligned_cols=269 Identities=16% Similarity=0.188 Sum_probs=222.9
Q ss_pred EeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee--
Q 044075 468 LSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC-- 545 (786)
Q Consensus 468 l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~-- 545 (786)
+.....++...++.+... .++.+..+.+|...|++++|+|++++|++++.||.|++||+.+++...
T Consensus 23 l~~~~~d~~v~i~~~~~~------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 90 (372)
T 1k8k_C 23 IAICPNNHEVHIYEKSGN------------KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTL 90 (372)
T ss_dssp EEEECSSSEEEEEEEETT------------EEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred EEEEeCCCEEEEEeCCCC------------cEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeE
Confidence 334444566666654321 245778889999999999999999999999999999999998886544
Q ss_pred ecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc---eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEE
Q 044075 546 TPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF---CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFW 622 (786)
Q Consensus 546 ~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~---~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iw 622 (786)
.+..|...|++++|+|++++|++++.|+.|++||++.... .......|...|.+++|+|++..+ ++++.|+.|++|
T Consensus 91 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~~~ 169 (372)
T 1k8k_C 91 VILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLL-AAGSCDFKCRIF 169 (372)
T ss_dssp ECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEE-EEEETTSCEEEE
T ss_pred EeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEE-EEEcCCCCEEEE
Confidence 3477999999999999999999999999999999987663 233446789999999999987755 588889999999
Q ss_pred eCC------------------CCeeeEee---cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEE
Q 044075 623 NLS------------------QYSCARIS---KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHS 681 (786)
Q Consensus 623 Dl~------------------~~~~~~~~---~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~s 681 (786)
|++ .++.+..+ ...+.+++|+|++.+|++++.|+.|++||+++++.+..+..|...|.+
T Consensus 170 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~ 249 (372)
T 1k8k_C 170 SAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLA 249 (372)
T ss_dssp ECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEE
T ss_pred EcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEE
Confidence 964 45555544 367899999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCEEEEEeCCeEEEEECCC--Cee--------------------------------E------EEE-ccCCCce
Q 044075 682 VCWDTNGEYLASVSQDSVRVWSLAS--GEC--------------------------------I------HEL-SSSGNKF 720 (786)
Q Consensus 682 v~~spdg~~Lasgs~D~I~vwDl~s--~~~--------------------------------i------~~l-~~~~~~I 720 (786)
++|+|++.+|+++.++.|++||+.+ ++. . ..+ .+|...|
T Consensus 250 ~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 329 (372)
T 1k8k_C 250 VTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSV 329 (372)
T ss_dssp EEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCE
T ss_pred EEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCc
Confidence 9999999999988444999999987 421 0 223 3788999
Q ss_pred EEEEEe-CCC---CEEEEEECCCeEEEEECCCC
Q 044075 721 HSCIFH-PSY---PTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 721 ~sv~fs-pdg---~~L~sgs~dg~I~IwDl~~~ 749 (786)
.+++|+ +++ .+|++++.||.|++||+.++
T Consensus 330 ~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 330 SQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp EEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred ceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 999866 666 89999999999999998654
No 94
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=5.9e-30 Score=281.58 Aligned_cols=264 Identities=12% Similarity=0.140 Sum_probs=213.2
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcCCCeeee
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSS-DGKLLASAGHDKKVVVWNMENFQTEC 545 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t~~~~~ 545 (786)
++.....++...++.+... .......+.+|.+.|.+++|+| ++.+|++++.|+.|+|||+.+ ..+.
T Consensus 88 ~l~s~~~dg~i~iwd~~~~------------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~ 154 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQ------------NKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQ 154 (383)
T ss_dssp EEEEEEBTSCEEEEETTST------------TCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEE
T ss_pred EEEEEcCCCeEEEEeCCCc------------ccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceE
Confidence 5555555677777765422 1122233457999999999999 789999999999999999996 4444
Q ss_pred ecC---CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEE
Q 044075 546 TPD---DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFW 622 (786)
Q Consensus 546 ~l~---~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iw 622 (786)
.+. .|...|.+++|+|++++|++++.|+.|++||++ ++ .+..+.+|...|.+++|+|++..++++++.|+.|++|
T Consensus 155 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 232 (383)
T 3ei3_B 155 VFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH-EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLW 232 (383)
T ss_dssp EEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC-EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred EEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC-EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEE
Confidence 443 345889999999999999999999999999994 33 5778889999999999999998778899999999999
Q ss_pred eCCC----CeeeEe--ecCCeEEEEEeC-CCCEEEEEECCCeEEEEEcCCCcEEEEEecCC-----------------CC
Q 044075 623 NLSQ----YSCARI--SKGGTVQVRFQP-RLGLLLAAASENVVSIFDVETDRLTHSFKGHS-----------------TE 678 (786)
Q Consensus 623 Dl~~----~~~~~~--~~~~i~~i~~sp-~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~-----------------~~ 678 (786)
|+++ ..++.. +...+.+++|+| ++.+|++++.|+.|++||+++++....+..|. ..
T Consensus 233 d~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 312 (383)
T 3ei3_B 233 DLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYD 312 (383)
T ss_dssp EGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSS
T ss_pred eCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCC
Confidence 9987 444433 457889999999 99999999999999999999987766665443 23
Q ss_pred EEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC--CCceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 679 IHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS--GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 679 I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~--~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
+..++|+|++++ +++.| .|+|||+.+++++..+..+ ...+..++|+|++.+|++++ |+.|+|||+++
T Consensus 313 ~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 313 LIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred ceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 444566666665 55677 9999999999999999874 56677789999999999997 99999999875
No 95
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-29 Score=283.81 Aligned_cols=271 Identities=11% Similarity=0.155 Sum_probs=223.7
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe---eeeecC--------------------------------------
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ---TECTPD-------------------------------------- 548 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~---~~~~l~-------------------------------------- 548 (786)
.+|.|++|+++|++|+++ .++.|++||+.+++ .+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 468999999999977666 58899999999888 554443
Q ss_pred ----------------CCCCCeEEEEEccCCCEE-EEEeCCCcEEEEcCC--CCcceeeeec--CCCCCeEEEEEecCCC
Q 044075 549 ----------------DHNHIITDVRFRPNSTQL-ATSSFDKTVRIWDAA--KPNFCLQTYT--GHNNHVMSLDFHPKKN 607 (786)
Q Consensus 549 ----------------~h~~~V~sl~fspdg~~L-asgs~Dg~I~VWdl~--s~~~~~~~~~--~h~~~V~sl~~sp~g~ 607 (786)
.|...|++++|+|++++| ++++.||.|+|||+. ++. .+..+. .|...|.+++|+|++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN-VLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS-CEEEEEEEECSSCEEEEEECTTSS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc-eeeeeecccCCCCceEEEEcCCCC
Confidence 234479999999999996 889899999999998 655 455554 5778999999999987
Q ss_pred eEEEEEcCCCcEEEEeCCCCeee-------EeecCCeEEEEEeCC---CCEEEEEECCCeEEEEEcCCCcEEEE-EecCC
Q 044075 608 DLFCSCDGNSEIRFWNLSQYSCA-------RISKGGTVQVRFQPR---LGLLLAAASENVVSIFDVETDRLTHS-FKGHS 676 (786)
Q Consensus 608 ~ll~sgs~Dg~I~iwDl~~~~~~-------~~~~~~i~~i~~sp~---g~~Ll~gs~dg~I~iwD~~t~~~i~~-l~~h~ 676 (786)
.++ +++.+|.|++|++...... ..+...+.+++|+|+ +.+|++++.|+.|++||+++++.+.. +.+|.
T Consensus 163 ~l~-~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 163 TVI-IADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp EEE-EEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred EEE-EEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence 665 7888999999999876543 334578999999999 89999999999999999999988877 55899
Q ss_pred CCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc-------------------------CCCceEEEEEeCCCC
Q 044075 677 TEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS-------------------------SGNKFHSCIFHPSYP 730 (786)
Q Consensus 677 ~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~-------------------------~~~~I~sv~fspdg~ 730 (786)
..|.+++|+ ++++|++++.| .|+|||+++++++..+.. ....|.+++|+|+++
T Consensus 242 ~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 242 HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp SCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 999999999 99999999999 999999999998888762 235689999999999
Q ss_pred EEEEEE-CCCeEEEEEC--CCC---eEE-EEcccCCCeEEEEEcCCCCEEEEEeC-------CCcEEEeC
Q 044075 731 TLMVIG-GYQSLELWNM--AEN---KCM-TIAAHDCVISALAQSPVTGMVASASH-------DKSVKIWK 786 (786)
Q Consensus 731 ~L~sgs-~dg~I~IwDl--~~~---~~~-~~~~h~~~V~slafspdg~~LaSgs~-------DG~I~IWd 786 (786)
+|++++ .++.|+||++ ..+ ..+ .+..| ..|.+++|+|++ ++++++. +..|.||.
T Consensus 321 ~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~ 388 (450)
T 2vdu_B 321 FVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIE 388 (450)
T ss_dssp EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEE
T ss_pred EEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEE
Confidence 999999 8999999999 554 443 44556 889999999954 5555433 45578873
No 96
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5e-31 Score=295.47 Aligned_cols=261 Identities=16% Similarity=0.217 Sum_probs=216.5
Q ss_pred EcCCCCEEEEEECCCeEEEEEcCCCeeeeec-CCCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEcCCC---Ccce-eeee
Q 044075 517 FSSDGKLLASAGHDKKVVVWNMENFQTECTP-DDHNHIITDVRFRP-NSTQLATSSFDKTVRIWDAAK---PNFC-LQTY 590 (786)
Q Consensus 517 fSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l-~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s---~~~~-~~~~ 590 (786)
|+|++..+++++ +|+ .+++.+..+ .+|.+.|++++|+| ++.+|++|+.||+|+|||+.+ +... ....
T Consensus 35 f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~ 107 (437)
T 3gre_A 35 FGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLT 107 (437)
T ss_dssp GCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEE
T ss_pred cCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeee
Confidence 677787777654 487 456777788 89999999999999 999999999999999999876 3211 1222
Q ss_pred cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC---CCeeeEee---------------cCCeEEEE--EeCCCCEEE
Q 044075 591 TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS---QYSCARIS---------------KGGTVQVR--FQPRLGLLL 650 (786)
Q Consensus 591 ~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~---~~~~~~~~---------------~~~i~~i~--~sp~g~~Ll 650 (786)
..|...|.+++|+|++..+ ++++.||.|++||+. .++..... ...+.++. +++++..|+
T Consensus 108 ~~h~~~v~~~~~~~~~~~l-~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (437)
T 3gre_A 108 YDCSSTVTQITMIPNFDAF-AVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLV 186 (437)
T ss_dssp EECSSCEEEEEECTTSSEE-EEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEE
T ss_pred ccCCCCEEEEEEeCCCCEE-EEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEE
Confidence 2589999999999987754 589999999999995 33333221 23344444 567899999
Q ss_pred EEECCCeEEEEEcCCCcEEEEEec--CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEc-cCCCceEEEEEe
Q 044075 651 AAASENVVSIFDVETDRLTHSFKG--HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELS-SSGNKFHSCIFH 726 (786)
Q Consensus 651 ~gs~dg~I~iwD~~t~~~i~~l~~--h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~-~~~~~I~sv~fs 726 (786)
+++.|+.|++||+++++.+..+.. |...|.+++|+|++.+|++++.| .|++||+++++++..+. .+...|.+++|+
T Consensus 187 ~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~ 266 (437)
T 3gre_A 187 ALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVC 266 (437)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEEC
T ss_pred EEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEec
Confidence 999999999999999999999998 88999999999999999999999 99999999999999886 677899999666
Q ss_pred C----CCCEEEEEECCCeEEEEECCCCeEEEE-cc--------------------------cCCCeEEEEEcCCCCEEEE
Q 044075 727 P----SYPTLMVIGGYQSLELWNMAENKCMTI-AA--------------------------HDCVISALAQSPVTGMVAS 775 (786)
Q Consensus 727 p----dg~~L~sgs~dg~I~IwDl~~~~~~~~-~~--------------------------h~~~V~slafspdg~~LaS 775 (786)
| ++.+|++++.|+.|++||+.+++++.. .. |...|++++|+ ++.+|++
T Consensus 267 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s 345 (437)
T 3gre_A 267 QFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLT 345 (437)
T ss_dssp TTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEE
T ss_pred cccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEe
Confidence 5 577999999999999999999886632 21 66679999999 7789999
Q ss_pred EeCCCcEEEeC
Q 044075 776 ASHDKSVKIWK 786 (786)
Q Consensus 776 gs~DG~I~IWd 786 (786)
|+.||.|+|||
T Consensus 346 ~~~d~~i~~wd 356 (437)
T 3gre_A 346 DEATSSIVMFS 356 (437)
T ss_dssp EGGGTEEEEEE
T ss_pred cCCCCeEEEEE
Confidence 99999999996
No 97
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=9.6e-30 Score=286.17 Aligned_cols=242 Identities=19% Similarity=0.367 Sum_probs=210.1
Q ss_pred eecCCCCCCeEEEEEccC-CCEEEEEeCCCcEEEEcCCCC---------cceeeeecCCCCCeEEEEEecCCCeEEEEEc
Q 044075 545 CTPDDHNHIITDVRFRPN-STQLATSSFDKTVRIWDAAKP---------NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCD 614 (786)
Q Consensus 545 ~~l~~h~~~V~sl~fspd-g~~Lasgs~Dg~I~VWdl~s~---------~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs 614 (786)
.....|.+.|++++|+|+ +.+|++++.||.|+|||+... ......+.+|...|.+++|+|++..+|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 344678999999999997 679999999999999999762 2356778899999999999999886777999
Q ss_pred CCCcEEEEeCCCCe----------eeEeecCCeEEEEEeC-CCCEEEEEECCCeEEEEEcCCC---cEEEEEecCCCCEE
Q 044075 615 GNSEIRFWNLSQYS----------CARISKGGTVQVRFQP-RLGLLLAAASENVVSIFDVETD---RLTHSFKGHSTEIH 680 (786)
Q Consensus 615 ~Dg~I~iwDl~~~~----------~~~~~~~~i~~i~~sp-~g~~Ll~gs~dg~I~iwD~~t~---~~i~~l~~h~~~I~ 680 (786)
.||.|++||+.... ....+...+.+++|+| ++..|++++.|+.|++||+++. +.+..+..|...|+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 99999999998732 1223446789999999 6778899999999999999987 57778888999999
Q ss_pred EEEEcCCCC-EEEEEeCC-eEEEEECCC-CeeEEEEccCCCceEEEEEeCCCC-EEEEEECCCeEEEEECCC--------
Q 044075 681 SVCWDTNGE-YLASVSQD-SVRVWSLAS-GECIHELSSSGNKFHSCIFHPSYP-TLMVIGGYQSLELWNMAE-------- 748 (786)
Q Consensus 681 sv~~spdg~-~Lasgs~D-~I~vwDl~s-~~~i~~l~~~~~~I~sv~fspdg~-~L~sgs~dg~I~IwDl~~-------- 748 (786)
+++|+|++. +|++++.| .|++||+++ ..++..+..|...|.+++|+|++. +|++++.|+.|+|||+..
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 361 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 361 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc
Confidence 999999987 68899998 999999998 567888889999999999999985 689999999999999987
Q ss_pred -------CeEEEEcccCCCeEEEEEcCCCC-EEEEEeCCCcEEEeC
Q 044075 749 -------NKCMTIAAHDCVISALAQSPVTG-MVASASHDKSVKIWK 786 (786)
Q Consensus 749 -------~~~~~~~~h~~~V~slafspdg~-~LaSgs~DG~I~IWd 786 (786)
.......+|...|++++|+|++. +|++++.||.|+||+
T Consensus 362 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 362 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp HHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred ccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 33346668999999999999999 999999999999996
No 98
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=2.9e-30 Score=290.76 Aligned_cols=280 Identities=12% Similarity=0.137 Sum_probs=221.8
Q ss_pred ccccCCC--cceeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcC-CCCEEEEEECCCeE
Q 044075 457 IGSLDDN--VESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSS-DGKLLASAGHDKKV 533 (786)
Q Consensus 457 v~sld~~--~~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSp-dg~~Lasgs~Dg~V 533 (786)
|.+++.+ ...+++....||...++.+... ....+..+.+|.+.|+||+|+| ++.+|++|+.||+|
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~------------~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK------------DKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCC------------SCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCC------------CceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 4445443 3446677777888888865432 1223445678999999999998 78999999999999
Q ss_pred EEEEcCCCeeeeecC--CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEE
Q 044075 534 VVWNMENFQTECTPD--DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFC 611 (786)
Q Consensus 534 ~IWdl~t~~~~~~l~--~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~ 611 (786)
+|||+++........ .+...+.+++|+|++.+|++|+.||.|++||++.. .+..+.+|...|.+++|+|++..+++
T Consensus 190 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~--~~~~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 190 RLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK--ELWNLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp EEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC--BCCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred EEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc--eeEEEecccceEEeeeecCCCceEEE
Confidence 999998765544433 34456889999999999999999999999999754 46778899999999999999999999
Q ss_pred EEcCCCcEEEEeCCCCeeeE------eecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCC------CE
Q 044075 612 SCDGNSEIRFWNLSQYSCAR------ISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHST------EI 679 (786)
Q Consensus 612 sgs~Dg~I~iwDl~~~~~~~------~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~------~I 679 (786)
+++.|+.|++||+++.+... .+...+.+++|+|++.+|++++.|+.|++||++++.....+..|.. .+
T Consensus 268 s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 347 (435)
T 4e54_B 268 TASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTP 347 (435)
T ss_dssp EEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCC
T ss_pred EecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccccccee
Confidence 99999999999998755332 2346789999999999999999999999999999988777766543 23
Q ss_pred EEEEEcCCCCEEEEEe------------CC-eEEEEECCCCeeEEEEc-cCCCceEEE-EEeCCCCEEEEEECCCeEEEE
Q 044075 680 HSVCWDTNGEYLASVS------------QD-SVRVWSLASGECIHELS-SSGNKFHSC-IFHPSYPTLMVIGGYQSLELW 744 (786)
Q Consensus 680 ~sv~~spdg~~Lasgs------------~D-~I~vwDl~s~~~i~~l~-~~~~~I~sv-~fspdg~~L~sgs~dg~I~Iw 744 (786)
..+.|++++.++++++ ++ .|++||..+++++..+. .|...|.++ +|+|++.+|++++ |+.|+||
T Consensus 348 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW 426 (435)
T 4e54_B 348 IKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIW 426 (435)
T ss_dssp CBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEEC
T ss_pred EEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEE
Confidence 4567788777777664 23 69999999999988875 567778877 6999999888764 8899999
Q ss_pred ECCCCeE
Q 044075 745 NMAENKC 751 (786)
Q Consensus 745 Dl~~~~~ 751 (786)
|+.+++.
T Consensus 427 ~~~~gk~ 433 (435)
T 4e54_B 427 SQQEART 433 (435)
T ss_dssp CCC----
T ss_pred ECCcCee
Confidence 9998764
No 99
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.7e-31 Score=305.03 Aligned_cols=253 Identities=12% Similarity=0.055 Sum_probs=199.3
Q ss_pred CCCCEEEEEECCCeEEEEEcCCCeee----eecCCCCCCeEEEEEccC------CCEEEEEeCCCcEEEEcCCCCcc---
Q 044075 519 SDGKLLASAGHDKKVVVWNMENFQTE----CTPDDHNHIITDVRFRPN------STQLATSSFDKTVRIWDAAKPNF--- 585 (786)
Q Consensus 519 pdg~~Lasgs~Dg~V~IWdl~t~~~~----~~l~~h~~~V~sl~fspd------g~~Lasgs~Dg~I~VWdl~s~~~--- 585 (786)
|+++.|++++.|++|+|||+.+++.. ..+..|.+.|.+|+|+|+ +.+||+++.||+|+|||+.++..
T Consensus 171 ~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~ 250 (524)
T 2j04_B 171 EHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVH 250 (524)
T ss_dssp -----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSS
T ss_pred hhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccc
Confidence 33444555668899999999876542 345678889999999996 57999999999999999986531
Q ss_pred -------eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee----eEeecCCeEEE--EEeCCC-CEEEE
Q 044075 586 -------CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC----ARISKGGTVQV--RFQPRL-GLLLA 651 (786)
Q Consensus 586 -------~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~----~~~~~~~i~~i--~~sp~g-~~Ll~ 651 (786)
....+.+|...|++++|++++ .|++|+.||+|++||+++... ...+...|.++ .|++++ ..|++
T Consensus 251 ~~~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 251 VFKMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp EEECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEE
T ss_pred cceeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEE
Confidence 123677899999999999753 577999999999999986532 23345778888 567887 89999
Q ss_pred EECCCeEEEEEcCCCcEEEEEecCCC--CEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCC
Q 044075 652 AASENVVSIFDVETDRLTHSFKGHST--EIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPS 728 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~l~~h~~--~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspd 728 (786)
++.|++|+|||+++++++..+.+|.. .|.+|+|+|++..|++++.| +|++||++++.++..+.+|...|.+++|+|+
T Consensus 329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL 408 (524)
T ss_dssp EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSS
T ss_pred eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCC
Confidence 99999999999998877666666653 58899999999999999988 9999999999988889999999999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEEc-----ccCCCeEEEEEcCCCCEE
Q 044075 729 YPTLMVIGGYQSLELWNMAENKCMTIA-----AHDCVISALAQSPVTGMV 773 (786)
Q Consensus 729 g~~L~sgs~dg~I~IwDl~~~~~~~~~-----~h~~~V~slafspdg~~L 773 (786)
+++|++|+.|++|++||+......... .+...|++++|+|++..+
T Consensus 409 g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 409 HPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp CCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEE
T ss_pred CCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeE
Confidence 999999999999999998764211111 112257899999999855
No 100
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=7.7e-29 Score=272.47 Aligned_cols=312 Identities=15% Similarity=0.297 Sum_probs=219.5
Q ss_pred ceeEeccCCCCceeeeccccCCCcccccccccceeeeeE-----EeecCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEc
Q 044075 465 ESFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVS-----SIRKSSSKVTCCHFSS-DGKLLASAGHDKKVVVWNM 538 (786)
Q Consensus 465 ~~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----~l~~H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl 538 (786)
..++.....++...++.+........ +...... ...+|...|.+++|+| ++.+|++++.||.|++||+
T Consensus 56 ~~~l~~~~~dg~i~iw~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 129 (408)
T 4a11_B 56 GRYMLSGGSDGVIVLYDLENSSRQSY------YTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDT 129 (408)
T ss_dssp CCEEEEEETTSCEEEEECCCCSSSSC------EEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEET
T ss_pred CCEEEEEcCCCeEEEEECCCCcccce------EeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeC
Confidence 34555666677787777664322111 1111111 1236999999999999 7889999999999999999
Q ss_pred CCCeeeeecCCCCCCeEEEEEccC---CCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcC
Q 044075 539 ENFQTECTPDDHNHIITDVRFRPN---STQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDG 615 (786)
Q Consensus 539 ~t~~~~~~l~~h~~~V~sl~fspd---g~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~ 615 (786)
.+++....+. +...+.++.|++. +.+|++++.|+.|++||+.++. ....+..|...|.+++|+|++..++++++.
T Consensus 130 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~ 207 (408)
T 4a11_B 130 NTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS-CSHILQGHRQEILAVSWSPRYDYILATASA 207 (408)
T ss_dssp TTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC-CCEEECCCCSCEEEEEECSSCTTEEEEEET
T ss_pred CCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc-eeeeecCCCCcEEEEEECCCCCcEEEEEcC
Confidence 9999888776 6778999999984 4599999999999999999876 577888999999999999999988889999
Q ss_pred CCcEEEEeCCCCe-ee------------------EeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCC
Q 044075 616 NSEIRFWNLSQYS-CA------------------RISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHS 676 (786)
Q Consensus 616 Dg~I~iwDl~~~~-~~------------------~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~ 676 (786)
||.|++||++... +. ..+...+.+++|+|++.+|++++.|+.|++||+++++....+..+.
T Consensus 208 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 287 (408)
T 4a11_B 208 DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKV 287 (408)
T ss_dssp TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCC
T ss_pred CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccc
Confidence 9999999998654 11 1234678999999999999999999999999999987654443221
Q ss_pred -----CC-EEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe
Q 044075 677 -----TE-IHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK 750 (786)
Q Consensus 677 -----~~-I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~ 750 (786)
.. ...+.......+++++.++.|++||+.+++++..+..|...|.+++|+|++.+|++++.||.|++||+.+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 288 CNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp CCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred cccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 11 222222334445554444499999999999999999999999999999999999999999999999999988
Q ss_pred EEEEcccCCCeEEEEEcC-CCCEEEEEeCCCcEEEeC
Q 044075 751 CMTIAAHDCVISALAQSP-VTGMVASASHDKSVKIWK 786 (786)
Q Consensus 751 ~~~~~~h~~~V~slafsp-dg~~LaSgs~DG~I~IWd 786 (786)
.+......... ..+.+ ....+.+++.|+.|+||+
T Consensus 368 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~W~ 402 (408)
T 4a11_B 368 PVPDDDETTTK--SQLNPAFEDAWSSSDEEGGTSAWS 402 (408)
T ss_dssp -------------------------------------
T ss_pred ccCCCCceEec--cccccccceeecccCccCceeecC
Confidence 76433222222 22233 333556777899999995
No 101
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=4.3e-30 Score=281.49 Aligned_cols=267 Identities=14% Similarity=0.150 Sum_probs=206.9
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe---e
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ---T 543 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~---~ 543 (786)
++.....++...++.+... .++.+..+.+|.+.|++++|+|++++|++++.|+.|+|||+.+++ .
T Consensus 25 ~l~~~~~d~~i~iw~~~~~------------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~ 92 (377)
T 3dwl_C 25 EFVTTTATNQVELYEQDGN------------GWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQ 92 (377)
T ss_dssp EEECCCSSSCBCEEEEETT------------EEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCC
T ss_pred EEEEecCCCEEEEEEccCC------------ceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceee
Confidence 3444445566666654321 235667788999999999999999999999999999999999876 6
Q ss_pred eeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc--eeeeecC-CCCCeEEEEEecCCCeEEEEEcCCCcEE
Q 044075 544 ECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF--CLQTYTG-HNNHVMSLDFHPKKNDLFCSCDGNSEIR 620 (786)
Q Consensus 544 ~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~--~~~~~~~-h~~~V~sl~~sp~g~~ll~sgs~Dg~I~ 620 (786)
...+..|...|++++|+|++++|++++.|+.|++||+++... +...+.. |...|.+++|+|++.. +++++.|+.|+
T Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~~~~~d~~i~ 171 (377)
T 3dwl_C 93 TLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL-LAAGCADRKAY 171 (377)
T ss_dssp EEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE-EEEEESSSCEE
T ss_pred eeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE-EEEEeCCCEEE
Confidence 777889999999999999999999999999999999988653 3556666 9999999999998764 55889999999
Q ss_pred EEeCCC------------------CeeeE--eecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcE----EEEEecCC
Q 044075 621 FWNLSQ------------------YSCAR--ISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRL----THSFKGHS 676 (786)
Q Consensus 621 iwDl~~------------------~~~~~--~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~----i~~l~~h~ 676 (786)
+||+.. ++++. .+...+.+++|+|++.+|++++.|+.|++||+++++. +..+.+|.
T Consensus 172 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 251 (377)
T 3dwl_C 172 VLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQ 251 (377)
T ss_dssp EEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSS
T ss_pred EEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCC
Confidence 999852 22333 2346689999999999999999999999999999877 77888999
Q ss_pred CCEEEEEEcCCCCEEEEEeCCeEEEEECCCCe------------------------------eE------EEE-------
Q 044075 677 TEIHSVCWDTNGEYLASVSQDSVRVWSLASGE------------------------------CI------HEL------- 713 (786)
Q Consensus 677 ~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~------------------------------~i------~~l------- 713 (786)
..|.+++|+|++++|++++.+.+.+|+..... .+ ..+
T Consensus 252 ~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 331 (377)
T 3dwl_C 252 LPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKG 331 (377)
T ss_dssp SCEEEEEEEETTEEEEEESSSSEEEECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC--------------------
T ss_pred CceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhcc
Confidence 99999999999999999988866688765211 00 111
Q ss_pred ---------ccCCCceEEEEEeCCC-C---EEEEEECCCeEEEEEC
Q 044075 714 ---------SSSGNKFHSCIFHPSY-P---TLMVIGGYQSLELWNM 746 (786)
Q Consensus 714 ---------~~~~~~I~sv~fspdg-~---~L~sgs~dg~I~IwDl 746 (786)
..|...|+++.+.+.. . .|++++.||.|+|||+
T Consensus 332 ~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 332 SSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -----CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 1288899999976644 3 6999999999999985
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-30 Score=282.34 Aligned_cols=260 Identities=12% Similarity=0.067 Sum_probs=210.6
Q ss_pred EEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC---------CCcce
Q 044075 516 HFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA---------KPNFC 586 (786)
Q Consensus 516 afSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~---------s~~~~ 586 (786)
.+.+++.+|++|+.||.|+|||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.. +....
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 445678899999999999999999998888776 467888899988 9999999999999766 33322
Q ss_pred eeeecCCCCCeEEEEEec--CCCeEEEEEcCCCcEEEEeCCCCeeeEeec----CCeEEEEEeCCCCEEEEEECCCeEEE
Q 044075 587 LQTYTGHNNHVMSLDFHP--KKNDLFCSCDGNSEIRFWNLSQYSCARISK----GGTVQVRFQPRLGLLLAAASENVVSI 660 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp--~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----~~i~~i~~sp~g~~Ll~gs~dg~I~i 660 (786)
.....+|...|.+++|+| ++.. +++++.||.|++||++++++..... ..+.+++|+|++.+|++|+.|+.|++
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~-l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEY-FIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCE-EEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCE-EEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 233346778999999999 7765 5589999999999999988865442 46889999999999999999999999
Q ss_pred EEcCCCcEE-EEEec-CCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEcc---CCCce--EEEEEeCCCCEEE
Q 044075 661 FDVETDRLT-HSFKG-HSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSS---SGNKF--HSCIFHPSYPTLM 733 (786)
Q Consensus 661 wD~~t~~~i-~~l~~-h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~---~~~~I--~sv~fspdg~~L~ 733 (786)
||+++++.+ ..+.. |...|.+++|+|++.+|++++++.|++||+++++++..+.. +...+ .+++|+|++++|+
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 276 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMI 276 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEE
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEE
Confidence 999999877 78888 99999999999999999999977999999999876654443 33333 3699999999999
Q ss_pred EEEC-CCeEEEEECCCCeEE-EEcccCCCeEEEEEcC---CCCEEEEEeCCCcEEEe
Q 044075 734 VIGG-YQSLELWNMAENKCM-TIAAHDCVISALAQSP---VTGMVASASHDKSVKIW 785 (786)
Q Consensus 734 sgs~-dg~I~IwDl~~~~~~-~~~~h~~~V~slafsp---dg~~LaSgs~DG~I~IW 785 (786)
+++. |+.|+||++...... .. ..+..++|.+ +...|++++.||.+.++
T Consensus 277 ~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 277 AYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp EEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred EecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEE
Confidence 9998 999999998654321 21 5677788888 77888888888888775
No 103
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=3e-28 Score=259.00 Aligned_cols=242 Identities=17% Similarity=0.302 Sum_probs=211.9
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCC
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKP 583 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~ 583 (786)
.+.+|...|+|++|+|++++||+|+.||+|+|||+.+++.+..+.+|...+.++.+. +..|++++.++.+++|+....
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~ 139 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVA 139 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSS
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC--CCEEEEEecCCceEeeecCCC
Confidence 456788999999999999999999999999999999999999999999988876654 679999999999999999988
Q ss_pred cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee-------EeecCCeEEEEEeCCCCEEE---EEE
Q 044075 584 NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA-------RISKGGTVQVRFQPRLGLLL---AAA 653 (786)
Q Consensus 584 ~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~-------~~~~~~i~~i~~sp~g~~Ll---~gs 653 (786)
...+..+.+|...+.++.+.+++..++ +++.|+.|++||+++++.. ....+.+..+.+++.+..++ +++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 218 (318)
T 4ggc_A 140 EHHVATLSGHSQEVCGLRWAPDGRHLA-SGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 218 (318)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEE-EEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECT
T ss_pred ceeEEEEcCccCceEEEEEcCCCCEEE-EEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecC
Confidence 877888999999999999999887555 8999999999999875422 22336788899998776443 445
Q ss_pred CCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEe--CC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCC
Q 044075 654 SENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVS--QD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYP 730 (786)
Q Consensus 654 ~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs--~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~ 730 (786)
.++.|++||.+......... +...+..++|++++..+++++ .| .|+|||+++++++.++.+|...|++++|+|+++
T Consensus 219 ~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~ 297 (318)
T 4ggc_A 219 SDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGA 297 (318)
T ss_dssp TTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred CCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 67999999999987776655 778899999999999888765 56 899999999999999999999999999999999
Q ss_pred EEEEEECCCeEEEEECCCC
Q 044075 731 TLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 731 ~L~sgs~dg~I~IwDl~~~ 749 (786)
+|++++.|++|+|||+.+.
T Consensus 298 ~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 298 TVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CEEEEETTTEEEEECCSCC
T ss_pred EEEEEecCCeEEEEECCCC
Confidence 9999999999999999764
No 104
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=4.7e-29 Score=280.52 Aligned_cols=247 Identities=21% Similarity=0.399 Sum_probs=216.7
Q ss_pred EEeecCCCCeEEEEEcCC-CCEEEEEECCCeEEEEEcCC----------CeeeeecCCCCCCeEEEEEccCCC-EEEEEe
Q 044075 503 SSIRKSSSKVTCCHFSSD-GKLLASAGHDKKVVVWNMEN----------FQTECTPDDHNHIITDVRFRPNST-QLATSS 570 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpd-g~~Lasgs~Dg~V~IWdl~t----------~~~~~~l~~h~~~V~sl~fspdg~-~Lasgs 570 (786)
.....|.+.|++++|+|+ +.+||+++.||.|+||++.+ ......+.+|...|++++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 455679999999999997 78999999999999999986 677788899999999999999988 999999
Q ss_pred CCCcEEEEcCCCCcc------eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC---eeeE---eecCCeE
Q 044075 571 FDKTVRIWDAAKPNF------CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY---SCAR---ISKGGTV 638 (786)
Q Consensus 571 ~Dg~I~VWdl~s~~~------~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~---~~~~---~~~~~i~ 638 (786)
.||.|+|||+..... ....+.+|...|.+++|+|++..+|++++.|+.|++||+++. .... .+...+.
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999987331 134567899999999999987888889999999999999876 2332 3457789
Q ss_pred EEEEeCCCC-EEEEEECCCeEEEEEcCC-CcEEEEEecCCCCEEEEEEcCCCC-EEEEEeCC-eEEEEECCC--------
Q 044075 639 QVRFQPRLG-LLLAAASENVVSIFDVET-DRLTHSFKGHSTEIHSVCWDTNGE-YLASVSQD-SVRVWSLAS-------- 706 (786)
Q Consensus 639 ~i~~sp~g~-~Ll~gs~dg~I~iwD~~t-~~~i~~l~~h~~~I~sv~~spdg~-~Lasgs~D-~I~vwDl~s-------- 706 (786)
+++|+|++. .|++++.|+.|++||+++ ..++..+..|...|.+++|+|++. +|++++.| .|+|||+..
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 361 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 361 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc
Confidence 999999987 688999999999999998 567888889999999999999985 68889888 999999987
Q ss_pred ------CeeEEEEccCCCceEEEEEeCCCC-EEEEEECCCeEEEEECCCC
Q 044075 707 ------GECIHELSSSGNKFHSCIFHPSYP-TLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 707 ------~~~i~~l~~~~~~I~sv~fspdg~-~L~sgs~dg~I~IwDl~~~ 749 (786)
...+..+..|...|.+++|+|+++ +|++++.|+.|+||++...
T Consensus 362 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 362 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred ccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 367788888999999999999999 8999999999999998753
No 105
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=8.5e-28 Score=264.54 Aligned_cols=260 Identities=12% Similarity=0.158 Sum_probs=221.7
Q ss_pred CEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEE-EEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEE
Q 044075 522 KLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQL-ATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSL 600 (786)
Q Consensus 522 ~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~L-asgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl 600 (786)
.++++++.|+.|++||+.+++.+..+..|. .+.+++|+|++++| ++++.|+.|++||+.+++ ....+..+. .+.++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~-~~~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNN-VIATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE-EEEEEECSS-SEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCe-EEEEEECCC-Cccce
Confidence 467888899999999999999999888775 48999999999977 566689999999998876 455555444 89999
Q ss_pred EEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEE-EEEECCCeEEEEEcCCCcEEEEEecCCC
Q 044075 601 DFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLL-LAAASENVVSIFDVETDRLTHSFKGHST 677 (786)
Q Consensus 601 ~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~L-l~gs~dg~I~iwD~~t~~~i~~l~~h~~ 677 (786)
+|+|+++.++++++.++.|++||+.+++.+.... ..+..++|+|+++.+ ++++.++.|++||+++++.+..+..+ .
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~ 158 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-R 158 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-S
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-C
Confidence 9999999998888889999999999988776554 567889999999988 56666899999999999988888754 5
Q ss_pred CEEEEEEcCCCCEE-EEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEE---CCCeEEEEECCCCeEE
Q 044075 678 EIHSVCWDTNGEYL-ASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIG---GYQSLELWNMAENKCM 752 (786)
Q Consensus 678 ~I~sv~~spdg~~L-asgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs---~dg~I~IwDl~~~~~~ 752 (786)
.+.+++|+|++++| ++++.+ .|++||+++++++..+.. ...+.+++|+|++++|++++ .++.|++||+.+++.+
T Consensus 159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec-CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 67999999999988 455666 999999999988877754 56889999999999999988 6899999999999887
Q ss_pred EEcccCCCeEEEEEcCCCCEE-EEEeCCCcEEEeC
Q 044075 753 TIAAHDCVISALAQSPVTGMV-ASASHDKSVKIWK 786 (786)
Q Consensus 753 ~~~~h~~~V~slafspdg~~L-aSgs~DG~I~IWd 786 (786)
........+.+++|+|++++| ++++.|+.|++||
T Consensus 238 ~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d 272 (391)
T 1l0q_A 238 ARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVID 272 (391)
T ss_dssp EEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEE
Confidence 555555578999999999977 6778899999996
No 106
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=8.2e-29 Score=275.05 Aligned_cols=273 Identities=17% Similarity=0.263 Sum_probs=222.7
Q ss_pred eeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEcCCC---
Q 044075 466 SFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSS-DGKLLASAGHDKKVVVWNMENF--- 541 (786)
Q Consensus 466 ~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t~--- 541 (786)
.++.....+|...++.+..... ....+..+.+|.+.|++++|+| ++++|++|+.||.|+|||+.++
T Consensus 48 ~~~~~~~~~g~i~v~~~~~~~~----------~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 48 ALICEASGGGAFLVLPLGKTGR----------VDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV 117 (402)
T ss_dssp EEEBCCSSSCCEEEEETTCCEE----------CCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS
T ss_pred EEEEEEcCCCEEEEEECccCCC----------CCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc
Confidence 3444456677777776543211 1134456788999999999999 9999999999999999999987
Q ss_pred ----eeeeecCCCCCCeEEEEEccCC-CEEEEEeCCCcEEEEcCCCCcceeeee--cCCCCCeEEEEEecCCCeEEEEEc
Q 044075 542 ----QTECTPDDHNHIITDVRFRPNS-TQLATSSFDKTVRIWDAAKPNFCLQTY--TGHNNHVMSLDFHPKKNDLFCSCD 614 (786)
Q Consensus 542 ----~~~~~l~~h~~~V~sl~fspdg-~~Lasgs~Dg~I~VWdl~s~~~~~~~~--~~h~~~V~sl~~sp~g~~ll~sgs 614 (786)
+.+..+.+|...|++++|+|++ .+|++++.|+.|+|||+.+++ .+..+ ..|...|.+++|+|++..++ +++
T Consensus 118 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~ 195 (402)
T 2aq5_A 118 LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA-AVLTLGPDVHPDTIYSVDWSRDGALIC-TSC 195 (402)
T ss_dssp SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE-EEEEECTTTCCSCEEEEEECTTSSCEE-EEE
T ss_pred cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC-ccEEEecCCCCCceEEEEECCCCCEEE-EEe
Confidence 5678889999999999999998 699999999999999999876 46666 78999999999999887655 888
Q ss_pred CCCcEEEEeCCCCeeeEee-c---C-CeEEEEEeCCCCEEEEE---ECCCeEEEEEcCCCcE-EEEEe-cCCCCEEEEEE
Q 044075 615 GNSEIRFWNLSQYSCARIS-K---G-GTVQVRFQPRLGLLLAA---ASENVVSIFDVETDRL-THSFK-GHSTEIHSVCW 684 (786)
Q Consensus 615 ~Dg~I~iwDl~~~~~~~~~-~---~-~i~~i~~sp~g~~Ll~g---s~dg~I~iwD~~t~~~-i~~l~-~h~~~I~sv~~ 684 (786)
.|+.|++||+++++.+..+ . + .+..+.|++++.+|+++ +.|+.|++||+++.+. +.... .|...|.+++|
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF 275 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE
Confidence 8999999999998887665 2 2 26889999999988888 6899999999998753 33322 47788999999
Q ss_pred cCCCCEEEEEe-CC-eEEEEECCCCee-EEEEcc--CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 685 DTNGEYLASVS-QD-SVRVWSLASGEC-IHELSS--SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 685 spdg~~Lasgs-~D-~I~vwDl~s~~~-i~~l~~--~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
+|++.+|++++ .| .|++||+.+++. +..+.. +...|.+++|+|++.++++ .++.+++|++.++.+.
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKCE 346 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcEE
Confidence 99999997554 57 999999998873 444443 4589999999999987764 5679999999987664
No 107
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.4e-28 Score=276.64 Aligned_cols=274 Identities=18% Similarity=0.367 Sum_probs=218.5
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeee
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECT 546 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~ 546 (786)
++.....++...++... +.+.+..+.+|.+.|+|++| ++++|++|+.||.|+|||+.+++.+..
T Consensus 145 ~l~~g~~dg~i~iwd~~--------------~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~ 208 (435)
T 1p22_A 145 KIVSGLRDNTIKIWDKN--------------TLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNT 208 (435)
T ss_dssp EEEEEESSSCEEEEESS--------------SCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEE
T ss_pred EEEEEeCCCeEEEEeCC--------------CCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 34444456666666543 23456778899999999999 788999999999999999999999999
Q ss_pred cCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce--eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeC
Q 044075 547 PDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC--LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNL 624 (786)
Q Consensus 547 l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~--~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl 624 (786)
+..|...|.+++|+ +..|++|+.||.|++||+.++... ...+.+|...|.+++|. +. ++++++.||.|++||+
T Consensus 209 ~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~s~~~dg~i~vwd~ 283 (435)
T 1p22_A 209 LIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DK-YIVSASGDRTIKVWNT 283 (435)
T ss_dssp ECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEET
T ss_pred EcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--CC-EEEEEeCCCeEEEEEC
Confidence 99999999999997 459999999999999999886632 26678899999999993 44 5668999999999999
Q ss_pred CCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEE
Q 044075 625 SQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVR 700 (786)
Q Consensus 625 ~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~ 700 (786)
++++.+..+. ..+.++.+ ++..+++++.|+.|++||+++++.+..+.+|...|.+++| ++.+|++++.| .|+
T Consensus 284 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~ 359 (435)
T 1p22_A 284 STCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIK 359 (435)
T ss_dssp TTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEE
T ss_pred CcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEE
Confidence 9988776655 55677777 4689999999999999999999999999999999999998 78899999999 999
Q ss_pred EEECCCCe---------eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEc
Q 044075 701 VWSLASGE---------CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQS 767 (786)
Q Consensus 701 vwDl~s~~---------~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafs 767 (786)
+||+.++. ++..+..|...|.+++| ++.+|++++.||.|++||+.+...........++.++.|.
T Consensus 360 vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 433 (435)
T 1p22_A 360 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTYTYI 433 (435)
T ss_dssp EEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC----------------------
T ss_pred EEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCCCCCCccceeee
Confidence 99998765 88999999999999999 6778999999999999999987766544445555555554
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.6e-29 Score=286.70 Aligned_cols=255 Identities=9% Similarity=0.070 Sum_probs=210.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
-...|.+++|+|||+++|+++.|++|+ |.... ..+.+|...|.+|+|+|+| .++.+.+|+.+...
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~--- 78 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNG--- 78 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSC---
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCCCce---
Confidence 457899999999999999999999999 75554 4447999999999999998 45655555543222
Q ss_pred eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee--cC-----CeEEEEEeCCCCEEEEEECCCeEEE
Q 044075 588 QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS--KG-----GTVQVRFQPRLGLLLAAASENVVSI 660 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~--~~-----~i~~i~~sp~g~~Ll~gs~dg~I~i 660 (786)
.....|...|.+++|+|+|..++ +++.||.|++||... ++... .. .+.+++|+|+|++|++|+.||+|++
T Consensus 79 ~~~~~~~~~V~~vawSPdG~~LA-s~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 79 LLNSQPVCYPRVCKPSPIDDWMA-VLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQF 155 (588)
T ss_dssp SSTTSCSCCEEEEEECSSSSCEE-EEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred EeecCCCCcEEEEEECCCCCEEE-EEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEE
Confidence 11225678999999999988665 888999999999655 33222 22 3889999999999999999999999
Q ss_pred EEcCCCc-------EEEEE----ecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCee---EEEE-ccCCCceEEEE
Q 044075 661 FDVETDR-------LTHSF----KGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGEC---IHEL-SSSGNKFHSCI 724 (786)
Q Consensus 661 wD~~t~~-------~i~~l----~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~---i~~l-~~~~~~I~sv~ 724 (786)
||+.++. .+..+ .+|...|.+++|+|+| +++++.| +|++||+..+.. ..++ ..|...|.+++
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva 233 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLK 233 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEE
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEE
Confidence 9999885 36676 5677899999999999 7777778 999999988773 4566 47788999999
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCeEEEEc-ccCCCeEEEEE--cCCCCEEEEEeCCCcEEEeC
Q 044075 725 FHPSYPTLMVIGGYQSLELWNMAENKCMTIA-AHDCVISALAQ--SPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 725 fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~-~h~~~V~slaf--spdg~~LaSgs~DG~I~IWd 786 (786)
|+ +..|++++ ++.|++||+.+++..... +|.+.|++++| +|++..|+++++||+ +||.
T Consensus 234 Fs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 234 IV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp EE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred EE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 99 57888886 699999999999885444 89999999999 999999999999999 9984
No 109
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.9e-29 Score=302.92 Aligned_cols=247 Identities=17% Similarity=0.284 Sum_probs=208.1
Q ss_pred eEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcC--CCeeeeecCCCCCCeEEEEEccC--CCEEEEEeCCCcEEE
Q 044075 502 VSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNME--NFQTECTPDDHNHIITDVRFRPN--STQLATSSFDKTVRI 577 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~--t~~~~~~l~~h~~~V~sl~fspd--g~~Lasgs~Dg~I~V 577 (786)
+..+.+|.+.|+|++|+|++++|++|+.||.|+|||+. +++.+..+.+|...|++++|+++ +++|++|+.||.|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 34678999999999999999999999999999999998 56778889999999999999987 999999999999999
Q ss_pred EcCCCCcc-eeeeecCCCCCeEEEEEecC--CCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEEC
Q 044075 578 WDAAKPNF-CLQTYTGHNNHVMSLDFHPK--KNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 578 Wdl~s~~~-~~~~~~~h~~~V~sl~~sp~--g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~ 654 (786)
||+.++.. ....+.+|...|.+++|+|+ +. ++++++.||.|++||++.....
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~------------------------ 136 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTT------------------------ 136 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCC------------------------
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCc------------------------
Confidence 99988652 45667789999999999998 44 4557778888888887754211
Q ss_pred CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcC-------------CCCEEEEEeCC-eEEEEECCCC----eeEEEEccC
Q 044075 655 ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDT-------------NGEYLASVSQD-SVRVWSLASG----ECIHELSSS 716 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~sp-------------dg~~Lasgs~D-~I~vwDl~s~----~~i~~l~~~ 716 (786)
....+.+|...|.+++|+| ++.+|++++.| .|++||++++ .++..+..|
T Consensus 137 -------------~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h 203 (753)
T 3jro_A 137 -------------SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (753)
T ss_dssp -------------CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred -------------ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC
Confidence 1122345788899999988 58999999999 9999999887 567788899
Q ss_pred CCceEEEEEeCC---CCEEEEEECCCeEEEEECCCCe------EEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 717 GNKFHSCIFHPS---YPTLMVIGGYQSLELWNMAENK------CMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 717 ~~~I~sv~fspd---g~~L~sgs~dg~I~IwDl~~~~------~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
...|.+++|+|+ +.+|++++.||.|++||+.++. ......|...|++++|+|++.+|++|+.||.|+|||
T Consensus 204 ~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 204 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCB
T ss_pred CCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEe
Confidence 999999999999 8999999999999999998863 223446889999999999999999999999999996
No 110
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=4.3e-29 Score=279.38 Aligned_cols=236 Identities=16% Similarity=0.268 Sum_probs=197.4
Q ss_pred CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc----------eeeeecCCC------------CCeEEEEEecCC
Q 044075 549 DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF----------CLQTYTGHN------------NHVMSLDFHPKK 606 (786)
Q Consensus 549 ~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~----------~~~~~~~h~------------~~V~sl~~sp~g 606 (786)
.|.+.|++++|+|++++|++|+.||.|+|||+.+... +...+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 4678999999999999999999999999999987652 466788898 889999999997
Q ss_pred C-eEEEEEcCCCcEEEEeCCCCeee-------------------------------------------EeecCCeEEEEE
Q 044075 607 N-DLFCSCDGNSEIRFWNLSQYSCA-------------------------------------------RISKGGTVQVRF 642 (786)
Q Consensus 607 ~-~ll~sgs~Dg~I~iwDl~~~~~~-------------------------------------------~~~~~~i~~i~~ 642 (786)
+ .++++++.|+.|++||+...... ..+...+.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 4 45668899999999999764431 124467889999
Q ss_pred eCCCCEEEEEECCCeEEEEEcCCC-cEEEE-------EecCCCCEEEEEEcCCC-CEEEEEeCC-eEEEEECCCCee---
Q 044075 643 QPRLGLLLAAASENVVSIFDVETD-RLTHS-------FKGHSTEIHSVCWDTNG-EYLASVSQD-SVRVWSLASGEC--- 709 (786)
Q Consensus 643 sp~g~~Ll~gs~dg~I~iwD~~t~-~~i~~-------l~~h~~~I~sv~~spdg-~~Lasgs~D-~I~vwDl~s~~~--- 709 (786)
+|++.+|+++ .|+.|++||+++. ..+.. +.+|...|.+++|+|++ .+|++++.| .|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 8999999999954 44442 45799999999999998 999999999 999999999886
Q ss_pred -EEEEccCCC------------ceEEEEEeCCCCEEEEEECCCeEEEEECCC-CeEE-EEcccCCC--------------
Q 044075 710 -IHELSSSGN------------KFHSCIFHPSYPTLMVIGGYQSLELWNMAE-NKCM-TIAAHDCV-------------- 760 (786)
Q Consensus 710 -i~~l~~~~~------------~I~sv~fspdg~~L~sgs~dg~I~IwDl~~-~~~~-~~~~h~~~-------------- 760 (786)
+..+..|.. .|.+++|+|++.+|++++. +.|+|||+.. ++.+ .+..|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 788888876 8999999999999999999 9999999986 5544 44455432
Q ss_pred -eEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 761 -ISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 761 -V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+..++|+|++.+|++|+.||.|+|||
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd 370 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFD 370 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEE
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEE
Confidence 33499999999999999999999996
No 111
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=2.3e-26 Score=253.04 Aligned_cols=248 Identities=12% Similarity=0.154 Sum_probs=208.3
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEE-EEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe-CCCcEEE
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLL-ASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS-FDKTVRI 577 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~L-asgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~I~V 577 (786)
+.+..+..|. .+.+++|+|++++| ++++.|+.|++||+.+++.+..+..+. .|.+++|+|++++|++++ .|+.|++
T Consensus 23 ~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v 100 (391)
T 1l0q_A 23 KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSV 100 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEE
Confidence 3445566564 59999999999987 666689999999999999988887666 899999999999886555 6799999
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEE-EEEC
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLL-AAAS 654 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll-~gs~ 654 (786)
||+.+++ .+..+.. ...+.+++|+|+++.++++++.++.|++||+.+++...... ..+..++|+|+++.++ +++.
T Consensus 101 ~d~~~~~-~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~ 178 (391)
T 1l0q_A 101 IDTTSNT-VAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFD 178 (391)
T ss_dssp EETTTTE-EEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETT
T ss_pred EECCCCe-EEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCC
Confidence 9999876 3444544 45789999999999898899999999999999988776654 5678899999999885 5566
Q ss_pred CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEe---CC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCC
Q 044075 655 ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVS---QD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYP 730 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs---~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~ 730 (786)
++.|++||+++++.+..+. +...+.+++|+|++++|++++ .+ .|++||+.+++.+..+..+ ..+.+++|+|+++
T Consensus 179 ~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~ 256 (391)
T 1l0q_A 179 SMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGK 256 (391)
T ss_dssp TTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSS
T ss_pred CCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC-CCccEEEEccCCC
Confidence 8999999999998887776 567899999999999998887 45 9999999999998888775 4578999999999
Q ss_pred EEE-EEECCCeEEEEECCCCeEEE
Q 044075 731 TLM-VIGGYQSLELWNMAENKCMT 753 (786)
Q Consensus 731 ~L~-sgs~dg~I~IwDl~~~~~~~ 753 (786)
+|+ +++.|+.|++||+.+++.+.
T Consensus 257 ~l~~s~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 257 KVYVALSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCcEEE
Confidence 885 55678999999999988763
No 112
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=5.3e-28 Score=266.52 Aligned_cols=241 Identities=13% Similarity=0.150 Sum_probs=193.5
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEE-----------CCCeEEEEEcCCCeeee----e-----cCCCCCCeEEEEEccC
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAG-----------HDKKVVVWNMENFQTEC----T-----PDDHNHIITDVRFRPN 562 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs-----------~Dg~V~IWdl~t~~~~~----~-----l~~h~~~V~sl~fspd 562 (786)
..+.+|.+.|.|++++ ++.+++|+ .|+.|++|++.+..... . ...+...+.+++|+||
T Consensus 67 ~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 67 FALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp EECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred EEccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 4577899999998876 45777664 47789999987543211 1 1345567999999999
Q ss_pred CCEEEEEe--CCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe-----ecC
Q 044075 563 STQLATSS--FDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI-----SKG 635 (786)
Q Consensus 563 g~~Lasgs--~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~-----~~~ 635 (786)
|++|++++ .|++|+|||+.+.+. +..+ .|...|.+++|+|++..++ +++ ++.+++|+..++..... ...
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~~-~~~~-~~~~~V~~v~fspdg~~l~-s~s-~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLTE-KFEI-ETRGEVKDLHFSTDGKVVA-YIT-GSSLEVISTVTGSCIARKTDFDKNW 220 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTEE-EEEE-ECSSCCCEEEECTTSSEEE-EEC-SSCEEEEETTTCCEEEEECCCCTTE
T ss_pred CCEEEEEECCCCCEEEEeECCCCcE-EEEe-CCCCceEEEEEccCCceEE-ecc-ceeEEEEEeccCcceeeeecCCCCC
Confidence 99887654 689999999998763 4444 4778899999999988654 666 45566666666554432 124
Q ss_pred CeEEEEEeCCCCEEEEEECCC----eEEEEEcCCCcE----EEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC
Q 044075 636 GTVQVRFQPRLGLLLAAASEN----VVSIFDVETDRL----THSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS 706 (786)
Q Consensus 636 ~i~~i~~sp~g~~Ll~gs~dg----~I~iwD~~t~~~----i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s 706 (786)
.+.+++|+|++..+++++.++ .+++||+..... ...+.+|...|++++|+|+|++|++|+.| +|+|||+++
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence 578899999999999999887 688899877643 45677899999999999999999999999 999999999
Q ss_pred CeeEEEE-ccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC
Q 044075 707 GECIHEL-SSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 707 ~~~i~~l-~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~ 749 (786)
++++.++ .+|...|++++|+|++++|++++.|++|+|||+..+
T Consensus 301 ~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 301 LSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999886 689999999999999999999999999999999653
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=2e-27 Score=255.74 Aligned_cols=259 Identities=12% Similarity=0.137 Sum_probs=217.1
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEc-CCCeee
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGK-LLASAGHDKKVVVWNM-ENFQTE 544 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~-~Lasgs~Dg~V~IWdl-~t~~~~ 544 (786)
++.....++...++.+... .....+..+.+|...|++++|+|+++ +|++|+.||.|++||+ .+++.
T Consensus 25 ~l~~~~~d~~v~iw~~~~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~- 92 (342)
T 1yfq_A 25 LLLITSWDGSLTVYKFDIQ-----------AKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF- 92 (342)
T ss_dssp EEEEEETTSEEEEEEEETT-----------TTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-
T ss_pred EEEEEcCCCeEEEEEeCCC-----------CccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-
Confidence 3444455666666665432 11123455668999999999999999 9999999999999999 77655
Q ss_pred eecCC--CCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC---------CcceeeeecCCCCCeEEEEEecCCCeEEEEE
Q 044075 545 CTPDD--HNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK---------PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSC 613 (786)
Q Consensus 545 ~~l~~--h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s---------~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sg 613 (786)
..+.. |...|++++|+| +.+|++++.|+.|++||+.+ .+ ++..+. |...|.+++|+|++ ++++
T Consensus 93 ~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~-~~~~v~~~~~~~~~---l~~~ 166 (342)
T 1yfq_A 93 QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL-NSNNTK-VKNKIFTMDTNSSR---LIVG 166 (342)
T ss_dssp EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEES-CSSSSS-SCCCEEEEEECSSE---EEEE
T ss_pred EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCC-eeeEEe-eCCceEEEEecCCc---EEEE
Confidence 67778 999999999999 99999999999999999986 44 344444 88999999999876 6688
Q ss_pred cCCCcEEEEeCCC-Ceee-----EeecCCeEEEEEeC-CCCEEEEEECCCeEEEEEcCCC------cEEEEEecCCC---
Q 044075 614 DGNSEIRFWNLSQ-YSCA-----RISKGGTVQVRFQP-RLGLLLAAASENVVSIFDVETD------RLTHSFKGHST--- 677 (786)
Q Consensus 614 s~Dg~I~iwDl~~-~~~~-----~~~~~~i~~i~~sp-~g~~Ll~gs~dg~I~iwD~~t~------~~i~~l~~h~~--- 677 (786)
+.|+.|++||++. .... ..+...+.+++|+| ++..+++++.|+.|++||++.. +....+..|..
T Consensus 167 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T 1yfq_A 167 MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK 246 (342)
T ss_dssp ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTT
T ss_pred eCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccc
Confidence 8999999999987 4321 12346789999999 9999999999999999999887 77888888865
Q ss_pred ------CEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC-CCceEEEEEeCCCCEEEEEECCCe-EEEEE
Q 044075 678 ------EIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS-GNKFHSCIFHPSYPTLMVIGGYQS-LELWN 745 (786)
Q Consensus 678 ------~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~-~~~I~sv~fspdg~~L~sgs~dg~-I~IwD 745 (786)
.|.+++|+|++++|++++.| .|++||+.+++++..+..| ...|.+++ |++.+|++++.||. .+.|.
T Consensus 247 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 247 DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp CCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred ccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 99999999999999999999 9999999999999999998 99999999 99999999999998 44444
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.7e-28 Score=272.90 Aligned_cols=263 Identities=15% Similarity=0.133 Sum_probs=176.7
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeee-----eecCCCCCCeEEEEEcc--------CCCEEEEEeC
Q 044075 505 IRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTE-----CTPDDHNHIITDVRFRP--------NSTQLATSSF 571 (786)
Q Consensus 505 l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~-----~~l~~h~~~V~sl~fsp--------dg~~Lasgs~ 571 (786)
...|...+....+++++.+||+|+.|++|+|||+.++... ..+.+|.+.|++|+|+| |+++|++|+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 85 ENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp CC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred ccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC
Confidence 3456666666777778889999999999999999887543 35689999999999998 7889999999
Q ss_pred CCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEE
Q 044075 572 DKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLA 651 (786)
Q Consensus 572 Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~ 651 (786)
|++|+|||+.++. ....+..|...|.+++|+|++..++++++.|++|++||++++........... ......+
T Consensus 165 D~tv~~Wd~~~~~-~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~-----~~~~~~~- 237 (393)
T 4gq1_A 165 DCTLIIWRLTDEG-PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTEL-----VKNPWLL- 237 (393)
T ss_dssp TSEEEEEEEETTE-EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC---------------CSCCCSE-
T ss_pred CCeEEEEECCCCc-eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCC-----cccceEE-
Confidence 9999999998766 45666778899999999999988888999999999999998765433221100 0000001
Q ss_pred EECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEc-CCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEE-----
Q 044075 652 AASENVVSIFDVETDRLTHSFKGHSTEIHSVCWD-TNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCI----- 724 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~s-pdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~----- 724 (786)
-++...........+|...|.++.|+ ++++.|++++.| ++++||+..++....+..+...+..+.
T Consensus 238 --------s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~ 309 (393)
T 4gq1_A 238 --------TLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNV 309 (393)
T ss_dssp --------EEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSE
T ss_pred --------ecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccc
Confidence 11111111222334688899999987 799999999999 999999998876666655544443332
Q ss_pred -------------EeC-CC-CEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcE
Q 044075 725 -------------FHP-SY-PTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSV 782 (786)
Q Consensus 725 -------------fsp-dg-~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I 782 (786)
|+| .+ .++++++.|+.|+|||+.++... ....|...|.+|+|+|||++||++++||.+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~ 383 (393)
T 4gq1_A 310 QGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVL 383 (393)
T ss_dssp EEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEE
T ss_pred ccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 333 23 35566677999999999987654 566899999999999999999999988753
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=1.1e-26 Score=251.32 Aligned_cols=269 Identities=16% Similarity=0.227 Sum_probs=216.9
Q ss_pred eeEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee
Q 044075 466 SFLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC 545 (786)
Q Consensus 466 ~~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~ 545 (786)
.++.....++...++.+... .......+.+|.+.|++++|+|++++|++++.||.|+|||+.+++.+.
T Consensus 55 ~~l~~~~~dg~i~iw~~~~~------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 122 (368)
T 3mmy_A 55 NFLIAGSWANDVRCWEVQDS------------GQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ 122 (368)
T ss_dssp EEEEEEETTSEEEEEEECTT------------SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred eEEEEECCCCcEEEEEcCCC------------CceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee
Confidence 45666666777777765431 112336778899999999999999999999999999999999988776
Q ss_pred ecCCCCCCeEEEEE--ccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEe
Q 044075 546 TPDDHNHIITDVRF--RPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWN 623 (786)
Q Consensus 546 ~l~~h~~~V~sl~f--spdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwD 623 (786)
+..|...|++++| ++++.+|++++.|+.|++||+++++ .+..+..+ ..+.++.+.+ . .+++++.++.+++|+
T Consensus 123 -~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~-~~~~~~~~~~--~-~~~~~~~~~~i~~~~ 196 (368)
T 3mmy_A 123 -IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN-PMMVLQLP-ERCYCADVIY--P-MAVVATAERGLIVYQ 196 (368)
T ss_dssp -EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS-CSEEEECS-SCEEEEEEET--T-EEEEEEGGGCEEEEE
T ss_pred -eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc-EEEEEecC-CCceEEEecC--C-eeEEEeCCCcEEEEE
Confidence 5579999999999 8899999999999999999999876 45566655 4677777774 3 445777799999999
Q ss_pred CCCCeeeEee-----cCCeEEEEEeCCCCE----EEEEECCCeEEEEEcCCC---cEEEEEecCCC------------CE
Q 044075 624 LSQYSCARIS-----KGGTVQVRFQPRLGL----LLAAASENVVSIFDVETD---RLTHSFKGHST------------EI 679 (786)
Q Consensus 624 l~~~~~~~~~-----~~~i~~i~~sp~g~~----Ll~gs~dg~I~iwD~~t~---~~i~~l~~h~~------------~I 679 (786)
++........ .....++.+.++... +++++.|+.|++||++.. ..+..+..|.. .|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 276 (368)
T 3mmy_A 197 LENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAV 276 (368)
T ss_dssp CSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCE
T ss_pred eccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccce
Confidence 9875433221 244566666655544 999999999999999987 56777777766 79
Q ss_pred EEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeE---EEEECCCCeEE
Q 044075 680 HSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSL---ELWNMAENKCM 752 (786)
Q Consensus 680 ~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I---~IwDl~~~~~~ 752 (786)
.+++|+|++++|++++.| .|++||+.+++++..+..|...|.+++|+|++.+|++++.|+.. .+|+......+
T Consensus 277 ~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~~~~~~i 353 (368)
T 3mmy_A 277 NGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYI 353 (368)
T ss_dssp EEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCCTTSCCEE
T ss_pred EEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccccCCCcccee
Confidence 999999999999999999 99999999999999999999999999999999999999998744 44555544444
No 116
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=2.8e-26 Score=244.78 Aligned_cols=275 Identities=17% Similarity=0.217 Sum_probs=201.2
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcC--CCCEEEEEECCCeEEEEEcCCC---
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSS--DGKLLASAGHDKKVVVWNMENF--- 541 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSp--dg~~Lasgs~Dg~V~IWdl~t~--- 541 (786)
++.....++...++.+... ...++.+..+.+|...|++++|+| ++++|++|+.||.|+|||+.++
T Consensus 25 ~l~~~~~dg~i~iw~~~~~----------~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~ 94 (351)
T 3f3f_A 25 HVATCSSDQHIKVFKLDKD----------TSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEE 94 (351)
T ss_dssp EEEEEETTSEEEEEEECSS----------SCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCT
T ss_pred EEEEeeCCCeEEEEECCCC----------CCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccc
Confidence 4555566777777765532 123456778889999999999999 6999999999999999999876
Q ss_pred ------eeeeecCCCCCCeEEEEEccC--CCEEEEEeCCCcEEEEcCCCCcceee------------eecCCCCCeEEEE
Q 044075 542 ------QTECTPDDHNHIITDVRFRPN--STQLATSSFDKTVRIWDAAKPNFCLQ------------TYTGHNNHVMSLD 601 (786)
Q Consensus 542 ------~~~~~l~~h~~~V~sl~fspd--g~~Lasgs~Dg~I~VWdl~s~~~~~~------------~~~~h~~~V~sl~ 601 (786)
+.+..+..|...|++++|+|+ +.+|++++.||.|++||+.+.+.... ....|...+.+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (351)
T 3f3f_A 95 CSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLS 174 (351)
T ss_dssp TSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEE
T ss_pred ccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEE
Confidence 567888899999999999999 99999999999999999987653211 1126788999999
Q ss_pred EecC--CCeEEEEEcCCCcEEEEeCCCCee--eEe---ecCCeEEEEEeCCC----CEEEEEECCCeEEEEEcCCCcEEE
Q 044075 602 FHPK--KNDLFCSCDGNSEIRFWNLSQYSC--ARI---SKGGTVQVRFQPRL----GLLLAAASENVVSIFDVETDRLTH 670 (786)
Q Consensus 602 ~sp~--g~~ll~sgs~Dg~I~iwDl~~~~~--~~~---~~~~i~~i~~sp~g----~~Ll~gs~dg~I~iwD~~t~~~i~ 670 (786)
|+|+ ...++++++.++.+.+|+...... ... +...+.+++|+|++ .+|++++.|+.|++||++.+....
T Consensus 175 ~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 254 (351)
T 3f3f_A 175 WCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPL 254 (351)
T ss_dssp ECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---
T ss_pred eccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCcc
Confidence 9997 345666888899998888877654 222 34678999999998 799999999999999999875555
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEEeCC-----eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEE
Q 044075 671 SFKGHSTEIHSVCWDTNGEYLASVSQD-----SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWN 745 (786)
Q Consensus 671 ~l~~h~~~I~sv~~spdg~~Lasgs~D-----~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwD 745 (786)
....+...+....+.+....+..+..+ .+.+|+....+.+..+..|...|.+++|+|++++|++++.||.|+|||
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 334 (351)
T 3f3f_A 255 ASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWK 334 (351)
T ss_dssp ------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred ccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 444444444445555554444444322 466777777788999999999999999999999999999999999999
Q ss_pred CCCCeE
Q 044075 746 MAENKC 751 (786)
Q Consensus 746 l~~~~~ 751 (786)
+.+++.
T Consensus 335 ~~~~~~ 340 (351)
T 3f3f_A 335 ATYSNE 340 (351)
T ss_dssp ECTTSC
T ss_pred cCcCcc
Confidence 987653
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1.7e-25 Score=240.98 Aligned_cols=284 Identities=12% Similarity=0.164 Sum_probs=196.9
Q ss_pred cceeeeeEEeecCCCC----eEEEEEcCCCC---EEEEEECCCeEEEEEcCCC---eeeeecCCCCCCeEEEEEccCCCE
Q 044075 496 AFSFNEVSSIRKSSSK----VTCCHFSSDGK---LLASAGHDKKVVVWNMENF---QTECTPDDHNHIITDVRFRPNSTQ 565 (786)
Q Consensus 496 ~~~~~~v~~l~~H~~~----V~~lafSpdg~---~Lasgs~Dg~V~IWdl~t~---~~~~~l~~h~~~V~sl~fspdg~~ 565 (786)
.-.+..+..++...+. |.++.|-..|. .+++++ ...|++|+..+. +.++++..|+.+|..|.|.||..-
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 100 (356)
T 2w18_A 22 PGNLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYN 100 (356)
T ss_dssp --CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCS
T ss_pred cceeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccc
Confidence 3455667777765443 45555654333 466665 678999999988 899999999999999999986543
Q ss_pred EEEEeC-C---CcEEEEcCCCC--c-ceeeeecCCCCCeEEEEEecCCCeEEEEEc--CCCcEEEEeCCC-CeeeE---e
Q 044075 566 LATSSF-D---KTVRIWDAAKP--N-FCLQTYTGHNNHVMSLDFHPKKNDLFCSCD--GNSEIRFWNLSQ-YSCAR---I 632 (786)
Q Consensus 566 Lasgs~-D---g~I~VWdl~s~--~-~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs--~Dg~I~iwDl~~-~~~~~---~ 632 (786)
|++..- . +.|+..-+... . .......+|...|.++ + +..++.+++ .|+.|++|++.. ++.+. .
T Consensus 101 ~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~-~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~ 176 (356)
T 2w18_A 101 LVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---T-KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFL 176 (356)
T ss_dssp CEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---T-TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEE
T ss_pred eeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---C-CCcEEEecccCCCCcEEEEEECCCCceeeeecc
Confidence 332211 1 11222211111 0 0111223344445443 3 455665543 589999999944 55443 3
Q ss_pred ecCCeEEEEEeC---CCCEEEEEECCCeEEEEEcCCCcEEEEEecCC---CCEEEEEEcCCCCEE------------EEE
Q 044075 633 SKGGTVQVRFQP---RLGLLLAAASENVVSIFDVETDRLTHSFKGHS---TEIHSVCWDTNGEYL------------ASV 694 (786)
Q Consensus 633 ~~~~i~~i~~sp---~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~---~~I~sv~~spdg~~L------------asg 694 (786)
+...+..++|++ ++..|++++.|++|+|||++++++++++.+|. ..+.+++|+|+|.++ ++|
T Consensus 177 ~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSG 256 (356)
T 2w18_A 177 MPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLR 256 (356)
T ss_dssp CCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-----------
T ss_pred CCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeecc
Confidence 446777888888 77999999999999999999999999998754 367788999999887 557
Q ss_pred eCC-eEEEEECCCCeeEEEE-----ccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeE-EEEE
Q 044075 695 SQD-SVRVWSLASGECIHEL-----SSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVIS-ALAQ 766 (786)
Q Consensus 695 s~D-~I~vwDl~s~~~i~~l-----~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~-slaf 766 (786)
+.| +|++||..+++++..+ .+|...+.+..++ +..+++++.|++|+|||+.+++++ ++.+|...+. +++|
T Consensus 257 s~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vaf 334 (356)
T 2w18_A 257 SPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKW 334 (356)
T ss_dssp -CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEE
T ss_pred CCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEE
Confidence 788 9999999999988765 3555555544444 778999999999999999999987 5567877655 6899
Q ss_pred cCCCCEEEEEeCCCcEEEeC
Q 044075 767 SPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 767 spdg~~LaSgs~DG~I~IWd 786 (786)
+|||++|++|+.|++|||||
T Consensus 335 SPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 335 SGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp CSSSSEEEEECTTSCEEEEE
T ss_pred CCCCCEEEEEECCCcEEEec
Confidence 99999999999999999996
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=9.4e-28 Score=273.81 Aligned_cols=243 Identities=12% Similarity=0.109 Sum_probs=202.7
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCC-----CeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNH-----IITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~-----~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
.|.+.|.+|+|||||++||+++.||.|+|||.+. .+..+. |.. .|.+++|+|||++|++|+.||+|+|||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 4678999999999999999999999999999654 666666 665 49999999999999999999999999998
Q ss_pred CCcc------eeeee----cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee---E----eecCCeEEEEEeC
Q 044075 582 KPNF------CLQTY----TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA---R----ISKGGTVQVRFQP 644 (786)
Q Consensus 582 s~~~------~~~~~----~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~---~----~~~~~i~~i~~sp 644 (786)
++.. .+..+ .+|...|.+++|+|++ +++++.|+.|++||+...... . .+...+.+++|+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs- 235 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV- 235 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-
Confidence 8652 24554 6788899999999998 457778999999999887632 1 234668999999
Q ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEE--cCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceE
Q 044075 645 RLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCW--DTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFH 721 (786)
Q Consensus 645 ~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~--spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~ 721 (786)
+..+++++ ++.|++||+.+++......+|...|.++.| +|++..|++++++ + ++|...
T Consensus 236 -g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d---------------- 296 (588)
T 2j04_A 236 -DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED---------------- 296 (588)
T ss_dssp -TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS----------------
T ss_pred -CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec----------------
Confidence 57888886 699999999988774444479999999999 9999999999988 7 999977
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeC
Q 044075 722 SCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASH 778 (786)
Q Consensus 722 sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~ 778 (786)
.+.++|++..+++. |+.+++|+...+... ...+...|++++|+|||.++|+++.
T Consensus 297 ~~~~spd~~l~a~~--d~~v~lW~~~g~~l~-~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 297 ELHVTADNIIAPYL--EKKFKKWSTIWNEFN-NYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp SEEEECCCSSHHHH--HHHHHHTTTTTTSSS-SSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred cEEECCCceEEEEc--CCEEEEEECCCCcee-eeccceEEEEEEECCCCCEEEEEEe
Confidence 25699999876664 899999998766533 3344667999999999999999874
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=2.9e-26 Score=251.41 Aligned_cols=240 Identities=9% Similarity=0.093 Sum_probs=183.0
Q ss_pred EEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEc
Q 044075 535 VWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCD 614 (786)
Q Consensus 535 IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs 614 (786)
||++.+...+..+..|...|++++|+||+++|++|+.|+ ++|||+..... .... +...+..+++.++++.++++++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~ 78 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAH-IMSQ--EMRHLSKVRMLHRTNYVAFVTG 78 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEE-EEEE--ECSCCCEEEECTTSSEEEEECS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcce-eeee--ecCCeEEEEEcCCCCEEEEEEC
Confidence 567777777777889999999999999999999988775 78999887543 2222 2235888899998888888888
Q ss_pred CCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC-cEEEEEecCCCCEEEEEEcCCCCEE
Q 044075 615 GNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASENVVSIFDVETD-RLTHSFKGHSTEIHSVCWDTNGEYL 691 (786)
Q Consensus 615 ~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~-~~i~~l~~h~~~I~sv~~spdg~~L 691 (786)
.|+.|++||+.+++++..+. ..+.+++++++ .+++ +.++.|++||+.+. +.+..+.. ....+++++ .++
T Consensus 79 ~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~--~~~~-~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~l 150 (355)
T 3vu4_A 79 VKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSRE--FIVV-SYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLL 150 (355)
T ss_dssp STTEEEEEETTTTEEEEEEECSSCEEEEEECSS--EEEE-EETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEE
T ss_pred CccEEEEEECCCCcEEEEEECCCceEEEEEcCC--EEEE-EEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEE
Confidence 89999999999988776544 67788888876 3444 35789999999988 66655553 445566777 666
Q ss_pred EEE--eCC-eEEEEECCCCe----------------eEEEEccCCCceEEEEEeCCCCEEEEEECCCe-EEEEECCCCeE
Q 044075 692 ASV--SQD-SVRVWSLASGE----------------CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQS-LELWNMAENKC 751 (786)
Q Consensus 692 asg--s~D-~I~vwDl~s~~----------------~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~-I~IwDl~~~~~ 751 (786)
+++ +.+ .|++||+.++. ++..+..|...|.+++|+|++.+|++++.|++ |+|||+.++++
T Consensus 151 a~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~ 230 (355)
T 3vu4_A 151 VYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL 230 (355)
T ss_dssp EEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE
T ss_pred EEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 664 566 99999999865 26788999999999999999999999999998 99999999887
Q ss_pred EE-Ec-c-cCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 752 MT-IA-A-HDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 752 ~~-~~-~-h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+. +. + |...|++++|+|++++|++++.|++|+|||
T Consensus 231 ~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 231 VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence 74 44 3 999999999999999999999999999996
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-25 Score=254.29 Aligned_cols=241 Identities=12% Similarity=0.085 Sum_probs=201.0
Q ss_pred EeecCCCCeEEEEEcCCCCEE-EEEECCCeEEEEEcC--CCeeeeecC--CCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 504 SIRKSSSKVTCCHFSSDGKLL-ASAGHDKKVVVWNME--NFQTECTPD--DHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~L-asgs~Dg~V~IWdl~--t~~~~~~l~--~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
...+|.+.|++++|+|++++| ++|+.||.|+|||+. +++.+..+. .|...|++++|+|++++|++++.||.|++|
T Consensus 97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSI 176 (450)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEE
Confidence 445788899999999999996 889999999999999 888888775 677899999999999999999999999999
Q ss_pred cCCCCcc---eeeeecCCCCCeEEEEEecC--CCeEEEEEcCCCcEEEEeCCCCeeeEe----ecCCeEEEEEeCCCCEE
Q 044075 579 DAAKPNF---CLQTYTGHNNHVMSLDFHPK--KNDLFCSCDGNSEIRFWNLSQYSCARI----SKGGTVQVRFQPRLGLL 649 (786)
Q Consensus 579 dl~s~~~---~~~~~~~h~~~V~sl~~sp~--g~~ll~sgs~Dg~I~iwDl~~~~~~~~----~~~~i~~i~~sp~g~~L 649 (786)
++.+... ....+.+|...|.+++|+|+ +..+|++++.|+.|++||+.+++++.. +...+.+++|+ ++.+|
T Consensus 177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLL 255 (450)
T ss_dssp ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEE
T ss_pred ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEE
Confidence 9987653 22367789999999999998 244566999999999999998776654 34678999999 99999
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEec-------------------------CCCCEEEEEEcCCCCEEEEEe-CC-eEEEE
Q 044075 650 LAAASENVVSIFDVETDRLTHSFKG-------------------------HSTEIHSVCWDTNGEYLASVS-QD-SVRVW 702 (786)
Q Consensus 650 l~gs~dg~I~iwD~~t~~~i~~l~~-------------------------h~~~I~sv~~spdg~~Lasgs-~D-~I~vw 702 (786)
++++.|+.|++||+++++++..+.. +...|.+++|+|++++|++++ .+ .|+||
T Consensus 256 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 256 LSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp EEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 9999999999999999998888763 245799999999999999998 66 99999
Q ss_pred EC--CCC---eeEEEEccCCCceEEEEEeCCCCEEEEEEC-------CCeEEEEECC
Q 044075 703 SL--ASG---ECIHELSSSGNKFHSCIFHPSYPTLMVIGG-------YQSLELWNMA 747 (786)
Q Consensus 703 Dl--~s~---~~i~~l~~~~~~I~sv~fspdg~~L~sgs~-------dg~I~IwDl~ 747 (786)
|+ ..+ +.+..+..+ ..|.+++|+|++ .+++.+. +..|.+|.+.
T Consensus 336 ~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 336 EMSEKQKGDLALKQIITFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EECSSSTTCEEEEEEEECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EeccCCCCceeeccEeccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEE
Confidence 99 555 677778777 889999999954 4444433 3457888654
No 121
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=9.4e-26 Score=245.22 Aligned_cols=230 Identities=16% Similarity=0.255 Sum_probs=190.3
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCC--CCEEEEEECCCeEEEEEcCCCe--
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSD--GKLLASAGHDKKVVVWNMENFQ-- 542 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpd--g~~Lasgs~Dg~V~IWdl~t~~-- 542 (786)
++.....++...++.+.. .....+..+.+|.+.|++++|+++ +++|++|+.||.|+|||+.+++
T Consensus 25 ~l~~~~~dg~i~iw~~~~------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 92 (379)
T 3jrp_A 25 RLATCSSDKTIKIFEVEG------------ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS 92 (379)
T ss_dssp EEEEEETTSCEEEEEEET------------TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEE
T ss_pred EEEEEECCCcEEEEecCC------------CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCcee
Confidence 444555567777766541 134667788999999999999987 9999999999999999999987
Q ss_pred eeeecCCCCCCeEEEEEccC--CCEEEEEeCCCcEEEEcCCCCcc-eeeeecCCCCCeEEEEEecC------------CC
Q 044075 543 TECTPDDHNHIITDVRFRPN--STQLATSSFDKTVRIWDAAKPNF-CLQTYTGHNNHVMSLDFHPK------------KN 607 (786)
Q Consensus 543 ~~~~l~~h~~~V~sl~fspd--g~~Lasgs~Dg~I~VWdl~s~~~-~~~~~~~h~~~V~sl~~sp~------------g~ 607 (786)
.+..+..|...|++++|+|+ +.+|++++.|+.|++||+.+... ....+..|...|.+++|+|. ..
T Consensus 93 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T 3jrp_A 93 QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 172 (379)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTT
T ss_pred EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCC
Confidence 77888899999999999999 99999999999999999988642 34467789999999999995 34
Q ss_pred eEEEEEcCCCcEEEEeCCCCe----eeEe---ecCCeEEEEEeCC---CCEEEEEECCCeEEEEEcCCCc---EEEEE--
Q 044075 608 DLFCSCDGNSEIRFWNLSQYS----CARI---SKGGTVQVRFQPR---LGLLLAAASENVVSIFDVETDR---LTHSF-- 672 (786)
Q Consensus 608 ~ll~sgs~Dg~I~iwDl~~~~----~~~~---~~~~i~~i~~sp~---g~~Ll~gs~dg~I~iwD~~t~~---~i~~l-- 672 (786)
.++++++.|+.|++||++... .... +...+.+++|+|+ +.+|++++.|+.|++||++++. ....+
T Consensus 173 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 252 (379)
T 3jrp_A 173 RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKE 252 (379)
T ss_dssp CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSS
T ss_pred CEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeecc
Confidence 466689999999999997653 2222 3467899999999 8999999999999999999864 22222
Q ss_pred ecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe
Q 044075 673 KGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE 708 (786)
Q Consensus 673 ~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~ 708 (786)
..|...|.+++|+|++.+|++++.| .|++||+....
T Consensus 253 ~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 253 EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp SCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred ccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 3388899999999999999999999 99999998543
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.8e-27 Score=253.83 Aligned_cols=221 Identities=12% Similarity=0.064 Sum_probs=182.0
Q ss_pred EEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC---------CCe
Q 044075 558 RFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS---------QYS 628 (786)
Q Consensus 558 ~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~---------~~~ 628 (786)
.+.+++.+|++|+.||+|++||+.+++. +..+. ...|.++.|+|. +++++.|++|++|+.. +.+
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~-~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKT-ITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSC-EEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcE-EEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 3445788999999999999999998774 44443 456888888887 6699999999999765 444
Q ss_pred eeEeec----CCeEEEEEeC--CCCEEEEEECCCeEEEEEcCCCcEEEEEec-CCCCEEEEEEcCCCCEEEEEeCC-eEE
Q 044075 629 CARISK----GGTVQVRFQP--RLGLLLAAASENVVSIFDVETDRLTHSFKG-HSTEIHSVCWDTNGEYLASVSQD-SVR 700 (786)
Q Consensus 629 ~~~~~~----~~i~~i~~sp--~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~-h~~~I~sv~~spdg~~Lasgs~D-~I~ 700 (786)
.+..+. ..+.+++|+| ++.++++++.|+.|++||+++++.+..+.. |...|.+++|+|++.+|++|+.| .|+
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 444444 6789999999 999999999999999999999988776644 56689999999999999999999 999
Q ss_pred EEECCCCeeE-EEEcc-CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEE-Ec---ccCCCeE--EEEEcCCCCE
Q 044075 701 VWSLASGECI-HELSS-SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMT-IA---AHDCVIS--ALAQSPVTGM 772 (786)
Q Consensus 701 vwDl~s~~~i-~~l~~-~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~-~~---~h~~~V~--slafspdg~~ 772 (786)
|||+++++.+ ..+.. |...|.+++|+|++.+|++++ ++.|++||+++.+... +. .|...+. +++|+|++++
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN 274 (343)
T ss_dssp EEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE
T ss_pred EEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCE
Confidence 9999999887 78888 999999999999999999999 5599999999876542 11 2334444 6999999999
Q ss_pred EEEEeC-CCcEEEeC
Q 044075 773 VASASH-DKSVKIWK 786 (786)
Q Consensus 773 LaSgs~-DG~I~IWd 786 (786)
|++++. |+.|+||+
T Consensus 275 l~~~s~~d~~i~v~~ 289 (343)
T 3lrv_A 275 MIAYSNESNSLTIYK 289 (343)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEecCCCCcEEEEE
Confidence 999998 99999994
No 123
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=1.4e-24 Score=252.21 Aligned_cols=283 Identities=13% Similarity=0.109 Sum_probs=229.6
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEc--CCCeeeeecCCCCCCeEEEEEcc----CCCEEEEEeC-C
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNM--ENFQTECTPDDHNHIITDVRFRP----NSTQLATSSF-D 572 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl--~t~~~~~~l~~h~~~V~sl~fsp----dg~~Lasgs~-D 572 (786)
+.+.++..+.. +.+++|+|||++|++++.|+.|++||+ .+++.+.++.. ...+..++|+| ++++|++++. +
T Consensus 170 ~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~ 247 (543)
T 1nir_A 170 KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWP 247 (543)
T ss_dssp CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEES
T ss_pred eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccC
Confidence 34455653333 899999999999999999999999999 88888888874 45689999999 9999999885 8
Q ss_pred CcEEEEcCCCCcceeeeecC----------C-CCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE--ee--cCCe
Q 044075 573 KTVRIWDAAKPNFCLQTYTG----------H-NNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR--IS--KGGT 637 (786)
Q Consensus 573 g~I~VWdl~s~~~~~~~~~~----------h-~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~--~~--~~~i 637 (786)
++|.|||..+.+ ++..+.. | ...+.++.++|++..++++...++.|.+||+.+.+.+. .. ...+
T Consensus 248 ~~v~v~D~~t~~-~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~ 326 (543)
T 1nir_A 248 PQFAIMDGETLE-PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFL 326 (543)
T ss_dssp SEEEEEETTTCC-EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSC
T ss_pred CeEEEEeccccc-cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCc
Confidence 999999998876 3444432 2 23789999999999999999999999999998765433 21 2456
Q ss_pred EEEEEeCCCCEEEEEEC-CCeEEEEEcCCCcEEEEEec----CCCCEEEEEEcCC-CCEEEEEe-CC-eEEEEECCC---
Q 044075 638 VQVRFQPRLGLLLAAAS-ENVVSIFDVETDRLTHSFKG----HSTEIHSVCWDTN-GEYLASVS-QD-SVRVWSLAS--- 706 (786)
Q Consensus 638 ~~i~~sp~g~~Ll~gs~-dg~I~iwD~~t~~~i~~l~~----h~~~I~sv~~spd-g~~Lasgs-~D-~I~vwDl~s--- 706 (786)
..+.|+|++++|++++. ++.|.+||..+++++..+.. |......+ ++|+ +.+++++. .+ +|.|||+.+
T Consensus 327 ~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~ 405 (543)
T 1nir_A 327 HDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNH 405 (543)
T ss_dssp CCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred cCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCC
Confidence 67899999998887765 78999999999999888874 55444444 4676 66667765 44 999999998
Q ss_pred ----CeeEEEEccCCCceEEEEEeCCCCEEEEEE-------CCCeEEEEECCCCeEE-EE---------cccCCCeEEEE
Q 044075 707 ----GECIHELSSSGNKFHSCIFHPSYPTLMVIG-------GYQSLELWNMAENKCM-TI---------AAHDCVISALA 765 (786)
Q Consensus 707 ----~~~i~~l~~~~~~I~sv~fspdg~~L~sgs-------~dg~I~IwDl~~~~~~-~~---------~~h~~~V~sla 765 (786)
.+++.++..+...+..+.|+|++++|++++ .+++|.|||+.+.++. .. ..+...|..++
T Consensus 406 ~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 485 (543)
T 1nir_A 406 PQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPE 485 (543)
T ss_dssp TTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEE
T ss_pred chhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEecc
Confidence 899999999988889999999999999987 2679999999987654 32 35678899999
Q ss_pred EcCCCCEEEEEe-----CCCcEEEeC
Q 044075 766 QSPVTGMVASAS-----HDKSVKIWK 786 (786)
Q Consensus 766 fspdg~~LaSgs-----~DG~I~IWd 786 (786)
|+|+|+.|+++. .|+.|.|||
T Consensus 486 ~~~~g~~~~~s~~~~~~~~~~i~v~D 511 (543)
T 1nir_A 486 YNKRGDEVWFSVWNGKNDSSALVVVD 511 (543)
T ss_dssp ECSSSSEEEEEEECCTTSCCEEEEEE
T ss_pred CCCCCCEEEEEeecCCCCCCeEEEEE
Confidence 999999888663 479999997
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=3.8e-24 Score=238.67 Aligned_cols=241 Identities=11% Similarity=0.140 Sum_probs=207.5
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe-CCCcEEEEcCCC
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS-FDKTVRIWDAAK 582 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~I~VWdl~s 582 (786)
.+.+|.+.|.+++|++++.++++++.|+.|++||+.+++.+..+..|...+.+++|+|+++.+++++ .|+.|++||+.+
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~ 243 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT 243 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC
Confidence 4568999999999999999999999999999999999999999999999999999999999886555 799999999988
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEc-------CCCcEEEEeCCCCeeeEee--cCCeEEEEEeCCCCEEEEE-
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCD-------GNSEIRFWNLSQYSCARIS--KGGTVQVRFQPRLGLLLAA- 652 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs-------~Dg~I~iwDl~~~~~~~~~--~~~i~~i~~sp~g~~Ll~g- 652 (786)
++ .+..+.. ...+.+++|+|++..+++++. .|+.|++||+.+++..... ...+..++|+|+++.++++
T Consensus 244 ~~-~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 321 (433)
T 3bws_A 244 KL-EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSD 321 (433)
T ss_dssp TE-EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEE
T ss_pred Cc-EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEe
Confidence 76 3444444 456999999999988775553 5889999999988776654 4577889999999866554
Q ss_pred ECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC---------------C-eEEEEECCCCeeEEEEccC
Q 044075 653 ASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ---------------D-SVRVWSLASGECIHELSSS 716 (786)
Q Consensus 653 s~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~---------------D-~I~vwDl~s~~~i~~l~~~ 716 (786)
+.++.|++||+++++.+..+. +...+.+++|+|++++|++++. | .|++||+.+++.+..+..
T Consensus 322 ~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~- 399 (433)
T 3bws_A 322 MCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA- 399 (433)
T ss_dssp TTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-
T ss_pred cCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-
Confidence 778999999999998888776 7788999999999999988876 3 899999999999888876
Q ss_pred CCceEEEEEeCCCCEEEEEEC-CCeEEEEECCC
Q 044075 717 GNKFHSCIFHPSYPTLMVIGG-YQSLELWNMAE 748 (786)
Q Consensus 717 ~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl~~ 748 (786)
...+.+++|+|++++|++++. |+.|++|++..
T Consensus 400 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 400 GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 467899999999999998886 99999999864
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=3.2e-24 Score=240.63 Aligned_cols=263 Identities=13% Similarity=0.136 Sum_probs=216.3
Q ss_pred EEeecCCCCeEEEEEcC--------------CCCEEEEEECC------CeEEEEEcCCCeeeeecCCCCCCeEEEEEccC
Q 044075 503 SSIRKSSSKVTCCHFSS--------------DGKLLASAGHD------KKVVVWNMENFQTECTPDDHNHIITDVRFRPN 562 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSp--------------dg~~Lasgs~D------g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspd 562 (786)
..+.+|...+.++++++ .+..|+.++.+ +.|++||++. .....+..|...|.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCC
Confidence 45778888888887775 25666666654 7999999974 456677789999999999999
Q ss_pred CCEEEEEeCCC---cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCc--EEEEeCCCCeeeEee--cC
Q 044075 563 STQLATSSFDK---TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSE--IRFWNLSQYSCARIS--KG 635 (786)
Q Consensus 563 g~~Lasgs~Dg---~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~--I~iwDl~~~~~~~~~--~~ 635 (786)
++.|++++.|+ .|++||+.+++ ...+..|...+.+++|+|+++.++++++.++. |++||+.+++..... ..
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~--~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~ 267 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGA--VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS 267 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCC--EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS
T ss_pred CCEEEEEEecCCCcEEEEEECCCCc--EEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC
Confidence 99999999885 99999999876 34566788899999999999988878876655 999999987765443 35
Q ss_pred CeEEEEEeCCCCEEEEEECC-C--eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEECCCCe
Q 044075 636 GTVQVRFQPRLGLLLAAASE-N--VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSLASGE 708 (786)
Q Consensus 636 ~i~~i~~sp~g~~Ll~gs~d-g--~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl~s~~ 708 (786)
.+..++|+|++++|++++.+ + .|++||+.+++. ..+..+...+.+++|+|+|++|++++.+ .|++||+.+++
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 67889999999999988874 4 688889988764 3455577789999999999999888753 79999999987
Q ss_pred eEEEEccCCCceEEEEEeCCCCEEEEEECCC---eEEEEECCCCeEEEEcccCCCeEEEEEcCCCC
Q 044075 709 CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ---SLELWNMAENKCMTIAAHDCVISALAQSPVTG 771 (786)
Q Consensus 709 ~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg---~I~IwDl~~~~~~~~~~h~~~V~slafspdg~ 771 (786)
.. .+..+. .+.+++|+|++++|++++.++ .|++||+..+....+..|.+.|.+++|+|...
T Consensus 347 ~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 347 VQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCCCC
T ss_pred EE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCccccccc
Confidence 64 455553 899999999999999998877 79999999888888999999999999999754
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.8e-24 Score=242.54 Aligned_cols=271 Identities=12% Similarity=0.105 Sum_probs=217.1
Q ss_pred CCeEEEEEcCCCC-EEEEEE----CCC----eEEEEEc--CCCeee--eecCCCCCCeEEEEEcc--------------C
Q 044075 510 SKVTCCHFSSDGK-LLASAG----HDK----KVVVWNM--ENFQTE--CTPDDHNHIITDVRFRP--------------N 562 (786)
Q Consensus 510 ~~V~~lafSpdg~-~Lasgs----~Dg----~V~IWdl--~t~~~~--~~l~~h~~~V~sl~fsp--------------d 562 (786)
..|...+|++.|. ++++|+ .|| .|+|||+ .+++.+ ..+.+|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4577778888764 566776 467 8999999 888877 45788888888887775 1
Q ss_pred CCEEEEEeCC------CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC---CcEEEEeCCCCeeeEee
Q 044075 563 STQLATSSFD------KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN---SEIRFWNLSQYSCARIS 633 (786)
Q Consensus 563 g~~Lasgs~D------g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D---g~I~iwDl~~~~~~~~~ 633 (786)
+..++.++.+ +.|++||+.... ...+..|...|.+++|+|+++.+++ ++.+ ..|++||+.+++.....
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~--~~~l~~~~~~v~~~~~Spdg~~la~-~s~~~~~~~i~~~d~~tg~~~~l~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN--QFVVHRSPQPLMSPAWSPDGSKLAY-VTFESGRSALVIQTLANGAVRQVA 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS--CEEEEEESSCEEEEEECTTSSEEEE-EECTTSSCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC--CEEEeCCCCcceeeEEcCCCCEEEE-EEecCCCcEEEEEECCCCcEEEee
Confidence 5566666554 799999997543 6677788999999999999997774 4444 49999999988776543
Q ss_pred --cCCeEEEEEeCCCCEEE-EEECCC--eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----eEEEEEC
Q 044075 634 --KGGTVQVRFQPRLGLLL-AAASEN--VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----SVRVWSL 704 (786)
Q Consensus 634 --~~~i~~i~~sp~g~~Ll-~gs~dg--~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----~I~vwDl 704 (786)
...+.+++|+|+++.|+ +++.++ .|++||+++++. ..+..|...+.+++|+|||++|++++.+ .|++||+
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~ 298 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI 298 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEEC
Confidence 35678999999999888 445454 499999998876 5666788899999999999999888753 6888899
Q ss_pred CCCeeEEEEccCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCC-
Q 044075 705 ASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY---QSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDK- 780 (786)
Q Consensus 705 ~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d---g~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG- 780 (786)
.+++. ..+..+...+.+++|+|++++|++++.+ ..|++||+.++++..+..|. .+.+++|+|+|++|++++.|+
T Consensus 299 ~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~ 376 (415)
T 2hqs_A 299 NGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGM 376 (415)
T ss_dssp TSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETT
T ss_pred CCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCC
Confidence 88764 3455667788999999999999988865 58999999999887777765 899999999999999888877
Q ss_pred --cEEEeC
Q 044075 781 --SVKIWK 786 (786)
Q Consensus 781 --~I~IWd 786 (786)
.|++||
T Consensus 377 ~~~l~~~d 384 (415)
T 2hqs_A 377 GSVLNLVS 384 (415)
T ss_dssp EEEEEEEE
T ss_pred ccEEEEEE
Confidence 688875
No 127
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4.9e-25 Score=265.92 Aligned_cols=229 Identities=16% Similarity=0.246 Sum_probs=191.3
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcCC--CCEEEEEECCCeEEEEEcCCCe--
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSD--GKLLASAGHDKKVVVWNMENFQ-- 542 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpd--g~~Lasgs~Dg~V~IWdl~t~~-- 542 (786)
++.....+|...++.+.. -....+..+.+|.+.|++++|+++ +++|++|+.||.|+|||+.+++
T Consensus 23 ~latg~~dg~I~vwd~~~------------~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~ 90 (753)
T 3jro_A 23 RLATCSSDKTIKIFEVEG------------ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS 90 (753)
T ss_dssp CEEEEETTTEEEEEEEET------------TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEE
T ss_pred eEEEEECCCcEEEEecCC------------CCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccc
Confidence 444555577777776441 144677888999999999999988 9999999999999999999887
Q ss_pred eeeecCCCCCCeEEEEEccC--CCEEEEEeCCCcEEEEcCCCCc-ceeeeecCCCCCeEEEEEecC------------CC
Q 044075 543 TECTPDDHNHIITDVRFRPN--STQLATSSFDKTVRIWDAAKPN-FCLQTYTGHNNHVMSLDFHPK------------KN 607 (786)
Q Consensus 543 ~~~~l~~h~~~V~sl~fspd--g~~Lasgs~Dg~I~VWdl~s~~-~~~~~~~~h~~~V~sl~~sp~------------g~ 607 (786)
.+..+..|...|++++|+|+ +.+|++|+.||.|++||+.+.. .....+.+|...|.+++|+|. +.
T Consensus 91 ~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~ 170 (753)
T 3jro_A 91 QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 170 (753)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGG
T ss_pred ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCC
Confidence 77788899999999999999 9999999999999999998763 234567789999999999995 23
Q ss_pred eEEEEEcCCCcEEEEeCCCC----eeeEe---ecCCeEEEEEeCC---CCEEEEEECCCeEEEEEcCCCc-----EEEEE
Q 044075 608 DLFCSCDGNSEIRFWNLSQY----SCARI---SKGGTVQVRFQPR---LGLLLAAASENVVSIFDVETDR-----LTHSF 672 (786)
Q Consensus 608 ~ll~sgs~Dg~I~iwDl~~~----~~~~~---~~~~i~~i~~sp~---g~~Ll~gs~dg~I~iwD~~t~~-----~i~~l 672 (786)
.++++|+.||.|++||+++. ..... +...+.+++|+|+ +.+|++++.||.|++||++++. .+...
T Consensus 171 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~ 250 (753)
T 3jro_A 171 RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKE 250 (753)
T ss_dssp CCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSS
T ss_pred CEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEecc
Confidence 45668999999999999876 33332 3467899999999 8999999999999999999864 23333
Q ss_pred ecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC
Q 044075 673 KGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG 707 (786)
Q Consensus 673 ~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~ 707 (786)
..|...|.+++|+|++.+|++++.| .|++||+..+
T Consensus 251 ~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 251 EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp SCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 4588999999999999999999999 9999999864
No 128
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=2.1e-22 Score=217.32 Aligned_cols=267 Identities=10% Similarity=0.039 Sum_probs=217.9
Q ss_pred CCCeEEEEEcCCCCEEEEEEC-------CCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEE-eCCCcEEEEcC
Q 044075 509 SSKVTCCHFSSDGKLLASAGH-------DKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATS-SFDKTVRIWDA 580 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~-------Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasg-s~Dg~I~VWdl 580 (786)
...+..++|+|++++|++++. ++.|.+||..+++.+..+... ..+.+++|+|++++++++ ..++.|.+||+
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 356889999999999888874 568999999999888877543 347889999999966555 55799999999
Q ss_pred CCCcceeeeecCCCC---------CeEEEEEecCCCeEEEEE-cCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCC
Q 044075 581 AKPNFCLQTYTGHNN---------HVMSLDFHPKKNDLFCSC-DGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLG 647 (786)
Q Consensus 581 ~s~~~~~~~~~~h~~---------~V~sl~~sp~g~~ll~sg-s~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~ 647 (786)
.+++. +..+..+.. .+.+++|+|+++.+++++ +.++.|.+||+.+++...... ..+..++|+|+++
T Consensus 119 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 119 KTGEV-KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp TTCCE-EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred CCCee-EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence 98773 444443322 278999999999888776 468899999999988877655 3367899999999
Q ss_pred EEEEEECCCeEEEEEcCCCcEEEEEec----CCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCCCceE
Q 044075 648 LLLAAASENVVSIFDVETDRLTHSFKG----HSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSGNKFH 721 (786)
Q Consensus 648 ~Ll~gs~dg~I~iwD~~t~~~i~~l~~----h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~~~I~ 721 (786)
++++++.++.|.+||..+++.+..+.. +...+.+++|+|+++++++++.+ .|.+||+.+++.+..+.... ..
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~ 275 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SL 275 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CC
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--Cc
Confidence 999999999999999999988887764 55678899999999988777654 89999999999888876543 25
Q ss_pred EEEEeCCCCEEEEEE-CCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCC
Q 044075 722 SCIFHPSYPTLMVIG-GYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHD 779 (786)
Q Consensus 722 sv~fspdg~~L~sgs-~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~D 779 (786)
.++|+|+++++++++ .++.|.+||+.+++.+........+.+++|+|++++|+.+..+
T Consensus 276 ~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 276 AVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred eEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 689999999877777 5789999999999988666666689999999999977766655
No 129
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=2e-23 Score=250.06 Aligned_cols=274 Identities=13% Similarity=0.127 Sum_probs=216.6
Q ss_pred CCCeEEEEEcCCCCEEEEEEC-CC-----eEEEEEcCCCeeeeecCCCCC------------------------CeEEEE
Q 044075 509 SSKVTCCHFSSDGKLLASAGH-DK-----KVVVWNMENFQTECTPDDHNH------------------------IITDVR 558 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~-Dg-----~V~IWdl~t~~~~~~l~~h~~------------------------~V~sl~ 558 (786)
...|.+++|||||++|++++. |+ .|++||+.+++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 899999999887766654432 388999
Q ss_pred EccCCCEEEEEeCCCcEEEEcCCCCc-ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC-
Q 044075 559 FRPNSTQLATSSFDKTVRIWDAAKPN-FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG- 636 (786)
Q Consensus 559 fspdg~~Lasgs~Dg~I~VWdl~s~~-~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~- 636 (786)
|+|||++|++++. +.|++||+.++. .....+..|...+.+++|+|+|+.++++. ++.|++||+.+++........
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~--~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR--GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE--TTEEEEEETTTTEEEECCCCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe--CCcEEEEecCCCCEEEeccCCc
Confidence 9999999999986 999999998861 01445667788899999999999776443 569999999988776654422
Q ss_pred ------------------eEEEEEeCCCCEEEEEECCC---------------------------------eEEEEEcCC
Q 044075 637 ------------------TVQVRFQPRLGLLLAAASEN---------------------------------VVSIFDVET 665 (786)
Q Consensus 637 ------------------i~~i~~sp~g~~Ll~gs~dg---------------------------------~I~iwD~~t 665 (786)
+..+.|+|++++|++++.|+ .|++||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 36789999999999988765 889999998
Q ss_pred -CcEEEEEe--cCCCCEEEEEEcCCCCEEEEEeC-----C-eEEEEECCCCeeEEEEccCCC----ceEEEEEeCCCCEE
Q 044075 666 -DRLTHSFK--GHSTEIHSVCWDTNGEYLASVSQ-----D-SVRVWSLASGECIHELSSSGN----KFHSCIFHPSYPTL 732 (786)
Q Consensus 666 -~~~i~~l~--~h~~~I~sv~~spdg~~Lasgs~-----D-~I~vwDl~s~~~i~~l~~~~~----~I~sv~fspdg~~L 732 (786)
++...... .|...+.+++| |||++|++++. + .|++||+.++++...+..+.. .+..++|+|+++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEE
Confidence 87655443 37788999999 99999987653 3 799999999987776655443 44688999999988
Q ss_pred EEEECCCeEEEEECC-CCeEEEEcccCCCeEEE-EEcCCCCEEE-EEeCCC--cEEEeC
Q 044075 733 MVIGGYQSLELWNMA-ENKCMTIAAHDCVISAL-AQSPVTGMVA-SASHDK--SVKIWK 786 (786)
Q Consensus 733 ~sgs~dg~I~IwDl~-~~~~~~~~~h~~~V~sl-afspdg~~La-Sgs~DG--~I~IWd 786 (786)
++++.++.++||.+. ++....+..|...|.++ .|+|+++.|+ +++.|+ .++||+
T Consensus 352 ~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 352 WSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp EEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred EEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 888888876676554 23356677888889887 5999999775 455555 888984
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=5e-23 Score=239.11 Aligned_cols=266 Identities=10% Similarity=0.090 Sum_probs=214.4
Q ss_pred EEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcC--CCCcceeeeecCC
Q 044075 516 HFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDA--AKPNFCLQTYTGH 593 (786)
Q Consensus 516 afSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl--~s~~~~~~~~~~h 593 (786)
+|+|++.++++++.|++|.+||..+++++.++..+.. +.+++|+|++++|++++.|++|++||+ .+.+ ++..+. +
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~-~~~~i~-~ 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT-KVAEIK-I 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE-EEEEEE-C
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCc-EEEEEe-c
Confidence 3889999999999999999999999999998874333 899999999999999999999999999 6655 455555 4
Q ss_pred CCCeEEEEEec----CCCeEEEEEcCCCcEEEEeCCCCeeeEeecC--------------CeEEEEEeCCCCEEEEEE-C
Q 044075 594 NNHVMSLDFHP----KKNDLFCSCDGNSEIRFWNLSQYSCARISKG--------------GTVQVRFQPRLGLLLAAA-S 654 (786)
Q Consensus 594 ~~~V~sl~~sp----~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~--------------~i~~i~~sp~g~~Ll~gs-~ 654 (786)
...+.+++|+| +++.+++++..++.|.+||..+.+++..+.. .+..+.+++++..+++.. .
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 56689999999 9998887776799999999999887765542 467889999887765554 5
Q ss_pred CCeEEEEEcCCCcEEE--EEecCCCCEEEEEEcCCCCEEEEEeC-C-eEEEEECCCCeeEEEEcc----CCCceEEEEEe
Q 044075 655 ENVVSIFDVETDRLTH--SFKGHSTEIHSVCWDTNGEYLASVSQ-D-SVRVWSLASGECIHELSS----SGNKFHSCIFH 726 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~--~l~~h~~~I~sv~~spdg~~Lasgs~-D-~I~vwDl~s~~~i~~l~~----~~~~I~sv~fs 726 (786)
++.|.+||+.+.+.+. .+. +...+.++.|+|+|++|++++. + +|.+||+.+++++..+.. |.+....+ ++
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~ 378 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VH 378 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EE
T ss_pred CCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CC
Confidence 7999999998865433 443 6677889999999998877664 4 999999999999988874 43333333 57
Q ss_pred CCC-CEEEEEE-CCCeEEEEECCC-------CeEE-EEcccCCCeEEEEEcCCCCEEEEEe-------CCCcEEEeC
Q 044075 727 PSY-PTLMVIG-GYQSLELWNMAE-------NKCM-TIAAHDCVISALAQSPVTGMVASAS-------HDKSVKIWK 786 (786)
Q Consensus 727 pdg-~~L~sgs-~dg~I~IwDl~~-------~~~~-~~~~h~~~V~slafspdg~~LaSgs-------~DG~I~IWd 786 (786)
|++ ..++++. .|++|.+||+.+ .+++ ++..|...+..++|+|++++|++++ .+++|.|||
T Consensus 379 p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d 455 (543)
T 1nir_A 379 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFD 455 (543)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEE
T ss_pred CCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEE
Confidence 874 4444444 578999999988 6666 6667888889999999999999987 277999996
No 131
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=3.4e-23 Score=223.17 Aligned_cols=254 Identities=9% Similarity=0.055 Sum_probs=180.8
Q ss_pred cccccccccceeeeeEEeecCCCCeEEEEEcCCCCEEEEEE--CCCeEEEEEc--CCC----eeeeecCCCCCCeEEEEE
Q 044075 488 EQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAG--HDKKVVVWNM--ENF----QTECTPDDHNHIITDVRF 559 (786)
Q Consensus 488 ~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs--~Dg~V~IWdl--~t~----~~~~~l~~h~~~V~sl~f 559 (786)
...|.......|+.+.++..|..+|..+.|.||..-|++.. .=..-.|+.+ ... .......+|...|.++
T Consensus 65 v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l-- 142 (356)
T 2w18_A 65 VSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL-- 142 (356)
T ss_dssp EEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE--
T ss_pred EEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec--
Confidence 34556666678889999999998888888888654333221 1111111111 111 1111112344344443
Q ss_pred ccCCCEEEEEe--CCCcEEEEcCCCCcceeeeecCCCCCeEEEEEec--CCCeEEEEEcCCCcEEEEeCCCCeeeEeecC
Q 044075 560 RPNSTQLATSS--FDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP--KKNDLFCSCDGNSEIRFWNLSQYSCARISKG 635 (786)
Q Consensus 560 spdg~~Lasgs--~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp--~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~ 635 (786)
++++++.+++ .|+.|++|++......+..+..|...+..++|++ ....++++++.|++|++||+++++++..+.+
T Consensus 143 -~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g 221 (356)
T 2w18_A 143 -TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI 221 (356)
T ss_dssp -TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred -CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcC
Confidence 4555555533 5899999999554446777788998999999988 2344667999999999999999998887763
Q ss_pred ------CeEEEEEeCCCCEE------------EEEECCCeEEEEEcCCCcEEEEE-----ecCCCCEEEEEEcCCCCEEE
Q 044075 636 ------GTVQVRFQPRLGLL------------LAAASENVVSIFDVETDRLTHSF-----KGHSTEIHSVCWDTNGEYLA 692 (786)
Q Consensus 636 ------~i~~i~~sp~g~~L------------l~gs~dg~I~iwD~~t~~~i~~l-----~~h~~~I~sv~~spdg~~La 692 (786)
.+.+++|+|++..+ ++|+.|++|++||..+++.+..+ .+|...+.+..++ +.+++
T Consensus 222 ~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lA 299 (356)
T 2w18_A 222 DDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAA 299 (356)
T ss_dssp CC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEE
T ss_pred CCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEE
Confidence 34567899999876 45677899999999999887765 3666666555544 88999
Q ss_pred EEeCC-eEEEEECCCCeeEEEEccCCCceE-EEEEeCCCCEEEEEECCCeEEEEEC
Q 044075 693 SVSQD-SVRVWSLASGECIHELSSSGNKFH-SCIFHPSYPTLMVIGGYQSLELWNM 746 (786)
Q Consensus 693 sgs~D-~I~vwDl~s~~~i~~l~~~~~~I~-sv~fspdg~~L~sgs~dg~I~IwDl 746 (786)
+++.| +|+|||+.+++++.++.+|...+. .++|+|++++|++|+.|++|+|||+
T Consensus 300 SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 300 AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99999 999999999999999998877655 5899999999999999999999995
No 132
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.92 E-value=2.9e-24 Score=238.75 Aligned_cols=250 Identities=14% Similarity=0.127 Sum_probs=159.2
Q ss_pred eEeccCCCCceeeeccccCCCcccccccccceeeeeEEeecCCCCeEEEEEcC--------CCCEEEEEECCCeEEEEEc
Q 044075 467 FLSQDDGDGRDLFGTLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSS--------DGKLLASAGHDKKVVVWNM 538 (786)
Q Consensus 467 ~l~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~H~~~V~~lafSp--------dg~~Lasgs~Dg~V~IWdl 538 (786)
+++....|+...++..... .......+..+.+|.+.|++++|+| |+++||+|+.|++|+|||+
T Consensus 103 ~las~~~d~~v~lw~~~~~---------~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNE---------TIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp EEEEEETTSCEEEEEEETT---------EEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred EEEEEeCCCcEEEEECCCC---------ccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 4555555666666654322 1223345667889999999999998 8899999999999999999
Q ss_pred CCCeeeeecCCCCCCeEEEEEccCC-CEEEEEeCCCcEEEEcCCCCcceeeeecCC----CCCeEEEEEecCCCeEEEEE
Q 044075 539 ENFQTECTPDDHNHIITDVRFRPNS-TQLATSSFDKTVRIWDAAKPNFCLQTYTGH----NNHVMSLDFHPKKNDLFCSC 613 (786)
Q Consensus 539 ~t~~~~~~l~~h~~~V~sl~fspdg-~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h----~~~V~sl~~sp~g~~ll~sg 613 (786)
.+...+..+..|...|.+++|+|++ .+|++++.|++|++||+.++.... ....+ ...+....+.+......
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~--- 249 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAE-ENSQTELVKNPWLLTLNTLPLVNTCH--- 249 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-----------CSCCCSEEEESGGGC-------
T ss_pred CCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccc-cccccCCcccceEEecccccceeeee---
Confidence 9988888888999999999999987 489999999999999998765321 11111 11111111111100000
Q ss_pred cCCCcEEEEeCCCCeeeEeecCCeEEEEEe-CCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEE-----------
Q 044075 614 DGNSEIRFWNLSQYSCARISKGGTVQVRFQ-PRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHS----------- 681 (786)
Q Consensus 614 s~Dg~I~iwDl~~~~~~~~~~~~i~~i~~s-p~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~s----------- 681 (786)
...+...+.++.|. +++..+++++.|+.+++||+..+.....+..|...+..
T Consensus 250 ----------------~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 313 (393)
T 4gq1_A 250 ----------------SSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGIS 313 (393)
T ss_dssp ------------------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEEC
T ss_pred ----------------cccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccc
Confidence 00112334445543 55566666666666666666555444444333333322
Q ss_pred -------EEEcC--CCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 044075 682 -------VCWDT--NGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNM 746 (786)
Q Consensus 682 -------v~~sp--dg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl 746 (786)
++|++ ++.++++|+.| .|+|||+.+++++..+..|..+|.+++|+|+|++|++++.+| +.+|.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 314 LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 23333 34466777778 999999999998888888999999999999999999998765 656654
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=2.6e-22 Score=215.44 Aligned_cols=268 Identities=9% Similarity=0.143 Sum_probs=202.7
Q ss_pred EEcCCCCE-EEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeC-CCcEEEEcCCCCcceeeeecCC
Q 044075 516 HFSSDGKL-LASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSF-DKTVRIWDAAKPNFCLQTYTGH 593 (786)
Q Consensus 516 afSpdg~~-Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~-Dg~I~VWdl~s~~~~~~~~~~h 593 (786)
.|.+++.+ +++++.++.|.+||+.+++.+..+..+...+ +++|+|++++|++++. ++.|.+||+.+++.....+..+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 45565555 6777789999999999999988887777777 9999999997777666 8899999999877435556666
Q ss_pred CCCeEEEEEecCCCeEEEEEcCC-C--cEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEEC-CCe-EEEEEcCCC
Q 044075 594 NNHVMSLDFHPKKNDLFCSCDGN-S--EIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAAS-ENV-VSIFDVETD 666 (786)
Q Consensus 594 ~~~V~sl~~sp~g~~ll~sgs~D-g--~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~-dg~-I~iwD~~t~ 666 (786)
..++.+++|+|+++.++ ++..+ + .|.+||+.+++.+.... .....++|+|+++++++++. ++. |.+|++...
T Consensus 83 ~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 66666699999999888 55444 3 89999999988776554 45688999999987666654 578 999998864
Q ss_pred cEE----EEEecCCCCEEEEEEcCCCCEEEEEeC-C-eEEEEECCCCee---EEEEccCCCceEEEEEeCCCCEEEEEEC
Q 044075 667 RLT----HSFKGHSTEIHSVCWDTNGEYLASVSQ-D-SVRVWSLASGEC---IHELSSSGNKFHSCIFHPSYPTLMVIGG 737 (786)
Q Consensus 667 ~~i----~~l~~h~~~I~sv~~spdg~~Lasgs~-D-~I~vwDl~s~~~---i~~l~~~~~~I~sv~fspdg~~L~sgs~ 737 (786)
..+ .........+.+++|+|+|+++++++. + .|.+||+.+++. +..+.. ...+..++|+|++++++++..
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECS
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEc
Confidence 322 122234566899999999997766654 5 899999999887 777764 366788999999998877664
Q ss_pred -CCeEEEEECCCCeEEEE---ccc----C---CCeEEEEEcCCCCEEEEEeC-CCcEEEeC
Q 044075 738 -YQSLELWNMAENKCMTI---AAH----D---CVISALAQSPVTGMVASASH-DKSVKIWK 786 (786)
Q Consensus 738 -dg~I~IwDl~~~~~~~~---~~h----~---~~V~slafspdg~~LaSgs~-DG~I~IWd 786 (786)
++.|.+||+.+++...+ ..+ . ..+.+++|+||+++|++++. ++.|.|||
T Consensus 241 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d 301 (331)
T 3u4y_A 241 STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFT 301 (331)
T ss_dssp SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEE
Confidence 67899999999887321 111 1 22356899999998866554 56999996
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=2.4e-22 Score=215.46 Aligned_cols=262 Identities=11% Similarity=0.179 Sum_probs=192.8
Q ss_pred EEEEEECCCeEEEEEcC-CC--eeeeecCCCCCCeEEEEEccCCCEEEEEeCC-CcEEEEcCC--CCcc-eeeeecCCCC
Q 044075 523 LLASAGHDKKVVVWNME-NF--QTECTPDDHNHIITDVRFRPNSTQLATSSFD-KTVRIWDAA--KPNF-CLQTYTGHNN 595 (786)
Q Consensus 523 ~Lasgs~Dg~V~IWdl~-t~--~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D-g~I~VWdl~--s~~~-~~~~~~~h~~ 595 (786)
++++++.|+.|++|+++ ++ +.+.. ..|...+.+++|+|++++|++++.+ +.|++|++. ++.. .+..+..+ .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~ 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-G 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-S
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-C
Confidence 34444779999999996 33 23333 3467789999999999999988886 999999997 4442 22334333 3
Q ss_pred CeEEEEEecCCCeEEEEEcCCCcEEEEeCC---CCeeeEeec--CCeEEEEEeCCCCEEEEEE-CCCeEEEEEcCC-CcE
Q 044075 596 HVMSLDFHPKKNDLFCSCDGNSEIRFWNLS---QYSCARISK--GGTVQVRFQPRLGLLLAAA-SENVVSIFDVET-DRL 668 (786)
Q Consensus 596 ~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~---~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs-~dg~I~iwD~~t-~~~ 668 (786)
.+.+++|+|+++.+++++..++.|.+||+. ..+...... ..+..++|+|+++++++++ .++.|.+||+.+ ++.
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 789999999999888888889999999994 333443333 4577899999999998888 789999999987 644
Q ss_pred EE----EEec-CCCCEEEEEEcCCCCEEEEEe-CC-eEEEEECCC--Cee--EEEEcc---C---CCceEEEEEeCCCCE
Q 044075 669 TH----SFKG-HSTEIHSVCWDTNGEYLASVS-QD-SVRVWSLAS--GEC--IHELSS---S---GNKFHSCIFHPSYPT 731 (786)
Q Consensus 669 i~----~l~~-h~~~I~sv~~spdg~~Lasgs-~D-~I~vwDl~s--~~~--i~~l~~---~---~~~I~sv~fspdg~~ 731 (786)
.. .+.. ....+.+++|+|++++|++++ .+ .|.+||+.. ++. +..+.. . ...+..++|+|++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE
Confidence 32 2232 345788999999999877665 45 999999953 432 333321 1 235678999999998
Q ss_pred EEEEE-CCCeEEEEECC--CC--eEEEEcccCCCeEEEEEcCCCCEEEEEe-CCCcEEEeC
Q 044075 732 LMVIG-GYQSLELWNMA--EN--KCMTIAAHDCVISALAQSPVTGMVASAS-HDKSVKIWK 786 (786)
Q Consensus 732 L~sgs-~dg~I~IwDl~--~~--~~~~~~~h~~~V~slafspdg~~LaSgs-~DG~I~IWd 786 (786)
|+++. .++.|.+||+. ++ +.+........+.+++|+|++++|++++ .|+.|.||+
T Consensus 245 l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 245 LYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp EEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred EEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEE
Confidence 88666 68899999998 33 2332223333489999999999888887 689999993
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=1.5e-22 Score=211.07 Aligned_cols=251 Identities=11% Similarity=0.096 Sum_probs=195.2
Q ss_pred EECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC-CcceeeeecCC-CCCeEEEEEec
Q 044075 527 AGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK-PNFCLQTYTGH-NNHVMSLDFHP 604 (786)
Q Consensus 527 gs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s-~~~~~~~~~~h-~~~V~sl~~sp 604 (786)
++.|+.|++||+.+++.. .+..|...|.+++|+|++++|++++ ++.|++||+.+ ++ .......+ ...|.+++|+|
T Consensus 18 ~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS-PEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS-CEECCCTTCCCBCSCCEECT
T ss_pred CCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC-ceEeccccccccccceEECC
Confidence 457899999999988776 4446888999999999999999987 78999999988 65 34444444 47789999999
Q ss_pred CCCeEEEEEc-CC--CcEEEEeCCCCeeeEee-cCCeEEEEEeCCCCEEE-EEECCCeEEEEEcCC-CcEEEEEecCCCC
Q 044075 605 KKNDLFCSCD-GN--SEIRFWNLSQYSCARIS-KGGTVQVRFQPRLGLLL-AAASENVVSIFDVET-DRLTHSFKGHSTE 678 (786)
Q Consensus 605 ~g~~ll~sgs-~D--g~I~iwDl~~~~~~~~~-~~~i~~i~~sp~g~~Ll-~gs~dg~I~iwD~~t-~~~i~~l~~h~~~ 678 (786)
++..+++++. .+ ..|..|++......... ...+..++|+|+++.|+ ++..++.+.+|+++. ......+..+...
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 174 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGR 174 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSC
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCc
Confidence 9998775552 23 44555555555443332 24577889999999887 677889888888642 2334556668889
Q ss_pred EEEEEEcCCCCEEEEEeC-C-eEEEEECC-CCeeEEEEccCCCceEEEEEeCCCCEEEEEECC-----------CeEEEE
Q 044075 679 IHSVCWDTNGEYLASVSQ-D-SVRVWSLA-SGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY-----------QSLELW 744 (786)
Q Consensus 679 I~sv~~spdg~~Lasgs~-D-~I~vwDl~-s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d-----------g~I~Iw 744 (786)
+.+++|+|++++|++++. + .++||++. .+..+..+..+...+..+.|+|++++|++++.+ +.|++|
T Consensus 175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 999999999998887764 5 88888876 556677787777889999999999999988876 569999
Q ss_pred ECCCCeEE---EEcccCCCeEEEEEcCCCCEEEEEeCCC
Q 044075 745 NMAENKCM---TIAAHDCVISALAQSPVTGMVASASHDK 780 (786)
Q Consensus 745 Dl~~~~~~---~~~~h~~~V~slafspdg~~LaSgs~DG 780 (786)
|+.+++.. .+..|...|.+++|+|++++|++++.|.
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 255 DMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp ETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred ecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 99987654 3447888999999999999988887664
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=1.1e-21 Score=209.68 Aligned_cols=259 Identities=11% Similarity=0.071 Sum_probs=203.2
Q ss_pred CEEEEEECCCeEEEEEcCCCeeeeecCCCCC--CeEEEEEccCCCEEE-EEeCCCcEEEEcCCCCcceeeeec-CC----
Q 044075 522 KLLASAGHDKKVVVWNMENFQTECTPDDHNH--IITDVRFRPNSTQLA-TSSFDKTVRIWDAAKPNFCLQTYT-GH---- 593 (786)
Q Consensus 522 ~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~--~V~sl~fspdg~~La-sgs~Dg~I~VWdl~s~~~~~~~~~-~h---- 593 (786)
++|++++.++.|.+||+.+++.+..+..... .+.+++|+|+++.++ ++..++.|.+||+.+++. +..+. .+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET-LGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE-EEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe-EeeEEcCCcccc
Confidence 4789999999999999999998887753332 478999999998765 455578999999988763 33333 22
Q ss_pred CCCeEEEEEecCCCeEEEEEc-----------CCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECCCeEEE
Q 044075 594 NNHVMSLDFHPKKNDLFCSCD-----------GNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASENVVSI 660 (786)
Q Consensus 594 ~~~V~sl~~sp~g~~ll~sgs-----------~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~dg~I~i 660 (786)
...+.+++|+|+++.++++.. .++.|.+||+.+++...... ..+..++|+|++++++++ ++.|++
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEE
Confidence 226788999999988775541 47999999999887766544 456778999999988888 689999
Q ss_pred EEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-------------------------eEEEEECCCCeeE-EEEc
Q 044075 661 FDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-------------------------SVRVWSLASGECI-HELS 714 (786)
Q Consensus 661 wD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-------------------------~I~vwDl~s~~~i-~~l~ 714 (786)
||+.+++.+..+..+.. ...+.|+|++.+++..+.+ .|.+||+.+++.. ..+.
T Consensus 159 ~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 237 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVR 237 (337)
T ss_dssp EETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEE
T ss_pred EECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecC
Confidence 99999988877765431 1123789999877655433 2689999998764 2334
Q ss_pred cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 715 SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 715 ~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.+...+.+++|+|++++++++ ++.|++||+.+++.+........+.+++|+|++++|++++.|+.|++||
T Consensus 238 ~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 238 IMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp ECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred CCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEE
Confidence 455678899999999999888 6899999999998876655666789999999999999999999999996
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=7.5e-21 Score=204.01 Aligned_cols=265 Identities=11% Similarity=0.135 Sum_probs=197.5
Q ss_pred eEEeecCCCCeEEEEEcCCCCEEEEEEC-CCeEEEEEcCCCee-eeecCCCCCCeEEEEEccCCCEEEEEeCCC---cEE
Q 044075 502 VSSIRKSSSKVTCCHFSSDGKLLASAGH-DKKVVVWNMENFQT-ECTPDDHNHIITDVRFRPNSTQLATSSFDK---TVR 576 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpdg~~Lasgs~-Dg~V~IWdl~t~~~-~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg---~I~ 576 (786)
+..+..+...+ +++|+|+|++|++++. ++.|.+||+.+++. ...+..+..++.+++|+|++++|+++..++ .|.
T Consensus 33 ~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 33 LNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQ 111 (331)
T ss_dssp EEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEE
T ss_pred eeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEE
Confidence 33444556667 9999999997776665 88999999999887 777777776666699999999999555553 899
Q ss_pred EEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCc-EEEEeCCCCeee-----Ee--ecCCeEEEEEeCCCCE
Q 044075 577 IWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSE-IRFWNLSQYSCA-----RI--SKGGTVQVRFQPRLGL 648 (786)
Q Consensus 577 VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~-I~iwDl~~~~~~-----~~--~~~~i~~i~~sp~g~~ 648 (786)
+||+.+++ .+..+.. ...+.+++|+|+++.+++++..++. |.+|++.....+ .. .......++|+|++++
T Consensus 112 v~d~~~~~-~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~ 189 (331)
T 3u4y_A 112 SYSFLKNK-FISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNF 189 (331)
T ss_dssp EEETTTTE-EEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSE
T ss_pred EEECCCCC-eEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCE
Confidence 99998876 3444443 4457999999999988888777788 999998753322 11 1245688999999997
Q ss_pred EEEEE-CCCeEEEEEcCCCcE---EEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCee--EEEEccC----
Q 044075 649 LLAAA-SENVVSIFDVETDRL---THSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGEC--IHELSSS---- 716 (786)
Q Consensus 649 Ll~gs-~dg~I~iwD~~t~~~---i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~--i~~l~~~---- 716 (786)
+++++ .++.|.+||+.+++. +..+. ....+.+++|+|+|++|++++.+ .|.+||+.+++. +..+...
T Consensus 190 l~v~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 268 (331)
T 3u4y_A 190 AFVANLIGNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLID 268 (331)
T ss_dssp EEEEETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCC
T ss_pred EEEEeCCCCeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccC
Confidence 77766 478999999999887 77776 44667899999999988777654 899999999876 4444322
Q ss_pred CCc---eEEEEEeCCCCEEEEEECC-CeEEEEECCCCeEEEEcccCCCeEEEEEcCCC
Q 044075 717 GNK---FHSCIFHPSYPTLMVIGGY-QSLELWNMAENKCMTIAAHDCVISALAQSPVT 770 (786)
Q Consensus 717 ~~~---I~sv~fspdg~~L~sgs~d-g~I~IwDl~~~~~~~~~~h~~~V~slafspdg 770 (786)
... ...++|+|++++|++++.+ +.|.+||+.+.....+......-....++|+.
T Consensus 269 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~g~~~~~~~~~ 326 (331)
T 3u4y_A 269 PRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYVAGIEANGGIAICHPDK 326 (331)
T ss_dssp CGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECTTCCCBSCEEECCCC-
T ss_pred CCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccceecccccCCeEEECCcc
Confidence 222 2458999999999877765 59999999987766555444333334444443
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=1.1e-22 Score=242.69 Aligned_cols=273 Identities=12% Similarity=0.124 Sum_probs=208.0
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCC---CeEEEEEccCCCEEEEEeCC---------CcEEEE
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNH---IITDVRFRPNSTQLATSSFD---------KTVRIW 578 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~---~V~sl~fspdg~~Lasgs~D---------g~I~VW 578 (786)
.+.+++|+|||+++++ +.||.|++||+.+++....+..|.. .|.+++|+|||++|++++.+ +.|++|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4778999999998776 7899999999999988888877765 49999999999999999874 788899
Q ss_pred cCCCCcce-eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC---C------------------
Q 044075 579 DAAKPNFC-LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKG---G------------------ 636 (786)
Q Consensus 579 dl~s~~~~-~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~---~------------------ 636 (786)
|+.+++.. +.....|...+.+++|+|+|+.++++. ++.|++||+.+++....... .
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~ 174 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF--ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT 174 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE--TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred ECCCCceEeccCCccccccccccEECCCCCEEEEEE--CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccC
Confidence 99887631 122234455589999999999887544 37999999998876655432 1
Q ss_pred eEEEEEeCCCCEEEEEECCC----------------------------------eEEEEEcCCCcEEEEEecC------C
Q 044075 637 TVQVRFQPRLGLLLAAASEN----------------------------------VVSIFDVETDRLTHSFKGH------S 676 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~dg----------------------------------~I~iwD~~t~~~i~~l~~h------~ 676 (786)
+..++|+|+|+.|++++.++ .|++||+.+++....+..+ .
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~ 254 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMRE 254 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSS
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCcc
Confidence 26799999999999987653 7999999988765566544 5
Q ss_pred CCEEEEEEcCCCCEEEEEeC----C-eEEEEECCCCeeEEEEccC-CCce----EEEEEeCCCCEEEEE--ECCC-----
Q 044075 677 TEIHSVCWDTNGEYLASVSQ----D-SVRVWSLASGECIHELSSS-GNKF----HSCIFHPSYPTLMVI--GGYQ----- 739 (786)
Q Consensus 677 ~~I~sv~~spdg~~Lasgs~----D-~I~vwDl~s~~~i~~l~~~-~~~I----~sv~fspdg~~L~sg--s~dg----- 739 (786)
..+.+++|+|||++|++.+. + .|++||+.++++...+..+ ...+ ..++|+|+|+.|+.. ..++
T Consensus 255 ~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 334 (723)
T 1xfd_A 255 YYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKF 334 (723)
T ss_dssp EEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCE
T ss_pred ceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcce
Confidence 67899999999998876642 2 6999999999877665432 3333 378999999977754 4566
Q ss_pred -eEEEEE-CCCCe---EEEEcccCCCeEE-EEEcCCCCEEEEEeCC---CcEEEeC
Q 044075 740 -SLELWN-MAENK---CMTIAAHDCVISA-LAQSPVTGMVASASHD---KSVKIWK 786 (786)
Q Consensus 740 -~I~IwD-l~~~~---~~~~~~h~~~V~s-lafspdg~~LaSgs~D---G~I~IWd 786 (786)
.|++|| ..++. ...+..+...+.. ++|+||++.|+..+.+ +.++||+
T Consensus 335 ~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 335 YHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp EEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred eEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 577788 45555 4445444445554 6999999998766655 7888884
No 139
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=6.2e-22 Score=230.98 Aligned_cols=268 Identities=9% Similarity=0.032 Sum_probs=208.7
Q ss_pred CCCeEEEEEcCCCCEEEEEEC-CCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeC---CCcEEEEcCCC--
Q 044075 509 SSKVTCCHFSSDGKLLASAGH-DKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSF---DKTVRIWDAAK-- 582 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~-Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~---Dg~I~VWdl~s-- 582 (786)
..+|.+++|+|||+.||+++. ||++.||++++++.......+...|.+++|+|| +++++++. +...+||.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 457999999999999999887 999999999776665544444468999999999 77777775 45566665543
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECC----CeE
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASE----NVV 658 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~d----g~I 658 (786)
..... .+..+ ..+...+|+|+++.++++.+.++.+.+||+.+++...........++|+|+|++|++++.+ ..|
T Consensus 100 ~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~i 177 (582)
T 3o4h_A 100 PGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSL 177 (582)
T ss_dssp TTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEE
T ss_pred CCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeEE
Confidence 22222 33322 2355778999998766566556666699999988776665444889999999999988877 789
Q ss_pred EEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC---eEEEEECCCCeeEEEEccCCCceEEEE--------EeC
Q 044075 659 SIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD---SVRVWSLASGECIHELSSSGNKFHSCI--------FHP 727 (786)
Q Consensus 659 ~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D---~I~vwDl~s~~~i~~l~~~~~~I~sv~--------fsp 727 (786)
++||+.+++.. .+..|...+..++|+|||++|+++..+ .|++||+.+++.. .+..+...+..++ |+|
T Consensus 178 ~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~sp 255 (582)
T 3o4h_A 178 FTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLP 255 (582)
T ss_dssp EEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECT
T ss_pred EEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcC
Confidence 99999988765 566788889999999999999976655 6999999999887 7777766676667 999
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCc---EEEeC
Q 044075 728 SYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKS---VKIWK 786 (786)
Q Consensus 728 dg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~---I~IWd 786 (786)
+|..+++++.++.++||++ ++... .+.+.|.+++|+ ++.++++++.+.. |.+||
T Consensus 256 dg~~~~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 256 DGRLAVVARREGRSAVFID--GERVE--APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp TSCEEEEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred CCcEEEEEEcCCcEEEEEE--CCeec--cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 9988889999999999999 66544 345779999999 9999998887754 55554
No 140
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=2.6e-21 Score=241.60 Aligned_cols=277 Identities=9% Similarity=0.046 Sum_probs=228.2
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC-CeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN-FQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t-~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
....+.+|...|.++.|+++ .++++++.|+.+.||.++. +.....+..|. .+..++|+|||+.|+++. ++.|++||
T Consensus 195 ~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d 271 (1045)
T 1k32_A 195 AFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFN 271 (1045)
T ss_dssp EEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEEC
T ss_pred CeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEec
Confidence 34556889999999999998 6777788889999998753 44455665665 467789999999888875 89999999
Q ss_pred CCCCcceeeeecC-----------CCCCeEEEEEe-cCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--C-CeEEEEEeC
Q 044075 580 AAKPNFCLQTYTG-----------HNNHVMSLDFH-PKKNDLFCSCDGNSEIRFWNLSQYSCARISK--G-GTVQVRFQP 644 (786)
Q Consensus 580 l~s~~~~~~~~~~-----------h~~~V~sl~~s-p~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~-~i~~i~~sp 644 (786)
+.... +..+.. |...+.+++|+ |++..+++++ ++.|++|++..+....... . .+..++|+
T Consensus 272 ~~~~~--l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s- 346 (1045)
T 1k32_A 272 PDTEK--IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD- 346 (1045)
T ss_dssp TTTCC--EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TTEEEEECTTSSBEEECSCCSCEEEEEECSS-
T ss_pred CCceE--eeeeccCcccccccccccccccceeeecCCCCCEEEEEE--cCEEEEEcCCCCceEEccCCCcceEEeeeEc-
Confidence 94432 334443 34479999999 9998877554 7899999998876554322 3 56788999
Q ss_pred CCCEEEEEECCCeEE-EEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEE
Q 044075 645 RLGLLLAAASENVVS-IFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHS 722 (786)
Q Consensus 645 ~g~~Ll~gs~dg~I~-iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~s 722 (786)
+++.|++++.+..|. +||+.+++... +.+|...+.+++|+|||++|++++.+ .|++||+.+++....+..|...+.+
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~ 425 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITD 425 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCC
T ss_pred CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccc
Confidence 999999999888899 99998876554 34788899999999999999999998 9999999999988877788888999
Q ss_pred EEEeCCCCEEEEEECCC----------eEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 723 CIFHPSYPTLMVIGGYQ----------SLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 723 v~fspdg~~L~sgs~dg----------~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
++|+|+|++|++++.++ .|++||+.+++...+..|...+.+++|+|||++|++++.++.+++|+
T Consensus 426 ~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 426 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp EEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred eEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcc
Confidence 99999999998887654 89999999999778888999999999999999999999988877774
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=4.4e-21 Score=229.71 Aligned_cols=269 Identities=8% Similarity=0.064 Sum_probs=204.1
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe--eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceee
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ--TECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQ 588 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~--~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~ 588 (786)
.|.+++|||||++|++++. +.|++||+.++. ....+..|...+.+++|+|||++|++++ ++.|++||+.+++ ...
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~-~~~ 186 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR-QMQ 186 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE-EEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCC-EEE
Confidence 4889999999999999986 999999999873 4556777888999999999999999988 4689999998865 233
Q ss_pred eecCCCCC----------------eEEEEEecCCCeEEEEEcCCC--------------------------------cEE
Q 044075 589 TYTGHNNH----------------VMSLDFHPKKNDLFCSCDGNS--------------------------------EIR 620 (786)
Q Consensus 589 ~~~~h~~~----------------V~sl~~sp~g~~ll~sgs~Dg--------------------------------~I~ 620 (786)
....+... +.+++|+|+++.++++...++ .|+
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 33333332 478999999998875543221 788
Q ss_pred EEeCCC-CeeeEeec-----CCeEEEEEeCCCCEEEEEEC-----CCeEEEEEcCCCcEEEEEecCCC----CEEEEEEc
Q 044075 621 FWNLSQ-YSCARISK-----GGTVQVRFQPRLGLLLAAAS-----ENVVSIFDVETDRLTHSFKGHST----EIHSVCWD 685 (786)
Q Consensus 621 iwDl~~-~~~~~~~~-----~~i~~i~~sp~g~~Ll~gs~-----dg~I~iwD~~t~~~i~~l~~h~~----~I~sv~~s 685 (786)
+||+.+ ++...... ..+..++| |++++|++++. +..|++||+.+++....+..+.. .+.+++|+
T Consensus 267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFL 345 (741)
T ss_dssp EECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEEC
T ss_pred EEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEEC
Confidence 999988 77655432 34678999 99999998765 46799999999987777665443 45689999
Q ss_pred CCCCEEEEEeCC-eEEEEECC-CCeeEEEEccCCCceEEE-EEeCCCCEEEEEECCC---eEEEEECCC-Ce-EEEEccc
Q 044075 686 TNGEYLASVSQD-SVRVWSLA-SGECIHELSSSGNKFHSC-IFHPSYPTLMVIGGYQ---SLELWNMAE-NK-CMTIAAH 757 (786)
Q Consensus 686 pdg~~Lasgs~D-~I~vwDl~-s~~~i~~l~~~~~~I~sv-~fspdg~~L~sgs~dg---~I~IwDl~~-~~-~~~~~~h 757 (786)
|||+++++++.+ .++||.+. .+. +..+..+...+..+ .|+|+++.|++.+.++ .++||++.. +. ...+..
T Consensus 346 pdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~- 423 (741)
T 2ecf_A 346 DDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK- 423 (741)
T ss_dssp TTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-
T ss_pred CCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-
Confidence 999988888877 66777654 344 77787787888887 5999999887666544 789998753 33 333433
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC----CcEEEe
Q 044075 758 DCVISALAQSPVTGMVASASHD----KSVKIW 785 (786)
Q Consensus 758 ~~~V~slafspdg~~LaSgs~D----G~I~IW 785 (786)
...+.+++|+||+++|+....+ ..+.+|
T Consensus 424 ~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~ 455 (741)
T 2ecf_A 424 APGMHSASFARNASVYVDSWSNNSTPPQIELF 455 (741)
T ss_dssp SCSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred CCCceEEEECCCCCEEEEEecCCCCCCeEEEE
Confidence 6778999999999988766443 345554
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=1.3e-20 Score=201.94 Aligned_cols=262 Identities=10% Similarity=0.077 Sum_probs=190.9
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECC-CeEEEEEcC--CCe--eeeecCCCCCCeEEEEEccCCCEEEEEeC-CCcEEEEcC
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHD-KKVVVWNME--NFQ--TECTPDDHNHIITDVRFRPNSTQLATSSF-DKTVRIWDA 580 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~D-g~V~IWdl~--t~~--~~~~l~~h~~~V~sl~fspdg~~Lasgs~-Dg~I~VWdl 580 (786)
.|...+.+++|+|+|++|++++.+ +.|.+|+++ +++ .+..+..+. .+.+++|+|++++|++++. ++.|.+||+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 477789999999999999988876 999999998 444 334454444 7899999999998877765 888999999
Q ss_pred CCCc--ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC-CeeeEee--------cCCeEEEEEeCCCCEE
Q 044075 581 AKPN--FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ-YSCARIS--------KGGTVQVRFQPRLGLL 649 (786)
Q Consensus 581 ~s~~--~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~-~~~~~~~--------~~~i~~i~~sp~g~~L 649 (786)
.++. .....+. ....+.+++|+|+++.+++++..++.|++||+.+ ++..... ...+..++|+|+++++
T Consensus 114 ~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l 192 (343)
T 1ri6_A 114 EDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA 192 (343)
T ss_dssp ETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE
T ss_pred CCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEE
Confidence 5222 1233333 3346899999999998887776899999999987 5443211 1356789999999988
Q ss_pred EEEE-CCCeEEEEEcCC--CcE--EEEEec---C---CCCEEEEEEcCCCCEEEEEe-CC-eEEEEECC--C--CeeEEE
Q 044075 650 LAAA-SENVVSIFDVET--DRL--THSFKG---H---STEIHSVCWDTNGEYLASVS-QD-SVRVWSLA--S--GECIHE 712 (786)
Q Consensus 650 l~gs-~dg~I~iwD~~t--~~~--i~~l~~---h---~~~I~sv~~spdg~~Lasgs-~D-~I~vwDl~--s--~~~i~~ 712 (786)
++++ .++.|.+||+.. ++. ...+.. . ...+.+++|+|++++|+++. .+ .|.+||+. + .+.+..
T Consensus 193 ~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~ 272 (343)
T 1ri6_A 193 YCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGF 272 (343)
T ss_dssp EEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEE
T ss_pred EEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeee
Confidence 7776 689999999954 432 333321 1 23577899999999887555 45 99999998 2 345555
Q ss_pred EccCCCceEEEEEeCCCCEEEEEE-CCCeEEEE--ECCCCeEEEE--cccCCCeEEEEEcCCCC
Q 044075 713 LSSSGNKFHSCIFHPSYPTLMVIG-GYQSLELW--NMAENKCMTI--AAHDCVISALAQSPVTG 771 (786)
Q Consensus 713 l~~~~~~I~sv~fspdg~~L~sgs-~dg~I~Iw--Dl~~~~~~~~--~~h~~~V~slafspdg~ 771 (786)
+..+.. +..++|+|++++|++++ .++.|.+| |..+++...+ ........+++|.++.+
T Consensus 273 ~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 273 QPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEG 335 (343)
T ss_dssp EECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC-
T ss_pred ecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccC
Confidence 555444 88999999999998888 57899999 4456654322 22335577788877544
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.88 E-value=4.8e-21 Score=228.28 Aligned_cols=272 Identities=13% Similarity=0.138 Sum_probs=207.2
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC-----C
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK-----P 583 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s-----~ 583 (786)
...|.+++|||| +.++.+. ++.|++||+.+++.... ..+...+.+++|+|||+.|+++ .|+.|++||+.+ +
T Consensus 81 ~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 81 AFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYL-FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp -CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEE-ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred ccCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEc-cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence 367999999999 6666654 69999999998876544 4566778999999999999985 579999999987 5
Q ss_pred cceeeeecCCCCC--------------eEEEEEecCCCeEEEEEc--------------------------------CCC
Q 044075 584 NFCLQTYTGHNNH--------------VMSLDFHPKKNDLFCSCD--------------------------------GNS 617 (786)
Q Consensus 584 ~~~~~~~~~h~~~--------------V~sl~~sp~g~~ll~sgs--------------------------------~Dg 617 (786)
+. ......+... +.++.|+|+++.+++++. .+.
T Consensus 157 ~~-~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~ 235 (706)
T 2z3z_A 157 RA-IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHV 235 (706)
T ss_dssp CC-EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEE
T ss_pred Cc-EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCee
Confidence 53 3333333232 489999999998875541 346
Q ss_pred cEEEEeCCCCeeeEeec-----CCeEEEEEeCCCCEEEEEECCC-----eEEEEEcCCCcEEEEEe--cCCC---CEEEE
Q 044075 618 EIRFWNLSQYSCARISK-----GGTVQVRFQPRLGLLLAAASEN-----VVSIFDVETDRLTHSFK--GHST---EIHSV 682 (786)
Q Consensus 618 ~I~iwDl~~~~~~~~~~-----~~i~~i~~sp~g~~Ll~gs~dg-----~I~iwD~~t~~~i~~l~--~h~~---~I~sv 682 (786)
.|++||+.+++...... ..+..++|+|+++.|++++.++ .|++||+.+++....+. .+.. .+.++
T Consensus 236 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 236 TVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp EEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCC
T ss_pred EEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCc
Confidence 79999999887655442 3467899999999999988775 89999999984333332 2222 24678
Q ss_pred EEcC--CCCEEEEEeCC-eEEEEECC-CCeeEEEEccCCCceEE-EEEeCCCCEEEEEECCC-----eEEEEECCCCeEE
Q 044075 683 CWDT--NGEYLASVSQD-SVRVWSLA-SGECIHELSSSGNKFHS-CIFHPSYPTLMVIGGYQ-----SLELWNMAENKCM 752 (786)
Q Consensus 683 ~~sp--dg~~Lasgs~D-~I~vwDl~-s~~~i~~l~~~~~~I~s-v~fspdg~~L~sgs~dg-----~I~IwDl~~~~~~ 752 (786)
+|+| +|++|++++.+ .++||++. ++..+..+..+...+.. ++|+|+++.|++++.+. .|+.||+.+++..
T Consensus 316 ~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 395 (706)
T 2z3z_A 316 TFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK 395 (706)
T ss_dssp EECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCE
T ss_pred eeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCce
Confidence 9999 99999988887 78888776 66777788777777876 79999999888777653 6777888877644
Q ss_pred EEcccCCCeEEEEEcCCCCEEEEEeCC----CcEEEeC
Q 044075 753 TIAAHDCVISALAQSPVTGMVASASHD----KSVKIWK 786 (786)
Q Consensus 753 ~~~~h~~~V~slafspdg~~LaSgs~D----G~I~IWd 786 (786)
.+ .|...+.+++|+||+++|+.++.+ +.|.+||
T Consensus 396 ~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 396 DL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp ES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred ec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence 44 477789999999999988776544 4588885
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=3.6e-21 Score=200.65 Aligned_cols=235 Identities=12% Similarity=0.112 Sum_probs=184.7
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC-CeeeeecCCC-CCCeEEEEEccCCCEEEEEe--CCCcEEEE
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN-FQTECTPDDH-NHIITDVRFRPNSTQLATSS--FDKTVRIW 578 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t-~~~~~~l~~h-~~~V~sl~fspdg~~Lasgs--~Dg~I~VW 578 (786)
..+..|...|.+++|+|+|++|++++ ++.|++||+.+ ++.......| ...|.+++|+|++++|++++ .++.+.||
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~ 113 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIY 113 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEE
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEE
Confidence 34556888999999999999999986 88999999999 8877777666 47889999999999999998 34556666
Q ss_pred cCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeC--CCCeeeEe--ecCCeEEEEEeCCCCEEEEEEC
Q 044075 579 DAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNL--SQYSCARI--SKGGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 579 dl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl--~~~~~~~~--~~~~i~~i~~sp~g~~Ll~gs~ 654 (786)
.++........+..+ ..+.+++|+|+++.++++++.++.+++|++ .+...... ....+..++|+|++..|++++.
T Consensus 114 ~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 114 LLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSS 192 (297)
T ss_dssp EEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEEC
T ss_pred EEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEec
Confidence 553222223444433 348999999999998888888999999985 34443333 2356789999999998887774
Q ss_pred -CCeEEEEEcC-CCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC------------eEEEEECCCCee--EEEEccCCC
Q 044075 655 -ENVVSIFDVE-TDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD------------SVRVWSLASGEC--IHELSSSGN 718 (786)
Q Consensus 655 -dg~I~iwD~~-t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D------------~I~vwDl~s~~~--i~~l~~~~~ 718 (786)
++.+.+|++. .+..+..+..|...+.+++|+|++++|++++.+ .|++||+.+++. +..+..+..
T Consensus 193 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 272 (297)
T 2ojh_A 193 RTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQG 272 (297)
T ss_dssp TTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTT
T ss_pred CCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCc
Confidence 8889999886 455667777788889999999999998887652 599999998765 444557778
Q ss_pred ceEEEEEeCCCCEEEEEECCC
Q 044075 719 KFHSCIFHPSYPTLMVIGGYQ 739 (786)
Q Consensus 719 ~I~sv~fspdg~~L~sgs~dg 739 (786)
.+.+++|+|++++|++++.+.
T Consensus 273 ~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 273 TMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TSCSCCBCTTSSEEEEEEECC
T ss_pred ccccceECCCCCEEEEEEecc
Confidence 899999999999999887764
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=1.8e-20 Score=234.09 Aligned_cols=276 Identities=11% Similarity=0.069 Sum_probs=219.6
Q ss_pred eEEeecCCCCe-------EEEEEcCCCCEEEEEECC------CeEEEEEcCCCeeee-----------------------
Q 044075 502 VSSIRKSSSKV-------TCCHFSSDGKLLASAGHD------KKVVVWNMENFQTEC----------------------- 545 (786)
Q Consensus 502 v~~l~~H~~~V-------~~lafSpdg~~Lasgs~D------g~V~IWdl~t~~~~~----------------------- 545 (786)
...+..|...+ .+++|+|||+++++++.+ ..|++|++.+++...
T Consensus 92 ~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~ 171 (1045)
T 1k32_A 92 IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTF 171 (1045)
T ss_dssp EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCS
T ss_pred eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCC
Confidence 56777888888 999999999977777644 358888876554321
Q ss_pred --------------------------ecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEE
Q 044075 546 --------------------------TPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMS 599 (786)
Q Consensus 546 --------------------------~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~s 599 (786)
.+..|...+.++.|+++ .++++++.|+.++||.+.........+..|. .+.+
T Consensus 172 ~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~ 249 (1045)
T 1k32_A 172 ELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYP 249 (1045)
T ss_dssp CCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCE
T ss_pred CccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-Ccce
Confidence 22356777888999887 6677778889999998764332345555555 4677
Q ss_pred EEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC--------------CeEEEEEe-CCCCEEEEEECCCeEEEEEcC
Q 044075 600 LDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKG--------------GTVQVRFQ-PRLGLLLAAASENVVSIFDVE 664 (786)
Q Consensus 600 l~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~--------------~i~~i~~s-p~g~~Ll~gs~dg~I~iwD~~ 664 (786)
++|+|++..++++ .++.|++||+...... .+.. .+..++|+ |++..+++++ ++.|++|++.
T Consensus 250 ~~~SpDG~~la~~--~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~ 325 (1045)
T 1k32_A 250 RHLNTDGRRILFS--KGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVS 325 (1045)
T ss_dssp EEEEESSSCEEEE--ETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTT
T ss_pred eeEcCCCCEEEEE--eCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCC
Confidence 8999999987754 4899999999554443 3332 57889999 9999998887 7899999998
Q ss_pred CCcEEEEEecCCC-CEEEEEEcCCCCEEEEEeCC-eEE-EEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeE
Q 044075 665 TDRLTHSFKGHST-EIHSVCWDTNGEYLASVSQD-SVR-VWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSL 741 (786)
Q Consensus 665 t~~~i~~l~~h~~-~I~sv~~spdg~~Lasgs~D-~I~-vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I 741 (786)
++.... +..|.. .+.+++|+ +|+.|++++.+ .|. +||+..++.. .+..+...+..++|+|++++|++++.++.|
T Consensus 326 ~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v 402 (1045)
T 1k32_A 326 GTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEI 402 (1045)
T ss_dssp SSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEE
T ss_pred CCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeE
Confidence 876544 556777 89999999 99999999988 888 9999887654 444777889999999999999999999999
Q ss_pred EEEECCCCeEEEEc-ccCCCeEEEEEcCCCCEEEEEeCCC----------cEEEeC
Q 044075 742 ELWNMAENKCMTIA-AHDCVISALAQSPVTGMVASASHDK----------SVKIWK 786 (786)
Q Consensus 742 ~IwDl~~~~~~~~~-~h~~~V~slafspdg~~LaSgs~DG----------~I~IWd 786 (786)
++||+.+++...+. .|...|.+++|+|||++|++++.++ .|++||
T Consensus 403 ~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 403 MTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp EEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred EEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence 99999999887665 8899999999999999998887654 899996
No 146
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.86 E-value=2.5e-20 Score=204.51 Aligned_cols=283 Identities=12% Similarity=0.065 Sum_probs=205.2
Q ss_pred eeEEeecCCCCeEE-----EEEcCCCCEEEEEEC-CC--eEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC
Q 044075 501 EVSSIRKSSSKVTC-----CHFSSDGKLLASAGH-DK--KVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFD 572 (786)
Q Consensus 501 ~v~~l~~H~~~V~~-----lafSpdg~~Lasgs~-Dg--~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D 572 (786)
++..+..|...+.. .+|||||++|++++. ++ .|.+||+.+++.......+...+..+.|+||++.|++++.+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 44556666665665 889999999999887 66 48899999998888777777777678999999999999999
Q ss_pred CcEEEEcCCCCcceeeeecCCCCCeEEEE--EecCCCeEEEEE---------------------cCCCcEEEEeCCCCee
Q 044075 573 KTVRIWDAAKPNFCLQTYTGHNNHVMSLD--FHPKKNDLFCSC---------------------DGNSEIRFWNLSQYSC 629 (786)
Q Consensus 573 g~I~VWdl~s~~~~~~~~~~h~~~V~sl~--~sp~g~~ll~sg---------------------s~Dg~I~iwDl~~~~~ 629 (786)
+.|++||+.+++. ...+..+...+.... ++|++..+++.. ..+..|++||+.+++.
T Consensus 102 ~~l~~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (388)
T 3pe7_A 102 RNLMRVDLATLEE-NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES 180 (388)
T ss_dssp TEEEEEETTTCCE-EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE
T ss_pred CeEEEEECCCCcc-eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce
Confidence 9999999998763 444455555554444 478887665321 2347899999998876
Q ss_pred eEeec--CCeEEEEEeC-CCCEEEEEECC------CeEEEEEcCCCcEEEEEecCC--CCEEEEEEcCCCCEEEEEeC--
Q 044075 630 ARISK--GGTVQVRFQP-RLGLLLAAASE------NVVSIFDVETDRLTHSFKGHS--TEIHSVCWDTNGEYLASVSQ-- 696 (786)
Q Consensus 630 ~~~~~--~~i~~i~~sp-~g~~Ll~gs~d------g~I~iwD~~t~~~i~~l~~h~--~~I~sv~~spdg~~Lasgs~-- 696 (786)
..... ..+..+.|+| +++.|+.+..+ ..|.++|...+... .+..+. ..+..++|+|||+.|+..+.
T Consensus 181 ~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (388)
T 3pe7_A 181 TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVPDGSALVYVSYLK 259 (388)
T ss_dssp EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECCCCCEEEEEecCC
Confidence 55443 4578899999 99988887764 37888888766543 333333 35788999999997765443
Q ss_pred C----eEEEEECCCCeeE--EEEccCCCc---eEEEEEeCCCCEEEEE---------ECCCeEEEEECCCCeEEEEcccC
Q 044075 697 D----SVRVWSLASGECI--HELSSSGNK---FHSCIFHPSYPTLMVI---------GGYQSLELWNMAENKCMTIAAHD 758 (786)
Q Consensus 697 D----~I~vwDl~s~~~i--~~l~~~~~~---I~sv~fspdg~~L~sg---------s~dg~I~IwDl~~~~~~~~~~h~ 758 (786)
+ .|++||+.+++.. ..+..+... ...+.|+|+|+.|++. ..+..|++||+.+++...+..|.
T Consensus 260 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 339 (388)
T 3pe7_A 260 GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHD 339 (388)
T ss_dssp TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECC
T ss_pred CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEecccc
Confidence 2 3999999988743 233220000 1113699999988765 34558999999999888777777
Q ss_pred C-----------CeEEEEEcCCCCEEEEEe-CCCcEEEe
Q 044075 759 C-----------VISALAQSPVTGMVASAS-HDKSVKIW 785 (786)
Q Consensus 759 ~-----------~V~slafspdg~~LaSgs-~DG~I~IW 785 (786)
. .+.+++|+|||+.|+.++ .+|...||
T Consensus 340 ~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~ 378 (388)
T 3pe7_A 340 TSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALY 378 (388)
T ss_dssp CCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred CcccccccccccCCCCccCCCCCCEEEEEecCCCceeEE
Confidence 6 688999999999777665 57777777
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=7e-20 Score=196.96 Aligned_cols=267 Identities=8% Similarity=0.053 Sum_probs=192.9
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCC-CCeEEEEEccCCCEEEE-EeCCCcEEEEcCCCCcceeeeec
Q 044075 514 CCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHN-HIITDVRFRPNSTQLAT-SSFDKTVRIWDAAKPNFCLQTYT 591 (786)
Q Consensus 514 ~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~-~~V~sl~fspdg~~Las-gs~Dg~I~VWdl~s~~~~~~~~~ 591 (786)
.+++++++.++++++.++.|++||+.+++.+..+..+. ..+..++|+|+++++++ +..++.|.+||+.+++. ...+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~-~~~~~ 82 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN-TFHAN 82 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE-EEEEE
Confidence 45678889999999999999999999999888776543 25789999999986654 45689999999988763 33333
Q ss_pred -CC-----CCCeEEEEEecCCCeEEEEEcC-----------CCcEEEEeCCCCee---eEee--cCCeEEEEEeCCCCEE
Q 044075 592 -GH-----NNHVMSLDFHPKKNDLFCSCDG-----------NSEIRFWNLSQYSC---ARIS--KGGTVQVRFQPRLGLL 649 (786)
Q Consensus 592 -~h-----~~~V~sl~~sp~g~~ll~sgs~-----------Dg~I~iwDl~~~~~---~~~~--~~~i~~i~~sp~g~~L 649 (786)
.+ ...+.+++|+|+++.++++... ++.|.+||+.+++. +... ...+.+++|+|+++ +
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-L 161 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-E
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-E
Confidence 22 2337889999999988766543 48999999987432 2222 24577888999999 6
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEecCCC------------------------CEEEEEEcCCCCEEEEEeCC--eEEEEE
Q 044075 650 LAAASENVVSIFDVETDRLTHSFKGHST------------------------EIHSVCWDTNGEYLASVSQD--SVRVWS 703 (786)
Q Consensus 650 l~gs~dg~I~iwD~~t~~~i~~l~~h~~------------------------~I~sv~~spdg~~Lasgs~D--~I~vwD 703 (786)
++++ +.|++||+.+++.+..+..+.. ...++++++++......... .+..+|
T Consensus 162 ~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 239 (349)
T 1jmx_B 162 YVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 239 (349)
T ss_dssp EEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred EEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEe
Confidence 6653 4499999999988877764320 34456666654322111111 233366
Q ss_pred CCCCee-EEEEccCCCceEEEEEeC-CCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCc
Q 044075 704 LASGEC-IHELSSSGNKFHSCIFHP-SYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKS 781 (786)
Q Consensus 704 l~s~~~-i~~l~~~~~~I~sv~fsp-dg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~ 781 (786)
..+++. +..+..+...+..++|+| ++++++++ ++.|.+||+.+++.+........+.+++|+|++++|++++.++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 317 (349)
T 1jmx_B 240 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFND 317 (349)
T ss_dssp TTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSE
T ss_pred ccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCe
Confidence 665542 222333566788999999 99998888 88999999999988766555667889999999999988888999
Q ss_pred EEEeC
Q 044075 782 VKIWK 786 (786)
Q Consensus 782 I~IWd 786 (786)
|++||
T Consensus 318 v~v~d 322 (349)
T 1jmx_B 318 LAVFN 322 (349)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99996
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=5.3e-20 Score=219.51 Aligned_cols=273 Identities=9% Similarity=0.081 Sum_probs=195.8
Q ss_pred EEeecCCC---CeEEEEEcCCCCEEEEEECC---------CeEEEEEcCCCeee--eecCCCCCCeEEEEEccCCCEEEE
Q 044075 503 SSIRKSSS---KVTCCHFSSDGKLLASAGHD---------KKVVVWNMENFQTE--CTPDDHNHIITDVRFRPNSTQLAT 568 (786)
Q Consensus 503 ~~l~~H~~---~V~~lafSpdg~~Lasgs~D---------g~V~IWdl~t~~~~--~~l~~h~~~V~sl~fspdg~~Las 568 (786)
..+..|.. .|.+++|||||++|++++.+ +.|++||+.+++.. .....|...|.+++|+|||+.|++
T Consensus 51 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~ 130 (723)
T 1xfd_A 51 VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIF 130 (723)
T ss_dssp EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEE
T ss_pred EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEE
Confidence 34445554 49999999999999999864 78889999988762 223345556899999999999999
Q ss_pred EeCCCcEEEEcCCCCcceeeeecCCCCC------------------eEEEEEecCCCeEEEEEcCC--------------
Q 044075 569 SSFDKTVRIWDAAKPNFCLQTYTGHNNH------------------VMSLDFHPKKNDLFCSCDGN-------------- 616 (786)
Q Consensus 569 gs~Dg~I~VWdl~s~~~~~~~~~~h~~~------------------V~sl~~sp~g~~ll~sgs~D-------------- 616 (786)
++. +.|++||+.+++. ......+... +.+++|+|+++.|+++...+
T Consensus 131 ~~~-~~i~~~~~~~g~~-~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~ 208 (723)
T 1xfd_A 131 IFE-NNIYYCAHVGKQA-IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGS 208 (723)
T ss_dssp EET-TEEEEESSSSSCC-EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSS
T ss_pred EEC-CeEEEEECCCCce-EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCc
Confidence 886 7999999988763 3433333332 37899999999887555322
Q ss_pred -------------------CcEEEEeCCCCeeeEeec---------CCeEEEEEeCCCCEEEEEECC----CeEEEEEcC
Q 044075 617 -------------------SEIRFWNLSQYSCARISK---------GGTVQVRFQPRLGLLLAAASE----NVVSIFDVE 664 (786)
Q Consensus 617 -------------------g~I~iwDl~~~~~~~~~~---------~~i~~i~~sp~g~~Ll~gs~d----g~I~iwD~~ 664 (786)
..|++||+.+++....+. ..+..++|+|+++.+++.... ..|++||+.
T Consensus 209 ~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 288 (723)
T 1xfd_A 209 IYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT 288 (723)
T ss_dssp SSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETT
T ss_pred CCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCC
Confidence 279999998877533332 245779999999988776543 579999999
Q ss_pred CCcEEEEEec-CCCCEE----EEEEcCCCCEEEEE-e-CC-------eEEEEE-CCCCe--eEEEEccCCCceEE-EEEe
Q 044075 665 TDRLTHSFKG-HSTEIH----SVCWDTNGEYLASV-S-QD-------SVRVWS-LASGE--CIHELSSSGNKFHS-CIFH 726 (786)
Q Consensus 665 t~~~i~~l~~-h~~~I~----sv~~spdg~~Lasg-s-~D-------~I~vwD-l~s~~--~i~~l~~~~~~I~s-v~fs 726 (786)
+++....+.. +...+. .++|+|||+.|+.. + .+ .|.+|| ...+. +...+......+.. ++|+
T Consensus 289 ~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~s 368 (723)
T 1xfd_A 289 TGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYD 368 (723)
T ss_dssp TCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEE
T ss_pred CCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEc
Confidence 9987766543 344443 78999999977654 3 22 377788 34444 14455444445554 6899
Q ss_pred CCCCEEEEEECC---CeEEEEECCCC---eEEEEcc---cCCCeEEEEEcCCCCEEEEEe
Q 044075 727 PSYPTLMVIGGY---QSLELWNMAEN---KCMTIAA---HDCVISALAQSPVTGMVASAS 777 (786)
Q Consensus 727 pdg~~L~sgs~d---g~I~IwDl~~~---~~~~~~~---h~~~V~slafspdg~~LaSgs 777 (786)
|+++.|++.+.+ +.++||++... ....+.. |...+..++|+||+++|+...
T Consensus 369 pdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 369 EKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp TTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred CCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 999999887766 68899987642 2223333 677899999999999877654
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=3e-19 Score=193.45 Aligned_cols=262 Identities=8% Similarity=0.123 Sum_probs=183.4
Q ss_pred EEEEEE----CCCeEEEEEcC--CCeeee-ecCCCCCCeEEEEEccCCCEEEEEeC---CCcEEEEcCCCCcc-eeeeec
Q 044075 523 LLASAG----HDKKVVVWNME--NFQTEC-TPDDHNHIITDVRFRPNSTQLATSSF---DKTVRIWDAAKPNF-CLQTYT 591 (786)
Q Consensus 523 ~Lasgs----~Dg~V~IWdl~--t~~~~~-~l~~h~~~V~sl~fspdg~~Lasgs~---Dg~I~VWdl~s~~~-~~~~~~ 591 (786)
.|++|+ .++.|.+|+++ +++... ....+...+..++|+|+++ |++++. ++.|++||+.++.. .+..+.
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~ 82 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV 82 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee
Confidence 355553 34567777665 455433 2334456778899999999 555554 68999999976542 233334
Q ss_pred CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC-C--eeeEeec------------CCeEEEEEeCCCCEEEEEECCC
Q 044075 592 GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ-Y--SCARISK------------GGTVQVRFQPRLGLLLAAASEN 656 (786)
Q Consensus 592 ~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~-~--~~~~~~~------------~~i~~i~~sp~g~~Ll~gs~dg 656 (786)
.+...+..++|+|+++.+++++..++.|.+|++.. + ..+.... ..+..++|+|+++.+++...++
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~ 162 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD 162 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT
T ss_pred cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC
Confidence 56778899999999998887777889999999962 2 2222221 1366799999999444444578
Q ss_pred eEEEEEcC-CCcEE--EEEec-CCCCEEEEEEcCCCCEEEEEeC-C-eEEEEECCC--Cee--EEEEccCC------Cce
Q 044075 657 VVSIFDVE-TDRLT--HSFKG-HSTEIHSVCWDTNGEYLASVSQ-D-SVRVWSLAS--GEC--IHELSSSG------NKF 720 (786)
Q Consensus 657 ~I~iwD~~-t~~~i--~~l~~-h~~~I~sv~~spdg~~Lasgs~-D-~I~vwDl~s--~~~--i~~l~~~~------~~I 720 (786)
.|.+||+. +++.. ..+.. ....+..++|+|+|++|++++. + .|.+|++.. ++. +..+.... ..+
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 242 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGA 242 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEE
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcc
Confidence 99999998 55433 22232 3346888999999997777654 4 899999874 543 33333222 458
Q ss_pred EEEEEeCCCCEEEE-EECCCeEEEEECCCC---eEE-EEcccCCCeEEEEEcCCCCEEEEEeCC-CcEEEe
Q 044075 721 HSCIFHPSYPTLMV-IGGYQSLELWNMAEN---KCM-TIAAHDCVISALAQSPVTGMVASASHD-KSVKIW 785 (786)
Q Consensus 721 ~sv~fspdg~~L~s-gs~dg~I~IwDl~~~---~~~-~~~~h~~~V~slafspdg~~LaSgs~D-G~I~IW 785 (786)
..++|+|++++|++ ...++.|.+|++... +.+ .+..+...+.+++|+||+++|++++.+ +.|.||
T Consensus 243 ~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 243 AAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp EEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred eeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence 88999999998855 456889999999732 222 344556678999999999988888765 899999
No 150
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.85 E-value=4.2e-19 Score=191.42 Aligned_cols=232 Identities=9% Similarity=0.061 Sum_probs=190.1
Q ss_pred CCeEEEEEccCCCEEEEEeC-------CCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeC
Q 044075 552 HIITDVRFRPNSTQLATSSF-------DKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNL 624 (786)
Q Consensus 552 ~~V~sl~fspdg~~Lasgs~-------Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl 624 (786)
..+..++|+|++++|++++. ++.|.+||..+++. ...+.. ...+.+++|+|+++.+++++..++.|.+||+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~-~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEV-TQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCE-EEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeE-EEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 46789999999998888874 56899999998773 444432 3457889999999988888888999999999
Q ss_pred CCCeeeEeecC------------CeEEEEEeCCCCEEEEEE--CCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCE
Q 044075 625 SQYSCARISKG------------GTVQVRFQPRLGLLLAAA--SENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEY 690 (786)
Q Consensus 625 ~~~~~~~~~~~------------~i~~i~~sp~g~~Ll~gs--~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~ 690 (786)
.+++.+..+.. .+..++|+|+++++++++ .++.|.+||..+++.+..+..+...+.+++|+|++++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 99887665542 157799999999888887 3788999999999998888766677889999999999
Q ss_pred EEEEeCC-eEEEEECCCCeeEEEEcc----CCCceEEEEEeCCCCEEEEEECC-CeEEEEECCCCeEEEEcccCCCeEEE
Q 044075 691 LASVSQD-SVRVWSLASGECIHELSS----SGNKFHSCIFHPSYPTLMVIGGY-QSLELWNMAENKCMTIAAHDCVISAL 764 (786)
Q Consensus 691 Lasgs~D-~I~vwDl~s~~~i~~l~~----~~~~I~sv~fspdg~~L~sgs~d-g~I~IwDl~~~~~~~~~~h~~~V~sl 764 (786)
|++++.+ .|.+||+.+++.+..+.. +...+..++|+|+++++++++.+ +.|.+||+.+++.+........ .++
T Consensus 199 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~ 277 (353)
T 3vgz_A 199 LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAV 277 (353)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCE
T ss_pred EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceE
Confidence 9999888 999999999998887765 44567889999999988888765 8999999999887644433332 579
Q ss_pred EEcCCCCEEEEEe-CCCcEEEeC
Q 044075 765 AQSPVTGMVASAS-HDKSVKIWK 786 (786)
Q Consensus 765 afspdg~~LaSgs-~DG~I~IWd 786 (786)
+|+|++++++.++ .++.|.+||
T Consensus 278 ~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 278 LFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEECCCCeEEEEE
Confidence 9999999665555 689999996
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.85 E-value=1.2e-19 Score=193.92 Aligned_cols=235 Identities=10% Similarity=0.107 Sum_probs=185.3
Q ss_pred CeEEEEEcCCCCEEE-EEECCCeEEEEEcCCCeeeeecCCC-----CCCeEEEEEccCCCEEEEEe------------CC
Q 044075 511 KVTCCHFSSDGKLLA-SAGHDKKVVVWNMENFQTECTPDDH-----NHIITDVRFRPNSTQLATSS------------FD 572 (786)
Q Consensus 511 ~V~~lafSpdg~~La-sgs~Dg~V~IWdl~t~~~~~~l~~h-----~~~V~sl~fspdg~~Lasgs------------~D 572 (786)
.+.+++|+|+|++++ ++..++.|.+||+.+++.+..+... ...+.+++|+|++++|++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 488999999998765 4556789999999998887766432 22577899999999998886 57
Q ss_pred CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCe--EEEEEeCCCCEEE
Q 044075 573 KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGT--VQVRFQPRLGLLL 650 (786)
Q Consensus 573 g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i--~~i~~sp~g~~Ll 650 (786)
+.|.+||+.+++ ....+.. ...+.+++|+|+++.++++ ++.|++||+.+++......... ..+.|+|++..++
T Consensus 115 ~~i~v~d~~~~~-~~~~~~~-~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 189 (337)
T 1pby_B 115 TRVALYDAETLS-RRKAFEA-PRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVW 189 (337)
T ss_dssp CEEEEEETTTTE-EEEEEEC-CSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCC
T ss_pred ceEEEEECCCCc-EEEEEeC-CCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEe
Confidence 999999998766 3444433 4567889999999988755 6889999999988776554221 3447888888766
Q ss_pred EEECCC------------------------eEEEEEcCCCcEE-EEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECC
Q 044075 651 AAASEN------------------------VVSIFDVETDRLT-HSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLA 705 (786)
Q Consensus 651 ~gs~dg------------------------~I~iwD~~t~~~i-~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~ 705 (786)
+.+..+ .|.+||+.+++.. ..+..+...+.+++|+|++++++++ .+.|.+||+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~ 268 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLE 268 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETT
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECC
Confidence 554332 4789999998764 2344567788999999999999888 3599999999
Q ss_pred CCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 706 SGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 706 s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
+++.+..+... ..+.+++|+|++++|++++.++.|.+||+.+++.+
T Consensus 269 ~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 269 KNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp TTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred CCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEE
Confidence 99988777643 56789999999999999988999999999998766
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=2.1e-18 Score=187.99 Aligned_cols=257 Identities=13% Similarity=0.139 Sum_probs=188.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEECC----CeEEEEEcCC--Ce--eeeecCCCCCCeEEEEEccCCCEEEEEe-CCCcEEEE
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHD----KKVVVWNMEN--FQ--TECTPDDHNHIITDVRFRPNSTQLATSS-FDKTVRIW 578 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~D----g~V~IWdl~t--~~--~~~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~I~VW 578 (786)
|...+..++|+|||++|++++.+ +.|.+|+++. ++ .+.....+......+++ ++++|++++ .++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 66778899999999999999876 7999999875 43 33344445567778888 788777776 57899999
Q ss_pred cCCCCcceeee-----ec--------CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee------e--------E
Q 044075 579 DAAKPNFCLQT-----YT--------GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC------A--------R 631 (786)
Q Consensus 579 dl~s~~~~~~~-----~~--------~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~------~--------~ 631 (786)
++......... .. .+...+.+++|+|+++.+++++..++.|.+|++..... + .
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99754422111 11 11234688999999998988888899999998875331 1 1
Q ss_pred ee--cCCeEEEEEeCCCCEEEEEE-CCCeEEEEEcCCCcE--EEEEe---cCCCCEEEEEEcCCCCEEEEEe-C-C-eEE
Q 044075 632 IS--KGGTVQVRFQPRLGLLLAAA-SENVVSIFDVETDRL--THSFK---GHSTEIHSVCWDTNGEYLASVS-Q-D-SVR 700 (786)
Q Consensus 632 ~~--~~~i~~i~~sp~g~~Ll~gs-~dg~I~iwD~~t~~~--i~~l~---~h~~~I~sv~~spdg~~Lasgs-~-D-~I~ 700 (786)
.. ......++|+|+++++++++ .++.|.+||+.+++. +..+. .+...+.+++|+|||++|+++. . + .|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 11 24567899999999988888 589999999987754 33332 2345578999999999886654 4 4 899
Q ss_pred EEECC--CCe--eEEEEccCCCceEEEEEeCCCCEEEEEE-CCCeEEEE--ECCCCeEEEEc--ccCCCeEEEEEc
Q 044075 701 VWSLA--SGE--CIHELSSSGNKFHSCIFHPSYPTLMVIG-GYQSLELW--NMAENKCMTIA--AHDCVISALAQS 767 (786)
Q Consensus 701 vwDl~--s~~--~i~~l~~~~~~I~sv~fspdg~~L~sgs-~dg~I~Iw--Dl~~~~~~~~~--~h~~~V~slafs 767 (786)
+|++. +++ .+..+.. ...+..++|+|++++|++++ .++.|.+| |..+++...+. .+...+.||.|.
T Consensus 286 v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 99996 444 4455544 56788999999999999988 56789996 55577766543 345678999886
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=8.1e-19 Score=190.03 Aligned_cols=245 Identities=14% Similarity=0.174 Sum_probs=179.8
Q ss_pred cCCCCeEEEEEcCCCCEEEEEEC---CCeEEEEEcCCCe--eeeecCCCCCCeEEEEEccCCCEEEEEe-CCCcEEEEcC
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGH---DKKVVVWNMENFQ--TECTPDDHNHIITDVRFRPNSTQLATSS-FDKTVRIWDA 580 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~---Dg~V~IWdl~t~~--~~~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~I~VWdl 580 (786)
.+...+..++|+|||+ |++++. ++.|++|++.+++ .+..+..+...+..++|+|++++|++++ .++.|.+|++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 3456788899999999 555544 6899999997765 3444455677889999999999998888 6799999999
Q ss_pred CCCcce--eeeecC---------CCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC-CCeeeEee-----c-CCeEEEEE
Q 044075 581 AKPNFC--LQTYTG---------HNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS-QYSCARIS-----K-GGTVQVRF 642 (786)
Q Consensus 581 ~s~~~~--~~~~~~---------h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~-~~~~~~~~-----~-~~i~~i~~ 642 (786)
...... +..+.. +...+.+++|+|+++ ++++...++.|.+|++. .++..... . .....++|
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 643211 222211 123488999999999 88788888999999998 44433211 1 25678999
Q ss_pred eCCCCEEEEEE-CCCeEEEEEcCC--CcE--EEEEecCC------CCEEEEEEcCCCCEEEE-EeCC-eEEEEECCC---
Q 044075 643 QPRLGLLLAAA-SENVVSIFDVET--DRL--THSFKGHS------TEIHSVCWDTNGEYLAS-VSQD-SVRVWSLAS--- 706 (786)
Q Consensus 643 sp~g~~Ll~gs-~dg~I~iwD~~t--~~~--i~~l~~h~------~~I~sv~~spdg~~Las-gs~D-~I~vwDl~s--- 706 (786)
+|+++++++++ .++.|.+|++.. ++. +..+.... ..+..++|+|+|++|++ +..+ .|.+||+..
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~ 274 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH 274 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc
Confidence 99999777765 478999999874 443 33333322 45889999999998754 4445 999999973
Q ss_pred CeeEEEEccCCCceEEEEEeCCCCEEEEEECC-CeEEEE--ECCCCeEEE
Q 044075 707 GECIHELSSSGNKFHSCIFHPSYPTLMVIGGY-QSLELW--NMAENKCMT 753 (786)
Q Consensus 707 ~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d-g~I~Iw--Dl~~~~~~~ 753 (786)
.+.+..+..+...+..++|+|++++|++++.+ +.|.+| |..+++...
T Consensus 275 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 275 LTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp EEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 35566666666678899999999999998875 799999 555666653
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=1.3e-18 Score=189.57 Aligned_cols=263 Identities=10% Similarity=0.098 Sum_probs=187.0
Q ss_pred CCEEEEEE----CCCeEEEEEcC--CCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC----CcEEEEcCCCC--cc-ee
Q 044075 521 GKLLASAG----HDKKVVVWNME--NFQTECTPDDHNHIITDVRFRPNSTQLATSSFD----KTVRIWDAAKP--NF-CL 587 (786)
Q Consensus 521 g~~Lasgs----~Dg~V~IWdl~--t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D----g~I~VWdl~s~--~~-~~ 587 (786)
..++++|+ .++.|.+|+++ +++.......+...+..++|+|++++|++++.+ +.|.+|++... .. .+
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence 34556664 35689999764 454332222267778889999999999999886 79999998763 21 12
Q ss_pred eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe------e-----------cCCeEEEEEeCCCCEEE
Q 044075 588 QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI------S-----------KGGTVQVRFQPRLGLLL 650 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~------~-----------~~~i~~i~~sp~g~~Ll 650 (786)
.....+......+++ +++.++++...++.|.+|++.....+.. . ...+.+++|+|++++++
T Consensus 93 ~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 93 NTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp EEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred eEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 233345566777887 7888887777899999999975332211 1 12346799999999887
Q ss_pred EEEC-CCeEEEEEcCCCc-------E------EEEEecCCCCEEEEEEcCCCCEEEEEeC-C-eEEEEECCCCee--EEE
Q 044075 651 AAAS-ENVVSIFDVETDR-------L------THSFKGHSTEIHSVCWDTNGEYLASVSQ-D-SVRVWSLASGEC--IHE 712 (786)
Q Consensus 651 ~gs~-dg~I~iwD~~t~~-------~------i~~l~~h~~~I~sv~~spdg~~Lasgs~-D-~I~vwDl~s~~~--i~~ 712 (786)
+++. ++.|.+|++.... + ......+...+.+++|+|+|+++++++. + .|.+||+.+++. +..
T Consensus 171 ~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 171 ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE
T ss_pred EEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE
Confidence 7765 7899999987543 2 1112235567889999999998888774 4 999999987754 333
Q ss_pred Ecc---CCCceEEEEEeCCCCEEEEEECC--CeEEEEECC--CCeEE--EEcccCCCeEEEEEcCCCCEEEEEe-CCCcE
Q 044075 713 LSS---SGNKFHSCIFHPSYPTLMVIGGY--QSLELWNMA--ENKCM--TIAAHDCVISALAQSPVTGMVASAS-HDKSV 782 (786)
Q Consensus 713 l~~---~~~~I~sv~fspdg~~L~sgs~d--g~I~IwDl~--~~~~~--~~~~h~~~V~slafspdg~~LaSgs-~DG~I 782 (786)
+.. +......++|+|++++|+++..+ +.|.+|++. +++.. ........+.+++|+||+++|++++ .++.|
T Consensus 251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v 330 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVI 330 (361)
T ss_dssp EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEE
T ss_pred EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCE
Confidence 322 23456899999999999887765 799999986 44432 2222256788999999999888887 67899
Q ss_pred EEe
Q 044075 783 KIW 785 (786)
Q Consensus 783 ~IW 785 (786)
.||
T Consensus 331 ~v~ 333 (361)
T 3scy_A 331 QIF 333 (361)
T ss_dssp EEE
T ss_pred EEE
Confidence 996
No 155
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=3.7e-19 Score=200.74 Aligned_cols=237 Identities=9% Similarity=0.128 Sum_probs=173.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe----------eeee-----cCCCCCCeEEEEEccCCCEEE----E
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ----------TECT-----PDDHNHIITDVRFRPNSTQLA----T 568 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~----------~~~~-----l~~h~~~V~sl~fspdg~~La----s 568 (786)
+...+.++++++++.+|++++.|+ |+||+..... .+.. ...|...|++++|+|++++|+ +
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 344689999999999999999888 8998754210 1110 123566799999999999999 7
Q ss_pred EeCCCcEEEEcCCCC-----cc-----eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee---cC
Q 044075 569 SSFDKTVRIWDAAKP-----NF-----CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS---KG 635 (786)
Q Consensus 569 gs~Dg~I~VWdl~s~-----~~-----~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~---~~ 635 (786)
++.|+.|+|||+.+. .. ....+.+|...|.+++|+|+...++++++.||+|++||+++....... ..
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~ 193 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV 193 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence 888999999998654 11 145567799999999999997778889999999999999988655433 45
Q ss_pred CeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecC-------CCCEEEEEEcCCCCEEEEEe-CC-------eEE
Q 044075 636 GTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGH-------STEIHSVCWDTNGEYLASVS-QD-------SVR 700 (786)
Q Consensus 636 ~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h-------~~~I~sv~~spdg~~Lasgs-~D-------~I~ 700 (786)
.+.+++|+|++.+|++++.|+.|++||++ ++....+..| ...|.+++|++++.++++.+ .+ .++
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~ 272 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVV 272 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceE
Confidence 78999999999999999999999999998 5556655443 23799999999988876543 21 399
Q ss_pred EEECCCCe-----eEEEEc-------cCCCceEEEEEeCCCCEEEEEECC-CeEEEEEC
Q 044075 701 VWSLASGE-----CIHELS-------SSGNKFHSCIFHPSYPTLMVIGGY-QSLELWNM 746 (786)
Q Consensus 701 vwDl~s~~-----~i~~l~-------~~~~~I~sv~fspdg~~L~sgs~d-g~I~IwDl 746 (786)
+|+++..+ ....+. ....+...+.+.++.+++++++.. ..|.|+..
T Consensus 273 i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~ 331 (434)
T 2oit_A 273 MALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILAR 331 (434)
T ss_dssp EEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEE
T ss_pred EEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEe
Confidence 99998642 112221 112233344455777777777654 34555543
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=9.9e-21 Score=226.17 Aligned_cols=266 Identities=12% Similarity=0.115 Sum_probs=200.8
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCC---CeEEEEEccCCCEEEEEeC---------CCcEEEEcCC
Q 044075 514 CCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNH---IITDVRFRPNSTQLATSSF---------DKTVRIWDAA 581 (786)
Q Consensus 514 ~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~---~V~sl~fspdg~~Lasgs~---------Dg~I~VWdl~ 581 (786)
+++|+|||+++++ +.|+.|++||+.+++....+..|.. .|.+++|+|||++|++++. |+.|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 7899999966555 4699999999999988777765543 4899999999999998876 7899999998
Q ss_pred CCccee-eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC----e-----------------EE
Q 044075 582 KPNFCL-QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG----T-----------------VQ 639 (786)
Q Consensus 582 s~~~~~-~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~----i-----------------~~ 639 (786)
+++... ..+ ...+.+++|+|+|+.++++ . ++.|++||+.+++........ + ..
T Consensus 99 ~g~~~~~~~l---~~~~~~~~~SPDG~~la~~-~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 99 NGEFVRGNEL---PRPIQYLCWSPVGSKLAYV-Y-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TTEECCSSCC---CSSBCCEEECSSTTCEEEE-E-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred CCccccceec---CcccccceECCCCCEEEEE-E-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 876210 222 2568899999999988754 3 789999999887765543211 1 47
Q ss_pred EEEeCCCCEEEEEECCC----------------------------------eEEEEEcCCCcEE---E-----EEecCCC
Q 044075 640 VRFQPRLGLLLAAASEN----------------------------------VVSIFDVETDRLT---H-----SFKGHST 677 (786)
Q Consensus 640 i~~sp~g~~Ll~gs~dg----------------------------------~I~iwD~~t~~~i---~-----~l~~h~~ 677 (786)
++|+|||++|++++.|. .|++||+.+++.+ . .+.+|..
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 253 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY 253 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc
Confidence 99999999999988652 7889999987642 1 1235788
Q ss_pred CEEEEEEcCCCCEEEEEeCC-----eEEEEE----CCCCeeEEEE----ccCCCceE-----EEEEeCCCCEEEE--EEC
Q 044075 678 EIHSVCWDTNGEYLASVSQD-----SVRVWS----LASGECIHEL----SSSGNKFH-----SCIFHPSYPTLMV--IGG 737 (786)
Q Consensus 678 ~I~sv~~spdg~~Lasgs~D-----~I~vwD----l~s~~~i~~l----~~~~~~I~-----sv~fspdg~~L~s--gs~ 737 (786)
.+.+++|+||++++++.... .|.+|| +.++++...+ ..+...+. .+.|+|+|+.|+. ...
T Consensus 254 ~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 333 (719)
T 1z68_A 254 YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK 333 (719)
T ss_dssp EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence 89999999998877764422 488999 8777655444 35555565 7899999996655 334
Q ss_pred CC--eEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEeC
Q 044075 738 YQ--SLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHD-----KSVKIWK 786 (786)
Q Consensus 738 dg--~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~D-----G~I~IWd 786 (786)
++ .|++||+.+++...+..+...|..+.++ +++.|+..+.+ +.++||+
T Consensus 334 ~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~ 388 (719)
T 1z68_A 334 DGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYR 388 (719)
T ss_dssp TSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEE
T ss_pred CCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEE
Confidence 44 6888898888777777777778888888 88877766654 7888884
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.83 E-value=3.3e-19 Score=212.42 Aligned_cols=255 Identities=13% Similarity=0.170 Sum_probs=189.4
Q ss_pred eEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCC-----CeeeeecCCCCCC--------------eEEEEEccC
Q 044075 502 VSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMEN-----FQTECTPDDHNHI--------------ITDVRFRPN 562 (786)
Q Consensus 502 v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t-----~~~~~~l~~h~~~--------------V~sl~fspd 562 (786)
...+..|...+.+++|||||++||++ .|+.|++||+.+ ++.......+... +.+++|+||
T Consensus 113 ~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpD 191 (706)
T 2z3z_A 113 VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPK 191 (706)
T ss_dssp EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTT
T ss_pred eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCC
Confidence 34455677889999999999999995 689999999998 7776655544443 489999999
Q ss_pred CCEEEEEe---------------------------------CCCcEEEEcCCCCcceeeee--cCCCCCeEEEEEecCCC
Q 044075 563 STQLATSS---------------------------------FDKTVRIWDAAKPNFCLQTY--TGHNNHVMSLDFHPKKN 607 (786)
Q Consensus 563 g~~Lasgs---------------------------------~Dg~I~VWdl~s~~~~~~~~--~~h~~~V~sl~~sp~g~ 607 (786)
|++|++++ .+..|++||+.+++. .... ..|...+.+++|+|+++
T Consensus 192 g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg~ 270 (706)
T 2z3z_A 192 GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT-VYLQTGEPKEKFLTNLSWSPDEN 270 (706)
T ss_dssp SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE-EECCCCSCTTCEEEEEEECTTSS
T ss_pred CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce-EeeccCCCCceeEeeEEEECCCC
Confidence 99999987 446799999988763 2222 25667899999999999
Q ss_pred eEEEEEcCC----CcEEEEeCCCC-eeeEeec--C-----CeEEEEEeC--CCCEEEEEECCCeEEEEEcC-CCcEEEEE
Q 044075 608 DLFCSCDGN----SEIRFWNLSQY-SCARISK--G-----GTVQVRFQP--RLGLLLAAASENVVSIFDVE-TDRLTHSF 672 (786)
Q Consensus 608 ~ll~sgs~D----g~I~iwDl~~~-~~~~~~~--~-----~i~~i~~sp--~g~~Ll~gs~dg~I~iwD~~-t~~~i~~l 672 (786)
.+++++... ..|++||+.++ ....... . .+..++|+| ++++++++..++.+.||++. ++..+..+
T Consensus 271 ~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l 350 (706)
T 2z3z_A 271 ILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQV 350 (706)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEEC
T ss_pred EEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEec
Confidence 777544322 38999999988 4333321 1 135679999 99988888889988888876 56777778
Q ss_pred ecCCCCEEE-EEEcCCCCEEEEEeCC------eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECC----CeE
Q 044075 673 KGHSTEIHS-VCWDTNGEYLASVSQD------SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY----QSL 741 (786)
Q Consensus 673 ~~h~~~I~s-v~~spdg~~Lasgs~D------~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d----g~I 741 (786)
..|...+.+ ++|+|+++.|+.++.+ .|..||+.+++ +..+. +...+.+++|+|++++|++...+ +.|
T Consensus 351 ~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i 428 (706)
T 2z3z_A 351 TKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKV 428 (706)
T ss_dssp CCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEE
T ss_pred CCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEE
Confidence 778778877 7999999988766543 46667777765 33443 56778999999999988877554 469
Q ss_pred EEEECCCCeEEEEcccCCCe
Q 044075 742 ELWNMAENKCMTIAAHDCVI 761 (786)
Q Consensus 742 ~IwDl~~~~~~~~~~h~~~V 761 (786)
++||+.+++ .....+...+
T Consensus 429 ~l~d~~~~~-~~~~~~~~~~ 447 (706)
T 2z3z_A 429 TVTNIGKGS-HTLLEAKNPD 447 (706)
T ss_dssp EEEESSSCE-EEEEECC---
T ss_pred EEEECCCCe-Eeeccccchh
Confidence 999999887 4333333333
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.81 E-value=9.5e-18 Score=183.98 Aligned_cols=262 Identities=10% Similarity=0.070 Sum_probs=183.9
Q ss_pred EEEEEECC--CeEEEEEc--CCCeeeee--c-CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC-CCcceeeeecC-C
Q 044075 523 LLASAGHD--KKVVVWNM--ENFQTECT--P-DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA-KPNFCLQTYTG-H 593 (786)
Q Consensus 523 ~Lasgs~D--g~V~IWdl--~t~~~~~~--l-~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~-s~~~~~~~~~~-h 593 (786)
+|++|+.. +.|.+|++ .+++.... . ......+..++|+|++++|++++.+ .|.+|++. +++ ....... .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~-~~~~~~~~~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTE-IVHEASHPI 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTE-EEEEEEEEC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCC-EEEeeEeec
Confidence 45666653 46887765 45544322 1 1234468899999999999999888 99999997 554 2222211 1
Q ss_pred CCCeEEEEEecCCCeE-EEEEc-------------CCCcEEEEeCCC-CeeeEee-------cCCeEEEEEeCCCCEEEE
Q 044075 594 NNHVMSLDFHPKKNDL-FCSCD-------------GNSEIRFWNLSQ-YSCARIS-------KGGTVQVRFQPRLGLLLA 651 (786)
Q Consensus 594 ~~~V~sl~~sp~g~~l-l~sgs-------------~Dg~I~iwDl~~-~~~~~~~-------~~~i~~i~~sp~g~~Ll~ 651 (786)
.+.+.+++|+|+++.+ +++++ .++.+.+|++.. ++..... ...+..++|+|+++++++
T Consensus 82 ~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 1235678999999863 44553 689999999973 4433221 246788999999999888
Q ss_pred EEC-CCeEEEEEcC-CCcEE--EEEe--cCCCCEEEEEEcCCCCEEEEEeC-C-eEEEEECC--CCeeE---EEEccC--
Q 044075 652 AAS-ENVVSIFDVE-TDRLT--HSFK--GHSTEIHSVCWDTNGEYLASVSQ-D-SVRVWSLA--SGECI---HELSSS-- 716 (786)
Q Consensus 652 gs~-dg~I~iwD~~-t~~~i--~~l~--~h~~~I~sv~~spdg~~Lasgs~-D-~I~vwDl~--s~~~i---~~l~~~-- 716 (786)
+.. ++.|++||+. +++.. ..+. .|...+..++|+|+|++|++++. + .|.+|++. +++.. ..+...
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 775 5899999998 67543 3343 24667999999999999988875 3 89998765 56542 222211
Q ss_pred -----CC------ceEEEE-EeCCCCEEEEEECC-C-----eEEEEECC-CCeEEE----EcccCCCeEEEEEcC---CC
Q 044075 717 -----GN------KFHSCI-FHPSYPTLMVIGGY-Q-----SLELWNMA-ENKCMT----IAAHDCVISALAQSP---VT 770 (786)
Q Consensus 717 -----~~------~I~sv~-fspdg~~L~sgs~d-g-----~I~IwDl~-~~~~~~----~~~h~~~V~slafsp---dg 770 (786)
.. .+..++ |+|++++|+++..+ + .|.+|++. +++... ...+...+..++|+| |+
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg 321 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD 321 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCC
Confidence 11 478999 99999998877643 2 89999996 566543 223556678899999 89
Q ss_pred CEEEEEeCC-CcEEEeC
Q 044075 771 GMVASASHD-KSVKIWK 786 (786)
Q Consensus 771 ~~LaSgs~D-G~I~IWd 786 (786)
++|++++.+ +.|+||+
T Consensus 322 ~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 322 EWMAITDDQEGWLEIYR 338 (365)
T ss_dssp TEEEEECSSSCEEEEEE
T ss_pred CEEEEEEcCCCeEEEEE
Confidence 999999865 8999995
No 159
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.80 E-value=1.1e-18 Score=191.34 Aligned_cols=271 Identities=11% Similarity=0.021 Sum_probs=189.9
Q ss_pred CeEEEEEcCCCCEEEEEECC---CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 511 KVTCCHFSSDGKLLASAGHD---KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~D---g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
.+.+++|+|||++|+..... ..|.+||+.+++.......+...+..+.|+||++.|+.++.++.|++||+.+++ ..
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~-~~ 115 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE-EQ 115 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC-EE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC-cE
Confidence 37788999999998877543 478999999887655544443334448899999999999999999999998766 23
Q ss_pred eeecCCCCCeEE-------------------EEEecCCCeEEEEE----cCCCcEEEEeCCCCeeeEee--cCCeEEEEE
Q 044075 588 QTYTGHNNHVMS-------------------LDFHPKKNDLFCSC----DGNSEIRFWNLSQYSCARIS--KGGTVQVRF 642 (786)
Q Consensus 588 ~~~~~h~~~V~s-------------------l~~sp~g~~ll~sg----s~Dg~I~iwDl~~~~~~~~~--~~~i~~i~~ 642 (786)
.....+...... +.|+|+++.+++.. ..+..|++||+.+++..... ...+..+.|
T Consensus 116 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~ 195 (396)
T 3c5m_A 116 VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIY 195 (396)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEE
T ss_pred EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceE
Confidence 333333332222 34566666554332 45678999999887765443 355778899
Q ss_pred eC-CCCEEEEEECC------CeEEEEEcCCCcEEEEEecC-CCCEEEEEEcCCCCEEEEEeCC----e--EEEEECCCCe
Q 044075 643 QP-RLGLLLAAASE------NVVSIFDVETDRLTHSFKGH-STEIHSVCWDTNGEYLASVSQD----S--VRVWSLASGE 708 (786)
Q Consensus 643 sp-~g~~Ll~gs~d------g~I~iwD~~t~~~i~~l~~h-~~~I~sv~~spdg~~Lasgs~D----~--I~vwDl~s~~ 708 (786)
+| ++..|+.++.+ ..|.+||+..++........ ...+..++|+|+|++|+.++.+ . |++||+.+++
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE 275 (396)
T ss_dssp ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC
T ss_pred CCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCC
Confidence 99 78877776653 36899998766543322211 2357889999999977666421 4 9999999886
Q ss_pred eEEEEccCCCceEEEEEeC-CCCEEEEEE----------------CCCeEEEEECCCCeEEEEcccCC-----------C
Q 044075 709 CIHELSSSGNKFHSCIFHP-SYPTLMVIG----------------GYQSLELWNMAENKCMTIAAHDC-----------V 760 (786)
Q Consensus 709 ~i~~l~~~~~~I~sv~fsp-dg~~L~sgs----------------~dg~I~IwDl~~~~~~~~~~h~~-----------~ 760 (786)
........ . .. +.|+| +++++++++ .+..|++||+.+++...+..+.. .
T Consensus 276 ~~~l~~~~-~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~ 352 (396)
T 3c5m_A 276 NEEVMVMP-P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQIT 352 (396)
T ss_dssp EEEEEECC-S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTT
T ss_pred eEEeeeCC-C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCC
Confidence 54332222 2 33 88999 999888765 24689999999887666666654 2
Q ss_pred eEEEEEcCCCCEEEEEeC-CCcEEEe
Q 044075 761 ISALAQSPVTGMVASASH-DKSVKIW 785 (786)
Q Consensus 761 V~slafspdg~~LaSgs~-DG~I~IW 785 (786)
+.+++|+|||+.|+.++. ++...||
T Consensus 353 ~~~~~~s~dg~~l~~~s~~~~~~~l~ 378 (396)
T 3c5m_A 353 HPHPSFTPNDDGVLFTSDFEGVPAIY 378 (396)
T ss_dssp CCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred CCCceEccCCCeEEEEecCCCCceEE
Confidence 677899999998877664 5666666
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=3.4e-18 Score=204.16 Aligned_cols=272 Identities=10% Similarity=0.051 Sum_probs=191.3
Q ss_pred CeEEEEEcCCCCEEEEEEC---------CCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 511 KVTCCHFSSDGKLLASAGH---------DKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~---------Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
.|.+++|||||++|++++. ++.|++||+.+++.+... .....+.+++|+|||+.|+++. |+.|++||+.
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~-~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~ 138 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN-ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRP 138 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS-CCCSSBCCEEECSSTTCEEEEE-TTEEEEESST
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccce-ecCcccccceECCCCCEEEEEE-CCeEEEEeCC
Confidence 4899999999999999876 789999999998773111 1125689999999999999886 7899999998
Q ss_pred CCcceeeeecCCCCCe-----------------EEEEEecCCCeEEEEEcCCC---------------------------
Q 044075 582 KPNFCLQTYTGHNNHV-----------------MSLDFHPKKNDLFCSCDGNS--------------------------- 617 (786)
Q Consensus 582 s~~~~~~~~~~h~~~V-----------------~sl~~sp~g~~ll~sgs~Dg--------------------------- 617 (786)
+++.......++...| .+++|+|+|+.|+++...++
T Consensus 139 ~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g 218 (719)
T 1z68_A 139 GDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAG 218 (719)
T ss_dssp TSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTT
T ss_pred CCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCC
Confidence 8764222223333322 48999999998875553321
Q ss_pred ------cEEEEeCCCCeee---Ee--------ecCCeEEEEEeCCCCEEEEEECC----CeEEEEE----cCCCcEEEEE
Q 044075 618 ------EIRFWNLSQYSCA---RI--------SKGGTVQVRFQPRLGLLLAAASE----NVVSIFD----VETDRLTHSF 672 (786)
Q Consensus 618 ------~I~iwDl~~~~~~---~~--------~~~~i~~i~~sp~g~~Ll~gs~d----g~I~iwD----~~t~~~i~~l 672 (786)
.|++||+.+++.. .. ....+..++|+|++..+++.... ..|.+|| +.+++....+
T Consensus 219 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~ 298 (719)
T 1z68_A 219 AKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQ 298 (719)
T ss_dssp SCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGG
T ss_pred CCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEE
Confidence 7889999987642 21 12346789999997665554432 2488999 7777655444
Q ss_pred ----ecCCCCEE-----EEEEcCCCCEEEE--EeCC---eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECC
Q 044075 673 ----KGHSTEIH-----SVCWDTNGEYLAS--VSQD---SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGY 738 (786)
Q Consensus 673 ----~~h~~~I~-----sv~~spdg~~Las--gs~D---~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~d 738 (786)
..|...+. .+.|+|||+.|+. ...+ .|.+||+.+++ ...+..+...+..+.++ +++.|+..+.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~ 376 (719)
T 1z68_A 299 EHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNE 376 (719)
T ss_dssp EEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESC
T ss_pred ecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEec
Confidence 35676676 8899999996554 3233 68889988776 44565566668888877 88888888776
Q ss_pred -----CeEEEEECCC--C--eEEEEc----ccCCCeEEEEEcCCCCEEEE-EeCC--CcEEEeC
Q 044075 739 -----QSLELWNMAE--N--KCMTIA----AHDCVISALAQSPVTGMVAS-ASHD--KSVKIWK 786 (786)
Q Consensus 739 -----g~I~IwDl~~--~--~~~~~~----~h~~~V~slafspdg~~LaS-gs~D--G~I~IWd 786 (786)
+.+++|.+.. + +...+. +|...+..+.|+|++++|+. ++.+ ..+.+||
T Consensus 377 ~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d 440 (719)
T 1z68_A 377 FEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHD 440 (719)
T ss_dssp GGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEEC
T ss_pred CCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEE
Confidence 6788887653 4 233333 26677889999999987664 4333 3456664
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=3.7e-18 Score=199.02 Aligned_cols=228 Identities=11% Similarity=0.067 Sum_probs=175.4
Q ss_pred CCCeEEEEEccCCCEEEEEeC-CCcEEEEcCCCCcceeeeecCCC-CCeEEEEEecCCCeEEEEEcC---CCcEEEE--e
Q 044075 551 NHIITDVRFRPNSTQLATSSF-DKTVRIWDAAKPNFCLQTYTGHN-NHVMSLDFHPKKNDLFCSCDG---NSEIRFW--N 623 (786)
Q Consensus 551 ~~~V~sl~fspdg~~Lasgs~-Dg~I~VWdl~s~~~~~~~~~~h~-~~V~sl~~sp~g~~ll~sgs~---Dg~I~iw--D 623 (786)
..+|++++|+|||+.||+++. ||+++||++..+. ...+..|. ..+.++.|+|+ .++++++. +....+| +
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~--~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE--TVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE--EEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCC--cEeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEe
Confidence 457999999999999999887 9999999986544 34445555 68999999998 56666654 4545555 4
Q ss_pred C--CCCeeeEeecCCeEEEEEeCCCCE-EEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC---
Q 044075 624 L--SQYSCARISKGGTVQVRFQPRLGL-LLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD--- 697 (786)
Q Consensus 624 l--~~~~~~~~~~~~i~~i~~sp~g~~-Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D--- 697 (786)
. ................+|+|+++. +++...++.+.+||+.+++.......+. .+++|+|||++|++++.+
T Consensus 97 ~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 97 TSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp TTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETT
T ss_pred ccCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCC
Confidence 4 322221111234556789998864 4455555666699999987665554333 789999999999976643
Q ss_pred --eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCC--eEEEEECCCCeEEEEcccCCCeEEEE--------
Q 044075 698 --SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ--SLELWNMAENKCMTIAAHDCVISALA-------- 765 (786)
Q Consensus 698 --~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg--~I~IwDl~~~~~~~~~~h~~~V~sla-------- 765 (786)
.|++||+.+++.. .+..+...+..++|+|||+.|+++..++ .|++||+.+++...+..|...|.+++
T Consensus 174 ~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLG 252 (582)
T ss_dssp EEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEE
T ss_pred CeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhcccccee
Confidence 5999999988765 6677888899999999999999888888 89999999988876667777777777
Q ss_pred EcCCCCEEEEEeCCCcEEEeC
Q 044075 766 QSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 766 fspdg~~LaSgs~DG~I~IWd 786 (786)
|+|||.++++++.||.++||+
T Consensus 253 ~spdg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 253 YLPDGRLAVVARREGRSAVFI 273 (582)
T ss_dssp ECTTSCEEEEEEETTEEEEEE
T ss_pred EcCCCcEEEEEEcCCcEEEEE
Confidence 999999999999999999995
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.79 E-value=5.1e-18 Score=204.11 Aligned_cols=261 Identities=14% Similarity=0.151 Sum_probs=193.0
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCC-----eEEEEEccCCCEEEEEeCC---------CcE
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHI-----ITDVRFRPNSTQLATSSFD---------KTV 575 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~-----V~sl~fspdg~~Lasgs~D---------g~I 575 (786)
....++.|+|||++|+++ |+.|++||+.+++....+..|... ..++.|+||+++|++++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 346689999999999886 999999999999988777777643 2448899999999998876 566
Q ss_pred EEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC----e--------------
Q 044075 576 RIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG----T-------------- 637 (786)
Q Consensus 576 ~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~----i-------------- 637 (786)
.+||+.+++ ...+..|...+...+|+|+|+.++++ .++.|++||+.++......... +
T Consensus 95 ~~~d~~~~~--~~~l~~~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 95 DIYDLNKRQ--LITEERIPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEETTTTE--ECCSSCCCTTEEEEEECSSTTCEEEE--ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEECCCCc--EEEcccCCCcceeeEECCCCCEEEEE--ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 799999876 44566778889999999999988754 3689999999887765543311 1
Q ss_pred ---EEEEEeCCCCEEEEEECCC------------------------------------eEEEEEcCC---Cc--EEEEEe
Q 044075 638 ---VQVRFQPRLGLLLAAASEN------------------------------------VVSIFDVET---DR--LTHSFK 673 (786)
Q Consensus 638 ---~~i~~sp~g~~Ll~gs~dg------------------------------------~I~iwD~~t---~~--~i~~l~ 673 (786)
..+.|+|||+.|+.+..|. .|++||+.+ ++ ....+.
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 2488999999998875321 588899998 72 233343
Q ss_pred ------cCCCCEEEEEEcCCCCEEEEEeC----C-eEEEEECCCCe----eEE--EE--ccCCCceE-----EEEEeCCC
Q 044075 674 ------GHSTEIHSVCWDTNGEYLASVSQ----D-SVRVWSLASGE----CIH--EL--SSSGNKFH-----SCIFHPSY 729 (786)
Q Consensus 674 ------~h~~~I~sv~~spdg~~Lasgs~----D-~I~vwDl~s~~----~i~--~l--~~~~~~I~-----sv~fspdg 729 (786)
+|...+..++|+|||++++.... + .|++||+.+++ |.. .+ ..+...|. .+.|+|||
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG 330 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG 330 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC
Confidence 37778999999999997665532 2 69999999886 221 11 33444443 67899999
Q ss_pred CEEE-EEECC-C--eEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEe
Q 044075 730 PTLM-VIGGY-Q--SLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASAS 777 (786)
Q Consensus 730 ~~L~-sgs~d-g--~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs 777 (786)
+.|+ ..+.+ | .|++||+.++....+......|..+.+ +|++.|+..+
T Consensus 331 ~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~-~d~~~i~f~~ 381 (740)
T 4a5s_A 331 NSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEA-LTSDYLYYIS 381 (740)
T ss_dssp SEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEE-ECSSEEEEEE
T ss_pred CEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEE-EeCCEEEEEE
Confidence 9877 66543 3 799999999888877766667776653 3355444433
No 163
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=9.6e-18 Score=189.18 Aligned_cols=210 Identities=12% Similarity=0.189 Sum_probs=161.2
Q ss_pred CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCC----------ccee----eeecCCCCC
Q 044075 531 KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKP----------NFCL----QTYTGHNNH 596 (786)
Q Consensus 531 g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~----------~~~~----~~~~~h~~~ 596 (786)
+.|++|+... ..+...+..+++++++.+|++++.|+ |+||+.... .... .....+...
T Consensus 23 ~~vri~~~~~-------~~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPE-------ELPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCS-------SCCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCcc-------ccCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 4677876431 12344688999999999999999888 888864311 0000 011235678
Q ss_pred eEEEEEecCCCeEEE---EEcCCCcEEEEeCCCC--------ee---eEe---ecCCeEEEEEeCC-CCEEEEEECCCeE
Q 044075 597 VMSLDFHPKKNDLFC---SCDGNSEIRFWNLSQY--------SC---ARI---SKGGTVQVRFQPR-LGLLLAAASENVV 658 (786)
Q Consensus 597 V~sl~~sp~g~~ll~---sgs~Dg~I~iwDl~~~--------~~---~~~---~~~~i~~i~~sp~-g~~Ll~gs~dg~I 658 (786)
|.+++|+|++..+++ +++.|+.|++||+.+. +. ... +...+.+++|+|+ +..|++++.|+.|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 999999999987776 7888999999998654 11 222 3567999999998 7899999999999
Q ss_pred EEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCC-------CceEEEEEeCCCC
Q 044075 659 SIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSG-------NKFHSCIFHPSYP 730 (786)
Q Consensus 659 ~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~-------~~I~sv~fspdg~ 730 (786)
++||++++..+....+|...|.+++|+|+|++|++|+.| .|++||++ ++....+..+. ..|.++.|++++.
T Consensus 175 ~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~ 253 (434)
T 2oit_A 175 AVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYV 253 (434)
T ss_dssp EEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTE
T ss_pred EEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCce
Confidence 999999997777777789999999999999999999999 99999998 66666665442 2789999999887
Q ss_pred EEEEEE-CCC------eEEEEECCCC
Q 044075 731 TLMVIG-GYQ------SLELWNMAEN 749 (786)
Q Consensus 731 ~L~sgs-~dg------~I~IwDl~~~ 749 (786)
++++.+ .+| .+++|++...
T Consensus 254 ~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 254 FAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEEccCCCccCCCCceEEEEeccC
Confidence 775543 443 3899999864
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.78 E-value=5.8e-17 Score=177.73 Aligned_cols=242 Identities=13% Similarity=0.126 Sum_probs=174.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcC-CCeeeeecCC-CCCCeEEEEEccCCCE--EEEEe-------------
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNME-NFQTECTPDD-HNHIITDVRFRPNSTQ--LATSS------------- 570 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~-t~~~~~~l~~-h~~~V~sl~fspdg~~--Lasgs------------- 570 (786)
+...+..++|+|||++|++++.+ .|.+|++. +++....... ..+.+.+++|+|++++ ++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 34468899999999999999887 99999997 7766543321 1123567899999994 44543
Q ss_pred CCCcEEEEcCCCCcceeeeec----CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC-CCeeeE--ee-----cCCeE
Q 044075 571 FDKTVRIWDAAKPNFCLQTYT----GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS-QYSCAR--IS-----KGGTV 638 (786)
Q Consensus 571 ~Dg~I~VWdl~s~~~~~~~~~----~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~-~~~~~~--~~-----~~~i~ 638 (786)
.++.+.+|++.........+. .+...+.+++|+|+++.++++...++.|++||+. +++... .. ...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 689999999974322222222 2456799999999999887666567899999998 665432 22 24578
Q ss_pred EEEEeCCCCEEEEEEC-CCeEEEEEcC--CCcEEE---EEec-------CCC------CEEEEE-EcCCCCEEEEEeC--
Q 044075 639 QVRFQPRLGLLLAAAS-ENVVSIFDVE--TDRLTH---SFKG-------HST------EIHSVC-WDTNGEYLASVSQ-- 696 (786)
Q Consensus 639 ~i~~sp~g~~Ll~gs~-dg~I~iwD~~--t~~~i~---~l~~-------h~~------~I~sv~-~spdg~~Lasgs~-- 696 (786)
.++|+|+++++++++. ++.|.+|+++ +++... .+.. |.. .+..++ |+|||++|+++..
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 8999999999988876 6899999875 455432 2221 121 488999 9999998877653
Q ss_pred C-----eEEEEECC-CCeeEE---EEccCCCceEEEEEeC---CCCEEEEEECC-CeEEEEECCCCe
Q 044075 697 D-----SVRVWSLA-SGECIH---ELSSSGNKFHSCIFHP---SYPTLMVIGGY-QSLELWNMAENK 750 (786)
Q Consensus 697 D-----~I~vwDl~-s~~~i~---~l~~~~~~I~sv~fsp---dg~~L~sgs~d-g~I~IwDl~~~~ 750 (786)
+ .|.+|++. +++... .+..+...+..++|+| ++++|++++.+ +.|.+|++....
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence 3 79999996 565443 2333445567789999 89999998875 899999987763
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.76 E-value=7.7e-17 Score=190.43 Aligned_cols=279 Identities=11% Similarity=0.069 Sum_probs=200.6
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEE--ECCCeEEEEEcCCCeeeeecCCCCCCeE---------EEEEc--cCCCE-EEEE
Q 044075 504 SIRKSSSKVTCCHFSSDGKLLASA--GHDKKVVVWNMENFQTECTPDDHNHIIT---------DVRFR--PNSTQ-LATS 569 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~~Lasg--s~Dg~V~IWdl~t~~~~~~l~~h~~~V~---------sl~fs--pdg~~-Lasg 569 (786)
.+.+|...|.+++|++++-++++. +.++...||....+.....+..|...|. .+.|+ ||++. |+.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 456789999999999886666666 4588999999765556667777776666 66676 99998 7766
Q ss_pred eC-CCcEEEEcCC--C-CcceeeeecC-----CCCCeEEEEEecCCCeEEEEEcCC---------CcEEEEeCCC-----
Q 044075 570 SF-DKTVRIWDAA--K-PNFCLQTYTG-----HNNHVMSLDFHPKKNDLFCSCDGN---------SEIRFWNLSQ----- 626 (786)
Q Consensus 570 s~-Dg~I~VWdl~--s-~~~~~~~~~~-----h~~~V~sl~~sp~g~~ll~sgs~D---------g~I~iwDl~~----- 626 (786)
+. +..|.+|++. . +. ...+.. |...+.+++|+|+++.++++.... ..|++||+.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~--~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV--PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC--CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred ECCCCeEEEEcCCCCCCCC--CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 54 5667777765 2 33 344444 667889999999999887555321 5899999988
Q ss_pred -CeeeEee-c--CCeEEEEEeCCCCEEEEEECC--------CeEEEEEcC-CC---cEEEEEecCCCCEEEEEEcCCCCE
Q 044075 627 -YSCARIS-K--GGTVQVRFQPRLGLLLAAASE--------NVVSIFDVE-TD---RLTHSFKGHSTEIHSVCWDTNGEY 690 (786)
Q Consensus 627 -~~~~~~~-~--~~i~~i~~sp~g~~Ll~gs~d--------g~I~iwD~~-t~---~~i~~l~~h~~~I~sv~~spdg~~ 690 (786)
++..... . ..+..++|+|||++|+.++.+ ..|++||+. ++ +.......|...+..++|+|||++
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 6655544 3 345668899999999988755 379999999 56 444444556788999999999997
Q ss_pred EEEEeCC---eEEEEECCCCeeEEEEccCCCc--------eEEEEEeCCCCEEEEEECCCeEEEE--ECCCCeEEEEccc
Q 044075 691 LASVSQD---SVRVWSLASGECIHELSSSGNK--------FHSCIFHPSYPTLMVIGGYQSLELW--NMAENKCMTIAAH 757 (786)
Q Consensus 691 Lasgs~D---~I~vwDl~s~~~i~~l~~~~~~--------I~sv~fspdg~~L~sgs~dg~I~Iw--Dl~~~~~~~~~~h 757 (786)
++++..+ .|.+||+.+++.......+... +..++|++++.+++++.. +.++|| |+.+++...+..|
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~ 334 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGP 334 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSS
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCC
Confidence 7777665 5777777677654333322211 467899999999998888 888888 7777787777788
Q ss_pred CCCeEEE-EEcCCCCEEEEEeCCCcEEEe
Q 044075 758 DCVISAL-AQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 758 ~~~V~sl-afspdg~~LaSgs~DG~I~IW 785 (786)
...+..+ +++.+.-++++++.+....||
T Consensus 335 ~~~~~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 335 WTEWAATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred CCeEEEEEecCCCEEEEEEcCCCCCCEEE
Confidence 8888877 555443345555666555555
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.76 E-value=1.8e-16 Score=170.15 Aligned_cols=237 Identities=9% Similarity=0.070 Sum_probs=167.7
Q ss_pred CeEEEEEcCCCCEEE-EEECCCeEEEEEcCCCeeeeecCCCC------CCeEEEEEccCCCEEEEEeCC-----------
Q 044075 511 KVTCCHFSSDGKLLA-SAGHDKKVVVWNMENFQTECTPDDHN------HIITDVRFRPNSTQLATSSFD----------- 572 (786)
Q Consensus 511 ~V~~lafSpdg~~La-sgs~Dg~V~IWdl~t~~~~~~l~~h~------~~V~sl~fspdg~~Lasgs~D----------- 572 (786)
.+.+++|+|+|++++ ++..++.|.+||+.+++.+..+..+. ..+.+++|+|++++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 578999999998665 44568999999999998887765332 337899999999999998865
Q ss_pred -CcEEEEcCCCCcc--eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC-------------
Q 044075 573 -KTVRIWDAAKPNF--CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG------------- 636 (786)
Q Consensus 573 -g~I~VWdl~s~~~--~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~------------- 636 (786)
+.|.+||+.+++. .+..+. +...+.+++|+|+++ +++ ++ +.|++||+.+++........
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVL 198 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCC
T ss_pred CCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccce
Confidence 8999999987442 122333 344688999999998 664 43 34999999988776554321
Q ss_pred --------------eEEEEEeCCCCEEEEEECC-CeEEEEEcCCCcEE-EEEecCCCCEEEEEEcC-CCCEEEEEeCCeE
Q 044075 637 --------------TVQVRFQPRLGLLLAAASE-NVVSIFDVETDRLT-HSFKGHSTEIHSVCWDT-NGEYLASVSQDSV 699 (786)
Q Consensus 637 --------------i~~i~~sp~g~~Ll~gs~d-g~I~iwD~~t~~~i-~~l~~h~~~I~sv~~sp-dg~~Lasgs~D~I 699 (786)
...+++++++......... ..+..+|..+++.. ..+..+...+.+++|+| ++++++++ .+.|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v 277 (349)
T 1jmx_B 199 YFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRL 277 (349)
T ss_dssp CCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEE
T ss_pred eeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeE
Confidence 2234455443211000001 11223555555321 22233667889999999 99999988 4499
Q ss_pred EEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEE
Q 044075 700 RVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTI 754 (786)
Q Consensus 700 ~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~ 754 (786)
.+||+.+++.+..+... ..+.+++|+|++++|++++.++.|.+||+.+++.+..
T Consensus 278 ~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 278 AKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKN 331 (349)
T ss_dssp EEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEE
T ss_pred EEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEeccccceeee
Confidence 99999999988877643 4577899999999999888889999999999887643
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.74 E-value=1e-15 Score=165.49 Aligned_cols=238 Identities=14% Similarity=0.121 Sum_probs=181.9
Q ss_pred CCCeEEEEEcCCCCEEEEEECC------------------------CeEEEEEcCCCeeeeecC-CCCCCeEEEEEccCC
Q 044075 509 SSKVTCCHFSSDGKLLASAGHD------------------------KKVVVWNMENFQTECTPD-DHNHIITDVRFRPNS 563 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~D------------------------g~V~IWdl~t~~~~~~l~-~h~~~V~sl~fspdg 563 (786)
-+.|.+|+++++|+++++...+ +.|.+||..+++.+..+. .+-.....|++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3579999999999999888777 479999999888877664 455678999999999
Q ss_pred CEEEEEeCCCcEEEEcCCCCcceeeee---------cCCCCCeEEEEEecCCCeEEEEEc-CCCcEEEEeCCCCeeeEee
Q 044075 564 TQLATSSFDKTVRIWDAAKPNFCLQTY---------TGHNNHVMSLDFHPKKNDLFCSCD-GNSEIRFWNLSQYSCARIS 633 (786)
Q Consensus 564 ~~Lasgs~Dg~I~VWdl~s~~~~~~~~---------~~h~~~V~sl~~sp~g~~ll~sgs-~Dg~I~iwDl~~~~~~~~~ 633 (786)
+++++...++.|++||.......+..+ ..+......|+++|++..++++.+ .++.|++||.. +..+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CCEEEEe
Confidence 988888889999999986543233333 344557899999995555666775 68999999954 4444433
Q ss_pred c-------------CCeEEEEEeCCCCE-EEEEECCCeEEEEEcCCCcEEEEEe--cCCCCEEEEEEcCCCCEEEEE---
Q 044075 634 K-------------GGTVQVRFQPRLGL-LLAAASENVVSIFDVETDRLTHSFK--GHSTEIHSVCWDTNGEYLASV--- 694 (786)
Q Consensus 634 ~-------------~~i~~i~~sp~g~~-Ll~gs~dg~I~iwD~~t~~~i~~l~--~h~~~I~sv~~spdg~~Lasg--- 694 (786)
. .....+++++++.. +++...++.|++||..+++.+..+. .+...+.+++|+| +..+++.
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~ 260 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKP 260 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCE
Confidence 2 22678999999444 4455567899999999898888874 3667889999999 3333332
Q ss_pred ----eCC-eEEEEECCCCeeEEEEc---cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 695 ----SQD-SVRVWSLASGECIHELS---SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 695 ----s~D-~I~vwDl~s~~~i~~l~---~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
..+ .|++||+.+++.+..+. .+...+..++++|+|..+++...++.|++|++..
T Consensus 261 ~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 334 79999999999998874 5566789999999997666777788999999754
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.74 E-value=4.5e-16 Score=171.05 Aligned_cols=261 Identities=12% Similarity=0.111 Sum_probs=193.0
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEEC----------CCeEEEEEcCCCeeeeecCCC------CCCeEEEEEccCCCEE
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLLASAGH----------DKKVVVWNMENFQTECTPDDH------NHIITDVRFRPNSTQL 566 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~Lasgs~----------Dg~V~IWdl~t~~~~~~l~~h------~~~V~sl~fspdg~~L 566 (786)
..+..+..+ .++|+|||++|+++.. ++.|.+||+.+++.+..+... ......++|+||+++|
T Consensus 45 ~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l 122 (361)
T 2oiz_A 45 GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFI 122 (361)
T ss_dssp EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEE
T ss_pred EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEE
Confidence 344445444 8999999999998863 678999999998888776532 3456789999999999
Q ss_pred EEEeC--CCcEEEEcCCCCcceeee-ecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC-CeeeEe------ec--
Q 044075 567 ATSSF--DKTVRIWDAAKPNFCLQT-YTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ-YSCARI------SK-- 634 (786)
Q Consensus 567 asgs~--Dg~I~VWdl~s~~~~~~~-~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~-~~~~~~------~~-- 634 (786)
+++.. +++|.+||+.+.+. +.. +. +. ....+.+.|++...+++.+.||.+.+|++.. ++.... +.
T Consensus 123 ~v~n~~~~~~v~v~d~~~~~~-~~~~i~-~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~ 199 (361)
T 2oiz_A 123 VLQNASPATSIGIVDVAKGDY-VEDVTA-AA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVK 199 (361)
T ss_dssp EEEEESSSEEEEEEETTTTEE-EEEEGG-GT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTT
T ss_pred EEECCCCCCeEEEEECCCCcE-EEEEec-CC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCC
Confidence 98874 58999999998763 444 33 22 2344667888766777888899999999865 443311 11
Q ss_pred CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCc--EEEEEecC------C----CCEEEEEEcCCCCEEEEEeC------
Q 044075 635 GGTVQVRFQPRLGLLLAAASENVVSIFDVETDR--LTHSFKGH------S----TEIHSVCWDTNGEYLASVSQ------ 696 (786)
Q Consensus 635 ~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~--~i~~l~~h------~----~~I~sv~~spdg~~Lasgs~------ 696 (786)
.....+.+.+++..++..+.++.|+++|+.... .+..+... . .....++|+++++.++++..
T Consensus 200 ~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~ 279 (361)
T 2oiz_A 200 DDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEG 279 (361)
T ss_dssp TSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTT
T ss_pred CCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcc
Confidence 111223446777788888889999999997553 22222210 0 11112689999887776542
Q ss_pred -----C-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC--eEEEE-cccCCCeEEEEEc
Q 044075 697 -----D-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN--KCMTI-AAHDCVISALAQS 767 (786)
Q Consensus 697 -----D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~--~~~~~-~~h~~~V~slafs 767 (786)
. .|.+||+.+++.+.++..+. +..++|+|++++|++++. +.|.+||..++ +.+.. ..+......++++
T Consensus 280 ~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~ 356 (361)
T 2oiz_A 280 THKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFH 356 (361)
T ss_dssp CTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEEC
T ss_pred cccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEec
Confidence 3 79999999999999998776 999999999999988876 99999999999 88755 5788889999999
Q ss_pred CCCC
Q 044075 768 PVTG 771 (786)
Q Consensus 768 pdg~ 771 (786)
|+|+
T Consensus 357 p~G~ 360 (361)
T 2oiz_A 357 PVGG 360 (361)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 9985
No 169
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.73 E-value=7.8e-16 Score=166.12 Aligned_cols=251 Identities=12% Similarity=0.149 Sum_probs=179.1
Q ss_pred CeEEEEEcCCCCEEEEEE---------CCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC---C--cEE
Q 044075 511 KVTCCHFSSDGKLLASAG---------HDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFD---K--TVR 576 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs---------~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D---g--~I~ 576 (786)
.+..++| ||+.|+... .++.|.+||+.+++.... ..+.+++|+|||+.|+.++.+ + .|.
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 4677777 888887652 256799999998765433 568899999999999887754 3 378
Q ss_pred EEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcC--------------------------CCcEEEEeCCCCee-
Q 044075 577 IWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDG--------------------------NSEIRFWNLSQYSC- 629 (786)
Q Consensus 577 VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~--------------------------Dg~I~iwDl~~~~~- 629 (786)
+||+.+++ ...... +.. +.++.|+|+++.+++++.. ...|++||+.+++.
T Consensus 89 ~~~~~~g~-~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 89 VADLETLS-SKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEETTTTE-EEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEECCCCc-eEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 88887765 233332 334 9999999999988866532 35799999988776
Q ss_pred eEeecCCeEEEEEeCCCCEEEEEECCC---------eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC---
Q 044075 630 ARISKGGTVQVRFQPRLGLLLAAASEN---------VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD--- 697 (786)
Q Consensus 630 ~~~~~~~i~~i~~sp~g~~Ll~gs~dg---------~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D--- 697 (786)
.......+..+.|+|++ .++++..+. .|+++| +++. ..+..+ ..+..+ +|+|++|+.++.+
T Consensus 166 ~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~ 238 (347)
T 2gop_A 166 EEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKE-EKMFEK-VSFYAV--DSDGERILLYGKPEKK 238 (347)
T ss_dssp EEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEE-EEEEEE-ESEEEE--EECSSCEEEEECCSSS
T ss_pred eeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeC--CCce-EEeccC-cceeeE--CCCCCEEEEEEccccC
Confidence 22211267789999999 777665542 355555 5543 333334 555554 8999988877632
Q ss_pred ------eEEEEECCCCeeEEEEccCCCceEE-EEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCC
Q 044075 698 ------SVRVWSLASGECIHELSSSGNKFHS-CIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQSPVT 770 (786)
Q Consensus 698 ------~I~vwDl~s~~~i~~l~~~~~~I~s-v~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg 770 (786)
.|.+|| +++.......+...+.. +.|+ ++ .+++++.++.++|| +.+++...+..+...|.+++|+|
T Consensus 239 ~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~-- 311 (347)
T 2gop_A 239 YMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE-- 311 (347)
T ss_dssp CCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS--
T ss_pred CccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--
Confidence 588888 55554444455677886 8999 88 88888999999999 87777766667788899999999
Q ss_pred CEEEEEeCCCcE-EEe
Q 044075 771 GMVASASHDKSV-KIW 785 (786)
Q Consensus 771 ~~LaSgs~DG~I-~IW 785 (786)
.++++++.++.. .||
T Consensus 312 ~~~~~~~~~~~~~~l~ 327 (347)
T 2gop_A 312 IVVYLKETATRLRELF 327 (347)
T ss_dssp SEEEEEECSSSCCEEE
T ss_pred cEEEEEcCCCChHHhe
Confidence 678888777654 565
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.72 E-value=1.5e-15 Score=166.95 Aligned_cols=260 Identities=10% Similarity=0.074 Sum_probs=187.8
Q ss_pred CCCEEEEEE------CCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeC----------CCcEEEEcCCCC
Q 044075 520 DGKLLASAG------HDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSF----------DKTVRIWDAAKP 583 (786)
Q Consensus 520 dg~~Lasgs------~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~----------Dg~I~VWdl~s~ 583 (786)
+++++++.. .|+.|.+||..+++.+..+..+..+ .++|+||+++|++++. ++.|.+||+.+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 555666553 3789999999999998888776655 8999999999998863 678999999876
Q ss_pred cceeeeecC------CCCCeEEEEEecCCCeEEEEEcC-CCcEEEEeCCCCeeeEe-ec-CCeEEEEEeCCC-CEEEEEE
Q 044075 584 NFCLQTYTG------HNNHVMSLDFHPKKNDLFCSCDG-NSEIRFWNLSQYSCARI-SK-GGTVQVRFQPRL-GLLLAAA 653 (786)
Q Consensus 584 ~~~~~~~~~------h~~~V~sl~~sp~g~~ll~sgs~-Dg~I~iwDl~~~~~~~~-~~-~~i~~i~~sp~g-~~Ll~gs 653 (786)
+. +..+.. +......++|+|++++++++... ++.|.+||+.+.+.+.. .. .....+.+.|++ ..+++.+
T Consensus 92 ~~-~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~ 170 (361)
T 2oiz_A 92 TF-EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTIC 170 (361)
T ss_dssp CE-EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEE
T ss_pred cE-EEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEEC
Confidence 63 333331 23456789999999998877654 78999999999988766 44 333345677765 6788888
Q ss_pred CCCeEEEEEcCC-CcEEEEE------ecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe--eEEEEccCC------
Q 044075 654 SENVVSIFDVET-DRLTHSF------KGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE--CIHELSSSG------ 717 (786)
Q Consensus 654 ~dg~I~iwD~~t-~~~i~~l------~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~--~i~~l~~~~------ 717 (786)
.||.+.+|++.. ++..... ..+..++ .+.+++++..++..+.+ .|.++|+.... .+..+....
T Consensus 171 ~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
T 2oiz_A 171 GDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAK 249 (361)
T ss_dssp TTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHT
T ss_pred CCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccccc
Confidence 999999999875 5544222 1122222 33345777777777777 99999997553 222222111
Q ss_pred ----CceEEEEEeCCCCEEEEEEC-----------CCeEEEEECCCCeEEEE-cccCCCeEEEEEcCCCCEEEEEeCCCc
Q 044075 718 ----NKFHSCIFHPSYPTLMVIGG-----------YQSLELWNMAENKCMTI-AAHDCVISALAQSPVTGMVASASHDKS 781 (786)
Q Consensus 718 ----~~I~sv~fspdg~~L~sgs~-----------dg~I~IwDl~~~~~~~~-~~h~~~V~slafspdg~~LaSgs~DG~ 781 (786)
.....++|+|+++.++++.. .+.|.+||+.+++.+.. ..+. +.+++|+|||++|++++. +.
T Consensus 250 ~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~ 326 (361)
T 2oiz_A 250 NWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GN 326 (361)
T ss_dssp TCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SC
T ss_pred ccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-Ce
Confidence 11123689999988887754 34899999999998744 4444 999999999999998887 99
Q ss_pred EEEeC
Q 044075 782 VKIWK 786 (786)
Q Consensus 782 I~IWd 786 (786)
|.|||
T Consensus 327 v~v~D 331 (361)
T 2oiz_A 327 VNVYD 331 (361)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99996
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.71 E-value=9.5e-15 Score=153.55 Aligned_cols=233 Identities=12% Similarity=0.138 Sum_probs=173.2
Q ss_pred CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeec------CCCCCeEEEEEecCCCeEEEEEc-CCCcEE
Q 044075 548 DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYT------GHNNHVMSLDFHPKKNDLFCSCD-GNSEIR 620 (786)
Q Consensus 548 ~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~------~h~~~V~sl~~sp~g~~ll~sgs-~Dg~I~ 620 (786)
.++-..+.+++++++++++++...++.|.+||... + ....+. ++...+.++++.+.+..++++.. .++.|.
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~-~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-R-FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-C-EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCC-c-EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 34556789999999999888888899999999873 3 233332 23457899999644455665654 388999
Q ss_pred EEeCCCCeeeEeec----CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEe--cCCCCEEEEEEcCCCCEEEEE
Q 044075 621 FWNLSQYSCARISK----GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFK--GHSTEIHSVCWDTNGEYLASV 694 (786)
Q Consensus 621 iwDl~~~~~~~~~~----~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~--~h~~~I~sv~~spdg~~Lasg 694 (786)
+||. .++.+..+. ..+..+++++++..+++...++.|.+||.. ++.+..+. .+...+.+|+++++|+++++.
T Consensus 104 ~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 104 IYNQ-YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp EECT-TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred EECC-CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 9994 455444432 357889999999877766678999999965 55555554 355678999999999987777
Q ss_pred eCC-eEEEEECCCCeeEEEEccC--CCceEEEEEeCCCCEEEEEECCC-eEEEEECCCCeEEEEcccC--CCeEEEEEcC
Q 044075 695 SQD-SVRVWSLASGECIHELSSS--GNKFHSCIFHPSYPTLMVIGGYQ-SLELWNMAENKCMTIAAHD--CVISALAQSP 768 (786)
Q Consensus 695 s~D-~I~vwDl~s~~~i~~l~~~--~~~I~sv~fspdg~~L~sgs~dg-~I~IwDl~~~~~~~~~~h~--~~V~slafsp 768 (786)
+.+ .|++||. +++.+..+..+ ...+..+++++++.++++...++ .|.+||........+..+. ..+.+++++|
T Consensus 182 ~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 260 (286)
T 1q7f_A 182 NRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMD 260 (286)
T ss_dssp GGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEET
T ss_pred CCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECC
Confidence 666 9999997 45666666544 25788999999998777777776 9999997654444444443 3478999999
Q ss_pred CCCEEEEEeCCCcEEEeC
Q 044075 769 VTGMVASASHDKSVKIWK 786 (786)
Q Consensus 769 dg~~LaSgs~DG~I~IWd 786 (786)
+|.++++ +.|+.|+||+
T Consensus 261 ~g~l~vs-~~~~~v~v~~ 277 (286)
T 1q7f_A 261 DGSVVLA-SKDYRLYIYR 277 (286)
T ss_dssp TTEEEEE-ETTTEEEEEE
T ss_pred CCcEEEE-CCCCeEEEEE
Confidence 9987777 6799999995
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=1.7e-15 Score=162.83 Aligned_cols=264 Identities=11% Similarity=0.093 Sum_probs=189.4
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
..|.+++|++++..++..+.++.+++| ..+....+..+...+.+++|++++++++++..++.|.+||..+++. ...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~-~~~ 81 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI-KRP 81 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE-EEE
Confidence 457888899988888777788899999 3456666667777889999999999888888899999999987662 333
Q ss_pred ecCCCCCeEEEEEecCCCeEEEEEcCC----CcEEEEeCCCCeeeEeec-----CCeEEEEEeCCCCEEEEEEC------
Q 044075 590 YTGHNNHVMSLDFHPKKNDLFCSCDGN----SEIRFWNLSQYSCARISK-----GGTVQVRFQPRLGLLLAAAS------ 654 (786)
Q Consensus 590 ~~~h~~~V~sl~~sp~g~~ll~sgs~D----g~I~iwDl~~~~~~~~~~-----~~i~~i~~sp~g~~Ll~gs~------ 654 (786)
...+...+.++++++++. ++++...+ +.|.+||..+........ ..+..+++++++..+++...
T Consensus 82 ~~~~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 82 FVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp EECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred eeCCCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 335667899999999986 44455555 689999998776543321 35778999999887666543
Q ss_pred CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEe-CC-eEEEEECCC-CeeEEEE------ccC-CCceEEEE
Q 044075 655 ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVS-QD-SVRVWSLAS-GECIHEL------SSS-GNKFHSCI 724 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs-~D-~I~vwDl~s-~~~i~~l------~~~-~~~I~sv~ 724 (786)
.+.|+.+|..+++...... +...+.+++|+|++++|+++. .+ .|.+||+.+ +..+..+ ... ...+..++
T Consensus 161 ~~~l~~~~~~~~~~~~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~ 239 (333)
T 2dg1_A 161 LGGVYYVSPDFRTVTPIIQ-NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCC 239 (333)
T ss_dssp CEEEEEECTTSCCEEEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEE
T ss_pred CceEEEEeCCCCEEEEeec-CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceE
Confidence 3567777776655443322 334578999999998765554 34 899999964 3322211 111 14678899
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCC------CeEEEEEcCCCCEEEEEeCC
Q 044075 725 FHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDC------VISALAQSPVTGMVASASHD 779 (786)
Q Consensus 725 fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~------~V~slafspdg~~LaSgs~D 779 (786)
+++++.++++...++.|.+||........+..+.. .+.+++|++|++.|+.++.+
T Consensus 240 ~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 240 IDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 99999987777788999999985443334433322 68999999998777666555
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.71 E-value=3.1e-15 Score=161.68 Aligned_cols=232 Identities=12% Similarity=0.125 Sum_probs=176.0
Q ss_pred CCCeEEEEEccCCCEEEEEeCC------------------------CcEEEEcCCCCcceeeee-cCCCCCeEEEEEecC
Q 044075 551 NHIITDVRFRPNSTQLATSSFD------------------------KTVRIWDAAKPNFCLQTY-TGHNNHVMSLDFHPK 605 (786)
Q Consensus 551 ~~~V~sl~fspdg~~Lasgs~D------------------------g~I~VWdl~s~~~~~~~~-~~h~~~V~sl~~sp~ 605 (786)
-..|.+|+++++++++++...+ ++|.+||..+++. ...+ .++...+..++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI-LQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE-EEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE-EeccCCCccCCceEEEECCC
Confidence 4579999999999988887777 4799999988774 3333 245567899999999
Q ss_pred CCeEEEEEcCCCcEEEEeCCCCe-eeEeec------------CCeEEEEEeC-CCCEEEEEE-CCCeEEEEEcCCCcEEE
Q 044075 606 KNDLFCSCDGNSEIRFWNLSQYS-CARISK------------GGTVQVRFQP-RLGLLLAAA-SENVVSIFDVETDRLTH 670 (786)
Q Consensus 606 g~~ll~sgs~Dg~I~iwDl~~~~-~~~~~~------------~~i~~i~~sp-~g~~Ll~gs-~dg~I~iwD~~t~~~i~ 670 (786)
++ ++++...++.|++||..... .+..+. .....++++| ++..+++.+ .++.|++|| .+++.+.
T Consensus 102 g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~ 179 (329)
T 3fvz_A 102 GN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVT 179 (329)
T ss_dssp SC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEE
T ss_pred CC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEE
Confidence 88 66688888999999987542 232221 2567899999 666666665 589999999 5577777
Q ss_pred EEecCC----------CCEEEEEEcCC-CCEEEEEeCC-eEEEEECCCCeeEEEEc--cCCCceEEEEEeCCCCEEEEEE
Q 044075 671 SFKGHS----------TEIHSVCWDTN-GEYLASVSQD-SVRVWSLASGECIHELS--SSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 671 ~l~~h~----------~~I~sv~~spd-g~~Lasgs~D-~I~vwDl~s~~~i~~l~--~~~~~I~sv~fspdg~~L~sgs 736 (786)
.+.... ....+|+++++ +.++++...+ .|++||..+++.+..+. .+...+..++|+| +..+.+.+
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g 258 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNG 258 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEEC
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCC
Confidence 664322 34889999998 6666666666 99999999899888884 3456788999999 33232222
Q ss_pred -------CCCeEEEEECCCCeEEEEc----ccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 737 -------GYQSLELWNMAENKCMTIA----AHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 737 -------~dg~I~IwDl~~~~~~~~~----~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.+..|++||+.+++.+... .+...+.+|+++|+|.++++...++.|++|+
T Consensus 259 ~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 259 KPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp CCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred CEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence 2348999999999888653 5677899999999998888888899999985
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.71 E-value=1.3e-14 Score=152.60 Aligned_cols=235 Identities=9% Similarity=0.137 Sum_probs=174.8
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC------CCCCCeEEEEEc-cCCCEEEEEeC-CCcEEEE
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD------DHNHIITDVRFR-PNSTQLATSSF-DKTVRIW 578 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~------~h~~~V~sl~fs-pdg~~Lasgs~-Dg~I~VW 578 (786)
+|-..+.+++++++++++++...++.|.+||.+ ++.+..+. .|...+.++++. +++.++++... ++.|++|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 455679999999999988888889999999987 55555553 344678999994 66665555533 7899999
Q ss_pred cCCCCcceeeee-cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-----CCeEEEEEeCCCCEEEEE
Q 044075 579 DAAKPNFCLQTY-TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-----GGTVQVRFQPRLGLLLAA 652 (786)
Q Consensus 579 dl~s~~~~~~~~-~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-----~~i~~i~~sp~g~~Ll~g 652 (786)
|. +++ .+..+ ..+...+.++++++++. ++++...++.|.+||.... .+..+. ..+..+++++++..+++.
T Consensus 106 d~-~g~-~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~-~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 106 NQ-YGQ-FVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGN-VLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp CT-TSC-EEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSC-EEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred CC-CCc-EEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCC-EEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 94 444 23433 23446789999999886 6667777899999997643 333321 357889999998866666
Q ss_pred ECCCeEEEEEcCCCcEEEEEecC--CCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCC--CceEEEEEe
Q 044075 653 ASENVVSIFDVETDRLTHSFKGH--STEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSG--NKFHSCIFH 726 (786)
Q Consensus 653 s~dg~I~iwD~~t~~~i~~l~~h--~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~--~~I~sv~fs 726 (786)
..++.|++||.. ++.+..+..+ ...+.+|+++++|+++++...+ .|.+||. +++.+..+..+. ..+.+++++
T Consensus 182 ~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~ 259 (286)
T 1q7f_A 182 NRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM 259 (286)
T ss_dssp GGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE
T ss_pred CCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC
Confidence 678999999984 5566666543 3678999999999988887654 8999995 566666665543 347899999
Q ss_pred CCCCEEEEEECCCeEEEEECCCC
Q 044075 727 PSYPTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 727 pdg~~L~sgs~dg~I~IwDl~~~ 749 (786)
|++..+++ +.++.|++|++...
T Consensus 260 ~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 260 DDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp TTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCCcEEEE-CCCCeEEEEEcccc
Confidence 99975555 78899999998653
No 175
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.69 E-value=3.1e-13 Score=141.66 Aligned_cols=272 Identities=7% Similarity=0.001 Sum_probs=194.2
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee-ecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCC
Q 044075 505 IRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC-TPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKP 583 (786)
Q Consensus 505 l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~-~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~ 583 (786)
+..+...+.+++++++|+++++...++.|.+||.. ++... .+..+...+.++++.+++.++++...++.|..||.. +
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 33456789999999999987776668899999988 54433 223355779999999999887777768899999986 3
Q ss_pred cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee----cCCeEEEEEeCCCCEEEEEECCCeEE
Q 044075 584 NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS----KGGTVQVRFQPRLGLLLAAASENVVS 659 (786)
Q Consensus 584 ~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~----~~~i~~i~~sp~g~~Ll~gs~dg~I~ 659 (786)
......+......+.++++.+++. ++++...++.|.+||. +++..... ...+..+++.+++..+++...++.|.
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIG 165 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred cEEEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence 321222223456789999998875 5556666889999998 44433321 14577899999987776666678999
Q ss_pred EEEcCCCcEEEE-EecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEE-EccCCCceEEEEEeCCCCEEEEEE
Q 044075 660 IFDVETDRLTHS-FKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHE-LSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 660 iwD~~t~~~i~~-l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~-l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
+||. +++.... +..+...+.+++++++|.++++...+ .|.+||. +++.... +......+.++++++++..+++..
T Consensus 166 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 166 RITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred EEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEecc
Confidence 9999 6655432 33345678899999999977766555 8999999 6654332 233456789999999998555544
Q ss_pred CCCeEEEEECCCCeEEEE--cccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 737 GYQSLELWNMAENKCMTI--AAHDCVISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 737 ~dg~I~IwDl~~~~~~~~--~~h~~~V~slafspdg~~LaSgs~DG~I~I 784 (786)
.++.|.+||. ++....+ ..+...+.++++ +++.++++.+.++.+++
T Consensus 244 ~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~ 291 (299)
T 2z2n_A 244 GANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKL 291 (299)
T ss_dssp TTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEE
T ss_pred CCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEE
Confidence 6789999998 4554433 345578999999 88887776654544443
No 176
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.69 E-value=7.4e-15 Score=176.50 Aligned_cols=262 Identities=11% Similarity=0.107 Sum_probs=181.1
Q ss_pred EEEEEcCCCCEEEEEECC---------CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCC
Q 044075 513 TCCHFSSDGKLLASAGHD---------KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKP 583 (786)
Q Consensus 513 ~~lafSpdg~~Lasgs~D---------g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~ 583 (786)
..++|||||++|++++.+ +.+.|||+.+++.. .+..|...+..++|+|||+.||.+. |+.|++|++.++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~ 142 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL 142 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC
Confidence 458899999999998876 56779999998765 4667788899999999999999885 689999999887
Q ss_pred cceeeeecCCCCCe-----------------EEEEEecCCCeEEEEEcCCC-----------------------------
Q 044075 584 NFCLQTYTGHNNHV-----------------MSLDFHPKKNDLFCSCDGNS----------------------------- 617 (786)
Q Consensus 584 ~~~~~~~~~h~~~V-----------------~sl~~sp~g~~ll~sgs~Dg----------------------------- 617 (786)
.....+..++...+ ..+.|+|||+.|++....++
T Consensus 143 ~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 143 PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred ceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 63333333433333 35899999998876542222
Q ss_pred ------cEEEEeCCC---C---eeeEee--------cCCeEEEEEeCCCCEEEEEECC----CeEEEEEcCCCc----EE
Q 044075 618 ------EIRFWNLSQ---Y---SCARIS--------KGGTVQVRFQPRLGLLLAAASE----NVVSIFDVETDR----LT 669 (786)
Q Consensus 618 ------~I~iwDl~~---~---~~~~~~--------~~~i~~i~~sp~g~~Ll~gs~d----g~I~iwD~~t~~----~i 669 (786)
.|++||+.+ + +..... ...+..++|+|+++.++..... ..|.+||+.+++ +.
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~ 302 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCL 302 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEEC
T ss_pred CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccccee
Confidence 588899988 6 333332 1236778999999866665442 379999999886 21
Q ss_pred --EEE--ecCCCCEE-----EEEEcCCCCEEE-EEeCC----eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEE
Q 044075 670 --HSF--KGHSTEIH-----SVCWDTNGEYLA-SVSQD----SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVI 735 (786)
Q Consensus 670 --~~l--~~h~~~I~-----sv~~spdg~~La-sgs~D----~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sg 735 (786)
..+ ..|...|. .+.|+|||+.|+ ..+++ .|++||+..+++. .+......+..+.. ++++.|+..
T Consensus 303 ~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~ 380 (740)
T 4a5s_A 303 VARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYI 380 (740)
T ss_dssp GGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEE
T ss_pred EEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEEEEE
Confidence 111 34555554 789999999877 66543 6999999877655 44444555665543 447777666
Q ss_pred ECC-----C--eEEEEECCCCeEE-EEcc----cCCCeEEEEEcCCCCEEEEEeC
Q 044075 736 GGY-----Q--SLELWNMAENKCM-TIAA----HDCVISALAQSPVTGMVASASH 778 (786)
Q Consensus 736 s~d-----g--~I~IwDl~~~~~~-~~~~----h~~~V~slafspdg~~LaSgs~ 778 (786)
+.. + .|+..++..+... .+.. ....+..+.|+|++++++....
T Consensus 381 ~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s 435 (740)
T 4a5s_A 381 SNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCS 435 (740)
T ss_dssp ESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEEC
T ss_pred EecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeC
Confidence 654 2 4555566655443 3331 2457889999999997665443
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.69 E-value=2.7e-15 Score=164.32 Aligned_cols=240 Identities=10% Similarity=0.085 Sum_probs=167.6
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEE--ccCCCEEEEEe------------
Q 044075 505 IRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRF--RPNSTQLATSS------------ 570 (786)
Q Consensus 505 l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~f--spdg~~Lasgs------------ 570 (786)
..+|...+.+++|+|||+.|++++.++.|++||+.+++....+..+...+....| ++++++++...
T Consensus 76 t~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 76 TEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp CCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred eeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccccccc
Confidence 3445555667889999999999999999999999999887777777666655544 88999887432
Q ss_pred ----------CCCcEEEEcCCCCcceeeeecCCCCCeEEEEEec-CCCeEEEEEcC-----CCcEEEEeCCCCeeeEeec
Q 044075 571 ----------FDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP-KKNDLFCSCDG-----NSEIRFWNLSQYSCARISK 634 (786)
Q Consensus 571 ----------~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp-~g~~ll~sgs~-----Dg~I~iwDl~~~~~~~~~~ 634 (786)
.+..|.+||+.+++ ...+..+...+..+.|+| ++..++++... ...|.++|+..........
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTGE--STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTCC--EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC
T ss_pred chhhhhhccCCcceEEEEECCCCc--eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee
Confidence 34679999998875 444555667899999999 88877655543 3478888987765544433
Q ss_pred C----CeEEEEEeCCCCEEEEEEC-CC----eEEEEEcCCCcEEE--EEecCCCC---EEEEEEcCCCCEEEEE------
Q 044075 635 G----GTVQVRFQPRLGLLLAAAS-EN----VVSIFDVETDRLTH--SFKGHSTE---IHSVCWDTNGEYLASV------ 694 (786)
Q Consensus 635 ~----~i~~i~~sp~g~~Ll~gs~-dg----~I~iwD~~t~~~i~--~l~~h~~~---I~sv~~spdg~~Lasg------ 694 (786)
. .+..+.|+|+|+.|+..+. ++ .|++||+.+++... .+.++... ...++|+|||+.|+..
T Consensus 234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 313 (388)
T 3pe7_A 234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSG 313 (388)
T ss_dssp CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC---------
T ss_pred CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccc
Confidence 2 2566789999997766554 22 39999999986433 33321000 1123789999988754
Q ss_pred ---eCC-eEEEEECCCCeeEEEEccCCC-----------ceEEEEEeCCCCEEEEEEC-CCeEEEE--ECC
Q 044075 695 ---SQD-SVRVWSLASGECIHELSSSGN-----------KFHSCIFHPSYPTLMVIGG-YQSLELW--NMA 747 (786)
Q Consensus 695 ---s~D-~I~vwDl~s~~~i~~l~~~~~-----------~I~sv~fspdg~~L~sgs~-dg~I~Iw--Dl~ 747 (786)
..+ .|++||+.+++.. .+..+.. .+.+++|+|+|+.|+.++. ++...|| ++.
T Consensus 314 ~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 314 YKIENDPFLYVFNMKNGTQH-RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp ---CCCCEEEEEETTTTEEE-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred cccCCCCEEEEEeccCCceE-EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 334 8999999987653 4444544 5788899999998888775 4544444 544
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.68 E-value=1.2e-13 Score=160.68 Aligned_cols=274 Identities=12% Similarity=0.064 Sum_probs=203.4
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcC--CCeeeeecCCCCCCeEEEEEc----cCCCEEEEEeC-CCcEEEEcCCC
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNME--NFQTECTPDDHNHIITDVRFR----PNSTQLATSSF-DKTVRIWDAAK 582 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~--t~~~~~~l~~h~~~V~sl~fs----pdg~~Lasgs~-Dg~I~VWdl~s 582 (786)
..+.++.|+|||++|++++.|+.|.+||+. +.+.+..+.... ....++|+ |||++++++++ +++|.|+|..+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 357799999999999999999999999996 788887776543 46799999 69998888776 59999999988
Q ss_pred CcceeeeecC----------CC-CCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee----cCCeEEEEEeCCCC
Q 044075 583 PNFCLQTYTG----------HN-NHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS----KGGTVQVRFQPRLG 647 (786)
Q Consensus 583 ~~~~~~~~~~----------h~-~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~----~~~i~~i~~sp~g~ 647 (786)
.+. +..+.- |. ..+..+.+++++..+++....+|.|.++|....+..... ......+.|+|+++
T Consensus 276 ~~~-~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 276 LEP-KKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHR 354 (567)
T ss_dssp CCE-EEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSC
T ss_pred CcE-EEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCC
Confidence 763 333221 22 267889999988888888888999999999875433221 13456788999999
Q ss_pred EEEEEEC-CCeEEEEEcCCCcEEEEEec-----CCCCEEEEEEcCCCC-EEEEEe-C-CeEEEEECCC-------CeeEE
Q 044075 648 LLLAAAS-ENVVSIFDVETDRLTHSFKG-----HSTEIHSVCWDTNGE-YLASVS-Q-DSVRVWSLAS-------GECIH 711 (786)
Q Consensus 648 ~Ll~gs~-dg~I~iwD~~t~~~i~~l~~-----h~~~I~sv~~spdg~-~Lasgs-~-D~I~vwDl~s-------~~~i~ 711 (786)
+|++++. ++.|.++|+.+++++..+.. |...-..+ ++|++. +++++. . +.|.|+|..+ .+.+.
T Consensus 355 ~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~ 433 (567)
T 1qks_A 355 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILD 433 (567)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEE
Confidence 9988875 68999999999988776653 33222222 578754 444543 3 3999999988 67888
Q ss_pred EEccCCCceEEEEEeCCCCEEEEEEC-------CCeEEEEECCCC-----e-E-EEEc--------ccCCCeEEEEEcCC
Q 044075 712 ELSSSGNKFHSCIFHPSYPTLMVIGG-------YQSLELWNMAEN-----K-C-MTIA--------AHDCVISALAQSPV 769 (786)
Q Consensus 712 ~l~~~~~~I~sv~fspdg~~L~sgs~-------dg~I~IwDl~~~-----~-~-~~~~--------~h~~~V~slafspd 769 (786)
++......-..+.++|+++++++... .++|.+||+.+. . . ..+. .....+..+.|+++
T Consensus 434 ~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (567)
T 1qks_A 434 SFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKD 513 (567)
T ss_dssp EEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTT
T ss_pred EEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCC
Confidence 88765444455778999999998763 359999999876 2 1 1221 12457899999999
Q ss_pred CCEEEEEeC-----CCcEEEeC
Q 044075 770 TGMVASASH-----DKSVKIWK 786 (786)
Q Consensus 770 g~~LaSgs~-----DG~I~IWd 786 (786)
|+.+..+.. ++.|.|+|
T Consensus 514 G~~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 514 GTEVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp SSEEEEEEECCTTSCCEEEEEE
T ss_pred CCEEEEEeecCCCCCCcEEEEE
Confidence 997776533 68888875
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=3.1e-15 Score=176.68 Aligned_cols=239 Identities=9% Similarity=0.050 Sum_probs=164.8
Q ss_pred EEEEc--CCCCE-EEEEEC-CCeEEEEEcC--CCeeeeecCC-----CCCCeEEEEEccCCCEEEEEeCC----------
Q 044075 514 CCHFS--SDGKL-LASAGH-DKKVVVWNME--NFQTECTPDD-----HNHIITDVRFRPNSTQLATSSFD---------- 572 (786)
Q Consensus 514 ~lafS--pdg~~-Lasgs~-Dg~V~IWdl~--t~~~~~~l~~-----h~~~V~sl~fspdg~~Lasgs~D---------- 572 (786)
...|+ |||+. |+.++. +..|.+|++. .......+.. |...+.+++|+|||+.|++++.|
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 45555 99998 776654 4567777765 2033445555 67789999999999999998877
Q ss_pred CcEEEEcCCC------Ccceeeeec-CCCCCeEEEEEecCCCeEEEEEcCC-------CcEEEEeCC-CC---eeeEee-
Q 044075 573 KTVRIWDAAK------PNFCLQTYT-GHNNHVMSLDFHPKKNDLFCSCDGN-------SEIRFWNLS-QY---SCARIS- 633 (786)
Q Consensus 573 g~I~VWdl~s------~~~~~~~~~-~h~~~V~sl~~sp~g~~ll~sgs~D-------g~I~iwDl~-~~---~~~~~~- 633 (786)
..|++||+.+ +. ...+. .+...+..++|+|+|+.+++++... ..|++||+. ++ +.....
T Consensus 161 ~~i~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSA--VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEETTSTTTTCGGG--SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred eEEEEEECCCCccccCCc--eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 5899999987 43 34444 5567788999999999887655432 479999998 56 443333
Q ss_pred --cCCeEEEEEeCCCCEEEEEECCC--eEEEEEcCCCcEEEEEecCCCC--------EEEEEEcCCCCEEEEEeCCeEEE
Q 044075 634 --KGGTVQVRFQPRLGLLLAAASEN--VVSIFDVETDRLTHSFKGHSTE--------IHSVCWDTNGEYLASVSQDSVRV 701 (786)
Q Consensus 634 --~~~i~~i~~sp~g~~Ll~gs~dg--~I~iwD~~t~~~i~~l~~h~~~--------I~sv~~spdg~~Lasgs~D~I~v 701 (786)
...+..+.|+|+++.++++..++ .|++||+.+++.......+... +.+++|+++++++++++.+.++|
T Consensus 239 ~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (662)
T 3azo_A 239 GPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVL 318 (662)
T ss_dssp ETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEE
T ss_pred CCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEE
Confidence 35678899999999777776777 6777777677655443333222 56789999999988887664555
Q ss_pred E--ECCCCeeEEEEccCCCceEEE-EEeCCCCEEEEEECCC--eEEEEECCCCeEEEEc
Q 044075 702 W--SLASGECIHELSSSGNKFHSC-IFHPSYPTLMVIGGYQ--SLELWNMAENKCMTIA 755 (786)
Q Consensus 702 w--Dl~s~~~i~~l~~~~~~I~sv-~fspdg~~L~sgs~dg--~I~IwDl~~~~~~~~~ 755 (786)
| |+.+++ +..+..+...+..+ +++.+.-++++++.+. .|++||+.+++...+.
T Consensus 319 ~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 319 GILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp EEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred EEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEee
Confidence 5 766665 66777777777766 5544333333444443 5677788787766553
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.66 E-value=1.8e-13 Score=146.91 Aligned_cols=235 Identities=13% Similarity=0.127 Sum_probs=171.9
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC----CcEE
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFD----KTVR 576 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D----g~I~ 576 (786)
.+..+..+...+.+++|+++|++++++..++.|.+||.++++.......+...+.+++|+++++++++...+ +.|.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 445566677788999999999988888889999999998877665554566789999999999887777666 6899
Q ss_pred EEcCCCCcceeeeec--CCCCCeEEEEEecCCCeEEEEEcC------CCcEEEEeCCCCeeeEee--cCCeEEEEEeCCC
Q 044075 577 IWDAAKPNFCLQTYT--GHNNHVMSLDFHPKKNDLFCSCDG------NSEIRFWNLSQYSCARIS--KGGTVQVRFQPRL 646 (786)
Q Consensus 577 VWdl~s~~~~~~~~~--~h~~~V~sl~~sp~g~~ll~sgs~------Dg~I~iwDl~~~~~~~~~--~~~i~~i~~sp~g 646 (786)
+||..+... ...+. .+...+.+++++|++..++ +... .+.|..||..+.+..... ...+..++|++++
T Consensus 116 ~~d~~~~~~-~~~~~~~~~~~~~~~i~~d~~g~l~v-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg 193 (333)
T 2dg1_A 116 AATENGDNL-QDIIEDLSTAYCIDDMVFDSKGGFYF-TDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDE 193 (333)
T ss_dssp EECTTSCSC-EEEECSSSSCCCEEEEEECTTSCEEE-EECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTS
T ss_pred EEeCCCCEE-EEEEccCccCCcccceEECCCCCEEE-EeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCC
Confidence 999987653 21222 3446789999999986544 4442 356777777654443322 2456789999999
Q ss_pred CEEEEEE-CCCeEEEEEcCC-CcEEEE--------EecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc
Q 044075 647 GLLLAAA-SENVVSIFDVET-DRLTHS--------FKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS 715 (786)
Q Consensus 647 ~~Ll~gs-~dg~I~iwD~~t-~~~i~~--------l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~ 715 (786)
+.++++. .++.|.+||+.+ +..+.. +.++ ..+..++++++|+++++...+ .|.+||. +++.+..+..
T Consensus 194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~ 271 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILI 271 (333)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEEC
T ss_pred CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEc
Confidence 8776665 478999999964 332211 1122 467889999999988887776 8999998 5666666655
Q ss_pred CCC------ceEEEEEeCCCCEEEEEECCC
Q 044075 716 SGN------KFHSCIFHPSYPTLMVIGGYQ 739 (786)
Q Consensus 716 ~~~------~I~sv~fspdg~~L~sgs~dg 739 (786)
+.. .+.+++|++++..|++++.++
T Consensus 272 ~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 272 PGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp TTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 433 688999999988887777663
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.66 E-value=1.2e-14 Score=173.91 Aligned_cols=241 Identities=6% Similarity=0.013 Sum_probs=177.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCC-----eEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCc--------
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDK-----KVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKT-------- 574 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg-----~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~-------- 574 (786)
|...+..++|||||++||.+..++ .|+|||+.+++.+.....+ ..+.+++|+||++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccc
Confidence 545688999999999999876543 8999999998876543222 23678999999999999988776
Q ss_pred --------EEEEcCCCCcce-eeee--cCCCCCeEEEEEecCCCeEEEEEcC----CCcEEEEeCCC------C--eeeE
Q 044075 575 --------VRIWDAAKPNFC-LQTY--TGHNNHVMSLDFHPKKNDLFCSCDG----NSEIRFWNLSQ------Y--SCAR 631 (786)
Q Consensus 575 --------I~VWdl~s~~~~-~~~~--~~h~~~V~sl~~sp~g~~ll~sgs~----Dg~I~iwDl~~------~--~~~~ 631 (786)
|++|++.++... ...+ ..|...+.++.|+|+++.+++++.. +..|++||+.+ + ....
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 999999876522 1222 2345668899999999988876642 56899999976 3 2222
Q ss_pred ee--cCCeEEEEEeCCCCEEEEEECC----CeEEEEEcCCCc--EEEEEecCCC--CEEEEEEcCCCCEEEEEeCC---e
Q 044075 632 IS--KGGTVQVRFQPRLGLLLAAASE----NVVSIFDVETDR--LTHSFKGHST--EIHSVCWDTNGEYLASVSQD---S 698 (786)
Q Consensus 632 ~~--~~~i~~i~~sp~g~~Ll~gs~d----g~I~iwD~~t~~--~i~~l~~h~~--~I~sv~~spdg~~Lasgs~D---~ 698 (786)
.. ...+. ..|+++++.|+..+.. ..|.+||+.++. ....+..|.. .+..++|++++.++++...+ .
T Consensus 282 l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 282 LIDNFEGEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp EECSSSSCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred eeCCCCcEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 22 22333 3588999988887764 369999998764 2334444544 68889999777788887766 4
Q ss_pred EEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEEC----CCeEEEEECCCCe
Q 044075 699 VRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGG----YQSLELWNMAENK 750 (786)
Q Consensus 699 I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~----dg~I~IwDl~~~~ 750 (786)
|.+||+.+++.+..+..+...+..+.++|++..++.... .+.|++||+.+++
T Consensus 361 l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 361 LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 788898788888888877778889999999877665533 3589999998876
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.65 E-value=6e-14 Score=148.45 Aligned_cols=234 Identities=11% Similarity=0.067 Sum_probs=171.8
Q ss_pred eeeeecCCCCCCeEEEEEccCCC-EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEE
Q 044075 542 QTECTPDDHNHIITDVRFRPNST-QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIR 620 (786)
Q Consensus 542 ~~~~~l~~h~~~V~sl~fspdg~-~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~ 620 (786)
..+..+..+.....+++|+|+++ +++++..++.|.+||..++ ...+..+...+.++++++++. ++++...++.|.
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~i~ 93 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---LSPEMHPSHHQNGHCLNKQGH-LIACSHGLRRLE 93 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC---EEEEESSCSSEEEEEECTTCC-EEEEETTTTEEE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC---eEEEECCCCCcceeeECCCCc-EEEEecCCCeEE
Confidence 33444555666788999999998 7788888999999999875 445556777899999999887 555666678999
Q ss_pred EEeCCCCeeeEeec-------CCeEEEEEeCCCCEEEEE----E-------------CCCeEEEEEcCCCcEEEEEecCC
Q 044075 621 FWNLSQYSCARISK-------GGTVQVRFQPRLGLLLAA----A-------------SENVVSIFDVETDRLTHSFKGHS 676 (786)
Q Consensus 621 iwDl~~~~~~~~~~-------~~i~~i~~sp~g~~Ll~g----s-------------~dg~I~iwD~~t~~~i~~l~~h~ 676 (786)
+||..+++...... ..+..++++++|..+++. + ..+.|..+|.. ++. ..+..+.
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~ 171 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDR 171 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCC
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCC
Confidence 99997776544322 234568999999877763 2 13467777665 443 3445566
Q ss_pred CCEEEEEEcCCCCEEEEEeCC-eEEEEECC-CCee---EEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeE
Q 044075 677 TEIHSVCWDTNGEYLASVSQD-SVRVWSLA-SGEC---IHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKC 751 (786)
Q Consensus 677 ~~I~sv~~spdg~~Lasgs~D-~I~vwDl~-s~~~---i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~ 751 (786)
.....++|+|++++|++.+.+ .|.+||+. +++. ...+..+...+..++++++|.++++. ++.|.+||......
T Consensus 172 ~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~ 249 (296)
T 3e5z_A 172 VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGDEL 249 (296)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSCEE
T ss_pred CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCCEE
Confidence 778999999999998666666 99999997 5544 33333344556789999999855555 78999999985444
Q ss_pred EEEcccCCCeEEEEE-cCCCCEEEEEeCCCcEEE
Q 044075 752 MTIAAHDCVISALAQ-SPVTGMVASASHDKSVKI 784 (786)
Q Consensus 752 ~~~~~h~~~V~slaf-spdg~~LaSgs~DG~I~I 784 (786)
..+..+.. +++++| .++++.|++++.++.+++
T Consensus 250 ~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 250 GRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp EEEECSSC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred EEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 45556666 999999 589999999988876654
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.65 E-value=7.2e-14 Score=147.84 Aligned_cols=240 Identities=11% Similarity=0.043 Sum_probs=176.7
Q ss_pred EEeecCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 503 SSIRKSSSKVTCCHFSSDGK-LLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~-~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
..+..+.....+++|+|+|+ +++++..++.|.+|+..++ ...+..+...+.+++|+++++++++...++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 34445667789999999998 7788888999999999887 55666677889999999999987777667899999997
Q ss_pred CCcceeeeecC----CCCCeEEEEEecCCCeEEEE----Ec-------------CCCcEEEEeCCCCeeeEeec--CCeE
Q 044075 582 KPNFCLQTYTG----HNNHVMSLDFHPKKNDLFCS----CD-------------GNSEIRFWNLSQYSCARISK--GGTV 638 (786)
Q Consensus 582 s~~~~~~~~~~----h~~~V~sl~~sp~g~~ll~s----gs-------------~Dg~I~iwDl~~~~~~~~~~--~~i~ 638 (786)
+++. ...... ....+.+++++|+|.. +++ +. ..+.|..++.. ++...... ....
T Consensus 99 ~g~~-~~~~~~~~~~~~~~~~~i~~d~~G~l-~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~ 175 (296)
T 3e5z_A 99 GGEW-ESIADSFEGKKLNSPNDVCLAPDGSL-WFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPN 175 (296)
T ss_dssp TCCE-EEEECEETTEECCCCCCEEECTTSCE-EEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEE
T ss_pred CCcE-EEEeeccCCCCCCCCCCEEECCCCCE-EEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCc
Confidence 7663 222111 1235678999999874 445 22 13467777665 44333222 4567
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEEcC-CCcE---EEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEc
Q 044075 639 QVRFQPRLGLLLAAASENVVSIFDVE-TDRL---THSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELS 714 (786)
Q Consensus 639 ~i~~sp~g~~Ll~gs~dg~I~iwD~~-t~~~---i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~ 714 (786)
.++|+|+++.+++.+.++.|++||+. +++. ...+..+...+.+++++++|+++++. .+.|.+||.. ++.+..+.
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~~ 253 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRVL 253 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEEE
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEEE
Confidence 89999999999666667899999997 4554 33343355567789999999977776 4599999986 77888887
Q ss_pred cCCCceEEEEE-eCCCCEEEEEECCCeEEEEECCCCeE
Q 044075 715 SSGNKFHSCIF-HPSYPTLMVIGGYQSLELWNMAENKC 751 (786)
Q Consensus 715 ~~~~~I~sv~f-spdg~~L~sgs~dg~I~IwDl~~~~~ 751 (786)
.+.. +.+++| .|+++.|++++.+ .|..++..+.++
T Consensus 254 ~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 254 TPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp CSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred CCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 7766 899999 5888989988876 566667766654
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.65 E-value=1.7e-14 Score=155.59 Aligned_cols=232 Identities=14% Similarity=0.187 Sum_probs=162.4
Q ss_pred CCeEEEEEcCCCCEEEEEECC---C--eEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC------------
Q 044075 510 SKVTCCHFSSDGKLLASAGHD---K--KVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFD------------ 572 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~D---g--~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D------------ 572 (786)
..+.+++|||||++||.++.+ + .|.+|++.+++.......+ . +.+++|+||++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 458899999999999987754 3 4888898887766554433 3 9999999999988887642
Q ss_pred ---------------CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC------C---cEEEEeCCCCe
Q 044075 573 ---------------KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN------S---EIRFWNLSQYS 628 (786)
Q Consensus 573 ---------------g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D------g---~I~iwDl~~~~ 628 (786)
..|++||+.+++. +..+.. . .+..+.|+|++ +++++..+ . .|.++| +++
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~-~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~ 209 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEV-IEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGK 209 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEE-EEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTE
T ss_pred cceeecCcccccCccceEEEEECCCCeE-EeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC--CCc
Confidence 5799999987663 133333 3 78899999998 55455433 1 355555 554
Q ss_pred eeEeecCCeEEEEEeCCCCEEEEEECC--------CeEEEEEcCCCcEEEEEecCCCCEEE-EEEcCCCCEEEEEeCC-e
Q 044075 629 CARISKGGTVQVRFQPRLGLLLAAASE--------NVVSIFDVETDRLTHSFKGHSTEIHS-VCWDTNGEYLASVSQD-S 698 (786)
Q Consensus 629 ~~~~~~~~i~~i~~sp~g~~Ll~gs~d--------g~I~iwD~~t~~~i~~l~~h~~~I~s-v~~spdg~~Lasgs~D-~ 698 (786)
....... .....++|+|+.|+.++.+ ..|++|| +++.......|...+.. +.|+ ++ ++++++.+ .
T Consensus 210 ~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 210 EEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp EEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTE
T ss_pred eEEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCc
Confidence 4433332 2223349999998888754 3688888 55555444556777886 9999 88 88888877 8
Q ss_pred EEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeE-EEEECCCCeEEEEcccCCC
Q 044075 699 VRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSL-ELWNMAENKCMTIAAHDCV 760 (786)
Q Consensus 699 I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I-~IwDl~~~~~~~~~~h~~~ 760 (786)
++|| +.+++.. .+..+...|.+++|+| ..+++++.++.. .||.+. ++...+..|...
T Consensus 285 ~~l~-~~~g~~~-~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~~~~lt~~n~~ 342 (347)
T 2gop_A 285 VNLY-IWDGEIK-PIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GEEKQLTDYNDP 342 (347)
T ss_dssp EEEE-EESSSEE-EEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SSEEECCCTTST
T ss_pred EEEE-EcCCceE-EEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-CcEEEeccccHh
Confidence 8998 7766554 3444577899999999 677777777654 677666 666666666543
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.63 E-value=1.9e-13 Score=147.82 Aligned_cols=249 Identities=10% Similarity=0.053 Sum_probs=185.9
Q ss_pred CCCeEEEEEcCCCeeeeecC------CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEE
Q 044075 529 HDKKVVVWNMENFQTECTPD------DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDF 602 (786)
Q Consensus 529 ~Dg~V~IWdl~t~~~~~~l~------~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~ 602 (786)
.++.|.+||.++++....+. .......++.+. +++++++...++.|.+||..+.+. +..+. .......+++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~-~~~i~-~~~~p~~i~~ 91 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKE-VGRIT-GFTSPRYIHF 91 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCE-EEEEE-CCSSEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEE-EEEcC-CCCCCcEEEE
Confidence 37899999999988776541 222456778874 444555556679999999998773 44443 3467899999
Q ss_pred ecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--C------CeEEEEEeCCCCEEEEEE--CCCeEEEEEcCCCcEEEEE
Q 044075 603 HPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--G------GTVQVRFQPRLGLLLAAA--SENVVSIFDVETDRLTHSF 672 (786)
Q Consensus 603 sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--~------~i~~i~~sp~g~~Ll~gs--~dg~I~iwD~~t~~~i~~l 672 (786)
++++ .++++...++.|.+||..+.+...... . ....+++ +++.++++. .++.|.+||..+++.+..+
T Consensus 92 ~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 92 LSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp EETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred eCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence 8887 677666578999999999988775443 2 3456666 456677766 3789999999999988887
Q ss_pred ecCCCCEEEEEEcCCCCEEEEEeC-----------CeEEEEECCCCeeEEEEccC-CCceEEEEEeCCCCEEEEEECCCe
Q 044075 673 KGHSTEIHSVCWDTNGEYLASVSQ-----------DSVRVWSLASGECIHELSSS-GNKFHSCIFHPSYPTLMVIGGYQS 740 (786)
Q Consensus 673 ~~h~~~I~sv~~spdg~~Lasgs~-----------D~I~vwDl~s~~~i~~l~~~-~~~I~sv~fspdg~~L~sgs~dg~ 740 (786)
.. ......++++++|++++++.. +.|.+||..+++.+..+... ......++|+|+++.|+++.. .
T Consensus 169 ~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~ 245 (328)
T 3dsm_A 169 TI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--D 245 (328)
T ss_dssp EC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--S
T ss_pred Ec-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--E
Confidence 74 344578899999998777654 37999999999888777543 346899999999999888765 8
Q ss_pred EEEEECCCCeEEE--E-cccCCCeEEEEEcCC-CCEEEEE----eCCCcEEEeC
Q 044075 741 LELWNMAENKCMT--I-AAHDCVISALAQSPV-TGMVASA----SHDKSVKIWK 786 (786)
Q Consensus 741 I~IwDl~~~~~~~--~-~~h~~~V~slafspd-g~~LaSg----s~DG~I~IWd 786 (786)
|.+||..+++... + ..+.....+++++|+ +.++++. ..++.|.+||
T Consensus 246 v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 246 IWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp EEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEEC
T ss_pred EEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEEC
Confidence 9999998877542 1 112467899999995 5555555 5678999986
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.63 E-value=1.4e-14 Score=158.49 Aligned_cols=235 Identities=9% Similarity=0.059 Sum_probs=163.3
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEE-------------------EEEccCCCEEEEE----
Q 044075 513 TCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITD-------------------VRFRPNSTQLATS---- 569 (786)
Q Consensus 513 ~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~s-------------------l~fspdg~~Lasg---- 569 (786)
.++.|+|||++|+.++.++.|++||+.+++.......+...... +.|+|+++.++.+
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 84 FGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp TTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred ccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 34789999999999999999999999988776666545443333 3567777766554
Q ss_pred -eCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEec-CCCeEEEEEcCC-----CcEEEEeCCCCeeeEeecC----CeE
Q 044075 570 -SFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP-KKNDLFCSCDGN-----SEIRFWNLSQYSCARISKG----GTV 638 (786)
Q Consensus 570 -s~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp-~g~~ll~sgs~D-----g~I~iwDl~~~~~~~~~~~----~i~ 638 (786)
..+..|++||+.+++. ..+..+...+..+.|+| ++..++++.... ..|.+||+...+....... .+.
T Consensus 164 ~~~~~~l~~~d~~~g~~--~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 241 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGEL--EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCT 241 (396)
T ss_dssp TCCCEEEEEEETTTCCE--EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEE
T ss_pred CCCcceEEEEECCCCcE--EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcccc
Confidence 3567899999988662 33335667899999999 676666554322 4699999877654443332 356
Q ss_pred EEEEeCCCCEEEEEECC-----CeEEEEEcCCCcEEEEEecCCCCEEEEEEcC-CCCEEEEEe----------------C
Q 044075 639 QVRFQPRLGLLLAAASE-----NVVSIFDVETDRLTHSFKGHSTEIHSVCWDT-NGEYLASVS----------------Q 696 (786)
Q Consensus 639 ~i~~sp~g~~Ll~gs~d-----g~I~iwD~~t~~~i~~l~~h~~~I~sv~~sp-dg~~Lasgs----------------~ 696 (786)
.+.|+|+++.|+.++.+ +.|++||+.+++...... .. .+. +.|+| +|++|++++ .
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp EEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC-SEE-EEEECSSSSEEEEEECCC----------CCCC
T ss_pred ceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CC-CCC-CCccCCCCceEEEecCCcceeeccccccccCC
Confidence 68999999988777654 449999999886544332 22 233 89999 999888754 2
Q ss_pred C-eEEEEECCCCeeEEEEccCCC-----------ceEEEEEeCCCCEEEEEECC-C--eEEEEECCCCeEEE
Q 044075 697 D-SVRVWSLASGECIHELSSSGN-----------KFHSCIFHPSYPTLMVIGGY-Q--SLELWNMAENKCMT 753 (786)
Q Consensus 697 D-~I~vwDl~s~~~i~~l~~~~~-----------~I~sv~fspdg~~L~sgs~d-g--~I~IwDl~~~~~~~ 753 (786)
+ .|++||+.+++.. .+..+.. .+..+.|+|+++.|+.++.+ + .|+++|+.++....
T Consensus 319 ~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~~ 389 (396)
T 3c5m_A 319 DPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKHL 389 (396)
T ss_dssp CCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC--
T ss_pred CCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccccc
Confidence 3 7999999887643 3333333 25667899999998888764 4 46666766665543
No 187
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.61 E-value=3.4e-12 Score=133.72 Aligned_cols=270 Identities=7% Similarity=-0.013 Sum_probs=192.0
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeee-ecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTEC-TPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF 585 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~-~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~ 585 (786)
.....+.+++++++|+++++...++.|.+||.. ++... .+..+...+.++++.+++.++++...++.|.+||.. ++.
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 345689999999999988877678999999988 54433 233344679999999999877776667889999987 543
Q ss_pred eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe-e---cCCeEEEEEeCCCCEEEEEECCCeEEEE
Q 044075 586 CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI-S---KGGTVQVRFQPRLGLLLAAASENVVSIF 661 (786)
Q Consensus 586 ~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~-~---~~~i~~i~~sp~g~~Ll~gs~dg~I~iw 661 (786)
...........+.++++.+++. ++++...++.|..||.. ++.... . ...+..+++.++++.+++...++.|.+|
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 2222333446789999998776 55566667899999988 544432 1 2457889999999855555557899999
Q ss_pred EcCCCcEEEE-EecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEE-EccCCCceEEEEEeCCCCEEEEEECC
Q 044075 662 DVETDRLTHS-FKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHE-LSSSGNKFHSCIFHPSYPTLMVIGGY 738 (786)
Q Consensus 662 D~~t~~~i~~-l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~-l~~~~~~I~sv~fspdg~~L~sgs~d 738 (786)
|. +++.... ...+...+.+++++++|.++++...+ .|.+||. +++.... +......+.++++++++..+++...+
T Consensus 173 ~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 173 TN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCC
Confidence 98 5554432 22345678999999999877776655 8999998 5544332 33345678899999999855555456
Q ss_pred CeEEEEECCCCeEEEE--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 739 QSLELWNMAENKCMTI--AAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 739 g~I~IwDl~~~~~~~~--~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
+.|.+||. ++....+ ......+.+++++++|.++++.. . .|..+
T Consensus 251 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~ 296 (300)
T 2qc5_A 251 NQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKL 296 (300)
T ss_dssp TEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEE
T ss_pred CeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEe
Confidence 89999998 4544433 33456789999999998666554 4 55444
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=1.5e-13 Score=142.64 Aligned_cols=237 Identities=12% Similarity=0.018 Sum_probs=169.6
Q ss_pred CeEEEEEcCCCCEEE-EEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 511 KVTCCHFSSDGKLLA-SAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 511 ~V~~lafSpdg~~La-sgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
...+++++++|++++ +...++.|.+|+..+.........+...+.++++.++++++++.. ++.|.+||...... ...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eee
Confidence 688999999999777 446788999999876554433334445788999999998665555 88999999876542 222
Q ss_pred ecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC
Q 044075 590 YTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETD 666 (786)
Q Consensus 590 ~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~ 666 (786)
.......+.++++.+++. ++++...++.|.+|+..+........ ..+..+++++++..+++...++.|.+||....
T Consensus 103 ~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp CCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred ecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 222335789999999876 66576778899999876554332221 35678999999986666566789999999877
Q ss_pred cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEE
Q 044075 667 RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWN 745 (786)
Q Consensus 667 ~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwD 745 (786)
........+...+.+|+++++|.++++...+ .|.+||............+...+.++++++++..+++...++.|++|+
T Consensus 182 ~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 182 NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp CEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred ceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 6554333344678999999999777776666 899999876554332222335689999999999777777889999999
Q ss_pred CCCCe
Q 044075 746 MAENK 750 (786)
Q Consensus 746 l~~~~ 750 (786)
+...+
T Consensus 262 ~~~~~ 266 (270)
T 1rwi_B 262 SLEHH 266 (270)
T ss_dssp CCGGG
T ss_pred CCCcc
Confidence 87643
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.61 E-value=1.3e-12 Score=151.98 Aligned_cols=263 Identities=10% Similarity=0.084 Sum_probs=193.4
Q ss_pred CCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC--CCcceeeeecCCCCC
Q 044075 519 SDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA--KPNFCLQTYTGHNNH 596 (786)
Q Consensus 519 pdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~--s~~~~~~~~~~h~~~ 596 (786)
+.+.++++...++.|.++|..+++.+..+... ..+..+.|+||++++++++.|+.|.+||+. +.+ .+..+.. ...
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~-~v~~i~~-G~~ 241 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT-TVAEIKI-GSE 241 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC-EEEEEEC-CSE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc-EeEEEec-CCC
Confidence 44556777778999999999999998888643 357799999999999999999999999996 554 3444443 234
Q ss_pred eEEEEEe----cCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC--------------CeEEEEEeCCCCEEEEEEC-CCe
Q 044075 597 VMSLDFH----PKKNDLFCSCDGNSEIRFWNLSQYSCARISKG--------------GTVQVRFQPRLGLLLAAAS-ENV 657 (786)
Q Consensus 597 V~sl~~s----p~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~--------------~i~~i~~sp~g~~Ll~gs~-dg~ 657 (786)
...++|+ |+|++++++...++.|.++|..+.+.+....- .+..+..++++..+++... .|.
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 6899999 69999998888899999999999887765431 3456777887766555554 599
Q ss_pred EEEEEcCCCcEE--EEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEcc-----CCCceEEEEEeCC
Q 044075 658 VSIFDVETDRLT--HSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSS-----SGNKFHSCIFHPS 728 (786)
Q Consensus 658 I~iwD~~t~~~i--~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~-----~~~~I~sv~fspd 728 (786)
|.++|..+.+.. ..+. ......++.|+|++++|+++... .|.++|+.+++.+..+.. |.+.... .++|+
T Consensus 322 v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~-~~~p~ 399 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN-FVHPT 399 (567)
T ss_dssp EEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-EEETT
T ss_pred EEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee-eECCC
Confidence 999999876432 2232 45567889999999999887754 899999999998877654 2111112 26888
Q ss_pred CCEEEEEE--CCCeEEEEECCC-------CeEE-EEcccCCCeEEEEEcCCCCEEEEEeC-------CCcEEEeC
Q 044075 729 YPTLMVIG--GYQSLELWNMAE-------NKCM-TIAAHDCVISALAQSPVTGMVASASH-------DKSVKIWK 786 (786)
Q Consensus 729 g~~L~sgs--~dg~I~IwDl~~-------~~~~-~~~~h~~~V~slafspdg~~LaSgs~-------DG~I~IWd 786 (786)
+..+++.+ .++.|.++|... .+.+ .+......-..+.++|++++|++... ...|.|||
T Consensus 400 ~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 400 FGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEE
T ss_pred CCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEE
Confidence 66666554 467999999987 4454 33333333344778999999888663 34788775
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.60 E-value=1.8e-14 Score=171.88 Aligned_cols=245 Identities=12% Similarity=0.053 Sum_probs=168.9
Q ss_pred cCCCCeEEEEEcCCCCEEEEE-----ECCCeEEEEEcCCCeeeeecCCCCCCe--EEEEEccCCCEEEEEeCCCc-----
Q 044075 507 KSSSKVTCCHFSSDGKLLASA-----GHDKKVVVWNMENFQTECTPDDHNHII--TDVRFRPNSTQLATSSFDKT----- 574 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasg-----s~Dg~V~IWdl~t~~~~~~l~~h~~~V--~sl~fspdg~~Lasgs~Dg~----- 574 (786)
+|...+.+++|||||++||.+ +.+..|++||+.+++.+. ..+...+ ..++|+||++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 466679999999999999843 345689999999988651 1121222 68999999999999998876
Q ss_pred --------EEEEcCCCCcc---eeeeecCCCCCeEEEEEecCCCeEEEEEcCC-C--cEEEEeCCCCeeeEee--cCCeE
Q 044075 575 --------VRIWDAAKPNF---CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN-S--EIRFWNLSQYSCARIS--KGGTV 638 (786)
Q Consensus 575 --------I~VWdl~s~~~---~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D-g--~I~iwDl~~~~~~~~~--~~~i~ 638 (786)
|++|++.++.. ++.....|...+.++.|+|+|+.++++...+ + .|++|+..++...... .....
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 275 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKY 275 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCE
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceE
Confidence 99999987652 2223334556789999999999888666543 2 6777776554433332 23445
Q ss_pred EEEEeCCCCEEEEEEC----CCeEEEEEcCCCcE---EEEEecC-CCCEEEEEEcCCCCEEEEEeCC-eEEEEECC-CCe
Q 044075 639 QVRFQPRLGLLLAAAS----ENVVSIFDVETDRL---THSFKGH-STEIHSVCWDTNGEYLASVSQD-SVRVWSLA-SGE 708 (786)
Q Consensus 639 ~i~~sp~g~~Ll~gs~----dg~I~iwD~~t~~~---i~~l~~h-~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~-s~~ 708 (786)
...+ +++. +++.+. ++.|.+||+.++.. ...+..+ ...|..++|+ ++.++++...| ..+||.+. +++
T Consensus 276 ~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~ 352 (695)
T 2bkl_A 276 EVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGK 352 (695)
T ss_dssp EEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred EEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC
Confidence 5555 5666 555554 57899999987652 3333333 4567888988 67777877777 65555443 355
Q ss_pred eEEEEccC-CCceEEEEEeCCCCEEEEEEC----CCeEEEEECCCCeEEEEcc
Q 044075 709 CIHELSSS-GNKFHSCIFHPSYPTLMVIGG----YQSLELWNMAENKCMTIAA 756 (786)
Q Consensus 709 ~i~~l~~~-~~~I~sv~fspdg~~L~sgs~----dg~I~IwDl~~~~~~~~~~ 756 (786)
.+..+..+ ...+..+.++|++..++.... .+.|++||+.+++...+..
T Consensus 353 ~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~ 405 (695)
T 2bkl_A 353 PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAK 405 (695)
T ss_dssp EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEE
T ss_pred eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEec
Confidence 66666554 566778889999887765443 2589999999887654443
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.58 E-value=2.8e-13 Score=140.51 Aligned_cols=231 Identities=7% Similarity=-0.060 Sum_probs=167.1
Q ss_pred CeEEEEEccCCCEEE-EEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE
Q 044075 553 IITDVRFRPNSTQLA-TSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR 631 (786)
Q Consensus 553 ~V~sl~fspdg~~La-sgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~ 631 (786)
...++++++++++++ +...++.|.+||..+... ......+...+.++++.+++. ++++.. ++.|.+||........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT-TVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSNNQTV 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC------EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEEECTTCSCCEE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc-ceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCceEee
Confidence 678999999998666 446788999999866442 222223335688999999877 555655 8899999988765443
Q ss_pred eec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC
Q 044075 632 ISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG 707 (786)
Q Consensus 632 ~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~ 707 (786)
... ..+..+++++++..+++...++.|.+|+..+.............+.+++++++|+++++...+ .|.+||....
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 221 457889999998866666667899999876654433222333467899999999977776655 9999998877
Q ss_pred eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEc-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 708 ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIA-AHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 708 ~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~-~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
............+..+++++++..+++...++.|.+||.......... .+...+.+++++++|.++++...++.|++|+
T Consensus 182 ~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 182 NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp CEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred ceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 654433333367889999999976666556789999999876554433 3346789999999999888888999999985
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.58 E-value=5.4e-13 Score=144.24 Aligned_cols=251 Identities=9% Similarity=0.021 Sum_probs=178.4
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
....++++. +++++++...++.|.+||..+++.+.++.. ......++++++++.+++...++.|.+||+.+.+. ...
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~-~~~ 120 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI-TGY 120 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEE-EEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeE-EEE
Confidence 346777774 345555666679999999999999888853 46789999999885444443899999999998763 333
Q ss_pred ecCCC-----CCeEEEEEecCCCeEEEEEc-CCCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECC------
Q 044075 590 YTGHN-----NHVMSLDFHPKKNDLFCSCD-GNSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASE------ 655 (786)
Q Consensus 590 ~~~h~-----~~V~sl~~sp~g~~ll~sgs-~Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~d------ 655 (786)
+.... .....+++ ++..++++.. .++.|.+||+.+++.+.... .....++++++++.++++..+
T Consensus 121 i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~ 198 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPY 198 (328)
T ss_dssp EECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSS
T ss_pred EEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCcc
Confidence 33221 14566777 4566776665 48899999999988776554 345678899998866665544
Q ss_pred ----CeEEEEEcCCCcEEEEEecC-CCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEE--EccCCCceEEEEEeCC
Q 044075 656 ----NVVSIFDVETDRLTHSFKGH-STEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHE--LSSSGNKFHSCIFHPS 728 (786)
Q Consensus 656 ----g~I~iwD~~t~~~i~~l~~h-~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~--l~~~~~~I~sv~fspd 728 (786)
+.|.++|..+++....+... ......++|+|++++|+++.. .|.+||..+++.... +.........++++|+
T Consensus 199 ~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~ 277 (328)
T 3dsm_A 199 GYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPN 277 (328)
T ss_dssp CBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTT
T ss_pred ccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCCCceeeeeeecCCCCceEEEEEcCC
Confidence 78999999999888776532 346899999999999888765 899999988775321 1112456889999995
Q ss_pred CCEEEEEE-----CCCeEEEEECCCCeEEEEcccCCCeEEEEEc
Q 044075 729 YPTLMVIG-----GYQSLELWNMAENKCMTIAAHDCVISALAQS 767 (786)
Q Consensus 729 g~~L~sgs-----~dg~I~IwDl~~~~~~~~~~h~~~V~slafs 767 (786)
+..|+++. .++.|.+||.. ++.+....-...-..++|-
T Consensus 278 ~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P~~~~~~ 320 (328)
T 3dsm_A 278 NGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIPGAFCWK 320 (328)
T ss_dssp TCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESEEEEEEE
T ss_pred CCeEEEEcccccccCCEEEEECCC-CCEEEEEEeccCcceEEEe
Confidence 55555554 56799999998 6665433333344555553
No 193
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.57 E-value=4.1e-13 Score=160.50 Aligned_cols=265 Identities=8% Similarity=-0.023 Sum_probs=181.2
Q ss_pred CCCCEEEEEECCC-----eEEEEEcCCCeeeeec------CCCCCCeEEEEEccCCCEEEEEeCCC-----cEEEEcCCC
Q 044075 519 SDGKLLASAGHDK-----KVVVWNMENFQTECTP------DDHNHIITDVRFRPNSTQLATSSFDK-----TVRIWDAAK 582 (786)
Q Consensus 519 pdg~~Lasgs~Dg-----~V~IWdl~t~~~~~~l------~~h~~~V~sl~fspdg~~Lasgs~Dg-----~I~VWdl~s 582 (786)
|+|++++....++ .|.+.+...++....+ .+|...+..++|+|||++|+.+..++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 8888877655332 3444444444332221 23555789999999999998776543 899999998
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC---------------cEEEEeCCCCee--eEeec-----CCeEEE
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS---------------EIRFWNLSQYSC--ARISK-----GGTVQV 640 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg---------------~I~iwDl~~~~~--~~~~~-----~~i~~i 640 (786)
++.....+.. ..+.+++|+|+++.++++..... .|++|++.+... ..+.. .....+
T Consensus 161 g~~~~~~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 161 AKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA 238 (710)
T ss_dssp TEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCcccccC--cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEE
Confidence 7743222322 23678999999998886654322 299999987652 12222 235789
Q ss_pred EEeCCCCEEEEEEC-----CCeEEEEEcCC------Cc-EEEEEecCCCCEEEEEEcCCCCEEEEEeCC-----eEEEEE
Q 044075 641 RFQPRLGLLLAAAS-----ENVVSIFDVET------DR-LTHSFKGHSTEIHSVCWDTNGEYLASVSQD-----SVRVWS 703 (786)
Q Consensus 641 ~~sp~g~~Ll~gs~-----dg~I~iwD~~t------~~-~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-----~I~vwD 703 (786)
.|+|++++|+.++. +..|++||+.+ +. ....+..+...+.. .|+++|+.|+..+.. .|.+||
T Consensus 239 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d 317 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID 317 (710)
T ss_dssp EECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence 99999999988875 56899999986 42 34556656666655 488999888776643 599999
Q ss_pred CCCCe--eEEEEccCCC--ceEEEEEeCCCCEEEEEECCC--eEEEEECCCCeE-EEEcccCCCeEEEEEcCCCCEEEEE
Q 044075 704 LASGE--CIHELSSSGN--KFHSCIFHPSYPTLMVIGGYQ--SLELWNMAENKC-MTIAAHDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 704 l~s~~--~i~~l~~~~~--~I~sv~fspdg~~L~sgs~dg--~I~IwDl~~~~~-~~~~~h~~~V~slafspdg~~LaSg 776 (786)
+.++. ....+..+.. .+..+.|++++..+++...++ .|++||+.+++. ..+..+...|..++++|++..|+..
T Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 318 FTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp TTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEE
T ss_pred CCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEE
Confidence 98764 2344444433 678899997777778888787 567788866654 4566677789999999998755533
Q ss_pred -eC---CCcEEEeC
Q 044075 777 -SH---DKSVKIWK 786 (786)
Q Consensus 777 -s~---DG~I~IWd 786 (786)
+. .+.|.+||
T Consensus 398 ~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 398 FTSFLSPGIIYHCD 411 (710)
T ss_dssp EECSSCCCEEEEEE
T ss_pred EeCCCCCCEEEEEE
Confidence 32 35677774
No 194
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.57 E-value=8.4e-12 Score=137.69 Aligned_cols=264 Identities=7% Similarity=-0.028 Sum_probs=183.1
Q ss_pred EcCCCCEEEEEEC--CC---eEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe----------CCCcEEEEcCC
Q 044075 517 FSSDGKLLASAGH--DK---KVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS----------FDKTVRIWDAA 581 (786)
Q Consensus 517 fSpdg~~Lasgs~--Dg---~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs----------~Dg~I~VWdl~ 581 (786)
..|+++++++... .. .|.+||..+++.+..+.....+ .++|+||+++|+++. .++.|.+||..
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 3467777776643 22 8899999999988887654444 999999999999886 36789999998
Q ss_pred CCcceeeeecCC-------CCCeEEEEEecCCCeEEEEEcC-CCcEEEEeCCCCeeeEe-ecCCeEEEEEeCCC-CEEEE
Q 044075 582 KPNFCLQTYTGH-------NNHVMSLDFHPKKNDLFCSCDG-NSEIRFWNLSQYSCARI-SKGGTVQVRFQPRL-GLLLA 651 (786)
Q Consensus 582 s~~~~~~~~~~h-------~~~V~sl~~sp~g~~ll~sgs~-Dg~I~iwDl~~~~~~~~-~~~~i~~i~~sp~g-~~Ll~ 651 (786)
+.+. +..+.-. ......+.|+|++++++++... ++.|.++| .+++.+.. ..... ++.+.+++ ..+++
T Consensus 106 t~~~-~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-~~~~~~~~~~~~~~ 182 (373)
T 2mad_H 106 TFLP-IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-CYHIHPGAPSTFYL 182 (373)
T ss_pred CCcE-EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-eEEEEeCCCceEEE
Confidence 7663 3322211 1235689999999999877654 68899999 98887766 54322 24555555 45666
Q ss_pred EECCCeEEEEEcCCCcEEEEEe-----cCCCCE-EEEEEcCCCCEEEEEeCC-eEEEEECCCCe--eEEEEccC------
Q 044075 652 AASENVVSIFDVETDRLTHSFK-----GHSTEI-HSVCWDTNGEYLASVSQD-SVRVWSLASGE--CIHELSSS------ 716 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~l~-----~h~~~I-~sv~~spdg~~Lasgs~D-~I~vwDl~s~~--~i~~l~~~------ 716 (786)
.+.||.+.++|. +++.+.... ....++ ....+.+++..++..+.+ .+.+.|+.... .+..+...
T Consensus 183 ~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~ 261 (373)
T 2mad_H 183 LCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKA 261 (373)
T ss_pred EcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccc
Confidence 778999999999 877663322 111221 234556655444333344 89999997652 23333211
Q ss_pred ----CCceEEEEEeCCCCEEEEEEC----------CCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCC-EEEEEe-CCC
Q 044075 717 ----GNKFHSCIFHPSYPTLMVIGG----------YQSLELWNMAENKCMTIAAHDCVISALAQSPVTG-MVASAS-HDK 780 (786)
Q Consensus 717 ----~~~I~sv~fspdg~~L~sgs~----------dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~-~LaSgs-~DG 780 (786)
......+.++|+++.+++... .+.|.++|+.+++.+..........+++|+||++ +++++. .++
T Consensus 262 ~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~ 341 (373)
T 2mad_H 262 DTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTE 341 (373)
T ss_pred cceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCC
Confidence 122445789999998888754 3579999999999875555556799999999999 788877 489
Q ss_pred cEEEeC
Q 044075 781 SVKIWK 786 (786)
Q Consensus 781 ~I~IWd 786 (786)
.|.|||
T Consensus 342 ~V~ViD 347 (373)
T 2mad_H 342 VLHIYD 347 (373)
T ss_pred eEEEEE
Confidence 999986
No 195
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.55 E-value=8.9e-13 Score=145.05 Aligned_cols=269 Identities=9% Similarity=0.052 Sum_probs=190.5
Q ss_pred EEEcCCCCEEEEEEC-----CCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe----------CCCcEEEEc
Q 044075 515 CHFSSDGKLLASAGH-----DKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS----------FDKTVRIWD 579 (786)
Q Consensus 515 lafSpdg~~Lasgs~-----Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs----------~Dg~I~VWd 579 (786)
....|+++.+++... ++.|.++|..+++.+..+..-..+ . +.++||++++++++ .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 345688988888765 679999999999999888655555 4 99999999888775 367899999
Q ss_pred CCCCcceeeeec-CC------CCCeEEEEEecCCCeEEEEEc-CCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEE
Q 044075 580 AAKPNFCLQTYT-GH------NNHVMSLDFHPKKNDLFCSCD-GNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLA 651 (786)
Q Consensus 580 l~s~~~~~~~~~-~h------~~~V~sl~~sp~g~~ll~sgs-~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~ 651 (786)
..+.+. +..+. +. ......+.|+|+|++++++.. .++.|.++|+.+.+.+..+.-.-....+....+.+++
T Consensus 116 ~~t~~v-~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~ 194 (386)
T 3sjl_D 116 PVTLLP-TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFM 194 (386)
T ss_dssp TTTCCE-EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEE
T ss_pred CCCCeE-EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEE
Confidence 999774 33332 21 124667999999999987765 3789999999999988776533222334334567788
Q ss_pred EECCCeEEEEEcCC-CcEEEEEecC----CCCEE-EEEEc-CCCCEEEEEeCCeEEEEECCCCe--eEEEEcc-------
Q 044075 652 AASENVVSIFDVET-DRLTHSFKGH----STEIH-SVCWD-TNGEYLASVSQDSVRVWSLASGE--CIHELSS------- 715 (786)
Q Consensus 652 gs~dg~I~iwD~~t-~~~i~~l~~h----~~~I~-sv~~s-pdg~~Lasgs~D~I~vwDl~s~~--~i~~l~~------- 715 (786)
.+.||.+.++++.+ ++.......+ ...+. ...|. ++|+++++...+.|.++|+.+.. .+..+..
T Consensus 195 ~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp EETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred ECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccccc
Confidence 88999999999986 5543322111 12222 24554 67876665554499999997653 3333320
Q ss_pred ---CCCceEEEEEeCCCCEEEEEEC----------CCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCC-EEEEEe-CCC
Q 044075 716 ---SGNKFHSCIFHPSYPTLMVIGG----------YQSLELWNMAENKCMTIAAHDCVISALAQSPVTG-MVASAS-HDK 780 (786)
Q Consensus 716 ---~~~~I~sv~fspdg~~L~sgs~----------dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~-~LaSgs-~DG 780 (786)
....+..++++++++.+++... .+.|.++|+.+++.+....-...+++|+|++|++ +|+++. .++
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~ 354 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDK 354 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTT
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCC
Confidence 0123335778999998888753 2479999999999886555555789999999997 666654 588
Q ss_pred cEEEeC
Q 044075 781 SVKIWK 786 (786)
Q Consensus 781 ~I~IWd 786 (786)
.|.|+|
T Consensus 355 ~VsViD 360 (386)
T 3sjl_D 355 TLYIHD 360 (386)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 999886
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.54 E-value=4.9e-12 Score=133.95 Aligned_cols=238 Identities=9% Similarity=0.092 Sum_probs=169.5
Q ss_pred ecCCCCeEEEEEcCCCCEEEE-------EECCCeEEEEEcCCCeeeeecC----CCCCCeEEEEEccC-CCEEEEEeCCC
Q 044075 506 RKSSSKVTCCHFSSDGKLLAS-------AGHDKKVVVWNMENFQTECTPD----DHNHIITDVRFRPN-STQLATSSFDK 573 (786)
Q Consensus 506 ~~H~~~V~~lafSpdg~~Las-------gs~Dg~V~IWdl~t~~~~~~l~----~h~~~V~sl~fspd-g~~Lasgs~Dg 573 (786)
...-....+++|+++|.++++ +..++.|.+||..+++...... ++...+.+++++++ ++++ +++.+.
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~-v~~~~~ 92 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLF-VADMRL 92 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEE-EEETTT
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEE-EEECCC
Confidence 334456789999999988887 5778999999988776543322 24567899999999 6544 444455
Q ss_pred cEEEEcCCCCcceeee-ecC----CCCCeEEEEEecCCCeEEEEEcCC---------------CcEEEEeCCCCeeeEee
Q 044075 574 TVRIWDAAKPNFCLQT-YTG----HNNHVMSLDFHPKKNDLFCSCDGN---------------SEIRFWNLSQYSCARIS 633 (786)
Q Consensus 574 ~I~VWdl~s~~~~~~~-~~~----h~~~V~sl~~sp~g~~ll~sgs~D---------------g~I~iwDl~~~~~~~~~ 633 (786)
.|.+||.. ++. ... ... ....+.++++++++..++ +...+ +.|..||.. ++.....
T Consensus 93 ~l~~~d~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 93 GLLVVQTD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWI-TAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp EEEEEETT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEE-EECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred CEEEEeCC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEE-EecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 79999987 542 222 111 124588999999886544 54444 578888776 4443322
Q ss_pred --cCCeEEEEEe----CCCCEEEEEE-CCCeEEEEEcC-CCc-----EEEEEecCC-CCEEEEEEcCCCCEEEEEeCC-e
Q 044075 634 --KGGTVQVRFQ----PRLGLLLAAA-SENVVSIFDVE-TDR-----LTHSFKGHS-TEIHSVCWDTNGEYLASVSQD-S 698 (786)
Q Consensus 634 --~~~i~~i~~s----p~g~~Ll~gs-~dg~I~iwD~~-t~~-----~i~~l~~h~-~~I~sv~~spdg~~Lasgs~D-~ 698 (786)
......++++ ++++.++++. .++.|.+||.. +++ ....+..+. ..+..++++++|.++++...+ .
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 2456788999 9987776665 57899999986 443 222333333 568899999999988887766 9
Q ss_pred EEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEEC-CCeEEEEECCC
Q 044075 699 VRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGG-YQSLELWNMAE 748 (786)
Q Consensus 699 I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl~~ 748 (786)
|.+||..+++.+..+..+...+.+++|++++..|++++. ++.|..|++..
T Consensus 249 i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 999999877776677666678999999999996666654 57899999864
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.52 E-value=4.8e-12 Score=133.62 Aligned_cols=210 Identities=13% Similarity=0.068 Sum_probs=166.4
Q ss_pred CCCEEEEEECCCeEEEEEcCCCeeeeecCCCC-CCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCC-CCCe
Q 044075 520 DGKLLASAGHDKKVVVWNMENFQTECTPDDHN-HIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGH-NNHV 597 (786)
Q Consensus 520 dg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~-~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h-~~~V 597 (786)
.+++|++++.|+.|.+||.++++.+..+..+. ..+.++.++|+|++|+ +.++.|..||. +++ .+..+..+ ...+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~-~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR-ELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC-EEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC-EEEEEcCCCCccc
Confidence 46789999999999999999999999998776 5789999999999888 45788999999 666 45556554 3578
Q ss_pred EEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---------CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcE
Q 044075 598 MSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---------GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRL 668 (786)
Q Consensus 598 ~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---------~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~ 668 (786)
.++.+.++++.+++.++.++.|..+|. .++.+..+. .....+++.++++++++...++.|.+||.+ ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 899999999877754443778888886 444443332 123346788999999999999999999998 999
Q ss_pred EEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCC------CceEEEEEeCCCCEEEEEE
Q 044075 669 THSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSG------NKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 669 i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~------~~I~sv~fspdg~~L~sgs 736 (786)
+.++... ..+.++.+.++|.++++++.+ .|..+|..+++.+.++.... ..+..+...+++..+++..
T Consensus 158 ~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 158 LNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 9988854 456678888999999998888 89999999999999986432 2377888899998777764
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.51 E-value=6.3e-13 Score=158.52 Aligned_cols=263 Identities=9% Similarity=-0.022 Sum_probs=171.6
Q ss_pred cCCCCEEEEEECCC-----eEEEEEcCCCeeeeec------CCCCCCeEEEEEccCCCEEEEE-----eCCCcEEEEcCC
Q 044075 518 SSDGKLLASAGHDK-----KVVVWNMENFQTECTP------DDHNHIITDVRFRPNSTQLATS-----SFDKTVRIWDAA 581 (786)
Q Consensus 518 Spdg~~Lasgs~Dg-----~V~IWdl~t~~~~~~l------~~h~~~V~sl~fspdg~~Lasg-----s~Dg~I~VWdl~ 581 (786)
+|+|++++....++ .|.+.+...++....+ .+|...+.+++|+|||++|+.+ +.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 37888888776543 3444454444333222 2466679999999999998844 345689999999
Q ss_pred CCcce-eeeecCCCCCeEEEEEecCCCeEEEEEcCCCc-------------EEEEeCCCCee--eEeec-----CCeEEE
Q 044075 582 KPNFC-LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSE-------------IRFWNLSQYSC--ARISK-----GGTVQV 640 (786)
Q Consensus 582 s~~~~-~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~-------------I~iwDl~~~~~--~~~~~-----~~i~~i 640 (786)
+++.. ...+.. ....+++|+|+++.++++.. |.. |++|++.+... ..+.. ..+..+
T Consensus 156 tg~~~~~~~~~~--~~~~~~~wspDg~~l~~~~~-d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~ 232 (695)
T 2bkl_A 156 SGEWSKVDVIEG--GKYATPKWTPDSKGFYYEWL-PTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQS 232 (695)
T ss_dssp TCCBCSSCCBSC--CTTCCCEECTTSSEEEEEEC-CCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEE
T ss_pred CCCCcCCcccCc--ccccceEEecCCCEEEEEEe-cCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEE
Confidence 87742 111221 11268999999998875544 443 99999987652 22222 356789
Q ss_pred EEeCCCCEEEEEECCC----eEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEe---CC-eEEEEECCCCee---
Q 044075 641 RFQPRLGLLLAAASEN----VVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVS---QD-SVRVWSLASGEC--- 709 (786)
Q Consensus 641 ~~sp~g~~Ll~gs~dg----~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs---~D-~I~vwDl~s~~~--- 709 (786)
.|+|+|++|++++.++ .|+++|..++... .+..+...+....| ++|.+++... .+ .|.+||+.++..
T Consensus 233 ~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 310 (695)
T 2bkl_A 233 DLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASW 310 (695)
T ss_dssp EECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGC
T ss_pred EECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-EeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCC
Confidence 9999999998888766 6777776655443 34445556666666 5666444433 24 799999987653
Q ss_pred EEEEccC-CCceEEEEEeCCCCEEEEEECCCeEEEEE--CCCCeEEEEccc-CCCeEEEEEcCCCCEEEEEe----CCCc
Q 044075 710 IHELSSS-GNKFHSCIFHPSYPTLMVIGGYQSLELWN--MAENKCMTIAAH-DCVISALAQSPVTGMVASAS----HDKS 781 (786)
Q Consensus 710 i~~l~~~-~~~I~sv~fspdg~~L~sgs~dg~I~IwD--l~~~~~~~~~~h-~~~V~slafspdg~~LaSgs----~DG~ 781 (786)
...+..+ ...+..++|+ ++..+++...++..+||. +..+....+..+ ...|..++++|++..|+... ..+.
T Consensus 311 ~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 389 (695)
T 2bkl_A 311 KEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQ 389 (695)
T ss_dssp EEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEE
T ss_pred eEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence 3333333 4567888888 667778888888766664 444334444444 66788899999988666322 2467
Q ss_pred EEEeC
Q 044075 782 VKIWK 786 (786)
Q Consensus 782 I~IWd 786 (786)
|++||
T Consensus 390 v~~~d 394 (695)
T 2bkl_A 390 IYKTS 394 (695)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88775
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.50 E-value=4.3e-11 Score=131.97 Aligned_cols=233 Identities=11% Similarity=0.054 Sum_probs=169.5
Q ss_pred EEEEcCCCCEEEEEE----------CCCeEEEEEcCCCeeeeecCCC-------CCCeEEEEEccCCCEEEEEeC--CCc
Q 044075 514 CCHFSSDGKLLASAG----------HDKKVVVWNMENFQTECTPDDH-------NHIITDVRFRPNSTQLATSSF--DKT 574 (786)
Q Consensus 514 ~lafSpdg~~Lasgs----------~Dg~V~IWdl~t~~~~~~l~~h-------~~~V~sl~fspdg~~Lasgs~--Dg~ 574 (786)
.++|+|||++|+++. .++.|.+||..+.+.+..+... ......+.|+||+++|++++. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999999886 3678999999998887766322 123458999999999999874 478
Q ss_pred EEEEcCCCCcceeee-ecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--------CC-eEEEEEeC
Q 044075 575 VRIWDAAKPNFCLQT-YTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--------GG-TVQVRFQP 644 (786)
Q Consensus 575 I~VWdl~s~~~~~~~-~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--------~~-i~~i~~sp 644 (786)
|.++| .+++. +.. +.. . .|+.+.|+++..+++.+.||.+.++|. +++...... .. .....+.+
T Consensus 150 v~viD-~t~~~-~~~~i~~-~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 150 VGLVV-QGGSS-DDQLLSS-P---TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred EEEEE-CCCCE-EeEEcCC-C---ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe
Confidence 99999 87763 444 321 1 235667788777778888999999999 766553211 11 12235666
Q ss_pred CCCEEEEEECCCeEEEEEcCCCc--EEEEEec----------CCCCEEEEEEcCCCCEEEEEeC-----------CeEEE
Q 044075 645 RLGLLLAAASENVVSIFDVETDR--LTHSFKG----------HSTEIHSVCWDTNGEYLASVSQ-----------DSVRV 701 (786)
Q Consensus 645 ~g~~Ll~gs~dg~I~iwD~~t~~--~i~~l~~----------h~~~I~sv~~spdg~~Lasgs~-----------D~I~v 701 (786)
++..++..+.++.+.++|+.... .+..+.. .......+.++++++.+++... +.|.+
T Consensus 223 ~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V 302 (373)
T 2mad_H 223 KSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred cCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEE
Confidence 66666666678899999997652 2333321 1122445788999988777643 27999
Q ss_pred EECCCCeeEEEEccCCCceEEEEEeCCCC-EEEEEE-CCCeEEEEECCCCeEEEE
Q 044075 702 WSLASGECIHELSSSGNKFHSCIFHPSYP-TLMVIG-GYQSLELWNMAENKCMTI 754 (786)
Q Consensus 702 wDl~s~~~i~~l~~~~~~I~sv~fspdg~-~L~sgs-~dg~I~IwDl~~~~~~~~ 754 (786)
+|+.+++.+.++.. ......+.|+|+++ .++++. .++.|.+||+.+++.+..
T Consensus 303 ID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 303 VTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred EECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 99999999998854 34688999999999 677766 488999999999988754
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.50 E-value=3.8e-11 Score=125.61 Aligned_cols=232 Identities=5% Similarity=-0.001 Sum_probs=168.5
Q ss_pred CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe
Q 044075 549 DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS 628 (786)
Q Consensus 549 ~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~ 628 (786)
.+...+.++++.++++++++...++.|.+||.. +.........+...+.++++.+++. ++++...++.|..||... +
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~ 88 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-VWFTENAANKIGRITKKG-I 88 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTS-C
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-EEEeCCCCCeEEEECCCC-c
Confidence 445679999999999877766668899999988 5422222233457799999998876 554666688899999873 3
Q ss_pred eeEee----cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEE-EecCCCCEEEEEEcCCCCEEEEEeCC-eEEEE
Q 044075 629 CARIS----KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHS-FKGHSTEIHSVCWDTNGEYLASVSQD-SVRVW 702 (786)
Q Consensus 629 ~~~~~----~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~-l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vw 702 (786)
..... ...+..+++.+++..+++...++.|.+||. +++.... ...+...+.+++++++|+++++...+ .|.+|
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 167 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRI 167 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEE
Confidence 22221 235778999999887777667889999998 5544332 23345678999999999888877665 89999
Q ss_pred ECCCCeeEEE-EccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEE--cccCCCeEEEEEcCCCCEEEEEeCC
Q 044075 703 SLASGECIHE-LSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTI--AAHDCVISALAQSPVTGMVASASHD 779 (786)
Q Consensus 703 Dl~s~~~i~~-l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~--~~h~~~V~slafspdg~~LaSgs~D 779 (786)
|. +++.... +......+..+++++++..+++...++.|.+||. ++....+ ..+...+.+++++++|.++++...+
T Consensus 168 ~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 168 TE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred cC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCC
Confidence 99 6655432 3334456889999999986655556789999999 6665433 3355789999999999877766567
Q ss_pred CcEEEeC
Q 044075 780 KSVKIWK 786 (786)
Q Consensus 780 G~I~IWd 786 (786)
+.|.+||
T Consensus 246 ~~i~~~d 252 (299)
T 2z2n_A 246 NKIGRLT 252 (299)
T ss_dssp TEEEEEE
T ss_pred ceEEEEC
Confidence 7888774
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=1.4e-12 Score=156.82 Aligned_cols=242 Identities=12% Similarity=0.077 Sum_probs=165.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEECC-----CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCc--------
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHD-----KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKT-------- 574 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~D-----g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~-------- 574 (786)
|...+..++|||||++||.+..+ ..|++||+.+++.+... .+...+..++|+|| +.|+.++.|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44468899999999999887654 46999999998875532 12222357899999 99988887654
Q ss_pred ------EEEEcCCCCcce-eeee--cCCCCCeEEEEEecCCCeEEEEEcC----CCcEEEEeCCCC--e-eeEeec--CC
Q 044075 575 ------VRIWDAAKPNFC-LQTY--TGHNNHVMSLDFHPKKNDLFCSCDG----NSEIRFWNLSQY--S-CARISK--GG 636 (786)
Q Consensus 575 ------I~VWdl~s~~~~-~~~~--~~h~~~V~sl~~sp~g~~ll~sgs~----Dg~I~iwDl~~~--~-~~~~~~--~~ 636 (786)
|++|++.++... ...+ ..+...+.++.|+|+|+.+++++.. ...|++||+.++ . ...... ..
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 899999776521 1222 2333468899999999988876642 348999999776 3 333222 23
Q ss_pred eEEEEEeCCCCEEEEEECC----CeEEEEEcCCC--cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEE--EEECCCC
Q 044075 637 TVQVRFQPRLGLLLAAASE----NVVSIFDVETD--RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVR--VWSLASG 707 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~d----g~I~iwD~~t~--~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~--vwDl~s~ 707 (786)
.... +.++++.|+..+.+ +.|.+||+.++ .....+..+...+..++|+ ++.++++...+ ..+ ++++ ++
T Consensus 319 ~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~-~g 395 (741)
T 1yr2_A 319 QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDL-DG 395 (741)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEET-TS
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC-CC
Confidence 3333 45889998888764 45999999874 3344444455556678887 55667777766 544 4554 45
Q ss_pred eeEEEEccC-CCceEEEEEeCCCCEEEEEEC----CCeEEEEECCCCeEEEE
Q 044075 708 ECIHELSSS-GNKFHSCIFHPSYPTLMVIGG----YQSLELWNMAENKCMTI 754 (786)
Q Consensus 708 ~~i~~l~~~-~~~I~sv~fspdg~~L~sgs~----dg~I~IwDl~~~~~~~~ 754 (786)
..+..+..+ ...+..+.++|++..|+.... .+.|++||+.+++...+
T Consensus 396 ~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 396 KPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp CEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred CceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 566666543 567888999999876654432 25899999998875444
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.48 E-value=1.4e-11 Score=130.51 Aligned_cols=232 Identities=11% Similarity=0.039 Sum_probs=161.4
Q ss_pred CCCeEEEEEccCCCEEEE-------EeCCCcEEEEcCCCCcceeeee---cCCCCCeEEEEEecCCCeEEEEEcCCCcEE
Q 044075 551 NHIITDVRFRPNSTQLAT-------SSFDKTVRIWDAAKPNFCLQTY---TGHNNHVMSLDFHPKKNDLFCSCDGNSEIR 620 (786)
Q Consensus 551 ~~~V~sl~fspdg~~Las-------gs~Dg~I~VWdl~s~~~~~~~~---~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~ 620 (786)
-....+++|++++.++++ +..++.|.+||..+++...... .++...+.++++++++..++++.. ++.|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEE
Confidence 345689999999987777 5678899999987766321111 124467899999998344554544 44799
Q ss_pred EEeCCCCeeeEe-ec-------CCeEEEEEeCCCCEEEEEECC---------------CeEEEEEcCCCcEEEEEecCCC
Q 044075 621 FWNLSQYSCARI-SK-------GGTVQVRFQPRLGLLLAAASE---------------NVVSIFDVETDRLTHSFKGHST 677 (786)
Q Consensus 621 iwDl~~~~~~~~-~~-------~~i~~i~~sp~g~~Ll~gs~d---------------g~I~iwD~~t~~~i~~l~~h~~ 677 (786)
+||.. ++.... .. ..+..+++++++..+++...+ +.|..||.. ++...... +..
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-~~~ 172 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-AFQ 172 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-EES
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-CCC
Confidence 99998 665443 21 236789999999877766554 567888776 54433322 344
Q ss_pred CEEEEEEc----CCCCEEEEEe-CC-eEEEEECC-CCe-----eEEEEccCC-CceEEEEEeCCCCEEEEEECCCeEEEE
Q 044075 678 EIHSVCWD----TNGEYLASVS-QD-SVRVWSLA-SGE-----CIHELSSSG-NKFHSCIFHPSYPTLMVIGGYQSLELW 744 (786)
Q Consensus 678 ~I~sv~~s----pdg~~Lasgs-~D-~I~vwDl~-s~~-----~i~~l~~~~-~~I~sv~fspdg~~L~sgs~dg~I~Iw 744 (786)
....++|+ ++++.|+++. .+ .|.+||+. +++ ....+..+. ..+..+++++++..+++...++.|.+|
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 57889999 9997665554 44 89999986 443 222333333 567889999999988887788999999
Q ss_pred ECCCCeEE-EEcccCCCeEEEEEcCCCCEEEE-EeCCCcEEEeC
Q 044075 745 NMAENKCM-TIAAHDCVISALAQSPVTGMVAS-ASHDKSVKIWK 786 (786)
Q Consensus 745 Dl~~~~~~-~~~~h~~~V~slafspdg~~LaS-gs~DG~I~IWd 786 (786)
|..+++.+ .+..+...+.+++|+++++.|+. ...++.|.+|+
T Consensus 253 d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 253 GPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp CTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEe
Confidence 99865543 44455678999999999995554 44567777764
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.45 E-value=4.4e-12 Score=152.41 Aligned_cols=263 Identities=12% Similarity=0.036 Sum_probs=169.9
Q ss_pred CCCCEEEEEECCCe---EEEEE--cC---CCeeeee------cCCCCCCeEEEEEccCCCEEEEEeCC-----CcEEEEc
Q 044075 519 SDGKLLASAGHDKK---VVVWN--ME---NFQTECT------PDDHNHIITDVRFRPNSTQLATSSFD-----KTVRIWD 579 (786)
Q Consensus 519 pdg~~Lasgs~Dg~---V~IWd--l~---t~~~~~~------l~~h~~~V~sl~fspdg~~Lasgs~D-----g~I~VWd 579 (786)
|+|++++....++. -.||. .. .++.... -.+|...+..++|+|||++|+.++.+ ..|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 88998887665433 44554 33 3332221 12344578899999999999887654 4699999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC-------------cEEEEeCCCCee--eEeec--C---CeEE
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS-------------EIRFWNLSQYSC--ARISK--G---GTVQ 639 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg-------------~I~iwDl~~~~~--~~~~~--~---~i~~ 639 (786)
+.+++...... +...+..++|+|+ +.++++...+. .|++|++.+... ..+.. . .+..
T Consensus 196 l~tg~~~~~~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 196 VADGKPLADEL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp TTTCCEEEEEE--EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred CCCCCCCCccC--CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 99887422211 1222367899999 87776654322 389999976542 22222 2 3678
Q ss_pred EEEeCCCCEEEEEECCC-----eEEEEEcCCC--cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-----eEEEEECCCC
Q 044075 640 VRFQPRLGLLLAAASEN-----VVSIFDVETD--RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-----SVRVWSLASG 707 (786)
Q Consensus 640 i~~sp~g~~Ll~gs~dg-----~I~iwD~~t~--~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-----~I~vwDl~s~ 707 (786)
+.|+|+|++|+..+.++ .|++||+.++ +....+..+...+.... +++|+.|+..+.+ .|.+||+.++
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 99999999988887654 8999999877 31445555555555554 4889888877753 5999999875
Q ss_pred --eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEE--ECCCCeEEEEcc-cCCCeEEEEEcCCCCEEE-EEe---C
Q 044075 708 --ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELW--NMAENKCMTIAA-HDCVISALAQSPVTGMVA-SAS---H 778 (786)
Q Consensus 708 --~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~Iw--Dl~~~~~~~~~~-h~~~V~slafspdg~~La-Sgs---~ 778 (786)
.....+..+...+..+.++ ++..+++...++..+|| ++..+....+.. +...|..++++|++..|+ +.+ .
T Consensus 352 ~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~ 430 (741)
T 1yr2_A 352 TPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQ 430 (741)
T ss_dssp SCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTE
T ss_pred ccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCC
Confidence 3333444444556677787 55667777778865555 554443444443 467789999999988555 322 2
Q ss_pred CCcEEEeC
Q 044075 779 DKSVKIWK 786 (786)
Q Consensus 779 DG~I~IWd 786 (786)
.+.|.+||
T Consensus 431 P~~i~~~d 438 (741)
T 1yr2_A 431 PATVLALD 438 (741)
T ss_dssp EEEEEEEE
T ss_pred CCEEEEEE
Confidence 36777775
No 204
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.45 E-value=1.3e-11 Score=135.83 Aligned_cols=262 Identities=10% Similarity=0.068 Sum_probs=179.9
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEE----------CCCeEEEEEcCCCeeeeecCCC-------CCCeEEEEEcc
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAG----------HDKKVVVWNMENFQTECTPDDH-------NHIITDVRFRP 561 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs----------~Dg~V~IWdl~t~~~~~~l~~h-------~~~V~sl~fsp 561 (786)
++.+.++..-..+ . ++++|||++|+++. .++.|.+||..+++.+..+.-. ......+.|+|
T Consensus 69 ~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp 146 (386)
T 3sjl_D 69 GRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP 146 (386)
T ss_dssp TEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT
T ss_pred CeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC
Confidence 3445555544444 3 99999999988775 3678999999999988877421 12456799999
Q ss_pred CCCEEEEEeC--CCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC-CeeeEeec----
Q 044075 562 NSTQLATSSF--DKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ-YSCARISK---- 634 (786)
Q Consensus 562 dg~~Lasgs~--Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~-~~~~~~~~---- 634 (786)
||++++++.. ++.|.|+|+.+.+. +..+.-. + |..+.|.+...+++.+.||.+.+.++.. ++......
T Consensus 147 DGk~lyVan~~~~~~VsVID~~t~~v-v~tI~v~-g---~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~ 221 (386)
T 3sjl_D 147 DGKTLLFYQFSPAPAVGVVDLEGKAF-KRMLDVP-D---CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH 221 (386)
T ss_dssp TSSEEEEEECSSSCEEEEEETTTTEE-EEEEECC-S---EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS
T ss_pred CCCEEEEEEcCCCCeEEEEECCCCcE-EEEEECC-C---cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceec
Confidence 9999998875 68999999999873 4444321 1 1223455555555777799999999876 44322111
Q ss_pred ---CCe-EEEEEe-CCCCEEEEEECCCeEEEEEcCCCc--EEEEEe---------c-CCCCEEEEEEcCCCCEEEEEeC-
Q 044075 635 ---GGT-VQVRFQ-PRLGLLLAAASENVVSIFDVETDR--LTHSFK---------G-HSTEIHSVCWDTNGEYLASVSQ- 696 (786)
Q Consensus 635 ---~~i-~~i~~s-p~g~~Ll~gs~dg~I~iwD~~t~~--~i~~l~---------~-h~~~I~sv~~spdg~~Lasgs~- 696 (786)
..+ ....|. ++| .++..+.+|.|+++|+.+.. .+..+. + ....+..++++++++.+++...
T Consensus 222 ~~~~~~~~~~~~~~~dG-~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~ 300 (386)
T 3sjl_D 222 PEDEFLINHPAYSQKAG-RLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQ 300 (386)
T ss_dssp CTTSCBCSCCEEETTTT-EEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEE
T ss_pred cccccccccceeEcCCC-cEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEecc
Confidence 111 113554 455 44456778999999997664 333232 0 1122334777899988877642
Q ss_pred ---------C-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCC-EEEEEEC-CCeEEEEECCCCeEEEEcccCCCeEEE
Q 044075 697 ---------D-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYP-TLMVIGG-YQSLELWNMAENKCMTIAAHDCVISAL 764 (786)
Q Consensus 697 ---------D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~-~L~sgs~-dg~I~IwDl~~~~~~~~~~h~~~V~sl 764 (786)
. .|.++|+.+++.+.++... ..+..|.++++++ +|+++.. ++.|.++|..+++.+......+.-..|
T Consensus 301 ~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l 379 (386)
T 3sjl_D 301 RDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQV 379 (386)
T ss_dssp CCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCE
T ss_pred ccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCcee
Confidence 2 7999999999999888653 4778999999996 6776554 789999999999988665555555566
Q ss_pred EEcCC
Q 044075 765 AQSPV 769 (786)
Q Consensus 765 afspd 769 (786)
.+++|
T Consensus 380 ~~s~d 384 (386)
T 3sjl_D 380 ITTAD 384 (386)
T ss_dssp EEECC
T ss_pred EECCc
Confidence 66665
No 205
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.44 E-value=1.7e-11 Score=129.31 Aligned_cols=208 Identities=14% Similarity=0.115 Sum_probs=162.1
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCcceeeeecCCC-CCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC----C
Q 044075 562 NSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHN-NHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKG----G 636 (786)
Q Consensus 562 dg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~-~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~----~ 636 (786)
.+++|++++.|+.|.+||.++++. +..+..+. ..+.++.+.|+++.++ + .++.|..||. +++.+..+.. .
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~-~w~~~~~~~~~~~~~~~~pdG~ilv-s--~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEI-VWEYPLEKGWECNSVAATKAGEILF-S--YSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEE-EEEEECCTTCCCCEEEECTTSCEEE-E--CBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeE-EEEeCCCccCCCcCeEECCCCCEEE-e--CCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 357899999999999999988874 56666554 4789999999987554 3 4778999999 6776665542 4
Q ss_pred eEEEEEeCCCCEEEEEEC-CCeEEEEEcCCCcEEEEEec------CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe
Q 044075 637 TVQVRFQPRLGLLLAAAS-ENVVSIFDVETDRLTHSFKG------HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE 708 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~-dg~I~iwD~~t~~~i~~l~~------h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~ 708 (786)
+..+.+.++++.+++.+. ++.|..+|. +++.+..+.. +......+++.++|+++++...+ .|.+||.. ++
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 567889999999999887 788888886 6777776652 11245566789999999999888 99999998 99
Q ss_pred eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEE-EcccC------CCeEEEEEcCCCCEEEEEe
Q 044075 709 CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMT-IAAHD------CVISALAQSPVTGMVASAS 777 (786)
Q Consensus 709 ~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~-~~~h~------~~V~slafspdg~~LaSgs 777 (786)
.+.++... ..+.++.+.+++..+++++.++.|..||..+++.+. +..+. ..+..+...++|.++++..
T Consensus 157 ~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 157 LLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 99988765 455667888999999988888899999999888763 32221 2378888999999888773
No 206
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.42 E-value=1.8e-11 Score=136.79 Aligned_cols=264 Identities=8% Similarity=0.047 Sum_probs=185.3
Q ss_pred CCCCEEEEEECC-----CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe----------CCCcEEEEcCCCC
Q 044075 519 SDGKLLASAGHD-----KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS----------FDKTVRIWDAAKP 583 (786)
Q Consensus 519 pdg~~Lasgs~D-----g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs----------~Dg~I~VWdl~s~ 583 (786)
++++.+++.... +.|.++|..+++.+..+..-..+ .+.++||+++|+++. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 466666665542 69999999999999988655555 899999999888876 3678999999988
Q ss_pred cceeeeec-C------CCCCeEEEEEecCCCeEEEEEcC-CCcEEEEeCCCCeeeEeecCCeEEEEEeCCC-CEEEEEEC
Q 044075 584 NFCLQTYT-G------HNNHVMSLDFHPKKNDLFCSCDG-NSEIRFWNLSQYSCARISKGGTVQVRFQPRL-GLLLAAAS 654 (786)
Q Consensus 584 ~~~~~~~~-~------h~~~V~sl~~sp~g~~ll~sgs~-Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g-~~Ll~gs~ 654 (786)
+. +..+. + .......+.|+|++++++++... ++.|.++|+.+.+.+..+.-.-. ....|++ ..+++.+.
T Consensus 160 ~v-v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-~~~~p~g~~~~v~~~~ 237 (426)
T 3c75_H 160 LP-IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-YHIFPASPTVFYMNCR 237 (426)
T ss_dssp CE-EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEET
T ss_pred cE-EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-eeeccCCCcEEEEEcC
Confidence 74 33332 2 11345678999999999877644 68999999999988776653222 2333433 56677778
Q ss_pred CCeEEEEEcCCCcEEEEE----ecCCCCE-EEEEEcCCCCEEEEEeCC-eEEEEECCCCeeE--EEEccC----------
Q 044075 655 ENVVSIFDVETDRLTHSF----KGHSTEI-HSVCWDTNGEYLASVSQD-SVRVWSLASGECI--HELSSS---------- 716 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l----~~h~~~I-~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i--~~l~~~---------- 716 (786)
||.+.+.+..+++..... .....++ ..+.|.+++..++..+.. .|.+.|+...... ..+...
T Consensus 238 dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 238 DGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp TSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEE
T ss_pred CCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccc
Confidence 888888888666554321 1111121 235678888877776666 8999998765322 111100
Q ss_pred CCceEEEEEeCCCCEEEEEEC----------CCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCC-EEEEEe-CCCcEEE
Q 044075 717 GNKFHSCIFHPSYPTLMVIGG----------YQSLELWNMAENKCMTIAAHDCVISALAQSPVTG-MVASAS-HDKSVKI 784 (786)
Q Consensus 717 ~~~I~sv~fspdg~~L~sgs~----------dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~-~LaSgs-~DG~I~I 784 (786)
......++++++++.+++... .+.|.++|+.+.+.+....-.....+++|+||++ +++++. .++.|.|
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsV 397 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHI 397 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEE
Confidence 011223689999998887753 3579999999999885544444689999999999 888888 5899999
Q ss_pred eC
Q 044075 785 WK 786 (786)
Q Consensus 785 Wd 786 (786)
+|
T Consensus 398 ID 399 (426)
T 3c75_H 398 YD 399 (426)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.42 E-value=9.1e-11 Score=131.00 Aligned_cols=230 Identities=9% Similarity=0.080 Sum_probs=165.5
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCC--cEEEEcCCCCccee
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDK--TVRIWDAAKPNFCL 587 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg--~I~VWdl~s~~~~~ 587 (786)
.....|+|+++++++++...++.|++||.+++........... .. ++|+++++.|+++..++ .|.+|+...... .
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-P 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-E
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCce-e
Confidence 4688999999999777777789999999998777665544333 33 99999999999988866 788888765542 2
Q ss_pred eee----cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe----ec---CCe-E-EEEEeCCCCEEEEEE-
Q 044075 588 QTY----TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI----SK---GGT-V-QVRFQPRLGLLLAAA- 653 (786)
Q Consensus 588 ~~~----~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~----~~---~~i-~-~i~~sp~g~~Ll~gs- 653 (786)
..+ ......+.+++++|++..+++ ++.++.|+.||..+...... .. ... . .++|+|++..|+++.
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 222 224567889999997677775 66788999999987654333 11 111 3 899999766666655
Q ss_pred CCCeEEEEEcCCCcEEEEEecCC---------------CCEEEEEEcCCCCEEEEEe-CC-eEEEEECCCCeeEEEEccC
Q 044075 654 SENVVSIFDVETDRLTHSFKGHS---------------TEIHSVCWDTNGEYLASVS-QD-SVRVWSLASGECIHELSSS 716 (786)
Q Consensus 654 ~dg~I~iwD~~t~~~i~~l~~h~---------------~~I~sv~~spdg~~Lasgs-~D-~I~vwDl~s~~~i~~l~~~ 716 (786)
.++.|+.||.... +..+.++. .....++++++|+++++-+ .+ .|++||+.++... ++.++
T Consensus 287 ~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~ 363 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQ 363 (409)
T ss_dssp TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEEC
T ss_pred CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeCC
Confidence 4688999997654 33333332 4578999999999777776 66 9999998887643 33332
Q ss_pred ---------------CCceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 044075 717 ---------------GNKFHSCIFHPSYPTLMVIGGYQSLELWNM 746 (786)
Q Consensus 717 ---------------~~~I~sv~fspdg~~L~sgs~dg~I~IwDl 746 (786)
-.....+++++++..+++-..++.|+.+++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 235788999999766666666678887765
No 208
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=5e-12 Score=137.43 Aligned_cols=263 Identities=10% Similarity=0.015 Sum_probs=175.1
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEE--CCCeEEEEEcCCCeeeeec-------CCCCCCeEEEEEccCCCEEEEE
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAG--HDKKVVVWNMENFQTECTP-------DDHNHIITDVRFRPNSTQLATS 569 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs--~Dg~V~IWdl~t~~~~~~l-------~~h~~~V~sl~fspdg~~Lasg 569 (786)
++.+..+. ..+..++++++|+++++.. .++.++||.+.+++.. .+ ..|...+.+|+|+++++++++-
T Consensus 9 ~~~v~~~~---~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D 84 (343)
T 2qe8_A 9 LEVVAELS---LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLD 84 (343)
T ss_dssp CEEEEEES---SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEE
T ss_pred eEEEEEcC---CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEc
Confidence 34444443 6799999999999988864 2343666666555433 22 2355689999999998765554
Q ss_pred eC-----CCcEEEEcCCCCcceeeeec------CCCCCeEEEEEecCCCeEEEEEc---CCCcEEEEeCCCCeeeEeecC
Q 044075 570 SF-----DKTVRIWDAAKPNFCLQTYT------GHNNHVMSLDFHPKKNDLFCSCD---GNSEIRFWNLSQYSCARISKG 635 (786)
Q Consensus 570 s~-----Dg~I~VWdl~s~~~~~~~~~------~h~~~V~sl~~sp~g~~ll~sgs---~Dg~I~iwDl~~~~~~~~~~~ 635 (786)
.. ++.|.+||+.+++. +..+. .+...+..+++++++..++++.. .++.|.+||+.+++..+...+
T Consensus 85 ~g~~~~~~~~i~~~d~~tg~~-~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~ 163 (343)
T 2qe8_A 85 NGNQSKSVPKLVAWDTLNNQL-SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQG 163 (343)
T ss_dssp CHHHHTSCCEEEEEETTTTEE-EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTT
T ss_pred CCCCcCCCCeEEEEECCCCeE-EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecC
Confidence 33 57899999987763 33332 12345689999987777776766 688999999998877665543
Q ss_pred C--eE--EEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECC---C
Q 044075 636 G--TV--QVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLA---S 706 (786)
Q Consensus 636 ~--i~--~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~---s 706 (786)
+ .. ...+.+++..+.+...++.+..|. ..+..|+|+|+++.|+++... .|..++.. .
T Consensus 164 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~ 229 (343)
T 2qe8_A 164 YPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSN 229 (343)
T ss_dssp CTTTSCCSCCCEETTEECBEECTTSCEECCC--------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTC
T ss_pred CCcccccccceeECCEEEEeccCCCceecee--------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcC
Confidence 1 10 133445565566666666665442 246889999999988888765 55555532 1
Q ss_pred Ce--------eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcc--cCCCeEEEEEcCCCCEEEEE
Q 044075 707 GE--------CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAA--HDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 707 ~~--------~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~--h~~~V~slafspdg~~LaSg 776 (786)
+. .+..+ ++......++++++|..+++...++.|.+||..+++...+.. +...+.+++|.+++.++++.
T Consensus 230 ~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 230 LQLTDAELGSKIERY-SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp TTCCHHHHHTTCEEE-EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEE
T ss_pred CCCChhhhhcceEec-ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEe
Confidence 10 01111 222345678999999888887788899999995666544432 34568999999999888887
Q ss_pred eCCCc
Q 044075 777 SHDKS 781 (786)
Q Consensus 777 s~DG~ 781 (786)
+..+.
T Consensus 309 ~~~~~ 313 (343)
T 2qe8_A 309 NQLHH 313 (343)
T ss_dssp CCGGG
T ss_pred Ccccc
Confidence 65443
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.40 E-value=6.9e-10 Score=116.03 Aligned_cols=232 Identities=6% Similarity=-0.020 Sum_probs=166.9
Q ss_pred CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe
Q 044075 549 DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS 628 (786)
Q Consensus 549 ~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~ 628 (786)
.....+.++++.++++++++...++.|.+||.. ++.....+..+...+.++++.+++. ++++...++.|..||.. ++
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD-IWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SC
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCC-EEEEecCCCeEEEECCC-CC
Confidence 345678999999999877777678999999988 5432222333446789999998876 55466667889999988 44
Q ss_pred eeEee----cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEE-EEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEE
Q 044075 629 CARIS----KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTH-SFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVW 702 (786)
Q Consensus 629 ~~~~~----~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~-~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vw 702 (786)
..... ...+..+++.+++..+++...++.|..||.. ++... .+......+.+++++++++++++...+ .|.+|
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred eEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 43222 1457788999988877766667899999988 55442 233345678999999999977666655 89999
Q ss_pred ECCCCeeEEE-EccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEE--cccCCCeEEEEEcCCCCEEEEEeCC
Q 044075 703 SLASGECIHE-LSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTI--AAHDCVISALAQSPVTGMVASASHD 779 (786)
Q Consensus 703 Dl~s~~~i~~-l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~--~~h~~~V~slafspdg~~LaSgs~D 779 (786)
|. +++.... .......+..+++++++..+++....+.|.+||. ++..... ..+...+.++++++++.++++...+
T Consensus 173 ~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 173 TN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCC
Confidence 98 5554432 2233456889999999876665555678999998 4544433 3456678999999999877766667
Q ss_pred CcEEEeC
Q 044075 780 KSVKIWK 786 (786)
Q Consensus 780 G~I~IWd 786 (786)
+.|.+||
T Consensus 251 ~~i~~~~ 257 (300)
T 2qc5_A 251 NQIGRIT 257 (300)
T ss_dssp TEEEEEC
T ss_pred CeEEEEC
Confidence 8888775
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.40 E-value=3.7e-10 Score=119.85 Aligned_cols=227 Identities=13% Similarity=0.128 Sum_probs=157.9
Q ss_pred cCCCCeEEEEEcCCC-CEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc
Q 044075 507 KSSSKVTCCHFSSDG-KLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF 585 (786)
Q Consensus 507 ~H~~~V~~lafSpdg-~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~ 585 (786)
.+..-..+..|++++ .++++...++.|..||..+++.. .+ .+...+.++++++++++++ +. +..|.+||..+++.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQSA 85 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEE
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCcE
Confidence 344456789999954 45666667889999999876653 22 2346799999999999554 44 56799999987653
Q ss_pred eeeeec--C-CCCCeEEEEEecCCCeEEEEEcC----------CCcEEEEeCCCCeeeEee--cCCeEEEEEeCCCCEEE
Q 044075 586 CLQTYT--G-HNNHVMSLDFHPKKNDLFCSCDG----------NSEIRFWNLSQYSCARIS--KGGTVQVRFQPRLGLLL 650 (786)
Q Consensus 586 ~~~~~~--~-h~~~V~sl~~sp~g~~ll~sgs~----------Dg~I~iwDl~~~~~~~~~--~~~i~~i~~sp~g~~Ll 650 (786)
...... . ....+.+++++|++..++.+... .+.|+.++.. ++..... ......++|+|+++.++
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFY 164 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEE
Confidence 211111 1 12457899999998855433221 2344444443 2322222 24457899999999876
Q ss_pred EEEC-CCeEEEEEc--CCCcEE-----EEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceE
Q 044075 651 AAAS-ENVVSIFDV--ETDRLT-----HSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFH 721 (786)
Q Consensus 651 ~gs~-dg~I~iwD~--~t~~~i-----~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~ 721 (786)
++.. ++.|.+||+ .++... ..+..+...+..++++++|+++++...+ .|.+||..+++.+..+..+...++
T Consensus 165 v~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t 244 (297)
T 3g4e_A 165 YIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTT 244 (297)
T ss_dssp EEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEE
T ss_pred EecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCce
Confidence 6655 688999997 455432 2222334567899999999988887776 899999999999999888778899
Q ss_pred EEEEe-CCCCEEEEEECC
Q 044075 722 SCIFH-PSYPTLMVIGGY 738 (786)
Q Consensus 722 sv~fs-pdg~~L~sgs~d 738 (786)
+++|. |+++.|++++..
T Consensus 245 ~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 245 SCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEEESGGGCEEEEEEBC
T ss_pred EEEEeCCCCCEEEEEcCC
Confidence 99998 888888777754
No 211
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.40 E-value=7.1e-12 Score=138.27 Aligned_cols=172 Identities=14% Similarity=0.135 Sum_probs=137.5
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe-----------eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ-----------TECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD 579 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~-----------~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd 579 (786)
.+..+++++...+|++|+.++ ++||++++.. ..... .+.. |+.|+| |+++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 699999999999999999875 6669876433 11222 3556 999999 88999998 889999999
Q ss_pred CCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEE
Q 044075 580 AAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVS 659 (786)
Q Consensus 580 l~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~ 659 (786)
+.+.. .......|...|.++.+.+. . ++++..||.|.+||+..+.... ....+.+++|+|+| +++|..||.++
T Consensus 113 v~sl~-~~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~~~-~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 113 LEELS-EFRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKSTKQ-LAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp SSSTT-CEEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCEEE-EEESEEEEEECSSE--EEEEETTSCEE
T ss_pred chhhh-ccCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCcccc-ccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 98766 34455667778888877654 3 5678889999999999777654 55789999999999 78899999999
Q ss_pred EEEcCCCcE--EEEE------e---cCCCCEEEEEEcCCCCEEEEEe
Q 044075 660 IFDVETDRL--THSF------K---GHSTEIHSVCWDTNGEYLASVS 695 (786)
Q Consensus 660 iwD~~t~~~--i~~l------~---~h~~~I~sv~~spdg~~Lasgs 695 (786)
+|+...... ...+ . +|...|.+|+|.+++.++++-.
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 999988775 5566 2 3788999999999999988743
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.39 E-value=1.1e-10 Score=130.40 Aligned_cols=229 Identities=13% Similarity=0.045 Sum_probs=160.6
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC-cEEEEeCCCCeee
Q 044075 552 HIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS-EIRFWNLSQYSCA 630 (786)
Q Consensus 552 ~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg-~I~iwDl~~~~~~ 630 (786)
.....|+|+++++++++...++.|++||..++.. ...... ..... ++|+++++.++++....+ .|.+|+.......
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~-~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKV-TTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEE-EEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEE-EEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 4678999999998777777779999999987652 333332 23334 999999987775544333 7999988765432
Q ss_pred Eee-------cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEE----EecCCCCE--EEEEEcCCCC-EEEEEeC
Q 044075 631 RIS-------KGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHS----FKGHSTEI--HSVCWDTNGE-YLASVSQ 696 (786)
Q Consensus 631 ~~~-------~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~----l~~h~~~I--~sv~~spdg~-~Lasgs~ 696 (786)
... ...+..++++|++..|+++..++.|+.||..++..... ..++...- ..++|+|++. ++++...
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 222 24567899999777777777788999999987754332 22222222 3999999644 4444444
Q ss_pred C-eEEEEECCCCeeEEEEccCC---------------CceEEEEEeCCCCEEEEEE-CCCeEEEEECCCCeEEEEccc--
Q 044075 697 D-SVRVWSLASGECIHELSSSG---------------NKFHSCIFHPSYPTLMVIG-GYQSLELWNMAENKCMTIAAH-- 757 (786)
Q Consensus 697 D-~I~vwDl~s~~~i~~l~~~~---------------~~I~sv~fspdg~~L~sgs-~dg~I~IwDl~~~~~~~~~~h-- 757 (786)
+ .|+.||.... +..+.++. .....+++++++.++++-. .++.|+.|++.++....+.++
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~ 365 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVD 365 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTT
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCC
Confidence 5 8999997654 33333321 3478899999999666655 678999999888887766655
Q ss_pred -------------CCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 758 -------------DCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 758 -------------~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
-.....|++++++.++++-..++.|+.+
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 2468999999998888887778888765
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.38 E-value=4.9e-10 Score=118.90 Aligned_cols=224 Identities=9% Similarity=0.049 Sum_probs=153.3
Q ss_pred cCCCCCCeEEEEEccCCC-EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC
Q 044075 547 PDDHNHIITDVRFRPNST-QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS 625 (786)
Q Consensus 547 l~~h~~~V~sl~fspdg~-~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~ 625 (786)
+..+..-..+..|++++. ++++...++.|..||..++.. ..+ .....+.+++++++++ ++++ . ++.|.+||..
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~--~~~-~~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d~~ 81 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV--QRV-TMDAPVSSVALRQSGG-YVAT-I-GTKFCALNWK 81 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEE-ECSSCEEEEEEBTTSS-EEEE-E-TTEEEEEETT
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE--EEE-eCCCceEEEEECCCCC-EEEE-E-CCeEEEEECC
Confidence 344455667899999654 555666688999999987653 222 2346799999999988 4433 3 5689999998
Q ss_pred CCeeeEeec-------CCeEEEEEeCCCCEEEEEECC-----------CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCC
Q 044075 626 QYSCARISK-------GGTVQVRFQPRLGLLLAAASE-----------NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTN 687 (786)
Q Consensus 626 ~~~~~~~~~-------~~i~~i~~sp~g~~Ll~gs~d-----------g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spd 687 (786)
+++...... ..+..++++++|+.+++.... +.|+.+|.. ++... +..+....+.++|+|+
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi~~spd 159 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGLDWSLD 159 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEEEECTT
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-EeeccccccceEEcCC
Confidence 876544322 235678999999866554322 344444443 33332 3334455789999999
Q ss_pred CCEEEEEeC-C-eEEEEEC--CCCee-----EEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEccc
Q 044075 688 GEYLASVSQ-D-SVRVWSL--ASGEC-----IHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAH 757 (786)
Q Consensus 688 g~~Lasgs~-D-~I~vwDl--~s~~~-----i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h 757 (786)
++.|+.+.. + .|.+||+ .++.. +..+.........++++++|.+.++....+.|.+||..+++.+ .+..+
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence 997766554 3 8999987 45543 2223333456788999999987777777889999999988766 44455
Q ss_pred CCCeEEEEEc-CCCCEEEEEeC
Q 044075 758 DCVISALAQS-PVTGMVASASH 778 (786)
Q Consensus 758 ~~~V~slafs-pdg~~LaSgs~ 778 (786)
...+++++|. |+++.|+.++.
T Consensus 240 ~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 240 VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp SSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCceEEEEeCCCCCEEEEEcC
Confidence 6789999998 88876655543
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.38 E-value=3.3e-11 Score=143.77 Aligned_cols=243 Identities=13% Similarity=0.106 Sum_probs=167.2
Q ss_pred cCCCCeEEEEEcCCCCEEEEEE-----CCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCc-------
Q 044075 507 KSSSKVTCCHFSSDGKLLASAG-----HDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKT------- 574 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs-----~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~------- 574 (786)
+|...|..++|||||++||.+. ....|+|||+.+++.+... .+......++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 4666789999999999988543 2357999999998865431 111113578899 9999999888744
Q ss_pred ------EEEEcCCCCcc---eeeeecC-CCCCeEEEEEecCCCeEEEEEcCC---CcEEEEeCCCC--eeeEeec--CCe
Q 044075 575 ------VRIWDAAKPNF---CLQTYTG-HNNHVMSLDFHPKKNDLFCSCDGN---SEIRFWNLSQY--SCARISK--GGT 637 (786)
Q Consensus 575 ------I~VWdl~s~~~---~~~~~~~-h~~~V~sl~~sp~g~~ll~sgs~D---g~I~iwDl~~~--~~~~~~~--~~i 637 (786)
|++|++.+... ++..... |...+.++.|+|+++.++++.+.+ ..|+++|+.+. ....... ...
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 99999987653 2222233 445678999999999988776533 58999999765 2232222 333
Q ss_pred EEEEEeCCCCEEEEEECC----CeEEEEEcCCCcE--EEEEecCCCCEEEEEEcCCCCEEEEEeC-C---eEEEEECCCC
Q 044075 638 VQVRFQPRLGLLLAAASE----NVVSIFDVETDRL--THSFKGHSTEIHSVCWDTNGEYLASVSQ-D---SVRVWSLASG 707 (786)
Q Consensus 638 ~~i~~sp~g~~Ll~gs~d----g~I~iwD~~t~~~--i~~l~~h~~~I~sv~~spdg~~Lasgs~-D---~I~vwDl~s~ 707 (786)
... ++++++.|+..+.. +.|.++|+.++.. ...+..|...+. .|++++++|+.... + .|++||+..+
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 333 67777777666653 5799999988643 334555666665 88899988876653 3 5899998855
Q ss_pred eeEEEEcc-CCCceEEEEEeCCCCEEEEEECC----CeEEEEECCCCeEEEEc
Q 044075 708 ECIHELSS-SGNKFHSCIFHPSYPTLMVIGGY----QSLELWNMAENKCMTIA 755 (786)
Q Consensus 708 ~~i~~l~~-~~~~I~sv~fspdg~~L~sgs~d----g~I~IwDl~~~~~~~~~ 755 (786)
. ...+.. ....+..+.+++++..|+....+ +.|+.||+.+++...+.
T Consensus 361 ~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 361 R-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp E-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred e-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 4 444443 34567777888888877766554 68999999887655443
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.35 E-value=1e-09 Score=118.25 Aligned_cols=221 Identities=12% Similarity=0.060 Sum_probs=154.0
Q ss_pred CeEEEEEcCCCC-EEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 511 KVTCCHFSSDGK-LLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 511 ~V~~lafSpdg~-~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
-..+++|+|++. ++++...++.|.+||..+++... +. +...|.+++|+++++++++. .+ .|.+||..+++.. ..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~-~~ 124 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLT-LH 124 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEE-EE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEE-EE
Confidence 356789999754 55666678899999998876543 22 34579999999999876654 44 4999998876632 21
Q ss_pred ecC----CCCCeEEEEEecCCCeEEEEEcC-----CCcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEEC-CCe
Q 044075 590 YTG----HNNHVMSLDFHPKKNDLFCSCDG-----NSEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAAS-ENV 657 (786)
Q Consensus 590 ~~~----h~~~V~sl~~sp~g~~ll~sgs~-----Dg~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~-dg~ 657 (786)
... ....+.+++++|++..++.+.+. .+.|..++ +++...... .....++|+++++.++++.. ++.
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 111 12458899999998855433221 24566666 444433222 45678999999998776654 689
Q ss_pred EEEEEcC--CC-c-----EEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEe-C
Q 044075 658 VSIFDVE--TD-R-----LTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFH-P 727 (786)
Q Consensus 658 I~iwD~~--t~-~-----~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fs-p 727 (786)
|.+||+. ++ . ....+......+.+++++++|.++++...+ .|.+||. +++.+..+..+...+.+++|. +
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~ 281 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGP 281 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEEST
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecC
Confidence 9999986 55 3 222333344567889999999988877665 8999998 677777777777789999998 8
Q ss_pred CCCEEEEEECCC
Q 044075 728 SYPTLMVIGGYQ 739 (786)
Q Consensus 728 dg~~L~sgs~dg 739 (786)
++..|++++..+
T Consensus 282 d~~~L~vt~~~~ 293 (326)
T 2ghs_A 282 DASRLLVTSARE 293 (326)
T ss_dssp TSCEEEEEEBCT
T ss_pred CCCEEEEEecCC
Confidence 888887776543
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.34 E-value=1.5e-09 Score=117.04 Aligned_cols=217 Identities=10% Similarity=0.061 Sum_probs=148.5
Q ss_pred CeEEEEEccCCC-EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE
Q 044075 553 IITDVRFRPNST-QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR 631 (786)
Q Consensus 553 ~V~sl~fspdg~-~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~ 631 (786)
...+++|+|++. ++++...++.|.+||..++.. ..+. ....+.++.|.+++..++ ++ +..|.+||..+++...
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~--~~~~-~~~~v~~i~~~~dg~l~v-~~--~~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK--TVHA-LPFMGSALAKISDSKQLI-AS--DDGLFLRDTATGVLTL 123 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE--EEEE-CSSCEEEEEEEETTEEEE-EE--TTEEEEEETTTCCEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE--EEEE-CCCcceEEEEeCCCeEEE-EE--CCCEEEEECCCCcEEE
Confidence 356788999754 555666688999999987652 2222 346799999999987554 33 3459999998776544
Q ss_pred eec-------CCeEEEEEeCCCCEEEEEEC------CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC-C
Q 044075 632 ISK-------GGTVQVRFQPRLGLLLAAAS------ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ-D 697 (786)
Q Consensus 632 ~~~-------~~i~~i~~sp~g~~Ll~gs~------dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~-D 697 (786)
... ..+..++++++++.+++... .+.|+.+| +++... +..+......++|+++++.|+.+.. +
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 322 13577899999986665442 25677777 454333 3223345789999999997766653 4
Q ss_pred -eEEEEECC--CC-e-----eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCeEEEEEc-
Q 044075 698 -SVRVWSLA--SG-E-----CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVISALAQS- 767 (786)
Q Consensus 698 -~I~vwDl~--s~-~-----~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~slafs- 767 (786)
.|.+||+. ++ + .+..+......+..+++++++.++++...++.|.+||........+..+...+++++|+
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g 280 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIG 280 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEEEES
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECCCCCcEEEEEec
Confidence 89999986 55 3 23333333456788999999987777767789999999544334555566679999998
Q ss_pred CCCCEEEEEeC
Q 044075 768 PVTGMVASASH 778 (786)
Q Consensus 768 pdg~~LaSgs~ 778 (786)
+++..|+.++.
T Consensus 281 ~d~~~L~vt~~ 291 (326)
T 2ghs_A 281 PDASRLLVTSA 291 (326)
T ss_dssp TTSCEEEEEEB
T ss_pred CCCCEEEEEec
Confidence 88876655543
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.33 E-value=7.6e-11 Score=131.72 Aligned_cols=248 Identities=13% Similarity=0.119 Sum_probs=176.8
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEE----------CCCeEEEEEcCCCeeeeecCCC-------CCCeEEEEEcc
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAG----------HDKKVVVWNMENFQTECTPDDH-------NHIITDVRFRP 561 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs----------~Dg~V~IWdl~t~~~~~~l~~h-------~~~V~sl~fsp 561 (786)
++.+.++..-..+ .++++|||++|+++. .++.|.++|..+++.+..+.-. ......+.|+|
T Consensus 109 ~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp 186 (426)
T 3c75_H 109 GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP 186 (426)
T ss_dssp TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT
T ss_pred CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC
Confidence 3455555544445 899999999888876 3678999999999988776421 12356789999
Q ss_pred CCCEEEEEeC--CCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe----ec-
Q 044075 562 NSTQLATSSF--DKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI----SK- 634 (786)
Q Consensus 562 dg~~Lasgs~--Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~----~~- 634 (786)
|+++|+++.. ++.|.+.|+.+.+. +..+.-. . +....|++...+++.+.||.+.+.++..++.... +.
T Consensus 187 DGk~lyV~n~~~~~~VsVID~~t~kv-v~~I~v~-g---~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v 261 (426)
T 3c75_H 187 DNKNLLFYQFSPAPAVGVVDLEGKTF-DRMLDVP-D---CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHT 261 (426)
T ss_dssp TSSEEEEEECSSSCEEEEEETTTTEE-EEEEECC-S---EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSC
T ss_pred CCCEEEEEecCCCCeEEEEECCCCeE-EEEEEcC-C---ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeecc
Confidence 9999999875 57899999998774 4444321 1 1344566666666777889988888865554421 11
Q ss_pred --CC-eEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEE--EEec----------CCCCEEEEEEcCCCCEEEEEeC---
Q 044075 635 --GG-TVQVRFQPRLGLLLAAASENVVSIFDVETDRLTH--SFKG----------HSTEIHSVCWDTNGEYLASVSQ--- 696 (786)
Q Consensus 635 --~~-i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~--~l~~----------h~~~I~sv~~spdg~~Lasgs~--- 696 (786)
.. ...+.+.+++..++.....+.|++.|........ .+.. .......++++++++.+++...
T Consensus 262 ~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~ 341 (426)
T 3c75_H 262 EDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRD 341 (426)
T ss_dssp TTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECC
T ss_pred CCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccc
Confidence 11 1235678899988888889999999997654221 1110 0011123689999887766531
Q ss_pred -------C-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCC-EEEEEE-CCCeEEEEECCCCeEEEE
Q 044075 697 -------D-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYP-TLMVIG-GYQSLELWNMAENKCMTI 754 (786)
Q Consensus 697 -------D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~-~L~sgs-~dg~I~IwDl~~~~~~~~ 754 (786)
+ .|.++|+.+.+.+.++... .....+.|+|+++ .+++.. .++.|.++|+.+++.+..
T Consensus 342 ~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 342 EWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp TTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred cccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEE
Confidence 2 7999999999999888643 3578899999999 888888 489999999999998744
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.32 E-value=3.6e-10 Score=120.29 Aligned_cols=230 Identities=7% Similarity=0.001 Sum_probs=156.4
Q ss_pred eecCCCCCCeEEEEEccCCC-EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEe
Q 044075 545 CTPDDHNHIITDVRFRPNST-QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWN 623 (786)
Q Consensus 545 ~~l~~h~~~V~sl~fspdg~-~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwD 623 (786)
..+...........|+++++ ++++...++.|..|+. +++ ...+..+...+..+++++++. ++++...++.|.+|+
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~--~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT--VDVLLDATAFTNGNAVDAQQR-LVHCEHGRRAITRSD 113 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC--EEEEEESCSCEEEEEECTTSC-EEEEETTTTEEEEEC
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC--EEEEeCCCCccceeeECCCCC-EEEEECCCCEEEEEC
Confidence 33334455678899999998 5666667889999988 343 344555667799999999987 554555567899999
Q ss_pred CCCCeeeEeec-------CCeEEEEEeCCCCEEEE----EEC-------------CCeEEEEEcCCCcEEEEEecCCCCE
Q 044075 624 LSQYSCARISK-------GGTVQVRFQPRLGLLLA----AAS-------------ENVVSIFDVETDRLTHSFKGHSTEI 679 (786)
Q Consensus 624 l~~~~~~~~~~-------~~i~~i~~sp~g~~Ll~----gs~-------------dg~I~iwD~~t~~~i~~l~~h~~~I 679 (786)
.. ++...... ..+..++++++|..+++ +.. .+.|+.||..+++..... .....
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p 190 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHP 190 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSE
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCC
Confidence 86 44332211 23457899999987775 321 256888888766544433 33457
Q ss_pred EEEEEcCCCCEEEEEeC-------CeEEEEECCCCeeE--EEE-ccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC
Q 044075 680 HSVCWDTNGEYLASVSQ-------DSVRVWSLASGECI--HEL-SSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN 749 (786)
Q Consensus 680 ~sv~~spdg~~Lasgs~-------D~I~vwDl~s~~~i--~~l-~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~ 749 (786)
..++|+|+++.|+++.. ..|.+||+..+... ..+ .........++++++|+ |++++.+ .|.+|+....
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-gv~~~~~~g~ 268 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGT-GVCVFDSDGQ 268 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSS-EEEEECTTSC
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCC-cEEEECCCCC
Confidence 88999999997766644 37999998765411 111 11233456788999999 4444444 5999998544
Q ss_pred eEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 750 KCMTIAAHDCVISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 750 ~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~I 784 (786)
....+..+. .+.+++|+++++.|+.++.++..++
T Consensus 269 ~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 269 LLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred EEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 444444443 6899999999998888888876665
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.30 E-value=6.4e-10 Score=118.34 Aligned_cols=233 Identities=14% Similarity=0.125 Sum_probs=160.4
Q ss_pred EeecCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCC
Q 044075 504 SIRKSSSKVTCCHFSSDGK-LLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 504 ~l~~H~~~V~~lafSpdg~-~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s 582 (786)
.+..+........|+++|+ +++++..++.|..|+.. ++ ...+..+...+..++++++++++++...++.|.+|+.+
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~- 115 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD- 115 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-
Confidence 3444556678899999998 56677678999999984 44 34454566779999999999866665556889999986
Q ss_pred Ccceeeee---cC-CCCCeEEEEEecCCCeEEEE----EcC-------------CCcEEEEeCCCCeeeEe-ecCCeEEE
Q 044075 583 PNFCLQTY---TG-HNNHVMSLDFHPKKNDLFCS----CDG-------------NSEIRFWNLSQYSCARI-SKGGTVQV 640 (786)
Q Consensus 583 ~~~~~~~~---~~-h~~~V~sl~~sp~g~~ll~s----gs~-------------Dg~I~iwDl~~~~~~~~-~~~~i~~i 640 (786)
+.. .... .+ ....+.++++.++|..++ + +.. .+.|+.||..+++.... .......+
T Consensus 116 g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~-td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl 193 (305)
T 3dr2_A 116 GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWF-TDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGL 193 (305)
T ss_dssp SCE-EEEECEETTEECSCCCCEEECTTSCEEE-ECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEE
T ss_pred CCE-EEEEeccCCCccCCCCCEEECCCCCEEE-eCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcce
Confidence 442 1111 11 123467899999987444 4 221 25688888766554332 22445779
Q ss_pred EEeCCCCEEEEEECC------CeEEEEEcCCCcEE--EEEe-cCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEE
Q 044075 641 RFQPRLGLLLAAASE------NVVSIFDVETDRLT--HSFK-GHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIH 711 (786)
Q Consensus 641 ~~sp~g~~Ll~gs~d------g~I~iwD~~t~~~i--~~l~-~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~ 711 (786)
+|+|+++.|+++... +.|.+||+...... ..+. ........++++++|+++++. .+.|.+||. .++.+.
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~gv~~~~~-~g~~~~ 271 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTGVCVFDS-DGQLLG 271 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SSEEEEECT-TSCEEE
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CCcEEEECC-CCCEEE
Confidence 999999988888775 78999998765411 1111 123445678999999955544 558999998 577777
Q ss_pred EEccCCCceEEEEEeCCCCEEEEEECCCeEEEEE
Q 044075 712 ELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWN 745 (786)
Q Consensus 712 ~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwD 745 (786)
.+..+. .+.+++|.++++.|++++.++ |+.++
T Consensus 272 ~~~~~~-~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 272 HIPTPG-TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp EEECSS-CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred EEECCC-ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 776654 588899999999898888764 44444
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.28 E-value=3.6e-11 Score=132.10 Aligned_cols=256 Identities=11% Similarity=0.060 Sum_probs=176.4
Q ss_pred eeeeEEeecCCCCeEEEEEcCCCCEEEEEE----------CCCeEEEEEcCCCeeeeecCCC-------CCCeEEEEEcc
Q 044075 499 FNEVSSIRKSSSKVTCCHFSSDGKLLASAG----------HDKKVVVWNMENFQTECTPDDH-------NHIITDVRFRP 561 (786)
Q Consensus 499 ~~~v~~l~~H~~~V~~lafSpdg~~Lasgs----------~Dg~V~IWdl~t~~~~~~l~~h-------~~~V~sl~fsp 561 (786)
++.+.++..-..+ .+.|+||+++|+++. .++.|.+||+.+++.+.++... ......+.|+|
T Consensus 56 ~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~Sp 133 (368)
T 1mda_H 56 GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA 133 (368)
T ss_dssp TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT
T ss_pred CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcC
Confidence 3455556544555 799999999998886 3688999999999999887533 12356899999
Q ss_pred CCCEEEEEeC--CCcEEE--EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC-----CeeeEe
Q 044075 562 NSTQLATSSF--DKTVRI--WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ-----YSCARI 632 (786)
Q Consensus 562 dg~~Lasgs~--Dg~I~V--Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~-----~~~~~~ 632 (786)
|+++++++.. +..|.+ +|+.+ +..+.- .+ |+.+.|++...+++.+.|+.+.+.|+.+ ++....
T Consensus 134 DGk~lyVan~~~~~~v~V~~iD~~t----v~~i~v-~~---~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~ 205 (368)
T 1mda_H 134 SSACLLFFLFGSSAAAGLSVPGASD----DQLTKS-AS---CFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQ 205 (368)
T ss_dssp TSSCEEEEECSSSCEEEEEETTTEE----EEEEEC-SS---CCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCC
T ss_pred CCCEEEEEccCCCCeEEEEEEchhh----ceEEEC-CC---ceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEE
Confidence 9999999875 356888 99876 222221 11 1224567777777778899999999887 433211
Q ss_pred ----ec-CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC--cEEEEEec-------CC---CCEEEEEEcCCCCEEEEE-
Q 044075 633 ----SK-GGTVQVRFQPRLGLLLAAASENVVSIFDVETD--RLTHSFKG-------HS---TEIHSVCWDTNGEYLASV- 694 (786)
Q Consensus 633 ----~~-~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~--~~i~~l~~-------h~---~~I~sv~~spdg~~Lasg- 694 (786)
.. +.... . .+++..++..+. +.|.+.|+.+. +.+..+.. +. .....++++++++.++++
T Consensus 206 ~t~~i~vg~~P~-~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~ 282 (368)
T 1mda_H 206 CTGAQNCSSQAA-Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILT 282 (368)
T ss_dssp SCTTSCBCSCCE-E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred eeeeeeCCCCcc-c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEe
Confidence 11 11111 3 677777777777 99999999754 23332211 00 111126899999888764
Q ss_pred e---C------CeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCE-EEEEE-CCCeEEEEECCCCeEEEEcccCCCeEE
Q 044075 695 S---Q------DSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPT-LMVIG-GYQSLELWNMAENKCMTIAAHDCVISA 763 (786)
Q Consensus 695 s---~------D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~-L~sgs-~dg~I~IwDl~~~~~~~~~~h~~~V~s 763 (786)
. . +.+.++|+.+.+.+.++... .....+.|+|++++ +++.. .++.|.++|+.+++.+....-......
T Consensus 283 ~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~ 361 (368)
T 1mda_H 283 VEHSRSCLAAAENTSSVTASVGQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPES 361 (368)
T ss_dssp EECSSCTTSCEEEEEEEESSSCCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCE
T ss_pred ccccCcccccCCCEEEEECCCCeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCE
Confidence 3 2 36669999999988887654 36789999999985 55555 489999999999998866655555666
Q ss_pred EEEcC
Q 044075 764 LAQSP 768 (786)
Q Consensus 764 lafsp 768 (786)
+++.+
T Consensus 362 i~~~~ 366 (368)
T 1mda_H 362 LSVQN 366 (368)
T ss_dssp EECCC
T ss_pred EEeec
Confidence 76654
No 221
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.18 E-value=2.3e-09 Score=127.71 Aligned_cols=262 Identities=11% Similarity=0.098 Sum_probs=176.7
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCC----------e-EEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHNHI----------I-TDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~----------V-~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
+..|++++.++.|+.+|..+++.+-.+..+... + ..+.. .+..|++++.|+.|..+|..+++.+-..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 567778888999999999999998887543221 1 11222 3567888999999999999998843222
Q ss_pred ecC-CCC---CeEE-EEEecCCCeEEEEEc-----CCCcEEEEeCCCCeeeEeecCC-----------------------
Q 044075 590 YTG-HNN---HVMS-LDFHPKKNDLFCSCD-----GNSEIRFWNLSQYSCARISKGG----------------------- 636 (786)
Q Consensus 590 ~~~-h~~---~V~s-l~~sp~g~~ll~sgs-----~Dg~I~iwDl~~~~~~~~~~~~----------------------- 636 (786)
... +.. .+.+ ..+. +..+++.++ .++.|+.||..+++.+-.+...
T Consensus 148 ~~~~~~~~~~~~~~sP~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVV--NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred cCcCCCCCCccccCCcEEE--CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 221 111 1111 1111 344544332 3689999999998876543210
Q ss_pred -----------eEEEEEeCCCCEEEEEECCCe-------------------EEEEEcCCCcEEEEEec--CC-------C
Q 044075 637 -----------TVQVRFQPRLGLLLAAASENV-------------------VSIFDVETDRLTHSFKG--HS-------T 677 (786)
Q Consensus 637 -----------i~~i~~sp~g~~Ll~gs~dg~-------------------I~iwD~~t~~~i~~l~~--h~-------~ 677 (786)
...++++++.+.+++++.++. |..+|.++++.+..+.. |. .
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 305 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ 305 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence 014678898899999887763 99999999999988864 22 1
Q ss_pred CEEEEEEcCCCC---EEEEEeCC-eEEEEECCCCeeEEEEccCCC-----------------------------------
Q 044075 678 EIHSVCWDTNGE---YLASVSQD-SVRVWSLASGECIHELSSSGN----------------------------------- 718 (786)
Q Consensus 678 ~I~sv~~spdg~---~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~----------------------------------- 718 (786)
.+.......+|+ +++.++.+ .|+++|.++|+.+........
T Consensus 306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~ 385 (689)
T 1yiq_A 306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAF 385 (689)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCT
T ss_pred CcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCc
Confidence 222223333565 67788887 999999999998854332110
Q ss_pred ----ceEEEEEeCCCCEEEEEEC---------------------------------------------CCeEEEEECCCC
Q 044075 719 ----KFHSCIFHPSYPTLMVIGG---------------------------------------------YQSLELWNMAEN 749 (786)
Q Consensus 719 ----~I~sv~fspdg~~L~sgs~---------------------------------------------dg~I~IwDl~~~ 749 (786)
....++|+|+...+++... +|.|+.||+.++
T Consensus 386 ~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG 465 (689)
T 1yiq_A 386 WGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ 465 (689)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT
T ss_pred ccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC
Confidence 0112688898887777632 367999999999
Q ss_pred eEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 750 KCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 750 ~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+.+-...+...+....+...+.++++++.||.|++||
T Consensus 466 ~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 466 QAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp EEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred CeEeEccCCCCccCccceECCCEEEEECCCCcEEEEE
Confidence 9885554445455446666788999999999999986
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.17 E-value=1.3e-09 Score=129.81 Aligned_cols=232 Identities=12% Similarity=0.095 Sum_probs=157.0
Q ss_pred CCCCCeEEEEEccCCCEEEEEe-----CCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC-------
Q 044075 549 DHNHIITDVRFRPNSTQLATSS-----FDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN------- 616 (786)
Q Consensus 549 ~h~~~V~sl~fspdg~~Lasgs-----~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D------- 616 (786)
+|...|..++|+||+++||.+. .+..|+|||+.+++.....+.. .....++|+ |++.++++...+
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCccccccc
Confidence 4556789999999999888543 2357999999998743222221 113578899 999888665542
Q ss_pred -----CcEEEEeCCCCee--eEeec--C----CeEEEEEeCCCCEEEEEEC----CCeEEEEEcCCCc-EEEEEecCCCC
Q 044075 617 -----SEIRFWNLSQYSC--ARISK--G----GTVQVRFQPRLGLLLAAAS----ENVVSIFDVETDR-LTHSFKGHSTE 678 (786)
Q Consensus 617 -----g~I~iwDl~~~~~--~~~~~--~----~i~~i~~sp~g~~Ll~gs~----dg~I~iwD~~t~~-~i~~l~~h~~~ 678 (786)
..|++|++.+... ..++. . ....+.|+|++++|+.... .+.|+++|+.++. ....+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 3499999986542 22222 2 3567899999998876654 2589999998763 34455556665
Q ss_pred EEEEEEcCCCCEEEEEeC----C-eEEEEECCCCee--EEEEccCCCceEEEEEeCCCCEEEEEECCC---eEEEEECCC
Q 044075 679 IHSVCWDTNGEYLASVSQ----D-SVRVWSLASGEC--IHELSSSGNKFHSCIFHPSYPTLMVIGGYQ---SLELWNMAE 748 (786)
Q Consensus 679 I~sv~~spdg~~Lasgs~----D-~I~vwDl~s~~~--i~~l~~~~~~I~sv~fspdg~~L~sgs~dg---~I~IwDl~~ 748 (786)
.... |+++|..|+..+. . .|.++|+.++.. ...+..+...+. .|++++.+|+....++ .|++||+..
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 5555 6666666555442 2 699999988654 345555655555 8899998888776654 799999987
Q ss_pred CeEEEEc-ccCCCeEEEEEcCCCCEEEEEeCC----CcEEEeC
Q 044075 749 NKCMTIA-AHDCVISALAQSPVTGMVASASHD----KSVKIWK 786 (786)
Q Consensus 749 ~~~~~~~-~h~~~V~slafspdg~~LaSgs~D----G~I~IWd 786 (786)
+....+. .+...+..+.+++++..|+....+ +.|..||
T Consensus 360 ~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d 402 (693)
T 3iuj_A 360 KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFE 402 (693)
T ss_dssp CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEE
Confidence 7655543 345567788888888866555444 6677665
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.16 E-value=3.2e-09 Score=126.11 Aligned_cols=261 Identities=11% Similarity=0.074 Sum_probs=182.0
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCC-----------eEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHNHI-----------ITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~-----------V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
+..|++++.++.|..+|..+++.+-.+...... ...+++ ++..|++++.|+.|..+|..+++. +..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~-~W~ 153 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKE-VWH 153 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCE-EEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCE-Eee
Confidence 556777778899999999999998877543210 112333 356888899999999999999884 333
Q ss_pred ecCC-C----CCeEE-EEEecCCCeEEEEEc-----CCCcEEEEeCCCCeeeEeecC--C--------------------
Q 044075 590 YTGH-N----NHVMS-LDFHPKKNDLFCSCD-----GNSEIRFWNLSQYSCARISKG--G-------------------- 636 (786)
Q Consensus 590 ~~~h-~----~~V~s-l~~sp~g~~ll~sgs-----~Dg~I~iwDl~~~~~~~~~~~--~-------------------- 636 (786)
+..+ . ..+.+ ..+. +..+++.++ .++.|+.||..+++.+..+.. .
T Consensus 154 ~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 154 QNTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp EETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred ecCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 3322 1 11211 1122 344554433 268999999999887654331 0
Q ss_pred -------------eEEEEEeCCCCEEEEEECCC-------------------eEEEEEcCCCcEEEEEec--CC------
Q 044075 637 -------------TVQVRFQPRLGLLLAAASEN-------------------VVSIFDVETDRLTHSFKG--HS------ 676 (786)
Q Consensus 637 -------------i~~i~~sp~g~~Ll~gs~dg-------------------~I~iwD~~t~~~i~~l~~--h~------ 676 (786)
...++++++++.+++++.++ .|..+|.++++.+..+.. |.
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~ 311 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS 311 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc
Confidence 02467889999999887664 599999999999988764 21
Q ss_pred -CCEEEEEEcCCC---CEEEEEeCC-eEEEEECCCCeeEEEEccCCC-----------ce--------------------
Q 044075 677 -TEIHSVCWDTNG---EYLASVSQD-SVRVWSLASGECIHELSSSGN-----------KF-------------------- 720 (786)
Q Consensus 677 -~~I~sv~~spdg---~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~-----------~I-------------------- 720 (786)
.....+....+| .+++.++.+ .|+++|..+++.+..+..... ++
T Consensus 312 ~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G 391 (677)
T 1kb0_A 312 TQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYG 391 (677)
T ss_dssp CSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTC
T ss_pred CCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccc
Confidence 122233334477 678888888 999999999998877653211 11
Q ss_pred ----EEEEEeCCCCEEEEEECC-------------------------------------------CeEEEEECCCCeEEE
Q 044075 721 ----HSCIFHPSYPTLMVIGGY-------------------------------------------QSLELWNMAENKCMT 753 (786)
Q Consensus 721 ----~sv~fspdg~~L~sgs~d-------------------------------------------g~I~IwDl~~~~~~~ 753 (786)
..++|+|+...+++...+ +.|..||+.+++.+-
T Consensus 392 ~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W 471 (677)
T 1kb0_A 392 AHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW 471 (677)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE
T ss_pred ccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEe
Confidence 146889998888876532 689999999999886
Q ss_pred EcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 754 IAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 754 ~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
...+...+....+..++.+++.++.||.|++||
T Consensus 472 ~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 472 SVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp EEEESSSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred ecCCCCCCcCcceEeCCCEEEEECCCCcEEEEE
Confidence 556666666666777888999999999999986
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.15 E-value=2.7e-13 Score=149.29 Aligned_cols=202 Identities=10% Similarity=0.012 Sum_probs=115.2
Q ss_pred CCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCC-CeE
Q 044075 520 DGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNN-HVM 598 (786)
Q Consensus 520 dg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~-~V~ 598 (786)
++..|++++.||.|+.||..+++.+..+.. +.+.+..+..++..+++++.|+.|+.||..+++. +..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~-~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG-LTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CC-SEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCce-eeeeeccCccccc
Confidence 577899999999999999999999888766 4566666666777888888999999999988763 222222211 110
Q ss_pred -EEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCC
Q 044075 599 -SLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHST 677 (786)
Q Consensus 599 -sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~ 677 (786)
+..+. .+. .+++++.++.|+.||..+++.+..+.... ...++|++..+++++.++.|+.||.++++.+..+..+.
T Consensus 85 ~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~- 160 (369)
T 2hz6_A 85 ASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQQTLSSAF-ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD- 160 (369)
T ss_dssp TCSCC-------CCCCEEEEEEEEECCC-----------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred cCceEe-cCC-EEEEEeCCCEEEEEECCCCcEEEEecCCC-cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence 00111 223 34467789999999999988765554321 24456788899999999999999999998766554211
Q ss_pred CEEEEEEcCCC---CEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEE-EEEeCCCC
Q 044075 678 EIHSVCWDTNG---EYLASVSQD-SVRVWSLASGECIHELSSSGNKFHS-CIFHPSYP 730 (786)
Q Consensus 678 ~I~sv~~spdg---~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~s-v~fspdg~ 730 (786)
....+++.+. ..+++++.+ .|+.||.++++.+..+... .++.. ..+++++.
T Consensus 161 -~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 161 -YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA-SPVVAFYVWQREGL 216 (369)
T ss_dssp -ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS-SCEEEEEECTTSSC
T ss_pred -ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC-CceEEEEEecCCce
Confidence 1222333332 445666777 9999999999998887643 44433 34455554
No 225
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.15 E-value=7.9e-10 Score=121.93 Aligned_cols=168 Identities=12% Similarity=0.094 Sum_probs=131.8
Q ss_pred CeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe-------------eeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEE
Q 044075 596 HVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS-------------CARISKGGTVQVRFQPRLGLLLAAASENVVSIFD 662 (786)
Q Consensus 596 ~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~-------------~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD 662 (786)
.+..+++++....++ +|+.+ .+++|++.... ....... +..++| ++..|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~-a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFV-AASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEE-EEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEE-EeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 689999999877655 66655 56669865332 2223345 999999 88999988 889999999
Q ss_pred cCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeE
Q 044075 663 VETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSL 741 (786)
Q Consensus 663 ~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I 741 (786)
+++.........|...+.++.+.+.. +++++.| .|.+||+.++.... +...|++++|+|+| ++++..||.|
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred chhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 99887666677788889988876653 7777777 99999999887653 23589999999999 7889999999
Q ss_pred EEEECCCCeE--E-EE------c---ccCCCeEEEEEcCCCCEEEEEe
Q 044075 742 ELWNMAENKC--M-TI------A---AHDCVISALAQSPVTGMVASAS 777 (786)
Q Consensus 742 ~IwDl~~~~~--~-~~------~---~h~~~V~slafspdg~~LaSgs 777 (786)
++|+.....+ . ++ . +|...|.+|.|.+++.+|++-+
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9999988774 2 34 2 3788999999999998888733
No 226
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.13 E-value=1.4e-08 Score=111.02 Aligned_cols=253 Identities=10% Similarity=0.054 Sum_probs=166.0
Q ss_pred CCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCe--
Q 044075 520 DGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHV-- 597 (786)
Q Consensus 520 dg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V-- 597 (786)
++..|++++.++.|..+|..+++.+................ +..+++++.++.|..+|..+++. +..+.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~-~W~~~~~~~~~~~ 178 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAV-KWTVNLDMPSLSL 178 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCE-EEEEECCC-----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcE-EEEEeCCCCceee
Confidence 35578888899999999999999887665443222222222 45788888999999999988874 33332211110
Q ss_pred ---EEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeE-------E---EEEe--CCCCEEEEEECCCeEEEEE
Q 044075 598 ---MSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTV-------Q---VRFQ--PRLGLLLAAASENVVSIFD 662 (786)
Q Consensus 598 ---~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~-------~---i~~s--p~g~~Ll~gs~dg~I~iwD 662 (786)
...... +..+ +.+..++.|..+|..+++.......... . +... ..+..+++++.++.|..+|
T Consensus 179 ~~~~~~~~~--~~~v-~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d 255 (376)
T 3q7m_A 179 RGESAPTTA--FGAA-VVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALD 255 (376)
T ss_dssp CCCCCCEEE--TTEE-EECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEE
T ss_pred cCCCCcEEE--CCEE-EEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEE
Confidence 122222 3344 4677789999999998887654432110 0 0011 1357788888899999999
Q ss_pred cCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC-CCceEEEEEeCCCCEEEEEECCCe
Q 044075 663 VETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS-GNKFHSCIFHPSYPTLMVIGGYQS 740 (786)
Q Consensus 663 ~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~-~~~I~sv~fspdg~~L~sgs~dg~ 740 (786)
.++++.+..... .....+.. ++..|++++.+ .|..+|..+++.+...... ...+....+. +..|++++.+|.
T Consensus 256 ~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g~ 329 (376)
T 3q7m_A 256 LRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEGY 329 (376)
T ss_dssp TTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTSE
T ss_pred CCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCCe
Confidence 999988876652 23444444 35567777777 9999999999988777522 2223333332 467899999999
Q ss_pred EEEEECCCCeEEEEc-ccCCCeE-EEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 741 LELWNMAENKCMTIA-AHDCVIS-ALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 741 I~IwDl~~~~~~~~~-~h~~~V~-slafspdg~~LaSgs~DG~I~IWd 786 (786)
|++||..+++.+... .....+. ..... +..|+.++.||.|..||
T Consensus 330 l~~~d~~tG~~~~~~~~~~~~~~~~~~~~--~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 330 LHWINVEDGRFVAQQKVDSSGFQTEPVAA--DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEEETTTCCEEEEEECCTTCBCSCCEEE--TTEEEEEBTTSCEEEEE
T ss_pred EEEEECCCCcEEEEEecCCCcceeCCEEE--CCEEEEEeCCCEEEEEe
Confidence 999999999877433 2223332 22222 55788899999999885
No 227
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.13 E-value=9.3e-08 Score=99.34 Aligned_cols=245 Identities=9% Similarity=-0.040 Sum_probs=160.8
Q ss_pred CEEEEEECCCeEEEEEcCCCeee-----eecCCCCCCeEEEEEccCCCEEEEEe-CCCcEEEEcCCCCcceeeeecCCCC
Q 044075 522 KLLASAGHDKKVVVWNMENFQTE-----CTPDDHNHIITDVRFRPNSTQLATSS-FDKTVRIWDAAKPNFCLQTYTGHNN 595 (786)
Q Consensus 522 ~~Lasgs~Dg~V~IWdl~t~~~~-----~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~I~VWdl~s~~~~~~~~~~h~~ 595 (786)
.+|+.+. .+.|+.++++..... ..+......+..++|++++..|+.+. .++.|.++++.... ..........
T Consensus 2 ~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~ 79 (267)
T 1npe_A 2 THLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-PTTIIRQDLG 79 (267)
T ss_dssp EEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-CEEEECTTCC
T ss_pred cEEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC-cEEEEECCCC
Confidence 4555554 347888888754321 11211224578999999766665554 46899999987654 2223322235
Q ss_pred CeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECC---CeEEEEEcCCCcEE
Q 044075 596 HVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASE---NVVSIFDVETDRLT 669 (786)
Q Consensus 596 ~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~d---g~I~iwD~~t~~~i 669 (786)
....+++++++..++++....+.|.++++.......... .....++++++++.|+++... +.|..+++......
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~ 159 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR 159 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE
Confidence 688999999888888888888999999987543322222 456789999988877777653 68888988654322
Q ss_pred EEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEEC-CCeEEEEEC
Q 044075 670 HSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGG-YQSLELWNM 746 (786)
Q Consensus 670 ~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl 746 (786)
............+++++++..|+.+... .|.++|+........+.. ......+++. +..|+++.. .+.|.++|.
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEET
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeC
Confidence 2222233567899999988777666654 899999976544333332 2334566654 456666664 579999999
Q ss_pred CCCeEEEEcc-cC-CCeEEEEEcCCCC
Q 044075 747 AENKCMTIAA-HD-CVISALAQSPVTG 771 (786)
Q Consensus 747 ~~~~~~~~~~-h~-~~V~slafspdg~ 771 (786)
.+++.+.... .. .....+++.|++.
T Consensus 237 ~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 237 AISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCCceEEEccccccccceeeecCccC
Confidence 9888764432 22 2477888888764
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.11 E-value=8.5e-10 Score=121.14 Aligned_cols=242 Identities=9% Similarity=-0.026 Sum_probs=161.3
Q ss_pred eEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe----------CCCcEEEEcCCCCcceeeeecCC-------C
Q 044075 532 KVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS----------FDKTVRIWDAAKPNFCLQTYTGH-------N 594 (786)
Q Consensus 532 ~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs----------~Dg~I~VWdl~s~~~~~~~~~~h-------~ 594 (786)
.|.++|..+++.+.++..-..+ .+.++||+++++++. .++.|.+||+.+.+. +..+.-. .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v-v~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP-IADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE-EEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE-EEEEECCCccccccC
Confidence 8899999999999998655555 799999999998886 368899999999874 4444322 1
Q ss_pred CCeEEEEEecCCCeEEEEEcC-CCcEEE--EeCCCCeeeEeec-CCeEEEEEeCCC-CEEEEEECCCeEEEEEcCC----
Q 044075 595 NHVMSLDFHPKKNDLFCSCDG-NSEIRF--WNLSQYSCARISK-GGTVQVRFQPRL-GLLLAAASENVVSIFDVET---- 665 (786)
Q Consensus 595 ~~V~sl~~sp~g~~ll~sgs~-Dg~I~i--wDl~~~~~~~~~~-~~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t---- 665 (786)
.....+.++|++++++++... +..|.+ +|..+ +.... ... +.+.|++ ..+++.+.|+.+.+.|+++
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~--~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~ 198 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC--FHIHPGAAATHYLGSCPASLAASDLAAAPAA 198 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC--CCCEEEETTEEECCCCTTSCEEEECCSSCCC
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc--eEEccCCCeEEEEEcCCCCEEEEECcccccc
Confidence 245689999999999876644 467888 99877 22222 111 1223444 3455566788888899887
Q ss_pred -CcEEEE----EecCCCCEEEEEEcCCCCE-EEEEeCCeEEEEECCCC--eeEEEEccCC----------CceEEEEEeC
Q 044075 666 -DRLTHS----FKGHSTEIHSVCWDTNGEY-LASVSQDSVRVWSLASG--ECIHELSSSG----------NKFHSCIFHP 727 (786)
Q Consensus 666 -~~~i~~----l~~h~~~I~sv~~spdg~~-Lasgs~D~I~vwDl~s~--~~i~~l~~~~----------~~I~sv~fsp 727 (786)
++.+.. +.....+. . .+++.. +++.. +.|.+.|+... +.+..+.... .....+.++|
T Consensus 199 ~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~ 273 (368)
T 1mda_H 199 AGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK 273 (368)
T ss_dssp CEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEET
T ss_pred CCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcC
Confidence 332211 11112333 3 444444 44444 88899998653 2333322110 1112268999
Q ss_pred CCCEEEEEEC---------CCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCC-EEEEEe-CCCcEEEeC
Q 044075 728 SYPTLMVIGG---------YQSLELWNMAENKCMTIAAHDCVISALAQSPVTG-MVASAS-HDKSVKIWK 786 (786)
Q Consensus 728 dg~~L~sgs~---------dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~-~LaSgs-~DG~I~IWd 786 (786)
+++.++++.. ++.+.++|+.+.+.+....-.....+++|+||++ +++++. .++.|.|+|
T Consensus 274 dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 274 NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 9998887643 2466799999998875444344689999999998 566666 589999986
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.11 E-value=3.4e-08 Score=107.87 Aligned_cols=253 Identities=7% Similarity=0.023 Sum_probs=164.2
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCC---------CCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeec
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDH---------NHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYT 591 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h---------~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~ 591 (786)
+..|++++.++.|..||..+++.+..+... ...+.+.. ..++..+++++.++.|..+|..+++. +....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG~~-~W~~~ 130 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDGTV-AWQTK 130 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTCCE-EEEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCCCE-EEEEe
Confidence 567888888999999999999887665442 12232222 22456788889999999999998874 33333
Q ss_pred CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCC--e------EEEEEeCCCCEEEEEECCCeEEEEEc
Q 044075 592 GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGG--T------VQVRFQPRLGLLLAAASENVVSIFDV 663 (786)
Q Consensus 592 ~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~--i------~~i~~sp~g~~Ll~gs~dg~I~iwD~ 663 (786)
............ +..+ +.++.++.|..+|..+++.+...... . ...... +..+++++.++.|..+|.
T Consensus 131 ~~~~~~~~p~~~--~~~v-~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 131 VAGEALSRPVVS--DGLV-LIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp CSSCCCSCCEEE--TTEE-EEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEET
T ss_pred CCCceEcCCEEE--CCEE-EEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEEC
Confidence 222211222222 3344 46777999999999988876554421 1 111222 467888888999999999
Q ss_pred CCCcEEEEEecCCCC----EE---EEEEcC--CCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEE
Q 044075 664 ETDRLTHSFKGHSTE----IH---SVCWDT--NGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLM 733 (786)
Q Consensus 664 ~t~~~i~~l~~h~~~----I~---sv~~sp--dg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~ 733 (786)
++++.+......... +. .+...| .+..+++++.+ .|..+|.++++.+..... .....+.. ++..++
T Consensus 206 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~ 281 (376)
T 3q7m_A 206 EQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIY 281 (376)
T ss_dssp TTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEE
T ss_pred CCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEE
Confidence 999988776532110 00 011111 24566667766 999999999998877653 23444444 366889
Q ss_pred EEECCCeEEEEECCCCeEEEEcc--cCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 734 VIGGYQSLELWNMAENKCMTIAA--HDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 734 sgs~dg~I~IwDl~~~~~~~~~~--h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+++.++.|..+|..+++.+.... ....+...... +..|+.++.+|.|.+||
T Consensus 282 ~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 282 LVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp EEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTSEEEEEE
T ss_pred EEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCCeEEEEE
Confidence 99999999999999998763332 22233333333 56788888888888775
No 230
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.10 E-value=2.6e-09 Score=113.69 Aligned_cols=256 Identities=9% Similarity=-0.010 Sum_probs=166.7
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeee
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTY 590 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~ 590 (786)
.+.++.+.++|. |++++.+ |..||. +++....+......+....+. +..|++++.++.|..+|.. ++ .....
T Consensus 61 ~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~-~~~~~ 132 (330)
T 3hxj_A 61 IECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GT-EKWRF 132 (330)
T ss_dssp EEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SC-EEEEE
T ss_pred cccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CC-EEEEE
Confidence 456777777775 4444444 888885 555555444333333334443 5568888889999999988 55 34444
Q ss_pred cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCc
Q 044075 591 TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDR 667 (786)
Q Consensus 591 ~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~ 667 (786)
..+...+.++...+++. ++ .++.++.|..||.. ++...... ..+..+.+..++. +++++ +.|..+| .+++
T Consensus 133 ~~~~~~~~~~~~~~~g~-l~-vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t--~~l~~~d-~~g~ 205 (330)
T 3hxj_A 133 KTKKAIYATPIVSEDGT-IY-VGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS--DKVYAIN-PDGT 205 (330)
T ss_dssp ECSSCCCSCCEECTTSC-EE-EECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES--SSEEEEC-TTSC
T ss_pred cCCCceeeeeEEcCCCE-EE-EEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe--CEEEEEC-CCCc
Confidence 44445566677766655 44 56678999999998 65543332 3344556666665 44444 8899999 7777
Q ss_pred EEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 668 LTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 668 ~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
.+..+......+.++..+++|.+++....+.|..+|. +++.+..+......+..+.+.+++ .|++++.++.|..+|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~- 282 (330)
T 3hxj_A 206 EKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP- 282 (330)
T ss_dssp EEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-
T ss_pred EEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-
Confidence 7777766666788888888887665444448888874 566666665544444455665555 5778888889999997
Q ss_pred CCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 748 ENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 748 ~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
+++.+ ........+.++...+++. |+.++.+|.|++.
T Consensus 283 ~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 283 DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYAL 320 (330)
T ss_dssp TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEE
T ss_pred CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEE
Confidence 55544 4444456677888877775 5568889998874
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.05 E-value=1.6e-08 Score=120.15 Aligned_cols=252 Identities=9% Similarity=0.046 Sum_probs=169.1
Q ss_pred CCCEEEEEECCCeEEEEEcCCCeeeeecCCC-C----CCeEEEEEccCCCEEEEEeC------CCcEEEEcCCCCcceee
Q 044075 520 DGKLLASAGHDKKVVVWNMENFQTECTPDDH-N----HIITDVRFRPNSTQLATSSF------DKTVRIWDAAKPNFCLQ 588 (786)
Q Consensus 520 dg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h-~----~~V~sl~fspdg~~Lasgs~------Dg~I~VWdl~s~~~~~~ 588 (786)
++..|++++.|+.|..+|..+++.+..+..+ . ..+.+.-.. .+..+++++. ++.|+.||..+++. +.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~-~W 204 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGER-KW 204 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCE-EE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcE-EE
Confidence 3567888889999999999999998877654 1 122211111 1345555543 78999999999874 32
Q ss_pred eecCCC--------------------------------CCeEEEEEecCCCeEEEEEcCCC-------------------
Q 044075 589 TYTGHN--------------------------------NHVMSLDFHPKKNDLFCSCDGNS------------------- 617 (786)
Q Consensus 589 ~~~~h~--------------------------------~~V~sl~~sp~g~~ll~sgs~Dg------------------- 617 (786)
.+.... .....++++|+++.+++ +..++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~-~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYV-GTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEE-ECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEE-ECCCCccccCCCCCccCCCCeeeE
Confidence 222111 11135788888776664 44332
Q ss_pred cEEEEeCCCCeeeEeecC------------CeEEEEEeCCC---CEEEEEECCCeEEEEEcCCCcEEEEEecCC------
Q 044075 618 EIRFWNLSQYSCARISKG------------GTVQVRFQPRL---GLLLAAASENVVSIFDVETDRLTHSFKGHS------ 676 (786)
Q Consensus 618 ~I~iwDl~~~~~~~~~~~------------~i~~i~~sp~g---~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~------ 676 (786)
.|..+|.++++.+-.+.. ....+....+| ..+++++.+|.|+++|.++++++..+....
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 599999999887755431 12223344466 678888999999999999999987765321
Q ss_pred -----CCE------------------------EEEEEcCCCCEEEEEeC-------------------------------
Q 044075 677 -----TEI------------------------HSVCWDTNGEYLASVSQ------------------------------- 696 (786)
Q Consensus 677 -----~~I------------------------~sv~~spdg~~Lasgs~------------------------------- 696 (786)
..+ ..++|+|+..++++...
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 111 14688898888777532
Q ss_pred -------------CeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEc--ccCCCe
Q 044075 697 -------------DSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIA--AHDCVI 761 (786)
Q Consensus 697 -------------D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~--~h~~~V 761 (786)
+.|..||+.+++.+..+... .++....+...+..+++++.|+.|++||..+++.+... .+....
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~ 522 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVA 522 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred cccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCccc
Confidence 26999999999998887643 34455566777888999999999999999999987433 333333
Q ss_pred EEEEEcCCCCEEEE
Q 044075 762 SALAQSPVTGMVAS 775 (786)
Q Consensus 762 ~slafspdg~~LaS 775 (786)
.-+.|..+|+.+++
T Consensus 523 ~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 523 APSTYMVDGRQYVS 536 (677)
T ss_dssp CCEEEEETTEEEEE
T ss_pred CCEEEEeCCEEEEE
Confidence 44566678874443
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.03 E-value=3e-09 Score=113.20 Aligned_cols=254 Identities=9% Similarity=-0.005 Sum_probs=167.0
Q ss_pred EEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCC
Q 044075 515 CHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHN 594 (786)
Q Consensus 515 lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~ 594 (786)
+.+..++. |++++.++.|..|| .+++....+..+...+.++...+++. |++++.+ |..||. +++. ...+....
T Consensus 25 ~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~-~~~~~~~~ 97 (330)
T 3hxj_A 25 PILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTE-KWRFDTKK 97 (330)
T ss_dssp CEECTTSC-EECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGG-GGGSCC--
T ss_pred ceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcE-EEEEECCC
Confidence 34445554 56666788899999 88887776655555567777776664 5555554 888886 4432 22222222
Q ss_pred CCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEE
Q 044075 595 NHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHS 671 (786)
Q Consensus 595 ~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~ 671 (786)
.......+. +..++ .++.++.|..+|.. ++...... ..+..+...+++. +++++.++.|..||.. ++.+..
T Consensus 98 ~~~~~~~~~--~~~l~-v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~ 171 (330)
T 3hxj_A 98 AIVSDFTIF--EDILY-VTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWR 171 (330)
T ss_dssp ---CCEEEE--TTEEE-EECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEE
T ss_pred CcccCceEE--CCEEE-EEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEE
Confidence 223333333 34444 56678999999988 55443332 2234455555555 6778888999999999 877777
Q ss_pred EecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeE
Q 044075 672 FKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKC 751 (786)
Q Consensus 672 l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~ 751 (786)
+......+.++.+.+++.+++.. +.|..|| .+++.+..+......+.++.+.+++. |++++.++.|..+|......
T Consensus 172 ~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g~~~ 247 (330)
T 3hxj_A 172 FKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDGTEK 247 (330)
T ss_dssp EECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTSCEE
T ss_pred EecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCCCEe
Confidence 76556667778888888866554 8899999 77877777766666788888888775 67777888899998644444
Q ss_pred EEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 752 MTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 752 ~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.........+.++.+.+++ .|+.++.+|.|..+|
T Consensus 248 ~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 248 WRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAIN 281 (330)
T ss_dssp EEEECSSCCCSCCEECTTS-CEEEECTTCEEEEEC
T ss_pred EEeeCCCCccccceEcCCC-eEEEecCCCCEEEEC
Confidence 4444444445556666555 566677787777764
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.01 E-value=3.6e-08 Score=117.33 Aligned_cols=252 Identities=11% Similarity=0.059 Sum_probs=164.4
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCC--CCCeEEEEEcc---CCCEEEEEe------CCCcEEEEcCCCCcceeee
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDH--NHIITDVRFRP---NSTQLATSS------FDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h--~~~V~sl~fsp---dg~~Lasgs------~Dg~I~VWdl~s~~~~~~~ 589 (786)
+..|++++.|+.|+.+|..+++.+-.+... ......+..+| ++ .+++++ .++.|+.||..+++. +..
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~-~W~ 198 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKE-AWR 198 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCE-EEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcE-EEE
Confidence 567888889999999999999988766432 11111111122 44 444443 378999999999884 322
Q ss_pred ecC-------------------------------CCCCeEEEEEecCCCeEEEEEcCCC-------------------cE
Q 044075 590 YTG-------------------------------HNNHVMSLDFHPKKNDLFCSCDGNS-------------------EI 619 (786)
Q Consensus 590 ~~~-------------------------------h~~~V~sl~~sp~g~~ll~sgs~Dg-------------------~I 619 (786)
+.. +......+++.|+.+.++ .+..++ .|
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy-~~~~~g~~w~~~~~~~~~gd~~y~~~v 277 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLY-IGVGNGSLWDPKWRSQAKGDNLFLSSI 277 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEE-EECCCEESSCHHHHHTTCSCCTTTTEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEE-EeCCCCCccccCCCCCCCCCceeeeeE
Confidence 221 001112578888776555 565554 49
Q ss_pred EEEeCCCCeeeEeecC------------CeEEEEEeCCCC---EEEEEECCCeEEEEEcCCCcEEEEEecCC-CCE----
Q 044075 620 RFWNLSQYSCARISKG------------GTVQVRFQPRLG---LLLAAASENVVSIFDVETDRLTHSFKGHS-TEI---- 679 (786)
Q Consensus 620 ~iwDl~~~~~~~~~~~------------~i~~i~~sp~g~---~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~-~~I---- 679 (786)
..||.++++.+-.+.. .........++. .+++++.+|.|+++|.++++++....... ...
T Consensus 278 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~ 357 (689)
T 1yiq_A 278 VAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMD 357 (689)
T ss_dssp EEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEE
T ss_pred EEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccC
Confidence 9999999987765431 112222233554 68888899999999999999885443211 011
Q ss_pred ----------------------------------EEEEEcCCCCEEEEEeC-----------------------------
Q 044075 680 ----------------------------------HSVCWDTNGEYLASVSQ----------------------------- 696 (786)
Q Consensus 680 ----------------------------------~sv~~spdg~~Lasgs~----------------------------- 696 (786)
..++|+|+..++++...
T Consensus 358 ~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 437 (689)
T 1yiq_A 358 MKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTG 437 (689)
T ss_dssp TTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEEC
T ss_pred ccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccc
Confidence 12678888887776521
Q ss_pred ----------------C-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEE-Ec-cc
Q 044075 697 ----------------D-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMT-IA-AH 757 (786)
Q Consensus 697 ----------------D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~-~~-~h 757 (786)
+ .|+.||+.+++.+..+..+. ++....+...+..+++++.|+.|+.||.++++.+. +. .+
T Consensus 438 ~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~ 516 (689)
T 1yiq_A 438 MMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAAS 516 (689)
T ss_dssp CCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCC
Confidence 2 69999999999988876553 33334566678899999999999999999999873 33 22
Q ss_pred CCCeEEEEEcCCCC-EEEEE
Q 044075 758 DCVISALAQSPVTG-MVASA 776 (786)
Q Consensus 758 ~~~V~slafspdg~-~LaSg 776 (786)
.....-+.|..+|+ |+++.
T Consensus 517 ~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 517 GVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp CCCSCCEEEEETTEEEEEEE
T ss_pred CcccCceEEEECCEEEEEEE
Confidence 22234466777887 44443
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.98 E-value=2.1e-07 Score=103.36 Aligned_cols=219 Identities=9% Similarity=0.056 Sum_probs=149.6
Q ss_pred EEc--CCCCEEEEE-ECCCeEEEEEcCCC----eeeeecC------C-CCCCeEEEEEccCCCEEEEEeCC------CcE
Q 044075 516 HFS--SDGKLLASA-GHDKKVVVWNMENF----QTECTPD------D-HNHIITDVRFRPNSTQLATSSFD------KTV 575 (786)
Q Consensus 516 afS--pdg~~Lasg-s~Dg~V~IWdl~t~----~~~~~l~------~-h~~~V~sl~fspdg~~Lasgs~D------g~I 575 (786)
.++ .++++|++. ..++.|.|+|+.+. +.+++++ . -...-..+...|++ +++++..+ +.|
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 446 788877664 46788999999755 6666663 1 11244567888999 77766555 789
Q ss_pred EEEcCCCCcceeeeecC--CC-CCeEEEEEecCCCeEEEEE------------------cCCCcEEEEeCCCCeeeEeec
Q 044075 576 RIWDAAKPNFCLQTYTG--HN-NHVMSLDFHPKKNDLFCSC------------------DGNSEIRFWNLSQYSCARISK 634 (786)
Q Consensus 576 ~VWdl~s~~~~~~~~~~--h~-~~V~sl~~sp~g~~ll~sg------------------s~Dg~I~iwDl~~~~~~~~~~ 634 (786)
.++|..+.+ ++..+.. .. ..-..+-|+|+++.++.+- ..+.+|.+||+.+.+.+..+.
T Consensus 167 ~vlD~~T~~-v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 167 LMLDHYSFE-PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp EEECTTTCC-EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred EEEECCCCe-EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence 999999877 3444432 11 2234688899998666332 236899999999887766555
Q ss_pred C-----CeEEEEE--eCCCCEEEEEEC------CCeEEEEEcCCCcE--EEEE--ecC----------------CCCEEE
Q 044075 635 G-----GTVQVRF--QPRLGLLLAAAS------ENVVSIFDVETDRL--THSF--KGH----------------STEIHS 681 (786)
Q Consensus 635 ~-----~i~~i~~--sp~g~~Ll~gs~------dg~I~iwD~~t~~~--i~~l--~~h----------------~~~I~s 681 (786)
- ....+.| +|+++++++++. ++.|.+|..+.++. ...+ ... ......
T Consensus 246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~ 325 (462)
T 2ece_A 246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTD 325 (462)
T ss_dssp SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCC
T ss_pred cCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeE
Confidence 3 2344555 999999888885 46888776655421 1111 110 234678
Q ss_pred EEEcCCCCEEEEEeCC--eEEEEECCC---CeeEEEEccCCC--------------ceEEEEEeCCCCEEEEEE
Q 044075 682 VCWDTNGEYLASVSQD--SVRVWSLAS---GECIHELSSSGN--------------KFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 682 v~~spdg~~Lasgs~D--~I~vwDl~s---~~~i~~l~~~~~--------------~I~sv~fspdg~~L~sgs 736 (786)
|.+++||++|+++..+ .|.+||+.. .+.+..+..... .-..+.++|+|++|+++.
T Consensus 326 I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 326 IDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999999998876 899999863 355555543311 257899999999999998
No 235
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.98 E-value=2.1e-07 Score=103.31 Aligned_cols=218 Identities=10% Similarity=0.014 Sum_probs=148.1
Q ss_pred EEc--cCCCEEEEE-eCCCcEEEEcCCCCc---ceeeeec------C-CCCCeEEEEEecCCCeEEEEEcCC------Cc
Q 044075 558 RFR--PNSTQLATS-SFDKTVRIWDAAKPN---FCLQTYT------G-HNNHVMSLDFHPKKNDLFCSCDGN------SE 618 (786)
Q Consensus 558 ~fs--pdg~~Lasg-s~Dg~I~VWdl~s~~---~~~~~~~------~-h~~~V~sl~~sp~g~~ll~sgs~D------g~ 618 (786)
.++ ++.++|++. ..++.|+|+|+.+.. ....++. . .......+...|++ +++++..+ +.
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~ 165 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGG 165 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCe
Confidence 346 777777665 457889999997541 1233331 1 11234567778988 55566555 78
Q ss_pred EEEEeCCCCeeeEeecCC------eEEEEEeCCCCEEEEEE-------------------CCCeEEEEEcCCCcEEEEEe
Q 044075 619 IRFWNLSQYSCARISKGG------TVQVRFQPRLGLLLAAA-------------------SENVVSIFDVETDRLTHSFK 673 (786)
Q Consensus 619 I~iwDl~~~~~~~~~~~~------i~~i~~sp~g~~Ll~gs-------------------~dg~I~iwD~~t~~~i~~l~ 673 (786)
|.++|..+.+.+...... ...+-|+|+++.+++.. .+..|.+||+.+++.+.++.
T Consensus 166 v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 166 ILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp EEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence 999999999988776522 34578899999888774 36899999999998888877
Q ss_pred cC--CCCEEEEEE--cCCCCEEEEEeC-----C--eEEEEECCCCe--eEEEE--ccC----------------CCceEE
Q 044075 674 GH--STEIHSVCW--DTNGEYLASVSQ-----D--SVRVWSLASGE--CIHEL--SSS----------------GNKFHS 722 (786)
Q Consensus 674 ~h--~~~I~sv~~--spdg~~Lasgs~-----D--~I~vwDl~s~~--~i~~l--~~~----------------~~~I~s 722 (786)
.- ......|.| +|++++++++++ . +|.+|....++ .+..+ ... ......
T Consensus 246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~ 325 (462)
T 2ece_A 246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTD 325 (462)
T ss_dssp SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCC
T ss_pred cCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeE
Confidence 42 123455656 999999888876 4 67776655442 11211 110 234678
Q ss_pred EEEeCCCCEEEEEEC-CCeEEEEECCCC---eEEEEcccC---------------CCeEEEEEcCCCCEEEEEe
Q 044075 723 CIFHPSYPTLMVIGG-YQSLELWNMAEN---KCMTIAAHD---------------CVISALAQSPVTGMVASAS 777 (786)
Q Consensus 723 v~fspdg~~L~sgs~-dg~I~IwDl~~~---~~~~~~~h~---------------~~V~slafspdg~~LaSgs 777 (786)
+.+++|+++|+++.. .+.|.+||+.+. +.+....-. ..-..++++|||++|+++.
T Consensus 326 I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 326 IDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999999999988876 569999998632 333222111 1357899999999999887
No 236
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.96 E-value=1.2e-08 Score=110.55 Aligned_cols=225 Identities=9% Similarity=-0.032 Sum_probs=148.1
Q ss_pred cCCCCeEEEEEcCCCCEEEEEEC-----CCeEEEEEcCCCeeeeecCC------CCCCeEEEEEccCCCEE-EEEe---C
Q 044075 507 KSSSKVTCCHFSSDGKLLASAGH-----DKKVVVWNMENFQTECTPDD------HNHIITDVRFRPNSTQL-ATSS---F 571 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs~-----Dg~V~IWdl~t~~~~~~l~~------h~~~V~sl~fspdg~~L-asgs---~ 571 (786)
.|-..+.+++|+++++++++-.. ++.|.+||+.+++.+..+.. +...+..+++++++..+ ++.. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 46678999999999886665543 57899999999887665532 23457899999865555 4444 5
Q ss_pred CCcEEEEcCCCCcceeeeecCCCCCeE-EEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEE
Q 044075 572 DKTVRIWDAAKPNFCLQTYTGHNNHVM-SLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLL 650 (786)
Q Consensus 572 Dg~I~VWdl~s~~~~~~~~~~h~~~V~-sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll 650 (786)
++.|.+||+.+++ ..+.+.+|..... ...+.+++. .+.+.+.++.++.|. ..+..++|+|+++.|+
T Consensus 144 ~~~i~v~d~~~g~-~~r~~~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~~~~~-----------~~~~gia~s~dg~~ly 210 (343)
T 2qe8_A 144 KAALIRVDLQTGL-AARVLQGYPGIAPEDIDLVIDGV-PVQIGQPDGTVIRPH-----------LGVNGIVLDAENEWLY 210 (343)
T ss_dssp GCEEEEEETTTCC-EEEECTTCTTTSCCSCCCEETTE-ECBEECTTSCEECCC-----------CCEEEEEECTTSCEEE
T ss_pred CCeEEEEECCCCC-EEEEecCCCcccccccceeECCE-EEEeccCCCceecee-----------cccceeEeccCCCEEE
Confidence 7899999998766 3444544422111 133344443 344566777776653 2456799999999998
Q ss_pred EEECCC-eEEEEEcC---CCc-----EEE--EEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccC-C
Q 044075 651 AAASEN-VVSIFDVE---TDR-----LTH--SFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSS-G 717 (786)
Q Consensus 651 ~gs~dg-~I~iwD~~---t~~-----~i~--~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~-~ 717 (786)
++...+ .|+.++.. .+. ... ...++......++++++|.++++...+ .|.+||..+++........ .
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~ 290 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKL 290 (343)
T ss_dssp EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGG
T ss_pred EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCce
Confidence 888765 66666642 111 000 111233456679999999988888777 9999998666643333222 3
Q ss_pred CceEEEEEeCCCCEEEEEECCCeEEEE
Q 044075 718 NKFHSCIFHPSYPTLMVIGGYQSLELW 744 (786)
Q Consensus 718 ~~I~sv~fspdg~~L~sgs~dg~I~Iw 744 (786)
....+++|.+++..+++.+..+.+.+|
T Consensus 291 ~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 291 SWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp SCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred ecCCeeEECCCCcEEEEeCcccccccc
Confidence 468899999998877776655444333
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.96 E-value=3.4e-10 Score=124.46 Aligned_cols=199 Identities=9% Similarity=0.029 Sum_probs=112.5
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeE---
Q 044075 562 NSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTV--- 638 (786)
Q Consensus 562 dg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~--- 638 (786)
++..|++++.|+.|+.||..+++. +..+.. ..+.+..+..++. ++++++.|+.|+.||..+++.+........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~-~W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI-KWTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE-EEEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE-EEEecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 577899999999999999999874 444443 4455555555554 455778899999999988776544332110
Q ss_pred --EEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc
Q 044075 639 --QVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS 715 (786)
Q Consensus 639 --~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~ 715 (786)
...+ ..+..+++++.++.|+.||.++++.+..+..+. .+.++|++..+++++.+ .|+.||.++++.+..+..
T Consensus 84 ~~sp~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 84 QASPCR-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred ccCceE-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 0111 135678888889999999999999888776543 23456788888888887 999999999987665542
Q ss_pred CCCceEEEEEeCCC---CEEEEEECCCeEEEEECCCCeEEEEcccCCCeEE-EEEcCCCC
Q 044075 716 SGNKFHSCIFHPSY---PTLMVIGGYQSLELWNMAENKCMTIAAHDCVISA-LAQSPVTG 771 (786)
Q Consensus 716 ~~~~I~sv~fspdg---~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V~s-lafspdg~ 771 (786)
.. ....++..+. ..+++++.++.|+.||..+++.+.......++.. ..+++++.
T Consensus 159 ~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 159 FD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGL 216 (369)
T ss_dssp EE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSC
T ss_pred cc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCce
Confidence 21 1222333332 5688889999999999999988755545555544 34445553
No 238
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.94 E-value=1.5e-07 Score=111.65 Aligned_cols=262 Identities=12% Similarity=0.103 Sum_probs=172.1
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCC----------e-EEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeee
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHNHI----------I-TDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~----------V-~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~ 589 (786)
+..|++++.++.|..+|..+++.+-.+...... + ..+.+ .+..|++++.|+.|..+|..+++.+-..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 557777888999999999999988777543211 1 11222 2557888889999999999998843222
Q ss_pred ecCCC---CCeEE-EEEecCCCeEEEEEcC-----CCcEEEEeCCCCeeeEeecCC------------------------
Q 044075 590 YTGHN---NHVMS-LDFHPKKNDLFCSCDG-----NSEIRFWNLSQYSCARISKGG------------------------ 636 (786)
Q Consensus 590 ~~~h~---~~V~s-l~~sp~g~~ll~sgs~-----Dg~I~iwDl~~~~~~~~~~~~------------------------ 636 (786)
..... ..+.+ ..+. +..+++.++. +|.|+.+|..+++.+-.+...
T Consensus 144 ~~~~~~~~~~~~~~P~v~--~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVV--KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp ECSCTTSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred ccCCCCCcceecCCCEEE--CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 22111 11111 1111 3445533332 589999999998876544310
Q ss_pred ----------eEEEEEeCCCCEEEEEECCC-------------------eEEEEEcCCCcEEEEEec--CC-------CC
Q 044075 637 ----------TVQVRFQPRLGLLLAAASEN-------------------VVSIFDVETDRLTHSFKG--HS-------TE 678 (786)
Q Consensus 637 ----------i~~i~~sp~g~~Ll~gs~dg-------------------~I~iwD~~t~~~i~~l~~--h~-------~~ 678 (786)
...+++.++.+.+++++.++ .|..+|.++++.+..+.. |. .+
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~ 301 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQ 301 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCC
Confidence 01367888888998888765 399999999999988874 22 23
Q ss_pred EEEEEEcCCCC---EEEEEeCC-eEEEEECCCCeeEEEEccCC------------Cce----------------------
Q 044075 679 IHSVCWDTNGE---YLASVSQD-SVRVWSLASGECIHELSSSG------------NKF---------------------- 720 (786)
Q Consensus 679 I~sv~~spdg~---~Lasgs~D-~I~vwDl~s~~~i~~l~~~~------------~~I---------------------- 720 (786)
+....+..+|+ +++.++.+ .++++|..+|+.+..+.... .++
T Consensus 302 ~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~ 381 (668)
T 1kv9_A 302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAH 381 (668)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSS
T ss_pred cEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCcccc
Confidence 33333334665 67778777 99999999999885443221 000
Q ss_pred --EEEEEeCCCCEEEEEE------------------------------------CCCeEEEEECCCCeEEEEcccCCCeE
Q 044075 721 --HSCIFHPSYPTLMVIG------------------------------------GYQSLELWNMAENKCMTIAAHDCVIS 762 (786)
Q Consensus 721 --~sv~fspdg~~L~sgs------------------------------------~dg~I~IwDl~~~~~~~~~~h~~~V~ 762 (786)
..++++|+...+++.. .+|.|..||+.+++.+-...+...+.
T Consensus 382 ~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~ 461 (668)
T 1kv9_A 382 NWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWN 461 (668)
T ss_dssp CSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCC
T ss_pred CCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCc
Confidence 1257788777666522 23789999999999874444444444
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 763 ALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 763 slafspdg~~LaSgs~DG~I~IWd 786 (786)
...+...+.+|+.++.||.|++||
T Consensus 462 ~~~~~t~gg~vf~g~~dg~l~a~d 485 (668)
T 1kv9_A 462 GGTLSTAGNLVFQGTAAGQMHAYS 485 (668)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEE
T ss_pred CceeEeCCCEEEEECCcccchhhh
Confidence 444455678899999999999986
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.92 E-value=2.3e-07 Score=96.84 Aligned_cols=203 Identities=11% Similarity=0.068 Sum_probs=144.7
Q ss_pred eeeeecCCCC--CCeEEEEEccCCCEEEEEeC--CCcEEEEcCCCCcceeeeec-CCCCCeEEEEEecCCCeEEEEEcCC
Q 044075 542 QTECTPDDHN--HIITDVRFRPNSTQLATSSF--DKTVRIWDAAKPNFCLQTYT-GHNNHVMSLDFHPKKNDLFCSCDGN 616 (786)
Q Consensus 542 ~~~~~l~~h~--~~V~sl~fspdg~~Lasgs~--Dg~I~VWdl~s~~~~~~~~~-~h~~~V~sl~~sp~g~~ll~sgs~D 616 (786)
+.+.++. |. .....+.|++++.++++.+. ++.|+++|+.+++. +..+. +.......+++. ++.++++.-.+
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v-~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKV-ENIHKMDDSYFGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCE-EEEEECCTTCCEEEEEEE--TTEEEEEETTC
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCE-EEEEecCCCcceEEEEEe--CCEEEEEEecC
Confidence 3445552 33 24689999998644444443 57999999999884 43332 222233455555 67888888889
Q ss_pred CcEEEEeCCCCeeeEeecCC-eEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecC--C---CCEEEEEEcCCCCE
Q 044075 617 SEIRFWNLSQYSCARISKGG-TVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGH--S---TEIHSVCWDTNGEY 690 (786)
Q Consensus 617 g~I~iwDl~~~~~~~~~~~~-i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h--~---~~I~sv~~spdg~~ 690 (786)
+.+.++|..+.+.+..+... .....++++++.++++..++.|.++|..+.+.+..+... . ..++.+.|. ++.+
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred CEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE
Confidence 99999999999888777533 334556778888888877899999999999888877632 1 246788887 6755
Q ss_pred EEEEeCC-eEEEEECCCCeeEEEEccC-------------CCceEEEEEeCCCCEEEEEEC-CCeEEEEECCCC
Q 044075 691 LASVSQD-SVRVWSLASGECIHELSSS-------------GNKFHSCIFHPSYPTLMVIGG-YQSLELWNMAEN 749 (786)
Q Consensus 691 Lasgs~D-~I~vwDl~s~~~i~~l~~~-------------~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl~~~ 749 (786)
++....+ .|.+.|..+++.+..+... ......++|+|+++.+++++. .+.|++.++...
T Consensus 165 yvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 165 WANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 5544444 9999999999999888642 135689999999987777764 568888877543
No 240
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.92 E-value=3.4e-06 Score=101.78 Aligned_cols=266 Identities=7% Similarity=0.069 Sum_probs=180.9
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC-------CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD-------DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~-------~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
...|.++...++|.+.+ |+.+ -|.+||..+........ .....|.++...++|. |..|+.++-|.+|+..
T Consensus 262 ~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~ 338 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPI 338 (795)
T ss_dssp CSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGG
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCC
Confidence 45799999999887554 4455 58899988766544321 1235799999998886 6667877889999876
Q ss_pred CCcceeeeec-----CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee-----------cCCeEEEEEeCC
Q 044075 582 KPNFCLQTYT-----GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS-----------KGGTVQVRFQPR 645 (786)
Q Consensus 582 s~~~~~~~~~-----~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~-----------~~~i~~i~~sp~ 645 (786)
+......... -....|.++...+++. +. .|..++-|..||..+....... ...+.+++..++
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 416 (795)
T 4a2l_A 339 RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK 416 (795)
T ss_dssp GGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT
T ss_pred cccceEEcCCCCCCCCCCCeeEEEEECCCCC-EE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC
Confidence 5442111110 1235689999887766 33 4666778999998876544322 245677888888
Q ss_pred CCEEEEEECCCeEEEEEcCCCcEEEEEe----cCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEcc------
Q 044075 646 LGLLLAAASENVVSIFDVETDRLTHSFK----GHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSS------ 715 (786)
Q Consensus 646 g~~Ll~gs~dg~I~iwD~~t~~~i~~l~----~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~------ 715 (786)
+..|.+|+.++-|.+||..+++...... .....|.++..+++|.+.+... +.|.+||..+++.......
T Consensus 417 g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~ 495 (795)
T 4a2l_A 417 KSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPV 495 (795)
T ss_dssp TTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBC
T ss_pred CCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEcccccccccc
Confidence 7757788888889999998876543321 1346799999998888766554 6799999888755432211
Q ss_pred CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEc-------ccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 716 SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIA-------AHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 716 ~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~-------~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
....|.++...+++... +++. +.|.+||..+++. .+. .....|.++...++|.+.++. .+| |..|
T Consensus 496 ~~~~i~~i~~d~~g~lW-igt~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~G-l~~~ 567 (795)
T 4a2l_A 496 VSKQITTLFRDSHKRLW-IGGE-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGT-REG-FYCF 567 (795)
T ss_dssp CCCCEEEEEECTTCCEE-EEES-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SSC-EEEE
T ss_pred CCceEEEEEECCCCCEE-EEeC-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEe-CCC-ceeE
Confidence 23578999999888744 4555 6699999887776 332 234579999999988866544 344 4443
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.92 E-value=1.6e-07 Score=107.54 Aligned_cols=251 Identities=12% Similarity=0.088 Sum_probs=170.5
Q ss_pred EEEEECCCeEEEEEcCCCeeeeecC---------------------C------------C------CCCeEEEEEcc---
Q 044075 524 LASAGHDKKVVVWNMENFQTECTPD---------------------D------------H------NHIITDVRFRP--- 561 (786)
Q Consensus 524 Lasgs~Dg~V~IWdl~t~~~~~~l~---------------------~------------h------~~~V~sl~fsp--- 561 (786)
|.+|+..|.|+|+-+.+.+.+..+. . + .+....+..|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 5678888889988887666555431 0 0 11122344444
Q ss_pred --CCCEEEEEeC-CCcEEEEcCCCCcceeeeec-CCCCCeEEEEE-e-cCCCeEEEEE-----------------cCCCc
Q 044075 562 --NSTQLATSSF-DKTVRIWDAAKPNFCLQTYT-GHNNHVMSLDF-H-PKKNDLFCSC-----------------DGNSE 618 (786)
Q Consensus 562 --dg~~Lasgs~-Dg~I~VWdl~s~~~~~~~~~-~h~~~V~sl~~-s-p~g~~ll~sg-----------------s~Dg~ 618 (786)
||++|+++.. +..|.+.|+.+.+ +...+. .....+..+++ . |+++++++++ ..++.
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~-~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMK-CDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTE-EEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCce-EeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 7888877766 4569999999876 344222 22345788888 4 8999998775 33568
Q ss_pred EEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEECCC--------------------------------------eE
Q 044075 619 IRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAASEN--------------------------------------VV 658 (786)
Q Consensus 619 I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs~dg--------------------------------------~I 658 (786)
+.++|..+.+...... +....++++|+++++++++.+. .|
T Consensus 177 vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 9999999988776544 4455688999999999998653 36
Q ss_pred EEEEcCC--CcE-EEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCe------------eEEEEccCCCceE
Q 044075 659 SIFDVET--DRL-THSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGE------------CIHELSSSGNKFH 721 (786)
Q Consensus 659 ~iwD~~t--~~~-i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~------------~i~~l~~~~~~I~ 721 (786)
.|.|.++ ++. +..+.. .....++.++|||+++++++.. +|.++|+.+.+ .+..+ .......
T Consensus 257 ~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~ 334 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPL 334 (595)
T ss_dssp EEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEE
T ss_pred EEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcc
Confidence 7777776 434 444442 2345689999999999988865 89999999653 33333 3345678
Q ss_pred EEEEeCCCCEEEE-EECCCeEEEEECCC----------CeEE-EEcccCCCe-----EEEEEcCCCCEEEEEeC
Q 044075 722 SCIFHPSYPTLMV-IGGYQSLELWNMAE----------NKCM-TIAAHDCVI-----SALAQSPVTGMVASASH 778 (786)
Q Consensus 722 sv~fspdg~~L~s-gs~dg~I~IwDl~~----------~~~~-~~~~h~~~V-----~slafspdg~~LaSgs~ 778 (786)
.++|+++| ++++ ...|+.|.+||+.. .+.+ ++..|-.+- .++.++|||++|+++..
T Consensus 335 h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 335 HTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred eEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 89999999 5544 45678999999876 3344 333333221 22345799999998764
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.87 E-value=1.1e-06 Score=93.83 Aligned_cols=237 Identities=10% Similarity=0.033 Sum_probs=149.4
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC-C------------------CCCCeEEEEEccCCCEEEEEe
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD-D------------------HNHIITDVRFRPNSTQLATSS 570 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~-~------------------h~~~V~sl~fspdg~~Lasgs 570 (786)
....+++|++++++++++..++.|..|+..+.+...... . ....+..+++.+++..|+++.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 346778899999978888889999999987654332110 0 013578999997333566665
Q ss_pred CCCcEEEEcCCCCcceee--eecC-CCCCeEEEEEec-CCCeEEEEEcC-----------------CCcEEEEeCCCCee
Q 044075 571 FDKTVRIWDAAKPNFCLQ--TYTG-HNNHVMSLDFHP-KKNDLFCSCDG-----------------NSEIRFWNLSQYSC 629 (786)
Q Consensus 571 ~Dg~I~VWdl~s~~~~~~--~~~~-h~~~V~sl~~sp-~g~~ll~sgs~-----------------Dg~I~iwDl~~~~~ 629 (786)
..+.|.++|..++..... ...+ .......+++.+ ++..++ +... ++.|..||..+++.
T Consensus 99 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v-~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYF-TDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEE-EESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEE-ECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 556688888775431111 1111 123478899999 776444 4322 36789999877654
Q ss_pred eEeec--CCeEEEEEeCCCCEEEEEEC-CCeEEEEEcCCCc--EEEEEecCCCCEEEEEEcCCCCEEEEEeC--------
Q 044075 630 ARISK--GGTVQVRFQPRLGLLLAAAS-ENVVSIFDVETDR--LTHSFKGHSTEIHSVCWDTNGEYLASVSQ-------- 696 (786)
Q Consensus 630 ~~~~~--~~i~~i~~sp~g~~Ll~gs~-dg~I~iwD~~t~~--~i~~l~~h~~~I~sv~~spdg~~Lasgs~-------- 696 (786)
..... .....++++++++.|+++.. .+.|.+|++.... ....+..... ...++++++|+++++...
T Consensus 178 ~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 178 TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccC
Confidence 43322 34567899999997777754 5899999987521 1111211223 788999999998877655
Q ss_pred --C-eEEEEECCCCeeEEEEccCC----CceEEEEEeCCCCEEEEEECCCeEEEEECCCCe
Q 044075 697 --D-SVRVWSLASGECIHELSSSG----NKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK 750 (786)
Q Consensus 697 --D-~I~vwDl~s~~~i~~l~~~~----~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~ 750 (786)
. .|.++|.. ++.+..+.... ..+..+++. ++..+++....+.|.++++....
T Consensus 257 ~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 257 RVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH-DGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp CEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE-TTEEEEECSSCSEEEEEEC----
T ss_pred CCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe-CCEEEEeecCCCceEEEeccccc
Confidence 3 68888864 77776665542 346666663 44444444456788888876443
No 243
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.86 E-value=6.6e-06 Score=99.28 Aligned_cols=261 Identities=11% Similarity=0.073 Sum_probs=177.3
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCC--------CCCCeEEEEEccCCCEEEEEeCCCcEEEEcC
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDD--------HNHIITDVRFRPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~--------h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl 580 (786)
...|.++...++|. |..|+.++-|..|+..+......... ....|.+++..+++..|.+|+.++-|.+||.
T Consensus 356 ~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 45699999998887 55577777799999887654433211 2467999999888886777888778999998
Q ss_pred CCCcceeeeec-----CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---------CCeEEEEEeCCC
Q 044075 581 AKPNFCLQTYT-----GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---------GGTVQVRFQPRL 646 (786)
Q Consensus 581 ~s~~~~~~~~~-----~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---------~~i~~i~~sp~g 646 (786)
.++. ...+. .....|.++...+++...+ +. . +.|.+||..+++...... ..+.++...+++
T Consensus 435 ~~~~--~~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g 509 (795)
T 4a2l_A 435 NSGQ--VENFNQRNSQLVNENVYAILPDGEGNLWL-GT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHK 509 (795)
T ss_dssp TTCC--EEEECTTTSCCSCSCEEEEEECSSSCEEE-EE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTC
T ss_pred CCCc--EEEeecCCCCcCCCeeEEEEECCCCCEEE-Ee-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCC
Confidence 8765 22222 1345789999887776444 33 3 458899988766544321 356778788777
Q ss_pred CEEEEEECCCeEEEEEcCCCcEEEEEe-------cCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEcc----
Q 044075 647 GLLLAAASENVVSIFDVETDRLTHSFK-------GHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSS---- 715 (786)
Q Consensus 647 ~~Ll~gs~dg~I~iwD~~t~~~i~~l~-------~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~---- 715 (786)
...+ ++. +-|.+||..+++. .+. .....|.+|..+++|.+.++.. +.|..||..+++.. .+..
T Consensus 510 ~lWi-gt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~~~d~~~~~~~-~~~~~~gl 583 (795)
T 4a2l_A 510 RLWI-GGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-EGFYCFNEKDKQIK-RYNTTNGL 583 (795)
T ss_dssp CEEE-EES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-SCEEEEETTTTEEE-EECGGGTC
T ss_pred CEEE-EeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-CCceeECCCCCcEE-EeCCCCCC
Confidence 6554 455 5688899887765 332 1345789999999998766554 47899998877544 3321
Q ss_pred CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCC----Ce--EEEEEcCCCCEEEEEeCCCcEEE
Q 044075 716 SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDC----VI--SALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 716 ~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~----~V--~slafspdg~~LaSgs~DG~I~I 784 (786)
....|.++...++|...++ + ++.|..||..+++...+..+.+ .+ .++...++|.++ .|+.+|.+++
T Consensus 584 ~~~~i~~i~~d~~g~lWi~-t-~~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~-~g~~~Gl~~~ 655 (795)
T 4a2l_A 584 PNNVVYGILEDSFGRLWLS-T-NRGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMY-FGGINGITTF 655 (795)
T ss_dssp SCSCEEEEEECTTSCEEEE-E-TTEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEE-EEETTEEEEE
T ss_pred chhheEEEEECCCCCEEEE-c-CCceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEE-EecCCceEEE
Confidence 2356888888888875544 4 4568889999888766554332 22 466777777655 4667776654
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.86 E-value=2.6e-06 Score=88.29 Aligned_cols=216 Identities=9% Similarity=0.010 Sum_probs=145.4
Q ss_pred CeEEEEEcCCCCEEEEEE-CCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEE-eCCCcEEEEcCCCCcceee
Q 044075 511 KVTCCHFSSDGKLLASAG-HDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATS-SFDKTVRIWDAAKPNFCLQ 588 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs-~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasg-s~Dg~I~VWdl~s~~~~~~ 588 (786)
.+.+++|++++..|+.+. .++.|.+++++.......+.........+++++++..|+.+ ...+.|.+++++.... ..
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~ 115 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RV 115 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EE
Confidence 478999999766665554 56899999998665444443333567899999976655555 4567899999875432 22
Q ss_pred eecCCCCCeEEEEEecCCCeEEEEEcC--CCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEEC-CCeEEEEE
Q 044075 589 TYTGHNNHVMSLDFHPKKNDLFCSCDG--NSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAAS-ENVVSIFD 662 (786)
Q Consensus 589 ~~~~h~~~V~sl~~sp~g~~ll~sgs~--Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~-dg~I~iwD 662 (786)
...........++++|++..++++... .+.|..+++.......... .....++++++++.|+++.. .+.|.++|
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 222222467899999987877766654 4788888887543222221 35678999999888877766 57899999
Q ss_pred cCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEe-CC-eEEEEECCCCeeEEEEccCC-CceEEEEEeCCCC
Q 044075 663 VETDRLTHSFKGHSTEIHSVCWDTNGEYLASVS-QD-SVRVWSLASGECIHELSSSG-NKFHSCIFHPSYP 730 (786)
Q Consensus 663 ~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs-~D-~I~vwDl~s~~~i~~l~~~~-~~I~sv~fspdg~ 730 (786)
.........+.. ......++.. +..|+.+. .+ .|.++|..+++.+.++.... .....+++.|++.
T Consensus 196 ~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 196 PAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred cCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 986544333332 3345677764 44555554 33 89999999999888886543 2466777777653
No 245
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.82 E-value=3.8e-07 Score=94.31 Aligned_cols=192 Identities=15% Similarity=0.149 Sum_probs=138.4
Q ss_pred eeeeecCCCC--CCeEEEEEccCCCEEEEEeCCC--cEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC
Q 044075 542 QTECTPDDHN--HIITDVRFRPNSTQLATSSFDK--TVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS 617 (786)
Q Consensus 542 ~~~~~l~~h~--~~V~sl~fspdg~~Lasgs~Dg--~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg 617 (786)
+.+.++ .|. .....+.|+ ++.++++.+.+| .|+++|+.+++. +....- ..........+.++.++++.-.++
T Consensus 32 ~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv-~~~~~l-~~~~FgeGit~~g~~ly~ltw~~~ 107 (262)
T 3nol_A 32 QIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKT-LQQIEL-GKRYFGEGISDWKDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCE-EEEEEC-CTTCCEEEEEEETTEEEEEESSSS
T ss_pred EEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcE-EEEEec-CCccceeEEEEeCCEEEEEEeeCC
Confidence 344555 333 345789998 666666777665 899999999884 333332 233433333344678887877899
Q ss_pred cEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecC--C---CCEEEEEEcCCCCEEE
Q 044075 618 EIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGH--S---TEIHSVCWDTNGEYLA 692 (786)
Q Consensus 618 ~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h--~---~~I~sv~~spdg~~La 692 (786)
.+.+||..+.+.+..+........+.+++..|+++..++.|.++|..+.+.+..+... . ..++.+.|. +|++++
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lya 186 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFA 186 (262)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEEEEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEE
Confidence 9999999999988877754444455577888888777889999999999888877642 2 345667876 676555
Q ss_pred EEeCC-eEEEEECCCCeeEEEEccC------------CCceEEEEEeCCCCEEEEEECC
Q 044075 693 SVSQD-SVRVWSLASGECIHELSSS------------GNKFHSCIFHPSYPTLMVIGGY 738 (786)
Q Consensus 693 sgs~D-~I~vwDl~s~~~i~~l~~~------------~~~I~sv~fspdg~~L~sgs~d 738 (786)
..-.+ .|.+.|.++++.+..+... ......++|+|+++.|++.+..
T Consensus 187 n~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 187 NVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 55444 9999999999999888653 2356889999999999888875
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.81 E-value=1.2e-07 Score=108.73 Aligned_cols=229 Identities=14% Similarity=0.166 Sum_probs=161.7
Q ss_pred CCCEEEEEEC-CCeEEEEEcCCCeeeeecCCC-CCCeEEEEE-c-cCCCEEEEEe------------------CCCcEEE
Q 044075 520 DGKLLASAGH-DKKVVVWNMENFQTECTPDDH-NHIITDVRF-R-PNSTQLATSS------------------FDKTVRI 577 (786)
Q Consensus 520 dg~~Lasgs~-Dg~V~IWdl~t~~~~~~l~~h-~~~V~sl~f-s-pdg~~Lasgs------------------~Dg~I~V 577 (786)
||++|+++.. ++.|.+.|+.+.++...+.-. ...+..+++ . |+++++++++ .++.|.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 8888887765 457999999999988855322 245888898 4 8999999885 3467999
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC-------------------------------------CcEE
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN-------------------------------------SEIR 620 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D-------------------------------------g~I~ 620 (786)
+|.++.+.......+- ....++++|+++.+++++... +.|.
T Consensus 180 ID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 9999876433333322 356678999999998877543 2466
Q ss_pred EEeCCC--Cee-eEeec--CCeEEEEEeCCCCEEEEEEC-CCeEEEEEcCCCc------------EEEEEecCCCCEEEE
Q 044075 621 FWNLSQ--YSC-ARISK--GGTVQVRFQPRLGLLLAAAS-ENVVSIFDVETDR------------LTHSFKGHSTEIHSV 682 (786)
Q Consensus 621 iwDl~~--~~~-~~~~~--~~i~~i~~sp~g~~Ll~gs~-dg~I~iwD~~t~~------------~i~~l~~h~~~I~sv 682 (786)
+.|..+ ++. +.... ....++.++|||+++++++. +..|.++|+.+.+ .+..+. -......+
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~ 336 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHT 336 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEE
T ss_pred EEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceE
Confidence 777776 333 22222 45667899999999888876 6899999999653 344443 45568899
Q ss_pred EEcCCCCEEEE-EeCC-eEEEEECCC----------CeeEEEEccCCCceE-----EEEEeCCCCEEEEEECC--CeE--
Q 044075 683 CWDTNGEYLAS-VSQD-SVRVWSLAS----------GECIHELSSSGNKFH-----SCIFHPSYPTLMVIGGY--QSL-- 741 (786)
Q Consensus 683 ~~spdg~~Las-gs~D-~I~vwDl~s----------~~~i~~l~~~~~~I~-----sv~fspdg~~L~sgs~d--g~I-- 741 (786)
+|+++| ++++ ..-+ .|.+||+.+ ...+.++..+-.+-. .+.++|||++|++...- ..+
T Consensus 337 aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~ 415 (595)
T 1fwx_A 337 AFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLN 415 (595)
T ss_dssp EECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCC
T ss_pred EECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccccc
Confidence 999999 5544 4455 899999987 567777776644322 12457999999998753 234
Q ss_pred ---------EEEECCCCeEE
Q 044075 742 ---------ELWNMAENKCM 752 (786)
Q Consensus 742 ---------~IwDl~~~~~~ 752 (786)
.++|+.+++..
T Consensus 416 ~gp~~~~~~ql~dis~~~m~ 435 (595)
T 1fwx_A 416 VGPLKPENDQLIDISGDKMV 435 (595)
T ss_dssp CCSSCCEEEEEEECSSSSCE
T ss_pred CCCCCCCcceEEEcCCCcEE
Confidence 78999766543
No 247
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.80 E-value=8.3e-07 Score=103.22 Aligned_cols=261 Identities=11% Similarity=0.117 Sum_probs=166.1
Q ss_pred CCEEEEEEC-CCeEEEEEc-CCCeeeeecCCCCC-C----------eEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 521 GKLLASAGH-DKKVVVWNM-ENFQTECTPDDHNH-I----------ITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 521 g~~Lasgs~-Dg~V~IWdl-~t~~~~~~l~~h~~-~----------V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
+..|++++. ++.|..+|. .+++.+-.+..... . ...++. .+..|++++.|+.|..+|..+++.+-
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 456666777 889999999 89988876643221 0 011223 35678888899999999999987432
Q ss_pred eeec-CCC--CCeEE-EEEecCCCeEEEEEcC-----CCcEEEEeCCCCeeeEeecCC--e-------------------
Q 044075 588 QTYT-GHN--NHVMS-LDFHPKKNDLFCSCDG-----NSEIRFWNLSQYSCARISKGG--T------------------- 637 (786)
Q Consensus 588 ~~~~-~h~--~~V~s-l~~sp~g~~ll~sgs~-----Dg~I~iwDl~~~~~~~~~~~~--i------------------- 637 (786)
..-. .+. ..+.+ .... +..+++.+.. ++.|+.+|..+++.+-.+... .
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVA--KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEE--TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEEE--CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 2211 110 01211 1112 3445544432 789999999998876543311 1
Q ss_pred --------------------EEEEEeCCCCEEEEEECC----------------CeEEEEEcCCCcEEEEEec--CC---
Q 044075 638 --------------------VQVRFQPRLGLLLAAASE----------------NVVSIFDVETDRLTHSFKG--HS--- 676 (786)
Q Consensus 638 --------------------~~i~~sp~g~~Ll~gs~d----------------g~I~iwD~~t~~~i~~l~~--h~--- 676 (786)
..+++.+....+++++.+ +.|..+|.++++.+..+.. |.
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 125667777788777642 3599999999999888763 21
Q ss_pred -----CCEEEEEEcCCCC---EEEEEeCC-eEEEEECCCCeeEEEEccCC-------------Cce--------------
Q 044075 677 -----TEIHSVCWDTNGE---YLASVSQD-SVRVWSLASGECIHELSSSG-------------NKF-------------- 720 (786)
Q Consensus 677 -----~~I~sv~~spdg~---~Lasgs~D-~I~vwDl~s~~~i~~l~~~~-------------~~I-------------- 720 (786)
.++. +....+|+ +++.++.+ .+.++|..+++.+..+.... .++
T Consensus 298 ~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 376 (571)
T 2ad6_A 298 FAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT 376 (571)
T ss_dssp CCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred cccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence 1221 22234674 56677777 99999999999887764322 111
Q ss_pred ------------EEEEEeCCCCEEEEEE-------------------------------------CCCeEEEEECCCCeE
Q 044075 721 ------------HSCIFHPSYPTLMVIG-------------------------------------GYQSLELWNMAENKC 751 (786)
Q Consensus 721 ------------~sv~fspdg~~L~sgs-------------------------------------~dg~I~IwDl~~~~~ 751 (786)
..++++|+...|++.. .++.|..||+.+++.
T Consensus 377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~ 456 (571)
T 2ad6_A 377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA 456 (571)
T ss_dssp EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence 2357888877777654 247899999999987
Q ss_pred EEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 752 MTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 752 ~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+-...+...+.+..+...+.+++.++.||.|++||
T Consensus 457 ~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D 491 (571)
T 2ad6_A 457 KWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALD 491 (571)
T ss_dssp EEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred EEEecCCCCccceeEEECCCEEEEEcCCCeEEEEE
Confidence 74444433343333333466788899999999886
No 248
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.78 E-value=1.1e-05 Score=97.28 Aligned_cols=270 Identities=13% Similarity=0.047 Sum_probs=176.3
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC--------------CCCCCeEEEEEccCCCEEEEEeCCCc
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD--------------DHNHIITDVRFRPNSTQLATSSFDKT 574 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~--------------~h~~~V~sl~fspdg~~Lasgs~Dg~ 574 (786)
...|.++...++|. |..|+..+-|.++|..+........ .....|.++...+++. |.+|+.++-
T Consensus 257 ~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~G 334 (781)
T 3v9f_A 257 SSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGG 334 (781)
T ss_dssp CCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSC
T ss_pred CceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCe
Confidence 46799999988876 5556664568889987654322111 2345799999988876 667777778
Q ss_pred EEEEcCCCCcceeeee--------cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe------ecCCeEEE
Q 044075 575 VRIWDAAKPNFCLQTY--------TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI------SKGGTVQV 640 (786)
Q Consensus 575 I~VWdl~s~~~~~~~~--------~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~------~~~~i~~i 640 (786)
|..|+........... .-....|.++...+++. +. .|..++-|.+||..+...... ....+.++
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i 412 (781)
T 3v9f_A 335 INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCS 412 (781)
T ss_dssp EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEE
T ss_pred EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEE
Confidence 9999987654211111 01235689998887765 33 455466788999876543322 12456677
Q ss_pred EEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEe--cCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccC--
Q 044075 641 RFQPRLGLLLAAASENVVSIFDVETDRLTHSFK--GHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSS-- 716 (786)
Q Consensus 641 ~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~--~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~-- 716 (786)
...+++. |.+|+.++-|..+|..+++...... .....|.++..++++.+.+. +.+.|.+||..+++........
T Consensus 413 ~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~~Gl~~~~~~~~~~~~~~~~~~~ 490 (781)
T 3v9f_A 413 LKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG-THAGVFVIDLASKKVIHHYDTSNS 490 (781)
T ss_dssp EECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-ETTEEEEEESSSSSCCEEECTTTS
T ss_pred EECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-ECCceEEEeCCCCeEEecccCccc
Confidence 7766655 5567777789999988775433221 13467999998888876554 4478999998876544333222
Q ss_pred ---CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcc----cCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 717 ---GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAA----HDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 717 ---~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~----h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
...|.++...+++. |.+++.++.|..||..+++...+.. ....|.++...++|.+.++. .+|.|..||
T Consensus 491 ~~~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d 565 (781)
T 3v9f_A 491 QLLENFVRSIAQDSEGR-FWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPS 565 (781)
T ss_dssp SCSCSCEEEEEECTTCC-EEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESC
T ss_pred ccccceeEEEEEcCCCC-EEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEEC
Confidence 36789999988887 5556665568889988877665432 23568999998888765544 466646654
No 249
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.77 E-value=2.2e-06 Score=89.43 Aligned_cols=202 Identities=9% Similarity=0.076 Sum_probs=138.9
Q ss_pred ceeeeeEEeecCCC--CeEEEEEcCCCCEEEEEEC--CCeEEEEEcCCCeeeeecCCCC-CCeEEEEEccCCCEEEEE-e
Q 044075 497 FSFNEVSSIRKSSS--KVTCCHFSSDGKLLASAGH--DKKVVVWNMENFQTECTPDDHN-HIITDVRFRPNSTQLATS-S 570 (786)
Q Consensus 497 ~~~~~v~~l~~H~~--~V~~lafSpdg~~Lasgs~--Dg~V~IWdl~t~~~~~~l~~h~-~~V~sl~fspdg~~Lasg-s 570 (786)
+.++.+.++. |.. ....++|++|+.++++.+. ++.|.++|+.+++.+..+.-.. .....+++. +..|+.+ -
T Consensus 7 ~~~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~ 83 (266)
T 2iwa_A 7 YIVEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVW 83 (266)
T ss_dssp EEEEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEET
T ss_pred cCceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEe
Confidence 4566666774 553 3679999998755554443 5799999999999988864222 223355555 4455554 4
Q ss_pred CCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecC--------CeEEEEE
Q 044075 571 FDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKG--------GTVQVRF 642 (786)
Q Consensus 571 ~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~--------~i~~i~~ 642 (786)
.++.|.++|..+.+. +..+...... ...+++++..++++. .++.|.++|..+.+......- ....+.|
T Consensus 84 ~~~~v~viD~~t~~v-~~~i~~g~~~--g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~ 159 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSN-IKNFTHQMKD--GWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEY 159 (266)
T ss_dssp TCSEEEEEETTTTEE-EEEEECCSSS--CCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred cCCEEEEEECCCCcE-EEEEECCCCC--eEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEE
Confidence 578999999998764 4444322111 233556788888665 688999999999877665441 2456777
Q ss_pred eCCCCEEEEEE-CCCeEEEEEcCCCcEEEEEecC-------------CCCEEEEEEcCCCCEEEEEeCC--eEEEEECCC
Q 044075 643 QPRLGLLLAAA-SENVVSIFDVETDRLTHSFKGH-------------STEIHSVCWDTNGEYLASVSQD--SVRVWSLAS 706 (786)
Q Consensus 643 sp~g~~Ll~gs-~dg~I~iwD~~t~~~i~~l~~h-------------~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s 706 (786)
. ++ .+++.. .++.|.+.|..+++.+..+... ....+.|+|+|+++.|++++.. .|.+.++..
T Consensus 160 ~-dg-~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 160 I-NG-EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp E-TT-EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred E-CC-EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 7 55 555555 4789999999999998888631 1356899999999877776654 788877654
Q ss_pred C
Q 044075 707 G 707 (786)
Q Consensus 707 ~ 707 (786)
.
T Consensus 238 ~ 238 (266)
T 2iwa_A 238 V 238 (266)
T ss_dssp C
T ss_pred c
Confidence 3
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.73 E-value=3.2e-06 Score=90.25 Aligned_cols=229 Identities=10% Similarity=0.034 Sum_probs=142.7
Q ss_pred CeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecC------------------CCCCeEEEEEecCCCeEEEEEc
Q 044075 553 IITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTG------------------HNNHVMSLDFHPKKNDLFCSCD 614 (786)
Q Consensus 553 ~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~------------------h~~~V~sl~~sp~g~~ll~sgs 614 (786)
...+++|.+++++++++..++.|..||..+.......... ....+..+++.+++..++++ +
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~-d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV-D 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE-E
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE-E
Confidence 3567889999987888888999999998765421111100 01357889999744455544 3
Q ss_pred CCCcEEEEeCCCCeeeEee---c----CCeEEEEEeC-CCCEEEEEEC-----------------CCeEEEEEcCCCcEE
Q 044075 615 GNSEIRFWNLSQYSCARIS---K----GGTVQVRFQP-RLGLLLAAAS-----------------ENVVSIFDVETDRLT 669 (786)
Q Consensus 615 ~Dg~I~iwDl~~~~~~~~~---~----~~i~~i~~sp-~g~~Ll~gs~-----------------dg~I~iwD~~t~~~i 669 (786)
..+.|..+|..++...... . .....+++.+ ++..+++... ++.|..||..+++..
T Consensus 99 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 3455888888765432221 1 2356789999 8876555432 367999998777543
Q ss_pred EEEecCCCCEEEEEEcCCCCEEEEEe-CC-eEEEEECCCCe--eEEEEccCCCceEEEEEeCCCCEEEEEEC--------
Q 044075 670 HSFKGHSTEIHSVCWDTNGEYLASVS-QD-SVRVWSLASGE--CIHELSSSGNKFHSCIFHPSYPTLMVIGG-------- 737 (786)
Q Consensus 670 ~~l~~h~~~I~sv~~spdg~~Lasgs-~D-~I~vwDl~s~~--~i~~l~~~~~~I~sv~fspdg~~L~sgs~-------- 737 (786)
..... ......|+|++++++|+++. .+ .|.+|++.... ....+....+ ...++++++|.++++...
T Consensus 179 ~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 179 LLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp EEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred EeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccC
Confidence 32221 23356799999998766654 33 89999987521 1112211223 788999999986666544
Q ss_pred --CCeEEEEECCCCeEE-EEccc----CCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 738 --YQSLELWNMAENKCM-TIAAH----DCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 738 --dg~I~IwDl~~~~~~-~~~~h----~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.+.|..+|.. ++.+ .+... ...++++++. ++.++++...++.|.+++
T Consensus 257 ~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 257 RVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH-DGLLYIGTLFHGSVGILV 310 (322)
T ss_dssp CEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE-TTEEEEECSSCSEEEEEE
T ss_pred CCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe-CCEEEEeecCCCceEEEe
Confidence 4678888875 4444 33322 2357777773 555555555667777663
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.73 E-value=2.4e-06 Score=99.60 Aligned_cols=263 Identities=7% Similarity=0.051 Sum_probs=165.2
Q ss_pred CCEEEEEEC-CCeEEEEEc-CCCeeeeecCCCCCC-----------eEEEEEccCCCE----EEEEeCCCcEEEEcCCCC
Q 044075 521 GKLLASAGH-DKKVVVWNM-ENFQTECTPDDHNHI-----------ITDVRFRPNSTQ----LATSSFDKTVRIWDAAKP 583 (786)
Q Consensus 521 g~~Lasgs~-Dg~V~IWdl-~t~~~~~~l~~h~~~-----------V~sl~fspdg~~----Lasgs~Dg~I~VWdl~s~ 583 (786)
+..|++++. ++.|.-+|. .+++.+-.+...... ...+++.|.+.. |++++.|+.|..+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 456777777 889999999 899888776433211 123455443334 888889999999999998
Q ss_pred cceeeeecC-CC--CCeEE-EEEecCCCeEEEEEc-----CCCcEEEEeCCCCeeeEeecCC--e---------------
Q 044075 584 NFCLQTYTG-HN--NHVMS-LDFHPKKNDLFCSCD-----GNSEIRFWNLSQYSCARISKGG--T--------------- 637 (786)
Q Consensus 584 ~~~~~~~~~-h~--~~V~s-l~~sp~g~~ll~sgs-----~Dg~I~iwDl~~~~~~~~~~~~--i--------------- 637 (786)
+.+-..-.. +. ..+.+ ..+. +..+++.++ .++.|+.+|.++++.+-.+... .
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 853322111 10 01211 1122 344543332 3799999999998876543311 1
Q ss_pred ------------------------EEEEEeCCCCEEEEEECC----------------CeEEEEEcCCCcEEEEEecCCC
Q 044075 638 ------------------------VQVRFQPRLGLLLAAASE----------------NVVSIFDVETDRLTHSFKGHST 677 (786)
Q Consensus 638 ------------------------~~i~~sp~g~~Ll~gs~d----------------g~I~iwD~~t~~~i~~l~~h~~ 677 (786)
..+++.+....+++++.+ +.|..+|.++++.+..+.....
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 134567778888888765 3899999999999888774221
Q ss_pred ----------CEEEEEEc-CCC---CEEEEEeCC-eEEEEECCCCeeEEEEccCC-------------Cce---------
Q 044075 678 ----------EIHSVCWD-TNG---EYLASVSQD-SVRVWSLASGECIHELSSSG-------------NKF--------- 720 (786)
Q Consensus 678 ----------~I~sv~~s-pdg---~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~-------------~~I--------- 720 (786)
++. +... .+| ..++.++.+ .+.++|.++++.+....... .++
T Consensus 300 d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 378 (599)
T 1w6s_A 300 DEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRM 378 (599)
T ss_dssp CSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCT
T ss_pred ccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCC
Confidence 121 2222 567 467777777 99999999999887664221 111
Q ss_pred -----------------EEEEEeCCCCEEEEEE---------------------------------------CCCeEEEE
Q 044075 721 -----------------HSCIFHPSYPTLMVIG---------------------------------------GYQSLELW 744 (786)
Q Consensus 721 -----------------~sv~fspdg~~L~sgs---------------------------------------~dg~I~Iw 744 (786)
..++++|+...+++.. .+|.|..|
T Consensus 379 ~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~ 458 (599)
T 1w6s_A 379 DHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAY 458 (599)
T ss_dssp TCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEE
T ss_pred CCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEE
Confidence 2356777666555431 34689999
Q ss_pred ECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 745 NMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 745 Dl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|+.+++.+-...+..++..-.....+.+|+.++.||.|+.||
T Consensus 459 D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D 500 (599)
T 1w6s_A 459 NAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARD 500 (599)
T ss_dssp CTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred ECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEE
Confidence 999998774433333332211223466788899999999875
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.73 E-value=1.4e-06 Score=90.14 Aligned_cols=182 Identities=10% Similarity=0.107 Sum_probs=134.0
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE
Q 044075 552 HIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR 631 (786)
Q Consensus 552 ~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~ 631 (786)
.....+.|+ ++.++++.+.+|.|+++|+.+++..... .. ......-..+.++.++++.-.++.+.+||..+.+.+.
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~--~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL--GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC--TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC--CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEE
Confidence 345788887 4566677778889999999998854444 22 2333333334567788788889999999999999888
Q ss_pred eecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEec--CC---CCEEEEEEcCCCCEEEEEeCC-eEEEEECC
Q 044075 632 ISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKG--HS---TEIHSVCWDTNGEYLASVSQD-SVRVWSLA 705 (786)
Q Consensus 632 ~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~--h~---~~I~sv~~spdg~~Lasgs~D-~I~vwDl~ 705 (786)
.+........+.+++..|+++..++.|.++|..+.+.+..+.. +. ..++.+.|. +|++++....+ .|.+.|.+
T Consensus 131 ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 131 TTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp EEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTT
T ss_pred EEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCC
Confidence 7774433344456788888888889999999999998887764 22 245677876 77655555444 99999999
Q ss_pred CCeeEEEEccC-------------CCceEEEEEeCCCCEEEEEECC
Q 044075 706 SGECIHELSSS-------------GNKFHSCIFHPSYPTLMVIGGY 738 (786)
Q Consensus 706 s~~~i~~l~~~-------------~~~I~sv~fspdg~~L~sgs~d 738 (786)
+++.+..+... ......++++|+++.|++.+..
T Consensus 210 TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 210 TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 99998887642 2356889999998888887764
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.70 E-value=1.9e-05 Score=83.65 Aligned_cols=232 Identities=11% Similarity=0.052 Sum_probs=144.4
Q ss_pred eeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCC--cEEE
Q 044075 500 NEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDK--TVRI 577 (786)
Q Consensus 500 ~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg--~I~V 577 (786)
+.+..+... .....++|+++|+++++-..++.|..||.+.. ....+. ....+..+++.++++++++..... .|..
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 344444332 46789999999997777667899999997753 333322 234688999999998666554332 4666
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe--eeEe--------e-c--CCeEEEEEeC
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS--CARI--------S-K--GGTVQVRFQP 644 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~--~~~~--------~-~--~~i~~i~~sp 644 (786)
+|..+++.....-.........++..+ +..++++...++.|+++|..... .... . . .....+ ++
T Consensus 100 ~d~~~g~~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~ 176 (306)
T 2p4o_A 100 LVKSDGTVETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR 176 (306)
T ss_dssp EECTTSCEEEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE
T ss_pred EcCCCCeEEEEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc
Confidence 776665522111111222334555544 44555555568899999987542 2110 0 0 123344 78
Q ss_pred CCCEEEEEEC-CCeEEEEEcCC-CcE--EEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEE--EEccCC
Q 044075 645 RLGLLLAAAS-ENVVSIFDVET-DRL--THSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIH--ELSSSG 717 (786)
Q Consensus 645 ~g~~Ll~gs~-dg~I~iwD~~t-~~~--i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~--~l~~~~ 717 (786)
+++.|+++.. .+.|.+||+.. ++. ...+.. ......++++++|+++++.... .|.+||.. ++... .+....
T Consensus 177 dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~ 254 (306)
T 2p4o_A 177 FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGV 254 (306)
T ss_dssp ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTC
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeeccccc
Confidence 8887777765 57899999875 321 111111 1345678999999877766655 89999975 55432 333334
Q ss_pred CceEEEEEe---CCCCEEEEEECCC
Q 044075 718 NKFHSCIFH---PSYPTLMVIGGYQ 739 (786)
Q Consensus 718 ~~I~sv~fs---pdg~~L~sgs~dg 739 (786)
...++++|. +++..|++++..+
T Consensus 255 ~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 255 IGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CCceEEEEecccCCCCEEEEECCCC
Confidence 568999998 8888888877653
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.69 E-value=3.8e-06 Score=86.10 Aligned_cols=192 Identities=16% Similarity=0.120 Sum_probs=136.3
Q ss_pred eeeeecCCCC--CCeEEEEEccCCCEEEEEeCC--CcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC
Q 044075 542 QTECTPDDHN--HIITDVRFRPNSTQLATSSFD--KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS 617 (786)
Q Consensus 542 ~~~~~l~~h~--~~V~sl~fspdg~~Lasgs~D--g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg 617 (786)
+.+.++ .|. .....+.|+. +.++.+.+.+ ..|+++|+.+++. +....-. ..+........++.++...-.++
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv-~~~~~l~-~~~fgeGi~~~~~~ly~ltw~~~ 85 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRI-LQRAEVP-PPYFGAGIVAWRDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCE-EEEEECC-TTCCEEEEEEETTEEEEEESSSS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCE-EEEEeCC-CCcceeEEEEeCCEEEEEEeeCC
Confidence 344455 333 4567899986 5555666654 4899999999884 3333221 22333333334677888888899
Q ss_pred cEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecC--C---CCEEEEEEcCCCCEEE
Q 044075 618 EIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGH--S---TEIHSVCWDTNGEYLA 692 (786)
Q Consensus 618 ~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h--~---~~I~sv~~spdg~~La 692 (786)
.+.+||..+.+.+..+........+.+++..|+++..++.|.++|..+.+.+.++... . ..++.+.|. +|++++
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lya 164 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLA 164 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEE
Confidence 9999999999988877744444455567888888888899999999999888887642 1 345677775 676665
Q ss_pred EEeCC-eEEEEECCCCeeEEEEccC-------------CCceEEEEEeCCCCEEEEEECC
Q 044075 693 SVSQD-SVRVWSLASGECIHELSSS-------------GNKFHSCIFHPSYPTLMVIGGY 738 (786)
Q Consensus 693 sgs~D-~I~vwDl~s~~~i~~l~~~-------------~~~I~sv~fspdg~~L~sgs~d 738 (786)
....+ .|.+.|.++++.+..+... ......++++|++..|++.+..
T Consensus 165 nvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 165 NVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 55444 9999999999998887632 2356889999999888888865
No 255
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.68 E-value=4.6e-07 Score=107.14 Aligned_cols=264 Identities=9% Similarity=0.055 Sum_probs=156.8
Q ss_pred EEEEcC-CCCEEEEEECCC-----------eEEEEEcCCCeee--eec-CCCCCCeEEEEEccCCCEEEEEeC-CCcEEE
Q 044075 514 CCHFSS-DGKLLASAGHDK-----------KVVVWNMENFQTE--CTP-DDHNHIITDVRFRPNSTQLATSSF-DKTVRI 577 (786)
Q Consensus 514 ~lafSp-dg~~Lasgs~Dg-----------~V~IWdl~t~~~~--~~l-~~h~~~V~sl~fspdg~~Lasgs~-Dg~I~V 577 (786)
++++.+ ++++++.|+.+. .+.+||..+.+-. ..+ ..+.....++++..+++++++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556677 888999887543 5889998875432 222 223344456788889999999985 468999
Q ss_pred EcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEc-CC-----CcEEEEeCCCCeeeEeec-------CCeEEEEEeC
Q 044075 578 WDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCD-GN-----SEIRFWNLSQYSCARISK-------GGTVQVRFQP 644 (786)
Q Consensus 578 Wdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs-~D-----g~I~iwDl~~~~~~~~~~-------~~i~~i~~sp 644 (786)
||..+.......-......-.++++.+++..+ +.|+ .+ ..+.+||..+.+...... .......+..
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iy-v~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVF-TIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEE-EECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEE-EEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 99987653221111111122345555666644 4555 34 569999998766444311 0000011223
Q ss_pred CCCEEEEEECC---------CeEEEEEcCCCcEEEEEecCC---------CCEEEEEEcC-CCCEEEEEeC---------
Q 044075 645 RLGLLLAAASE---------NVVSIFDVETDRLTHSFKGHS---------TEIHSVCWDT-NGEYLASVSQ--------- 696 (786)
Q Consensus 645 ~g~~Ll~gs~d---------g~I~iwD~~t~~~i~~l~~h~---------~~I~sv~~sp-dg~~Lasgs~--------- 696 (786)
++..++.++.+ ..+..||..+.........+. ..-.++.|.. +++++++|+.
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 44444555443 457889988775443332221 1234555543 6777777763
Q ss_pred C---eEEEEECCCCeeEEEE--ccCCCc-eEEEEEeCCCCEEEEEECC-----------CeEEEEECCCCeEEEEcc---
Q 044075 697 D---SVRVWSLASGECIHEL--SSSGNK-FHSCIFHPSYPTLMVIGGY-----------QSLELWNMAENKCMTIAA--- 756 (786)
Q Consensus 697 D---~I~vwDl~s~~~i~~l--~~~~~~-I~sv~fspdg~~L~sgs~d-----------g~I~IwDl~~~~~~~~~~--- 756 (786)
+ .|.+||..+..-.... ..+... ..++++.|+++.+++|+.+ ..+.+||..+++...+..
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~ 508 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI 508 (656)
T ss_dssp CCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSS
T ss_pred CcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCC
Confidence 1 4778888776544332 112222 3455677899999988854 468999998887654432
Q ss_pred cCCCeEEEEEcCCCCEEEEEeC
Q 044075 757 HDCVISALAQSPVTGMVASASH 778 (786)
Q Consensus 757 h~~~V~slafspdg~~LaSgs~ 778 (786)
......+..+.+++++++.|+.
T Consensus 509 ~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 509 VRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCTTEEEEECTTSCEEEEECC
T ss_pred ccccccHhhcCCCcEEEecCCC
Confidence 2223345556789999999885
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.67 E-value=1.4e-05 Score=84.86 Aligned_cols=229 Identities=10% Similarity=-0.022 Sum_probs=140.6
Q ss_pred eeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC-cEE
Q 044075 542 QTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS-EIR 620 (786)
Q Consensus 542 ~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg-~I~ 620 (786)
+.+..+... .....++|+++++++++...++.|..||..... ...+. ....+..+++.++++.+++....++ .|.
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~--~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~ 98 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ--QIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVV 98 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE--EEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCce--EEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEE
Confidence 334444332 457889999999877766678999999987532 22222 2356889999999884443222332 477
Q ss_pred EEeCCCCeeeEeec----CCeEEEEEeCCCCEEEEEE-CCCeEEEEEcCCCcE-EEEEe---------cCCCCEEEEEEc
Q 044075 621 FWNLSQYSCARISK----GGTVQVRFQPRLGLLLAAA-SENVVSIFDVETDRL-THSFK---------GHSTEIHSVCWD 685 (786)
Q Consensus 621 iwDl~~~~~~~~~~----~~i~~i~~sp~g~~Ll~gs-~dg~I~iwD~~t~~~-i~~l~---------~h~~~I~sv~~s 685 (786)
.+|..+++...... .....++..+. ..+++.. .++.|+++|..+++. +.... ..-...+.| +
T Consensus 99 ~~d~~~g~~~~~~~~~~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s 175 (306)
T 2p4o_A 99 SLVKSDGTVETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--K 175 (306)
T ss_dssp EEECTTSCEEEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--E
T ss_pred EEcCCCCeEEEEEeCCCccccCcccccCC-CcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--C
Confidence 77777766543322 11233444444 4455555 478999999876532 21111 111234566 7
Q ss_pred CCCCEEEEEeCC--eEEEEECCC-Cee--EEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEE---ccc
Q 044075 686 TNGEYLASVSQD--SVRVWSLAS-GEC--IHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTI---AAH 757 (786)
Q Consensus 686 pdg~~Lasgs~D--~I~vwDl~s-~~~--i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~---~~h 757 (786)
+++++|+++... .|.+||+.. ++. ...+.. ......++++++|.++++....+.|.+||.. ++...+ ...
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~ 253 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQG 253 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGT
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccc
Confidence 888877666544 899999874 321 111111 1345668899999876666667899999986 554322 223
Q ss_pred CCCeEEEEEc---CCCCEEEEEeCC
Q 044075 758 DCVISALAQS---PVTGMVASASHD 779 (786)
Q Consensus 758 ~~~V~slafs---pdg~~LaSgs~D 779 (786)
....++++|. ++++.|+.++..
T Consensus 254 ~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 254 VIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred cCCceEEEEecccCCCCEEEEECCC
Confidence 3568999998 888877766543
No 257
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.63 E-value=5.4e-06 Score=85.72 Aligned_cols=191 Identities=13% Similarity=0.166 Sum_probs=130.9
Q ss_pred cceeeeeEEeecCCCCe--EEEEEcCCCCEEEEEECCC--eEEEEEcCCCeeeeecCCCCCC-eEEEEEccCCCEEEEEe
Q 044075 496 AFSFNEVSSIRKSSSKV--TCCHFSSDGKLLASAGHDK--KVVVWNMENFQTECTPDDHNHI-ITDVRFRPNSTQLATSS 570 (786)
Q Consensus 496 ~~~~~~v~~l~~H~~~V--~~lafSpdg~~Lasgs~Dg--~V~IWdl~t~~~~~~l~~h~~~-V~sl~fspdg~~Lasgs 570 (786)
.+.++.+.++ .|...- ..+.|+ ++.++.+.+.+| .|+++|+++++.+..+...... -..+++. +..|+...
T Consensus 28 ~~~~~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~lt 103 (262)
T 3nol_A 28 IYDYQIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLT 103 (262)
T ss_dssp EEEEEEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEE
T ss_pred ccceEEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEE
Confidence 3456666666 455443 788998 677677777766 8999999999998887543322 1234443 45555554
Q ss_pred -CCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--------CCeEEEE
Q 044075 571 -FDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--------GGTVQVR 641 (786)
Q Consensus 571 -~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--------~~i~~i~ 641 (786)
.++.+.+||..+.+. +..+.... .-..++ +++..++++- .++.|.++|..+.+.+.... ..+..+.
T Consensus 104 w~~~~v~v~D~~t~~~-~~ti~~~~-eG~glt--~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe 178 (262)
T 3nol_A 104 WKNGLGFVWNIRNLRQ-VRSFNYDG-EGWGLT--HNDQYLIMSD-GTPVLRFLDPESLTPVRTITVTAHGEELPELNELE 178 (262)
T ss_dssp SSSSEEEEEETTTCCE-EEEEECSS-CCCCEE--ECSSCEEECC-SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEE
T ss_pred eeCCEEEEEECccCcE-EEEEECCC-CceEEe--cCCCEEEEEC-CCCeEEEEcCCCCeEEEEEEeccCCccccccceeE
Confidence 588999999998774 44444322 223333 5677777554 47889999999887766543 2233466
Q ss_pred EeCCCCEEEEEE-CCCeEEEEEcCCCcEEEEEecC------------CCCEEEEEEcCCCCEEEEEeCC
Q 044075 642 FQPRLGLLLAAA-SENVVSIFDVETDRLTHSFKGH------------STEIHSVCWDTNGEYLASVSQD 697 (786)
Q Consensus 642 ~sp~g~~Ll~gs-~dg~I~iwD~~t~~~i~~l~~h------------~~~I~sv~~spdg~~Lasgs~D 697 (786)
|. ++ .+++.. .++.|.+.|.++++.+..+... ..-.+.|+|+|+++.|++.+..
T Consensus 179 ~~-~G-~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 179 WV-DG-EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EE-TT-EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EE-CC-EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 65 55 455555 4789999999999998888642 1356899999999888888876
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.62 E-value=3.8e-06 Score=99.52 Aligned_cols=252 Identities=10% Similarity=0.098 Sum_probs=158.1
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCC----CCeEE-EEEccCCCEEEEEeC------CCcEEEEcCCCCcceeee
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHN----HIITD-VRFRPNSTQLATSSF------DKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~----~~V~s-l~fspdg~~Lasgs~------Dg~I~VWdl~s~~~~~~~ 589 (786)
+..|++++.|+.|..+|..+++.+-.+.... ..+.+ ..+. ++ .++++.. +|.|+.||..+++. +..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~-~W~ 193 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVV-KG-KVIIGNGGAEYGVRGFVSAYDADTGKL-AWR 193 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEE-TT-EEEECCBCTTTCCBCEEEEEETTTCCE-EEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEE-CC-EEEEeCCCCCcCCCCEEEEEECCCCcE-EEE
Confidence 4578888889999999999999887764421 11111 1111 34 4555543 58999999999874 332
Q ss_pred ecC---C----------------------------CCCeEEEEEecCCCeEEEEEcCCC-------------------cE
Q 044075 590 YTG---H----------------------------NNHVMSLDFHPKKNDLFCSCDGNS-------------------EI 619 (786)
Q Consensus 590 ~~~---h----------------------------~~~V~sl~~sp~g~~ll~sgs~Dg-------------------~I 619 (786)
+.. . ......+++.|+.+.++ .+..++ .|
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy-~~~~~g~~w~~~~~~~~~gd~l~~~~v 272 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLY-VGTGNGSPWNREVRSPGGGDNLYLSSI 272 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEE-EECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEE-EeCCCCCccccCCCCCCCCCceeeeeE
Confidence 221 0 01112467888766555 555454 49
Q ss_pred EEEeCCCCeeeEeecC------------CeEEEEEeCCCC---EEEEEECCCeEEEEEcCCCcEEEEEecCC--------
Q 044075 620 RFWNLSQYSCARISKG------------GTVQVRFQPRLG---LLLAAASENVVSIFDVETDRLTHSFKGHS-------- 676 (786)
Q Consensus 620 ~iwDl~~~~~~~~~~~------------~i~~i~~sp~g~---~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~-------- 676 (786)
..+|.++++.+-.+.. ......+..+++ .+++++.+|.++++|.++++++..+....
T Consensus 273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d 352 (668)
T 1kv9_A 273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVD 352 (668)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccc
Confidence 9999999987765442 122223334554 58888899999999999999885543211
Q ss_pred ----CCE------------------------EEEEEcCCCCEEEEEe---------------------------------
Q 044075 677 ----TEI------------------------HSVCWDTNGEYLASVS--------------------------------- 695 (786)
Q Consensus 677 ----~~I------------------------~sv~~spdg~~Lasgs--------------------------------- 695 (786)
.++ ..++++|+..++++..
T Consensus 353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p 432 (668)
T 1kv9_A 353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP 432 (668)
T ss_dssp TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred cccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence 000 0256777766655421
Q ss_pred ---CC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCe--EEEEEcCC
Q 044075 696 ---QD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVI--SALAQSPV 769 (786)
Q Consensus 696 ---~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V--~slafspd 769 (786)
.+ .|..||+.+++.+.+.... .++....+...+..+++++.|+.|++||..+++.+........| .-+.+..+
T Consensus 433 ~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~ 511 (668)
T 1kv9_A 433 AAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELA 511 (668)
T ss_dssp GGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred CCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEEC
Confidence 22 6999999999988777654 23333345556788999999999999999999887333222211 22334456
Q ss_pred CC-EEEEEe
Q 044075 770 TG-MVASAS 777 (786)
Q Consensus 770 g~-~LaSgs 777 (786)
|+ +++.++
T Consensus 512 G~~yva~~~ 520 (668)
T 1kv9_A 512 GRQYVAIMA 520 (668)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 66 444443
No 259
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.61 E-value=5.5e-05 Score=82.12 Aligned_cols=237 Identities=11% Similarity=-0.001 Sum_probs=154.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEE-eCCCcEEEEcCCCCcce
Q 044075 508 SSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATS-SFDKTVRIWDAAKPNFC 586 (786)
Q Consensus 508 H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasg-s~Dg~I~VWdl~s~~~~ 586 (786)
+.+..+|.+..++ .+|+.+. ...|+..+++.......+... ..+..++|++....|+.+ ...+.|..+++.....
T Consensus 32 ~~d~~~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~~~~~~~~-~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~- 107 (349)
T 3v64_C 32 RPDRRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLNNL-ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV- 107 (349)
T ss_dssp CTTSSCEEESSSC-CEEEEEC-BSCEEEECTTSCCEEEEECSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred CCCCCcccccccC-ceeEeec-ccceEEEeCCCCeeEEeecCC-CceEEEEEeccccEEEEEeccCCceEEEecCCCCc-
Confidence 3455667777664 3454443 456888888765554444433 457899999866666555 4578899999876542
Q ss_pred eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECC--CeEEEE
Q 044075 587 LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASE--NVVSIF 661 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~d--g~I~iw 661 (786)
.............+++.+.+..++++-...+.|.+.++.......... .....++++|.++.|+.+... +.|..+
T Consensus 108 ~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~ 187 (349)
T 3v64_C 108 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEAS 187 (349)
T ss_dssp EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEE
Confidence 222332334567899998888888787778899999988654333332 456789999987777776653 689999
Q ss_pred EcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEE-CC
Q 044075 662 DVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIG-GY 738 (786)
Q Consensus 662 D~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs-~d 738 (786)
++........+...-...+.|+|++++..|+.+... .|..+|+........+.........+++. .+ .|+.+. ..
T Consensus 188 ~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~-~ly~td~~~ 265 (349)
T 3v64_C 188 SMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-ED-SLYWTDWHT 265 (349)
T ss_dssp ETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TT-EEEEEETTT
T ss_pred eCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CC-EEEEecCCC
Confidence 887543332222234567899999877777666554 89999987544333333334456777773 33 454444 45
Q ss_pred CeEEEEECCCCe
Q 044075 739 QSLELWNMAENK 750 (786)
Q Consensus 739 g~I~IwDl~~~~ 750 (786)
+.|..++..+++
T Consensus 266 ~~V~~~~~~~G~ 277 (349)
T 3v64_C 266 KSINSANKFTGK 277 (349)
T ss_dssp TEEEEEETTTCC
T ss_pred CeEEEEEccCCC
Confidence 688888854443
No 260
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.61 E-value=3.6e-05 Score=92.67 Aligned_cols=267 Identities=10% Similarity=0.033 Sum_probs=170.6
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecC-------CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPD-------DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA 581 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~-------~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~ 581 (786)
...|.++...++|.+.+ |+.+ -|.+||..+.+...... .....|.++...+++. |..|+..+-|.++|..
T Consensus 210 ~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~ 286 (781)
T 3v9f_A 210 GNDVRCIYKDTNGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQ 286 (781)
T ss_dssp CSSEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETT
T ss_pred CCceeEEEEcCCCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCC
Confidence 35799999998887655 4445 68999987665443221 1245799999887775 6667765678889887
Q ss_pred CCcceeeee-------------cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEe------------ecCC
Q 044075 582 KPNFCLQTY-------------TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARI------------SKGG 636 (786)
Q Consensus 582 s~~~~~~~~-------------~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~------------~~~~ 636 (786)
+........ .-....|.++...+++. +. .|..++-|..|+......... ....
T Consensus 287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 364 (781)
T 3v9f_A 287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IW-IGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKV 364 (781)
T ss_dssp CC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EE-EEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSC
T ss_pred CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EE-EEecCCeEEEeCCCCCcceeeccCccccccCCCCCcc
Confidence 654211110 11245789998888776 33 455567788898875443322 1134
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEE---ecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEE
Q 044075 637 TVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSF---KGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHE 712 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l---~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~ 712 (786)
+.+++...++. |.+|+.++-|.+||..++...... ......|.+++.++++.+.+ |+.+ .|.+||..+++....
T Consensus 365 v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~ 442 (781)
T 3v9f_A 365 VSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQII 442 (781)
T ss_dssp EEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEEC
T ss_pred eEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEe
Confidence 66777776655 667777777999998765332211 12346799999888887666 5655 899999887754332
Q ss_pred Ec--cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcc-c-----CCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 044075 713 LS--SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAA-H-----DCVISALAQSPVTGMVASASHDKSVKI 784 (786)
Q Consensus 713 l~--~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~-h-----~~~V~slafspdg~~LaSgs~DG~I~I 784 (786)
.. .....|.++...+++. |.+++. +.|.+||..+++...+.. . ...|.++...++|.+.+....+| |..
T Consensus 443 ~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~ 519 (781)
T 3v9f_A 443 ELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGI 519 (781)
T ss_dssp CSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEE
T ss_pred ccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEE
Confidence 21 2346788888888776 555666 679999988776543322 1 35799999998887665443345 444
Q ss_pred e
Q 044075 785 W 785 (786)
Q Consensus 785 W 785 (786)
|
T Consensus 520 ~ 520 (781)
T 3v9f_A 520 Y 520 (781)
T ss_dssp E
T ss_pred E
Confidence 4
No 261
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.60 E-value=6.8e-06 Score=95.47 Aligned_cols=251 Identities=10% Similarity=-0.014 Sum_probs=155.6
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCC----CCeEE-EEEccCCCEEEEEeC------CCcEEEEcCCCCcceeee
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHN----HIITD-VRFRPNSTQLATSSF------DKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~----~~V~s-l~fspdg~~Lasgs~------Dg~I~VWdl~s~~~~~~~ 589 (786)
+..|++++.|+.|..+|..+++.+-...... ..+.+ .... ++ .+++++. ++.|+.+|..+++. +..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~-~W~ 191 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGEL-KWR 191 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCE-EEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcE-EEE
Confidence 5578888889999999999999887654221 01211 1111 34 5565554 78999999998874 322
Q ss_pred ecCCCC-------------------------------------Ce-EEEEEecCCCeEEEEEcC-----------C----
Q 044075 590 YTGHNN-------------------------------------HV-MSLDFHPKKNDLFCSCDG-----------N---- 616 (786)
Q Consensus 590 ~~~h~~-------------------------------------~V-~sl~~sp~g~~ll~sgs~-----------D---- 616 (786)
+..... .+ ..+++.++...+++..+. |
T Consensus 192 ~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~ 271 (571)
T 2ad6_A 192 AFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWT 271 (571)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTT
T ss_pred EccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeE
Confidence 221100 00 235666766666544321 1
Q ss_pred CcEEEEeCCCCeeeEeecC------------CeEEEEEeCCCC---EEEEEECCCeEEEEEcCCCcEEEEEecCC-----
Q 044075 617 SEIRFWNLSQYSCARISKG------------GTVQVRFQPRLG---LLLAAASENVVSIFDVETDRLTHSFKGHS----- 676 (786)
Q Consensus 617 g~I~iwDl~~~~~~~~~~~------------~i~~i~~sp~g~---~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~----- 676 (786)
+.|..+|.++++.+-.+.. ...-+....+++ .+++++.+|.++++|.++++.+..+....
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 3599999999887655431 111122234664 46778889999999999999887765321
Q ss_pred --------CCE--------------------------EEEEEcCCCCEEEEEe---------------------------
Q 044075 677 --------TEI--------------------------HSVCWDTNGEYLASVS--------------------------- 695 (786)
Q Consensus 677 --------~~I--------------------------~sv~~spdg~~Lasgs--------------------------- 695 (786)
.++ ..++++|+..+|++.+
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 111 1356788777776653
Q ss_pred ----------CC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcccCCCe--E
Q 044075 696 ----------QD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAAHDCVI--S 762 (786)
Q Consensus 696 ----------~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h~~~V--~ 762 (786)
.+ .|..||+.+++.+.++.... .+....+...+..+++++.|+.|++||..+++.+........+ .
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~ 510 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGS 510 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEee
Confidence 23 79999999999887775432 2223333345667888999999999999999987433222222 2
Q ss_pred EEEEcCCCCEEEE
Q 044075 763 ALAQSPVTGMVAS 775 (786)
Q Consensus 763 slafspdg~~LaS 775 (786)
-+.+..+++.++.
T Consensus 511 p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 511 PMTYSFKGKQYIG 523 (571)
T ss_dssp CEEEEETTEEEEE
T ss_pred eEEEEECCEEEEE
Confidence 2335567764443
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.58 E-value=1.4e-05 Score=92.97 Aligned_cols=262 Identities=7% Similarity=0.011 Sum_probs=160.3
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCC---------eEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeec
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHNHI---------ITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYT 591 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~---------V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~ 591 (786)
+..|++++.++.|..+|..+++.+-.+...... ...+++ .+..|++++.|+.|..+|..+++.+-. +.
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~-~~ 144 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWK-KK 144 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEE-EE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEee-ec
Confidence 345666666455999999999988776443221 012222 255788888999999999999884322 22
Q ss_pred CCC----CCeE-EEEEec---CCCeEEEEEc------CCCcEEEEeCCCCeeeEeecCC---e-----------------
Q 044075 592 GHN----NHVM-SLDFHP---KKNDLFCSCD------GNSEIRFWNLSQYSCARISKGG---T----------------- 637 (786)
Q Consensus 592 ~h~----~~V~-sl~~sp---~g~~ll~sgs------~Dg~I~iwDl~~~~~~~~~~~~---i----------------- 637 (786)
... ..+. ...+.. ++..+++.+. .++.|+.+|..+++.+-..... +
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccc
Confidence 111 0111 111121 1222343443 3789999999988766443211 0
Q ss_pred ------------------------EEEEEeCCCCEEEEEEC--------------------C----CeEEEEEcCCCcEE
Q 044075 638 ------------------------VQVRFQPRLGLLLAAAS--------------------E----NVVSIFDVETDRLT 669 (786)
Q Consensus 638 ------------------------~~i~~sp~g~~Ll~gs~--------------------d----g~I~iwD~~t~~~i 669 (786)
..+++.+..+.+++++. | +.|..+|.++++.+
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred cCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 12456677788887773 2 58999999999999
Q ss_pred EEEec--CC--------CCEEEEEEc-CCCC---EEEEEeCC-eEEEEECCCCeeEEEEccCC-------------Cce-
Q 044075 670 HSFKG--HS--------TEIHSVCWD-TNGE---YLASVSQD-SVRVWSLASGECIHELSSSG-------------NKF- 720 (786)
Q Consensus 670 ~~l~~--h~--------~~I~sv~~s-pdg~---~Lasgs~D-~I~vwDl~s~~~i~~l~~~~-------------~~I- 720 (786)
..+.. |. .++. +... .+|+ +++.++.+ .++++|.++++.+..+.... .++
T Consensus 305 W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~ 383 (582)
T 1flg_A 305 WFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVE 383 (582)
T ss_dssp EEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEE
T ss_pred EEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeE
Confidence 88763 32 1221 2222 4674 67778887 99999999999887665432 000
Q ss_pred -------------------------------EEEEEeCCCCEEEEEE---------------------------------
Q 044075 721 -------------------------------HSCIFHPSYPTLMVIG--------------------------------- 736 (786)
Q Consensus 721 -------------------------------~sv~fspdg~~L~sgs--------------------------------- 736 (786)
..++++|+...+++..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~ 463 (582)
T 1flg_A 384 REGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDD 463 (582)
T ss_dssp CTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSS
T ss_pred ccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCC
Confidence 1245666655555433
Q ss_pred CCCeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 737 GYQSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 737 ~dg~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
.+|.|..||+.+++.+-...+...+..-.....+.+++.++.||.|+.||
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D 513 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFD 513 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEE
Confidence 25789999999998773333333332222222466888899999999886
No 263
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.56 E-value=7.4e-05 Score=82.27 Aligned_cols=236 Identities=10% Similarity=-0.019 Sum_probs=153.8
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEE-eCCCcEEEEcCCCCcceee
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATS-SFDKTVRIWDAAKPNFCLQ 588 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasg-s~Dg~I~VWdl~s~~~~~~ 588 (786)
+...|.+..+. .+|+.+. ...|+.+++........+.. ...+..++|.+.+..|+.+ ...+.|..+++..... ..
T Consensus 77 d~~~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~ 152 (386)
T 3v65_B 77 DRRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EE 152 (386)
T ss_dssp TSSCEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE-EE
T ss_pred CCCeECCcccc-ceeEeec-CccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc-EE
Confidence 34556666663 4454443 46788888877655544443 3457899999866555544 4578899999876542 22
Q ss_pred eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECC--CeEEEEEc
Q 044075 589 TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASE--NVVSIFDV 663 (786)
Q Consensus 589 ~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~d--g~I~iwD~ 663 (786)
.+.........+++.+.+..++++-...+.|.+.++.......... .....++++|.+..|+.+... +.|..+++
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 2332334567889998888888787778899999987654333332 456789999988887777653 68999998
Q ss_pred CCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeE
Q 044075 664 ETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSL 741 (786)
Q Consensus 664 ~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I 741 (786)
............-...+.|+|++++..|+.+... .|..+|+........+.........+++. .+..+++-...+.|
T Consensus 233 dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V 311 (386)
T 3v65_B 233 DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSI 311 (386)
T ss_dssp TSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEE
T ss_pred CCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeE
Confidence 7654433333344567899999877777666544 89999987544333343334456777773 33333444455688
Q ss_pred EEEECCCCe
Q 044075 742 ELWNMAENK 750 (786)
Q Consensus 742 ~IwDl~~~~ 750 (786)
..+|..+++
T Consensus 312 ~~~~~~~G~ 320 (386)
T 3v65_B 312 NSANKFTGK 320 (386)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCc
Confidence 888855543
No 264
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.53 E-value=0.00028 Score=75.22 Aligned_cols=224 Identities=7% Similarity=-0.048 Sum_probs=144.1
Q ss_pred EEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEE-eCCCcEEEEcCCCC---cceeeeecCCCCCeE
Q 044075 523 LLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATS-SFDKTVRIWDAAKP---NFCLQTYTGHNNHVM 598 (786)
Q Consensus 523 ~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasg-s~Dg~I~VWdl~s~---~~~~~~~~~h~~~V~ 598 (786)
+|+.+. ...|+..|+.+.+....+.. ...+..++|++.+..|+.+ ..++.|..+++... ......+...-....
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 344443 45688999987765555433 4567899999866555555 45688999998751 211222322234568
Q ss_pred EEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECC--CeEEEEEcCCCcEEEEEe
Q 044075 599 SLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASE--NVVSIFDVETDRLTHSFK 673 (786)
Q Consensus 599 sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~d--g~I~iwD~~t~~~i~~l~ 673 (786)
.+++.+.+..++++-...+.|.++++.......... .....++++|.++.++.+... +.|..+++..........
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~ 160 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 160 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEE
Confidence 899988778888777788999999998654433332 456789999988887777653 689999886443322222
Q ss_pred cCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEcc--CCCceEEEEEeCCCCEEEEEE-CCCeEEEEECCC
Q 044075 674 GHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSS--SGNKFHSCIFHPSYPTLMVIG-GYQSLELWNMAE 748 (786)
Q Consensus 674 ~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~--~~~~I~sv~fspdg~~L~sgs-~dg~I~IwDl~~ 748 (786)
..-.....|++++++..|+.+... .|..+|+........+.. .......+++.. + .|+.+. ..+.|..+|..+
T Consensus 161 ~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~-~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-D-KVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-T-EEEEEETTTTEEEEEETTT
T ss_pred CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-C-EEEEEECCCCeEEEEeCCC
Confidence 334567899999987777666544 899999875332222221 223456777753 3 454444 456899998765
Q ss_pred Ce
Q 044075 749 NK 750 (786)
Q Consensus 749 ~~ 750 (786)
++
T Consensus 239 g~ 240 (316)
T 1ijq_A 239 GS 240 (316)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 265
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.50 E-value=2.7e-05 Score=79.71 Aligned_cols=180 Identities=11% Similarity=0.063 Sum_probs=124.4
Q ss_pred CCC--CCeEEEEEecCCCeEEEEEcCC--CcEEEEeCCCCeeeEeec--CCeEEEEEeCCCCEEEEEE-CCCeEEEEEcC
Q 044075 592 GHN--NHVMSLDFHPKKNDLFCSCDGN--SEIRFWNLSQYSCARISK--GGTVQVRFQPRLGLLLAAA-SENVVSIFDVE 664 (786)
Q Consensus 592 ~h~--~~V~sl~~sp~g~~ll~sgs~D--g~I~iwDl~~~~~~~~~~--~~i~~i~~sp~g~~Ll~gs-~dg~I~iwD~~ 664 (786)
.|. .....+.|+. ..++.+.+.+ ..|+++|+.+++.+.... .......+...++.|+... .++.+.+||..
T Consensus 16 phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECC
Confidence 454 3466899985 5677777765 489999999999887665 3333333333456666655 47999999999
Q ss_pred CCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCC-----CceEEEEEeCCCCEEEEEE-C
Q 044075 665 TDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSG-----NKFHSCIFHPSYPTLMVIG-G 737 (786)
Q Consensus 665 t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~-----~~I~sv~fspdg~~L~sgs-~ 737 (786)
+.+.+.++.... .-..++ +++..|+.+..+ .|.++|..+.+.+.++.... ..+..+.+. ++. |++.. .
T Consensus 94 tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-lyanvw~ 168 (243)
T 3mbr_X 94 TLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-LLANVWL 168 (243)
T ss_dssp TTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETT
T ss_pred cCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-EEEEECC
Confidence 999999988533 224555 455555544445 99999999998888876532 244566665 555 44544 5
Q ss_pred CCeEEEEECCCCeEEEEcc--------------cCCCeEEEEEcCCCCEEEEEeC
Q 044075 738 YQSLELWNMAENKCMTIAA--------------HDCVISALAQSPVTGMVASASH 778 (786)
Q Consensus 738 dg~I~IwDl~~~~~~~~~~--------------h~~~V~slafspdg~~LaSgs~ 778 (786)
+..|.+.|..+++++.... .....+.|+++|+++.|+..+.
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 7799999999999873321 1236789999998887766654
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.50 E-value=3.9e-05 Score=89.26 Aligned_cols=253 Identities=11% Similarity=0.031 Sum_probs=155.2
Q ss_pred CCEEEEEECCCeEEEEEcCCCeeeeecCCCCC----CeE-EEEEcc---CCC-EEEEEe------CCCcEEEEcCCCCcc
Q 044075 521 GKLLASAGHDKKVVVWNMENFQTECTPDDHNH----IIT-DVRFRP---NST-QLATSS------FDKTVRIWDAAKPNF 585 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~----~V~-sl~fsp---dg~-~Lasgs------~Dg~I~VWdl~s~~~ 585 (786)
+..|++++.|+.|..+|..+++.+-....... .+. ...... +++ .+++++ .++.|+.+|..+++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 45788888999999999999998876543221 111 111111 233 566654 378999999998874
Q ss_pred eeeeecCCCC-----------------------------------------CeEEEEEecCCCeEEEEEcC---------
Q 044075 586 CLQTYTGHNN-----------------------------------------HVMSLDFHPKKNDLFCSCDG--------- 615 (786)
Q Consensus 586 ~~~~~~~h~~-----------------------------------------~V~sl~~sp~g~~ll~sgs~--------- 615 (786)
. -....... .-..+++.|+...+++..+.
T Consensus 197 ~-W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 197 I-WMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp E-EEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred E-eecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 2 22211000 00235666666666654431
Q ss_pred ----------C----CcEEEEeCCCCeeeEeecCC---------eE-EEEEe---CCCC---EEEEEECCCeEEEEEcCC
Q 044075 616 ----------N----SEIRFWNLSQYSCARISKGG---------TV-QVRFQ---PRLG---LLLAAASENVVSIFDVET 665 (786)
Q Consensus 616 ----------D----g~I~iwDl~~~~~~~~~~~~---------i~-~i~~s---p~g~---~Ll~gs~dg~I~iwD~~t 665 (786)
| +.|..+|..+++.+-.+... .. .+.+. .+++ .+++++.+|.++++|.++
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 68999999999887654310 11 12222 4564 677888999999999999
Q ss_pred CcEEEEEecCCC--CE-------------------------------------------EEEEEcCCCCEEEEEe-----
Q 044075 666 DRLTHSFKGHST--EI-------------------------------------------HSVCWDTNGEYLASVS----- 695 (786)
Q Consensus 666 ~~~i~~l~~h~~--~I-------------------------------------------~sv~~spdg~~Lasgs----- 695 (786)
++++..+..... .. ..++++|+..++++..
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 998877654210 00 0235566555544432
Q ss_pred ----------------------------CC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 044075 696 ----------------------------QD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNM 746 (786)
Q Consensus 696 ----------------------------~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl 746 (786)
.+ .|..||+.+++.+.+..... ++..-.....+..+++++.|+.|+.||.
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 13 78999999999887765432 2222222234667888999999999999
Q ss_pred CCCeEEEEcccCCCeE--EEEEcCCCC-EEEE
Q 044075 747 AENKCMTIAAHDCVIS--ALAQSPVTG-MVAS 775 (786)
Q Consensus 747 ~~~~~~~~~~h~~~V~--slafspdg~-~LaS 775 (786)
++++.+-.......+. -+.|..+|+ |+++
T Consensus 515 ~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 515 KSGKELWKFQTGSGIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp TTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CCCCEEEEecCCCCcccCceEEEECCEEEEEE
Confidence 9999884333333332 256667777 4443
No 267
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.48 E-value=6.7e-06 Score=98.77 Aligned_cols=243 Identities=12% Similarity=0.034 Sum_probs=138.0
Q ss_pred cCCC-CeEEEEEc-CCCCEEEEEEC-CC----eEEEEEcCCC-eeeeecCCCCCCeEEEEEccCCCEEEEEeCC-----C
Q 044075 507 KSSS-KVTCCHFS-SDGKLLASAGH-DK----KVVVWNMENF-QTECTPDDHNHIITDVRFRPNSTQLATSSFD-----K 573 (786)
Q Consensus 507 ~H~~-~V~~lafS-pdg~~Lasgs~-Dg----~V~IWdl~t~-~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D-----g 573 (786)
+|.- .+...+|| |||++||.+.. +| .|+++|+.++ +.+.. .-......++|+||++.|+....| .
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~~~~~~~~~WspDg~~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KVSGTNGEIVWGPDHTSLFYVTKDETLREN 247 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CEEEECSCCEECSSTTEEEEEEECTTCCEE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cccCceeeEEEecCCCEEEEEEECCCCCCC
Confidence 3443 68889999 99998886543 22 5999999988 63211 001123468899999888877765 3
Q ss_pred cEEEEcCCCCcce-eeeec-CCCCCeEEEEEecCCCeEEEEEcC--CCcEEEEeCCCC--ee--eEeec---CCeEEEEE
Q 044075 574 TVRIWDAAKPNFC-LQTYT-GHNNHVMSLDFHPKKNDLFCSCDG--NSEIRFWNLSQY--SC--ARISK---GGTVQVRF 642 (786)
Q Consensus 574 ~I~VWdl~s~~~~-~~~~~-~h~~~V~sl~~sp~g~~ll~sgs~--Dg~I~iwDl~~~--~~--~~~~~---~~i~~i~~ 642 (786)
.|+++++.++... ...+. ........+.|+|+++.|+++... ...|+++|+.+. .. ..... .....+.|
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~ 327 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM 327 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee
Confidence 5888888765421 22222 223456788999999998877643 346888898764 22 22222 23344444
Q ss_pred eCCCCEEEEEECC-----CeEEEEEcCCCcEEEE-EecCCC--CEEEEEEcCCCCEEEEEeCC---eEEEEEC-------
Q 044075 643 QPRLGLLLAAASE-----NVVSIFDVETDRLTHS-FKGHST--EIHSVCWDTNGEYLASVSQD---SVRVWSL------- 704 (786)
Q Consensus 643 sp~g~~Ll~gs~d-----g~I~iwD~~t~~~i~~-l~~h~~--~I~sv~~spdg~~Lasgs~D---~I~vwDl------- 704 (786)
+. ++.|+..+.. ..|.++|+.+...... +..+.. .+..+.+. .+.++++...+ .|.++|+
T Consensus 328 ~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~~~ 405 (751)
T 2xe4_A 328 HG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDGVF 405 (751)
T ss_dssp ET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTSCC
T ss_pred ee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccccccc
Confidence 43 5655555443 3678888775211112 222433 34555554 23344444444 5778886
Q ss_pred CCCeeEEEEccCC-CceEEEEE----eCCCC-EEEEEECC---CeEEEEECCCCeEEE
Q 044075 705 ASGECIHELSSSG-NKFHSCIF----HPSYP-TLMVIGGY---QSLELWNMAENKCMT 753 (786)
Q Consensus 705 ~s~~~i~~l~~~~-~~I~sv~f----spdg~-~L~sgs~d---g~I~IwDl~~~~~~~ 753 (786)
..++.+..+.... ..+..+.+ ++++. ++++.+.. ..++.+|+.+++...
T Consensus 406 ~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~ 463 (751)
T 2xe4_A 406 KAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTA 463 (751)
T ss_dssp CTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEE
T ss_pred cCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEE
Confidence 3443133443221 22333322 34554 44444433 368888888776543
No 268
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.47 E-value=1.4e-05 Score=82.69 Aligned_cols=176 Identities=10% Similarity=0.063 Sum_probs=123.6
Q ss_pred CeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee-cCCeEEEEEeCCCCEEEEEE-CCCeEEEEEcCCCcEEEEEe
Q 044075 596 HVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS-KGGTVQVRFQPRLGLLLAAA-SENVVSIFDVETDRLTHSFK 673 (786)
Q Consensus 596 ~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~-~~~i~~i~~sp~g~~Ll~gs-~dg~I~iwD~~t~~~i~~l~ 673 (786)
....+.|+ ++.|+.+.+.+|.|+++|+.+++.+... .......-+.++++.|+... .++.+.+||..+.+.+.++.
T Consensus 56 ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 56 FTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp CEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred ccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 34688887 4688889999999999999998876554 33333322334455555554 47999999999999999988
Q ss_pred cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCC-----CceEEEEEeCCCCEEEEEE-CCCeEEEEEC
Q 044075 674 GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSG-----NKFHSCIFHPSYPTLMVIG-GYQSLELWNM 746 (786)
Q Consensus 674 ~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~-----~~I~sv~fspdg~~L~sgs-~dg~I~IwDl 746 (786)
.. ..-..++ ++++.|+.+..+ .|.++|..+.+.+.++.... ..+..+.|. +|. |++.. .++.|.+.|.
T Consensus 134 ~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 134 YS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-IYANIWHSSDVLEIDP 208 (268)
T ss_dssp CS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTCSEEEEECT
T ss_pred CC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEECCCCeEEEEeC
Confidence 53 2223455 567777666645 99999999999888776532 234567776 664 55555 5779999999
Q ss_pred CCCeEEEEcc--------------cCCCeEEEEEcCCCCEEEEEeC
Q 044075 747 AENKCMTIAA--------------HDCVISALAQSPVTGMVASASH 778 (786)
Q Consensus 747 ~~~~~~~~~~--------------h~~~V~slafspdg~~LaSgs~ 778 (786)
.+++++.... -....+.|||+|+++.|+..+.
T Consensus 209 ~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 209 ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 9998873221 1246789999998776665553
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.46 E-value=2.1e-05 Score=91.70 Aligned_cols=249 Identities=10% Similarity=0.020 Sum_probs=150.5
Q ss_pred EEEEECCCeEEEEEcCCCeeeeecCCCC----CCeEE-EEEccCCCEEEEEe------CCCcEEEEcCCCCcceeeeecC
Q 044075 524 LASAGHDKKVVVWNMENFQTECTPDDHN----HIITD-VRFRPNSTQLATSS------FDKTVRIWDAAKPNFCLQTYTG 592 (786)
Q Consensus 524 Lasgs~Dg~V~IWdl~t~~~~~~l~~h~----~~V~s-l~fspdg~~Lasgs------~Dg~I~VWdl~s~~~~~~~~~~ 592 (786)
|++++.|+.|..+|..+++.+-...... ..+++ .... ++ .+++++ .++.|+.+|..+++..-.....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 7888889999999999999887654322 01221 1111 34 455554 3799999999998743222111
Q ss_pred CCC------------------------------------Ce-EEEEEecCCCeEEEEEcC---------------CCcEE
Q 044075 593 HNN------------------------------------HV-MSLDFHPKKNDLFCSCDG---------------NSEIR 620 (786)
Q Consensus 593 h~~------------------------------------~V-~sl~~sp~g~~ll~sgs~---------------Dg~I~ 620 (786)
... .+ ..+++.+....+++..+. .+.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 100 01 134566666655544332 14799
Q ss_pred EEeCCCCeeeEeecCC------------eEEEEEe-CCC---CEEEEEECCCeEEEEEcCCCcEEEEEecCC--------
Q 044075 621 FWNLSQYSCARISKGG------------TVQVRFQ-PRL---GLLLAAASENVVSIFDVETDRLTHSFKGHS-------- 676 (786)
Q Consensus 621 iwDl~~~~~~~~~~~~------------i~~i~~s-p~g---~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~-------- 676 (786)
.+|.++++.+-.+... ..-+... .++ ..++.++.+|.++++|.++++++.......
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~ 361 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSV 361 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccc
Confidence 9999998887554421 1112222 456 356678889999999999999887665211
Q ss_pred -----CCE--------------------------EEEEEcCCCCEEEEEe------------------------------
Q 044075 677 -----TEI--------------------------HSVCWDTNGEYLASVS------------------------------ 695 (786)
Q Consensus 677 -----~~I--------------------------~sv~~spdg~~Lasgs------------------------------ 695 (786)
.++ ..++++|+..++++..
T Consensus 362 ~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 441 (599)
T 1w6s_A 362 DLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPG 441 (599)
T ss_dssp CTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred ccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccC
Confidence 111 1345666666554421
Q ss_pred ---------CC-eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEEEcc-cC-CCeEE
Q 044075 696 ---------QD-SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMTIAA-HD-CVISA 763 (786)
Q Consensus 696 ---------~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~~~~-h~-~~V~s 763 (786)
.. .|..||+.+++.+.+.... .++..-.+...+..+++++.|+.|+.||.++++.+-... .. ....-
T Consensus 442 p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P 520 (599)
T 1w6s_A 442 PKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYP 520 (599)
T ss_dssp TTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred CcCCcccCCCcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEecc
Confidence 23 6888999999888776432 122211223356678889999999999999999873322 11 11223
Q ss_pred EEEcCCCC-EEEE
Q 044075 764 LAQSPVTG-MVAS 775 (786)
Q Consensus 764 lafspdg~-~LaS 775 (786)
+.+..+|+ |+++
T Consensus 521 ~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 521 MTYTHKGTQYVAI 533 (599)
T ss_dssp EEEEETTEEEEEE
T ss_pred EEEEeCCEEEEEE
Confidence 45556776 4443
No 270
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.42 E-value=0.00089 Score=71.66 Aligned_cols=276 Identities=9% Similarity=-0.005 Sum_probs=152.2
Q ss_pred cceeeeeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe---eeee-cCCCCCCeEEEEEccCCCEEEEEeC
Q 044075 496 AFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ---TECT-PDDHNHIITDVRFRPNSTQLATSSF 571 (786)
Q Consensus 496 ~~~~~~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~---~~~~-l~~h~~~V~sl~fspdg~~Lasgs~ 571 (786)
...|+.+.. .....+.+|.|.+++..+++ +.+|.| +...+.++ .+.. .......+.+|.|.+ +. +++++.
T Consensus 24 g~~W~~~~~--~~~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~ 97 (327)
T 2xbg_A 24 YNPWEAIQL--PTTATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGE 97 (327)
T ss_dssp SCCEEEEEC--SCSSCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEE
T ss_pred CCCceEeec--CCCCcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEEC
Confidence 345555542 23457999999888877775 467765 33344333 2221 112345789999986 43 444555
Q ss_pred CCcEEEEcCCCCcceeeee--cCCCCCeEEEEEecCCCeEEEEEcCCCcEEE-EeC-CCCeeeE-eecCCeEEEEEeCCC
Q 044075 572 DKTVRIWDAAKPNFCLQTY--TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRF-WNL-SQYSCAR-ISKGGTVQVRFQPRL 646 (786)
Q Consensus 572 Dg~I~VWdl~s~~~~~~~~--~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~i-wDl-~~~~~~~-~~~~~i~~i~~sp~g 646 (786)
++.|.. ..+.++.-.... ..+...+..|.+.+++ .+++++. ++.|.. .|- .+.+.+. .....+..+.+.+++
T Consensus 98 ~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~-~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~ 174 (327)
T 2xbg_A 98 PPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNG-SAEMITN-VGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSG 174 (327)
T ss_dssp TTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETT-EEEEEET-TCCEEEESSTTSSEEEEECSCCCCEEEEEECTTS
T ss_pred CCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCC-CEEEEeC-CccEEEEcCCCCCCEEeecCCCcceEEEEEcCCC
Confidence 665544 222222111111 1233557788877654 4554554 554432 231 1122221 122456788899887
Q ss_pred CEEEEEECCCeEEE-EEc--CCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEcc----CCCc
Q 044075 647 GLLLAAASENVVSI-FDV--ETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSS----SGNK 719 (786)
Q Consensus 647 ~~Ll~gs~dg~I~i-wD~--~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~----~~~~ 719 (786)
..++++ .++.++. .|- .+.+.+. ......+..+.+.+++.+++++....+++.+...++.-..+.. ....
T Consensus 175 ~~~~~g-~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~ 251 (327)
T 2xbg_A 175 EYVAVS-SRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVG 251 (327)
T ss_dssp CEEEEE-TTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSC
T ss_pred cEEEEE-CCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcc
Confidence 766555 4455444 342 2233332 2355678899999999877665544777664332332222221 1235
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEEEECCCCeEEE-Ec---ccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 720 FHSCIFHPSYPTLMVIGGYQSLELWNMAENKCMT-IA---AHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 720 I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~-~~---~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
+.++.+.+++.. ++++.++.| ++..+.++... +. .+...+.++.|.+++ .++.++.+|.|.-++
T Consensus 252 ~~~v~~~~~~~~-~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 252 FLDLAYRTPNEV-WLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYV 319 (327)
T ss_dssp EEEEEESSSSCE-EEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEEC
T ss_pred eEEEEecCCCEE-EEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEc
Confidence 888999887664 455567766 44555554333 22 134678899997544 566777899887653
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.41 E-value=4.7e-05 Score=85.14 Aligned_cols=230 Identities=12% Similarity=0.065 Sum_probs=136.9
Q ss_pred CeEEEEEcc-CCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC----cEEEEeCCCC
Q 044075 553 IITDVRFRP-NSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS----EIRFWNLSQY 627 (786)
Q Consensus 553 ~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg----~I~iwDl~~~ 627 (786)
....|+|+| ++..|+++...+.|+.+|+.... +..+.........|+|+++++.++++...++ .+.+++....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~--v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY--VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTE--EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCE--EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc
Confidence 457899998 45567766665889999987754 3333334566889999999997886765433 2333443221
Q ss_pred ee---eEeecCCeEEEEEeCCCCEEEEE-ECCCeEEEEEcCCCcEEEEEec-CCCCEEEEEEcCCCCEEEEEeCC--eEE
Q 044075 628 SC---ARISKGGTVQVRFQPRLGLLLAA-ASENVVSIFDVETDRLTHSFKG-HSTEIHSVCWDTNGEYLASVSQD--SVR 700 (786)
Q Consensus 628 ~~---~~~~~~~i~~i~~sp~g~~Ll~g-s~dg~I~iwD~~t~~~i~~l~~-h~~~I~sv~~spdg~~Lasgs~D--~I~ 700 (786)
.. ..........++++|++..|+++ ..++.|..||...+........ .......|+|+|++++|+.+... .|.
T Consensus 216 ~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 216 FKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp SCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 11 11112456778899944444444 4568999999987754222221 22457899999999966666544 898
Q ss_pred EEECCC--Cee--EEEEccC---------------CCceE-EEEEe--------CCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 701 VWSLAS--GEC--IHELSSS---------------GNKFH-SCIFH--------PSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 701 vwDl~s--~~~--i~~l~~~---------------~~~I~-sv~fs--------pdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
+++... ++. +..+.+. -.... .+++. +++..+++-...+.|+.++ .++...
T Consensus 296 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~ 374 (430)
T 3tc9_A 296 RSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVT 374 (430)
T ss_dssp EEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEE
T ss_pred EEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEE
Confidence 887653 221 1222211 01122 44443 2344333333456888888 456555
Q ss_pred EEccc---------C---------CCeEEEEEcCC-CCEEEEEeCCCcEEEe
Q 044075 753 TIAAH---------D---------CVISALAQSPV-TGMVASASHDKSVKIW 785 (786)
Q Consensus 753 ~~~~h---------~---------~~V~slafspd-g~~LaSgs~DG~I~IW 785 (786)
.+.+. . .....|+++++ +.++++-.....|+.+
T Consensus 375 ~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 375 TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEE
Confidence 44332 1 15789999995 5555554455677764
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.38 E-value=0.00076 Score=71.83 Aligned_cols=216 Identities=12% Similarity=0.022 Sum_probs=138.6
Q ss_pred EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCC----CeeeEeec---CCe
Q 044075 565 QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQ----YSCARISK---GGT 637 (786)
Q Consensus 565 ~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~----~~~~~~~~---~~i 637 (786)
+|+.+. ...|+..|+..... .... .....+..++|++.+..++++-..++.|..+++.. ........ ...
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~-~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEY-TSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCC-EEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEEC-CCeEEEEECCCcce-Eehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 344444 35689999987653 2223 23456889999998888888888889999999876 22222222 345
Q ss_pred EEEEEeCCCCEEEEEE-CCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC---CeEEEEECCCCeeEEEE
Q 044075 638 VQVRFQPRLGLLLAAA-SENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ---DSVRVWSLASGECIHEL 713 (786)
Q Consensus 638 ~~i~~sp~g~~Ll~gs-~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~---D~I~vwDl~s~~~i~~l 713 (786)
..+++.+.++.|+++. ..+.|.++|.........+.........++++|.+.+|+.+.. ..|..+++... ....+
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~ 158 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSL 158 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEE
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEE
Confidence 7888987766666664 4689999998865444334434456789999996665555443 27888887543 33333
Q ss_pred -ccCCCceEEEEEeCCCCEEEEEECC-CeEEEEECCCCeEEEEcc---cCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 714 -SSSGNKFHSCIFHPSYPTLMVIGGY-QSLELWNMAENKCMTIAA---HDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 714 -~~~~~~I~sv~fspdg~~L~sgs~d-g~I~IwDl~~~~~~~~~~---h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
...-.....+++++++..|+.+... +.|..+|+.......+.. .......|++. .+.++++-...+.|..+
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSA 234 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEE
Confidence 2334567899999988888777654 589999997644333321 23446778875 34455555455666654
No 273
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.38 E-value=0.00019 Score=76.86 Aligned_cols=225 Identities=9% Similarity=-0.023 Sum_probs=143.3
Q ss_pred EEEEEECCCeEEEEEcCCCe-eeeecCCCCCCeEEEEEccCCCEEE-EEeCCCcEEEEcCCCCcceeeeecCCCCCeEEE
Q 044075 523 LLASAGHDKKVVVWNMENFQ-TECTPDDHNHIITDVRFRPNSTQLA-TSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSL 600 (786)
Q Consensus 523 ~Lasgs~Dg~V~IWdl~t~~-~~~~l~~h~~~V~sl~fspdg~~La-sgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl 600 (786)
+|+.+ ....|+.++++... ....+......+..+.|.+.+..|+ +-...+.|..+++.........+...-.....+
T Consensus 6 ~ll~~-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gl 84 (318)
T 3sov_A 6 LLLYA-NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 84 (318)
T ss_dssp EEEEE-CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEE
T ss_pred EEEEE-ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEE
Confidence 34443 34678889988653 1111111223467899998655554 445578899999876532122222223456789
Q ss_pred EEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEEC--CCeEEEEEcCCCcEEEEEecC
Q 044075 601 DFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAAS--ENVVSIFDVETDRLTHSFKGH 675 (786)
Q Consensus 601 ~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~--dg~I~iwD~~t~~~i~~l~~h 675 (786)
++.+.+..++++-...+.|.++++.......... .....+++.|.++.|+.+.. .+.|..+++........+...
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~ 164 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE 164 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC
Confidence 9998788888787778899999998644333322 45678999998888877774 578999988754333323333
Q ss_pred CCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEE-CCCeEEEEECCCCe
Q 044075 676 STEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIG-GYQSLELWNMAENK 750 (786)
Q Consensus 676 ~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs-~dg~I~IwDl~~~~ 750 (786)
-...+.|+|++++..|+.+... .|..+|+........+.........+++..+ .++.+. ..+.|..++..+++
T Consensus 165 l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~--~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 165 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT--EEEEEETTTTEEEEEETTTCC
T ss_pred CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC--EEEEEecCCCeEEEEECCCCC
Confidence 4567899999977777666554 8999998754333233333445667777533 444444 45689999986654
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.37 E-value=0.00025 Score=76.84 Aligned_cols=205 Identities=8% Similarity=-0.020 Sum_probs=136.3
Q ss_pred CCCeEEEEEcCCCCEEEEE-ECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEE-EEEeCCCcEEEEcCCCCcce
Q 044075 509 SSKVTCCHFSSDGKLLASA-GHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQL-ATSSFDKTVRIWDAAKPNFC 586 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasg-s~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~L-asgs~Dg~I~VWdl~s~~~~ 586 (786)
...+..++|++.+..|+.. ...+.|..++++.......+.........+++.+.+..| ++-...+.|.+.+++... .
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~ 150 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-R 150 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-C
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-e
Confidence 3458899999865555544 467889999988765444443333456788998755544 555556889999987543 2
Q ss_pred eeeecCCCCCeEEEEEecCCCeEEEEEcCC-CcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEEC-CCeEEEE
Q 044075 587 LQTYTGHNNHVMSLDFHPKKNDLFCSCDGN-SEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAAS-ENVVSIF 661 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D-g~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~-dg~I~iw 661 (786)
.......-.....|+++|.+..++++-... +.|..+++.......... .....++++++++.|+.+.. .+.|..+
T Consensus 151 ~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 151 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence 223333345678999999888888777666 889999987644333322 34678999998888877765 5789999
Q ss_pred EcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc
Q 044075 662 DVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS 715 (786)
Q Consensus 662 D~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~ 715 (786)
|+........+.........|++. ++.++++-... .|..++..+++.+..+..
T Consensus 231 ~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 231 NLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRN 284 (349)
T ss_dssp ETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred eCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEecc
Confidence 987654333343344566788883 44444444344 888888767766555543
No 275
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.34 E-value=9.4e-05 Score=82.71 Aligned_cols=233 Identities=9% Similarity=0.128 Sum_probs=142.2
Q ss_pred CeEEEEEcC-CCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCC-C----cEEEEcCCCCc
Q 044075 511 KVTCCHFSS-DGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFD-K----TVRIWDAAKPN 584 (786)
Q Consensus 511 ~V~~lafSp-dg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~D-g----~I~VWdl~s~~ 584 (786)
....|+|+| ++..|+++...+.|+.+|+++........ .......|+|+++++.|+++... + .+.+++.. +.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 467899998 45667666655889999998766554443 44568899999999977666652 1 23334432 22
Q ss_pred ce-eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec----CCeEEEEEeCCCCEEEEEEC-CCeE
Q 044075 585 FC-LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK----GGTVQVRFQPRLGLLLAAAS-ENVV 658 (786)
Q Consensus 585 ~~-~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----~~i~~i~~sp~g~~Ll~gs~-dg~I 658 (786)
.. ...+. .......++++|++..++++-..++.|..|+........... .....++|+|++++|+++.. .+.|
T Consensus 216 ~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 11 12222 123467888999666677677778899999998766522222 24678999999997666654 6789
Q ss_pred EEEEcCC--CcE--EEEEecC---------------CCCEE-EEEEc--------CCCCEEEEEeCC-eEEEEECCCCee
Q 044075 659 SIFDVET--DRL--THSFKGH---------------STEIH-SVCWD--------TNGEYLASVSQD-SVRVWSLASGEC 709 (786)
Q Consensus 659 ~iwD~~t--~~~--i~~l~~h---------------~~~I~-sv~~s--------pdg~~Lasgs~D-~I~vwDl~s~~~ 709 (786)
..++... +.. +..+.+. -.... .++.. +++.++++-... .|+.++ .++..
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v 373 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRV 373 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcE
Confidence 9987653 221 1122211 01123 45553 345555554444 899998 45543
Q ss_pred EEEEcc---------C--------CCceEEEEEeCCCCEEEEEEC-CCeEEEEECC
Q 044075 710 IHELSS---------S--------GNKFHSCIFHPSYPTLMVIGG-YQSLELWNMA 747 (786)
Q Consensus 710 i~~l~~---------~--------~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl~ 747 (786)
....-. . -.....+++++++..|+++.. ...|+.++++
T Consensus 374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 333211 0 114678899986445555544 4578777654
No 276
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.34 E-value=0.00016 Score=79.44 Aligned_cols=214 Identities=8% Similarity=-0.035 Sum_probs=139.8
Q ss_pred CCCeEEEEEcCCCCEEE-EEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEE-EEEeCCCcEEEEcCCCCcce
Q 044075 509 SSKVTCCHFSSDGKLLA-SAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQL-ATSSFDKTVRIWDAAKPNFC 586 (786)
Q Consensus 509 ~~~V~~lafSpdg~~La-sgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~L-asgs~Dg~I~VWdl~s~~~~ 586 (786)
...+..++|++.+..|+ +-...+.|..++++.......+.........+++.+.+..| ++-...+.|.+.+++... .
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-~ 193 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-R 193 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-C
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-e
Confidence 34588999998655555 44467889999988765544443333455778888755555 444556789888887543 2
Q ss_pred eeeecCCCCCeEEEEEecCCCeEEEEEcCC-CcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEEC-CCeEEEE
Q 044075 587 LQTYTGHNNHVMSLDFHPKKNDLFCSCDGN-SEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAAS-ENVVSIF 661 (786)
Q Consensus 587 ~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D-g~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~-dg~I~iw 661 (786)
...+.........|+++|.+..++++-... +.|..+++.......... .....++++++++.|+++.. .+.|..+
T Consensus 194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~ 273 (386)
T 3v65_B 194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 273 (386)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence 233333345679999999888888776666 789999987654433332 34678999988888777766 4789999
Q ss_pred EcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEE
Q 044075 662 DVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCI 724 (786)
Q Consensus 662 D~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~ 724 (786)
|+........+.........|++. ++.++++-... .|..+|..+++.+..+.........++
T Consensus 274 d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~ 336 (386)
T 3v65_B 274 NLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIH 336 (386)
T ss_dssp CTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEE
T ss_pred eCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEE
Confidence 987554333343344567788883 44444444444 898898777766666554333333343
No 277
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.32 E-value=0.00018 Score=74.49 Aligned_cols=195 Identities=10% Similarity=0.139 Sum_probs=130.2
Q ss_pred eecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec----CCeEEEEEeCCCCEEEEEECCCeEEEEEcC
Q 044075 589 TYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK----GGTVQVRFQPRLGLLLAAASENVVSIFDVE 664 (786)
Q Consensus 589 ~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~ 664 (786)
.+.+-...+..++|+|+++.|+++...++.|...|.. ++.++... .....+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4455667899999999989899888889999999998 66666543 356778888887655554456889999887
Q ss_pred CCcE---EEEEe------cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECC---CCeeEEEEc-------cCCCceEEEE
Q 044075 665 TDRL---THSFK------GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLA---SGECIHELS-------SSGNKFHSCI 724 (786)
Q Consensus 665 t~~~---i~~l~------~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~---s~~~i~~l~-------~~~~~I~sv~ 724 (786)
.... +.... ........|+|+|.+..|+++.+. ...||.+. ....+..+. ..-..+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 6532 22222 134456899999998777766655 44444433 111122221 1234578999
Q ss_pred EeCCCCEEEEEECC-CeEEEEECCCCeEEEEccc---------CCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 725 FHPSYPTLMVIGGY-QSLELWNMAENKCMTIAAH---------DCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 725 fspdg~~L~sgs~d-g~I~IwDl~~~~~~~~~~h---------~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
++|....+++.+.. ..|.++|........+.-. -..-..|+|.++|++.+ .++-+.+.+|
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n~~y~f 249 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPNRFYRF 249 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTTEEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCceEEEE
Confidence 99987777666655 5888999876533222211 12568999999998554 4677766655
No 278
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.31 E-value=0.0017 Score=71.69 Aligned_cols=225 Identities=7% Similarity=-0.046 Sum_probs=148.2
Q ss_pred CEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe-CCCcEEEEcCCCCc---ceeeeecCCCCCe
Q 044075 522 KLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS-FDKTVRIWDAAKPN---FCLQTYTGHNNHV 597 (786)
Q Consensus 522 ~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~I~VWdl~s~~---~~~~~~~~h~~~V 597 (786)
.+|+.+. ...|+..+++.......+. ....+..|+|++.+..|+.+. ..+.|+.+++.... .............
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred ceeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 3454443 5789999988765544443 345688999998666665554 56789999886521 1122333344567
Q ss_pred EEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEEC--CCeEEEEEcCCCcEEEEE
Q 044075 598 MSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAAS--ENVVSIFDVETDRLTHSF 672 (786)
Q Consensus 598 ~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~--dg~I~iwD~~t~~~i~~l 672 (786)
..|++.+.+..|+++-...+.|.+.+++......... .....++++|.++.|+.+.. .+.|..+++........+
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 8999998778888787788999999998765444433 34678999998888877764 378999998765444434
Q ss_pred ecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEcc--CCCceEEEEEeCCCCEEEEEE-CCCeEEEEECC
Q 044075 673 KGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSS--SGNKFHSCIFHPSYPTLMVIG-GYQSLELWNMA 747 (786)
Q Consensus 673 ~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~--~~~~I~sv~fspdg~~L~sgs-~dg~I~IwDl~ 747 (786)
...-.....|++++++..|+.+... .|..+|+........+.. .......+++. +..|+... ..+.|..+|..
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESS
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcC
Confidence 4344678999999988777776654 899999875433322222 22345566663 33454444 45688888866
Q ss_pred CCe
Q 044075 748 ENK 750 (786)
Q Consensus 748 ~~~ 750 (786)
+++
T Consensus 320 ~G~ 322 (400)
T 3p5b_L 320 TGS 322 (400)
T ss_dssp SCC
T ss_pred CCC
Confidence 554
No 279
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.26 E-value=0.00036 Score=77.98 Aligned_cols=233 Identities=10% Similarity=0.099 Sum_probs=141.2
Q ss_pred CCeEEEEEcCC--CCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCC-----cEEEEcCCC
Q 044075 510 SKVTCCHFSSD--GKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDK-----TVRIWDAAK 582 (786)
Q Consensus 510 ~~V~~lafSpd--g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg-----~I~VWdl~s 582 (786)
....+++|+|+ +..|+.+...+.|+.+|..++...... .......+|+|+++++ |+++...+ .+...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 34678999984 445666554488999999877766544 3445689999999999 55554321 233333322
Q ss_pred CcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee-eEeec----CCeEEEEEeCCCCEEEEEEC-CC
Q 044075 583 PNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC-ARISK----GGTVQVRFQPRLGLLLAAAS-EN 656 (786)
Q Consensus 583 ~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~-~~~~~----~~i~~i~~sp~g~~Ll~gs~-dg 656 (786)
.......+. .......++++|++..++++-..++.|+.+|..++.. ..... .....++|+|++++|+++.. .+
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 111011111 2344577889995566776666788999999986655 22221 22346999999997766665 57
Q ss_pred eEEEEEcCC--CcE--EEEEecC---------------CCCEEEEEE---------cCCCCEEEEEeCC-eEEEEECCCC
Q 044075 657 VVSIFDVET--DRL--THSFKGH---------------STEIHSVCW---------DTNGEYLASVSQD-SVRVWSLASG 707 (786)
Q Consensus 657 ~I~iwD~~t--~~~--i~~l~~h---------------~~~I~sv~~---------spdg~~Lasgs~D-~I~vwDl~s~ 707 (786)
.|+.++... +.. ...+.+. -.....+++ .+++.++++-... .|+.++. ++
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G 374 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG 374 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC
Confidence 899988652 321 1122211 123567999 6777777666666 8999985 55
Q ss_pred eeEEEEccCC------------------CceEEEEEeCCCCEEEEEE-CCCeEEEEECC
Q 044075 708 ECIHELSSSG------------------NKFHSCIFHPSYPTLMVIG-GYQSLELWNMA 747 (786)
Q Consensus 708 ~~i~~l~~~~------------------~~I~sv~fspdg~~L~sgs-~dg~I~IwDl~ 747 (786)
... ++.+.. .....++++|....|+++. ..+.|+.++++
T Consensus 375 ~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 375 RVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 433 332211 2356788884333444444 44577777654
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.25 E-value=0.001 Score=73.54 Aligned_cols=217 Identities=11% Similarity=0.030 Sum_probs=142.0
Q ss_pred EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC----eeeEeec---CCe
Q 044075 565 QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY----SCARISK---GGT 637 (786)
Q Consensus 565 ~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~----~~~~~~~---~~i 637 (786)
+|+.+. ...|+..++..... ..+......+..|+|++.+..++++-...+.|+.+++... ....... ...
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~--~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEY--TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSC--EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEec-cceeEEEccCCcce--eEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 455444 46789999887653 2233345678999999988888878777889999998752 2222222 456
Q ss_pred EEEEEeCCCCEEEEEEC-CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC--C-eEEEEECCCCeeEEEE
Q 044075 638 VQVRFQPRLGLLLAAAS-ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ--D-SVRVWSLASGECIHEL 713 (786)
Q Consensus 638 ~~i~~sp~g~~Ll~gs~-dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~--D-~I~vwDl~s~~~i~~l 713 (786)
..+++.+.++.|+.+.. .+.|.+++++.......+.........|+++|.+.+|+.... . .|...++........+
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 78899986666666654 688999999876555555444556889999997666655542 2 7888888754443333
Q ss_pred ccCCCceEEEEEeCCCCEEEEEEC-CCeEEEEECCCCeEEEEcc---cCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 714 SSSGNKFHSCIFHPSYPTLMVIGG-YQSLELWNMAENKCMTIAA---HDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 714 ~~~~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl~~~~~~~~~~---h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
...-.....+++++++..|+.+.. .+.|..+|+.......+.. .-....+|++. .+.++++-...+.|..+
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~ 316 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSA 316 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEE
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEE
Confidence 333456789999998888888765 4589999997655443322 23345677763 23344444445566544
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.23 E-value=0.00023 Score=79.65 Aligned_cols=229 Identities=13% Similarity=0.129 Sum_probs=137.5
Q ss_pred CeEEEEEccC--CCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC---C-cEEEEeCCC
Q 044075 553 IITDVRFRPN--STQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN---S-EIRFWNLSQ 626 (786)
Q Consensus 553 ~V~sl~fspd--g~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D---g-~I~iwDl~~ 626 (786)
....|+|+|+ +..|+++...+.|+.+|..++. +..+........+++|+++++ ++++.... . .+..++...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~--v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQY--VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTE--EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCE--EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 4578999984 4556666555889999987665 344444456689999999998 66555422 1 233333222
Q ss_pred Cee---eEeecCCeEEEEEeCCCCEEEEE-ECCCeEEEEEcCCCcEEEEE-ec-CCCCEEEEEEcCCCCEEEEEeCC--e
Q 044075 627 YSC---ARISKGGTVQVRFQPRLGLLLAA-ASENVVSIFDVETDRLTHSF-KG-HSTEIHSVCWDTNGEYLASVSQD--S 698 (786)
Q Consensus 627 ~~~---~~~~~~~i~~i~~sp~g~~Ll~g-s~dg~I~iwD~~t~~~i~~l-~~-h~~~I~sv~~spdg~~Lasgs~D--~ 698 (786)
... ....-.....++++++...|+++ ..++.|+.+|..++.....+ .. ....-..|+|+|++++|+.+... .
T Consensus 217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 111 11112345668889944444444 45688999999877663322 21 22334579999999966666544 8
Q ss_pred EEEEECC--CCee--EEEEccC---------------CCceEEEEE---------eCCCCEEEEEECCCeEEEEECCCCe
Q 044075 699 VRVWSLA--SGEC--IHELSSS---------------GNKFHSCIF---------HPSYPTLMVIGGYQSLELWNMAENK 750 (786)
Q Consensus 699 I~vwDl~--s~~~--i~~l~~~---------------~~~I~sv~f---------spdg~~L~sgs~dg~I~IwDl~~~~ 750 (786)
|+.++.. ++.. ...+.+. -.....+++ .+++.++++-...+.|+.++. ++.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~ 375 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR 375 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence 9998865 2321 1122111 123566888 566655555445668999985 555
Q ss_pred EEEEccc------------------CCCeEEEEEc-CCCCEEEEEeCCCcEEEe
Q 044075 751 CMTIAAH------------------DCVISALAQS-PVTGMVASASHDKSVKIW 785 (786)
Q Consensus 751 ~~~~~~h------------------~~~V~slafs-pdg~~LaSgs~DG~I~IW 785 (786)
...+.+. -.....|+++ +++.++++-...+.|+.+
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 429 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKI 429 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEE
Confidence 5544332 1236789999 566555555556677765
No 282
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.22 E-value=3.8e-05 Score=92.19 Aligned_cols=188 Identities=14% Similarity=0.146 Sum_probs=119.9
Q ss_pred CeEEEEEe-cCCCeEEEEEcCCC----cEEEEeCCCC-eeeE-eecCCeEEEEEeCCCCEEEEEECC-----CeEEEEEc
Q 044075 596 HVMSLDFH-PKKNDLFCSCDGNS----EIRFWNLSQY-SCAR-ISKGGTVQVRFQPRLGLLLAAASE-----NVVSIFDV 663 (786)
Q Consensus 596 ~V~sl~~s-p~g~~ll~sgs~Dg----~I~iwDl~~~-~~~~-~~~~~i~~i~~sp~g~~Ll~gs~d-----g~I~iwD~ 663 (786)
.+....|+ |+|+.++++.+.+| .|+++|+.++ +.+. .+......++|+|+++.|+....+ ..|+++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 57889999 99998887776554 4999999988 6321 112223467899999988888765 36888998
Q ss_pred CCCc--EEEEEe-cCCCCEEEEEEcCCCCEEEEEeC---C-eEEEEECCCC--ee-EEEEc-cCCCceEEEEEeCCCCEE
Q 044075 664 ETDR--LTHSFK-GHSTEIHSVCWDTNGEYLASVSQ---D-SVRVWSLASG--EC-IHELS-SSGNKFHSCIFHPSYPTL 732 (786)
Q Consensus 664 ~t~~--~i~~l~-~h~~~I~sv~~spdg~~Lasgs~---D-~I~vwDl~s~--~~-i~~l~-~~~~~I~sv~fspdg~~L 732 (786)
.++. ....+. ........+.|+|||++|+..+. . .|.++|+.++ +. +..+. .......++.|+. +..|
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l 333 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHL 333 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTEE
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCEE
Confidence 8763 223333 23345678899999998876652 2 6999999875 23 13333 2344555555554 5555
Q ss_pred EEEECC-----CeEEEEECCC-CeEEE-EcccCC--CeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 733 MVIGGY-----QSLELWNMAE-NKCMT-IAAHDC--VISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 733 ~sgs~d-----g~I~IwDl~~-~~~~~-~~~h~~--~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
+..+.. ..|.++|+.+ +.... +..|.. .+..+.+. .+.++++...||..+||
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEE
T ss_pred EEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEE
Confidence 555443 2677888875 33223 344443 45556665 33466677778876654
No 283
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.19 E-value=0.0015 Score=67.44 Aligned_cols=199 Identities=11% Similarity=0.100 Sum_probs=133.4
Q ss_pred EEeecCCCCeEEEEEcCCCCEE-EEEECCCeEEEEEcCCCeeeeecCC-CCCCeEEEEEccCCCEEEEEeCCCcEEEEcC
Q 044075 503 SSIRKSSSKVTCCHFSSDGKLL-ASAGHDKKVVVWNMENFQTECTPDD-HNHIITDVRFRPNSTQLATSSFDKTVRIWDA 580 (786)
Q Consensus 503 ~~l~~H~~~V~~lafSpdg~~L-asgs~Dg~V~IWdl~t~~~~~~l~~-h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl 580 (786)
+.+.+-.+.+..++|+|++..| ++...++.|...|.. ++.+..+.- -......|++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 3555666789999999976655 457778889999988 777777632 2245788999988876666656788999988
Q ss_pred CCCcc--eeeee------cCCCCCeEEEEEecCCCeEEEEEcCCC-cEEEEeC-CCCeeeEee----------cCCeEEE
Q 044075 581 AKPNF--CLQTY------TGHNNHVMSLDFHPKKNDLFCSCDGNS-EIRFWNL-SQYSCARIS----------KGGTVQV 640 (786)
Q Consensus 581 ~s~~~--~~~~~------~~h~~~V~sl~~sp~g~~ll~sgs~Dg-~I~iwDl-~~~~~~~~~----------~~~i~~i 640 (786)
..... .+... .........|+|+|.++.+++++..+. .|+.|+- .....+... ......+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 66542 11111 123455799999999988887766554 5555551 011111111 1356789
Q ss_pred EEeCCCCEEEEEECC-CeEEEEEcCCCcEEEEEecCC---------CCEEEEEEcCCCCEEEEEeCC-eEEEEEC
Q 044075 641 RFQPRLGLLLAAASE-NVVSIFDVETDRLTHSFKGHS---------TEIHSVCWDTNGEYLASVSQD-SVRVWSL 704 (786)
Q Consensus 641 ~~sp~g~~Ll~gs~d-g~I~iwD~~t~~~i~~l~~h~---------~~I~sv~~spdg~~Lasgs~D-~I~vwDl 704 (786)
+++|..+.+++.+.+ ..|.++|.. ++.+..+.-.. ..-..|+|+++|+++++ ++. .+++|.-
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 999988877777664 778889876 44555444221 25689999999986666 555 7777754
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.19 E-value=0.00038 Score=74.88 Aligned_cols=192 Identities=18% Similarity=0.241 Sum_probs=128.9
Q ss_pred CCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccC----CC---EEEEEeC---CCcEEEEcCCCCcceeee
Q 044075 520 DGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPN----ST---QLATSSF---DKTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 520 dg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspd----g~---~Lasgs~---Dg~I~VWdl~s~~~~~~~ 589 (786)
...+++.....+-+.+||+ +++.+..+.. +.++.|..-|+ ++ ++++... +++|++|++......+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3456666667888999999 7888888754 56777777663 22 2333333 478999977422212333
Q ss_pred ecC------CC-CCeEEEEE--ecC-CCeEEEEEcCCCcEEEEeCC-------CCeeeEeec--CCeEEEEEeCCCCEEE
Q 044075 590 YTG------HN-NHVMSLDF--HPK-KNDLFCSCDGNSEIRFWNLS-------QYSCARISK--GGTVQVRFQPRLGLLL 650 (786)
Q Consensus 590 ~~~------h~-~~V~sl~~--sp~-g~~ll~sgs~Dg~I~iwDl~-------~~~~~~~~~--~~i~~i~~sp~g~~Ll 650 (786)
+.. .. ..+..+|+ +|. +...++....+|.+..|++. +.+.++.+. +.+..|.+.+....|+
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLY 195 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEE
Confidence 311 11 56677777 664 44456677788999999883 234445444 5667788899999999
Q ss_pred EEECCCeEEEEEcC-----CCcEEEEEe-cC-CCCEEEEEE--cCCCC-EEEEEeCC--eEEEEECC-CCeeEEEEc
Q 044075 651 AAASENVVSIFDVE-----TDRLTHSFK-GH-STEIHSVCW--DTNGE-YLASVSQD--SVRVWSLA-SGECIHELS 714 (786)
Q Consensus 651 ~gs~dg~I~iwD~~-----t~~~i~~l~-~h-~~~I~sv~~--spdg~-~Lasgs~D--~I~vwDl~-s~~~i~~l~ 714 (786)
++-.+.-|..||.+ +.+.+..+. ++ ...+..|++ .++++ ||++.+.+ ++.|||.. +.+.+..|.
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 99999888888866 345665553 22 246888888 45555 67777644 99999997 677777774
No 285
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.19 E-value=5.1e-05 Score=89.54 Aligned_cols=223 Identities=8% Similarity=0.010 Sum_probs=129.9
Q ss_pred EEEEcc-CCCEEEEEeCCC-----------cEEEEcCCCCcceee-ee-cCCCCCeEEEEEecCCCeEEEEEc-CCCcEE
Q 044075 556 DVRFRP-NSTQLATSSFDK-----------TVRIWDAAKPNFCLQ-TY-TGHNNHVMSLDFHPKKNDLFCSCD-GNSEIR 620 (786)
Q Consensus 556 sl~fsp-dg~~Lasgs~Dg-----------~I~VWdl~s~~~~~~-~~-~~h~~~V~sl~~sp~g~~ll~sgs-~Dg~I~ 620 (786)
.+++.+ ++++++.|+.+. .+.+||+.+.+.... .+ ..+.....++++..++..++ .|+ .+..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv-~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVV-TGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEE-ECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEE-eCCCCCCceE
Confidence 566777 888888887643 588999988764222 12 22333444577777766554 555 566899
Q ss_pred EEeCCCCeeeEeec----CCeEEEEEeCCCCEEEEEE-CC-----CeEEEEEcCCCcEEEEE----ecCCCCEEEEEEcC
Q 044075 621 FWNLSQYSCARISK----GGTVQVRFQPRLGLLLAAA-SE-----NVVSIFDVETDRLTHSF----KGHSTEIHSVCWDT 686 (786)
Q Consensus 621 iwDl~~~~~~~~~~----~~i~~i~~sp~g~~Ll~gs-~d-----g~I~iwD~~t~~~i~~l----~~h~~~I~sv~~sp 686 (786)
+||..+.+...... ..-..+++.++++.+++|+ .+ ..+.+||..+.+-...- ......-....+..
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 99998766544322 1123455667889888888 34 57999999887543320 00000000011123
Q ss_pred CCCEEEEEe----------CCeEEEEECCCCeeEEEEccCC---------CceEEEEEeC-CCCEEEEEECCC-------
Q 044075 687 NGEYLASVS----------QDSVRVWSLASGECIHELSSSG---------NKFHSCIFHP-SYPTLMVIGGYQ------- 739 (786)
Q Consensus 687 dg~~Lasgs----------~D~I~vwDl~s~~~i~~l~~~~---------~~I~sv~fsp-dg~~L~sgs~dg------- 739 (786)
++..++.++ .+.+..||..+........... ..-.++.|.. +++.+++|+.++
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 334333332 2368899998775443322221 1234445544 566666666432
Q ss_pred ----eEEEEECCCCeEEEEc---ccCCCe-EEEEEcCCCCEEEEEeCC
Q 044075 740 ----SLELWNMAENKCMTIA---AHDCVI-SALAQSPVTGMVASASHD 779 (786)
Q Consensus 740 ----~I~IwDl~~~~~~~~~---~h~~~V-~slafspdg~~LaSgs~D 779 (786)
.|.+||..+.....+. .+.... .++++.|++++++.|+.+
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~ 476 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQR 476 (656)
T ss_dssp CCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBS
T ss_pred CcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcc
Confidence 6888998888766543 222222 345667899999999865
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.18 E-value=0.0013 Score=70.39 Aligned_cols=219 Identities=9% Similarity=-0.022 Sum_probs=138.3
Q ss_pred EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee--eEee--cCCeEEE
Q 044075 565 QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC--ARIS--KGGTVQV 640 (786)
Q Consensus 565 ~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~--~~~~--~~~i~~i 640 (786)
+|+.+. ...|+.++++...............+..++|++.+..++++-...+.|..+++..... .... -.....+
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gl 84 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 84 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEE
Confidence 344433 4679999998753112222222245778999998888887877889999999886532 1111 1456678
Q ss_pred EEeCCCCEEEEEE-CCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC--C-eEEEEECCCCeeEEEEccC
Q 044075 641 RFQPRLGLLLAAA-SENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ--D-SVRVWSLASGECIHELSSS 716 (786)
Q Consensus 641 ~~sp~g~~Ll~gs-~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~--D-~I~vwDl~s~~~i~~l~~~ 716 (786)
++.+.++.|+.+. ..+.|.++++........+.........|+++|.+.+|+.... . .|..+++........+...
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~ 164 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE 164 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC
Confidence 8988666666665 4678999998765433333344566789999987666655542 3 7888887643322222233
Q ss_pred CCceEEEEEeCCCCEEEEEEC-CCeEEEEECCCCeEEEE-cccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 717 GNKFHSCIFHPSYPTLMVIGG-YQSLELWNMAENKCMTI-AAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 717 ~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl~~~~~~~~-~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
-.....+++++++..|+.+.. .+.|..+|+.......+ .........+++.. +.++++-...+.|..+
T Consensus 165 l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 165 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILAC 234 (318)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEE
Confidence 345689999998887777765 46899999976443332 22344566777753 3344444444555544
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.16 E-value=0.0017 Score=78.02 Aligned_cols=234 Identities=7% Similarity=-0.038 Sum_probs=150.9
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEE-eCCCcEEEEcCCCCc---cee
Q 044075 512 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATS-SFDKTVRIWDAAKPN---FCL 587 (786)
Q Consensus 512 V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasg-s~Dg~I~VWdl~s~~---~~~ 587 (786)
-+|.+..+. .+|+.. ....|+..++........+. ....+..|+|.+....|+.+ ...+.|+.+++.... ...
T Consensus 387 ~~C~~~~~~-p~Ll~a-n~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~ 463 (791)
T 3m0c_C 387 KACKAVGSI-AYLFFT-NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD 463 (791)
T ss_dssp CCCEETTSC-CEEEEE-CBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE
T ss_pred ceeeecccc-cccccc-cccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCccee
Confidence 344444332 244444 34568888887655444443 34567899999855555544 456789889887531 112
Q ss_pred eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECC--CeEEEEE
Q 044075 588 QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASE--NVVSIFD 662 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~d--g~I~iwD 662 (786)
..+.........|++.+.+..|+++-...+.|.+.++.......... .....|++.|.+++|+.+... +.|.+.+
T Consensus 464 ~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~ 543 (791)
T 3m0c_C 464 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 543 (791)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEe
Confidence 33333445678899998888898888888999999998655444433 357789999988888887643 6899999
Q ss_pred cCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccC--CCceEEEEEeCCCCEEEEEEC-
Q 044075 663 VETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSS--GNKFHSCIFHPSYPTLMVIGG- 737 (786)
Q Consensus 663 ~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~--~~~I~sv~fspdg~~L~sgs~- 737 (786)
+........+...-.....|++++.+..|+.+... .|..+++........+... -.....+++. +.+|+.+..
T Consensus 544 ~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~ 621 (791)
T 3m0c_C 544 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDII 621 (791)
T ss_dssp TTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETT
T ss_pred cCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECC
Confidence 87655444444444678999999877777666554 8999998755443333321 2234566664 336666654
Q ss_pred CCeEEEEECCCCe
Q 044075 738 YQSLELWNMAENK 750 (786)
Q Consensus 738 dg~I~IwDl~~~~ 750 (786)
.+.|...|..+++
T Consensus 622 ~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 622 NEAIFSANRLTGS 634 (791)
T ss_dssp TTEEEEEETTTCC
T ss_pred CCEEEEEeCCCCc
Confidence 4678888866654
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.03 E-value=0.00084 Score=75.87 Aligned_cols=239 Identities=11% Similarity=0.107 Sum_probs=144.5
Q ss_pred CeEEEEEcC-CCCEEEEEE-CCCeEEEEEcCCCeeeeecCCC---CCCeEEEEE-------ccCCCEEEEEeCCC-----
Q 044075 511 KVTCCHFSS-DGKLLASAG-HDKKVVVWNMENFQTECTPDDH---NHIITDVRF-------RPNSTQLATSSFDK----- 573 (786)
Q Consensus 511 ~V~~lafSp-dg~~Lasgs-~Dg~V~IWdl~t~~~~~~l~~h---~~~V~sl~f-------spdg~~Lasgs~Dg----- 573 (786)
....|+|+| ++..|+++. ..+.|++.|++++.....+..- ......|+| ++++..|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899998 344455444 4467899998887766554332 235899999 99999777776554
Q ss_pred --cEEEEcCCC-Cccee----eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC-------CCee----------
Q 044075 574 --TVRIWDAAK-PNFCL----QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS-------QYSC---------- 629 (786)
Q Consensus 574 --~I~VWdl~s-~~~~~----~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~-------~~~~---------- 629 (786)
.|.+++... +.... ..+... .....++++|++..|+++...++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665433 12110 122211 2356788999888888888888999999987 4433
Q ss_pred -e-Eee--c--CCeEEEEEeCCCCEEEEEEC-CCeEEEEEcC--CCcE--EEEEecC---C------------CCEE-EE
Q 044075 630 -A-RIS--K--GGTVQVRFQPRLGLLLAAAS-ENVVSIFDVE--TDRL--THSFKGH---S------------TEIH-SV 682 (786)
Q Consensus 630 -~-~~~--~--~~i~~i~~sp~g~~Ll~gs~-dg~I~iwD~~--t~~~--i~~l~~h---~------------~~I~-sv 682 (786)
. ... . .....++|+|+++.|+++.. ...|+.+|.. ++.. ...+.+. . .... .+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 1 111 1 33578999999997666654 5788886654 3322 0222211 0 1234 45
Q ss_pred EEc-------CCCCEEEEEeCC-eEEEEECCCCeeEEEEccCC------------------------CceEEEEEeCCCC
Q 044075 683 CWD-------TNGEYLASVSQD-SVRVWSLASGECIHELSSSG------------------------NKFHSCIFHPSYP 730 (786)
Q Consensus 683 ~~s-------pdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~------------------------~~I~sv~fspdg~ 730 (786)
+.. .++.++++-..+ .|+.++ .++. +.++.+.. .....++++++..
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 554 456666655555 899998 4553 44443220 2356788888633
Q ss_pred EEEEEE-CCCeEEEEECCCCeEE
Q 044075 731 TLMVIG-GYQSLELWNMAENKCM 752 (786)
Q Consensus 731 ~L~sgs-~dg~I~IwDl~~~~~~ 752 (786)
.|+++. ....|+.+++....+.
T Consensus 457 ~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp EEEEEETTTTEEEEEEECCCC--
T ss_pred EEEEEeCCCCEEEEEECCCCccc
Confidence 444444 4457888887765544
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.00 E-value=0.0014 Score=74.17 Aligned_cols=230 Identities=12% Similarity=0.061 Sum_probs=136.8
Q ss_pred CeEEEEEcc-CCCEEEEEeC-CCcEEEEcCCCCcceeeeecC---CCCCeEEEEE-------ecCCCeEEEEEcCCCc--
Q 044075 553 IITDVRFRP-NSTQLATSSF-DKTVRIWDAAKPNFCLQTYTG---HNNHVMSLDF-------HPKKNDLFCSCDGNSE-- 618 (786)
Q Consensus 553 ~V~sl~fsp-dg~~Lasgs~-Dg~I~VWdl~s~~~~~~~~~~---h~~~V~sl~~-------sp~g~~ll~sgs~Dg~-- 618 (786)
....|+|.| +...|+++.. .+.|++.|+.++.. ...... .......|+| ++++..++++...++.
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v-~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRML-SSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEE-EEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEE-EEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 467899998 3555555544 46788888887652 222221 1235899999 9999888877665532
Q ss_pred ----EEEEeCCC-Ce--------eeEeecCCeEEEEEeCCCCEEEEEE-CCCeEEEEEcC-------CCcE---------
Q 044075 619 ----IRFWNLSQ-YS--------CARISKGGTVQVRFQPRLGLLLAAA-SENVVSIFDVE-------TDRL--------- 668 (786)
Q Consensus 619 ----I~iwDl~~-~~--------~~~~~~~~i~~i~~sp~g~~Ll~gs-~dg~I~iwD~~-------t~~~--------- 668 (786)
|.+++... +. .+... .+...++++|++..|+++. .++.|+.+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 66675443 11 11112 3456788899666666555 56789999997 4543
Q ss_pred --EEE-Ee-cCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECC--CCee--EEEEccC---C------------CceE-E
Q 044075 669 --THS-FK-GHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLA--SGEC--IHELSSS---G------------NKFH-S 722 (786)
Q Consensus 669 --i~~-l~-~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~--s~~~--i~~l~~~---~------------~~I~-s 722 (786)
... +. ........|+|+|+|++|+.+... .|+.+|.. .+.. ...+.+. . .... .
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 112 21 233456899999999966655544 88886553 3321 0122111 0 1233 4
Q ss_pred EEEe-------CCCCEEEEEECCCeEEEEECCCCeEEEEccc------------------------CCCeEEEEEcCC-C
Q 044075 723 CIFH-------PSYPTLMVIGGYQSLELWNMAENKCMTIAAH------------------------DCVISALAQSPV-T 770 (786)
Q Consensus 723 v~fs-------pdg~~L~sgs~dg~I~IwDl~~~~~~~~~~h------------------------~~~V~slafspd-g 770 (786)
++.. +++.++++=.....|+.++ .++...++.+. -.....|+++++ +
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 4444 3455444444556899998 45666555432 123678999997 6
Q ss_pred CEEEEEeCCCcEEEe
Q 044075 771 GMVASASHDKSVKIW 785 (786)
Q Consensus 771 ~~LaSgs~DG~I~IW 785 (786)
.++++=.....|+.+
T Consensus 457 ~lyVaD~~N~rIrki 471 (496)
T 3kya_A 457 MFYVHDQVGHTIRTI 471 (496)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEEeCCCCEEEEE
Confidence 555555556677765
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.00 E-value=0.0063 Score=73.03 Aligned_cols=214 Identities=12% Similarity=0.041 Sum_probs=138.8
Q ss_pred EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC----eeeEeec---CCe
Q 044075 565 QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY----SCARISK---GGT 637 (786)
Q Consensus 565 ~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~----~~~~~~~---~~i 637 (786)
+|+.+. ...|+..++..... ..+......+..|+|++....|+++-...+.|+.+++... ....+.. ...
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~--~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEY--TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCC--EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred cccccc-ccceeEeeccCCcc--eeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 444433 45688888876553 2233345678899999988888888778889999998753 2222222 456
Q ss_pred EEEEEeCCCCEEEEEEC-CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeC---CeEEEEECCCCeeEEEE
Q 044075 638 VQVRFQPRLGLLLAAAS-ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQ---DSVRVWSLASGECIHEL 713 (786)
Q Consensus 638 ~~i~~sp~g~~Ll~gs~-dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~---D~I~vwDl~s~~~i~~l 713 (786)
..+++.+.++.|+++.. .+.|.++++........+.........|+++|.+.+|+.... ..|.+.++........+
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 78999988877777665 589999999866544444445556899999998666655543 27888888755444344
Q ss_pred ccCCCceEEEEEeCCCCEEEEEECC-CeEEEEECCCCeEEEEcc---cCCCeEEEEEcCCCCEEEEEe-CCCcEE
Q 044075 714 SSSGNKFHSCIFHPSYPTLMVIGGY-QSLELWNMAENKCMTIAA---HDCVISALAQSPVTGMVASAS-HDKSVK 783 (786)
Q Consensus 714 ~~~~~~I~sv~fspdg~~L~sgs~d-g~I~IwDl~~~~~~~~~~---h~~~V~slafspdg~~LaSgs-~DG~I~ 783 (786)
...-.....|++++....|+.+... ..|..+++.......+.. .-....+|++. +..|+.+. ..+.|.
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~ 626 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIF 626 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEE
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEE
Confidence 4344678899999888888877654 589999997765443332 12234566664 33444443 334444
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.91 E-value=0.002 Score=69.27 Aligned_cols=186 Identities=12% Similarity=0.229 Sum_probs=124.9
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecC----CC---eEEEEEcC--CCcEEEEeCC--CCeee
Q 044075 562 NSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPK----KN---DLFCSCDG--NSEIRFWNLS--QYSCA 630 (786)
Q Consensus 562 dg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~----g~---~ll~sgs~--Dg~I~iwDl~--~~~~~ 630 (786)
...+++....++-+.|||+ +++ .+..+.. +.+..+..-|. +. ..+++... +++|.+|++. +....
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~-~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGK-MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSC-EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCc-EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 3456776777889999999 555 3555543 56777777663 11 23445555 6899999773 33322
Q ss_pred Eee------c---CCeEEEEE--eCCCC--EEEEEECCCeEEEEEcC-------CCcEEEEEecCCCCEEEEEEcCCCCE
Q 044075 631 RIS------K---GGTVQVRF--QPRLG--LLLAAASENVVSIFDVE-------TDRLTHSFKGHSTEIHSVCWDTNGEY 690 (786)
Q Consensus 631 ~~~------~---~~i~~i~~--sp~g~--~Ll~gs~dg~I~iwD~~-------t~~~i~~l~~h~~~I~sv~~spdg~~ 690 (786)
... . ..+..+|+ ++... ++++...+|.+..|++. +.+.+++|. ..+.+..|..++....
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGR 193 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCe
Confidence 220 1 33445666 66443 68888889999999883 336677777 4567889999999999
Q ss_pred EEEEeCC-eEEEEECC-----CCeeEEEEc-cC-CCceEEEEE--eCCCC-EEEEEE-CCCeEEEEECC-CCeEE
Q 044075 691 LASVSQD-SVRVWSLA-----SGECIHELS-SS-GNKFHSCIF--HPSYP-TLMVIG-GYQSLELWNMA-ENKCM 752 (786)
Q Consensus 691 Lasgs~D-~I~vwDl~-----s~~~i~~l~-~~-~~~I~sv~f--spdg~-~L~sgs-~dg~I~IwDl~-~~~~~ 752 (786)
|+.+-++ .|..||.+ +++.+..+. .+ ...+..+++ .++++ +|++++ .++.+.+||.. +.+.+
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~v 268 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYV 268 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEE
Confidence 9999999 88888865 345665542 11 246788887 45555 777777 56799999997 55544
No 292
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.91 E-value=0.0016 Score=70.52 Aligned_cols=222 Identities=9% Similarity=0.069 Sum_probs=120.8
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCee--eeec---CCCCCCeEEEEEccC---CCEEEEEeC-C-----Cc
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQT--ECTP---DDHNHIITDVRFRPN---STQLATSSF-D-----KT 574 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~--~~~l---~~h~~~V~sl~fspd---g~~Lasgs~-D-----g~ 574 (786)
-.....++|.|+|+++++ ..+|.|++++ +++. +..+ .........|+|+|+ +..|+++.. + ..
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 345789999999985554 5679999998 3332 2212 122356889999998 555555443 2 56
Q ss_pred EEEEcCCCCc-----ceeeeec---CCCCCeEEEEEecCCCeEEEEEcC-------------CCcEEEEeCCCC------
Q 044075 575 VRIWDAAKPN-----FCLQTYT---GHNNHVMSLDFHPKKNDLFCSCDG-------------NSEIRFWNLSQY------ 627 (786)
Q Consensus 575 I~VWdl~s~~-----~~~~~~~---~h~~~V~sl~~sp~g~~ll~sgs~-------------Dg~I~iwDl~~~------ 627 (786)
|..|+..... ..+..+. ........|+|.|++. |+++.+. .|.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 8888776431 1111122 1112346899999985 4444321 256666665531
Q ss_pred ---------eeeEeecCCeEEEEEeCCCCEEEEEECC-Ce--------EEEEEcCC----------------CcEEEEEe
Q 044075 628 ---------SCARISKGGTVQVRFQPRLGLLLAAASE-NV--------VSIFDVET----------------DRLTHSFK 673 (786)
Q Consensus 628 ---------~~~~~~~~~i~~i~~sp~g~~Ll~gs~d-g~--------I~iwD~~t----------------~~~i~~l~ 673 (786)
+....-......++|+++...|+++... .. |.+..... ..++..+.
T Consensus 186 f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 186 FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 1111111224567899944445444432 22 33322111 01222222
Q ss_pred cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCee------EEEEccCCCceEEEEEeCCCCEEEEEE
Q 044075 674 GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGEC------IHELSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 674 ~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~------i~~l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
+......++| .+|.++++.-.. .|...++..... ...+......+..+++.|+|..+++..
T Consensus 266 -~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 266 -QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp -TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred -CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 2334567787 466666655555 777777654321 222223346788999999987655543
No 293
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.91 E-value=0.011 Score=69.31 Aligned_cols=218 Identities=11% Similarity=-0.037 Sum_probs=143.5
Q ss_pred EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEE
Q 044075 565 QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVR 641 (786)
Q Consensus 565 ~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~ 641 (786)
+|+.+ ....|+..+++............-..+..|+|++.+..++++-..++.|..+++.......... .....++
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlA 86 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMA 86 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEE
Confidence 45544 3567999999875532222222335688999999989898888888999999988654443333 3467889
Q ss_pred EeCCCCEEEEEEC-CCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEe-C-C-eEEEEECCCCeeEEEEccCC
Q 044075 642 FQPRLGLLLAAAS-ENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVS-Q-D-SVRVWSLASGECIHELSSSG 717 (786)
Q Consensus 642 ~sp~g~~Ll~gs~-dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs-~-D-~I~vwDl~s~~~i~~l~~~~ 717 (786)
+.+.++.|+.+.. .+.|.+.++........+...-.....|+++|...+|+... . . .|...++........+ ..-
T Consensus 87 vD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~~ 165 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PNV 165 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSC
T ss_pred EEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CCC
Confidence 9888777776665 57899999976543333333445678999998655555554 2 3 7888887654433223 344
Q ss_pred CceEEEEEeCCCCEEEEEECC-CeEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 718 NKFHSCIFHPSYPTLMVIGGY-QSLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 718 ~~I~sv~fspdg~~L~sgs~d-g~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
.....+++++++..|+.+... +.|..+|+.......+...-....+|++.. +.++++-...+.|...
T Consensus 166 ~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~ 233 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERA 233 (628)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred CCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC-CEEEEecCCCCEEEEE
Confidence 567899999988888877654 589999997654443334444566787764 3344443345555543
No 294
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.88 E-value=0.04 Score=65.67 Aligned_cols=260 Identities=11% Similarity=0.100 Sum_probs=155.0
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceee
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQ 588 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~ 588 (786)
...|.++....+| .|..|+.+| +.+||..+.+...........|.++.. .++ .|..++.+ -|..||..+.. ..
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~--~~ 134 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRK--LT 134 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCC--EE
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCe--EE
Confidence 3568998887766 566666655 789998876543321222345777754 344 56667766 58888887654 22
Q ss_pred eec-----CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec--------CCeEEEEEeCCCCEEEEEECC
Q 044075 589 TYT-----GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK--------GGTVQVRFQPRLGLLLAAASE 655 (786)
Q Consensus 589 ~~~-----~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~--------~~i~~i~~sp~g~~Ll~gs~d 655 (786)
.+. .....|.++....++...+ +.. +-|..++..+........ ..+.++....++..|.+++.
T Consensus 135 ~~~~~~~~l~~~~i~~i~~d~~g~lWi--gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~- 210 (758)
T 3ott_A 135 SFDTRRNGLPNNTIYSIIRTKDNQIYV--GTY-NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE- 210 (758)
T ss_dssp EECHHHHCCSCSCEEEEEECTTCCEEE--EET-TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-
T ss_pred EeccCCCCcCCCeEEEEEEcCCCCEEE--EeC-CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-
Confidence 221 1234688888776666444 333 457888887665433211 12667777777777777774
Q ss_pred CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEc-------cCCCceEEEEEeCC
Q 044075 656 NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELS-------SSGNKFHSCIFHPS 728 (786)
Q Consensus 656 g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~-------~~~~~I~sv~fspd 728 (786)
+-|..+|..+++...........|.+++...+|.+.+.. .+.+.+++..+++...... .....|.++....+
T Consensus 211 ~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~ 289 (758)
T 3ott_A 211 GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT-DNGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQE 289 (758)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE-TTEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTT
T ss_pred CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe-CCceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCC
Confidence 568889988765432211123458888888888776654 5588899987765432211 12345888888877
Q ss_pred CCEEEEEECCCeEEEEECCCC-eEEEEc-----ccCCCeEEEEEcCCCCEEEEEeCCCcEE
Q 044075 729 YPTLMVIGGYQSLELWNMAEN-KCMTIA-----AHDCVISALAQSPVTGMVASASHDKSVK 783 (786)
Q Consensus 729 g~~L~sgs~dg~I~IwDl~~~-~~~~~~-----~h~~~V~slafspdg~~LaSgs~DG~I~ 783 (786)
+. |.+|+..| +.++..... ...... .....|.++....+|.+.+ |+.+|.++
T Consensus 290 g~-lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~Gl~~ 347 (758)
T 3ott_A 290 HN-IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANGLIR 347 (758)
T ss_dssp CC-EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTEEEE
T ss_pred CC-EEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCccee
Confidence 76 55666666 555433221 111111 1234688888887776554 44555443
No 295
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.87 E-value=0.024 Score=66.26 Aligned_cols=222 Identities=8% Similarity=-0.016 Sum_probs=149.3
Q ss_pred EEEEEECCCeEEEEEcCCCeeeeecC-CCCCCeEEEEEccCCCEEEEE-eCCCcEEEEcCCCCcceeeeecCCCCCeEEE
Q 044075 523 LLASAGHDKKVVVWNMENFQTECTPD-DHNHIITDVRFRPNSTQLATS-SFDKTVRIWDAAKPNFCLQTYTGHNNHVMSL 600 (786)
Q Consensus 523 ~Lasgs~Dg~V~IWdl~t~~~~~~l~-~h~~~V~sl~fspdg~~Lasg-s~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl 600 (786)
+|+.+ ....|+..++++......+. ..-..+..|+|++.+..|+.+ ..++.|..++++.... ...+.........|
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHVVEFGLDYPEGM 85 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEEEeCCCCCcceE
Confidence 45444 46789999998655433332 223467899999966666554 4578899998875432 22333223457889
Q ss_pred EEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee---cCCeEEEEEeCCCCEEEEEEC--CCeEEEEEcCCCcEEEEEecC
Q 044075 601 DFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS---KGGTVQVRFQPRLGLLLAAAS--ENVVSIFDVETDRLTHSFKGH 675 (786)
Q Consensus 601 ~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~---~~~i~~i~~sp~g~~Ll~gs~--dg~I~iwD~~t~~~i~~l~~h 675 (786)
++.+.+..|+++-...+.|.+.++......... -.....+++.|....|+.+.. .+.|...++........+. .
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~-~ 164 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP-N 164 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-S
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC-C
Confidence 999888888888778899999999765433222 145678999998888887764 4688888887654333333 4
Q ss_pred CCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEEC-CCeEEEEECCCCe
Q 044075 676 STEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGG-YQSLELWNMAENK 750 (786)
Q Consensus 676 ~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl~~~~ 750 (786)
-.....|++++++..|+.+... .|..+|+..... ..+.........+++.. ..|+.+.. .+.|...|..+++
T Consensus 165 ~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 165 VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEETTTTEEEEEETTTCC
T ss_pred CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecCCCCEEEEEECCCCC
Confidence 5678899999987777776654 899999876433 23333334456777765 35665554 5788888876654
No 296
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.85 E-value=0.032 Score=66.46 Aligned_cols=258 Identities=11% Similarity=0.076 Sum_probs=154.6
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec-CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCccee
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP-DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCL 587 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l-~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~ 587 (786)
...|.||.-..+|. |..|+.+| +..||-.+.+..... ......|.++....++ .|.+|+.+| +..||..+....
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~- 95 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYE- 95 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEEC-
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEE-
Confidence 56799999988875 55666777 566774332221111 1223568888877665 567777665 789998775421
Q ss_pred eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEee-------cCCeEEEEEeCCCCEEEEEECCCeEEE
Q 044075 588 QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARIS-------KGGTVQVRFQPRLGLLLAAASENVVSI 660 (786)
Q Consensus 588 ~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~-------~~~i~~i~~sp~g~~Ll~gs~dg~I~i 660 (786)
.........|.++... + ..+.+. +.+ .|..||..+.+..... ...+.++....++... +++. +-|..
T Consensus 96 ~~~~~~~~~i~~i~~~-~-g~lWig-t~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~-~Gl~~ 169 (758)
T 3ott_A 96 QPETDFPTDVRTMALQ-G-DTLWLG-ALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIY-VGTY-NGLCR 169 (758)
T ss_dssp CCSCCCCSCEEEEEEE-T-TEEEEE-ETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEE-EEET-TEEEE
T ss_pred CcccCCCceEEEEEec-C-CcEEEE-cCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEE-EEeC-CCHhh
Confidence 1111123457776543 4 445533 334 6888998766544331 1345666666666544 4555 45888
Q ss_pred EEcCCCcEEEEEec-C----CCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEE
Q 044075 661 FDVETDRLTHSFKG-H----STEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVI 735 (786)
Q Consensus 661 wD~~t~~~i~~l~~-h----~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sg 735 (786)
||..+++....... . ...|.++..+.++..|..++.+.|..+|..+++...........|.++....++.. .+|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l-Wig 248 (758)
T 3ott_A 170 YIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDL-LAG 248 (758)
T ss_dssp EETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCE-EEE
T ss_pred CccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCE-EEE
Confidence 89877654322111 1 22488898888777655566457889998876543221122345788888877764 445
Q ss_pred ECCCeEEEEECCCCeEEEEcc--------cCCCeEEEEEcCCCCEEEEEeCCC
Q 044075 736 GGYQSLELWNMAENKCMTIAA--------HDCVISALAQSPVTGMVASASHDK 780 (786)
Q Consensus 736 s~dg~I~IwDl~~~~~~~~~~--------h~~~V~slafspdg~~LaSgs~DG 780 (786)
+. +.|.+++..++....+.. ....|.++....+|.+-+ |+..|
T Consensus 249 T~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G 299 (758)
T 3ott_A 249 TD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG 299 (758)
T ss_dssp ET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS
T ss_pred eC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc
Confidence 54 568889987765543321 234588998888776444 44555
No 297
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.85 E-value=0.0042 Score=72.60 Aligned_cols=220 Identities=9% Similarity=-0.033 Sum_probs=136.8
Q ss_pred CCCeEEEEEcCCCe-eeeecCCCCCCeEEEEEccCCCEEEEEeC-CCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCC
Q 044075 529 HDKKVVVWNMENFQ-TECTPDDHNHIITDVRFRPNSTQLATSSF-DKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKK 606 (786)
Q Consensus 529 ~Dg~V~IWdl~t~~-~~~~l~~h~~~V~sl~fspdg~~Lasgs~-Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g 606 (786)
....|++.+++... ....+...-..+..|+|++.+..|+.+.. .+.|..++++........+...-.....+++.+.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 45678888887543 22222233445789999997766666554 67888888876432122333333568899999988
Q ss_pred CeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEEC--CCeEEEEEcCCCcEEEEEecCCCCEEE
Q 044075 607 NDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAAS--ENVVSIFDVETDRLTHSFKGHSTEIHS 681 (786)
Q Consensus 607 ~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~--dg~I~iwD~~t~~~i~~l~~h~~~I~s 681 (786)
..++++-...+.|.+.++.......... .....+++.|.++.|+.+.. .+.|...++............-.....
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~G 175 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG 175 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEE
T ss_pred CEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcE
Confidence 8888888888999999998654433332 45678999998888877764 367888887754433333334557899
Q ss_pred EEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEE-CCCeEEEEECCCCe
Q 044075 682 VCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIG-GYQSLELWNMAENK 750 (786)
Q Consensus 682 v~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs-~dg~I~IwDl~~~~ 750 (786)
|++++++..|+.+... .|..+|+........+.........+++..+ .|+.+. ..+.|...|..+++
T Consensus 176 lald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 176 LTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp EEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEESSSCC
T ss_pred EEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCc
Confidence 9999987777666554 8999998754332222211222345666554 555554 45688888887664
No 298
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.82 E-value=0.019 Score=71.86 Aligned_cols=271 Identities=9% Similarity=0.092 Sum_probs=154.0
Q ss_pred CCCeEEEEEcCC------CCEEEEEEC-CCeEEEEEcCCCeeeeecCCC-CCCeEEEEEcc--CCCEEEEEeCCCcEEEE
Q 044075 509 SSKVTCCHFSSD------GKLLASAGH-DKKVVVWNMENFQTECTPDDH-NHIITDVRFRP--NSTQLATSSFDKTVRIW 578 (786)
Q Consensus 509 ~~~V~~lafSpd------g~~Lasgs~-Dg~V~IWdl~t~~~~~~l~~h-~~~V~sl~fsp--dg~~Lasgs~Dg~I~VW 578 (786)
.+.|.|+++.+. ++++|+|.. |++|+|+++++.+.+....-. .....++.+.. ...+|.+|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 568999999863 469999996 999999999987766543221 12344444432 34578899999998666
Q ss_pred cCC--CCccee--eeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec-CCeE-EEEEeCC--CCEEE
Q 044075 579 DAA--KPNFCL--QTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK-GGTV-QVRFQPR--LGLLL 650 (786)
Q Consensus 579 dl~--s~~~~~--~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~-~~i~-~i~~sp~--g~~Ll 650 (786)
.++ ++...- ..+.+ ..++.-..+...+..-+++++ +....+|.-+..-...... ..+. ...|+.. .+-++
T Consensus 633 ~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~~~l~~s~l~~~~v~~~~~F~se~~~~g~v 710 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLA 710 (1158)
T ss_dssp EECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESSSSEEEEEBSSSCCCEEEEECCSSSTTEEE
T ss_pred EEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcCCceEEeccChHHhceEeccCcccCCCcEE
Confidence 544 333111 12233 335544444444444444454 3344444333221112122 2232 3345432 23444
Q ss_pred EEECCCeEEEEEcCCCc--EEEEEecCCCCEEEEEEcCCCCEEEEEeC--------------------------------
Q 044075 651 AAASENVVSIFDVETDR--LTHSFKGHSTEIHSVCWDTNGEYLASVSQ-------------------------------- 696 (786)
Q Consensus 651 ~gs~dg~I~iwD~~t~~--~i~~l~~h~~~I~sv~~spdg~~Lasgs~-------------------------------- 696 (786)
. ..++.++|..+.... .++++. -...+..++++|+.+.++.+..
T Consensus 711 ~-~~~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1158)
T 3ei3_A 711 L-ANNSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKL 788 (1158)
T ss_dssp E-ECSSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCC
T ss_pred E-EcCCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccccc
Confidence 3 345668888775432 233333 4456778888887665443321
Q ss_pred ----------------C--eEEEEECCCCeeEEEEccCCC-ceEEEE---EeCC-CCEEEEEE----------CCCeEEE
Q 044075 697 ----------------D--SVRVWSLASGECIHELSSSGN-KFHSCI---FHPS-YPTLMVIG----------GYQSLEL 743 (786)
Q Consensus 697 ----------------D--~I~vwDl~s~~~i~~l~~~~~-~I~sv~---fspd-g~~L~sgs----------~dg~I~I 743 (786)
. .|+++|..+.+.+..+.-..+ .+.+++ |..+ ..+|++|+ ..|.|++
T Consensus 789 ~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~v 868 (1158)
T 3ei3_A 789 FSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVV 868 (1158)
T ss_dssp C----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEE
T ss_pred ccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEE
Confidence 1 367778777777766654433 344444 3322 46888887 2468999
Q ss_pred EECCCCeEE--EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 744 WNMAENKCM--TIAAHDCVISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 744 wDl~~~~~~--~~~~h~~~V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
|++.+++.. ......+.|++|+-- .| +|++|- ...|+||+
T Consensus 869 f~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~i-g~~l~vy~ 910 (1158)
T 3ei3_A 869 FQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASI-NSTVRLYE 910 (1158)
T ss_dssp EEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEE-TTEEEEEE
T ss_pred EEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEc-CCEEEEEE
Confidence 999766544 333457889998844 35 444433 46788885
No 299
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.78 E-value=0.035 Score=58.75 Aligned_cols=242 Identities=12% Similarity=0.231 Sum_probs=147.4
Q ss_pred CCeEEEEEcCCCeeee-ecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCe
Q 044075 530 DKKVVVWNMENFQTEC-TPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKND 608 (786)
Q Consensus 530 Dg~V~IWdl~t~~~~~-~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ 608 (786)
+..|.|.|+.+...+. ....-+ +.-.+|..+.||.-. ..++.|+|+++... +..+.- ...|.-=.|..+...
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~Ad----sAIMnP~~~ViALra-g~~LQiFnletK~k-lks~~~-~e~VvfWkWis~~~L 120 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISAD----SAIMNPASKVIALKA-GKTLQIFNIEMKSK-MKAHTM-TDDVTFWKWISLNTV 120 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCCS----EEEECSSSSEEEEEE-TTEEEEEETTTTEE-EEEEEC-SSCEEEEEECSSSEE
T ss_pred CCEEEEEECCCCCCccccccccc----eeeeCCCccEEEEec-CCeEEEechHHhhh-hcceec-CCccEEEEecCCCeE
Confidence 3479999998755432 222222 334588888777766 68899999998764 444332 356766667644332
Q ss_pred EEEEEcCCCcEEEEeCCC-CeeeEeec-------CCeEEEEEeCCCCEEEEEEC-------CCeEEEEEcCCCcEEEEEe
Q 044075 609 LFCSCDGNSEIRFWNLSQ-YSCARISK-------GGTVQVRFQPRLGLLLAAAS-------ENVVSIFDVETDRLTHSFK 673 (786)
Q Consensus 609 ll~sgs~Dg~I~iwDl~~-~~~~~~~~-------~~i~~i~~sp~g~~Ll~gs~-------dg~I~iwD~~t~~~i~~l~ 673 (786)
-+++ +..|+.|++.. ....+.+. ..+.....+++.++++..+- .|.+.+|..+.+ ....++
T Consensus 121 ~lVT---~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ie 196 (365)
T 2xzh_A 121 ALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE 196 (365)
T ss_dssp EEEE---SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEEC
T ss_pred EEEc---CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceee
Confidence 2323 56899999975 23444433 34566677888888776653 367889998754 455667
Q ss_pred cCCCCEEEEEEcCC---CCEEEEEeC---C-eEEEEECCCC---------eeEEEEccC---CCceEEEEEeCCCCEEEE
Q 044075 674 GHSTEIHSVCWDTN---GEYLASVSQ---D-SVRVWSLASG---------ECIHELSSS---GNKFHSCIFHPSYPTLMV 734 (786)
Q Consensus 674 ~h~~~I~sv~~spd---g~~Lasgs~---D-~I~vwDl~s~---------~~i~~l~~~---~~~I~sv~fspdg~~L~s 734 (786)
+|......+.+..+ ..+|+.+.. + +++|.++... +.+..+... .+-..++..++....++.
T Consensus 197 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyv 276 (365)
T 2xzh_A 197 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 276 (365)
T ss_dssp CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEE
Confidence 77654443333211 123444433 2 7888888432 122222222 334567888999999999
Q ss_pred EECCCeEEEEECCCCeEEEEc-ccCCCeEEEEEcCCCCEEEEEeCCCcE
Q 044075 735 IGGYQSLELWNMAENKCMTIA-AHDCVISALAQSPVTGMVASASHDKSV 782 (786)
Q Consensus 735 gs~dg~I~IwDl~~~~~~~~~-~h~~~V~slafspdg~~LaSgs~DG~I 782 (786)
.+..|.|++||+.++.++... -..+.|...+-+....=++.....|.|
T Consensus 277 iTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 277 ITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 325 (365)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEE
T ss_pred EeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEE
Confidence 999999999999999988443 233444444433333333344455544
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.76 E-value=8.7e-05 Score=88.21 Aligned_cols=224 Identities=6% Similarity=-0.035 Sum_probs=136.4
Q ss_pred CCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe-CCCcEEEEcCCCC---cceeeeecCCCCCeEEEEEec
Q 044075 529 HDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS-FDKTVRIWDAAKP---NFCLQTYTGHNNHVMSLDFHP 604 (786)
Q Consensus 529 ~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs-~Dg~I~VWdl~s~---~~~~~~~~~h~~~V~sl~~sp 604 (786)
..+.|++.++.+.+....+... ..+..|+|.+.+..|+.+. ..+.|+.+++... ......+.........|++.+
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~-~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNL-RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCC-TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred CccceEEEeCCCCcceeeeccC-cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 3467888888876655444333 3567899998776666654 4578999998751 111222222223456788887
Q ss_pred CCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEECC--CeEEEEEcCCCcEEEEEecCCCCE
Q 044075 605 KKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAASE--NVVSIFDVETDRLTHSFKGHSTEI 679 (786)
Q Consensus 605 ~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~d--g~I~iwD~~t~~~i~~l~~h~~~I 679 (786)
.+..|+++-...+.|.++++.......... .....+++.|.+++|+++... +.|.++++........+...-...
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~P 542 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 542 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSC
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCc
Confidence 777777676677899999988665444433 345678899877777666542 678888876432222222223456
Q ss_pred EEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEcc--CCCceEEEEEeCCCCEEEEEE-CCCeEEEEECCCCeEEEE
Q 044075 680 HSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSS--SGNKFHSCIFHPSYPTLMVIG-GYQSLELWNMAENKCMTI 754 (786)
Q Consensus 680 ~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~--~~~~I~sv~fspdg~~L~sgs-~dg~I~IwDl~~~~~~~~ 754 (786)
+.|+|++++..|+.+... .|.++|+........+.. .......+++..+ .|+.+. ..+.|..+|..+++.+..
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~~~~~ 620 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDVNL 620 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEEEEEC
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCCceEE
Confidence 789999976655555444 899999875433222221 1123345556544 444444 456899999888776643
Q ss_pred c
Q 044075 755 A 755 (786)
Q Consensus 755 ~ 755 (786)
.
T Consensus 621 i 621 (699)
T 1n7d_A 621 L 621 (699)
T ss_dssp C
T ss_pred e
Confidence 3
No 301
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.74 E-value=0.068 Score=56.61 Aligned_cols=232 Identities=13% Similarity=0.163 Sum_probs=155.9
Q ss_pred EEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCC
Q 044075 515 CHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHN 594 (786)
Q Consensus 515 lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~ 594 (786)
.-.+|..+.||.=. ...+.|+|+++...++.+.-. ..|.-=+|-.+. .|+..+ +..|+-|+++....+.+.+..|.
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~ 147 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHS 147 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCG
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecch
Confidence 34577777777655 678999999999888887654 467777777544 455444 46799999987666677666553
Q ss_pred ----CCeEEEEEecCCCeEEEEEc------CCCcEEEEeCCCCeeeEeecCCeEEE-EEeCCCC----EEEEEEC----C
Q 044075 595 ----NHVMSLDFHPKKNDLFCSCD------GNSEIRFWNLSQYSCARISKGGTVQV-RFQPRLG----LLLAAAS----E 655 (786)
Q Consensus 595 ----~~V~sl~~sp~g~~ll~sgs------~Dg~I~iwDl~~~~~~~~~~~~i~~i-~~sp~g~----~Ll~gs~----d 655 (786)
..|.....+++.+.++++|- -.|.+.+|..+... ...++++..++ .+..+|. .|++-.. .
T Consensus 148 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 226 (365)
T 2xzh_A 148 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 226 (365)
T ss_dssp GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTE
T ss_pred hcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 45777777888888877663 23778899888654 33444554443 2333332 2333222 2
Q ss_pred CeEEEEEcCCC--------c-EEEEEec---CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEE
Q 044075 656 NVVSIFDVETD--------R-LTHSFKG---HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHS 722 (786)
Q Consensus 656 g~I~iwD~~t~--------~-~i~~l~~---h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~s 722 (786)
+.++|.++... + .+..+.. -.+-..++..++....++..+.- .|.+||+.++.++..-+.....|..
T Consensus 227 ~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ 306 (365)
T 2xzh_A 227 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV 306 (365)
T ss_dssp EEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred cEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEE
Confidence 68999998542 1 1111111 23445577777777777777766 9999999999999998888888877
Q ss_pred EEEeCCCCEEEEEECCCeEEEEECCCCeE
Q 044075 723 CIFHPSYPTLMVIGGYQSLELWNMAENKC 751 (786)
Q Consensus 723 v~fspdg~~L~sgs~dg~I~IwDl~~~~~ 751 (786)
.+.+....-+++....|.|.--.+++...
T Consensus 307 ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 307 TAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp EEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred ecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 77766666677777888777666665543
No 302
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.74 E-value=0.0027 Score=66.36 Aligned_cols=226 Identities=9% Similarity=0.068 Sum_probs=117.9
Q ss_pred CCCEEEEEE-CC-----CeEEEEEcCCCeeeee--cCCCCCCeEEEEEccCCCEEEEEeCC-----CcEEEEcCCCCc--
Q 044075 520 DGKLLASAG-HD-----KKVVVWNMENFQTECT--PDDHNHIITDVRFRPNSTQLATSSFD-----KTVRIWDAAKPN-- 584 (786)
Q Consensus 520 dg~~Lasgs-~D-----g~V~IWdl~t~~~~~~--l~~h~~~V~sl~fspdg~~Lasgs~D-----g~I~VWdl~s~~-- 584 (786)
++.+++.|+ .+ ..+.+||..+.+-... +.........+. .++.+++.|+.+ ..+.+||+.+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 345666666 32 3688999887653322 211111222222 256777777755 468999998766
Q ss_pred -ceee-eecCCCCCeEEEEEecCCCeEEEEEcCC-----CcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEEC
Q 044075 585 -FCLQ-TYTGHNNHVMSLDFHPKKNDLFCSCDGN-----SEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 585 -~~~~-~~~~h~~~V~sl~~sp~g~~ll~sgs~D-----g~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~ 654 (786)
.... .+....... +++.. ++.+++.|+.+ ..+.+||+.+.+-..... ......+...++..++.|+.
T Consensus 92 ~W~~~~~~p~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 168 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLA-GATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGY 168 (301)
T ss_dssp CCEEECCCSSCCBSC-EEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCB
T ss_pred eeEECCCCCCCccce-eEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCC
Confidence 3222 111111222 22222 35566666643 368899988765443322 11111112225566666665
Q ss_pred C-----CeEEEEEcCCCcEEEE--EecCCCCEEEEEEcCCCCEEEEEeC------CeEEEEECCCCeeEEE--EccCCCc
Q 044075 655 E-----NVVSIFDVETDRLTHS--FKGHSTEIHSVCWDTNGEYLASVSQ------DSVRVWSLASGECIHE--LSSSGNK 719 (786)
Q Consensus 655 d-----g~I~iwD~~t~~~i~~--l~~h~~~I~sv~~spdg~~Lasgs~------D~I~vwDl~s~~~i~~--l~~~~~~ 719 (786)
+ ..+.+||+.+.+-... +.........+. .++++++.|+. +.|.+||+.+.+-... +......
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY 246 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc
Confidence 4 4689999988744332 111111122222 25666666654 2589999988753322 1111111
Q ss_pred eEEEEEeCCCCEEEEEECC-----CeEEEEECCCCeEEEE
Q 044075 720 FHSCIFHPSYPTLMVIGGY-----QSLELWNMAENKCMTI 754 (786)
Q Consensus 720 I~sv~fspdg~~L~sgs~d-----g~I~IwDl~~~~~~~~ 754 (786)
...+.+ ++..++.|+.+ ..|.+||+.+.+...+
T Consensus 247 ~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 247 VGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp CEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred eeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence 222222 56666666654 3688999988776543
No 303
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.73 E-value=0.015 Score=62.87 Aligned_cols=225 Identities=8% Similarity=0.004 Sum_probs=125.3
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe-eeeec---CCCCCCeEEEEEccC---CCEEEEEeC----C----C
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ-TECTP---DDHNHIITDVRFRPN---STQLATSSF----D----K 573 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~-~~~~l---~~h~~~V~sl~fspd---g~~Lasgs~----D----g 573 (786)
-.....++|.|+|++++ +..+|.|++++ .+++ .+..+ .........|+|+|+ +..|+++.. + .
T Consensus 28 l~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 34678999999998554 55679999997 3444 22222 122356889999997 555555443 2 5
Q ss_pred cEEEEcCCCCc------c-eeeeecC-CCCCeEEEEEecCCCeEEEEEcC------------CCcEEEEeCCCC------
Q 044075 574 TVRIWDAAKPN------F-CLQTYTG-HNNHVMSLDFHPKKNDLFCSCDG------------NSEIRFWNLSQY------ 627 (786)
Q Consensus 574 ~I~VWdl~s~~------~-~~~~~~~-h~~~V~sl~~sp~g~~ll~sgs~------------Dg~I~iwDl~~~------ 627 (786)
.|..|+..... . ++..+.. .......|.|.|++..++..++. .|.|..++....
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 67777766431 1 1111221 11234679999998644433321 245666665432
Q ss_pred ----eeeEeecCCeEEEEEeCCCCEEEEEECCC----eEEEEEcCC----------------CcEEEEEecCCCCEEEEE
Q 044075 628 ----SCARISKGGTVQVRFQPRLGLLLAAASEN----VVSIFDVET----------------DRLTHSFKGHSTEIHSVC 683 (786)
Q Consensus 628 ----~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg----~I~iwD~~t----------------~~~i~~l~~h~~~I~sv~ 683 (786)
+....-......++|+++...|+++.... .|.+...-. ..++..+.........++
T Consensus 186 f~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~ 265 (354)
T 3a9g_A 186 FPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGAS 265 (354)
T ss_dssp STTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEE
T ss_pred CCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceE
Confidence 11111113356789999544455554432 244332110 012223311234577888
Q ss_pred Ec-------CCCCEEEEEeCC-eEEEEECCCC-eeE--EEEc-cCCCceEEEEEeCCCCEEEEE
Q 044075 684 WD-------TNGEYLASVSQD-SVRVWSLASG-ECI--HELS-SSGNKFHSCIFHPSYPTLMVI 735 (786)
Q Consensus 684 ~s-------pdg~~Lasgs~D-~I~vwDl~s~-~~i--~~l~-~~~~~I~sv~fspdg~~L~sg 735 (786)
|. .+|.++++.-.. .|..+++... +.. ..+. .....+..+++.|+|..+++.
T Consensus 266 ~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 266 FVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp ECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred EECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 83 567666665555 8888888753 322 2332 224578899999999755554
No 304
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.69 E-value=0.0072 Score=65.36 Aligned_cols=219 Identities=12% Similarity=0.096 Sum_probs=121.5
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc-eeeee---cCCCCCeEEEEEecC---CCeEEEEEcCC-----CcE
Q 044075 552 HIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF-CLQTY---TGHNNHVMSLDFHPK---KNDLFCSCDGN-----SEI 619 (786)
Q Consensus 552 ~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~-~~~~~---~~h~~~V~sl~~sp~---g~~ll~sgs~D-----g~I 619 (786)
.....++|.|++++ +++..+|.|++++ ++.. .+..+ .........|+|+|+ +..++++.... +.|
T Consensus 31 ~~P~~ia~~pdG~l-~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGM-LIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCE-EEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeE-EEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34679999999985 4556679999998 3321 11111 122356899999998 66666555433 678
Q ss_pred EEEeCCCCe-----e-eEeec------CCeEEEEEeCCCCEEEEEEC-------------CCeEEEEEcCC---------
Q 044075 620 RFWNLSQYS-----C-ARISK------GGTVQVRFQPRLGLLLAAAS-------------ENVVSIFDVET--------- 665 (786)
Q Consensus 620 ~iwDl~~~~-----~-~~~~~------~~i~~i~~sp~g~~Ll~gs~-------------dg~I~iwD~~t--------- 665 (786)
..|+..... . +.... .....++|.|+|..+++.+. .+.|..++...
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 888876431 1 11121 12357899999965555432 14666666553
Q ss_pred -----CcEEEEEecCCCCEEEEEEcC-CCCEEEEEeCC-eE------EEEECCCCe------------------eEEEEc
Q 044075 666 -----DRLTHSFKGHSTEIHSVCWDT-NGEYLASVSQD-SV------RVWSLASGE------------------CIHELS 714 (786)
Q Consensus 666 -----~~~i~~l~~h~~~I~sv~~sp-dg~~Lasgs~D-~I------~vwDl~s~~------------------~i~~l~ 714 (786)
...+.. .++ .....++|+| ++.++++-... .+ .|.-+..+. ++..+
T Consensus 188 ~~~~~~~~i~a-~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~- 264 (352)
T 2ism_A 188 GRRGARPEVYS-LGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW- 264 (352)
T ss_dssp TCTTSCTTEEE-ECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-
T ss_pred CCCCCCccEEE-EcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-
Confidence 111111 122 2356789999 67766654433 32 122222221 12222
Q ss_pred cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe-------EEEEcccCCCeEEEEEcCCCCEEEEEe
Q 044075 715 SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK-------CMTIAAHDCVISALAQSPVTGMVASAS 777 (786)
Q Consensus 715 ~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~-------~~~~~~h~~~V~slafspdg~~LaSgs 777 (786)
.+......++| .++..+++....+.|...++.... ...+......+.++++.|||.++++..
T Consensus 265 ~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 12233456777 355544444344577777765432 122223346799999999998777654
No 305
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.68 E-value=0.015 Score=62.08 Aligned_cols=228 Identities=9% Similarity=0.042 Sum_probs=128.8
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCe---eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQ---TECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF 585 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~---~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~ 585 (786)
...+.+|.|++ +..++ ++.++.|.. ..+.++ .+.....+...+..|.+.+++..++++ .++.|..- .+.++.
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~t 153 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKN 153 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSS
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCC
Confidence 44688999986 44444 455675544 333333 222222234567888887777655554 46654321 122222
Q ss_pred eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEE-EEeC--CCCeeeEe-ecCCeEEEEEeCCCCEEEEEECCCeEEEE
Q 044075 586 CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIR-FWNL--SQYSCARI-SKGGTVQVRFQPRLGLLLAAASENVVSIF 661 (786)
Q Consensus 586 ~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~-iwDl--~~~~~~~~-~~~~i~~i~~sp~g~~Ll~gs~dg~I~iw 661 (786)
-......+...+..+.+.+++. +++.+. +|.|. -+|- .+.+.+.. ....+..+.+.+++.. ++++.+|.+++.
T Consensus 154 W~~~~~~~~~~~~~~~~~~~~~-~~~~g~-~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~-~~~~~~G~~~~s 230 (327)
T 2xbg_A 154 WQALVQEAIGVMRNLNRSPSGE-YVAVSS-RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRL-WMIVNGGKIAFS 230 (327)
T ss_dssp EEEEECSCCCCEEEEEECTTSC-EEEEET-TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCE-EEEETTTEEEEE
T ss_pred CEEeecCCCcceEEEEEcCCCc-EEEEEC-CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCE-EEEeCCceEEEe
Confidence 2233344556789999998765 444554 44444 3443 23333321 2245677888888764 456667887776
Q ss_pred EcCCCcEEEEEe-c---CCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEcc---CCCceEEEEEeCCCCEEEE
Q 044075 662 DVETDRLTHSFK-G---HSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSS---SGNKFHSCIFHPSYPTLMV 734 (786)
Q Consensus 662 D~~t~~~i~~l~-~---h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~---~~~~I~sv~fspdg~~L~s 734 (786)
+...++.-..+. . +...+.++.+.+++.+++++..+.| ++....++.-..+.. ....+.++.|.+++ .+++
T Consensus 231 ~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~ 308 (327)
T 2xbg_A 231 DPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFI 308 (327)
T ss_dssp ETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEE
T ss_pred cCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEE
Confidence 433233222222 1 2245889999988888887765566 444554543333332 23567888887544 5777
Q ss_pred EECCCeEEEEEC
Q 044075 735 IGGYQSLELWNM 746 (786)
Q Consensus 735 gs~dg~I~IwDl 746 (786)
++.+|.|.-++-
T Consensus 309 ~G~~G~i~~~~~ 320 (327)
T 2xbg_A 309 LGQKGILLRYVT 320 (327)
T ss_dssp ECSTTEEEEECC
T ss_pred EcCCceEEEEcC
Confidence 888888776653
No 306
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.66 E-value=0.087 Score=57.84 Aligned_cols=242 Identities=12% Similarity=0.227 Sum_probs=148.7
Q ss_pred CCeEEEEEcCCCeeeee-cCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCe
Q 044075 530 DKKVVVWNMENFQTECT-PDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKND 608 (786)
Q Consensus 530 Dg~V~IWdl~t~~~~~~-l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ 608 (786)
+..|.|.|+.+...+.+ ...-+ +.-.+|..+.||.=. ..++.|||+++... +..+.- ...|.-=.|..+..
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~Ad----sAIMnP~~~iiALra-g~~lQiFnle~K~k-lks~~~-~e~VvfWkWis~~~- 118 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISAD----SAIMNPASKVIALKA-GKTLQIFNIEMKSK-MKAHTM-TDDVTFWKWISLNT- 118 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCCS----EEEECSSSSCEEEEE-TTEEEEEETTTTEE-EEEEEC-SSCCCEEEEEETTE-
T ss_pred CCeEEEEECCCCCcceecccccc----eeeeCCCCcEEEEec-CCeEEEEchHHhhh-hcceec-CCCceEEEecCCCe-
Confidence 44799999987554422 22222 345678887777665 68999999998764 444443 23565556654433
Q ss_pred EEEEEcCCCcEEEEeCCCC-eeeEeec-------CCeEEEEEeCCCCEEEEEEC-------CCeEEEEEcCCCcEEEEEe
Q 044075 609 LFCSCDGNSEIRFWNLSQY-SCARISK-------GGTVQVRFQPRLGLLLAAAS-------ENVVSIFDVETDRLTHSFK 673 (786)
Q Consensus 609 ll~sgs~Dg~I~iwDl~~~-~~~~~~~-------~~i~~i~~sp~g~~Ll~gs~-------dg~I~iwD~~t~~~i~~l~ 673 (786)
+. ... +..|+.|++... ...+.+. ..|.....+++.++++..+- .|.+.+|..+.+ ....++
T Consensus 119 l~-lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ie 195 (494)
T 1bpo_A 119 VA-LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE 195 (494)
T ss_dssp EE-EEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEEC
T ss_pred EE-EEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchhe
Confidence 32 222 678999999742 3444433 34566677889998776553 367889998754 445667
Q ss_pred cCCCCEEEEEEcCCC---CEEEEEeC----CeEEEEECCCC--------e-eEEEEccC---CCceEEEEEeCCCCEEEE
Q 044075 674 GHSTEIHSVCWDTNG---EYLASVSQ----DSVRVWSLASG--------E-CIHELSSS---GNKFHSCIFHPSYPTLMV 734 (786)
Q Consensus 674 ~h~~~I~sv~~spdg---~~Lasgs~----D~I~vwDl~s~--------~-~i~~l~~~---~~~I~sv~fspdg~~L~s 734 (786)
+|......+.+..+. .+|+.+.. .++.|.++... + .+..+... .+-..++.+++....++.
T Consensus 196 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyv 275 (494)
T 1bpo_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (494)
T ss_dssp CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEE
Confidence 776555444433221 24444443 27888888542 1 11111111 334567889999999999
Q ss_pred EECCCeEEEEECCCCeEEEEc-ccCCCeEEEEEcCCCCEEEEEeCCCcE
Q 044075 735 IGGYQSLELWNMAENKCMTIA-AHDCVISALAQSPVTGMVASASHDKSV 782 (786)
Q Consensus 735 gs~dg~I~IwDl~~~~~~~~~-~h~~~V~slafspdg~~LaSgs~DG~I 782 (786)
.+..|.|++||+.++.++... -..+.|...+-+....=++.....|.|
T Consensus 276 iTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 276 ITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 324 (494)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEE
T ss_pred EecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceE
Confidence 999999999999999988443 234445444444444444444455544
No 307
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.66 E-value=0.11 Score=56.93 Aligned_cols=232 Identities=12% Similarity=0.159 Sum_probs=155.9
Q ss_pred EEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCC
Q 044075 515 CHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHN 594 (786)
Q Consensus 515 lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~ 594 (786)
.-.+|..+.||.=. ..++.|+|+++...++.+.-.+ .|.-=.|..+. .|+..+ +..|+-|+++....+.+.+..|.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~ 146 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCG
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecch
Confidence 44566666666554 6889999999998888876554 45566676444 455444 46899999987666677776553
Q ss_pred ----CCeEEEEEecCCCeEEEEEc------CCCcEEEEeCCCCeeeEeecCCeEEE-EEeCCCC----EEEE-EEC---C
Q 044075 595 ----NHVMSLDFHPKKNDLFCSCD------GNSEIRFWNLSQYSCARISKGGTVQV-RFQPRLG----LLLA-AAS---E 655 (786)
Q Consensus 595 ----~~V~sl~~sp~g~~ll~sgs------~Dg~I~iwDl~~~~~~~~~~~~i~~i-~~sp~g~----~Ll~-gs~---d 655 (786)
..|.....+++.+.++++|- -.|.+.+|..+... ...+.++..++ .+..+|. .+++ +.. .
T Consensus 147 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 225 (494)
T 1bpo_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (494)
T ss_dssp GGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTC
T ss_pred hcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 46777778888888876663 24778899887643 33444544443 2333331 2333 222 2
Q ss_pred CeEEEEEcCCC--------cEEEEE-ec---CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEE
Q 044075 656 NVVSIFDVETD--------RLTHSF-KG---HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHS 722 (786)
Q Consensus 656 g~I~iwD~~t~--------~~i~~l-~~---h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~s 722 (786)
+.++|.++... +....+ .. -.+-..++..++....++..+.- .|.+||+.++.++..-+.....|..
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~ 305 (494)
T 1bpo_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV 305 (494)
T ss_dssp CEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred cEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEE
Confidence 78999998543 111111 11 23445677788877777777766 9999999999999998888888887
Q ss_pred EEEeCCCCEEEEEECCCeEEEEECCCCeE
Q 044075 723 CIFHPSYPTLMVIGGYQSLELWNMAENKC 751 (786)
Q Consensus 723 v~fspdg~~L~sgs~dg~I~IwDl~~~~~ 751 (786)
.+.+....-+++....|.|.--.+++...
T Consensus 306 t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 306 TAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred ecccCCCCcEEEEccCceEEEEEEccccc
Confidence 77777777788888888777766665543
No 308
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.64 E-value=0.076 Score=61.89 Aligned_cols=225 Identities=8% Similarity=-0.028 Sum_probs=141.4
Q ss_pred EEEEEECCCeEEEEEcCCCeeee-ecC-CCCCCeEEEEEccCCCEEEEEe-CCCcEEEEcCCCCcceeeeecCCCCCeEE
Q 044075 523 LLASAGHDKKVVVWNMENFQTEC-TPD-DHNHIITDVRFRPNSTQLATSS-FDKTVRIWDAAKPNFCLQTYTGHNNHVMS 599 (786)
Q Consensus 523 ~Lasgs~Dg~V~IWdl~t~~~~~-~l~-~h~~~V~sl~fspdg~~Lasgs-~Dg~I~VWdl~s~~~~~~~~~~h~~~V~s 599 (786)
+|+.+. .+.|+..++....... .+. ..-..+..|+|.+.+..|+.+. ..+.|+.++++.... ...+...-.....
T Consensus 319 ~Ll~~~-~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~-~~v~~~~~~~p~G 396 (619)
T 3s94_A 319 LLLLAR-RTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGS-QFVVTAQIAHPDG 396 (619)
T ss_dssp EEEEEE-SSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCE
T ss_pred EEEEEc-ccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCcc-EEEEECCCCCcCc
Confidence 444443 4567777877543211 111 1224578899998655555554 578899998876432 2233333356788
Q ss_pred EEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEEC--CCeEEEEEcCCCcEEEEEec
Q 044075 600 LDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAAS--ENVVSIFDVETDRLTHSFKG 674 (786)
Q Consensus 600 l~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~--dg~I~iwD~~t~~~i~~l~~ 674 (786)
+++.+.+..++++-...+.|.+.++.......... .....+++.|....|+.+.. ...|...++...........
T Consensus 397 lAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~ 476 (619)
T 3s94_A 397 IAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNT 476 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred eEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeC
Confidence 99998788888887888999999998654333332 45788999998777777764 36787777765433333333
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEEC-CCeEEEEECCCCeE
Q 044075 675 HSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGG-YQSLELWNMAENKC 751 (786)
Q Consensus 675 h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl~~~~~ 751 (786)
.-...+.|++++++..|+.+..+ .|..+++........+.........+++..+ +|+.+.. .+.|...|..++..
T Consensus 477 ~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~--~ly~tD~~~~~I~~~~k~~g~~ 554 (619)
T 3s94_A 477 SLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD--YVYWTDWQRRSIERVHKRSAER 554 (619)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEETT--EEEEECTTSSCEEEEESSSCCE
T ss_pred CCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEECC--EEEEeecCCCeEEEEEcCCCce
Confidence 45678899999987777777655 7999998654322222222223345555543 5555554 34677777776643
No 309
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.61 E-value=0.062 Score=58.04 Aligned_cols=202 Identities=9% Similarity=0.089 Sum_probs=120.7
Q ss_pred CeEEEEEcCCCCEEEEE------------ECCCeEEEEEcCC--Ceee-eecCC-----CCCCeEEEEEcc--CCC-EEE
Q 044075 511 KVTCCHFSSDGKLLASA------------GHDKKVVVWNMEN--FQTE-CTPDD-----HNHIITDVRFRP--NST-QLA 567 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasg------------s~Dg~V~IWdl~t--~~~~-~~l~~-----h~~~V~sl~fsp--dg~-~La 567 (786)
..-.+++.|+|..++++ ..+|.|.++|.++ .+.. ..+.+ .......|.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 45566678877555554 1689999999873 2211 12222 223567777766 354 454
Q ss_pred EEe-C--CCcEEEEcCCCCccee---eeecCC-CCCeEEEEEecCCCeEEEEEc-----------------CCCcEEEEe
Q 044075 568 TSS-F--DKTVRIWDAAKPNFCL---QTYTGH-NNHVMSLDFHPKKNDLFCSCD-----------------GNSEIRFWN 623 (786)
Q Consensus 568 sgs-~--Dg~I~VWdl~s~~~~~---~~~~~h-~~~V~sl~~sp~g~~ll~sgs-----------------~Dg~I~iwD 623 (786)
++. . +.+|.||+++...... ..+.+. -...+++.+.++|..++ +.. ..|.|+.+|
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyv-t~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYA-TNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEE-EESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEe-cCCcEeCCcccccchhhccCCccEEEEEE
Confidence 443 2 4678888776543222 223322 24678999999876443 543 125566666
Q ss_pred CCCCeeeEeecCCeEEEEEeCCCCEEEEEEC-CCeEEEEEcCC-CcE--EEEEecCCCCEEEEEEcC-CCCEEEEEeCC-
Q 044075 624 LSQYSCARISKGGTVQVRFQPRLGLLLAAAS-ENVVSIFDVET-DRL--THSFKGHSTEIHSVCWDT-NGEYLASVSQD- 697 (786)
Q Consensus 624 l~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~-dg~I~iwD~~t-~~~--i~~l~~h~~~I~sv~~sp-dg~~Lasgs~D- 697 (786)
....+.+..--.....++|+|+++.++++.. .+.|..||+.. ++. ...+ ........+++++ +|.+.+++..+
T Consensus 210 ~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g 288 (355)
T 3sre_A 210 PNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNG 288 (355)
T ss_dssp TTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCH
T ss_pred CCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCc
Confidence 5422222222245688999999998888875 68999999863 322 2234 2346678899999 59988877655
Q ss_pred -eEEEEECC--CCeeEEEEc
Q 044075 698 -SVRVWSLA--SGECIHELS 714 (786)
Q Consensus 698 -~I~vwDl~--s~~~i~~l~ 714 (786)
.|..||.. .+..+..+.
T Consensus 289 ~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 289 MRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp HHHHSCCTTSCCCEEEEEEE
T ss_pred eEEEEECCCCCCCCEEEEEE
Confidence 55555554 244444443
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.58 E-value=0.02 Score=61.86 Aligned_cols=222 Identities=13% Similarity=0.089 Sum_probs=127.1
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeee---cCCCCCeEEEEEecC---CCeEEEEEcC---C----Cc
Q 044075 552 HIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTY---TGHNNHVMSLDFHPK---KNDLFCSCDG---N----SE 618 (786)
Q Consensus 552 ~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~---~~h~~~V~sl~~sp~---g~~ll~sgs~---D----g~ 618 (786)
.....|+|.|+++ |+++..+|.|++++. ++...+..+ .........|+|+|+ +..++++... + ..
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4568999999997 555566799999974 332122211 122356889999997 6666655442 3 56
Q ss_pred EEEEeCCCC-------eee-Eeec----CCeEEEEEeCCCCEEEEEEC-------------CCeEEEEEcCCC-------
Q 044075 619 IRFWNLSQY-------SCA-RISK----GGTVQVRFQPRLGLLLAAAS-------------ENVVSIFDVETD------- 666 (786)
Q Consensus 619 I~iwDl~~~-------~~~-~~~~----~~i~~i~~sp~g~~Ll~gs~-------------dg~I~iwD~~t~------- 666 (786)
|..|+.... +.+ .... .....+.|.|++..+++.+. .+.|..++....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 777876643 111 1111 12356899999976665432 245666665432
Q ss_pred --cEEEEEecCCCCEEEEEEcC-CCCEEEEEeCC----eEEEEECCC--------C--------eeEEEEccCCCceEEE
Q 044075 667 --RLTHSFKGHSTEIHSVCWDT-NGEYLASVSQD----SVRVWSLAS--------G--------ECIHELSSSGNKFHSC 723 (786)
Q Consensus 667 --~~i~~l~~h~~~I~sv~~sp-dg~~Lasgs~D----~I~vwDl~s--------~--------~~i~~l~~~~~~I~sv 723 (786)
..+.. .++. ....++|++ ++.++++-... .|.+..... + ..+..+.........+
T Consensus 187 ~~~~i~a-~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~ 264 (354)
T 3a9g_A 187 PNSPIWS-YGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGA 264 (354)
T ss_dssp TTCCEEE-ECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEE
T ss_pred CCCcEEE-EccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcce
Confidence 11221 2233 346899999 67766654322 354433211 0 1222331223456777
Q ss_pred EEe-------CCCCEEEEEECCCeEEEEECCCC-eEE---EEc-ccCCCeEEEEEcCCCCEEEEEe
Q 044075 724 IFH-------PSYPTLMVIGGYQSLELWNMAEN-KCM---TIA-AHDCVISALAQSPVTGMVASAS 777 (786)
Q Consensus 724 ~fs-------pdg~~L~sgs~dg~I~IwDl~~~-~~~---~~~-~h~~~V~slafspdg~~LaSgs 777 (786)
+|. .++.++++.-..+.|...++... +.. .+. .....+.++++.|||.++++..
T Consensus 265 ~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 265 SFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 884 45655555445568888888753 222 222 2246799999999998776664
No 311
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.58 E-value=0.00022 Score=84.78 Aligned_cols=214 Identities=9% Similarity=0.007 Sum_probs=128.0
Q ss_pred CCeEEEEEcCCCCEEEEEE-CCCeEEEEEcCC----CeeeeecCCCCCCeEEEEEccCC-CEEEEEeCCCcEEEEcCCCC
Q 044075 510 SKVTCCHFSSDGKLLASAG-HDKKVVVWNMEN----FQTECTPDDHNHIITDVRFRPNS-TQLATSSFDKTVRIWDAAKP 583 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs-~Dg~V~IWdl~t----~~~~~~l~~h~~~V~sl~fspdg-~~Lasgs~Dg~I~VWdl~s~ 583 (786)
..+..|+|++.+..|+.+. ..+.|+.+++.. ......+.........|++.+.+ +++++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 4567899998766666554 457899999875 22222222222335567887544 44444455788999998754
Q ss_pred cceeeeecCCCCCeEEEEEecCCCeEEEEEcCC-CcEEEEeCCCCeeeEeec---CCeEEEEEeCCCCEEEEEEC-CCeE
Q 044075 584 NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN-SEIRFWNLSQYSCARISK---GGTVQVRFQPRLGLLLAAAS-ENVV 658 (786)
Q Consensus 584 ~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D-g~I~iwDl~~~~~~~~~~---~~i~~i~~sp~g~~Ll~gs~-dg~I 658 (786)
. ....+.........|++.|.+..|+++-... +.|.++++.......... .....|+|+++++.|+++.. .+.|
T Consensus 486 ~-~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 486 K-RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp C-EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred c-eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence 3 2222222234567889999877777555333 788888876543322222 34567999998777766665 5789
Q ss_pred EEEEcCCCcEEEEEe--cCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEEEEE
Q 044075 659 SIFDVETDRLTHSFK--GHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHSCIF 725 (786)
Q Consensus 659 ~iwD~~t~~~i~~l~--~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~sv~f 725 (786)
.++|+........+. ........|++..+ .++++.... .|..+|..+++.+..+.........|++
T Consensus 565 ~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 565 SSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 633 (699)
T ss_dssp EEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCB
T ss_pred EEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEE
Confidence 999987543322222 11233445666544 333343344 8999999888887777543333444443
No 312
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.52 E-value=0.11 Score=65.07 Aligned_cols=214 Identities=10% Similarity=0.060 Sum_probs=128.7
Q ss_pred EEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcC------------------------------
Q 044075 566 LATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDG------------------------------ 615 (786)
Q Consensus 566 Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~------------------------------ 615 (786)
++..+ ++.++|..+++..........-...+..++++|..+.+++.++.
T Consensus 709 ~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1158)
T 3ei3_A 709 LALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK 787 (1158)
T ss_dssp EEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCC
T ss_pred EEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccc
Confidence 44333 56699988765332222222234678888898877765544421
Q ss_pred ------------------CCcEEEEeCCCCeeeEeec----CCeEEEE---EeC-CCCEEEEEE----------CCCeEE
Q 044075 616 ------------------NSEIRFWNLSQYSCARISK----GGTVQVR---FQP-RLGLLLAAA----------SENVVS 659 (786)
Q Consensus 616 ------------------Dg~I~iwDl~~~~~~~~~~----~~i~~i~---~sp-~g~~Ll~gs----------~dg~I~ 659 (786)
-+.|++.|..+.+.+..+. ..+.+++ |.. ...+|++|+ ..|.|+
T Consensus 788 ~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~ 867 (1158)
T 3ei3_A 788 LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIV 867 (1158)
T ss_dssp CC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEE
T ss_pred cccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEE
Confidence 0235666666666554433 2233333 322 246888887 247899
Q ss_pred EEEcCCCcE--EEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEE-EEccCCCceEEEEEeCCCCEEEEEE
Q 044075 660 IFDVETDRL--THSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIH-ELSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 660 iwD~~t~~~--i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~-~l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
+|++..+++ ++... ..+.|++++-- +| +|+++-..+|++|++...+.+. ...... .|..+.....+.++++|.
T Consensus 868 vf~v~~~kL~lv~~~~-v~g~v~al~~~-~g-~Lla~ig~~l~vy~l~~~~~L~~~~~~~~-~i~~~~l~~~~~~I~vgD 943 (1158)
T 3ei3_A 868 VFQYSDGKLQTVAEKE-VKGAVYSMVEF-NG-KLLASINSTVRLYEWTTEKELRTECNHYN-NIMALYLKTKGDFILVGD 943 (1158)
T ss_dssp EEEEETTEEEEEEEEE-ESSCEEEEEEE-TT-EEEEEETTEEEEEEECTTSCEEEEEEECC-CSCEEEEEEETTEEEEEE
T ss_pred EEEEECCEEEEEEEEE-cCCcCEEEeee-CC-EEEEEcCCEEEEEECCCCceEEEEeeccc-cEEEEEEeccCCEEEEEE
Confidence 999975533 22222 46788888743 34 6666666799999998765443 111121 133333333567899999
Q ss_pred CCCeEEE--EECCCCeEEEEc--ccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 737 GYQSLEL--WNMAENKCMTIA--AHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 737 ~dg~I~I--wDl~~~~~~~~~--~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
.-..|.+ |+...++...+. .+...++++.|-.++ .++.+..+|.|.+.
T Consensus 944 ~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl 995 (1158)
T 3ei3_A 944 LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVC 995 (1158)
T ss_dssp SSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEE
T ss_pred hhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEE
Confidence 8887665 556666665444 345678888887554 67778899988875
No 313
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.49 E-value=0.026 Score=60.13 Aligned_cols=203 Identities=10% Similarity=0.089 Sum_probs=127.1
Q ss_pred CCCCCeEEEEEccCCCEEEEEe-CCCcEEEEcCCCCcceeeeecC----CC--CCeEEEEE---ecCCCeEEEEEc----
Q 044075 549 DHNHIITDVRFRPNSTQLATSS-FDKTVRIWDAAKPNFCLQTYTG----HN--NHVMSLDF---HPKKNDLFCSCD---- 614 (786)
Q Consensus 549 ~h~~~V~sl~fspdg~~Lasgs-~Dg~I~VWdl~s~~~~~~~~~~----h~--~~V~sl~~---sp~g~~ll~sgs---- 614 (786)
.....-.+++|.+....|+.++ ..++|..||...+......+.+ .. ..+..|.| .|+ ..|+++..
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~a 88 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKS 88 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccc
Confidence 3344456789988666666666 7899999999755422222322 11 13578999 577 44554443
Q ss_pred ---------CCCcEEEEeCC---CCeeeEeec----------------CCeEEEEEeCCCCEEEEEECC-CeEEEEEcCC
Q 044075 615 ---------GNSEIRFWNLS---QYSCARISK----------------GGTVQVRFQPRLGLLLAAASE-NVVSIFDVET 665 (786)
Q Consensus 615 ---------~Dg~I~iwDl~---~~~~~~~~~----------------~~i~~i~~sp~g~~Ll~gs~d-g~I~iwD~~t 665 (786)
.+..|..||+. +++.+.... .....+++.++|+..++++.. +.|..++...
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC
Confidence 26789999999 665543322 136789999999999999988 8888888775
Q ss_pred CcEEEEEec-----CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCee--EEEEc-cC---CCceEEE-EEeCCCCEE
Q 044075 666 DRLTHSFKG-----HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGEC--IHELS-SS---GNKFHSC-IFHPSYPTL 732 (786)
Q Consensus 666 ~~~i~~l~~-----h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~--i~~l~-~~---~~~I~sv-~fspdg~~L 732 (786)
.....-+.. .....+.|+++|+|+.|++...+ .|..+|+..... +..-. +. ......+ ....+|+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vl 248 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESV 248 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEE
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEE
Confidence 533322211 12236799999999988887667 899999885433 22110 11 1223333 334467774
Q ss_pred EEE-ECCCeEEEEECCCCeEE
Q 044075 733 MVI-GGYQSLELWNMAENKCM 752 (786)
Q Consensus 733 ~sg-s~dg~I~IwDl~~~~~~ 752 (786)
+++ ...+.+.+.+.+..+..
T Consensus 249 lV~~~~~~~~~l~S~DgW~sa 269 (334)
T 2p9w_A 249 LVGARAPYAISFRSWDNWKSA 269 (334)
T ss_dssp EEEEETTEEEEEECSSTTSEE
T ss_pred EEEcCCCCEEEEECCCCccee
Confidence 444 44556666666554443
No 314
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.48 E-value=0.025 Score=60.17 Aligned_cols=200 Identities=9% Similarity=0.072 Sum_probs=123.1
Q ss_pred cCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEEcCCCeeeee-cCC----CC--CCeEEEEE---ccCCCEEEEEeC----
Q 044075 507 KSSSKVTCCHFSSDGKLLASAG-HDKKVVVWNMENFQTECT-PDD----HN--HIITDVRF---RPNSTQLATSSF---- 571 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~Lasgs-~Dg~V~IWdl~t~~~~~~-l~~----h~--~~V~sl~f---spdg~~Lasgs~---- 571 (786)
...---.|++|.+....|..++ ..+.|..|+...+..... +.. .. ..+..|.| .|+++++++...
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 3444456889988555666555 789999999885543333 322 11 14689999 588777765431
Q ss_pred ---------CCcEEEEcCC---CCcceee-eecC-----------CCCCeEEEEEecCCCeEEEEEcCC-CcEEEEeCCC
Q 044075 572 ---------DKTVRIWDAA---KPNFCLQ-TYTG-----------HNNHVMSLDFHPKKNDLFCSCDGN-SEIRFWNLSQ 626 (786)
Q Consensus 572 ---------Dg~I~VWdl~---s~~~~~~-~~~~-----------h~~~V~sl~~sp~g~~ll~sgs~D-g~I~iwDl~~ 626 (786)
+..|..||+. +++.... .+.. -...+..++..++|+.++ +++.. +.|..++...
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYV-t~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYV-AFALGMPAIARVSADG 168 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEE-EEEESSCEEEEECTTS
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEE-eCCCCCCeEEEEeCCC
Confidence 5779999998 5553221 1111 113478999999988665 66666 7777777765
Q ss_pred CeeeEeec--------CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcE--EEEEe-cC---CCCEEEE-EEcCCCCEE
Q 044075 627 YSCARISK--------GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRL--THSFK-GH---STEIHSV-CWDTNGEYL 691 (786)
Q Consensus 627 ~~~~~~~~--------~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~--i~~l~-~h---~~~I~sv-~~spdg~~L 691 (786)
........ .....|+++|++..|++....+.|..+|+.+... +..-. +. -.....| ..-.+|+.|
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vl 248 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESV 248 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEE
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEE
Confidence 43222111 2356899999999999998899999999885432 22110 21 1223443 333477774
Q ss_pred EEE-eCC-eEEEEECCCC
Q 044075 692 ASV-SQD-SVRVWSLASG 707 (786)
Q Consensus 692 asg-s~D-~I~vwDl~s~ 707 (786)
+++ ... .+.+.+....
T Consensus 249 lV~~~~~~~~~l~S~DgW 266 (334)
T 2p9w_A 249 LVGARAPYAISFRSWDNW 266 (334)
T ss_dssp EEEEETTEEEEEECSSTT
T ss_pred EEEcCCCCEEEEECCCCc
Confidence 444 444 5556555443
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.47 E-value=0.013 Score=61.45 Aligned_cols=223 Identities=11% Similarity=0.086 Sum_probs=116.3
Q ss_pred CEEEEEEC--CCeEEEEEcCCCeeeee--cCCCCCCeEEEEEccCCCEEEEEeCC----CcEEEEcCCCCcceeee-ecC
Q 044075 522 KLLASAGH--DKKVVVWNMENFQTECT--PDDHNHIITDVRFRPNSTQLATSSFD----KTVRIWDAAKPNFCLQT-YTG 592 (786)
Q Consensus 522 ~~Lasgs~--Dg~V~IWdl~t~~~~~~--l~~h~~~V~sl~fspdg~~Lasgs~D----g~I~VWdl~s~~~~~~~-~~~ 592 (786)
.+++.|+. ...+.+||..+.+-... +.........+.+ ++.+++.|+.+ ..+.+||+.+....... +..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34555654 35788999887543322 2222222222222 56677777755 56888999887642221 111
Q ss_pred CCCCeEEEEEecCCCeEEEEEcCC------CcEEEEeCCCCeeeEeecC---CeEEEEEeCCCCEEEEEEC---------
Q 044075 593 HNNHVMSLDFHPKKNDLFCSCDGN------SEIRFWNLSQYSCARISKG---GTVQVRFQPRLGLLLAAAS--------- 654 (786)
Q Consensus 593 h~~~V~sl~~sp~g~~ll~sgs~D------g~I~iwDl~~~~~~~~~~~---~i~~i~~sp~g~~Ll~gs~--------- 654 (786)
.......+. . ++.+++.|+.+ ..+.+||+.+.+-...... .....+...++..++.|+.
T Consensus 91 ~r~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 91 PRDSLAACA-A--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp CCBSCEEEE-E--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEE
T ss_pred cccceeEEE-E--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccc
Confidence 111222222 2 35566676654 4688999988764443221 1111112235555566553
Q ss_pred CCeEEEEEcCCCcEEEEE--ecCCCCEEEEEEcCCCCEEEEEeC------CeEEEEECCCCeeEE--EEccCCCceEEEE
Q 044075 655 ENVVSIFDVETDRLTHSF--KGHSTEIHSVCWDTNGEYLASVSQ------DSVRVWSLASGECIH--ELSSSGNKFHSCI 724 (786)
Q Consensus 655 dg~I~iwD~~t~~~i~~l--~~h~~~I~sv~~spdg~~Lasgs~------D~I~vwDl~s~~~i~--~l~~~~~~I~sv~ 724 (786)
...+.+||..+.+-...- ......-..+.+ ++++++.|+. +.+.+||+.+.+-.. .+.........+.
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA 245 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE
Confidence 345889999887433221 111111122222 5666666653 258899998764221 1111112222333
Q ss_pred EeCCCCEEEEEECC-----CeEEEEECCCCeEEE
Q 044075 725 FHPSYPTLMVIGGY-----QSLELWNMAENKCMT 753 (786)
Q Consensus 725 fspdg~~L~sgs~d-----g~I~IwDl~~~~~~~ 753 (786)
+ ++..++.|+.+ ..|.+||+.+.+...
T Consensus 246 ~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~ 277 (306)
T 3ii7_A 246 V--GSIVYVLAGFQGVGRLGHILEYNTETDKWVA 277 (306)
T ss_dssp E--TTEEEEEECBCSSSBCCEEEEEETTTTEEEE
T ss_pred E--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEe
Confidence 3 56666777644 478999999887653
No 316
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.42 E-value=0.038 Score=59.60 Aligned_cols=221 Identities=12% Similarity=0.087 Sum_probs=122.5
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec-------CCCCCCeEEEEEccC---CCEEEEEeC--------
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP-------DDHNHIITDVRFRPN---STQLATSSF-------- 571 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l-------~~h~~~V~sl~fspd---g~~Lasgs~-------- 571 (786)
.....|+|.|+|++|+++...|.|++++.+ +.....+ .........|+|+|+ +..|+++..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 357899999999934455578999999853 3322111 122345789999996 455554432
Q ss_pred CCcEEEEcCCCCc----c---eeeeec---CCCCCeEEEEEecCCCeEEEEEcC-------------CCcEEEEeCCCC-
Q 044075 572 DKTVRIWDAAKPN----F---CLQTYT---GHNNHVMSLDFHPKKNDLFCSCDG-------------NSEIRFWNLSQY- 627 (786)
Q Consensus 572 Dg~I~VWdl~s~~----~---~~~~~~---~h~~~V~sl~~sp~g~~ll~sgs~-------------Dg~I~iwDl~~~- 627 (786)
...|..|++.... . ++..+. ........|.|.|++. |+++.+. .|.|.-++....
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 2346666664321 0 111111 1112246799999985 4444432 246777776532
Q ss_pred --------------eeeEeecCCeEEEEEeCCCCEEEEEECCC----eEEEEEcCCC-----------------------
Q 044075 628 --------------SCARISKGGTVQVRFQPRLGLLLAAASEN----VVSIFDVETD----------------------- 666 (786)
Q Consensus 628 --------------~~~~~~~~~i~~i~~sp~g~~Ll~gs~dg----~I~iwD~~t~----------------------- 666 (786)
+....-......++|++....|+++.... .|.+. ..+
T Consensus 176 p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i--~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIP--QKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECC--CTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEe--ccCCcCCCCCccCCCCCCCCccCccc
Confidence 11111113356789999555666655431 23221 111
Q ss_pred --------cEEEEEecCCCCEEEEEEcC-------CCCEEEEEeCC-eEEEEECCCCeeEEE--E-ccCCCceEEEEEeC
Q 044075 667 --------RLTHSFKGHSTEIHSVCWDT-------NGEYLASVSQD-SVRVWSLASGECIHE--L-SSSGNKFHSCIFHP 727 (786)
Q Consensus 667 --------~~i~~l~~h~~~I~sv~~sp-------dg~~Lasgs~D-~I~vwDl~s~~~i~~--l-~~~~~~I~sv~fsp 727 (786)
.++..+. +...+..+.|.. +|.++++.... .|...++..++.+.. + ......+..+++.|
T Consensus 254 ~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p 332 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP 332 (353)
T ss_dssp BSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECT
T ss_pred CCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECC
Confidence 1122222 234577788864 46666665555 888888876654432 2 22245789999999
Q ss_pred CCCEEEEE
Q 044075 728 SYPTLMVI 735 (786)
Q Consensus 728 dg~~L~sg 735 (786)
+|..+++.
T Consensus 333 dG~lyv~t 340 (353)
T 2g8s_A 333 DGYLYVLT 340 (353)
T ss_dssp TSCEEEEE
T ss_pred CCcEEEEE
Confidence 99855443
No 317
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.42 E-value=0.0092 Score=64.60 Aligned_cols=189 Identities=8% Similarity=0.067 Sum_probs=109.6
Q ss_pred eEEEEEccCCCEEEEE------------eCCCcEEEEcCCCC--cceeeeecC-----CCCCeEEEEEec--CCC-eEEE
Q 044075 554 ITDVRFRPNSTQLATS------------SFDKTVRIWDAAKP--NFCLQTYTG-----HNNHVMSLDFHP--KKN-DLFC 611 (786)
Q Consensus 554 V~sl~fspdg~~Lasg------------s~Dg~I~VWdl~s~--~~~~~~~~~-----h~~~V~sl~~sp--~g~-~ll~ 611 (786)
..++...|+|..++++ ..+|.|.++|+.+. +.....+.+ .......|.+.+ ++. ++++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 4455666665443333 26899999998743 211112222 224677888876 344 3554
Q ss_pred EEcC--CCcEEEEeCCCC--eee--Eeec----CCeEEEEEeCCCCEEEEEEC-----------------CCeEEEEEcC
Q 044075 612 SCDG--NSEIRFWNLSQY--SCA--RISK----GGTVQVRFQPRLGLLLAAAS-----------------ENVVSIFDVE 664 (786)
Q Consensus 612 sgs~--Dg~I~iwDl~~~--~~~--~~~~----~~i~~i~~sp~g~~Ll~gs~-----------------dg~I~iwD~~ 664 (786)
+-.. +..|.+|++... ... .... .....+.+.++|.++++... .+.|+.+|..
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 4333 567778776542 222 2222 34578889999876665431 2456666553
Q ss_pred CCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCC-Cee--EEEEccCCCceEEEEEeC-CCCEEEEEECC
Q 044075 665 TDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD--SVRVWSLAS-GEC--IHELSSSGNKFHSCIFHP-SYPTLMVIGGY 738 (786)
Q Consensus 665 t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s-~~~--i~~l~~~~~~I~sv~fsp-dg~~L~sgs~d 738 (786)
+.. .+...-...+.|+|+||++.|+++... .|..|++.. ++. ...+ ........+++.+ +|.+.+++..+
T Consensus 212 --~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 212 --DVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp --CCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred --eEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 222 222223457899999999988877654 899999863 322 2233 2345677889999 58877766544
Q ss_pred C-eEEEEEC
Q 044075 739 Q-SLELWNM 746 (786)
Q Consensus 739 g-~I~IwDl 746 (786)
+ .|..|+.
T Consensus 288 g~~v~~~~P 296 (355)
T 3sre_A 288 GMRIFFYDA 296 (355)
T ss_dssp HHHHHSCCT
T ss_pred ceEEEEECC
Confidence 2 3444443
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.42 E-value=0.012 Score=61.46 Aligned_cols=225 Identities=13% Similarity=0.122 Sum_probs=114.8
Q ss_pred CCEEEEEECC----CeEEEEEcCCCeeeee--cCCCCCCeEEEEEccCCCEEEEEeCC-----CcEEEEcCCCCcceeee
Q 044075 521 GKLLASAGHD----KKVVVWNMENFQTECT--PDDHNHIITDVRFRPNSTQLATSSFD-----KTVRIWDAAKPNFCLQT 589 (786)
Q Consensus 521 g~~Lasgs~D----g~V~IWdl~t~~~~~~--l~~h~~~V~sl~fspdg~~Lasgs~D-----g~I~VWdl~s~~~~~~~ 589 (786)
+.+++.|+.+ ..+.+||+.+.+-... +......-..+.+ ++.+++.|+.+ ..+.+||..+.+.....
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 3455555543 3588888877553322 1111111122222 56677777754 35888998876642221
Q ss_pred -ecCCCCCeEEEEEecCCCeEEEEEcCCC-----cEEEEeCCCCeeeEeec--CC-e-EEEEEeCCCCEEEEEEC-----
Q 044075 590 -YTGHNNHVMSLDFHPKKNDLFCSCDGNS-----EIRFWNLSQYSCARISK--GG-T-VQVRFQPRLGLLLAAAS----- 654 (786)
Q Consensus 590 -~~~h~~~V~sl~~sp~g~~ll~sgs~Dg-----~I~iwDl~~~~~~~~~~--~~-i-~~i~~sp~g~~Ll~gs~----- 654 (786)
+....... +++.. ++.+++.|+.++ .+.+||+.+.+-..... .. . ..++. .++..++.|+.
T Consensus 94 ~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 94 NMRDRRSTL-GAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASR 169 (302)
T ss_dssp CCSSCCBSC-EEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTT
T ss_pred CCCccccce-EEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCC
Confidence 11111122 22222 345666665443 57788988766444322 11 1 11222 24555566554
Q ss_pred --CCeEEEEEcCCCcEEEE--EecCCCCEEEEEEcCCCCEEEEEeCC------eEEEEECCCCeeEEE--EccCCCceEE
Q 044075 655 --ENVVSIFDVETDRLTHS--FKGHSTEIHSVCWDTNGEYLASVSQD------SVRVWSLASGECIHE--LSSSGNKFHS 722 (786)
Q Consensus 655 --dg~I~iwD~~t~~~i~~--l~~h~~~I~sv~~spdg~~Lasgs~D------~I~vwDl~s~~~i~~--l~~~~~~I~s 722 (786)
...+.+||+.+.+-... +.........+. -++++++.|+.+ .+.+||+.+.+-... +....... .
T Consensus 170 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~ 246 (302)
T 2xn4_A 170 QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNA-G 246 (302)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-E
T ss_pred ccccEEEEEeCCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccC-e
Confidence 24588999987743322 111111122222 256667776532 588999987643322 11111111 2
Q ss_pred EEEeCCCCEEEEEECCC-----eEEEEECCCCeEEEEc
Q 044075 723 CIFHPSYPTLMVIGGYQ-----SLELWNMAENKCMTIA 755 (786)
Q Consensus 723 v~fspdg~~L~sgs~dg-----~I~IwDl~~~~~~~~~ 755 (786)
++. -++..++.|+.++ .|.+||+.+++...+.
T Consensus 247 ~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 247 VCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp EEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred EEE-ECCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 222 2566666666553 5899999988776543
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.35 E-value=0.017 Score=62.36 Aligned_cols=225 Identities=10% Similarity=0.107 Sum_probs=124.7
Q ss_pred CeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc-eee----eecCCCCCeEEEEEecC---CCeEEEEEcC-------CC
Q 044075 553 IITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF-CLQ----TYTGHNNHVMSLDFHPK---KNDLFCSCDG-------NS 617 (786)
Q Consensus 553 ~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~-~~~----~~~~h~~~V~sl~~sp~---g~~ll~sgs~-------Dg 617 (786)
....|+|.|+++.|+++...|.|++++...... .+. .+.........|+|+|+ +..++++... ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 467999999998344556789999998532110 011 11122345789999996 5666655433 23
Q ss_pred cEEEEeCCCC-----eeeEe---ec------CCeEEEEEeCCCCEEEEEEC-------------CCeEEEEEcCCC----
Q 044075 618 EIRFWNLSQY-----SCARI---SK------GGTVQVRFQPRLGLLLAAAS-------------ENVVSIFDVETD---- 666 (786)
Q Consensus 618 ~I~iwDl~~~-----~~~~~---~~------~~i~~i~~sp~g~~Ll~gs~-------------dg~I~iwD~~t~---- 666 (786)
.|..|++... ....+ .. .....+.|.|++..+++.+. .+.|.-+|....
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~ 178 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD 178 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence 5666666432 11111 11 11346999999854444433 246777776532
Q ss_pred ----------cEEEEEecCCCCEEEEEEcC-CCCEEEEEeC----CeEEEEECCCCe-----------------------
Q 044075 667 ----------RLTHSFKGHSTEIHSVCWDT-NGEYLASVSQ----DSVRVWSLASGE----------------------- 708 (786)
Q Consensus 667 ----------~~i~~l~~h~~~I~sv~~sp-dg~~Lasgs~----D~I~vwDl~s~~----------------------- 708 (786)
..+.. .+| .....++|++ ++.++++-.. |.|.+. ..+.
T Consensus 179 npf~~~~~~~~~i~a-~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i--~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 179 NPFIKESGVRAEIWS-YGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIP--QKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp CTTTTSTTSCTTEEE-ECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECC--CTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCcCCCCCCccEEE-EcC-cCccceEEECCCCCEEEEecCCCCCcEEeEe--ccCCcCCCCCccCCCCCCCCccCcccC
Confidence 11111 123 3467899999 6666555432 133322 1111
Q ss_pred --------eEEEEccCCCceEEEEEeC-------CCCEEEEEECCCeEEEEECCCCeEE---EEc-ccCCCeEEEEEcCC
Q 044075 709 --------CIHELSSSGNKFHSCIFHP-------SYPTLMVIGGYQSLELWNMAENKCM---TIA-AHDCVISALAQSPV 769 (786)
Q Consensus 709 --------~i~~l~~~~~~I~sv~fsp-------dg~~L~sgs~dg~I~IwDl~~~~~~---~~~-~h~~~V~slafspd 769 (786)
.+..+.. ......+.|.. ++.++++.-..+.|...++..++.. .+. .....+..+++.||
T Consensus 255 ~~~~~~~~P~~~~~~-~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd 333 (353)
T 2g8s_A 255 EIVAGTEQPVFYWKD-SPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPD 333 (353)
T ss_dssp SSCTTSCCCSEEESS-CCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTT
T ss_pred CCCCCccCCeEEeCC-CcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCC
Confidence 1112221 23456677764 3555555445668888888766543 122 23458999999999
Q ss_pred CCEEEEEe-CCCcE
Q 044075 770 TGMVASAS-HDKSV 782 (786)
Q Consensus 770 g~~LaSgs-~DG~I 782 (786)
|.++++.. .+|.|
T Consensus 334 G~lyv~td~~~g~I 347 (353)
T 2g8s_A 334 GYLYVLTDESSGEL 347 (353)
T ss_dssp SCEEEEECSTTEEE
T ss_pred CcEEEEEeCCCCEE
Confidence 98666543 34543
No 320
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.34 E-value=0.12 Score=55.54 Aligned_cols=221 Identities=12% Similarity=0.112 Sum_probs=125.0
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce-eeee----cCCCCCeEEEEEecC---CCeEEEEE--cCCCcEE
Q 044075 551 NHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC-LQTY----TGHNNHVMSLDFHPK---KNDLFCSC--DGNSEIR 620 (786)
Q Consensus 551 ~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~-~~~~----~~h~~~V~sl~~sp~---g~~ll~sg--s~Dg~I~ 620 (786)
-...+.|+|.|++.++++--..|.|++++..++... +..+ .........|+++|+ +..++++- ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 345689999999987666555899999987654421 1111 223456899999995 45555432 2455666
Q ss_pred EEeCCCC----------eee-Eeec----CCeEEEEEeCCCCEEEEEEC-------------CCeEEEEEcCCC------
Q 044075 621 FWNLSQY----------SCA-RISK----GGTVQVRFQPRLGLLLAAAS-------------ENVVSIFDVETD------ 666 (786)
Q Consensus 621 iwDl~~~----------~~~-~~~~----~~i~~i~~sp~g~~Ll~gs~-------------dg~I~iwD~~t~------ 666 (786)
-|.+... +.+ .... .....+.|.|++..+++.+. .|.|.-++....
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 6665541 111 1111 12345899999977666542 355665665432
Q ss_pred ---cEEEEEecCCCCEEEEEEcCCCCEEEEEeC-C---eEEEEECCCCe------------------eEEEEccCCCceE
Q 044075 667 ---RLTHSFKGHSTEIHSVCWDTNGEYLASVSQ-D---SVRVWSLASGE------------------CIHELSSSGNKFH 721 (786)
Q Consensus 667 ---~~i~~l~~h~~~I~sv~~spdg~~Lasgs~-D---~I~vwDl~s~~------------------~i~~l~~~~~~I~ 721 (786)
..+.. .+|. ....++|+|+|.++++-.. + .|.+. ..+. ++..+..+.....
T Consensus 191 f~~~~i~a-~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i--~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~ 266 (347)
T 3das_A 191 FPGSPVYS-YGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAI--KPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPS 266 (347)
T ss_dssp STTCCEEE-BCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEE--CTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEE
T ss_pred CCCCeEEe-eCCC-CcceEEECCCCCEEEEecCCCCCceeeEE--cCCCEecCCcccCCCCCccccCCcEecCCCCCCCc
Confidence 11221 2343 3568999999887765432 2 34433 2211 1222222223455
Q ss_pred EEEEeCCCCEEEEEEC-CCeEEEEECCCCeE----E-EEcccCCCeEEEEEcCCCCEEEEEe
Q 044075 722 SCIFHPSYPTLMVIGG-YQSLELWNMAENKC----M-TIAAHDCVISALAQSPVTGMVASAS 777 (786)
Q Consensus 722 sv~fspdg~~L~sgs~-dg~I~IwDl~~~~~----~-~~~~h~~~V~slafspdg~~LaSgs 777 (786)
.++|.. +. ++.+.. .+.|....+..... . .+.+....+.+|+..|||.++++.+
T Consensus 267 G~~~~~-g~-~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 267 GIAYAE-GS-VWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEET-TE-EEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred ceEEEc-Cc-eeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 667763 33 444444 34666666655432 1 2333456899999999998776654
No 321
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.30 E-value=0.15 Score=54.75 Aligned_cols=235 Identities=7% Similarity=0.019 Sum_probs=126.6
Q ss_pred eeEEeecCCCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeee--eec----CCCCCCeEEEEEccC---CCEEEEE-e
Q 044075 501 EVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTE--CTP----DDHNHIITDVRFRPN---STQLATS-S 570 (786)
Q Consensus 501 ~v~~l~~H~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~--~~l----~~h~~~V~sl~fspd---g~~Lasg-s 570 (786)
.+..+-..-...+.|+|.|||.++++--..|.|++++..+++.. ..+ .........|+|+|+ +..|+++ +
T Consensus 23 ~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 33444445567899999999997777644899999986655432 212 223456899999995 3445443 2
Q ss_pred --CCCcEEEEcCCCC----------cceeeeec-CCCCCeEEEEEecCCCeEEEEEc------------CCCcEEEEeCC
Q 044075 571 --FDKTVRIWDAAKP----------NFCLQTYT-GHNNHVMSLDFHPKKNDLFCSCD------------GNSEIRFWNLS 625 (786)
Q Consensus 571 --~Dg~I~VWdl~s~----------~~~~~~~~-~h~~~V~sl~~sp~g~~ll~sgs------------~Dg~I~iwDl~ 625 (786)
.+..|.-|.+... +.++..+. ........|.|.|++..++.+++ ..|.|.-++..
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 3455666655431 11111121 11123467999999865543332 13556555654
Q ss_pred CC----------eeeEeecCCeEEEEEeCCCCEEEEEEC-CCeEEEEEcCCCc------------------EEEEEecCC
Q 044075 626 QY----------SCARISKGGTVQVRFQPRLGLLLAAAS-ENVVSIFDVETDR------------------LTHSFKGHS 676 (786)
Q Consensus 626 ~~----------~~~~~~~~~i~~i~~sp~g~~Ll~gs~-dg~I~iwD~~t~~------------------~i~~l~~h~ 676 (786)
.. +....-......++|+|++..+++-.. ++.-.|.-++.+. ++..+..+.
T Consensus 183 G~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~ 262 (347)
T 3das_A 183 GEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDE 262 (347)
T ss_dssp SSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTT
T ss_pred CCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCC
Confidence 32 111111123467899997654443321 2222222222221 122222222
Q ss_pred CCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCe----eEEEEccCCCceEEEEEeCCCCEEEEEE
Q 044075 677 TEIHSVCWDTNGEYLASVSQD-SVRVWSLASGE----CIHELSSSGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 677 ~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~----~i~~l~~~~~~I~sv~fspdg~~L~sgs 736 (786)
.....++|. ++..++..-.. .|....+.... ....+......+..++..|+|..+++..
T Consensus 263 ~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 263 ASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp CCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 356677776 45555555555 66666665443 2233334456789999999987555544
No 322
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.23 E-value=0.015 Score=61.07 Aligned_cols=224 Identities=8% Similarity=0.028 Sum_probs=116.3
Q ss_pred CCCEEEEEECC----CeEEEEEcCCCeeeee--cCCCCCCeEEEEEccCCCEEEEEeC----C-----CcEEEEcCCCCc
Q 044075 520 DGKLLASAGHD----KKVVVWNMENFQTECT--PDDHNHIITDVRFRPNSTQLATSSF----D-----KTVRIWDAAKPN 584 (786)
Q Consensus 520 dg~~Lasgs~D----g~V~IWdl~t~~~~~~--l~~h~~~V~sl~fspdg~~Lasgs~----D-----g~I~VWdl~s~~ 584 (786)
++.+++.|+.+ ..+.+||..+.+-... +......-..+.+ ++.+++.|+. + ..+.+||+.+..
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 56677777642 3688999887553322 1111111122222 5667777765 2 468889988765
Q ss_pred ceeee-ecCCCCCeEEEEEecCCCeEEEEEcCC-----CcEEEEeCCCCeeeEeec-----CCeEEEEEeCCCCEEEEEE
Q 044075 585 FCLQT-YTGHNNHVMSLDFHPKKNDLFCSCDGN-----SEIRFWNLSQYSCARISK-----GGTVQVRFQPRLGLLLAAA 653 (786)
Q Consensus 585 ~~~~~-~~~h~~~V~sl~~sp~g~~ll~sgs~D-----g~I~iwDl~~~~~~~~~~-----~~i~~i~~sp~g~~Ll~gs 653 (786)
..... +.........+.+ ++.+++.|+.+ ..+.+||+.+.+-..... .....+.+ ++..++.|+
T Consensus 102 W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 176 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI---DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGG 176 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE---TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred EeECCCCCcCccccEEEEE---CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeC
Confidence 32211 1111122222222 34566666533 468899998765443322 11122222 556666666
Q ss_pred CC-----CeEEEEEcCCCcEEEE--EecCCCCEEEEEEcCCCCEEEEEeC------CeEEEEECCCCeeEEE--EccCCC
Q 044075 654 SE-----NVVSIFDVETDRLTHS--FKGHSTEIHSVCWDTNGEYLASVSQ------DSVRVWSLASGECIHE--LSSSGN 718 (786)
Q Consensus 654 ~d-----g~I~iwD~~t~~~i~~--l~~h~~~I~sv~~spdg~~Lasgs~------D~I~vwDl~s~~~i~~--l~~~~~ 718 (786)
.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+. +.+.+||+.+.+-... +.....
T Consensus 177 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 254 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRS 254 (308)
T ss_dssp BCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCB
T ss_pred CCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCcc
Confidence 54 4689999987643321 1111111222232 5666666653 2589999987643321 111111
Q ss_pred ceEEEEEeCCCCEEEEEECC-----CeEEEEECCCCeEEEE
Q 044075 719 KFHSCIFHPSYPTLMVIGGY-----QSLELWNMAENKCMTI 754 (786)
Q Consensus 719 ~I~sv~fspdg~~L~sgs~d-----g~I~IwDl~~~~~~~~ 754 (786)
.. +++.. ++..++.|+.+ ..|.+||+.+.+...+
T Consensus 255 ~~-~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 255 AL-GITVH-QGRIYVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp SC-EEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred ce-EEEEE-CCEEEEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 12 22222 55666666643 3688999998876544
No 323
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.22 E-value=0.014 Score=60.95 Aligned_cols=210 Identities=12% Similarity=0.121 Sum_probs=107.1
Q ss_pred CCCEEEEEe-CC-----CcEEEEcCCCCcceeee-ecCCCCCeEEEEEecCCCeEEEEEcCC-----CcEEEEeCCCCe-
Q 044075 562 NSTQLATSS-FD-----KTVRIWDAAKPNFCLQT-YTGHNNHVMSLDFHPKKNDLFCSCDGN-----SEIRFWNLSQYS- 628 (786)
Q Consensus 562 dg~~Lasgs-~D-----g~I~VWdl~s~~~~~~~-~~~h~~~V~sl~~sp~g~~ll~sgs~D-----g~I~iwDl~~~~- 628 (786)
++.+++.|+ .+ ..+.+||+.+.+..... +....... +++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYV-ASVSL--HDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE--TTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccc-cEEEE--CCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 344566665 22 36888998876532211 11111112 22222 35566677654 468999988765
Q ss_pred --eeEeec--C-CeEEEEEeCCCCEEEEEECC-----CeEEEEEcCCCcEEE--EEecCCCCEEEEEEcCCCCEEEEEeC
Q 044075 629 --CARISK--G-GTVQVRFQPRLGLLLAAASE-----NVVSIFDVETDRLTH--SFKGHSTEIHSVCWDTNGEYLASVSQ 696 (786)
Q Consensus 629 --~~~~~~--~-~i~~i~~sp~g~~Ll~gs~d-----g~I~iwD~~t~~~i~--~l~~h~~~I~sv~~spdg~~Lasgs~ 696 (786)
-..... . .....+...++..++.|+.+ ..+.+||..+.+-.. .+.........+. .++++++.|+.
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~ 168 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGY 168 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCB
T ss_pred CeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCC
Confidence 332221 1 11111112255566666543 468999998774332 2221111122222 26666666653
Q ss_pred ------CeEEEEECCCCeeEEE--EccCCCceEEEEEeCCCCEEEEEECC-----CeEEEEECCCCeEEEEcccC---CC
Q 044075 697 ------DSVRVWSLASGECIHE--LSSSGNKFHSCIFHPSYPTLMVIGGY-----QSLELWNMAENKCMTIAAHD---CV 760 (786)
Q Consensus 697 ------D~I~vwDl~s~~~i~~--l~~~~~~I~sv~fspdg~~L~sgs~d-----g~I~IwDl~~~~~~~~~~h~---~~ 760 (786)
+.+.+||+.+.+-... +.........+.+ ++..++.|+.+ ..|.+||+.+.+...+.... ..
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY 246 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc
Confidence 2588999987653322 1111111122222 45566666654 47999999998876554221 11
Q ss_pred eEEEEEcCCCCEEEEEeCCC
Q 044075 761 ISALAQSPVTGMVASASHDK 780 (786)
Q Consensus 761 V~slafspdg~~LaSgs~DG 780 (786)
..++.+ ++.+++.|+.++
T Consensus 247 ~~~~~~--~~~i~v~GG~~~ 264 (301)
T 2vpj_A 247 VGATVL--RGRLYAIAGYDG 264 (301)
T ss_dssp CEEEEE--TTEEEEECCBCS
T ss_pred eeEEEE--CCEEEEEcCcCC
Confidence 222222 567777777653
No 324
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.21 E-value=0.023 Score=59.34 Aligned_cols=208 Identities=12% Similarity=0.076 Sum_probs=108.0
Q ss_pred CEEEEEeC--CCcEEEEcCCCCcceeee-ecCCCCCeEEEEEecCCCeEEEEEcCC----CcEEEEeCCCCeeeEeecC-
Q 044075 564 TQLATSSF--DKTVRIWDAAKPNFCLQT-YTGHNNHVMSLDFHPKKNDLFCSCDGN----SEIRFWNLSQYSCARISKG- 635 (786)
Q Consensus 564 ~~Lasgs~--Dg~I~VWdl~s~~~~~~~-~~~h~~~V~sl~~sp~g~~ll~sgs~D----g~I~iwDl~~~~~~~~~~~- 635 (786)
.+++.|+. ...+.+||..+.+..... +.........+. . ++.+++.|+.+ ..+.+||+.+.+-......
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF-W--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE-E--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE-E--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 35556654 356889998886642221 111112222222 2 35566677654 6788999988764433221
Q ss_pred --CeEEEEEeCCCCEEEEEECC------CeEEEEEcCCCcEEEE--EecCCCCEEEEEEcCCCCEEEEEe----------
Q 044075 636 --GTVQVRFQPRLGLLLAAASE------NVVSIFDVETDRLTHS--FKGHSTEIHSVCWDTNGEYLASVS---------- 695 (786)
Q Consensus 636 --~i~~i~~sp~g~~Ll~gs~d------g~I~iwD~~t~~~i~~--l~~h~~~I~sv~~spdg~~Lasgs---------- 695 (786)
.........++..++.|+.+ ..+.+||..+.+-... +.........+. .++++++.|+
T Consensus 90 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 90 TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEE
T ss_pred ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccc
Confidence 11111122255666676654 4689999988753332 111111112222 2566666665
Q ss_pred CCeEEEEECCCCeeEEEEccCCC-ceEEEEEeCCCCEEEEEECC-----CeEEEEECCCCeEEEEccc---CCCeEEEEE
Q 044075 696 QDSVRVWSLASGECIHELSSSGN-KFHSCIFHPSYPTLMVIGGY-----QSLELWNMAENKCMTIAAH---DCVISALAQ 766 (786)
Q Consensus 696 ~D~I~vwDl~s~~~i~~l~~~~~-~I~sv~fspdg~~L~sgs~d-----g~I~IwDl~~~~~~~~~~h---~~~V~slaf 766 (786)
.+.+.+||+.+.+-...-..... .-.+++.. ++..++.|+.+ ..+.+||+.+++...+... .....++.+
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 246 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV 246 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE
Confidence 23588999988743222111111 11222222 55556665543 4689999999877654321 112233333
Q ss_pred cCCCCEEEEEeCC
Q 044075 767 SPVTGMVASASHD 779 (786)
Q Consensus 767 spdg~~LaSgs~D 779 (786)
++.+++.|+.+
T Consensus 247 --~~~i~v~GG~~ 257 (306)
T 3ii7_A 247 --GSIVYVLAGFQ 257 (306)
T ss_dssp --TTEEEEEECBC
T ss_pred --CCEEEEEeCcC
Confidence 57788888755
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.19 E-value=0.043 Score=57.64 Aligned_cols=224 Identities=7% Similarity=0.058 Sum_probs=114.8
Q ss_pred EEEEEECCCeEEEEEcCCCeeee-ecCCCCCCeEEEEEccCCCEEEEEeC-----C------CcEEEEcCCCCcceeeee
Q 044075 523 LLASAGHDKKVVVWNMENFQTEC-TPDDHNHIITDVRFRPNSTQLATSSF-----D------KTVRIWDAAKPNFCLQTY 590 (786)
Q Consensus 523 ~Lasgs~Dg~V~IWdl~t~~~~~-~l~~h~~~V~sl~fspdg~~Lasgs~-----D------g~I~VWdl~s~~~~~~~~ 590 (786)
+++.|+ ..+.+||..+.+-.. .+..............++.+++.|+. . ..+.+||..+.+.....-
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 344454 579999988766432 22222222233333457788888874 1 127788888765322111
Q ss_pred cCCCCCeEEEEEecCCCeEEEEEcCC--------CcEEEEeCCCCeeeEeec--C-CeEEEEEeCCCCEEEEEEC-C---
Q 044075 591 TGHNNHVMSLDFHPKKNDLFCSCDGN--------SEIRFWNLSQYSCARISK--G-GTVQVRFQPRLGLLLAAAS-E--- 655 (786)
Q Consensus 591 ~~h~~~V~sl~~sp~g~~ll~sgs~D--------g~I~iwDl~~~~~~~~~~--~-~i~~i~~sp~g~~Ll~gs~-d--- 655 (786)
......-.+++.. ++.+++.|+.+ ..+.+||+.+.+-..... . .....+...++..++.|+. +
T Consensus 85 ~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 162 (315)
T 4asc_A 85 LPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRK 162 (315)
T ss_dssp BSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSC
T ss_pred CCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCc
Confidence 1111111122222 45666666632 458899998765433322 1 1111122245556666665 2
Q ss_pred --CeEEEEEcCCCcEEEE--EecCCCCEEEEEEcCCCCEEEEEeCC------eEEEEECCCCeeEEE--EccCCCceEEE
Q 044075 656 --NVVSIFDVETDRLTHS--FKGHSTEIHSVCWDTNGEYLASVSQD------SVRVWSLASGECIHE--LSSSGNKFHSC 723 (786)
Q Consensus 656 --g~I~iwD~~t~~~i~~--l~~h~~~I~sv~~spdg~~Lasgs~D------~I~vwDl~s~~~i~~--l~~~~~~I~sv 723 (786)
..+.+||..+.+-... +........++. -++++++.|+.+ .+.+||+.+.+-... +....... ++
T Consensus 163 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~ 239 (315)
T 4asc_A 163 CLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSL-SL 239 (315)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSC-EE
T ss_pred ccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccce-eE
Confidence 4689999987743221 111111112222 256677776643 488899987643322 11111112 22
Q ss_pred EEeCCCCEEEEEECC--------------CeEEEEECCCCeEEEE
Q 044075 724 IFHPSYPTLMVIGGY--------------QSLELWNMAENKCMTI 754 (786)
Q Consensus 724 ~fspdg~~L~sgs~d--------------g~I~IwDl~~~~~~~~ 754 (786)
+.. ++..++.|+.+ ..|.+||+.+.+...+
T Consensus 240 ~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 240 VSL-VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred EEE-CCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 222 55666666653 2478899998876654
No 326
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.11 E-value=0.031 Score=58.30 Aligned_cols=215 Identities=10% Similarity=0.086 Sum_probs=109.2
Q ss_pred CCEEEEEeCC----CcEEEEcCCCCcceeee-ecCCCCCeEEEEEecCCCeEEEEEcCC-----CcEEEEeCCCCeeeEe
Q 044075 563 STQLATSSFD----KTVRIWDAAKPNFCLQT-YTGHNNHVMSLDFHPKKNDLFCSCDGN-----SEIRFWNLSQYSCARI 632 (786)
Q Consensus 563 g~~Lasgs~D----g~I~VWdl~s~~~~~~~-~~~h~~~V~sl~~sp~g~~ll~sgs~D-----g~I~iwDl~~~~~~~~ 632 (786)
+.+++.|+.+ ..+.+||+.+....... +...... .+++.. ++.+++.|+.+ ..+.+||..+.+-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCR-AGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCccccc-ceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 3455555543 35788888776532211 1111111 122222 45666677644 3588999887664443
Q ss_pred ecC---CeEEEEEeCCCCEEEEEECCC-----eEEEEEcCCCcEEEE--EecCCCCEEEEEEcCCCCEEEEEeC------
Q 044075 633 SKG---GTVQVRFQPRLGLLLAAASEN-----VVSIFDVETDRLTHS--FKGHSTEIHSVCWDTNGEYLASVSQ------ 696 (786)
Q Consensus 633 ~~~---~i~~i~~sp~g~~Ll~gs~dg-----~I~iwD~~t~~~i~~--l~~h~~~I~sv~~spdg~~Lasgs~------ 696 (786)
... .....+...++..++.|+.++ .+.+||..+.+-... +.........+. .++++++.|+.
T Consensus 93 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQ 170 (302)
T ss_dssp CCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTTTE
T ss_pred CCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCc
Confidence 221 111111122556677776543 588899887753332 111111112222 25666666542
Q ss_pred --CeEEEEECCCCeeEEE--EccCCCceEEEEEeCCCCEEEEEECC-----CeEEEEECCCCeEEEEcccCC---CeEEE
Q 044075 697 --DSVRVWSLASGECIHE--LSSSGNKFHSCIFHPSYPTLMVIGGY-----QSLELWNMAENKCMTIAAHDC---VISAL 764 (786)
Q Consensus 697 --D~I~vwDl~s~~~i~~--l~~~~~~I~sv~fspdg~~L~sgs~d-----g~I~IwDl~~~~~~~~~~h~~---~V~sl 764 (786)
+.+.+||+.+.+-... +....... +++.. ++..++.|+.+ ..+.+||+.+++...+..... ....+
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 248 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGA-GVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC 248 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred cccEEEEEeCCCCcEEECCCCccccccc-cEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE
Confidence 2588999987643322 21111112 22222 55666666654 379999999987765543211 11222
Q ss_pred EEcCCCCEEEEEeCCC-----cEEEeC
Q 044075 765 AQSPVTGMVASASHDK-----SVKIWK 786 (786)
Q Consensus 765 afspdg~~LaSgs~DG-----~I~IWd 786 (786)
. .++.+++.|+.++ .|.+||
T Consensus 249 ~--~~~~i~v~GG~~~~~~~~~v~~yd 273 (302)
T 2xn4_A 249 A--VNGLLYVVGGDDGSCNLASVEYYN 273 (302)
T ss_dssp E--ETTEEEEECCBCSSSBCCCEEEEE
T ss_pred E--ECCEEEEECCcCCCcccccEEEEc
Confidence 2 2567777777654 355553
No 327
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.06 E-value=0.12 Score=54.58 Aligned_cols=177 Identities=6% Similarity=-0.003 Sum_probs=109.8
Q ss_pred EEEEcCCCCEEEEEECC--------------CeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEe--CCC--cE
Q 044075 514 CCHFSSDGKLLASAGHD--------------KKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSS--FDK--TV 575 (786)
Q Consensus 514 ~lafSpdg~~Lasgs~D--------------g~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs--~Dg--~I 575 (786)
+--++++|++|+.+... ..|+..+++..+....... .+..|+++++.|+-+. .++ .|
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~-----~~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD-----PCIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS-----CEEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC-----CccEEEEeCCEEEEEeecCCCCceE
Confidence 34457888888877543 3677777776553333221 1236777888888776 344 45
Q ss_pred EEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCeEEEEEeCCCCEEEEEECC
Q 044075 576 RIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCARISKGGTVQVRFQPRLGLLLAAASE 655 (786)
Q Consensus 576 ~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~g~~Ll~gs~d 655 (786)
..-+++... ...+..+.. ..|+++++.|+.+......|.+.++.......+..+... ..+.|++++|+....+
T Consensus 132 y~~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 132 YRIRIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp EEEETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSCEE-EEEEEETTEEEEEEGG
T ss_pred EEEECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCCcc-ceeeecCCEEEEEEcC
Confidence 555555333 334443332 346778888887776678899999988776666655443 3467999998887754
Q ss_pred --CeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC---eEEEEECCCC
Q 044075 656 --NVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD---SVRVWSLASG 707 (786)
Q Consensus 656 --g~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D---~I~vwDl~s~ 707 (786)
..|..-++...... .+. ...+ ..|+|++.+|+.++.. .|..-++...
T Consensus 205 ~~~~I~~~~ldG~~~~-~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 205 RDNAIVHVNINNPNPV-VLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp GTTEEEEECSSSCCCE-ECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcEEEEEECCCCCeE-EEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 36777777765432 232 2233 3477888888766432 6666666543
No 328
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.01 E-value=0.032 Score=58.95 Aligned_cols=195 Identities=7% Similarity=0.017 Sum_probs=115.6
Q ss_pred cCCCEEEEEeC--CCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCC-------------CcEEEEeCC
Q 044075 561 PNSTQLATSSF--DKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGN-------------SEIRFWNLS 625 (786)
Q Consensus 561 pdg~~Lasgs~--Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~D-------------g~I~iwDl~ 625 (786)
.++..|+.... ++.|...+.+... ...+.. -.+--++++++.++.+...+ ..|+..++.
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~--~~~l~~----~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN--IHKLSN----DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS--CEEEEE----EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC--CEEccC----CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 45666666542 4555555554333 222222 12344578888888776654 467888888
Q ss_pred CCeeeEeecCCeEEEEEeCCCCEEEEEE----CCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC--eE
Q 044075 626 QYSCARISKGGTVQVRFQPRLGLLLAAA----SENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD--SV 699 (786)
Q Consensus 626 ~~~~~~~~~~~i~~i~~sp~g~~Ll~gs----~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D--~I 699 (786)
..+......... ..|++++++|+... ....|+..++...... .+..+.. ..|+++++.|+-.+.+ .|
T Consensus 97 g~~~~~l~~~~~--~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~-~lt~~~~----~~~~~~g~~iy~t~~g~~~I 169 (302)
T 3s25_A 97 GHGSTVLDPDPC--IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK-KIKNHYL----FTCNTSDRYFYYNNPKNGQL 169 (302)
T ss_dssp SCCCEEEECSCE--EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE-EEESSCC----CCSEEETTEEEEECTTTCCE
T ss_pred CCcceEeecCCc--cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE-EEeCCCc----eEeeEECCEEEEEeCCCceE
Confidence 766554444433 36778888888876 2456777777754433 3333322 3467788888877764 89
Q ss_pred EEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCC--eEEEEECCCCeEEEEcccCCCeEEEEEcCCCCEEEEE
Q 044075 700 RVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ--SLELWNMAENKCMTIAAHDCVISALAQSPVTGMVASA 776 (786)
Q Consensus 700 ~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg--~I~IwDl~~~~~~~~~~h~~~V~slafspdg~~LaSg 776 (786)
.+.++..+.....+. +... ..++|++.+|+.....+ .|..-++.......+... .+ ..|+|++.+|+-+
T Consensus 170 y~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~--~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 170 YRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEA--NI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp EEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCS--CE--EEEEEETTEEEEE
T ss_pred EEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCC--Cc--ceEEECCCEEEEE
Confidence 999988765443332 2222 34669999988877543 677777776655444322 22 2355556655544
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.85 E-value=0.11 Score=54.67 Aligned_cols=217 Identities=6% Similarity=0.027 Sum_probs=107.8
Q ss_pred eEEEEEcCCCeeee-ecCCCCCCeEEEEEccCCCEEEEEeC----CC-------cEEEEcCCCCcceeeeecCCCCCeEE
Q 044075 532 KVVVWNMENFQTEC-TPDDHNHIITDVRFRPNSTQLATSSF----DK-------TVRIWDAAKPNFCLQTYTGHNNHVMS 599 (786)
Q Consensus 532 ~V~IWdl~t~~~~~-~l~~h~~~V~sl~fspdg~~Lasgs~----Dg-------~I~VWdl~s~~~~~~~~~~h~~~V~s 599 (786)
.+.+||..+.+-.. .+..............++.+++.|+. ++ .+.+||..+.......-......-.+
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 47888888765433 11111112222333456778888873 12 17788887765422111111111122
Q ss_pred EEEecCCCeEEEEEcCC-------CcEEEEeCCCCeeeEeec--CCeE-EEEEeCCCCEEEEEEC------CCeEEEEEc
Q 044075 600 LDFHPKKNDLFCSCDGN-------SEIRFWNLSQYSCARISK--GGTV-QVRFQPRLGLLLAAAS------ENVVSIFDV 663 (786)
Q Consensus 600 l~~sp~g~~ll~sgs~D-------g~I~iwDl~~~~~~~~~~--~~i~-~i~~sp~g~~Ll~gs~------dg~I~iwD~ 663 (786)
++.. ++.+++.|+.+ ..+.+||+.+.+-..... .... ..+...++..++.|+. -..+.+||.
T Consensus 105 ~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 105 LGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp EEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEET
T ss_pred eEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcC
Confidence 2222 34566666543 357888988765444322 1111 1112245556666653 246999999
Q ss_pred CCCcEEEE--EecCCCCEEEEEEcCCCCEEEEEeCC------eEEEEECCCCeeEE--EEccCCCceEEEEEeCCCCEEE
Q 044075 664 ETDRLTHS--FKGHSTEIHSVCWDTNGEYLASVSQD------SVRVWSLASGECIH--ELSSSGNKFHSCIFHPSYPTLM 733 (786)
Q Consensus 664 ~t~~~i~~--l~~h~~~I~sv~~spdg~~Lasgs~D------~I~vwDl~s~~~i~--~l~~~~~~I~sv~fspdg~~L~ 733 (786)
.+.+-... +........++. -++++++.|+.+ .+.+||+.+.+-.. .+....... +++. -++..++
T Consensus 183 ~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~i~v 258 (318)
T 2woz_A 183 KKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI-SLVS-LAGSLYA 258 (318)
T ss_dssp TTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC-EEEE-ETTEEEE
T ss_pred CCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce-EEEE-ECCEEEE
Confidence 88743322 111111112222 256666666532 47789988764222 111111111 2222 2455666
Q ss_pred EEECC--------------CeEEEEECCCCeEEEE
Q 044075 734 VIGGY--------------QSLELWNMAENKCMTI 754 (786)
Q Consensus 734 sgs~d--------------g~I~IwDl~~~~~~~~ 754 (786)
.|+.+ ..|.+||+.+.+...+
T Consensus 259 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 259 IGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp ECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred ECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 66543 3688999998876654
No 330
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.81 E-value=0.07 Score=58.54 Aligned_cols=128 Identities=18% Similarity=0.257 Sum_probs=89.2
Q ss_pred CeEEEEEcCCCcEEEEEecC----CCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCe------------eEEEEcc----
Q 044075 656 NVVSIFDVETDRLTHSFKGH----STEIHSVCWDTNGEYLASVSQDSVRVWSLASGE------------CIHELSS---- 715 (786)
Q Consensus 656 g~I~iwD~~t~~~i~~l~~h----~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~------------~i~~l~~---- 715 (786)
+.|+.-++......+.+... -..|..+..+|+|++||..+...|.|..+..+. ..+.+..
T Consensus 41 n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~ 120 (452)
T 3pbp_A 41 NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEE 120 (452)
T ss_dssp TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC
T ss_pred CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcc
Confidence 66776666644334444322 235788999999999999988899998887321 1223322
Q ss_pred --CCCceEEEEEeCC---CCEEEEEECCCeEEEEECCCCe--EE---------EEcccCCCeEEEEEcCCCCEEEEEe--
Q 044075 716 --SGNKFHSCIFHPS---YPTLMVIGGYQSLELWNMAENK--CM---------TIAAHDCVISALAQSPVTGMVASAS-- 777 (786)
Q Consensus 716 --~~~~I~sv~fspd---g~~L~sgs~dg~I~IwDl~~~~--~~---------~~~~h~~~V~slafspdg~~LaSgs-- 777 (786)
...+|..+.|||- +..|++-..|+.|++||+.... .. ........|.+++|..++-.|+..+
T Consensus 121 ~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t 200 (452)
T 3pbp_A 121 VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTT 200 (452)
T ss_dssp --CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECT
T ss_pred cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecC
Confidence 2467999999995 4689999999999999998621 11 1122346799999999877666655
Q ss_pred CCCcEE
Q 044075 778 HDKSVK 783 (786)
Q Consensus 778 ~DG~I~ 783 (786)
.+|.|.
T Consensus 201 ~~GDIY 206 (452)
T 3pbp_A 201 EGGDIF 206 (452)
T ss_dssp TSCEEE
T ss_pred CCCCEE
Confidence 778775
No 331
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.77 E-value=0.074 Score=55.81 Aligned_cols=205 Identities=11% Similarity=0.065 Sum_probs=104.5
Q ss_pred EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcC-----C------CcEEEEeCCCCeeeEee
Q 044075 565 QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDG-----N------SEIRFWNLSQYSCARIS 633 (786)
Q Consensus 565 ~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~-----D------g~I~iwDl~~~~~~~~~ 633 (786)
+++.|+ ..+.+||..+.+.....+.............. ++.+++.|+. . ..+.+||..+.+-....
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTK-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECT-TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEE-CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 344555 56999999988754433322212222222233 3445555552 1 12778898876643322
Q ss_pred c--CCe--EEEEEeCCCCEEEEEECC--------CeEEEEEcCCCcEEEE--EecCCCCEEEEEEcCCCCEEEEEeC---
Q 044075 634 K--GGT--VQVRFQPRLGLLLAAASE--------NVVSIFDVETDRLTHS--FKGHSTEIHSVCWDTNGEYLASVSQ--- 696 (786)
Q Consensus 634 ~--~~i--~~i~~sp~g~~Ll~gs~d--------g~I~iwD~~t~~~i~~--l~~h~~~I~sv~~spdg~~Lasgs~--- 696 (786)
. ... ..++. -++..++.|+.+ ..+.+||..+.+-... +....... +++. .++++++.|+.
T Consensus 84 ~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 84 PLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLS-HMDLVYVIGGKGSD 160 (315)
T ss_dssp CBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBCTT
T ss_pred CCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEE-ECCEEEEEeCCCCC
Confidence 2 111 11122 245556666532 4689999988743221 11111111 2222 45666677664
Q ss_pred ----CeEEEEECCCCeeEE--EEccCCCceEEEEEeCCCCEEEEEECCC-----eEEEEECCCCeEEEEcccC---CCeE
Q 044075 697 ----DSVRVWSLASGECIH--ELSSSGNKFHSCIFHPSYPTLMVIGGYQ-----SLELWNMAENKCMTIAAHD---CVIS 762 (786)
Q Consensus 697 ----D~I~vwDl~s~~~i~--~l~~~~~~I~sv~fspdg~~L~sgs~dg-----~I~IwDl~~~~~~~~~~h~---~~V~ 762 (786)
+.+.+||+.+.+-.. .+...... .+++.. ++..++.|+.++ .+.+||+.+.+...+.... ....
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 238 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSL-FGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLS 238 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCE
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhc-eEEEEE-CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccccee
Confidence 258999998764222 11111111 122222 566777777554 6899999998776554221 1122
Q ss_pred EEEEcCCCCEEEEEeCC
Q 044075 763 ALAQSPVTGMVASASHD 779 (786)
Q Consensus 763 slafspdg~~LaSgs~D 779 (786)
.+.+ ++.+++.|+.+
T Consensus 239 ~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 239 LVSL--VGTLYAIGGFA 253 (315)
T ss_dssp EEEE--TTEEEEEEEEE
T ss_pred EEEE--CCEEEEECCcc
Confidence 2222 56777777764
No 332
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.74 E-value=0.51 Score=52.60 Aligned_cols=103 Identities=10% Similarity=0.091 Sum_probs=61.3
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcce-eeeecC------CCCCeEEEEEecC---CCeEEEEEcC------
Q 044075 552 HIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFC-LQTYTG------HNNHVMSLDFHPK---KNDLFCSCDG------ 615 (786)
Q Consensus 552 ~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~-~~~~~~------h~~~V~sl~~sp~---g~~ll~sgs~------ 615 (786)
...+.|+|.|+++++++-...+.|++++..++... +..+.. ....+..|+|+|+ +..++++.+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 35679999999986666443347888876544321 112211 2356779999996 6666655542
Q ss_pred ------CCcEEEEeCCCC-------eee-Eeec----CCeEEEEEeCCCCEEEEEEC
Q 044075 616 ------NSEIRFWNLSQY-------SCA-RISK----GGTVQVRFQPRLGLLLAAAS 654 (786)
Q Consensus 616 ------Dg~I~iwDl~~~-------~~~-~~~~----~~i~~i~~sp~g~~Ll~gs~ 654 (786)
...|.-|++... +.+ .... .....++|.++|.++++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235655655321 111 1111 23577999999987776553
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.67 E-value=0.043 Score=58.68 Aligned_cols=227 Identities=9% Similarity=-0.002 Sum_probs=111.7
Q ss_pred CCCEEEEEECC-CeEEEEEcCC----CeeeeecC-CCCCCeEEEEEccCCCEEEEEeC-C---------CcEEEEcCCCC
Q 044075 520 DGKLLASAGHD-KKVVVWNMEN----FQTECTPD-DHNHIITDVRFRPNSTQLATSSF-D---------KTVRIWDAAKP 583 (786)
Q Consensus 520 dg~~Lasgs~D-g~V~IWdl~t----~~~~~~l~-~h~~~V~sl~fspdg~~Lasgs~-D---------g~I~VWdl~s~ 583 (786)
++++++.|+.+ ..+.+||+.+ ...+..+. .....-.++.+ ++.+++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 56666777643 4688999863 22222222 11112222222 5667777765 2 46889999886
Q ss_pred cceeeeecC-CCCCeEEEEEecCCCeEEEEEcCC---------------------------------------CcEEEEe
Q 044075 584 NFCLQTYTG-HNNHVMSLDFHPKKNDLFCSCDGN---------------------------------------SEIRFWN 623 (786)
Q Consensus 584 ~~~~~~~~~-h~~~V~sl~~sp~g~~ll~sgs~D---------------------------------------g~I~iwD 623 (786)
......... ....-.+++. . ++.+++.|+.+ ..+.+||
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 174 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV-H-NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFD 174 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE-E-TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEE
T ss_pred cEEECCCCCCcccccceEEE-E-CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEe
Confidence 643221111 1111122222 2 35566677644 5789999
Q ss_pred CCCCeeeEeec--C--Ce-EEEEEeCCCCEEEEEEC------CCeEEEEEc--CCCcEEEEEec---CCCCEEEEEEcCC
Q 044075 624 LSQYSCARISK--G--GT-VQVRFQPRLGLLLAAAS------ENVVSIFDV--ETDRLTHSFKG---HSTEIHSVCWDTN 687 (786)
Q Consensus 624 l~~~~~~~~~~--~--~i-~~i~~sp~g~~Ll~gs~------dg~I~iwD~--~t~~~i~~l~~---h~~~I~sv~~spd 687 (786)
+.+.+-..... . .. ..++. .++..++.|+. ...+.+||+ .+.+-. .+.. ........+...+
T Consensus 175 ~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~-~~~~~~~~~~~~~~~~~~~~ 252 (357)
T 2uvk_A 175 PSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWN-KLAPVSSPDGVAGGFAGISN 252 (357)
T ss_dssp TTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEE-ECCCSSTTTCCBSCEEEEET
T ss_pred CCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEE-ecCCCCCCcccccceEEEEC
Confidence 98765443322 1 11 22222 24555556543 345778887 433221 1111 1111111122235
Q ss_pred CCEEEEEeC-----------------------CeEEEEECCCCe--eEEEEccCCCceEEEEEeCCCCEEEEEECCC---
Q 044075 688 GEYLASVSQ-----------------------DSVRVWSLASGE--CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQ--- 739 (786)
Q Consensus 688 g~~Lasgs~-----------------------D~I~vwDl~s~~--~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg--- 739 (786)
+++++.|+. ..+.+||+.+.+ .+..+........+ +..+++.++.|+.++
T Consensus 253 ~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~~~ 330 (357)
T 2uvk_A 253 DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIGGETAGGK 330 (357)
T ss_dssp TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEEEECGGGC
T ss_pred CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEeeeCCCCC
Confidence 666666652 147789988653 44443332222222 334667778888653
Q ss_pred ---eEEEEECCCCeEEEE
Q 044075 740 ---SLELWNMAENKCMTI 754 (786)
Q Consensus 740 ---~I~IwDl~~~~~~~~ 754 (786)
.|.++++++++.+..
T Consensus 331 ~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 331 AVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEEEEEEEEC-CCSCEEE
T ss_pred EeeeEEEEEEcCcEeEee
Confidence 467779988887643
No 334
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.50 E-value=1.2 Score=49.67 Aligned_cols=106 Identities=13% Similarity=0.155 Sum_probs=62.3
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeee--eecCC------CCCCeEEEEEccC---CCEEEEEeC------
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTE--CTPDD------HNHIITDVRFRPN---STQLATSSF------ 571 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~--~~l~~------h~~~V~sl~fspd---g~~Lasgs~------ 571 (786)
-...+.|+|.|+|+++++-...+.|++++..+++.. ..+.. ....+..|+|+|+ +..|+++..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 346789999999997776543357888876554432 22221 2456789999995 555554432
Q ss_pred -------CCcEEEEcCCCCc-------ceeeeec-CCCCCeEEEEEecCCCeEEEEEc
Q 044075 572 -------DKTVRIWDAAKPN-------FCLQTYT-GHNNHVMSLDFHPKKNDLFCSCD 614 (786)
Q Consensus 572 -------Dg~I~VWdl~s~~-------~~~~~~~-~h~~~V~sl~~sp~g~~ll~sgs 614 (786)
...|.-|++.... .++..+. ........|+|.|++..++..++
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 1345555543221 1111122 11234789999999976665443
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.47 E-value=0.15 Score=53.47 Aligned_cols=205 Identities=12% Similarity=0.112 Sum_probs=102.0
Q ss_pred EEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcC----CC-------cEEEEeCCCCeeeEee
Q 044075 565 QLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDG----NS-------EIRFWNLSQYSCARIS 633 (786)
Q Consensus 565 ~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~----Dg-------~I~iwDl~~~~~~~~~ 633 (786)
+++.|+. .+.+||..+.+................... .++.+++.|+. ++ .+.+||..+.+-....
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVT-QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEEC-SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEE-ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 3444443 488999988775442222111111222222 34556666662 12 1778888876544332
Q ss_pred c--CC--eEEEEEeCCCCEEEEEECC-------CeEEEEEcCCCcEEEEEecCCCCE--EEEEEcCCCCEEEEEeC----
Q 044075 634 K--GG--TVQVRFQPRLGLLLAAASE-------NVVSIFDVETDRLTHSFKGHSTEI--HSVCWDTNGEYLASVSQ---- 696 (786)
Q Consensus 634 ~--~~--i~~i~~sp~g~~Ll~gs~d-------g~I~iwD~~t~~~i~~l~~h~~~I--~sv~~spdg~~Lasgs~---- 696 (786)
. .. ...++. .++..++.|+.+ ..+.+||..+.+-... .....+. .+++. .++++++.|+.
T Consensus 95 ~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 95 PLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEV-KNLPIKVYGHNVIS-HNGMIYCLGGKTDDK 171 (318)
T ss_dssp CBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEE-CCCSSCEESCEEEE-ETTEEEEECCEESSS
T ss_pred CCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeEC-CCCCCcccccEEEE-ECCEEEEEcCCCCCC
Confidence 1 11 111222 255666677653 3588899987643322 1111111 11222 46666666653
Q ss_pred ---CeEEEEECCCCeeEEE--EccCCCceEEEEEeCCCCEEEEEECC-----CeEEEEECCCCeEEEEcccCC---CeEE
Q 044075 697 ---DSVRVWSLASGECIHE--LSSSGNKFHSCIFHPSYPTLMVIGGY-----QSLELWNMAENKCMTIAAHDC---VISA 763 (786)
Q Consensus 697 ---D~I~vwDl~s~~~i~~--l~~~~~~I~sv~fspdg~~L~sgs~d-----g~I~IwDl~~~~~~~~~~h~~---~V~s 763 (786)
+.+.+||+.+.+-... +...... .+++.. ++..++.|+.+ ..+.+||+.+.+...+..... ....
T Consensus 172 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 249 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWKDLAPMKTPRSM-FGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISL 249 (318)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEE
T ss_pred CccceEEEEcCCCCEEEECCCCCCCccc-ceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEE
Confidence 1589999988653222 1111111 222222 55666666643 368899999887665432211 1122
Q ss_pred EEEcCCCCEEEEEeCC
Q 044075 764 LAQSPVTGMVASASHD 779 (786)
Q Consensus 764 lafspdg~~LaSgs~D 779 (786)
+. .++.+++.|+.+
T Consensus 250 ~~--~~~~i~v~GG~~ 263 (318)
T 2woz_A 250 VS--LAGSLYAIGGFA 263 (318)
T ss_dssp EE--ETTEEEEECCBC
T ss_pred EE--ECCEEEEECCee
Confidence 22 246677777654
No 336
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.37 E-value=0.097 Score=54.75 Aligned_cols=181 Identities=15% Similarity=0.114 Sum_probs=94.9
Q ss_pred CCCEEEEEEC----C-----CeEEEEEcCCCeeeee--cCCCCCCeEEEEEccCCCEEEEEeCC-----CcEEEEcCCCC
Q 044075 520 DGKLLASAGH----D-----KKVVVWNMENFQTECT--PDDHNHIITDVRFRPNSTQLATSSFD-----KTVRIWDAAKP 583 (786)
Q Consensus 520 dg~~Lasgs~----D-----g~V~IWdl~t~~~~~~--l~~h~~~V~sl~fspdg~~Lasgs~D-----g~I~VWdl~s~ 583 (786)
++.+++.|+. + ..+.+||..+.+-... +.........+.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5667777765 2 4688899877543322 2211122222333 56677777643 35888998876
Q ss_pred cceeee-ecCCCCCeEEEEEecCCCeEEEEEcCC-----CcEEEEeCCCCeeeEeecC---C-eEEEEEeCCCCEEEEEE
Q 044075 584 NFCLQT-YTGHNNHVMSLDFHPKKNDLFCSCDGN-----SEIRFWNLSQYSCARISKG---G-TVQVRFQPRLGLLLAAA 653 (786)
Q Consensus 584 ~~~~~~-~~~h~~~V~sl~~sp~g~~ll~sgs~D-----g~I~iwDl~~~~~~~~~~~---~-i~~i~~sp~g~~Ll~gs 653 (786)
...... +........++.+ ++.+++.|+.+ ..+.+||+.+.+-...... . ...++. -++..++.|+
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG 223 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV-LHNCIYAAGG 223 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECC
T ss_pred eEeECCCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE-ECCEEEEEeC
Confidence 542221 1111112222222 35666676644 4688999987654433221 1 111222 2556666666
Q ss_pred CC-----CeEEEEEcCCCcEEEE--EecCCCCEEEEEEcCCCCEEEEEeCC------eEEEEECCCCe
Q 044075 654 SE-----NVVSIFDVETDRLTHS--FKGHSTEIHSVCWDTNGEYLASVSQD------SVRVWSLASGE 708 (786)
Q Consensus 654 ~d-----g~I~iwD~~t~~~i~~--l~~h~~~I~sv~~spdg~~Lasgs~D------~I~vwDl~s~~ 708 (786)
.+ ..+.+||+.+.+-... +.........+. -++++++.|+.+ .|.+||+.+.+
T Consensus 224 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp BCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 54 5699999988743321 111111122222 256666666532 57888887764
No 337
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.35 E-value=0.32 Score=54.97 Aligned_cols=253 Identities=13% Similarity=0.106 Sum_probs=142.0
Q ss_pred EEEEECCCeEEEEEcCCCeeeeecCCC-------------------------CCCe--EEEEEcc---CCCEEEEEeC-C
Q 044075 524 LASAGHDKKVVVWNMENFQTECTPDDH-------------------------NHII--TDVRFRP---NSTQLATSSF-D 572 (786)
Q Consensus 524 Lasgs~Dg~V~IWdl~t~~~~~~l~~h-------------------------~~~V--~sl~fsp---dg~~Lasgs~-D 572 (786)
|.+|+..|.|+|+-+.+.+.+..+.-. .+.. ..+++.. ||++|+.-.. +
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 678888999999999888777655210 0111 1233432 5677777664 5
Q ss_pred CcEEEEcCCCCcceeeeecCCCCCeEEEEEe--cCCCeEEEEEc------CCCcEE---------E---EeCCCCeeeEe
Q 044075 573 KTVRIWDAAKPNFCLQTYTGHNNHVMSLDFH--PKKNDLFCSCD------GNSEIR---------F---WNLSQYSCARI 632 (786)
Q Consensus 573 g~I~VWdl~s~~~~~~~~~~h~~~V~sl~~s--p~g~~ll~sgs------~Dg~I~---------i---wDl~~~~~~~~ 632 (786)
..|-..+++.-+............+..+.|- |+..++|+.+- .||... + .|..+.+....
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~Q 232 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAFQ 232 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEEE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEEE
Confidence 6677777777653222333455678888886 67777775542 233321 1 12222111110
Q ss_pred --ecCCeEEEEEeCCCCEEEEEECCC---------------eEEEEEcCC-------C-----c--EEEEEec-------
Q 044075 633 --SKGGTVQVRFQPRLGLLLAAASEN---------------VVSIFDVET-------D-----R--LTHSFKG------- 674 (786)
Q Consensus 633 --~~~~i~~i~~sp~g~~Ll~gs~dg---------------~I~iwD~~t-------~-----~--~i~~l~~------- 674 (786)
..+....+...+++++.++.+.+. .+.++++.. + . -+..+.+
T Consensus 233 v~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~~ 312 (638)
T 3sbq_A 233 VIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGKD 312 (638)
T ss_dssp EEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTBC
T ss_pred EEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccccccccC
Confidence 112223344566777777766532 245554320 0 0 0111211
Q ss_pred --------CCCCEEEEEEcCCCCEEEEEeCC--eEEEEECCCC------e-------eEEEEccCCCceEEEEEeCCCCE
Q 044075 675 --------HSTEIHSVCWDTNGEYLASVSQD--SVRVWSLASG------E-------CIHELSSSGNKFHSCIFHPSYPT 731 (786)
Q Consensus 675 --------h~~~I~sv~~spdg~~Lasgs~D--~I~vwDl~s~------~-------~i~~l~~~~~~I~sv~fspdg~~ 731 (786)
-......+.++|||+|+++++.- ++.|+|++.- + .+.... ..-.....+|.++|..
T Consensus 313 ~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~a 391 (638)
T 3sbq_A 313 SKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNA 391 (638)
T ss_dssp CSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEE
T ss_pred CceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCce
Confidence 12334568889999999988865 8999998841 1 122332 3445677899999954
Q ss_pred EEEEECCCeEEEEECCCC----------eEE-EEcccCCCeEEEEE------cCCCCEEEEEeC
Q 044075 732 LMVIGGYQSLELWNMAEN----------KCM-TIAAHDCVISALAQ------SPVTGMVASASH 778 (786)
Q Consensus 732 L~sgs~dg~I~IwDl~~~----------~~~-~~~~h~~~V~slaf------spdg~~LaSgs~ 778 (786)
..+.--|..|.-|++... ..+ ++.-|- .+-.+.- .+||++|++...
T Consensus 392 YTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Y-qpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 392 YTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHY-QPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSS-CEEEEEETTTTSTTCCSCEEEEEES
T ss_pred EeeeeecceEEEEeccHHHHHhcCccCCeeeecccccc-CCcccccCCCccCCCCccEEEEecc
Confidence 455557899999998753 233 232232 2333333 578888888653
No 338
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.33 E-value=0.19 Score=62.76 Aligned_cols=212 Identities=10% Similarity=0.230 Sum_probs=126.6
Q ss_pred CCeEEEEEcCCCeeeeec-CCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCe
Q 044075 530 DKKVVVWNMENFQTECTP-DDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKND 608 (786)
Q Consensus 530 Dg~V~IWdl~t~~~~~~l-~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ 608 (786)
...|.|.|+.+...+.+- ..- -+.-.+|..+.|+.-. ..++.|||+++... +..+.- ...|.-=.|......
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~A----dsAIMnP~~~iiALra-g~~lQiFnl~~k~k-lks~~~-~e~VvfWkWis~~~l 119 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSK-MKAHTM-TDDVTFWKWISLNTV 119 (1630)
T ss_pred CceEEEEECCCCCCcccccccc----hhhccCCCcceEEEec-CCeEEEeehHHhhh-hccccc-CCCceEEEecCCCee
Confidence 447999999876544221 111 2334677777666654 68899999988663 333332 345655566544332
Q ss_pred EEEEEcCCCcEEEEeCCCC-eeeEee-------cCCeEEEEEeCCCCEEEEEEC-------CCeEEEEEcCCCcEEEEEe
Q 044075 609 LFCSCDGNSEIRFWNLSQY-SCARIS-------KGGTVQVRFQPRLGLLLAAAS-------ENVVSIFDVETDRLTHSFK 673 (786)
Q Consensus 609 ll~sgs~Dg~I~iwDl~~~-~~~~~~-------~~~i~~i~~sp~g~~Ll~gs~-------dg~I~iwD~~t~~~i~~l~ 673 (786)
-++| +..|+.|++... .+.+.+ ...|.....+++.++++..+- .|.+.+|.++.+ ....+.
T Consensus 120 ~lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~ie 195 (1630)
T 1xi4_A 120 ALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE 195 (1630)
T ss_pred EEEc---CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhh
Confidence 2323 568999999642 222222 244566677888888776553 478888888754 333455
Q ss_pred cCCCCEEEEEEcC---CCCEEEEEeC----CeEEEEECCCC---e------eEEEEccC---CCceEEEEEeCCCCEEEE
Q 044075 674 GHSTEIHSVCWDT---NGEYLASVSQ----DSVRVWSLASG---E------CIHELSSS---GNKFHSCIFHPSYPTLMV 734 (786)
Q Consensus 674 ~h~~~I~sv~~sp---dg~~Lasgs~----D~I~vwDl~s~---~------~i~~l~~~---~~~I~sv~fspdg~~L~s 734 (786)
||......+.... ...+++.+.. ..+.|.++... . .+..+... .+-..++..++....++.
T Consensus 196 gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~ 275 (1630)
T 1xi4_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (1630)
T ss_pred HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEE
Confidence 5655443333321 1223333332 27888887542 1 11111111 223456778888889999
Q ss_pred EECCCeEEEEECCCCeEE
Q 044075 735 IGGYQSLELWNMAENKCM 752 (786)
Q Consensus 735 gs~dg~I~IwDl~~~~~~ 752 (786)
.+..|.|++||+.++.++
T Consensus 276 itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 276 ITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred EecCceEEEEecccchhh
Confidence 999999999999999876
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.29 E-value=0.19 Score=53.83 Aligned_cols=186 Identities=8% Similarity=0.011 Sum_probs=101.8
Q ss_pred CEEEEEeCCCcEEEEcCCCCcceeeeecCC-CCCeEEEEE--ecCCCeEEEEE-cCCCcEEEEeCCCCeeeEeec--C--
Q 044075 564 TQLATSSFDKTVRIWDAAKPNFCLQTYTGH-NNHVMSLDF--HPKKNDLFCSC-DGNSEIRFWNLSQYSCARISK--G-- 635 (786)
Q Consensus 564 ~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h-~~~V~sl~~--sp~g~~ll~sg-s~Dg~I~iwDl~~~~~~~~~~--~-- 635 (786)
..+++++.||.|.-+|..+++. ...+... ..++....- .+.+..+++.. ..||.|..++..++....... .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~-~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHI-IWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEE-EEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcE-EEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 4788899999999999988773 3333322 122222110 01123444443 679999999988775443222 0
Q ss_pred CeEEEEEe-----------CCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCC-------CEEEEEEc-----CCCCEEE
Q 044075 636 GTVQVRFQ-----------PRLGLLLAAASENVVSIFDVETDRLTHSFKGHST-------EIHSVCWD-----TNGEYLA 692 (786)
Q Consensus 636 ~i~~i~~s-----------p~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~-------~I~sv~~s-----pdg~~La 692 (786)
....+... ..+..+++++.++.++..|+++|+.+..+..... ...|.... ..+..|+
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 00001111 1567889999999999999999999998874211 01111111 1235677
Q ss_pred EEeCC-eEEEEECCCCeeEEEE-----ccCCCc--eE-EEEEeCCCCEEEEEECCCeEEEEECCCCeEEE
Q 044075 693 SVSQD-SVRVWSLASGECIHEL-----SSSGNK--FH-SCIFHPSYPTLMVIGGYQSLELWNMAENKCMT 753 (786)
Q Consensus 693 sgs~D-~I~vwDl~s~~~i~~l-----~~~~~~--I~-sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~~ 753 (786)
.+..+ .+.+.+ ++++ +..+ ...... +. .-.++.++.+ ++++.||.|..+|..++..+-
T Consensus 170 ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 170 IGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 77666 676666 4443 2111 110000 00 0001123454 557888888888888777654
No 340
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.07 E-value=0.24 Score=52.76 Aligned_cols=187 Identities=9% Similarity=0.018 Sum_probs=93.5
Q ss_pred CCCEEEEEEC-C---------CeEEEEEcCCCeeeeec--C-CCCCCeEEEEEccCCCEEEEEeCC--------------
Q 044075 520 DGKLLASAGH-D---------KKVVVWNMENFQTECTP--D-DHNHIITDVRFRPNSTQLATSSFD-------------- 572 (786)
Q Consensus 520 dg~~Lasgs~-D---------g~V~IWdl~t~~~~~~l--~-~h~~~V~sl~fspdg~~Lasgs~D-------------- 572 (786)
++++++.|+. + ..+.+||..+.+-.... . .......++. .++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhc
Confidence 5667777765 2 46889998875433222 1 1111222222 467788888765
Q ss_pred -------------------------CcEEEEcCCCCcceeeeecCCCCCe-EEEEEecCCCeEEEEEcC------CCcEE
Q 044075 573 -------------------------KTVRIWDAAKPNFCLQTYTGHNNHV-MSLDFHPKKNDLFCSCDG------NSEIR 620 (786)
Q Consensus 573 -------------------------g~I~VWdl~s~~~~~~~~~~h~~~V-~sl~~sp~g~~ll~sgs~------Dg~I~ 620 (786)
..+.+||+.+.......-....... .+++.. ++.+++.|+. ...+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~ 220 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVF 220 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEE
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceE
Confidence 4688999988764332211111111 233333 3556666653 34577
Q ss_pred EEeC--CCCeeeEeec-----CCeEEEEEeCCCCEEEEEECC----------------------CeEEEEEcCCCc--EE
Q 044075 621 FWNL--SQYSCARISK-----GGTVQVRFQPRLGLLLAAASE----------------------NVVSIFDVETDR--LT 669 (786)
Q Consensus 621 iwDl--~~~~~~~~~~-----~~i~~i~~sp~g~~Ll~gs~d----------------------g~I~iwD~~t~~--~i 669 (786)
+||+ .+.+-..... ......+...++..++.|+.+ ..+.+||+++.+ .+
T Consensus 221 ~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~ 300 (357)
T 2uvk_A 221 ELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS 300 (357)
T ss_dssp EEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEE
T ss_pred EEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeC
Confidence 7887 4433322211 111112233355666666532 257889988763 33
Q ss_pred EEEecCCCCEEEEEEcCCCCEEEEEeCC-------eEEEEECCCCeeEEE
Q 044075 670 HSFKGHSTEIHSVCWDTNGEYLASVSQD-------SVRVWSLASGECIHE 712 (786)
Q Consensus 670 ~~l~~h~~~I~sv~~spdg~~Lasgs~D-------~I~vwDl~s~~~i~~ 712 (786)
..+......-.++ ..++++++.|+.+ .|.++++++++.+..
T Consensus 301 ~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 301 GELSQGRAYGVSL--PWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EECSSCCBSSEEE--EETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred CCCCCCcccceeE--EeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 3333222222222 3467777777743 256668887765543
No 341
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.05 E-value=0.28 Score=53.77 Aligned_cols=143 Identities=11% Similarity=0.062 Sum_probs=94.7
Q ss_pred EcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCC----CCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc-------
Q 044075 517 FSSDGKLLASAGHDKKVVVWNMENFQTECTPDDH----NHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF------- 585 (786)
Q Consensus 517 fSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h----~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~------- 585 (786)
.+.+|..|+++ .++.||.-++.+....+.+... -..|..+..+|+|++||..+ +..|.|-.+..+..
T Consensus 28 ~~~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 28 SSQNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp EETTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHH
T ss_pred EEcCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccc
Confidence 34466666666 3688998888754444443322 23688899999999999887 46788888763220
Q ss_pred ----eeeeecC------CCCCeEEEEEecCCCe--EEEEEcCCCcEEEEeCCCCe--ee------Eeec-----CCeEEE
Q 044075 586 ----CLQTYTG------HNNHVMSLDFHPKKND--LFCSCDGNSEIRFWNLSQYS--CA------RISK-----GGTVQV 640 (786)
Q Consensus 586 ----~~~~~~~------h~~~V~sl~~sp~g~~--ll~sgs~Dg~I~iwDl~~~~--~~------~~~~-----~~i~~i 640 (786)
..+.+.- ...+|..+.|||-+.. .+++-..|+.|++||+.... .. ..+. ..+.++
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEE
Confidence 0112211 2567999999997643 45567779999999998521 11 1111 457789
Q ss_pred EEeCCCCEEEEEE--CCCeEEEE
Q 044075 641 RFQPRLGLLLAAA--SENVVSIF 661 (786)
Q Consensus 641 ~~sp~g~~Ll~gs--~dg~I~iw 661 (786)
+|..++-.|++.+ .+|.|+-+
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEEEE
T ss_pred EEcCCCcEEEEEecCCCCCEEEE
Confidence 9999887788866 77888754
No 342
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.99 E-value=0.18 Score=62.92 Aligned_cols=233 Identities=12% Similarity=0.163 Sum_probs=141.1
Q ss_pred EEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCC-
Q 044075 515 CHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGH- 593 (786)
Q Consensus 515 lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h- 593 (786)
.-.+|..+.||.=. ..++.|+|+++...+..+.-.. .|.-=.|..+.. |+..+ +..|.-|++.....+.+.+..|
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCCCe-eEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 33566666666543 6789999999887777765544 566667765443 44333 4579999997655566666655
Q ss_pred ---CCCeEEEEEecCCCeEEEEEc------CCCcEEEEeCCCCeeeEeecCCeEE---EEE--eCCCCEEEEEEC----C
Q 044075 594 ---NNHVMSLDFHPKKNDLFCSCD------GNSEIRFWNLSQYSCARISKGGTVQ---VRF--QPRLGLLLAAAS----E 655 (786)
Q Consensus 594 ---~~~V~sl~~sp~g~~ll~sgs------~Dg~I~iwDl~~~~~~~~~~~~i~~---i~~--sp~g~~Ll~gs~----d 655 (786)
...|..-..+++.+.++++|- -.|.+.+|+++....- .+.++..+ +.. .+....+++-.. .
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ-~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g 225 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch-hhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence 456777778888888877663 3478888888754321 11221111 111 111122333222 2
Q ss_pred CeEEEEEcCCC---cE------EEEEec---CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEccCCCceEE
Q 044075 656 NVVSIFDVETD---RL------THSFKG---HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSSSGNKFHS 722 (786)
Q Consensus 656 g~I~iwD~~t~---~~------i~~l~~---h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~~~~~I~s 722 (786)
+.++|.++... .. +..+.. -..-..++..++....+...+.- .|.+||+.++.++..-+.....|..
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~ 305 (1630)
T 1xi4_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV 305 (1630)
T ss_pred ceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEE
Confidence 68888888543 11 111111 12223456666665666665555 8999999999998877777677766
Q ss_pred EEEeCCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 723 CIFHPSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 723 v~fspdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
.+.+....-+++....|.|.-..+.+...+
T Consensus 306 ~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 306 TAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred eccCCCCCceEEEcCCceEEEEEEccchhh
Confidence 665555555666667777766666655544
No 343
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=95.60 E-value=0.94 Score=53.47 Aligned_cols=237 Identities=8% Similarity=0.048 Sum_probs=125.6
Q ss_pred EEE-EcCCCCEEEEEE-C----CCeEEEEEcCCCeeeee-cC-CCCC------CeEEEEEccCCCEEEEEe---------
Q 044075 514 CCH-FSSDGKLLASAG-H----DKKVVVWNMENFQTECT-PD-DHNH------IITDVRFRPNSTQLATSS--------- 570 (786)
Q Consensus 514 ~la-fSpdg~~Lasgs-~----Dg~V~IWdl~t~~~~~~-l~-~h~~------~V~sl~fspdg~~Lasgs--------- 570 (786)
.+. ++|++++++.+- . -..|+++|+.+++.+.. +. .-+. ....++|..++.++++..
T Consensus 133 g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~ 212 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSS 212 (711)
T ss_dssp EEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTT
T ss_pred ceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcC
Confidence 344 788998876642 2 23699999999887642 22 0000 113458874444444321
Q ss_pred -CCCcEEEEcCCCCcc-eeeeecCCCCCe-EEEEEecCCCe----EEEEEcC---CCcEEEEeCCC--CeeeEeecCCeE
Q 044075 571 -FDKTVRIWDAAKPNF-CLQTYTGHNNHV-MSLDFHPKKND----LFCSCDG---NSEIRFWNLSQ--YSCARISKGGTV 638 (786)
Q Consensus 571 -~Dg~I~VWdl~s~~~-~~~~~~~h~~~V-~sl~~sp~g~~----ll~sgs~---Dg~I~iwDl~~--~~~~~~~~~~i~ 638 (786)
....|+.|.+.+... -...+.+....+ .+...++++.. ++++.+. ...+++.|... ++........-.
T Consensus 213 ~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 292 (711)
T 4hvt_A 213 LYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDA 292 (711)
T ss_dssp SSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTC
T ss_pred CCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcc
Confidence 124688998876532 233444433333 34445566663 4555432 24566666653 333333222222
Q ss_pred EEEEeCCCCEEEEE----------ECCCeEEEEEcCCCc-------EEEE-Ee-cCCCCEEEEEEcCCCCEEEEEeCC--
Q 044075 639 QVRFQPRLGLLLAA----------ASENVVSIFDVETDR-------LTHS-FK-GHSTEIHSVCWDTNGEYLASVSQD-- 697 (786)
Q Consensus 639 ~i~~sp~g~~Ll~g----------s~dg~I~iwD~~t~~-------~i~~-l~-~h~~~I~sv~~spdg~~Lasgs~D-- 697 (786)
.+..+.++..++.. ...+.|.+.|+.+.. .... +. .....+..+.|..+ .++++...+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~ 371 (711)
T 4hvt_A 293 TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVV 371 (711)
T ss_dssp EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTE
T ss_pred eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCE
Confidence 23334444443322 235678999987631 1222 32 23446778888876 455555555
Q ss_pred -eEEEEECCCCe-eEEE-EccC-CCceEEEEEeCCCCEE-EEEECC---CeEEEEECCCCeEE
Q 044075 698 -SVRVWSLASGE-CIHE-LSSS-GNKFHSCIFHPSYPTL-MVIGGY---QSLELWNMAENKCM 752 (786)
Q Consensus 698 -~I~vwDl~s~~-~i~~-l~~~-~~~I~sv~fspdg~~L-~sgs~d---g~I~IwDl~~~~~~ 752 (786)
.|.++|+.+++ .+.. +... .+.+....+.+++..+ ++.++. ..++.+|+. ++..
T Consensus 372 ~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~ 433 (711)
T 4hvt_A 372 AKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELK 433 (711)
T ss_dssp EEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEE
T ss_pred EEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEE
Confidence 58888887664 2333 3222 2456666666776544 444433 478888887 5443
No 344
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.52 E-value=3.4 Score=44.52 Aligned_cols=258 Identities=10% Similarity=-0.011 Sum_probs=121.5
Q ss_pred CEEEEEECCCeEEEEEcCC----CeeeeecCCCCCCeEEEEEcc-CCCEEEEEeCCC----cEEEEcCCCCcceeee---
Q 044075 522 KLLASAGHDKKVVVWNMEN----FQTECTPDDHNHIITDVRFRP-NSTQLATSSFDK----TVRIWDAAKPNFCLQT--- 589 (786)
Q Consensus 522 ~~Lasgs~Dg~V~IWdl~t----~~~~~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg----~I~VWdl~s~~~~~~~--- 589 (786)
..|++|+..| +.+++... ....... .....|.+|++.| +...|+++...| .|...+-.........
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~-~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPV-FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEE-STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCcc-CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccc
Confidence 3677777776 55555432 2222111 2245699999998 333455555444 3443321111111111
Q ss_pred -ecC--------CCCCeEEEEEecC--CCeEEEEEcCCCcEEEEeCCC--CeeeEee-------------------cCCe
Q 044075 590 -YTG--------HNNHVMSLDFHPK--KNDLFCSCDGNSEIRFWNLSQ--YSCARIS-------------------KGGT 637 (786)
Q Consensus 590 -~~~--------h~~~V~sl~~sp~--g~~ll~sgs~Dg~I~iwDl~~--~~~~~~~-------------------~~~i 637 (786)
+.. ....|.+|++.|. ...++ .+...+.|...+-.. .+.+... ...+
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~-~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWY-AGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEE-EEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEE-EEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCce
Confidence 111 1125778999873 34555 444455555543222 1221110 1235
Q ss_pred EEEEEeCC-CCEEEEEECCCeEEEEEcCCCcEEEEEec-----C--------CCCEEEEEEcCC-CCEEEEEeCCeEEEE
Q 044075 638 VQVRFQPR-LGLLLAAASENVVSIFDVETDRLTHSFKG-----H--------STEIHSVCWDTN-GEYLASVSQDSVRVW 702 (786)
Q Consensus 638 ~~i~~sp~-g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~-----h--------~~~I~sv~~spd-g~~Lasgs~D~I~vw 702 (786)
..+.++|. ...++++..++.|+..+-. ++.-..+.. + ...+.+|.++++ ...|+++..+.|...
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s 258 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRM 258 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEE
T ss_pred eEEEECCCCCCEEEEEECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEe
Confidence 67888874 4556666655555443222 221111110 0 134889999985 456666766665555
Q ss_pred ECCCCeeEEEEcc--CC---CceEEEEEeCC-CCEEEEEEC-----------CCeEEEEECCC-CeEE-EEc-ccC--C-
Q 044075 703 SLASGECIHELSS--SG---NKFHSCIFHPS-YPTLMVIGG-----------YQSLELWNMAE-NKCM-TIA-AHD--C- 759 (786)
Q Consensus 703 Dl~s~~~i~~l~~--~~---~~I~sv~fspd-g~~L~sgs~-----------dg~I~IwDl~~-~~~~-~~~-~h~--~- 759 (786)
+- .++.-..+.. .. ..+.++.++|. ...|++++. ++...||...+ ++.. .+. .-. .
T Consensus 259 ~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~ 337 (394)
T 3b7f_A 259 DR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQA 337 (394)
T ss_dssp ET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSC
T ss_pred CC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccc
Confidence 42 2322222221 11 33567788763 344555542 23345555443 2222 221 101 0
Q ss_pred ----CeEEEEEcCCC-CEEEEEeCCCcEEE
Q 044075 760 ----VISALAQSPVT-GMVASASHDKSVKI 784 (786)
Q Consensus 760 ----~V~slafspdg-~~LaSgs~DG~I~I 784 (786)
...+++++|.. ..|+.++.++.|.+
T Consensus 338 ~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~ 367 (394)
T 3b7f_A 338 WLTVKRQAMTADAHAPVGVYFGTTGGEIWA 367 (394)
T ss_dssp CCCCCTBSEEECCSSSCCEEEECTTSCEEE
T ss_pred cceEEEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 12468888743 45666666665543
No 345
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.49 E-value=0.047 Score=58.55 Aligned_cols=187 Identities=8% Similarity=-0.006 Sum_probs=102.1
Q ss_pred CEEEEEECCCeEEEEEcCCCeeeeecCCC-CCCeEEEEEc--c-CCCEEEEE-eCCCcEEEEcCCCCcceeeeecC---C
Q 044075 522 KLLASAGHDKKVVVWNMENFQTECTPDDH-NHIITDVRFR--P-NSTQLATS-SFDKTVRIWDAAKPNFCLQTYTG---H 593 (786)
Q Consensus 522 ~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h-~~~V~sl~fs--p-dg~~Lasg-s~Dg~I~VWdl~s~~~~~~~~~~---h 593 (786)
.++++++.||.|.-+|.++++..-.+... ..++....-. + ++..++.. ..||.|..++..++......-.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888999999999999999998887553 1222221100 1 22333333 57999999998776432111110 1
Q ss_pred CCCeEE---EEE-ec---CCCeEEEEEcCCCcEEEEeCCCCeeeEeecCCe--------E--EEEEe-----CCCCEEEE
Q 044075 594 NNHVMS---LDF-HP---KKNDLFCSCDGNSEIRFWNLSQYSCARISKGGT--------V--QVRFQ-----PRLGLLLA 651 (786)
Q Consensus 594 ~~~V~s---l~~-sp---~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~~~i--------~--~i~~s-----p~g~~Ll~ 651 (786)
..++.. ..+ .+ .....+++++.+|.+...|+.+++.+..+.... . |.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 122221 000 00 023456689999999999999999887776321 1 11111 12456777
Q ss_pred EECCCeEEEEEcCCCcEEEEE-----ecCCCC--E-EEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEE
Q 044075 652 AASENVVSIFDVETDRLTHSF-----KGHSTE--I-HSVCWDTNGEYLASVSQD-SVRVWSLASGECIH 711 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~~i~~l-----~~h~~~--I-~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~ 711 (786)
+..+..+.+.+ ++++ +..+ ..+... + .....+.|+.+++ ++.| .|..+|..+++.+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~-~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIA-PFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEE-EETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEE-ECCCCEEEEEECCCCcEEE
Confidence 77777777776 4443 2111 111000 0 0000112466655 4555 88889988888765
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.30 E-value=0.52 Score=55.57 Aligned_cols=193 Identities=7% Similarity=0.035 Sum_probs=103.8
Q ss_pred cCCCEEEEEeCC----CcEEEEcCCCCcceeeeec------CCCCCeEEEEEecCCCeEEEEEcCC------CcEEEEeC
Q 044075 561 PNSTQLATSSFD----KTVRIWDAAKPNFCLQTYT------GHNNHVMSLDFHPKKNDLFCSCDGN------SEIRFWNL 624 (786)
Q Consensus 561 pdg~~Lasgs~D----g~I~VWdl~s~~~~~~~~~------~h~~~V~sl~~sp~g~~ll~sgs~D------g~I~iwDl 624 (786)
.++.+++.|+.+ ..+.+||..+......... .....-.+++..+.++.+++.|+.+ ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 356667777643 3578888887764333211 1111122333333134566666543 35888999
Q ss_pred CCCeeeEeec---CCe-EEEEEeCCCCEEEEEECCC--eEEEEEcCCCcEEEEEe-----cCCCCEEEEEEcCC-CCEEE
Q 044075 625 SQYSCARISK---GGT-VQVRFQPRLGLLLAAASEN--VVSIFDVETDRLTHSFK-----GHSTEIHSVCWDTN-GEYLA 692 (786)
Q Consensus 625 ~~~~~~~~~~---~~i-~~i~~sp~g~~Ll~gs~dg--~I~iwD~~t~~~i~~l~-----~h~~~I~sv~~spd-g~~La 692 (786)
.+.+-..... ... .+++...++..++.|+.++ .+.+||..+..-...-. .......++.+..+ +++++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 8865443322 111 2233324777888887654 79999998875332211 11122233555555 66677
Q ss_pred EEeC--------CeEEEEECCCCee-----EEEEcc---CCCceEEEEEeCCCCEEEEEEC--------CCeEEEEECCC
Q 044075 693 SVSQ--------DSVRVWSLASGEC-----IHELSS---SGNKFHSCIFHPSYPTLMVIGG--------YQSLELWNMAE 748 (786)
Q Consensus 693 sgs~--------D~I~vwDl~s~~~-----i~~l~~---~~~~I~sv~fspdg~~L~sgs~--------dg~I~IwDl~~ 748 (786)
.|+. +.+.+||+.+..- -..+.. ....-.+++...++..++.||. ...|.+||+.+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 7654 2588999987761 111111 1111223333333666666664 24699999998
Q ss_pred CeEEE
Q 044075 749 NKCMT 753 (786)
Q Consensus 749 ~~~~~ 753 (786)
++...
T Consensus 636 ~~W~~ 640 (695)
T 2zwa_A 636 ETLTS 640 (695)
T ss_dssp TEEEE
T ss_pred CeEEE
Confidence 87663
No 347
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.16 E-value=4.3 Score=43.64 Aligned_cols=254 Identities=7% Similarity=-0.032 Sum_probs=118.7
Q ss_pred CCCeEEEEEcC--CCCEEEEEECCC----eEEEEEcCCC---eeeee---cCC--------CCCCeEEEEEcc-C-CCEE
Q 044075 509 SSKVTCCHFSS--DGKLLASAGHDK----KVVVWNMENF---QTECT---PDD--------HNHIITDVRFRP-N-STQL 566 (786)
Q Consensus 509 ~~~V~~lafSp--dg~~Lasgs~Dg----~V~IWdl~t~---~~~~~---l~~--------h~~~V~sl~fsp-d-g~~L 566 (786)
...|.+|++.| ++.++ +++..| .|... .+.+ +.+.. +.. +...|.+|++.| + ...|
T Consensus 54 ~~~v~~i~~dp~~~~~l~-~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l 131 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERML-MAARTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTW 131 (394)
T ss_dssp TSEEEEEEECSSSTTCEE-EEEEC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCE
T ss_pred CCceEEEEECCCCCCeEE-EEecCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEE
Confidence 45699999998 44444 444444 34332 2222 22221 111 113578899987 2 4556
Q ss_pred EEEeCCCcEEEEcCCCCcceee-eec----------------CCCCCeEEEEEecCC-CeEEEEEcCCCcEEEEeCCCCe
Q 044075 567 ATSSFDKTVRIWDAAKPNFCLQ-TYT----------------GHNNHVMSLDFHPKK-NDLFCSCDGNSEIRFWNLSQYS 628 (786)
Q Consensus 567 asgs~Dg~I~VWdl~s~~~~~~-~~~----------------~h~~~V~sl~~sp~g-~~ll~sgs~Dg~I~iwDl~~~~ 628 (786)
+++...+.|...+-........ ... .....|.+|.++|.. ..+++... ++.|...+-....
T Consensus 132 ~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl~~s~DgG~t 210 (394)
T 3b7f_A 132 YAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGVFESTDAGTD 210 (394)
T ss_dssp EEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEEEEESSTTSS
T ss_pred EEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCEEEECCCCCC
Confidence 6666566555543222221111 110 112457899998843 44554433 3444443322111
Q ss_pred eeEee---------------cCCeEEEEEeCC-CCEEEEEECCCeEEEEEcCCCcEEEEEec--CC---CCEEEEEEcC-
Q 044075 629 CARIS---------------KGGTVQVRFQPR-LGLLLAAASENVVSIFDVETDRLTHSFKG--HS---TEIHSVCWDT- 686 (786)
Q Consensus 629 ~~~~~---------------~~~i~~i~~sp~-g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~--h~---~~I~sv~~sp- 686 (786)
-.... ...+..+.+++. ...++++...+ |+..+-. ++.-..+.. .. ..+.++.++|
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~-G~tW~~~~~~l~~~~~~~~~~i~~~p~ 288 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRR-EGVWKRIGDAMPREVGDIGFPIVVHQR 288 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETT-TTEEECGGGGSCTTTCSCEEEEEECSS
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCC-CCcceECCCCCCCCCccceEEEEECCC
Confidence 11111 013677888886 36677766544 5544422 322222221 11 3467788876
Q ss_pred CCCEEEEEeC-----------C-eEEEEECCC-CeeEEEEcc--CC-C-----ceEEEEEeCCC-CEEEEEECCCeEEEE
Q 044075 687 NGEYLASVSQ-----------D-SVRVWSLAS-GECIHELSS--SG-N-----KFHSCIFHPSY-PTLMVIGGYQSLELW 744 (786)
Q Consensus 687 dg~~Lasgs~-----------D-~I~vwDl~s-~~~i~~l~~--~~-~-----~I~sv~fspdg-~~L~sgs~dg~I~Iw 744 (786)
+...|+++.. + ...||...+ ++.-..+.. .. . ....++++|.. ..|++++.++.|..-
T Consensus 289 ~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S 368 (394)
T 3b7f_A 289 DPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS 368 (394)
T ss_dssp CTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE
T ss_pred CCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 3333444321 2 344554443 232222211 11 1 11357787753 456666666665543
Q ss_pred ECCCCeEEEEcccCCCeEEEEEc
Q 044075 745 NMAENKCMTIAAHDCVISALAQS 767 (786)
Q Consensus 745 Dl~~~~~~~~~~h~~~V~slafs 767 (786)
+-.......+..+-..|.+|.|.
T Consensus 369 ~D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 369 ADEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp SSTTSBCEEEECSCSCEEEEEEE
T ss_pred CCCCCCceEcccCCCCeeEEEEe
Confidence 32222233344444567777764
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.03 E-value=0.89 Score=53.55 Aligned_cols=190 Identities=9% Similarity=0.081 Sum_probs=101.5
Q ss_pred CCCCEEEEEECC----CeEEEEEcCCCeeeeec--------CCCCCCeEEEEEccCCCEEEEEeCCC------cEEEEcC
Q 044075 519 SDGKLLASAGHD----KKVVVWNMENFQTECTP--------DDHNHIITDVRFRPNSTQLATSSFDK------TVRIWDA 580 (786)
Q Consensus 519 pdg~~Lasgs~D----g~V~IWdl~t~~~~~~l--------~~h~~~V~sl~fspdg~~Lasgs~Dg------~I~VWdl 580 (786)
.++.+++.||.+ ..+.+||..+.+-...- ......-..+.+..++.+++.|+.++ .+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 467788888753 46888998765433222 11111222333322677788887543 5788998
Q ss_pred CCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCC--cEEEEeCCCCeeeEeec--------CCeEEEEEeCC-CCEE
Q 044075 581 AKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNS--EIRFWNLSQYSCARISK--------GGTVQVRFQPR-LGLL 649 (786)
Q Consensus 581 ~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg--~I~iwDl~~~~~~~~~~--------~~i~~i~~sp~-g~~L 649 (786)
.+.......-......-.+++...+ +.+++.|+.++ .+.+||+.+..-..... .....+.+... +..+
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~-~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPD-GNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTT-SCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcC-CEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 8765422211111111122233223 44555666443 79999998866443321 12233555555 5566
Q ss_pred EEEEC--C-----CeEEEEEcCCCcE-----EEEEec----CCCCEEEEEEcCCCCEEEEEeC--------C-eEEEEEC
Q 044075 650 LAAAS--E-----NVVSIFDVETDRL-----THSFKG----HSTEIHSVCWDTNGEYLASVSQ--------D-SVRVWSL 704 (786)
Q Consensus 650 l~gs~--d-----g~I~iwD~~t~~~-----i~~l~~----h~~~I~sv~~spdg~~Lasgs~--------D-~I~vwDl 704 (786)
+.|+. + +.+.+||+.+..- ...+.. ..... +++...++++++.|+. . .|.+||+
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 66665 2 4689999988761 112211 11112 2333333677777762 2 6999999
Q ss_pred CCCeeE
Q 044075 705 ASGECI 710 (786)
Q Consensus 705 ~s~~~i 710 (786)
.+.+-.
T Consensus 634 ~t~~W~ 639 (695)
T 2zwa_A 634 LSETLT 639 (695)
T ss_dssp TTTEEE
T ss_pred CCCeEE
Confidence 887543
No 349
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=94.79 E-value=0.0081 Score=71.59 Aligned_cols=9 Identities=11% Similarity=0.198 Sum_probs=3.0
Q ss_pred CCcEEEEeC
Q 044075 616 NSEIRFWNL 624 (786)
Q Consensus 616 Dg~I~iwDl 624 (786)
+|...+|+.
T Consensus 487 ~G~AI~y~~ 495 (727)
T 4b8c_D 487 DGCCIFFKR 495 (727)
T ss_dssp CCCEEEC--
T ss_pred ccEEEEEEc
Confidence 344444433
No 350
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.47 E-value=3.4 Score=41.26 Aligned_cols=171 Identities=13% Similarity=0.026 Sum_probs=94.5
Q ss_pred CCEEEEEeCCCcEEEEcCCCCc---c-eeeeecCC--CCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe-------e
Q 044075 563 STQLATSSFDKTVRIWDAAKPN---F-CLQTYTGH--NNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS-------C 629 (786)
Q Consensus 563 g~~Lasgs~Dg~I~VWdl~s~~---~-~~~~~~~h--~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~-------~ 629 (786)
..+|++...| +|++=...+.. . ......++ =..+.+++|+|++. |.+. .+|.++-.+..+.. .
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCCcccccccc
Confidence 4566777777 66555444433 1 01111122 24678999999776 5444 57887777765421 1
Q ss_pred eEeec---CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcE-------EEEEecCCCCEEEEEEcCCCCEEEEEeCCeE
Q 044075 630 ARISK---GGTVQVRFQPRLGLLLAAASENVVSIFDVETDRL-------THSFKGHSTEIHSVCWDTNGEYLASVSQDSV 699 (786)
Q Consensus 630 ~~~~~---~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~-------i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I 699 (786)
.++-. .....+.|.+++.+.++ .||.|+-++-.+... ...-..--..+..|.++|+|.+.++. ++.+
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~l 156 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQF 156 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEE
T ss_pred cEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcE
Confidence 12111 12367889999887777 669998887643210 11111122468999999999988888 5565
Q ss_pred EEEECCCCe------eEEEEc-cCCCceEEEEEeCCCCEEEEEECCCeEE
Q 044075 700 RVWSLASGE------CIHELS-SSGNKFHSCIFHPSYPTLMVIGGYQSLE 742 (786)
Q Consensus 700 ~vwDl~s~~------~i~~l~-~~~~~I~sv~fspdg~~L~sgs~dg~I~ 742 (786)
+-+...+.. ....+. ..-.....+.|.+++...++. ++.|+
T Consensus 157 yr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 157 YKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp EEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred EecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeEE
Confidence 433222111 111111 222344556788888755555 66443
No 351
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.13 E-value=2 Score=48.65 Aligned_cols=181 Identities=15% Similarity=0.173 Sum_probs=113.8
Q ss_pred CCCeEEEEEcCCCcEEEEeCCCCeeeEeec----CCeEEEEEe--CCCCEEEEEECC-------Ce-E-----------E
Q 044075 605 KKNDLFCSCDGNSEIRFWNLSQYSCARISK----GGTVQVRFQ--PRLGLLLAAASE-------NV-V-----------S 659 (786)
Q Consensus 605 ~g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~----~~i~~i~~s--p~g~~Ll~gs~d-------g~-I-----------~ 659 (786)
+|+++|+---.+..|-..+++..++..+.. ..+..++|. |+..++++++.. |. + .
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 567788666678889999999988877665 455667775 788888888752 22 1 1
Q ss_pred EEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCC----------------eEEEEECCC-------Ce-------e
Q 044075 660 IFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQD----------------SVRVWSLAS-------GE-------C 709 (786)
Q Consensus 660 iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D----------------~I~vwDl~s-------~~-------~ 709 (786)
..|.++.+....+.. ......+..+++|.+.++.+.+ .+.++++.. |+ -
T Consensus 221 ~iD~~tm~v~~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~g 299 (638)
T 3sbq_A 221 AIDAETMEMAFQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSK 299 (638)
T ss_dssp EEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred EEcCCccEEEEEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCC
Confidence 133333333333221 2233345557788888777632 366776531 10 1
Q ss_pred EEEEccC---------------CCceEEEEEeCCCCEEEEEEC-CCeEEEEECCC------CeE-------EEEcccCCC
Q 044075 710 IHELSSS---------------GNKFHSCIFHPSYPTLMVIGG-YQSLELWNMAE------NKC-------MTIAAHDCV 760 (786)
Q Consensus 710 i~~l~~~---------------~~~I~sv~fspdg~~L~sgs~-dg~I~IwDl~~------~~~-------~~~~~h~~~ 760 (786)
+..+.+. ......|.++|||+++++++. +.++.++|++. ++. .....-.-.
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 1122211 122356889999999988875 55899999874 221 222234556
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEeC
Q 044075 761 ISALAQSPVTGMVASASHDKSVKIWK 786 (786)
Q Consensus 761 V~slafspdg~~LaSgs~DG~I~IWd 786 (786)
....+|.++|....|.--|..|..|+
T Consensus 380 PlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 380 PLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp EEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred ccEEEECCCCceEeeeeecceEEEEe
Confidence 78899999996666666899999985
No 352
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.04 E-value=0.44 Score=47.65 Aligned_cols=105 Identities=12% Similarity=0.030 Sum_probs=62.7
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCC--------eEEEEEccCCCEEEEEeCCCcEEEEcCCC
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHI--------ITDVRFRPNSTQLATSSFDKTVRIWDAAK 582 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~--------V~sl~fspdg~~Lasgs~Dg~I~VWdl~s 582 (786)
.+.+++|+|+|.+.++ .+|.+.-.+..+.....-+. .... ..++.|.|++.+.++ .||.|+-++..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~-s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMG-RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHH-HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccc-cccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 6779999999987766 67876655544321111111 0112 378999999987776 569998887643
Q ss_pred Cccee-----eee-cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEe
Q 044075 583 PNFCL-----QTY-TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWN 623 (786)
Q Consensus 583 ~~~~~-----~~~-~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwD 623 (786)
..... ..+ ..-=..+..|.|.|+|.... .. |+.++-+.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lya-v~--dg~lyr~~ 160 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYA-VH--GQQFYKAL 160 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEE-EE--TTEEEEEC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEE-Ee--CCcEEecC
Confidence 22110 111 11114679999999987443 33 66655443
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.95 E-value=14 Score=41.10 Aligned_cols=227 Identities=11% Similarity=0.025 Sum_probs=112.2
Q ss_pred CCeEEEEEcCCCC-EEEEEECCCeEEEEEcCCCe---eeeecC---------CCCCCeEEEEEccC----CCEEEEEeC-
Q 044075 510 SKVTCCHFSSDGK-LLASAGHDKKVVVWNMENFQ---TECTPD---------DHNHIITDVRFRPN----STQLATSSF- 571 (786)
Q Consensus 510 ~~V~~lafSpdg~-~Lasgs~Dg~V~IWdl~t~~---~~~~l~---------~h~~~V~sl~fspd----g~~Lasgs~- 571 (786)
...+.|+|.|||. .|+++...|.|++++.+... .+..+. ........|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4578999999996 45555688999999754221 112111 11456889999996 333333222
Q ss_pred -C----------CcEEEEcCCCC---------cceeeeec--CCCCCeEEEEEecCCCeEEEEEcCC-------------
Q 044075 572 -D----------KTVRIWDAAKP---------NFCLQTYT--GHNNHVMSLDFHPKKNDLFCSCDGN------------- 616 (786)
Q Consensus 572 -D----------g~I~VWdl~s~---------~~~~~~~~--~h~~~V~sl~~sp~g~~ll~sgs~D------------- 616 (786)
+ ..|.-|.+... ...+..+. ........|.|.|++..++.+|+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~ 173 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLS 173 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcC
Confidence 1 13444555321 11111121 1223467899999997555554421
Q ss_pred ---CcEEEEeCCCC------e----------------eeEeecCCeEEEEEeCC-----CC-EEEEEECCC----eEEEE
Q 044075 617 ---SEIRFWNLSQY------S----------------CARISKGGTVQVRFQPR-----LG-LLLAAASEN----VVSIF 661 (786)
Q Consensus 617 ---g~I~iwDl~~~------~----------------~~~~~~~~i~~i~~sp~-----g~-~Ll~gs~dg----~I~iw 661 (786)
|.|.-.|.+.. . ....-......++|+|. +. +++++...+ .-.|.
T Consensus 174 ~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~ 253 (463)
T 2wg3_C 174 DFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARIL 253 (463)
T ss_dssp SCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEE
T ss_pred CCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEe
Confidence 23444444331 0 00000122345789987 33 344333212 12333
Q ss_pred EcCCC------cEEEEEecCC-CCEEEEEEcC-------CCCEEEEEeCCeEEEEECCCCe---eEEEE-c--------c
Q 044075 662 DVETD------RLTHSFKGHS-TEIHSVCWDT-------NGEYLASVSQDSVRVWSLASGE---CIHEL-S--------S 715 (786)
Q Consensus 662 D~~t~------~~i~~l~~h~-~~I~sv~~sp-------dg~~Lasgs~D~I~vwDl~s~~---~i~~l-~--------~ 715 (786)
.+..+ .++..+..|. ..+..+.|-. .+.+|+..-...|....++... ....+ . .
T Consensus 254 ~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 333 (463)
T 2wg3_C 254 QIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRGY 333 (463)
T ss_dssp EEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETTSCEEEEEC-----CCEEEEECEEETTSSCSC
T ss_pred eeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCCCcEEEEEeCCCCceeeEEEeecCCccccccc
Confidence 33322 2344443221 4677888743 2345554333355555554321 11122 1 1
Q ss_pred CCCceEEEEEeCCCCEEEEEE
Q 044075 716 SGNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 716 ~~~~I~sv~fspdg~~L~sgs 736 (786)
....+..+.+.|+|.++++..
T Consensus 334 ~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 334 FSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp CCSEEEEEEECTTCCEEEEEE
T ss_pred ccCcceEEEECCCCCEEEEec
Confidence 235789999999998777766
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.12 E-value=4.2 Score=41.91 Aligned_cols=241 Identities=10% Similarity=0.029 Sum_probs=119.6
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeee
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTY 590 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~ 590 (786)
.|..|+.... +.+.-. ||.|+.|-......+-........|..|+...+.. ++. . ||.|..|-......+- .-
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg-~P 97 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTT-VP 97 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTC-CC
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCC-CC
Confidence 4556655433 222224 88898887654322211111223577777654432 333 4 8999999765432211 11
Q ss_pred cCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeeeE---eecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCc
Q 044075 591 TGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCAR---ISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDR 667 (786)
Q Consensus 591 ~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~~---~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~ 667 (786)
..-...|..|+... .+.+ .-. ||.|+.|-....-.+. .....+..++... .+.++.. ||.|+.|-.....
T Consensus 98 ~~~~~~v~~ia~G~--~hs~-al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~--~~~~~l~-~G~v~~wG~n~~g 170 (282)
T 3qhy_B 98 AEARSGVDAIAAGA--WASY-ALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGV--YTALAVK-NGGVIAWGDNYFG 170 (282)
T ss_dssp GGGSSSEEEEEEET--TEEE-EEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECS--SEEEEEE-TTEEEEEECCTTS
T ss_pred cccCCCeEEEECcC--CEEE-EEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEccc--CEEEEEE-CCEEEEecCCCCC
Confidence 11124677777653 2333 334 8999999765422111 1123455554433 3333444 7889988765421
Q ss_pred EEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 668 LTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 668 ~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
.+..-......|..|+...+.. ++. .++.|+.|-....-.+..-......|..++.... +.++.. |+.|+.|-..
T Consensus 171 qlg~p~~~~~~v~~i~~G~~hs-~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~--h~~al~-~g~v~~wG~n 245 (282)
T 3qhy_B 171 QTTVPAEAQSGVDDVAGGIFHS-LAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEW--YSLALK-NGKVIAWGSS 245 (282)
T ss_dssp TTSCCGGGGSSEEEEEECSSEE-EEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSS--CEEEEE-TTEEEEESTT
T ss_pred CCCCceecCCCeEEEEecCCEE-EEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCC--EEEEEE-CCEEEEecCC
Confidence 1110011134577776543333 333 4348888865532111110111234666655443 333344 9999999665
Q ss_pred CCeEEEEcccCCCeEEEEEcCCCCEE
Q 044075 748 ENKCMTIAAHDCVISALAQSPVTGMV 773 (786)
Q Consensus 748 ~~~~~~~~~h~~~V~slafspdg~~L 773 (786)
....+. ....|.+|+......+.
T Consensus 246 ~~gq~~---v~~~v~~iaaG~~h~~a 268 (282)
T 3qhy_B 246 RTAPSS---VQSGVSSIEAGPNAAYA 268 (282)
T ss_dssp CCCCGG---GSSCEEEEEECSSCEEE
T ss_pred CCcccc---CCCCcEEEEECcCeEEE
Confidence 533221 23467777766544333
No 355
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=91.51 E-value=16 Score=38.58 Aligned_cols=259 Identities=8% Similarity=0.046 Sum_probs=136.4
Q ss_pred CCEEEEEECCCeEEEEEcCCCee-------eeecC-CCCCCeEEEEEccCCCEEEEEeCCCcEEEE---cCCCCc-----
Q 044075 521 GKLLASAGHDKKVVVWNMENFQT-------ECTPD-DHNHIITDVRFRPNSTQLATSSFDKTVRIW---DAAKPN----- 584 (786)
Q Consensus 521 g~~Lasgs~Dg~V~IWdl~t~~~-------~~~l~-~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW---dl~s~~----- 584 (786)
...+++.+.+|.|+--.+.+.+. +..+. ...+.+..+........|+.-+..|.++-. ++....
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 34677888888888766543211 11111 123445555555555566666667765544 443321
Q ss_pred ceeee-ec-CCCCCeEEEEEecC--CCeEEEEEcCCCcEEEEeCCCCeeeE-------ee--cCCeEEEEEeCCCCEEEE
Q 044075 585 FCLQT-YT-GHNNHVMSLDFHPK--KNDLFCSCDGNSEIRFWNLSQYSCAR-------IS--KGGTVQVRFQPRLGLLLA 651 (786)
Q Consensus 585 ~~~~~-~~-~h~~~V~sl~~sp~--g~~ll~sgs~Dg~I~iwDl~~~~~~~-------~~--~~~i~~i~~sp~g~~Ll~ 651 (786)
..+.. +. .....|.++...++ ....++..+.+|.|+...+....... .+ ...+..+........++.
T Consensus 83 ~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill 162 (327)
T 3uc1_A 83 QHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLL 162 (327)
T ss_dssp EEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEE
T ss_pred EEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEE
Confidence 11111 11 12455666655442 23455588889999998876532211 11 134455555556678999
Q ss_pred EECCCeEEEEEcC--CCcE-------EE--EEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC-------eeEEE
Q 044075 652 AASENVVSIFDVE--TDRL-------TH--SFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG-------ECIHE 712 (786)
Q Consensus 652 gs~dg~I~iwD~~--t~~~-------i~--~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~-------~~i~~ 712 (786)
.+..|.+..+.+. .-.. +. .+. ....|.++...+++.+|+..+.. .++.-.+... +-+..
T Consensus 163 ~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~ 241 (327)
T 3uc1_A 163 VSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLT 241 (327)
T ss_dssp EETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEES
T ss_pred EECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEE
Confidence 9999999988876 2111 11 122 34567777666666677777777 7777665321 22222
Q ss_pred Ec--cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeE-------EEEc--ccCCCeEEEEEcCC-CCEEEEEeCCC
Q 044075 713 LS--SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKC-------MTIA--AHDCVISALAQSPV-TGMVASASHDK 780 (786)
Q Consensus 713 l~--~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~-------~~~~--~h~~~V~slafspd-g~~LaSgs~DG 780 (786)
+. ...+.+..+....+...++..+.+|.+..++..+-.. +... .....|.+++..+. ...+.+.+.+|
T Consensus 242 ~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~~~d~vv~~~~~~~~~~~~~~~~~~g 321 (327)
T 3uc1_A 242 VMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLAIARNAEESGDDNAVDANG 321 (327)
T ss_dssp SCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGGSCBCCTTSCCEECTTCCTTCCEEEEEECC-------------
T ss_pred EEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhhccccCCCCCCeEeEecCCCCEEEEEEEcCCCcceEEEEecCC
Confidence 22 2234566655555566788889888887777653221 1111 23456666665543 34566666555
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=91.41 E-value=5.2 Score=41.24 Aligned_cols=214 Identities=10% Similarity=0.010 Sum_probs=108.8
Q ss_pred CeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCeee--
Q 044075 553 IITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSCA-- 630 (786)
Q Consensus 553 ~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~~-- 630 (786)
.|..|+.... ..+.-. ||.|+.|-......+-. -......|..|+... .+.++. . ||.|+.|-....-.+
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~-p~~~~~~i~~ia~G~--~hs~~l-~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTM-PAATQSGVDAIAAGN--YHSLAL-K-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSC-CGGGGSCCCEEEECS--SEEEEE-E-TTEEEEEECCTTSTTCC
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCC-CccCCCCEEEEEeCC--CEEEEE-E-CCEEEEeeCCCCCCCCC
Confidence 5777776543 333335 89999997654332111 111123566666542 334434 4 899999976542211
Q ss_pred -EeecCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCCcEEEEEecCCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCee
Q 044075 631 -RISKGGTVQVRFQPRLGLLLAAASENVVSIFDVETDRLTHSFKGHSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGEC 709 (786)
Q Consensus 631 -~~~~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~ 709 (786)
......+..++... .+.++.. +|.|+.|-....-.+-.-......|..|+...+..++ -.++.|+.|-......
T Consensus 97 P~~~~~~v~~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~--l~~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 97 PAEARSGVDAIAAGA--WASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA--VKNGGVIAWGDNYFGQ 171 (282)
T ss_dssp CGGGSSSEEEEEEET--TEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE--EETTEEEEEECCTTST
T ss_pred CcccCCCeEEEECcC--CEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE--EECCEEEEecCCCCCC
Confidence 11123555555544 3455556 8999999765421111011123456666654333222 2334888886553211
Q ss_pred EEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 710 IHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM-TIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 710 i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
+..-......|..++.-.. +.++. .+|.|+.|-....-.+ .-......|..|+......+++ . ||.|..|
T Consensus 172 lg~p~~~~~~v~~i~~G~~--hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al-~--~g~v~~w 242 (282)
T 3qhy_B 172 TTVPAEAQSGVDDVAGGIF--HSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLAL-K--NGKVIAW 242 (282)
T ss_dssp TSCCGGGGSSEEEEEECSS--EEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEE-E--TTEEEEE
T ss_pred CCCceecCCCeEEEEecCC--EEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEE-E--CCEEEEe
Confidence 1111111345666665443 33333 5899999975543211 1112234577777654433333 2 8888887
No 357
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.23 E-value=21 Score=39.54 Aligned_cols=223 Identities=13% Similarity=0.101 Sum_probs=114.5
Q ss_pred CeEEEEEccCCC-EEEEEeCCCcEEEEcCCCCc--ceeeeec---------CCCCCeEEEEEecC---CCeEEEEEcC--
Q 044075 553 IITDVRFRPNST-QLATSSFDKTVRIWDAAKPN--FCLQTYT---------GHNNHVMSLDFHPK---KNDLFCSCDG-- 615 (786)
Q Consensus 553 ~V~sl~fspdg~-~Lasgs~Dg~I~VWdl~s~~--~~~~~~~---------~h~~~V~sl~~sp~---g~~ll~sgs~-- 615 (786)
.-+.|+|.|++. .|+++...|.|++++..... ..+..+. ........|+|+|+ ...++++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 457899999986 56666788999999754321 1111111 11356889999996 3444444332
Q ss_pred C----------CcEEEEeCCC----------CeeeEeec-----CCeEEEEEeCCCCEEEEEECCC--------------
Q 044075 616 N----------SEIRFWNLSQ----------YSCARISK-----GGTVQVRFQPRLGLLLAAASEN-------------- 656 (786)
Q Consensus 616 D----------g~I~iwDl~~----------~~~~~~~~-----~~i~~i~~sp~g~~Ll~gs~dg-------------- 656 (786)
+ ..|.-|.+.. .+.+.... .....+.|.||+.++++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~ 174 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSD 174 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCS
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcCC
Confidence 1 1344465532 11221111 2346789999998777665533
Q ss_pred ---eEEEEEcCCC---------------------cEEEEEecCCCCEEEEEEcCC-----CCE-EEEEeC---C--eEEE
Q 044075 657 ---VVSIFDVETD---------------------RLTHSFKGHSTEIHSVCWDTN-----GEY-LASVSQ---D--SVRV 701 (786)
Q Consensus 657 ---~I~iwD~~t~---------------------~~i~~l~~h~~~I~sv~~spd-----g~~-Lasgs~---D--~I~v 701 (786)
.|.-+|.+.. ..+.. .+|.. ...++|+|. |.+ ++.+.. + .-.|
T Consensus 175 ~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a-~G~RN-p~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei 252 (463)
T 2wg3_C 175 FTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFA-HGLHD-PGRCAVDRHPTDININLTILCSDSNGKNRSSARI 252 (463)
T ss_dssp CTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEE-ECCSS-CCBEEEESSCSSTTCSEEEEEECC------CEEE
T ss_pred CCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEE-ECCCC-cceEEECCCCCCcccceEEEecccCCCCCCCCeE
Confidence 2444444331 01111 12332 347899986 443 433321 1 1233
Q ss_pred EECCCC------eeEEEEccCC-CceEEEEEeCCCC------EEEEEECCCeEEEEECCCCe----EEEEc-c-------
Q 044075 702 WSLASG------ECIHELSSSG-NKFHSCIFHPSYP------TLMVIGGYQSLELWNMAENK----CMTIA-A------- 756 (786)
Q Consensus 702 wDl~s~------~~i~~l~~~~-~~I~sv~fspdg~------~L~sgs~dg~I~IwDl~~~~----~~~~~-~------- 756 (786)
..+..+ .++..+..+. ..+..+.|..... .++++...+.|....+.... ...+. +
T Consensus 253 ~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~ 332 (463)
T 2wg3_C 253 LQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRG 332 (463)
T ss_dssp EEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETTSCEEEEEC-----CCEEEEECEEETTSSCS
T ss_pred eeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCCCcEEEEEeCCCCceeeEEEeecCCcccccc
Confidence 333322 2344443221 4567777753221 24555555776666665432 11221 1
Q ss_pred -cCCCeEEEEEcCCCCEEEEEe
Q 044075 757 -HDCVISALAQSPVTGMVASAS 777 (786)
Q Consensus 757 -h~~~V~slafspdg~~LaSgs 777 (786)
....+.++.+.|||.++++..
T Consensus 333 ~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 333 YFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp CCCSEEEEEEECTTCCEEEEEE
T ss_pred cccCcceEEEECCCCCEEEEec
Confidence 235789999999999877765
No 358
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=90.94 E-value=0.046 Score=65.07 Aligned_cols=8 Identities=25% Similarity=0.189 Sum_probs=3.5
Q ss_pred HHHHHHHH
Q 044075 290 QQLIAQAQ 297 (786)
Q Consensus 290 ~~~~~~~~ 297 (786)
|+++++.+
T Consensus 50 ~~~~~~~~ 57 (727)
T 4b8c_D 50 QLHLAAVS 57 (727)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhc
Confidence 33444443
No 359
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=89.62 E-value=0.053 Score=60.35 Aligned_cols=11 Identities=18% Similarity=0.347 Sum_probs=5.7
Q ss_pred cCCHHHHHHHH
Q 044075 284 LLPQQQQQLIA 294 (786)
Q Consensus 284 ~~~~~~~~~~~ 294 (786)
+++++-|..++
T Consensus 284 l~s~e~~~~~~ 294 (449)
T 3iot_A 284 LLTDEGLEAVN 294 (449)
T ss_dssp TSSHHHHHHHH
T ss_pred hcCHHHHHHHH
Confidence 44566654443
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=89.21 E-value=27 Score=37.62 Aligned_cols=160 Identities=9% Similarity=0.063 Sum_probs=90.7
Q ss_pred cEEEEeCCCC--eeeEeec---------CCeEEEEEe---CC----CCEEEEEEC-CCeEEEEEcCCCcEEEEEec----
Q 044075 618 EIRFWNLSQY--SCARISK---------GGTVQVRFQ---PR----LGLLLAAAS-ENVVSIFDVETDRLTHSFKG---- 674 (786)
Q Consensus 618 ~I~iwDl~~~--~~~~~~~---------~~i~~i~~s---p~----g~~Ll~gs~-dg~I~iwD~~t~~~i~~l~~---- 674 (786)
.|.+||+.+. +.++.+. .....+++. +. +.+++.+.. ..-|.|||+.+++..+.+..
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 3555666665 5444332 235566666 22 345555553 57899999999866554421
Q ss_pred C--------------CCCEEEEEEcCC----CCEEEEEeCCeEEEEECCC--------CeeEEEEccC--CCceEEEEEe
Q 044075 675 H--------------STEIHSVCWDTN----GEYLASVSQDSVRVWSLAS--------GECIHELSSS--GNKFHSCIFH 726 (786)
Q Consensus 675 h--------------~~~I~sv~~spd----g~~Lasgs~D~I~vwDl~s--------~~~i~~l~~~--~~~I~sv~fs 726 (786)
. ...|..|+++|+ ++.|+-..-..-++|.+.+ ...+..+-.. ...-..++++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYD 283 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEEC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEe
Confidence 0 246888999998 7777776655444444321 1222222211 1334456675
Q ss_pred -CCCCEEEEEECCCeEEEEECCC-C----eEEEEc--ccCCCeEEEEEcCCCCEEEEEe
Q 044075 727 -PSYPTLMVIGGYQSLELWNMAE-N----KCMTIA--AHDCVISALAQSPVTGMVASAS 777 (786)
Q Consensus 727 -pdg~~L~sgs~dg~I~IwDl~~-~----~~~~~~--~h~~~V~slafspdg~~LaSgs 777 (786)
.+|..+++--....|..|+..+ . ....+. ..-..+..+.+..++.+.+.++
T Consensus 284 ~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 284 PKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp TTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred CCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 5666555556677999999876 1 112221 2223467888877777555543
No 361
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=88.06 E-value=27 Score=36.27 Aligned_cols=227 Identities=8% Similarity=0.059 Sum_probs=123.4
Q ss_pred CCCCEEEEEECCCeEEEEEcCCCeeeee---------cCCCCCCeEEEEEccCCCEEEEEeCCCcEEEE---cCCCCcc-
Q 044075 519 SDGKLLASAGHDKKVVVWNMENFQTECT---------PDDHNHIITDVRFRPNSTQLATSSFDKTVRIW---DAAKPNF- 585 (786)
Q Consensus 519 pdg~~Lasgs~Dg~V~IWdl~t~~~~~~---------l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW---dl~s~~~- 585 (786)
|+..++++.+.+|.|+--.+.+.+.... +..+ +.+..+........|+..+..|.++-+ ++.....
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 3556788899999998887765433221 2222 344444444455667777778876554 3432211
Q ss_pred ----eee-ee-cCCCCCeEEEEEec---CCCeEEEEEcCCCcEEEEeCCCCee-----eEe--e--cCCeEEEEEeCCCC
Q 044075 586 ----CLQ-TY-TGHNNHVMSLDFHP---KKNDLFCSCDGNSEIRFWNLSQYSC-----ARI--S--KGGTVQVRFQPRLG 647 (786)
Q Consensus 586 ----~~~-~~-~~h~~~V~sl~~sp---~g~~ll~sgs~Dg~I~iwDl~~~~~-----~~~--~--~~~i~~i~~sp~g~ 647 (786)
.+. .+ ......|.++...+ ++.+ ++..+.+|.++...+..... +.. + .+.+..+.......
T Consensus 80 a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~-ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQDERITAILPVTEFEEGVK-VFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGED 158 (307)
T ss_dssp SCCEEGGGTSCCCTTCCEEEEEEESCCCTTCE-EEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTC
T ss_pred CCCeEhhhccCCCCCCEEEEEEEeccCCCCcE-EEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCC
Confidence 111 11 12334566665432 3333 44778899999987653211 111 1 13445555555567
Q ss_pred EEEEEECCCeEEEEEcCCCc-------EEE--EEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC-------C--e
Q 044075 648 LLLAAASENVVSIFDVETDR-------LTH--SFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS-------G--E 708 (786)
Q Consensus 648 ~Ll~gs~dg~I~iwD~~t~~-------~i~--~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s-------~--~ 708 (786)
.++..+.+|.+..++...-. -+. .+. ....|.++....++..|++.+.. .++-.++.. + .
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~ 237 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGV 237 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCE
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCE
Confidence 88899999999888874321 111 122 34556666655555667777776 777766632 1 1
Q ss_pred eEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 709 CIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 709 ~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
....+....+.+..+....+...++..+.+|.+.-+++.+
T Consensus 238 ~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 238 ISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp ESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred EeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 1222333335565555544556677888888777666554
No 362
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=86.66 E-value=38 Score=36.50 Aligned_cols=221 Identities=7% Similarity=0.004 Sum_probs=111.3
Q ss_pred CeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc-----------eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEE
Q 044075 553 IITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF-----------CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRF 621 (786)
Q Consensus 553 ~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~-----------~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~i 621 (786)
.|..|+.. ..+.+.-..||.|+.|=...... ..-........|..|+.. ..+. +.-..||.|+.
T Consensus 76 ~v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G--~~hs-~al~~~G~v~~ 150 (423)
T 3mvd_K 76 DAVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAG--DSHS-ACLLEDGRVFA 150 (423)
T ss_dssp SEEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEEC--SSEE-EEEETTSCEEE
T ss_pred CceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcC--cCeE-EEEeCCCeEEE
Confidence 46566554 55667778899999995432110 000111122456666653 2233 34566899999
Q ss_pred EeC--CC-Ce-----------eeEeec-CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC--------------------
Q 044075 622 WNL--SQ-YS-----------CARISK-GGTVQVRFQPRLGLLLAAASENVVSIFDVETD-------------------- 666 (786)
Q Consensus 622 wDl--~~-~~-----------~~~~~~-~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~-------------------- 666 (786)
|-. .. +. .+.... ..+..|+ .-..+.++...+|.|+.|-....
T Consensus 151 wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va--~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~ 228 (423)
T 3mvd_K 151 WGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIA--SGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKR 228 (423)
T ss_dssp EECEECSSSEEESBTTBCEEEEEESSTTCCEEEEE--ECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTT
T ss_pred EeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEe--cCCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccc
Confidence 975 32 11 111111 2333343 34457777788999999964321
Q ss_pred ---cEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCC-----------CeeEEEEccCCCceEEEEEeCCCCE
Q 044075 667 ---RLTHSFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLAS-----------GECIHELSSSGNKFHSCIFHPSYPT 731 (786)
Q Consensus 667 ---~~i~~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s-----------~~~i~~l~~~~~~I~sv~fspdg~~ 731 (786)
.+..........|..|+.... ..++.-..+ .|+.|-... .............|..++.- ..+
T Consensus 229 ~~~~p~~v~~~~~~~v~~i~~g~~-~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G--~~h 305 (423)
T 3mvd_K 229 DLLRPTQLIITRAKPFEAIWATNY-CTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGG--QHH 305 (423)
T ss_dssp TTSSCEEECCTTCCCEEEEEEETT-EEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEEC--SSE
T ss_pred cccCCeEEeecCCccEEEEEECCc-EEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcc--cCe
Confidence 111111112334555554322 112222344 777775332 11111111123456655543 346
Q ss_pred EEEEECCCeEEEEECCCC-------------eEEEEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 732 LMVIGGYQSLELWNMAEN-------------KCMTIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 732 L~sgs~dg~I~IwDl~~~-------------~~~~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
.++...+|.|+.|-.... ....+..-...|..|+.... ..+.-..||.|..|
T Consensus 306 t~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~--hs~alt~~G~v~~w 370 (423)
T 3mvd_K 306 TVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEV--CSYAVTIDGKLYSW 370 (423)
T ss_dssp EEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETT--EEEEEETTSCEEEE
T ss_pred EEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCC--eEEEEcCCCCEEEE
Confidence 677788999999964321 11122222336777776643 33344678888888
No 363
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=85.16 E-value=44 Score=35.78 Aligned_cols=230 Identities=12% Similarity=0.090 Sum_probs=127.0
Q ss_pred EcCCCCEEEEEECCCeEEEEEcCCC---------eeeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEE---cCCCCc
Q 044075 517 FSSDGKLLASAGHDKKVVVWNMENF---------QTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIW---DAAKPN 584 (786)
Q Consensus 517 fSpdg~~Lasgs~Dg~V~IWdl~t~---------~~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW---dl~s~~ 584 (786)
+-++..++++.+.+|.|+--.+.+. .....++. .+.+..+........|+..+..|.++-+ ++....
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 3467889999999999998765432 22233333 4556666666566667777778876655 343211
Q ss_pred -----ce-eeee-cCCCCCeEEEEEecC--CCeEEEEEcCCCcEEEEeCCCCeee-----Ee--e--cCCeEEEEEeCCC
Q 044075 585 -----FC-LQTY-TGHNNHVMSLDFHPK--KNDLFCSCDGNSEIRFWNLSQYSCA-----RI--S--KGGTVQVRFQPRL 646 (786)
Q Consensus 585 -----~~-~~~~-~~h~~~V~sl~~sp~--g~~ll~sgs~Dg~I~iwDl~~~~~~-----~~--~--~~~i~~i~~sp~g 646 (786)
.. ...+ ......|.++....+ ....++.++..|.++...+...... .. + .+.+..+......
T Consensus 82 r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~ 161 (370)
T 3l6v_A 82 SNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGD 161 (370)
T ss_dssp TTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSC
T ss_pred cccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCC
Confidence 01 1111 123455666654431 2334447788999999886543221 11 1 1344555555556
Q ss_pred CEEEEEECCCeEEEEEcCCCc-------EEEEEe-cCCCCEEEEEEcC--------------------------------
Q 044075 647 GLLLAAASENVVSIFDVETDR-------LTHSFK-GHSTEIHSVCWDT-------------------------------- 686 (786)
Q Consensus 647 ~~Ll~gs~dg~I~iwD~~t~~-------~i~~l~-~h~~~I~sv~~sp-------------------------------- 686 (786)
..++..+..|.+..|+...-. -+.-+. .....|.++...+
T Consensus 162 ~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~ 241 (370)
T 3l6v_A 162 RDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVA 241 (370)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC------------------------------
T ss_pred ceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccccc
Confidence 788889999998888764311 111111 1234455554433
Q ss_pred ---CCCEEEEEeCC-eEEEEECCC-------CeeEE--EEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 044075 687 ---NGEYLASVSQD-SVRVWSLAS-------GECIH--ELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMA 747 (786)
Q Consensus 687 ---dg~~Lasgs~D-~I~vwDl~s-------~~~i~--~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~ 747 (786)
++..|++.+.. ..+...+.. ++=+. .+....+.+..+.+..+...++..+..|.+.-..+.
T Consensus 242 ~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~ 315 (370)
T 3l6v_A 242 DNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGS 315 (370)
T ss_dssp -----CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEGG
T ss_pred cccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHh
Confidence 34567777776 666666542 12122 222234556665555555677778888866655543
No 364
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=84.61 E-value=0.42 Score=40.12 Aligned_cols=51 Identities=22% Similarity=0.281 Sum_probs=35.7
Q ss_pred cchHHHhHHHHHHHHhhcCCcHHHHHHHHhcCCCCCCCccCCCCCCchHHHH
Q 044075 7 NWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVAPDPVAIDAPGGFLFEWW 58 (786)
Q Consensus 7 ~~~~~~~l~~yiydy~~k~~~~~~a~~~~~e~~~~~~~~~~~~~~~fL~eww 58 (786)
.+.++ =||.-|++||..+|+.+++.+|.+|.+++.+.....-..|.|--=|
T Consensus 7 ~rQ~e-EL~kaI~~YL~~~~~~~~~~alr~e~~~~~~~~~~~ky~gLLEKKW 57 (88)
T 1uuj_A 7 QRQRD-ELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKW 57 (88)
T ss_dssp HHHHH-HHHHHHHHHHHHTTCHHHHHHHHHHTTCCCCHHHHHHHTTHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHhcCcHHHHHHHHHHhcCCCCchhhhhhhhhhhhhH
Confidence 33433 4799999999999999999999999987654221122345554444
No 365
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=84.57 E-value=72 Score=37.75 Aligned_cols=142 Identities=12% Similarity=0.126 Sum_probs=69.7
Q ss_pred CCCeEEEEEccC-CCEEEEEeCCCcEEEEcCCCCcceeeeecC-------CCCCeEEEEEecCCCe-EEEEEcC-C----
Q 044075 551 NHIITDVRFRPN-STQLATSSFDKTVRIWDAAKPNFCLQTYTG-------HNNHVMSLDFHPKKND-LFCSCDG-N---- 616 (786)
Q Consensus 551 ~~~V~sl~fspd-g~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~-------h~~~V~sl~~sp~g~~-ll~sgs~-D---- 616 (786)
...|.+|+++|. ...++++...+.|...+=. ++ .-..+.. ....|.+|+++|.... +++..+. .
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~Dg-G~-tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAG-TS-KWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETT-TT-EEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCC-CC-CeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 457999999995 4567777777766555422 22 1111221 1246999999986543 4433332 1
Q ss_pred CcEEEEeCCCCeeeEeec----------C--CeEEEEEeCCC-CEEEEEECCCeEEEEEcCCCcEEEEEec------CCC
Q 044075 617 SEIRFWNLSQYSCARISK----------G--GTVQVRFQPRL-GLLLAAASENVVSIFDVETDRLTHSFKG------HST 677 (786)
Q Consensus 617 g~I~iwDl~~~~~~~~~~----------~--~i~~i~~sp~g-~~Ll~gs~dg~I~iwD~~t~~~i~~l~~------h~~ 677 (786)
+.| +...+.++.-.... + .+..++++|.. +.++++...+.|.. ..+.++--..+.. ...
T Consensus 92 ~~v-~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~ 169 (789)
T 1sqj_A 92 AAF-YVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGI 169 (789)
T ss_dssp CEE-EEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTT
T ss_pred cEE-EEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCC
Confidence 222 22233332222111 1 23457777753 45555553443322 2222221112211 124
Q ss_pred CEEEEEEcCC-CCEEEEEeC
Q 044075 678 EIHSVCWDTN-GEYLASVSQ 696 (786)
Q Consensus 678 ~I~sv~~spd-g~~Lasgs~ 696 (786)
.+..|.++|. +..++++..
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~ 189 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASAT 189 (789)
T ss_dssp CEEEEEECTTSTTCEEEEES
T ss_pred CeEEEEECCCCCCEEEEEEc
Confidence 5788999874 445555554
No 366
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=84.51 E-value=72 Score=37.73 Aligned_cols=155 Identities=14% Similarity=0.121 Sum_probs=78.1
Q ss_pred ceeeeeEEeecCCCCeEEEEEcCC-CCEEEEEECCCeEEEEEcCCCeeeeecCCC-------CCCeEEEEEccC-CCEEE
Q 044075 497 FSFNEVSSIRKSSSKVTCCHFSSD-GKLLASAGHDKKVVVWNMENFQTECTPDDH-------NHIITDVRFRPN-STQLA 567 (786)
Q Consensus 497 ~~~~~v~~l~~H~~~V~~lafSpd-g~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h-------~~~V~sl~fspd-g~~La 567 (786)
..|+.+... -.+.|.+|+++|. ...+++++..+.|...+ +.++.-..+..+ ...|.+|++.|. ...++
T Consensus 4 ~~W~~~~~~--~~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~ 80 (789)
T 1sqj_A 4 YEFKNVAIG--GGGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLY 80 (789)
T ss_dssp CEEEECCCC--BCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEE
T ss_pred ccceEccCC--CCCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEE
Confidence 345554432 2458999999995 45666677677665554 333332223222 246999999984 34455
Q ss_pred EEeCCCc----EEEEcCCCCcceeeeec-C--------CCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe---eeE
Q 044075 568 TSSFDKT----VRIWDAAKPNFCLQTYT-G--------HNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS---CAR 631 (786)
Q Consensus 568 sgs~Dg~----I~VWdl~s~~~~~~~~~-~--------h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~---~~~ 631 (786)
++..+.. -.||...++...-.... . ....+..++++|.....++.+...+.|.. ..+.++ .+.
T Consensus 81 ~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~ 159 (789)
T 1sqj_A 81 LAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVT 159 (789)
T ss_dssp EEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEET
T ss_pred EEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCc
Confidence 5443211 34443333221111111 0 01135678888865555555553333322 222222 211
Q ss_pred ee------cCCeEEEEEeCC-CCEEEEEECC
Q 044075 632 IS------KGGTVQVRFQPR-LGLLLAAASE 655 (786)
Q Consensus 632 ~~------~~~i~~i~~sp~-g~~Ll~gs~d 655 (786)
.. ...+..+.++|. ...++++..+
T Consensus 160 ~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 160 SIPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TSCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred cCccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 10 134667888874 3466666654
No 367
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=82.63 E-value=49 Score=34.38 Aligned_cols=185 Identities=10% Similarity=0.114 Sum_probs=103.8
Q ss_pred ccCCCEEEEEeCCCcEEEEcCCCCcc--------eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee--
Q 044075 560 RPNSTQLATSSFDKTVRIWDAAKPNF--------CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC-- 629 (786)
Q Consensus 560 spdg~~Lasgs~Dg~I~VWdl~s~~~--------~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~-- 629 (786)
-++..++++.+.+|.|+--.+..-.. ....+... ..+..+........++ ..+..|.++-+.......
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll-~~T~~G~~~~~~~~~ip~~~ 82 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLF-MISNEGKLYLINAYEIKDSS 82 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEE-EEETTSEEEEEEGGGSCC--
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEE-EEECCCeEEEEEHHHCCCCC
Confidence 35667889999999999886543211 01112222 3444544444445555 455678877665532110
Q ss_pred -----------eEeec-CCeEEEEEeC---CCCEEEEEECCCeEEEEEcCCC-------cEEEEEecCCCCEEEEEEcCC
Q 044075 630 -----------ARISK-GGTVQVRFQP---RLGLLLAAASENVVSIFDVETD-------RLTHSFKGHSTEIHSVCWDTN 687 (786)
Q Consensus 630 -----------~~~~~-~~i~~i~~sp---~g~~Ll~gs~dg~I~iwD~~t~-------~~i~~l~~h~~~I~sv~~spd 687 (786)
+.... ..+..+.... +..+++..+..|.++...+... .....+.. ...+..+....+
T Consensus 83 r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~ 161 (312)
T 1suu_A 83 RASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFK 161 (312)
T ss_dssp -----CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECT
T ss_pred ccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCC
Confidence 11111 2344443322 4678899999999998887432 22222332 456666655554
Q ss_pred CCEEEEEeCC-eEEEEECCC---------CeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 688 GEYLASVSQD-SVRVWSLAS---------GECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 688 g~~Lasgs~D-~I~vwDl~s---------~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
...++..+.+ .+..+.... |.....+. .+..|..+....++..+++.+..|.+...++..
T Consensus 162 ~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 162 DEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 5556666655 666666542 22222232 245666766666677899999999988888754
No 368
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=82.30 E-value=50 Score=34.29 Aligned_cols=224 Identities=8% Similarity=0.035 Sum_probs=124.1
Q ss_pred CCCCEEEEEECCCeEEEEEcCCCeeee---------ecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC---CCcc-
Q 044075 519 SDGKLLASAGHDKKVVVWNMENFQTEC---------TPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA---KPNF- 585 (786)
Q Consensus 519 pdg~~Lasgs~Dg~V~IWdl~t~~~~~---------~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~---s~~~- 585 (786)
++..++++.+.+|.|+--.+.+.+... .+... +.+..+........++..+..|.++-+... ....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 466788899999999988876543221 12222 445555555556677888888987766543 2110
Q ss_pred ----e---eeeecCCCCCeEEEEEec---CCCeEEEEEcCCCcEEEEeCCCCeeeE-------ee--cCCeEEEEEeCCC
Q 044075 586 ----C---LQTYTGHNNHVMSLDFHP---KKNDLFCSCDGNSEIRFWNLSQYSCAR-------IS--KGGTVQVRFQPRL 646 (786)
Q Consensus 586 ----~---~~~~~~h~~~V~sl~~sp---~g~~ll~sgs~Dg~I~iwDl~~~~~~~-------~~--~~~i~~i~~sp~g 646 (786)
. ...+. ....|.++...+ +..+++ ..+.+|.++...+......+ .+ .+.+..+......
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll-~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~ 162 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLL-LTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKD 162 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEE-EEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTT
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEE-EEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCC
Confidence 0 01122 234455554443 234444 66779999988875432211 11 1345555555556
Q ss_pred CEEEEEECCCeEEEEEcCCC-------cEEE--EEecCCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC-------ee
Q 044075 647 GLLLAAASENVVSIFDVETD-------RLTH--SFKGHSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG-------EC 709 (786)
Q Consensus 647 ~~Ll~gs~dg~I~iwD~~t~-------~~i~--~l~~h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~-------~~ 709 (786)
..++..+.+|.+..+....- .-+. .+. ....|.++....++..|++.+.. .++..++..- +=
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~~~~~R~~kG 241 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKISELKRGATG 241 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGSCBCCTTCCC
T ss_pred CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHHHhcccCCCCCC
Confidence 78999999999999987541 1111 222 24556666655556666677766 7777776431 21
Q ss_pred EEEEc---cCCCceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 044075 710 IHELS---SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNM 746 (786)
Q Consensus 710 i~~l~---~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl 746 (786)
+..+. .....+..+....+...++..+..|.+.-...
T Consensus 242 v~~~~~~k~~~~~lv~~~~~~~~~~l~~~t~~g~~~r~~~ 281 (312)
T 1suu_A 242 YTSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVA 281 (312)
T ss_dssp EECSCTTCTTTCSEEEEEEECTTCEEEEEETTCEEEEEEG
T ss_pred EEeeEccCCCCCeEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 22222 22344544433345556777777775443443
No 369
>1qb3_A Cyclin-dependent kinases regulatory subunit; cell cycle mutagenesis domain swapping, cyclin-dependent KIN cycle; 3.00A {Saccharomyces cerevisiae} SCOP: d.97.1.1
Probab=79.04 E-value=0.42 Score=43.49 Aligned_cols=9 Identities=11% Similarity=-0.064 Sum_probs=3.9
Q ss_pred cCCchhhhh
Q 044075 162 QPLLDARMA 170 (786)
Q Consensus 162 ~~~~~~~~~ 170 (786)
.|.|..|++
T Consensus 12 ~l~d~er~~ 20 (150)
T 1qb3_A 12 KLTDQERAR 20 (150)
T ss_dssp CCCHHHHHH
T ss_pred cchHHHHHH
Confidence 344444444
No 370
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=77.80 E-value=1.5 Score=36.92 Aligned_cols=33 Identities=18% Similarity=0.430 Sum_probs=29.4
Q ss_pred hHHHHHHHHhhcCCcHHHHHHHHhcCCCCCCCc
Q 044075 13 MLDVYIYDYLVKKKLHNTAKSFMTEGKVAPDPV 45 (786)
Q Consensus 13 ~l~~yiydy~~k~~~~~~a~~~~~e~~~~~~~~ 45 (786)
-+|--||-||..+|+..+|-+|-+|.++...+.
T Consensus 7 evN~LI~RYLqEsGf~hsAf~f~~Es~i~~~~~ 39 (90)
T 2xtc_A 7 EVNFLVYRYLQESGFSHSAFTFGIESHISQSNI 39 (90)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTGGGSCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHhcCCcccc
Confidence 478999999999999999999999999876543
No 371
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=75.88 E-value=87 Score=33.31 Aligned_cols=225 Identities=8% Similarity=0.076 Sum_probs=114.0
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc----------eeeeecC-CCCCeEEEEEecCCCeEEEEEcCCCcEEEE
Q 044075 554 ITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF----------CLQTYTG-HNNHVMSLDFHPKKNDLFCSCDGNSEIRFW 622 (786)
Q Consensus 554 V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~----------~~~~~~~-h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iw 622 (786)
|..|+.. ....+.-..||.|..|=...... ....+.. ....+..++++.-..+.+ .-..||.|+.|
T Consensus 55 i~~i~~G--~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~-al~~~G~v~~w 131 (389)
T 3kci_A 55 PVQLIGG--EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL-ALSSEGEVYSW 131 (389)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEE-EEETTSCEEEE
T ss_pred eEEEEeC--CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEE-EEcCCCCEEEE
Confidence 4444432 44566667889999995432110 0111111 122344455554444444 55669999999
Q ss_pred eCCCCe-----------eeEeec--CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC---------c--EEEEEec-CCC
Q 044075 623 NLSQYS-----------CARISK--GGTVQVRFQPRLGLLLAAASENVVSIFDVETD---------R--LTHSFKG-HST 677 (786)
Q Consensus 623 Dl~~~~-----------~~~~~~--~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~---------~--~i~~l~~-h~~ 677 (786)
-....- ...... .....+.+..-..+.++...+|.|+.|-.... . ....+.. ...
T Consensus 132 G~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~ 211 (389)
T 3kci_A 132 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH 211 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTS
T ss_pred eCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCC
Confidence 653210 011111 11122333344567777888999999975321 0 1111111 234
Q ss_pred CEEEEEEcCCCCEEEEEeCC-eEEEEECCCC-----------eeEEEEcc-CCCceEEEEEeCCCCEEEEEECCCeEEEE
Q 044075 678 EIHSVCWDTNGEYLASVSQD-SVRVWSLASG-----------ECIHELSS-SGNKFHSCIFHPSYPTLMVIGGYQSLELW 744 (786)
Q Consensus 678 ~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~-----------~~i~~l~~-~~~~I~sv~fspdg~~L~sgs~dg~I~Iw 744 (786)
.|..|+......+.++...+ .|+.|-.... .....+.. ....|..++.-. .+.++...+|.|+.|
T Consensus 212 ~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v~~w 289 (389)
T 3kci_A 212 RVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAVYTW 289 (389)
T ss_dssp CEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET--TEEEEEETTSCEEEE
T ss_pred eEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC--CEEEEEeCCCeEEEE
Confidence 56666654433455555556 8888864321 11112221 223466555543 356667889999999
Q ss_pred ECCCC----------e--EEEEcc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 745 NMAEN----------K--CMTIAA-HDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 745 Dl~~~----------~--~~~~~~-h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
-.... . ...+.. ....|..|+... ...+....||.|..|
T Consensus 290 G~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~--~h~~al~~~G~v~~w 341 (389)
T 3kci_A 290 GKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS--LHCVCCTEDGEVYTW 341 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECS--SEEEEEETTCCEEEE
T ss_pred eCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEecc--CeEEEECCCCCEEEe
Confidence 65321 1 112222 223576766543 344445678888887
No 372
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=73.19 E-value=94 Score=32.48 Aligned_cols=153 Identities=12% Similarity=0.032 Sum_probs=87.9
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEc---CC------CeeeeecC--CCCCCeEEEEEcc---CCCEEEEEeCCCcE
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNM---EN------FQTECTPD--DHNHIITDVRFRP---NSTQLATSSFDKTV 575 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl---~t------~~~~~~l~--~h~~~V~sl~fsp---dg~~Lasgs~Dg~I 575 (786)
+.+..+........|+.-+..|.++-... .. +..+..+- .....|..+...+ +..++++++.+|.|
T Consensus 42 D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~i 121 (327)
T 3uc1_A 42 DIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLV 121 (327)
T ss_dssp GCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEE
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEE
Confidence 34555555555556666677887665543 32 22222211 1234555554433 57799999999999
Q ss_pred EEEcCCCCc------ceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCC--CCee-------eEee----cCC
Q 044075 576 RIWDAAKPN------FCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLS--QYSC-------ARIS----KGG 636 (786)
Q Consensus 576 ~VWdl~s~~------~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~--~~~~-------~~~~----~~~ 636 (786)
+-..+..-. .....+.. .+.+..+........++ ..+..|.+..+... .-.. +... ...
T Consensus 122 Kr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~il-l~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~ 199 (327)
T 3uc1_A 122 KKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLL-LVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDR 199 (327)
T ss_dssp EEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEE-EEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCC
T ss_pred EEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEE-EEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCE
Confidence 988764321 11122333 34555555554555555 45568888877766 3211 1111 134
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEEEEcC
Q 044075 637 TVQVRFQPRLGLLLAAASENVVSIFDVE 664 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~dg~I~iwD~~ 664 (786)
+..+...+.+..++..+..|.++...+.
T Consensus 200 Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 200 LLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp EEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 5556555666789999999999888764
No 373
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=72.48 E-value=1.5e+02 Score=34.54 Aligned_cols=177 Identities=9% Similarity=0.018 Sum_probs=96.4
Q ss_pred EecCCCeEEEEEcCCC----cEEEEeCCCCeeeEe-ecCCe----------EEEEEeCCCCEEEEEEC-----------C
Q 044075 602 FHPKKNDLFCSCDGNS----EIRFWNLSQYSCARI-SKGGT----------VQVRFQPRLGLLLAAAS-----------E 655 (786)
Q Consensus 602 ~sp~g~~ll~sgs~Dg----~I~iwDl~~~~~~~~-~~~~i----------~~i~~sp~g~~Ll~gs~-----------d 655 (786)
++|+++.++++-+..| .|+++|+.+++.+.. +.... ..++|. +.+.++++.. .
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCcCcCCCC
Confidence 7788888877766544 699999999877631 11111 234776 4444544421 2
Q ss_pred CeEEEEEcCCC--cEEEEEecCCCC-EEEEEEcCCCC-----EEEEEeCC----eEEEEECCC--CeeEEEEccCCCceE
Q 044075 656 NVVSIFDVETD--RLTHSFKGHSTE-IHSVCWDTNGE-----YLASVSQD----SVRVWSLAS--GECIHELSSSGNKFH 721 (786)
Q Consensus 656 g~I~iwD~~t~--~~i~~l~~h~~~-I~sv~~spdg~-----~Lasgs~D----~I~vwDl~s--~~~i~~l~~~~~~I~ 721 (786)
..|+.|.+-+. +-...+.+.... ..++..+.++. .+++.+.+ .+.+.|... ++ +..+.......
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~- 293 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPSDAT- 293 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCTTCE-
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCCcce-
Confidence 46888887765 223334432222 33455566666 24544433 466667653 33 23333332211
Q ss_pred EEEEeCCCCEEEEE----------ECCCeEEEEECCCC--------eEEEE--cccCCCeEEEEEcCCCCEEEEEeCCCc
Q 044075 722 SCIFHPSYPTLMVI----------GGYQSLELWNMAEN--------KCMTI--AAHDCVISALAQSPVTGMVASASHDKS 781 (786)
Q Consensus 722 sv~fspdg~~L~sg----------s~dg~I~IwDl~~~--------~~~~~--~~h~~~V~slafspdg~~LaSgs~DG~ 781 (786)
+..+.++..++.. ...+.|.+.|+.+. ....+ ......|..+.|..+ .++++...++.
T Consensus 294 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~ 371 (711)
T 4hvt_A 294 -LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVV 371 (711)
T ss_dssp -EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTE
T ss_pred -EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCE
Confidence 2334455444432 23567888988653 12222 233446778888865 57777777775
Q ss_pred EE
Q 044075 782 VK 783 (786)
Q Consensus 782 I~ 783 (786)
-+
T Consensus 372 ~~ 373 (711)
T 4hvt_A 372 AK 373 (711)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 374
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=72.11 E-value=89 Score=31.74 Aligned_cols=153 Identities=11% Similarity=0.013 Sum_probs=89.3
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEE---cCCCeeeeecCCCCCCeEEEEEcc-CCCEEEEEeCCCcEEEEcCCCC-
Q 044075 509 SSKVTCCHFSSDGKLLASAGHDKKVVVWN---MENFQTECTPDDHNHIITDVRFRP-NSTQLATSSFDKTVRIWDAAKP- 583 (786)
Q Consensus 509 ~~~V~~lafSpdg~~Lasgs~Dg~V~IWd---l~t~~~~~~l~~h~~~V~sl~fsp-dg~~Lasgs~Dg~I~VWdl~s~- 583 (786)
.+.|.++.......+|+..+.+|.++--. +........+. ....|..+.... +..+++..+.+|.|+-..+..-
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~ 101 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE 101 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence 45666666555556677777888766543 33322111132 345666664422 5678999999999999876542
Q ss_pred ----cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee-------eEe--ec--CCeEEEEEeCCCCE
Q 044075 584 ----NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC-------ARI--SK--GGTVQVRFQPRLGL 648 (786)
Q Consensus 584 ----~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~-------~~~--~~--~~i~~i~~sp~g~~ 648 (786)
......+.. .+.+..+........++ ..+..|.++.++...-.. +.. +. ..+..+....++..
T Consensus 102 ~~~~G~~~i~lke-gD~l~~~~~~~~~~~il-l~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ 179 (276)
T 3no0_A 102 YKAQGMPIIKLTE-GDEVVSIASSVDETHIL-LFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPY 179 (276)
T ss_dssp TCSTTEECSCCCT-TCCEEEEEECCSSCEEE-EEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSE
T ss_pred hhcCCeEEEecCC-CCEEEEEEEeCCCCEEE-EEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCE
Confidence 111122332 34555555554444555 556688888877543111 111 11 34455555556678
Q ss_pred EEEEECCCeEEEEEcC
Q 044075 649 LLAAASENVVSIFDVE 664 (786)
Q Consensus 649 Ll~gs~dg~I~iwD~~ 664 (786)
++..+..|.++...+.
T Consensus 180 ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 180 LLVITAKGRVKKISHE 195 (276)
T ss_dssp EEEEETTSCEEEEEGG
T ss_pred EEEEeCCCcEEEeEHH
Confidence 9999999998888764
No 375
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=71.89 E-value=1.8e+02 Score=35.22 Aligned_cols=37 Identities=22% Similarity=0.416 Sum_probs=32.3
Q ss_pred CEEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEc
Q 044075 678 EIHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELS 714 (786)
Q Consensus 678 ~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~ 714 (786)
.+.+++..++..++++-+.| ++|||++.++.++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777888888999999999 99999999999988764
No 376
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=69.51 E-value=1.1e+02 Score=31.63 Aligned_cols=218 Identities=9% Similarity=0.035 Sum_probs=110.4
Q ss_pred cCCCEEEEEeCCCcEEEEcCCCCcc--------eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeC---CC---
Q 044075 561 PNSTQLATSSFDKTVRIWDAAKPNF--------CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNL---SQ--- 626 (786)
Q Consensus 561 pdg~~Lasgs~Dg~I~VWdl~s~~~--------~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl---~~--- 626 (786)
|+..++++.+.+|.|+--.+.+-.. ....+... +.+..+........++ ..+..|.++-+.. ..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll-~fT~~G~~~~~~~~elp~~~~ 78 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHIL-CFSSRGRVYSMKVYQLPEATR 78 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEE-EEETTSEEEEEEGGGSCCCCS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEE-EEECCCEEEEEEhhHCcCCCC
Confidence 3456788899999998776643211 01112222 3344444444445555 3444677655543 22
Q ss_pred ---Ceee----Eeec-CCeEEEEEe---CCCCEEEEEECCCeEEEEEcCCC-------cEEEEEecCCCCEEEEEEcCCC
Q 044075 627 ---YSCA----RISK-GGTVQVRFQ---PRLGLLLAAASENVVSIFDVETD-------RLTHSFKGHSTEIHSVCWDTNG 688 (786)
Q Consensus 627 ---~~~~----~~~~-~~i~~i~~s---p~g~~Ll~gs~dg~I~iwD~~t~-------~~i~~l~~h~~~I~sv~~spdg 688 (786)
+..+ .... ..+..+..- .++.+++..+..|.++...+... .....+..+ ..+..+....+.
T Consensus 79 ~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 79 GARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp SSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred CCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence 1111 1111 234444332 34568999999999999876421 111223333 555555554444
Q ss_pred CEEEEEeCC-eEEEEECCC---------CeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCe--------
Q 044075 689 EYLASVSQD-SVRVWSLAS---------GECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAENK-------- 750 (786)
Q Consensus 689 ~~Lasgs~D-~I~vwDl~s---------~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~-------- 750 (786)
..|+..+.+ .+..++... |.....+. .+..|.++....++..+++.+..|.++-.++....
T Consensus 158 ~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG 236 (307)
T 1zi0_A 158 DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKG 236 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCC
T ss_pred CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCC
Confidence 445555544 555555432 11111222 24566666655566789999999988888764321
Q ss_pred EE--EEcccCCCeEEEEEcCCCCEEEEEeCCCcE
Q 044075 751 CM--TIAAHDCVISALAQSPVTGMVASASHDKSV 782 (786)
Q Consensus 751 ~~--~~~~h~~~V~slafspdg~~LaSgs~DG~I 782 (786)
.. .+....+.+..+....+..-|+..+.+|.+
T Consensus 237 ~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ 270 (307)
T 1zi0_A 237 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTL 270 (307)
T ss_dssp EESSCCCTTTCSEEEEEEECTTCEEEEEESSCCE
T ss_pred EEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcE
Confidence 11 222233455554443334445555566654
No 377
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=69.44 E-value=1.1e+02 Score=31.81 Aligned_cols=228 Identities=10% Similarity=0.066 Sum_probs=124.9
Q ss_pred CCCCEEEEEECCCeEEEEEcCCCee----eeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEc---CCCCc-----ce
Q 044075 519 SDGKLLASAGHDKKVVVWNMENFQT----ECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWD---AAKPN-----FC 586 (786)
Q Consensus 519 pdg~~Lasgs~Dg~V~IWdl~t~~~----~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWd---l~s~~-----~~ 586 (786)
|+..++++.+.+|.|+--.+.+.+. ...+... +.+..+........|+..+..|.++-+. +.... ..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 5667888999999999877653211 1123333 3454555555556677777788765553 32211 01
Q ss_pred e-eee-cCCCCCeEEEEEecC---CCeEEEEEcCCCcEEEEeCCCCeeeE--------eec--CCeEEEEEeCCCCEEEE
Q 044075 587 L-QTY-TGHNNHVMSLDFHPK---KNDLFCSCDGNSEIRFWNLSQYSCAR--------ISK--GGTVQVRFQPRLGLLLA 651 (786)
Q Consensus 587 ~-~~~-~~h~~~V~sl~~sp~---g~~ll~sgs~Dg~I~iwDl~~~~~~~--------~~~--~~i~~i~~sp~g~~Ll~ 651 (786)
+ ..+ ......|.++...++ +.++ +.++.+|.++...+......+ .++ +.+..+........++.
T Consensus 82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~l-l~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l 160 (323)
T 1wp5_A 82 IANIIPIDRDEEIIKAIPINDFELNGYF-LFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFL 160 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSCEE-EEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEE
T ss_pred hhhccCCCCCCEEEEEEEecccCCCceE-EEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEE
Confidence 1 111 112345665544332 3344 477889999998875322211 111 34445555555678889
Q ss_pred EECCCeEEEEEcCCCc-------EEEEEec-CCCCEEEEEEcCCCC-EEEEEeCC-eEEEEECCC-------CeeEEEEc
Q 044075 652 AASENVVSIFDVETDR-------LTHSFKG-HSTEIHSVCWDTNGE-YLASVSQD-SVRVWSLAS-------GECIHELS 714 (786)
Q Consensus 652 gs~dg~I~iwD~~t~~-------~i~~l~~-h~~~I~sv~~spdg~-~Lasgs~D-~I~vwDl~s-------~~~i~~l~ 714 (786)
.+.+|.+..|....-. -+.-+.- ....|.++...+++. .|++.+.. ..+..++.. ++-+..+.
T Consensus 161 ~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~ 240 (323)
T 1wp5_A 161 VTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILR 240 (323)
T ss_dssp EETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSC
T ss_pred EeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECee
Confidence 9999999988874321 1221211 334566665444444 56666665 666666543 22222222
Q ss_pred ---cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 715 ---SSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 715 ---~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
.....+..+....+...++..+..|.+..+++.+
T Consensus 241 ~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 241 ELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp CCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred ecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 2233555444444455688888888777666554
No 378
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=68.37 E-value=1.1e+02 Score=31.15 Aligned_cols=192 Identities=10% Similarity=0.002 Sum_probs=108.9
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEE---cCCCCcceeeeecCCCCCeEEEEEecC-CCeEEEEEcCCCcEEEEeCCCC
Q 044075 552 HIITDVRFRPNSTQLATSSFDKTVRIW---DAAKPNFCLQTYTGHNNHVMSLDFHPK-KNDLFCSCDGNSEIRFWNLSQY 627 (786)
Q Consensus 552 ~~V~sl~fspdg~~Lasgs~Dg~I~VW---dl~s~~~~~~~~~~h~~~V~sl~~sp~-g~~ll~sgs~Dg~I~iwDl~~~ 627 (786)
+.+..+.-......|+.-+.+|.++-- ++....... .+ .....|..+.. ++ ....++..+.+|.|+...+...
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-ll-~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~ 100 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-LK-SREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEF 100 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-CS-STTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-cC-CCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHh
Confidence 455555544444556666667776543 332221111 12 23456666644 42 2345557888999999987654
Q ss_pred e------eeEeec--CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC---------cEEEEEecCCCCEEEEEEcCCCCE
Q 044075 628 S------CARISK--GGTVQVRFQPRLGLLLAAASENVVSIFDVETD---------RLTHSFKGHSTEIHSVCWDTNGEY 690 (786)
Q Consensus 628 ~------~~~~~~--~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~---------~~i~~l~~h~~~I~sv~~spdg~~ 690 (786)
. ....++ ..+..+........++..+..|.++.+....- .....+. ....|..+...+++.+
T Consensus 101 ~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ 179 (276)
T 3no0_A 101 EYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPY 179 (276)
T ss_dssp TTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSE
T ss_pred hhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCE
Confidence 2 111111 34445555556678999999999998876421 1111222 2355666655556667
Q ss_pred EEEEeCC-eEEEEECCC-------CeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEE--EECCC
Q 044075 691 LASVSQD-SVRVWSLAS-------GECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLEL--WNMAE 748 (786)
Q Consensus 691 Lasgs~D-~I~vwDl~s-------~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~I--wDl~~ 748 (786)
++..+.. .++...+.. ++-+..+ ...+.+..+....+...++..+.+|.+.. ++..+
T Consensus 180 ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 180 LLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 7777766 777776532 2233333 33455655554444557888888888777 77553
No 379
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=64.25 E-value=45 Score=40.47 Aligned_cols=38 Identities=21% Similarity=0.130 Sum_probs=33.8
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP 547 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l 547 (786)
..|.+++..++..+|++-+.|+++|||++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 46788888889999999999999999999999888765
No 380
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=60.21 E-value=69 Score=36.57 Aligned_cols=58 Identities=14% Similarity=0.161 Sum_probs=42.4
Q ss_pred eEEEEEeCCCCEEEEEECC------------CeEEEEEcCCCcEEEEEec-CCCCEEEEEEcCCCCEEEEE
Q 044075 637 TVQVRFQPRLGLLLAAASE------------NVVSIFDVETDRLTHSFKG-HSTEIHSVCWDTNGEYLASV 694 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~d------------g~I~iwD~~t~~~i~~l~~-h~~~I~sv~~spdg~~Lasg 694 (786)
.-.|+|++.|.++++-..+ +.+.+.+..++++...+.+ ...+++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3568999999866554432 2466777777877666665 45789999999999988765
No 381
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=56.01 E-value=2.1e+02 Score=30.50 Aligned_cols=141 Identities=6% Similarity=0.032 Sum_probs=78.5
Q ss_pred CCeEEEEEe---cC----CCeEEEEEcCCCcEEEEeCCCCeeeEeec---------------------CCeEEEEEeCC-
Q 044075 595 NHVMSLDFH---PK----KNDLFCSCDGNSEIRFWNLSQYSCARISK---------------------GGTVQVRFQPR- 645 (786)
Q Consensus 595 ~~V~sl~~s---p~----g~~ll~sgs~Dg~I~iwDl~~~~~~~~~~---------------------~~i~~i~~sp~- 645 (786)
+.+..+.+. |. +.+.+++=.....|.++|+.+++..++.. .++..++++|+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~ 231 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD 231 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence 457788877 22 34445455567889999999877655431 35667788887
Q ss_pred ---CCEEEEEECCC-eEEEEE---cCCC---cEEEEEecC--CCCEEEEEEc-CCCCEEEEEeCC-eEEEEECCC-C---
Q 044075 646 ---LGLLLAAASEN-VVSIFD---VETD---RLTHSFKGH--STEIHSVCWD-TNGEYLASVSQD-SVRVWSLAS-G--- 707 (786)
Q Consensus 646 ---g~~Ll~gs~dg-~I~iwD---~~t~---~~i~~l~~h--~~~I~sv~~s-pdg~~Lasgs~D-~I~vwDl~s-~--- 707 (786)
++.|+...-.+ .++-.. ++.. ..+..+-.. ...-..++++ .+|.++++--+. .|..|+..+ .
T Consensus 232 ~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~ 311 (381)
T 3q6k_A 232 SEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRM 311 (381)
T ss_dssp TTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCG
T ss_pred CCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCcccc
Confidence 66666666544 344333 1221 112222111 1334456675 567666666555 899999876 1
Q ss_pred eeEEEEcc--CCCceEEEEEeCCCCEEEEE
Q 044075 708 ECIHELSS--SGNKFHSCIFHPSYPTLMVI 735 (786)
Q Consensus 708 ~~i~~l~~--~~~~I~sv~fspdg~~L~sg 735 (786)
..+..+.. .-.....+.+..++...+..
T Consensus 312 ~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 312 KNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp GGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred CceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 12222221 12345677776666543333
No 382
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=52.08 E-value=2.3e+02 Score=29.79 Aligned_cols=220 Identities=10% Similarity=0.111 Sum_probs=112.7
Q ss_pred CEEEEEECCCeEEEEEcCCC-----------eeeeecC-CCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCc-----
Q 044075 522 KLLASAGHDKKVVVWNMENF-----------QTECTPD-DHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPN----- 584 (786)
Q Consensus 522 ~~Lasgs~Dg~V~IWdl~t~-----------~~~~~l~-~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~----- 584 (786)
...+.-..||.|+.|-.... .....+. .....+..++.+......+.-..||.|+.|-.....
T Consensus 63 ~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g 142 (389)
T 3kci_A 63 QTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 142 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSS
T ss_pred CeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCC
Confidence 34445556788888854321 1111111 122345556676666777777889999999543211
Q ss_pred -----ceeeeecC-CCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCC------------eeeEe--ec-CCeEEEEEe
Q 044075 585 -----FCLQTYTG-HNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQY------------SCARI--SK-GGTVQVRFQ 643 (786)
Q Consensus 585 -----~~~~~~~~-h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~------------~~~~~--~~-~~i~~i~~s 643 (786)
.....+.. ....|..|+.- ..+. +.-..+|.|+.|-.... ....+ +. ..+..++..
T Consensus 143 ~~~~~~~p~~v~~l~~~~i~~va~G--~~hs-~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 143 NRSPCDRPRVIESLRGIEVVDVAAG--GAHS-ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp SCCCEEEEEECGGGTTSCEEEEEEC--SSEE-EEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCccCcCCeEecccCCCeEEEEEeC--cCeE-EEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 00111111 12256666553 2333 34556899999965421 01111 11 235555554
Q ss_pred CCCCEEEEEECCCeEEEEEcCCC-----------cEEEEEec-CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC---
Q 044075 644 PRLGLLLAAASENVVSIFDVETD-----------RLTHSFKG-HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG--- 707 (786)
Q Consensus 644 p~g~~Ll~gs~dg~I~iwD~~t~-----------~~i~~l~~-h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~--- 707 (786)
....+.++...++.|+.|-.... .....+.. ....|..|+... .+.++-..+ .|+.|-....
T Consensus 220 ~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v~~wG~n~~GqL 297 (389)
T 3kci_A 220 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAVYTWGKGDYHRL 297 (389)
T ss_dssp CSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET--TEEEEEETTSCEEEEECCGGGTT
T ss_pred CCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC--CEEEEEeCCCeEEEEeCCCCCCC
Confidence 44467778888999999965421 01111121 222465555432 233333455 7888865320
Q ss_pred -----e---eEEEEcc-CCCceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 708 -----E---CIHELSS-SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 708 -----~---~i~~l~~-~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
. ....+.. ....|..++.- ..+.++...||.|+.|-...
T Consensus 298 G~g~~~~~~~P~~v~~l~~~~v~~ia~G--~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 298 GHGSDDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp CSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTCCEEEEECCT
T ss_pred CCCCCccccCCeEeccCCCCCEEEEEec--cCeEEEECCCCCEEEeeCCC
Confidence 1 1112221 22346655543 34567778899999996653
No 383
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=49.84 E-value=3.6e+02 Score=31.27 Aligned_cols=117 Identities=10% Similarity=0.076 Sum_probs=60.2
Q ss_pred cceeeeeEEeecCCCCeEEEEEcCCC-CEEEEEECCCeEEEEEcCCCeeeeecCCC-------CCCeEEEEEcc-CCCEE
Q 044075 496 AFSFNEVSSIRKSSSKVTCCHFSSDG-KLLASAGHDKKVVVWNMENFQTECTPDDH-------NHIITDVRFRP-NSTQL 566 (786)
Q Consensus 496 ~~~~~~v~~l~~H~~~V~~lafSpdg-~~Lasgs~Dg~V~IWdl~t~~~~~~l~~h-------~~~V~sl~fsp-dg~~L 566 (786)
...|+.+..- .-.+.|..|+++|.. ..|+++...+.|..++- .++.-..+..+ ...|.+|++.| +.+.+
T Consensus 10 ~~~w~~~~~~-~~~g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v 87 (737)
T 2cn3_A 10 PYKWDNVVIG-GGGGFMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRV 87 (737)
T ss_dssp CEEEEEECCC-SBCSCCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCE
T ss_pred CCeeEEcccC-CCcceeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEE
Confidence 4566665432 223379999999953 45666665666655542 23322222221 24599999998 33444
Q ss_pred EEEeCC-------CcEEEEcCCCCcceeee-ecCC--------CCCeEEEEEecCCCeEEEEEc
Q 044075 567 ATSSFD-------KTVRIWDAAKPNFCLQT-YTGH--------NNHVMSLDFHPKKNDLFCSCD 614 (786)
Q Consensus 567 asgs~D-------g~I~VWdl~s~~~~~~~-~~~h--------~~~V~sl~~sp~g~~ll~sgs 614 (786)
+++... +...||.-.++...-.. .... ...+.+|+++|.....++.+.
T Consensus 88 ~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 88 YIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp EEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred EEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 444321 12455554433211111 1111 112467999987654444554
No 384
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=48.94 E-value=2.7e+02 Score=29.54 Aligned_cols=220 Identities=9% Similarity=0.006 Sum_probs=113.7
Q ss_pred EccCCCEEEEEeCCCcEEEEcCCC------C--cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEe---CCC-
Q 044075 559 FRPNSTQLATSSFDKTVRIWDAAK------P--NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWN---LSQ- 626 (786)
Q Consensus 559 fspdg~~Lasgs~Dg~I~VWdl~s------~--~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwD---l~~- 626 (786)
+-|+..++++.+.+|.|+--.+.. + ......+. ....+..+........+++ .+..|.++-+. +..
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~-fT~~G~~~~~~~~eip~~ 80 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLT-FTSSGKVFWLPVHQLPEA 80 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEE-EETTSEEEEEEGGGSCBC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEE-EeCCCeEEEEEHHHCcCC
Confidence 346788999999999998764421 1 11122233 3455666655555555553 44467666554 322
Q ss_pred -----CeeeE-e--e--cCCeEEEEEe---CCCCEEEEEECCCeEEEEEcCCC-------cEEEEEecCCCCEEEEEEcC
Q 044075 627 -----YSCAR-I--S--KGGTVQVRFQ---PRLGLLLAAASENVVSIFDVETD-------RLTHSFKGHSTEIHSVCWDT 686 (786)
Q Consensus 627 -----~~~~~-~--~--~~~i~~i~~s---p~g~~Ll~gs~dg~I~iwD~~t~-------~~i~~l~~h~~~I~sv~~sp 686 (786)
+..+. . + ...+..+..- ..+.+|+.++..|.++...+... .....+.. ...+..+....
T Consensus 81 ~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~ 159 (370)
T 3l6v_A 81 GSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTD 159 (370)
T ss_dssp CTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEEC
T ss_pred CcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeC
Confidence 11111 0 1 1344444332 24568999999999998876432 11122332 34555555544
Q ss_pred CCCEEEEEeCC-eEEEEECCC---------CeeEEEEccCCCceEEEEEeC-----------------------------
Q 044075 687 NGEYLASVSQD-SVRVWSLAS---------GECIHELSSSGNKFHSCIFHP----------------------------- 727 (786)
Q Consensus 687 dg~~Lasgs~D-~I~vwDl~s---------~~~i~~l~~~~~~I~sv~fsp----------------------------- 727 (786)
....|+..+.+ .+..|+... |.....+. ....|.++...+
T Consensus 160 ~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~ 238 (370)
T 3l6v_A 160 GDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVI 238 (370)
T ss_dssp SCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC---------------------------
T ss_pred CCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeC-CCCEEEEEEEecccccccccccccccccccccccccccccc
Confidence 44455555555 555554432 11111221 234455554443
Q ss_pred ------CCCEEEEEECCCeEEEEECCCCeE--------E--EEcccCCCeEEEEEcCCCCEEEEEeCCCcE
Q 044075 728 ------SYPTLMVIGGYQSLELWNMAENKC--------M--TIAAHDCVISALAQSPVTGMVASASHDKSV 782 (786)
Q Consensus 728 ------dg~~L~sgs~dg~I~IwDl~~~~~--------~--~~~~h~~~V~slafspdg~~LaSgs~DG~I 782 (786)
++..|++.+..|..+...+..... . .+....+.+..+.+..+..-|+..+..|.+
T Consensus 239 ~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~ 309 (370)
T 3l6v_A 239 DVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTL 309 (370)
T ss_dssp --------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCE
T ss_pred ccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeE
Confidence 446899999999888877654322 1 222233455555444444444445555543
No 385
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.61 E-value=3.7e+02 Score=31.30 Aligned_cols=35 Identities=23% Similarity=0.500 Sum_probs=28.3
Q ss_pred EEEEEEcCCCCEEEEEeCC-eEEEEECCCCeeEEEEcc
Q 044075 679 IHSVCWDTNGEYLASVSQD-SVRVWSLASGECIHELSS 715 (786)
Q Consensus 679 I~sv~~spdg~~Lasgs~D-~I~vwDl~s~~~i~~l~~ 715 (786)
|.++.+ +..++++-+.| ++|+|+++++.++.+...
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 554444 47799999999 999999999998877654
No 386
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=46.71 E-value=2.9e+02 Score=29.31 Aligned_cols=223 Identities=8% Similarity=-0.063 Sum_probs=109.4
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEEcCCCe-------------eeeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEE
Q 044075 512 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQ-------------TECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIW 578 (786)
Q Consensus 512 V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~-------------~~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VW 578 (786)
|..|+.. +.+.+.-..||.|+.|-....- ....+. ....|..|+.. ....++-..||.|+.|
T Consensus 77 v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~G--~~hs~al~~~G~v~~w 151 (423)
T 3mvd_K 77 AVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISAG--DSHSACLLEDGRVFAW 151 (423)
T ss_dssp EEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred ceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEcC--cCeEEEEeCCCeEEEE
Confidence 5555544 3455556678888888654211 011111 22356666654 3455566789999999
Q ss_pred cC--CCCcce---------eeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe-------------------
Q 044075 579 DA--AKPNFC---------LQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS------------------- 628 (786)
Q Consensus 579 dl--~s~~~~---------~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~------------------- 628 (786)
-. .....+ ..........|..|+.. ..+. +.-..+|.|+.|-....-
T Consensus 152 G~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G--~~hs-~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~ 228 (423)
T 3mvd_K 152 GSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASG--ADHL-VILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKR 228 (423)
T ss_dssp ECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEEC--SSEE-EEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTT
T ss_pred eCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecC--CCeE-EEEecCCeEEEeeCCcCCccCCCcccccccccccccc
Confidence 75 221110 01111123456666653 2233 345568999999643210
Q ss_pred ----eeEe--ec-CCeEEEEEeCCCCEEEEE-ECCCeEEEEEcCCC-----------cEEEEEecCCCCEEEEEEcCCCC
Q 044075 629 ----CARI--SK-GGTVQVRFQPRLGLLLAA-ASENVVSIFDVETD-----------RLTHSFKGHSTEIHSVCWDTNGE 689 (786)
Q Consensus 629 ----~~~~--~~-~~i~~i~~sp~g~~Ll~g-s~dg~I~iwD~~t~-----------~~i~~l~~h~~~I~sv~~spdg~ 689 (786)
...+ .. ..+..++.. ....++. ..++.|+.|-.... ............|..|+.. ..
T Consensus 229 ~~~~p~~v~~~~~~~v~~i~~g--~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G--~~ 304 (423)
T 3mvd_K 229 DLLRPTQLIITRAKPFEAIWAT--NYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGG--QH 304 (423)
T ss_dssp TTSSCEEECCTTCCCEEEEEEE--TTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEEC--SS
T ss_pred cccCCeEEeecCCccEEEEEEC--CcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcc--cC
Confidence 1111 01 223333332 2233333 57788888864321 1111111113456655532 23
Q ss_pred EEEEEeCC-eEEEEECCCC------------eeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 044075 690 YLASVSQD-SVRVWSLASG------------ECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAE 748 (786)
Q Consensus 690 ~Lasgs~D-~I~vwDl~s~------------~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~ 748 (786)
+.++-..+ .|+.|-.... .....+......|..++.-. .+.++...+|.|+.|=...
T Consensus 305 ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~--~hs~alt~~G~v~~wG~n~ 374 (423)
T 3mvd_K 305 HTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGE--VCSYAVTIDGKLYSWGSGV 374 (423)
T ss_dssp EEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEET--TEEEEEETTSCEEEEECCT
T ss_pred eEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCC--CeEEEEcCCCCEEEECCCC
Confidence 33344445 7888854320 11222332333666666553 3566668899999996543
No 387
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=44.42 E-value=3.1e+02 Score=29.01 Aligned_cols=220 Identities=10% Similarity=0.074 Sum_probs=110.7
Q ss_pred CCeEEEEEccCCCEEEEEeCCCcEEEEcCCCCcc------------eeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcE
Q 044075 552 HIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNF------------CLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEI 619 (786)
Q Consensus 552 ~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~s~~~------------~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I 619 (786)
..|..|+.. ....+.-..||.|+.|-...... ....+ .....|..|+.- ....+.-..||.|
T Consensus 59 ~~i~~va~G--~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v-~l~~~i~~va~G---~~hs~alt~~G~v 132 (413)
T 1a12_A 59 EDVVQAEAG--GMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-ELQEKVVQVSAG---DSHTAALTDDGRV 132 (413)
T ss_dssp SCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEEC-CCCSCEEEEEEC---SSEEEEEETTSCE
T ss_pred CCeEEEEeC--CCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEe-cCCCcEEEEecC---CCeEEEEcCCCcE
Confidence 456666654 34555667889999995432110 00111 112356666653 2233345668999
Q ss_pred EEEeC--CCC-e------------eeEee-cCCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC-cE--------------
Q 044075 620 RFWNL--SQY-S------------CARIS-KGGTVQVRFQPRLGLLLAAASENVVSIFDVETD-RL-------------- 668 (786)
Q Consensus 620 ~iwDl--~~~-~------------~~~~~-~~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~-~~-------------- 668 (786)
+.|-. ... . ...+. ...+..|+ .-..+.++.+.+|.|+.|-.... ++
T Consensus 133 ~~wG~~~n~~GqlG~~~~~~~~~~P~~v~~~~~i~~ia--~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~ 210 (413)
T 1a12_A 133 FLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVA--SGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQ 210 (413)
T ss_dssp EEEECEEETTEEEESSBBTBCEEEEEEECCSSCEEEEE--ECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGG
T ss_pred EEeeCCcCCCCccCcCCccccccCCEEecCCCCEEEEE--ecCceEEEEcCCCCEEEeeCCCCCccCCCccccccccccc
Confidence 99975 211 1 11111 12333333 34456777788899999975431 10
Q ss_pred -------EEEEec------CCCCEEEEEEcCCCCEEEEEeCC-eEEEEECCCC----------e-eEEEEccC-C--Cce
Q 044075 669 -------THSFKG------HSTEIHSVCWDTNGEYLASVSQD-SVRVWSLASG----------E-CIHELSSS-G--NKF 720 (786)
Q Consensus 669 -------i~~l~~------h~~~I~sv~~spdg~~Lasgs~D-~I~vwDl~s~----------~-~i~~l~~~-~--~~I 720 (786)
-..+.. ....|..|+...+ +.++...+ .|+.|-.... . ....+... . ..|
T Consensus 211 ~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~~--hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v 288 (413)
T 1a12_A 211 GLERLLVPKCVMLKSRGSRGHVRFQDAFCGAY--FTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSW 288 (413)
T ss_dssp GHHHHHSCEECCCBCSSCCSBCCEEEEEEETT--EEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCE
T ss_pred cccccccCceEeeccccccCCccEEEEEeCCC--EEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceE
Confidence 000110 1234666654332 23333344 7888865421 0 11112111 1 336
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEECCC----------CeE-E-EEcccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 721 HSCIFHPSYPTLMVIGGYQSLELWNMAE----------NKC-M-TIAAHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 721 ~sv~fspdg~~L~sgs~dg~I~IwDl~~----------~~~-~-~~~~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
..++.. ..+.++...+|.|+.|-... ... . .....-..|..|+... ...+.-..||.|..|
T Consensus 289 ~~ia~G--~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~l~~v~~v~~G~--~hs~alt~~G~v~~w 361 (413)
T 1a12_A 289 VGFSGG--QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGA--SVGYAVTKDGRVFAW 361 (413)
T ss_dssp EEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCSSSSEEEEEECS--SEEEEEETTSCEEEE
T ss_pred EEEecc--cceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecccCceeEEEECc--ceEEEEeCCCCEEEe
Confidence 555543 34667777899999996432 111 1 1112223677777653 344445578888887
No 388
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=41.32 E-value=3.3e+02 Score=33.51 Aligned_cols=34 Identities=24% Similarity=0.495 Sum_probs=29.2
Q ss_pred ceEEEEEeCCCCEEEEEECCCeEEEEECCCCeEE
Q 044075 719 KFHSCIFHPSYPTLMVIGGYQSLELWNMAENKCM 752 (786)
Q Consensus 719 ~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~~~~ 752 (786)
.+.+++..++..++++.+.|++++||++.++.++
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v 272 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCV 272 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeE
Confidence 3455667788899999999999999999999887
No 389
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=34.42 E-value=27 Score=43.39 Aligned_cols=38 Identities=21% Similarity=0.130 Sum_probs=32.8
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeec
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTP 547 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l 547 (786)
..|.+++..++..+|++-+.|+++|||++.++.++.+.
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 45667777788899999999999999999999988775
No 390
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=32.22 E-value=1.6e+02 Score=33.52 Aligned_cols=60 Identities=18% Similarity=0.193 Sum_probs=44.3
Q ss_pred CCEEEEEEcCCCCEEEEEeC------------C-eEEEEECCCCeeEEEEccC-CCceEEEEEeCCCCEEEEEE
Q 044075 677 TEIHSVCWDTNGEYLASVSQ------------D-SVRVWSLASGECIHELSSS-GNKFHSCIFHPSYPTLMVIG 736 (786)
Q Consensus 677 ~~I~sv~~spdg~~Lasgs~------------D-~I~vwDl~s~~~i~~l~~~-~~~I~sv~fspdg~~L~sgs 736 (786)
.....|+|+++|.+.++... . .|..++..+++....+... ...++.++|+||++.|++.-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678999999998874322 1 5777787778766655543 46789999999999888764
No 391
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=32.13 E-value=95 Score=35.40 Aligned_cols=59 Identities=14% Similarity=0.151 Sum_probs=41.8
Q ss_pred CeEEEEEcCCCCEEEEEECC------------CeEEEEEcCCCeeeeecCCC-CCCeEEEEEccCCCEEEEE
Q 044075 511 KVTCCHFSSDGKLLASAGHD------------KKVVVWNMENFQTECTPDDH-NHIITDVRFRPNSTQLATS 569 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~D------------g~V~IWdl~t~~~~~~l~~h-~~~V~sl~fspdg~~Lasg 569 (786)
..--|+|++.|.++++-..+ ..+.+.+..+++....+..+ ...++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45678999999866654321 23566666677776666554 4689999999999887765
No 392
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=31.05 E-value=1.5e+02 Score=33.65 Aligned_cols=59 Identities=14% Similarity=0.138 Sum_probs=43.0
Q ss_pred eEEEEEeCCCCEEEEEEC------------CCeEEEEEcCCCcEEEEEec-CCCCEEEEEEcCCCCEEEEEe
Q 044075 637 TVQVRFQPRLGLLLAAAS------------ENVVSIFDVETDRLTHSFKG-HSTEIHSVCWDTNGEYLASVS 695 (786)
Q Consensus 637 i~~i~~sp~g~~Ll~gs~------------dg~I~iwD~~t~~~i~~l~~-h~~~I~sv~~spdg~~Lasgs 695 (786)
...+.|.++|...++... .+.|+.++..++++...+.. ....++.++|+||++.|+++-
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 456889999887774432 12677778877877666654 346799999999999888764
No 393
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=30.93 E-value=4.6e+02 Score=27.00 Aligned_cols=154 Identities=10% Similarity=0.036 Sum_probs=85.5
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCC---------Ceeeeec-C-CCCCCeEEEEEcc---CCCEEEEEeCCCcE
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMEN---------FQTECTP-D-DHNHIITDVRFRP---NSTQLATSSFDKTV 575 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t---------~~~~~~l-~-~h~~~V~sl~fsp---dg~~Lasgs~Dg~I 575 (786)
+.+..+........|+..+..|.++-+.... +..+..+ . .....|.++...+ ++.+|+.++.+|.+
T Consensus 39 D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~i 118 (323)
T 1wp5_A 39 DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMV 118 (323)
T ss_dssp CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEE
T ss_pred CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeE
Confidence 3454544444556777777888876665432 2222121 1 1233455543333 25689999999999
Q ss_pred EEEcCCCC-------cceeeeecCCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCee-------eEee---c-CCe
Q 044075 576 RIWDAAKP-------NFCLQTYTGHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYSC-------ARIS---K-GGT 637 (786)
Q Consensus 576 ~VWdl~s~-------~~~~~~~~~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~~-------~~~~---~-~~i 637 (786)
+...+..- ......+.. .+.+..+........++ ..+.+|.+..++...-.. ++.. . ..+
T Consensus 119 Krt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~-l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~V 196 (323)
T 1wp5_A 119 KKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELF-LVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYI 196 (323)
T ss_dssp EEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEE-EEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCE
T ss_pred EEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEE-EEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEE
Confidence 99876421 111112332 25565555554445555 556688888887643211 1111 1 335
Q ss_pred EEEEEeCCCC-EEEEEECCCeEEEEEcCC
Q 044075 638 VQVRFQPRLG-LLLAAASENVVSIFDVET 665 (786)
Q Consensus 638 ~~i~~sp~g~-~Ll~gs~dg~I~iwD~~t 665 (786)
..+....++. .+++.+..|..+..++..
T Consensus 197 v~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 197 VSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 5554444445 788889889888877654
No 394
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=29.04 E-value=2.8e+02 Score=27.56 Aligned_cols=68 Identities=7% Similarity=0.138 Sum_probs=41.8
Q ss_pred CCceEEEEEeCCCCEEEEEECCCeEEEEECCCC-------eEE-EEcccCCCeEEEEEc-CCCCEEEEEeCCCcEEEe
Q 044075 717 GNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN-------KCM-TIAAHDCVISALAQS-PVTGMVASASHDKSVKIW 785 (786)
Q Consensus 717 ~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~-------~~~-~~~~h~~~V~slafs-pdg~~LaSgs~DG~I~IW 785 (786)
+..|..+....++.+|+.++..|.++...+.+- ... .+.. .+.+..+... .++..|+..+.+|.+..+
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf 159 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMF 159 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEE
Confidence 456666654456678999999999998877432 111 2222 3445554444 344567778888876554
No 395
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=27.44 E-value=5.6e+02 Score=26.92 Aligned_cols=261 Identities=12% Similarity=0.070 Sum_probs=128.0
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEEcCCC-----------eeeeecC-CCCCCeEEEEEccCCCEEEEEeCC-CcEE
Q 044075 510 SKVTCCHFSSDGKLLASAGHDKKVVVWNMENF-----------QTECTPD-DHNHIITDVRFRPNSTQLATSSFD-KTVR 576 (786)
Q Consensus 510 ~~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~-----------~~~~~l~-~h~~~V~sl~fspdg~~Lasgs~D-g~I~ 576 (786)
..|..|+.-. .+.+.-..||.|+.|=.... .....+. .....|..|+... .+.+.-..| +.|+
T Consensus 16 ~~v~~ia~G~--~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~--~ht~al~~~gg~v~ 91 (406)
T 4d9s_A 16 RKVLIISAGA--SHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA--DHTVAYSQSGMEVY 91 (406)
T ss_dssp CCEEEEEECS--SEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECS--SEEEEEETTTTEEE
T ss_pred cceEEEecCC--CeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCc--ceEEEEECCCCEEE
Confidence 3566666543 34555567888888864421 1111111 1223576766553 333434445 4899
Q ss_pred EEcCCCCcc----------eeeeec-CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe---------e--eEeec
Q 044075 577 IWDAAKPNF----------CLQTYT-GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS---------C--ARISK 634 (786)
Q Consensus 577 VWdl~s~~~----------~~~~~~-~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~---------~--~~~~~ 634 (786)
.|-...... ....+. .....|..|+.- ..+. +.-..+|.|+.|-....- . .....
T Consensus 92 ~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G--~~h~-~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~ 168 (406)
T 4d9s_A 92 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG--DSHC-LAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 168 (406)
T ss_dssp EEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEE-EEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECG
T ss_pred EEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC--hhhe-EEEcCCCcEEEeCCCCCccCCCCCCCCcccceEec
Confidence 994322110 001111 122356666653 2333 345678999999654311 0 01111
Q ss_pred ----CCeEEEEEeCCCCEEEEEECCCeEEEEEcCCC----------cEE-EEEec-CCCCEEEEEEcCCCCEEEEEeCC-
Q 044075 635 ----GGTVQVRFQPRLGLLLAAASENVVSIFDVETD----------RLT-HSFKG-HSTEIHSVCWDTNGEYLASVSQD- 697 (786)
Q Consensus 635 ----~~i~~i~~sp~g~~Ll~gs~dg~I~iwD~~t~----------~~i-~~l~~-h~~~I~sv~~spdg~~Lasgs~D- 697 (786)
..+..+ .....+.++...+|.|+.|-.... ... ..+.. ....|..|+.. ..+.++...+
T Consensus 169 ~~~~~~i~~v--a~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G 244 (406)
T 4d9s_A 169 AFEGIRIKMV--AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSG 244 (406)
T ss_dssp GGTTCCEEEE--EECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTC
T ss_pred ccCCCcEEEE--ecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCC
Confidence 133333 334456777788999999964321 111 11111 12345555532 2333334445
Q ss_pred eEEEEECCCC----------e-eEEEEcc-CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC----------e--EEE
Q 044075 698 SVRVWSLASG----------E-CIHELSS-SGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN----------K--CMT 753 (786)
Q Consensus 698 ~I~vwDl~s~----------~-~i~~l~~-~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~----------~--~~~ 753 (786)
.|+.|-.... . ....+.. ....|..++.- ..+.++...+|.|+.|-.... . ...
T Consensus 245 ~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~ 322 (406)
T 4d9s_A 245 ALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG--WRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQ 322 (406)
T ss_dssp CEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEE
T ss_pred CEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEec--CCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEE
Confidence 7888754321 1 1111211 22345555443 446677788999999964431 1 112
Q ss_pred Ec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEe
Q 044075 754 IA-AHDCVISALAQSPVTGMVASASHDKSVKIW 785 (786)
Q Consensus 754 ~~-~h~~~V~slafspdg~~LaSgs~DG~I~IW 785 (786)
+. .....|..|+... ...+.-..||.|..|
T Consensus 323 v~~~~~~~v~~va~G~--~hs~alt~~G~v~~w 353 (406)
T 4d9s_A 323 VRFPDDQKVVQVSCGW--RHTLAVTERNNVFAW 353 (406)
T ss_dssp ECCGGGCCEEEEEECS--SEEEEEETTSCEEEE
T ss_pred EeccCCCcEEEEEeCC--CeEEEEeCCCCEEEe
Confidence 21 2334577776543 344445678888887
No 396
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=27.30 E-value=4.7e+02 Score=25.92 Aligned_cols=141 Identities=8% Similarity=-0.041 Sum_probs=75.8
Q ss_pred CEEEEEECCCeEEEEEcCCCee-eeecCCCCCCeEEEEEccCCCEEEEEeCCCcEEEEcCC---CCc---cee---eeec
Q 044075 522 KLLASAGHDKKVVVWNMENFQT-ECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAA---KPN---FCL---QTYT 591 (786)
Q Consensus 522 ~~Lasgs~Dg~V~IWdl~t~~~-~~~l~~h~~~V~sl~fspdg~~Lasgs~Dg~I~VWdl~---s~~---~~~---~~~~ 591 (786)
..+++.+.+|.|+--....... ...+.... .+..+........|+..+..|.++-+.+. ... ..+ ..+.
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~lke~D-~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~ 81 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLNYKAGD-SFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP 81 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSCCCTTC-CEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC
T ss_pred CEEEEEeCCCEEEEeeCCcCCceeccCCCCC-EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC
Confidence 3456677788877666544321 11233333 44444444444456666778876655432 111 111 1122
Q ss_pred CCCCCeEEEEEecCCCeEEEEEcCCCcEEEEeCCCCe-------eeEeec--CCeEEEEEe-CCCCEEEEEECCCeEEEE
Q 044075 592 GHNNHVMSLDFHPKKNDLFCSCDGNSEIRFWNLSQYS-------CARISK--GGTVQVRFQ-PRLGLLLAAASENVVSIF 661 (786)
Q Consensus 592 ~h~~~V~sl~~sp~g~~ll~sgs~Dg~I~iwDl~~~~-------~~~~~~--~~i~~i~~s-p~g~~Ll~gs~dg~I~iw 661 (786)
....|.++....++.+++ .++..|.++...+.... ....++ +.+..+... ..+..++..+.+|.+..|
T Consensus 82 -~~e~Iv~~~~~~~~~~ll-l~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf 159 (256)
T 1zvt_A 82 -PGATVDHMLMESDDQKLL-MASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMF 159 (256)
T ss_dssp -TTCCEEEEECCCTTCEEE-EEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEE
T ss_pred -CCCEEEEEEEeCCCCEEE-EEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEE
Confidence 235677664433444444 67889999998875421 111111 233334444 345678888999998888
Q ss_pred EcCC
Q 044075 662 DVET 665 (786)
Q Consensus 662 D~~t 665 (786)
++..
T Consensus 160 ~~~e 163 (256)
T 1zvt_A 160 PVSD 163 (256)
T ss_dssp EGGG
T ss_pred EHHH
Confidence 8753
No 397
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=27.10 E-value=75 Score=37.08 Aligned_cols=37 Identities=16% Similarity=0.379 Sum_probs=30.0
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEEcCCCeeeeecCC
Q 044075 511 KVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDD 549 (786)
Q Consensus 511 ~V~~lafSpdg~~Lasgs~Dg~V~IWdl~t~~~~~~l~~ 549 (786)
.|.|+.+. ..+|++-+.|+++|+||+.++.++.+..-
T Consensus 223 ~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 46666554 67999999999999999999998876644
No 398
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=26.44 E-value=7.9e+02 Score=28.27 Aligned_cols=59 Identities=14% Similarity=0.219 Sum_probs=34.8
Q ss_pred CeEEEEEccCC-CEEEEEeCCCcEEEEcCCCCcceeeeecCC-------CCCeEEEEEecCC-CeEEEEE
Q 044075 553 IITDVRFRPNS-TQLATSSFDKTVRIWDAAKPNFCLQTYTGH-------NNHVMSLDFHPKK-NDLFCSC 613 (786)
Q Consensus 553 ~V~sl~fspdg-~~Lasgs~Dg~I~VWdl~s~~~~~~~~~~h-------~~~V~sl~~sp~g-~~ll~sg 613 (786)
.|..|+++|.. ..++++...+.|..++-.... -..+..+ ...|.+|+++|.. +.+++++
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~t--W~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTET--WIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTE--EEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCC--EEECcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 79999999953 456667666666555422222 1112111 2458999999854 4455444
No 399
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=23.86 E-value=3.4e+02 Score=23.12 Aligned_cols=26 Identities=12% Similarity=0.045 Sum_probs=15.2
Q ss_pred EEEEEcCCCCEEEEEeCCeEEEEECCC
Q 044075 680 HSVCWDTNGEYLASVSQDSVRVWSLAS 706 (786)
Q Consensus 680 ~sv~~spdg~~Lasgs~D~I~vwDl~s 706 (786)
..+.+..+|.+++....+.+ +|...+
T Consensus 59 ~~l~l~~dGNLVl~d~~~~~-iW~S~t 84 (113)
T 3mez_B 59 CFMRLGHSGELDITDDRLNT-VFVSNT 84 (113)
T ss_dssp CEEEECTTSCEEEECTTSCE-EEECSC
T ss_pred EEEEEeCCCcEEEECCCCCE-EEECCC
Confidence 35667778877765433333 676543
No 400
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=22.27 E-value=8.7e+02 Score=27.33 Aligned_cols=267 Identities=8% Similarity=0.036 Sum_probs=0.0
Q ss_pred cCCCCeEEEEEcCCCCE-EEEEECCCe----------------------------EEEEEcCCCeeeeecCCCCCC----
Q 044075 507 KSSSKVTCCHFSSDGKL-LASAGHDKK----------------------------VVVWNMENFQTECTPDDHNHI---- 553 (786)
Q Consensus 507 ~H~~~V~~lafSpdg~~-Lasgs~Dg~----------------------------V~IWdl~t~~~~~~l~~h~~~---- 553 (786)
.|-..+....|.-||+. |++...+|+ |.|+|=.+++.+.++.-....
T Consensus 176 a~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEyL~vfdG~TG~~l~~~~~~p~rg~~~ 255 (591)
T 2zux_A 176 AHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTANFEPARGNVS 255 (591)
T ss_dssp TTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEECSSCCCCGG
T ss_pred cccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcEEEEEeCCCCCEEecccCCCCCCccc
Q ss_pred -------------eEEEEEcc-CCCEEEEEe---CCCcEEEEcCCCCcc-eeeeecCCC-----------CCeEEEEEec
Q 044075 554 -------------ITDVRFRP-NSTQLATSS---FDKTVRIWDAAKPNF-CLQTYTGHN-----------NHVMSLDFHP 604 (786)
Q Consensus 554 -------------V~sl~fsp-dg~~Lasgs---~Dg~I~VWdl~s~~~-~~~~~~~h~-----------~~V~sl~~sp 604 (786)
..++++.. +...++.+- ....|..||...++. ....+.... ..+.-..+.-
T Consensus 256 ~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDg 335 (591)
T 2zux_A 256 DWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDG 335 (591)
T ss_dssp GGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSS
T ss_pred ccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCC
Q ss_pred CCCeEEEEEc----CCCcEEEEeCCCCeeeEeecCCeEEEEEeCC--CCEEEEEECC----CeEEEEEcCCCcEEEEEec
Q 044075 605 KKNDLFCSCD----GNSEIRFWNLSQYSCARISKGGTVQVRFQPR--LGLLLAAASE----NVVSIFDVETDRLTHSFKG 674 (786)
Q Consensus 605 ~g~~ll~sgs----~Dg~I~iwDl~~~~~~~~~~~~i~~i~~sp~--g~~Ll~gs~d----g~I~iwD~~t~~~i~~l~~ 674 (786)
+|..-|+.++ .||++ +|.... .+-.......|.|+ +-.++.+.++ .-..++|..+++.+.....
T Consensus 336 DG~dEIv~Gs~~iD~dG~~-L~st~~-----gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~ 409 (591)
T 2zux_A 336 DGKDEIIFGSMAVDHDGKG-MYSTGL-----GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYA 409 (591)
T ss_dssp SSSCEEEETTEEECTTSCE-EEECSC-----CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECC
T ss_pred CCCceEEEeeeEECCCCCE-eeeCCC-----CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCC
Q ss_pred --CCCCEEEEEEcCCCCEEEEEeCCeEEEEECCCCeeEEEEccCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC---
Q 044075 675 --HSTEIHSVCWDTNGEYLASVSQDSVRVWSLASGECIHELSSSGNKFHSCIFHPSYPTLMVIGGYQSLELWNMAEN--- 749 (786)
Q Consensus 675 --h~~~I~sv~~spdg~~Lasgs~D~I~vwDl~s~~~i~~l~~~~~~I~sv~fspdg~~L~sgs~dg~I~IwDl~~~--- 749 (786)
+.+......|.|+..-+=+-+ .-.+|+.+....-.. .....-..+-|..+...-+.-+. .|.-|+...+
T Consensus 410 ~~d~Gr~~~~Didp~~pG~E~w~--~~~l~~~~G~~i~~~--~p~~~N~~i~WdGDl~relld~~--~i~k~~~~~~~~~ 483 (591)
T 2zux_A 410 GKDVGRGMAADIDPRYPGQEVWA--NGSLYSAKGVKIGSG--VPSSTNFGIWWDGDLLREQLDSN--RIDKWDYQNGVSK 483 (591)
T ss_dssp SSCCCCEEEECCCTTSSSCEEEE--TTEEECTTSCBCSSC--CCSCCSEEECCSSSSSCEEEETT--EEEEEETTTTEEE
T ss_pred CCCCCceeEEecCCCCCceEEEe--cCceECCCCCEecCC--CCCCcceeEEECCCCcHhhhCCc--eEEecccCCCcee
Q ss_pred eEEEEcc-------cCCCeEEEEEcCCCC--EEEEEeCCCcEEEe
Q 044075 750 KCMTIAA-------HDCVISALAQSPVTG--MVASASHDKSVKIW 785 (786)
Q Consensus 750 ~~~~~~~-------h~~~V~slafspdg~--~LaSgs~DG~I~IW 785 (786)
.+++..+ ...+..+..+.-|.+ +|+-...+..++||
T Consensus 484 ~l~~~~g~~snngtk~~P~l~aDi~GDwREEvI~~t~D~~~LrIY 528 (591)
T 2zux_A 484 NMLTASGAAANNGTKATPTLQADLLGDWREEVVWRTEDSSALRIY 528 (591)
T ss_dssp EEEECTTEECBSGGGCBCSEEECCSSSSSCEEEEEETTSSEEEEE
T ss_pred EEEeecccccCCCCCCCEeeEEeccccCeeEEEEEeCCCCeEEEE
Done!