BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044084
(343 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297738294|emb|CBI27495.3| unnamed protein product [Vitis vinifera]
Length = 552
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/355 (67%), Positives = 292/355 (82%), Gaps = 16/355 (4%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S + Y++MKSAG+V +S Y +IMEA+ KI D EKV LF E ESRK+D +P ST +Y+
Sbjct: 142 STIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYR 201
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
ILC+SLGK GRAFE L+FFRDM +KGILED +VY+SLICSFASI EVKVAEELF+EAEEK
Sbjct: 202 ILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEK 261
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+LRD EVFLKLVLMY+EEG++E+TLE+V++MKN E+ +SDCI C IVNGF+K+R AA
Sbjct: 262 KILRDPEVFLKLVLMYVEEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAA 321
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
KVY++LI QGC PGQVTYASIIN YCR+ LYSKAE VF EM++KGF+KCVVAYSSMV M
Sbjct: 322 AKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVM 381
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------- 291
YGKTGR+R+AMRLVAKMK +GCEPNVW+YNSLMDMHGR KNLRQ+EK
Sbjct: 382 YGKTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPD 441
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YT+VISAY+ A +F+ C++FY+EFRMNGGVIDR +AGIMVG+FSK +++EL
Sbjct: 442 RVSYTSVISAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDEL 496
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 138/306 (45%), Gaps = 36/306 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ M GI+ DS Y ++ +F I + + LF E E +K+ P ++
Sbjct: 217 LEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLM 276
Query: 67 CDSLGKSGRAFEILKFFRDM-----------------KEKGILEDPSVYASLI------- 102
G R EI+K +++ K++G+ VY LI
Sbjct: 277 YVEEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPG 336
Query: 103 -CSFASIAEV-------KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
++ASI V AE +F E E+KG + + + +V+MY + G + + + +V
Sbjct: 337 QVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVA 396
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MK + + +++ + + K+++++ + +P +V+Y S+I+AY + G
Sbjct: 397 KMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAG 456
Query: 215 LYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
+ + + E + G D+ + MV ++ K+GR+ + ++L+ MK +G + +
Sbjct: 457 DFETCMRFYHEFRMNGGVIDRVIAGI--MVGIFSKSGRVDELVKLLQDMKTEGTGLDERL 514
Query: 273 YNSLMD 278
Y S ++
Sbjct: 515 YRSALN 520
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 103/237 (43%), Gaps = 12/237 (5%)
Query: 50 SRKLDLTPSSTHM-YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICS-FAS 107
R + L H+ +KIL D +++ D++ + +C F
Sbjct: 6 PRVISLVADRIHIHWKILEDKESTHDHHLPVIEL--DVELPDLTPKDENLNDFLCGLFRD 63
Query: 108 IAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI 167
++A + +++ +E+ R + L+ ++ I + + + ES+ + +D +
Sbjct: 64 PRSEELAFDYYQKVKERPEFRPDKETLERIIRLISSCIRARKFRITESLLEV-FSYNDDV 122
Query: 168 SCVIVN----GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
+ ++ N G++K + + + VY+++ S G +P +Y I+ AY +I Y K +F
Sbjct: 123 ALLVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLF 182
Query: 224 IEMQQKGFDKCVVA---YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
E + + D + Y + GK GR +A+ M KG + +Y+SL+
Sbjct: 183 QEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLI 239
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 5/166 (3%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK+GR E ++ MKE+G + VY SL+ + ++ E+L+KE + K ++ D
Sbjct: 383 GKTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDR 442
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y + G E + + I I+ ++V FSK VK+ +
Sbjct: 443 VSYTSVISAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQD 502
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ ++G + Y S +NA GL +A + Q+ FD V
Sbjct: 503 MKTEGTGLDERLYRSALNALRDAGLQMQARWL-----QESFDTTFV 543
>gi|225425981|ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 603
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/355 (67%), Positives = 292/355 (82%), Gaps = 16/355 (4%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S + Y++MKSAG+V +S Y +IMEA+ KI D EKV LF E ESRK+D +P ST +Y+
Sbjct: 204 STIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYR 263
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
ILC+SLGK GRAFE L+FFRDM +KGILED +VY+SLICSFASI EVKVAEELF+EAEEK
Sbjct: 264 ILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEK 323
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+LRD EVFLKLVLMY+EEG++E+TLE+V++MKN E+ +SDCI C IVNGF+K+R AA
Sbjct: 324 KILRDPEVFLKLVLMYVEEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAA 383
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
KVY++LI QGC PGQVTYASIIN YCR+ LYSKAE VF EM++KGF+KCVVAYSSMV M
Sbjct: 384 AKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVM 443
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------- 291
YGKTGR+R+AMRLVAKMK +GCEPNVW+YNSLMDMHGR KNLRQ+EK
Sbjct: 444 YGKTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPD 503
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YT+VISAY+ A +F+ C++FY+EFRMNGGVIDR +AGIMVG+FSK +++EL
Sbjct: 504 RVSYTSVISAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDEL 558
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 138/306 (45%), Gaps = 36/306 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ M GI+ DS Y ++ +F I + + LF E E +K+ P ++
Sbjct: 279 LEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLM 338
Query: 67 CDSLGKSGRAFEILKFFRDM-----------------KEKGILEDPSVYASLI------- 102
G R EI+K +++ K++G+ VY LI
Sbjct: 339 YVEEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPG 398
Query: 103 -CSFASIAEV-------KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
++ASI V AE +F E E+KG + + + +V+MY + G + + + +V
Sbjct: 399 QVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVA 458
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MK + + +++ + + K+++++ + +P +V+Y S+I+AY + G
Sbjct: 459 KMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAG 518
Query: 215 LYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
+ + + E + G D+ + MV ++ K+GR+ + ++L+ MK +G + +
Sbjct: 519 DFETCMRFYHEFRMNGGVIDRVIAGI--MVGIFSKSGRVDELVKLLQDMKTEGTGLDERL 576
Query: 273 YNSLMD 278
Y S ++
Sbjct: 577 YRSALN 582
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 104/233 (44%), Gaps = 15/233 (6%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEI-LKFFRDMKEKG-ILEDPSVYASLICSFASIAEV 111
DLTP ++ LC L + R+ E+ +++ +KE+ D +I +
Sbjct: 75 DLTPKDENLNDFLC-GLFRDPRSEELAFDYYQKVKERPEFRPDKETLERIIRYLIRSKKW 133
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
++ +F++ + D ++ +L I + + + ES+ + +D ++ ++
Sbjct: 134 GLSLLVFEDFKSFDAQLDGDICCRL----ISSCIRARKFRITESLLEV-FSYNDDVALLV 188
Query: 172 VN----GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
N G++K + + + VY+++ S G +P +Y I+ AY +I Y K +F E +
Sbjct: 189 FNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFE 248
Query: 228 QKGFDKCVVA---YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ D + Y + GK GR +A+ M KG + +Y+SL+
Sbjct: 249 SRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLI 301
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 5/162 (3%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK+GR E ++ MKE+G + VY SL+ + ++ E+L+KE + K ++ D
Sbjct: 445 GKTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDR 504
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y + G E + + I I+ ++V FSK VK+ +
Sbjct: 505 VSYTSVISAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQD 564
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+ ++G + Y S +NA GL +A + Q+ FD
Sbjct: 565 MKTEGTGLDERLYRSALNALRDAGLQMQARWL-----QESFD 601
>gi|297736068|emb|CBI24106.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/355 (66%), Positives = 292/355 (82%), Gaps = 16/355 (4%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S + Y++MKSAG+V +S Y +IMEA+ KI D EKV LF E ESRK+D +P ST +Y+
Sbjct: 128 STIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYR 187
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
ILC+SLGK GRAFE L+FFRDM +KGILED +VY+SLICSFASI EVKVAEELF+EAEEK
Sbjct: 188 ILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEK 247
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+LRD EVFLKLVLMY+EEG++E+T+E+V++MKN ++ +SDCI C IVNGF+K+R AA
Sbjct: 248 KILRDPEVFLKLVLMYVEEGLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAA 307
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
KVY++LI QGC PGQVTYASIIN YCR+ LYSKAE +F EM++KGF+KCVVAYSSMV M
Sbjct: 308 AKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVM 367
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------- 291
YGKTGR+R+AMRLVAKMK +GC+PNVW+YNSLMDMHGR KNLRQ+EK
Sbjct: 368 YGKTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPD 427
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YT+VISAY+ A +F+ C++FY+EFRMNGGVIDR +AGIMVG+FSK +++EL
Sbjct: 428 RVSYTSVISAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDEL 482
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 138/306 (45%), Gaps = 36/306 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ M GI+ DS Y ++ +F I + + LF E E +K+ P ++
Sbjct: 203 LEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLM 262
Query: 67 CDSLGKSGRAFEILKFFRDMK-----------------EKGILEDPSVYASLI------- 102
G R EI+K +++K ++G+ VY LI
Sbjct: 263 YVEEGLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPG 322
Query: 103 -CSFASIAEV-------KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
++ASI V AE +F E E+KG + + + +V+MY + G + + + +V
Sbjct: 323 QVTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVA 382
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MK + + +++ + + K+++++ + +P +V+Y S+I+AY + G
Sbjct: 383 KMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAG 442
Query: 215 LYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
+ + + E + G D+ + MV ++ K+GR+ + ++L+ MK +G + +
Sbjct: 443 DFETCMRFYHEFRMNGGVIDRVIAGI--MVGIFSKSGRVDELVKLLQDMKTEGTGLDERL 500
Query: 273 YNSLMD 278
Y S ++
Sbjct: 501 YRSALN 506
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
++A + +++ +E+ R + L+ ++ I + + + ES+ + +D ++ ++
Sbjct: 54 ELAFDYYQKVKERPEFRPDKETLERIIRLISSCIRARKFRITESLLEV-FSYNDDVALLV 112
Query: 172 VN----GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
N G++K + + + VY+++ S G +P +Y I+ AY +I Y K +F E +
Sbjct: 113 CNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFE 172
Query: 228 QKGFDKCVVA---YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ D + Y + GK GR +A+ M KG + +Y+SL+
Sbjct: 173 SRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLI 225
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK+GR E ++ MKE+G + VY SL+ + ++ E+L+KE + K ++ D
Sbjct: 369 GKTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDR 428
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y + G E + + I I+ ++V FSK VK+ +
Sbjct: 429 VSYTSVISAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQD 488
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ ++G + Y S +NA GL +A + Q+ FD V + +
Sbjct: 489 MKTEGTGLDERLYRSALNALRDAGLQMQARWL-----QESFDTKVYIFKT 533
>gi|359484961|ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 609
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/355 (66%), Positives = 292/355 (82%), Gaps = 16/355 (4%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S + Y++MKSAG+V +S Y +IMEA+ KI D EKV LF E ESRK+D +P ST +Y+
Sbjct: 205 STIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYR 264
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
ILC+SLGK GRAFE L+FFRDM +KGILED +VY+SLICSFASI EVKVAEELF+EAEEK
Sbjct: 265 ILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEK 324
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+LRD EVFLKLVLMY+EEG++E+T+E+V++MKN ++ +SDCI C IVNGF+K+R AA
Sbjct: 325 KILRDPEVFLKLVLMYVEEGLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAA 384
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
KVY++LI QGC PGQVTYASIIN YCR+ LYSKAE +F EM++KGF+KCVVAYSSMV M
Sbjct: 385 AKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVM 444
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------- 291
YGKTGR+R+AMRLVAKMK +GC+PNVW+YNSLMDMHGR KNLRQ+EK
Sbjct: 445 YGKTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPD 504
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YT+VISAY+ A +F+ C++FY+EFRMNGGVIDR +AGIMVG+FSK +++EL
Sbjct: 505 RVSYTSVISAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDEL 559
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 138/306 (45%), Gaps = 36/306 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ M GI+ DS Y ++ +F I + + LF E E +K+ P ++
Sbjct: 280 LEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLM 339
Query: 67 CDSLGKSGRAFEILKFFRDMK-----------------EKGILEDPSVYASLI------- 102
G R EI+K +++K ++G+ VY LI
Sbjct: 340 YVEEGLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPG 399
Query: 103 -CSFASIAEV-------KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
++ASI V AE +F E E+KG + + + +V+MY + G + + + +V
Sbjct: 400 QVTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVA 459
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MK + + +++ + + K+++++ + +P +V+Y S+I+AY + G
Sbjct: 460 KMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAG 519
Query: 215 LYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
+ + + E + G D+ + MV ++ K+GR+ + ++L+ MK +G + +
Sbjct: 520 DFETCMRFYHEFRMNGGVIDRVIAGI--MVGIFSKSGRVDELVKLLQDMKTEGTGLDERL 577
Query: 273 YNSLMD 278
Y S ++
Sbjct: 578 YRSALN 583
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 105/233 (45%), Gaps = 15/233 (6%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEI-LKFFRDMKEKG-ILEDPSVYASLICSFASIAEV 111
DLTP ++ LC L + R+ E+ +++ +KE+ D +I +
Sbjct: 76 DLTPKDENLNDFLC-GLFRDPRSEELAFDYYQKVKERPEFRPDKETLERIIRYLIRSKKW 134
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
++ +F++ + + D ++ +L I + + + ES+ + +D ++ ++
Sbjct: 135 GLSLLVFEDFKSFDVQLDGDICCRL----ISSCIRARKFRITESLLEV-FSYNDDVALLV 189
Query: 172 VN----GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
N G++K + + + VY+++ S G +P +Y I+ AY +I Y K +F E +
Sbjct: 190 CNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFE 249
Query: 228 QKGFDKCVVA---YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ D + Y + GK GR +A+ M KG + +Y+SL+
Sbjct: 250 SRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLI 302
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK+GR E ++ MKE+G + VY SL+ + ++ E+L+KE + K ++ D
Sbjct: 446 GKTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDR 505
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y + G E + + I I+ ++V FSK VK+ +
Sbjct: 506 VSYTSVISAYSKAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQD 565
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ ++G + Y S +NA GL +A + Q+ FD V +
Sbjct: 566 MKTEGTGLDERLYRSALNALRDAGLQMQARWL-----QESFDTKVYIF 608
>gi|224108157|ref|XP_002314741.1| predicted protein [Populus trichocarpa]
gi|222863781|gb|EEF00912.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/364 (67%), Positives = 294/364 (80%), Gaps = 25/364 (6%)
Query: 5 SKLHYY-------EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP 57
+KLH Y EKM AGI LDS CYCQIM+A+YK+GD+EKV ALF E ESRKLD P
Sbjct: 118 NKLHMYGSTISVHEKMILAGIPLDSRCYCQIMKAYYKLGDAEKVVALFNEFESRKLDSKP 177
Query: 58 S-STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
++KILC SLG+SG+AF+ L++ RDM++KGILED S+Y+SLICSFA+I EV+VAEE
Sbjct: 178 MILRQIFKILCLSLGRSGQAFQALEYSRDMRKKGILEDSSIYSSLICSFANIREVEVAEE 237
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK-NAELNISDCISCVIVNGF 175
LFKEA EK MLRD E+ L+LVLMYIEEG +EKT+E+V+ MK A L +SDCI C IVNGF
Sbjct: 238 LFKEALEKRMLRDPEIVLRLVLMYIEEGQMEKTIEIVKVMKGTANLKVSDCIFCAIVNGF 297
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
SKRR + AAVKVYE+L GC PGQVTYAS+INAYCR GLYSKAE VF EM++KGFDKCV
Sbjct: 298 SKRRGFSAAVKVYEELKYDGCDPGQVTYASVINAYCRAGLYSKAEMVFSEMEEKGFDKCV 357
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---- 291
VAYSSM++MYGKTGR RDA RLVAKMK KGCEPNVWIYNSL+DMHGRAKNLRQ+EK
Sbjct: 358 VAYSSMISMYGKTGRARDATRLVAKMKLKGCEPNVWIYNSLLDMHGRAKNLRQVEKLWKE 417
Query: 292 ------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
Y++VISAYN ++E++MCV++Y+E+R+NGGVID AMAGIM GVFSK+S+
Sbjct: 418 MKRRKVAPDKVTYSSVISAYNKSKEYEMCVRYYHEYRINGGVIDGAMAGIMAGVFSKISR 477
Query: 340 IEEL 343
I+EL
Sbjct: 478 IDEL 481
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 100/257 (38%), Gaps = 44/257 (17%)
Query: 38 SEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
SE++A + + K + P + K+L L +S + +L D K+ + D
Sbjct: 17 SEELAYEYYKKAKEKPEFRPQRPVL-KLLIRYLIQSDKWGLVLSLADDFKKYNVFPDSFT 75
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+++L+ S K+ E L L + + K+ ++ + M
Sbjct: 76 FSTLVSSCIRARRFKIVENL---------LENFKSDSKIAVLAFDSAM------------ 114
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
G++K Y + + V+E++I G Y I+ AY ++G
Sbjct: 115 ---------------KGYNKLHMYGSTISVHEKMILAGIPLDSRCYCQIMKAYYKLGDAE 159
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAM----YGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
K +F E + + D + + + G++G+ A+ M+ KG + IY
Sbjct: 160 KVVALFNEFESRKLDSKPMILRQIFKILCLSLGRSGQAFQALEYSRDMRKKGILEDSSIY 219
Query: 274 NSLMDMHGRAKNLRQLE 290
+SL+ N+R++E
Sbjct: 220 SSLICSFA---NIREVE 233
>gi|224101979|ref|XP_002312498.1| predicted protein [Populus trichocarpa]
gi|222852318|gb|EEE89865.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/357 (65%), Positives = 293/357 (82%), Gaps = 18/357 (5%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMY 63
S L +EKMK AGI LDSGCY Q M+A +K+GD+E+V +F E ESRK+D P + MY
Sbjct: 12 STLSVHEKMKLAGIPLDSGCYFQTMKARHKLGDAERVVEMFNEFESRKIDSKPMILSQMY 71
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
KILC+SLG+SG+ FE L++FRDMK+KGILED S+Y+SLICS +I EVK+AEEL+KEA+E
Sbjct: 72 KILCESLGRSGQVFEALEYFRDMKKKGILEDSSMYSSLICSLVNIREVKLAEELYKEAQE 131
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK-NAELNISDCISCVIVNGFSKRRAYW 182
K ML+D E FLKLVL+Y+EEG +EKT+E+V+ MK A+L +SDCI C +VNGFSKRR +
Sbjct: 132 KRMLKDPETFLKLVLIYMEEGQMEKTVEIVKEMKGTAKLKVSDCIFCAVVNGFSKRRGFD 191
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AAVKVYE+L GC PGQVTYAS+INAYCR+GLYSKAE VF EM+ KGFDKCVVAYSS++
Sbjct: 192 AAVKVYEELKYDGCEPGQVTYASVINAYCRVGLYSKAEVVFFEMEAKGFDKCVVAYSSII 251
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------- 291
+MYGKTGR RDAMRLVAKMK KGC+PN WIYNSL+DMHGRAK+LR++EK
Sbjct: 252 SMYGKTGRPRDAMRLVAKMKLKGCQPNTWIYNSLVDMHGRAKDLRRVEKLWKEMKRRKVA 311
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YT++ISAY+ ++E++MCV+F++E+R+NGGVID A+AGIMVGVFSK+S+I+EL
Sbjct: 312 PDKVTYTSIISAYSKSKEYEMCVRFFHEYRINGGVIDGAIAGIMVGVFSKISRIDEL 368
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 86/222 (38%), Gaps = 40/222 (18%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE++K G Y ++ A+ ++G K +F E E++ D Y +
Sbjct: 197 YEELKYDGCEPGQVTYASVINAYCRVGLYSKAEVVFFEMEAKGFD---KCVVAYSSIISM 253
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK+GR + ++ MK KG + +Y SL+ +++ E+L+KE
Sbjct: 254 YGKTGRPRDAMRLVAKMKLKGCQPNTWIYNSLVDMHGRAKDLRRVEKLWKE--------- 304
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY- 188
MK ++ I++ +SK + Y V+ +
Sbjct: 305 --------------------------MKRRKVAPDKVTYTSIISAYSKSKEYEMCVRFFH 338
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
E I+ G I G + ++ + +I + K+ +M+ +G
Sbjct: 339 EYRINGGVIDGAIA-GIMVGVFSKISRIDELLKLLRDMKSEG 379
>gi|449530158|ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/356 (61%), Positives = 284/356 (79%), Gaps = 16/356 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S + ++++KSA I DSGCYC++MEA+ K+GDSE+V LF E ESR D TP ST +Y
Sbjct: 204 KSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRISDSTPFSTKIY 263
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
ILC+SL KSGR FE L+FFRDM++KGI ED ++Y++LIC+FASI EVK+AE+L+ EA+
Sbjct: 264 GILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAKA 323
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
K +LRD +FLKL+LMY+++G +EK LE+VE MK+ ++ +SDCI C IVNG++ RR Y A
Sbjct: 324 KKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEA 383
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AVKVYE+LI GC PGQVTYAS INAYCR+GLYSKAE +F EM++KGFDKCVVAYSS+++
Sbjct: 384 AVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVVAYSSLIS 443
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
MYGKTGR++DAMRL+AKMK KGC+PNVWIYN LM+MHG+AKNL+Q+EK
Sbjct: 444 MYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAP 503
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YT++ISAY A EF+ C ++Y EFRMNGG ID+A GIMVGVFSK S+++EL
Sbjct: 504 DKVSYTSIISAYVKASEFEKCEQYYREFRMNGGTIDKAFGGIMVGVFSKTSRVDEL 559
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 3/211 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YEK+ G Y + A+ ++G K +F E E + D Y L
Sbjct: 388 YEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKGFD---KCVVAYSSLISM 444
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK+GR + ++ MKEKG + +Y L+ +K E+L+KE + K + D
Sbjct: 445 YGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPD 504
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ Y++ EK + + I ++V FSK VK+
Sbjct: 505 KVSYTSIISAYVKASEFEKCEQYYREFRMNGGTIDKAFGGIMVGVFSKTSRVDELVKLLR 564
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
+ +G + Y + +NA GL +A+
Sbjct: 565 DMKLEGTRLDERLYRTALNALMDAGLQVQAK 595
>gi|449466949|ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/356 (61%), Positives = 283/356 (79%), Gaps = 16/356 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S + ++++KSA I DSGCYC++MEA+ K+GDSE+V LF E ESR TP ST +Y
Sbjct: 204 KSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRISVSTPFSTKIY 263
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
ILC+SL KSGR FE L+FFRDM++KGI ED ++Y++LIC+FASI EVK+AE+L+ EA+
Sbjct: 264 GILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAKA 323
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
K +LRD +FLKL+LMY+++G +EK LE+VE MK+ ++ +SDCI C IVNG++ RR Y A
Sbjct: 324 KKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEA 383
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AVKVYE+LI GC PGQVTYAS INAYCR+GLYSKAE +F EM++KGFDKCVVAYSS+++
Sbjct: 384 AVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVVAYSSLIS 443
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
MYGKTGR++DAMRL+AKMK KGC+PNVWIYN LM+MHG+AKNL+Q+EK
Sbjct: 444 MYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAP 503
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YT++ISAY A EF+ C ++Y EFRMNGG ID+A GIMVGVFSK S+++EL
Sbjct: 504 DKVSYTSIISAYVKASEFEKCEQYYREFRMNGGTIDKAFGGIMVGVFSKTSRVDEL 559
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 3/211 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YEK+ G Y + A+ ++G K +F E E + D Y L
Sbjct: 388 YEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKGFD---KCVVAYSSLISM 444
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK+GR + ++ MKEKG + +Y L+ +K E+L+KE + K + D
Sbjct: 445 YGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPD 504
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ Y++ EK + + I ++V FSK VK+
Sbjct: 505 KVSYTSIISAYVKASEFEKCEQYYREFRMNGGTIDKAFGGIMVGVFSKTSRVDELVKLLR 564
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
+ +G + Y + +NA GL +A+
Sbjct: 565 DMKLEGTRLDERLYRTALNALMDAGLQVQAK 595
>gi|356575210|ref|XP_003555735.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Glycine max]
Length = 609
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/364 (59%), Positives = 278/364 (76%), Gaps = 24/364 (6%)
Query: 3 SQSKLH-------YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDL 55
S +KLH +E+MKS+ +VLDS Y IMEA+ K+ + EKV LF E ESRKL
Sbjct: 202 SYNKLHMFRNTVLVFERMKSSNVVLDSRGYLHIMEAYSKLNECEKVVQLFREFESRKLRG 261
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
+ +Y ILC+SL + GRAFE L FF +M +KGI E S+Y+ LI SFAS+ EV VAE
Sbjct: 262 SSYLAQIYVILCESLARHGRAFEALDFFTEMAKKGISEY-SIYSKLIYSFASLREVVVAE 320
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
EL +EA+ K ++D EV+LKLV MYIEEG++EKTLEVV+ M++A++ +SDCI C +VNGF
Sbjct: 321 ELLREAKGKMTIKDPEVYLKLVHMYIEEGLLEKTLEVVKEMEDADVKVSDCILCTVVNGF 380
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
SK+R + AAVKV+E+LIS+G GQVTYAS+INAY R+G YSKAE+VF+EM+QKGFDKCV
Sbjct: 381 SKKRGFLAAVKVFEELISKGYESGQVTYASVINAYWRLGQYSKAEEVFLEMEQKGFDKCV 440
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---- 291
AYS+M+ MYG+TGR+R AM+LVAKMK +GC+PNVWIYNSL+DMHGR KNL+QLEK
Sbjct: 441 YAYSTMIVMYGRTGRVRSAMKLVAKMKERGCKPNVWIYNSLIDMHGRDKNLKQLEKLWKE 500
Query: 292 ------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
YT++I AY+ A EF+ CVKF+NE+RMNGG+IDRAMAGIMVGVFSK+
Sbjct: 501 MKRRRVAPDKVSYTSIIGAYSKAGEFETCVKFFNEYRMNGGLIDRAMAGIMVGVFSKVGL 560
Query: 340 IEEL 343
++EL
Sbjct: 561 VDEL 564
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 118/260 (45%), Gaps = 13/260 (5%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC---DSLGKSGRAF 77
D Y +++ + + G EK + E E + ++ ILC + K
Sbjct: 334 DPEVYLKLVHMYIEEGLLEKTLEVVKEMEDADVKVSDC------ILCTVVNGFSKKRGFL 387
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
+K F ++ KG YAS+I ++ + + AEE+F E E+KG + + + ++
Sbjct: 388 AAVKVFEELISKGYESGQVTYASVINAYWRLGQYSKAEEVFLEMEQKGFDKCVYAYSTMI 447
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
+MY G V +++V MK + I +++ + + K+++++ +
Sbjct: 448 VMYGRTGRVRSAMKLVAKMKERGCKPNVWIYNSLIDMHGRDKNLKQLEKLWKEMKRRRVA 507
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKTGRIRDAM 255
P +V+Y SII AY + G + K F E + G D+ + MV ++ K G + + +
Sbjct: 508 PDKVSYTSIIGAYSKAGEFETCVKFFNEYRMNGGLIDRAMAGI--MVGVFSKVGLVDELV 565
Query: 256 RLVAKMKPKGCEPNVWIYNS 275
+L+ MK +G + +Y S
Sbjct: 566 KLLQDMKAEGTRLDQRLYQS 585
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E++ S G Y ++ A++++G K +FLE E + D + Y +
Sbjct: 393 FEELISKGYESGQVTYASVINAYWRLGQYSKAEEVFLEMEQKGFD---KCVYAYSTMIVM 449
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G++GR +K MKE+G + +Y SLI +K E+L+KE + + + D
Sbjct: 450 YGRTGRVRSAMKLVAKMKERGCKPNVWIYNSLIDMHGRDKNLKQLEKLWKEMKRRRVAPD 509
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ Y + G E ++ + I ++ ++V FSK VK+ +
Sbjct: 510 KVSYTSIIGAYSKAGEFETCVKFFNEYRMNGGLIDRAMAGIMVGVFSKVGLVDELVKLLQ 569
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKA 219
+ ++G Q Y S NA+ GL +A
Sbjct: 570 DMKAEGTRLDQRLYQSAWNAFKDAGLQIQA 599
>gi|356521196|ref|XP_003529243.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Glycine max]
Length = 601
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/364 (59%), Positives = 279/364 (76%), Gaps = 24/364 (6%)
Query: 3 SQSKLH-------YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDL 55
S +KLH +E+++S+ +VLDS Y IMEA+ K+ + EKV LF E ESRKL
Sbjct: 194 SYNKLHMFRNTVLVFERIRSSNVVLDSRGYLHIMEAYSKLNECEKVVQLFREFESRKLRG 253
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
+Y+ILC+SL + GRA E L +FR+M +KGI E S+Y+ LI SFAS+ EV VAE
Sbjct: 254 PTCLAQIYEILCESLARCGRASEALDYFREMTKKGISEY-SIYSKLIYSFASLGEVDVAE 312
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
EL +EA+ K ++D EV+LKLV MYIEEG++EKTLEVV+ M++A++ +SDCI C +VNGF
Sbjct: 313 ELVREAKGKTTIKDPEVYLKLVHMYIEEGLLEKTLEVVKEMEDADVKVSDCILCTVVNGF 372
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
SK+R + AAVKV+E+LIS+G PGQVTYAS+INAY R+G YSKAE+VF+EM+QKGFDKCV
Sbjct: 373 SKKRGFSAAVKVFEELISKGNEPGQVTYASVINAYWRLGQYSKAEEVFLEMEQKGFDKCV 432
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---- 291
AYS+M+ MYG+TGR+R AM+LVAKMK +GC+PNVWIYNSL+DMHGR KNL+QLEK
Sbjct: 433 YAYSTMIVMYGRTGRVRSAMKLVAKMKERGCKPNVWIYNSLIDMHGRDKNLKQLEKLWKE 492
Query: 292 ------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
YT++I AY+ A EF+ CVK +NE+RMNGG+IDRA+AGIMVGVFSK+ Q
Sbjct: 493 MKRRRVAPDKVSYTSIIGAYSKAGEFETCVKLFNEYRMNGGLIDRALAGIMVGVFSKVGQ 552
Query: 340 IEEL 343
++EL
Sbjct: 553 VDEL 556
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 13/267 (4%)
Query: 14 KSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG-- 71
K + D Y +++ + + G EK + E E + ++ ILC +
Sbjct: 319 KGKTTIKDPEVYLKLVHMYIEEGLLEKTLEVVKEMEDADVKVSDC------ILCTVVNGF 372
Query: 72 KSGRAFEI-LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
R F +K F ++ KG YAS+I ++ + + AEE+F E E+KG + +
Sbjct: 373 SKKRGFSAAVKVFEELISKGNEPGQVTYASVINAYWRLGQYSKAEEVFLEMEQKGFDKCV 432
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +++MY G V +++V MK + I +++ + + K++++
Sbjct: 433 YAYSTMIVMYGRTGRVRSAMKLVAKMKERGCKPNVWIYNSLIDMHGRDKNLKQLEKLWKE 492
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKT 248
+ + P +V+Y SII AY + G + K+F E + G D+ + MV ++ K
Sbjct: 493 MKRRRVAPDKVSYTSIIGAYSKAGEFETCVKLFNEYRMNGGLIDRALAGI--MVGVFSKV 550
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNS 275
G++ + ++L+ MK +G + +Y S
Sbjct: 551 GQVDELVKLLQDMKTEGTRLDQRLYQS 577
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 3/210 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E++ S G Y ++ A++++G K +FLE E + D + Y +
Sbjct: 385 FEELISKGNEPGQVTYASVINAYWRLGQYSKAEEVFLEMEQKGFD---KCVYAYSTMIVM 441
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G++GR +K MKE+G + +Y SLI +K E+L+KE + + + D
Sbjct: 442 YGRTGRVRSAMKLVAKMKERGCKPNVWIYNSLIDMHGRDKNLKQLEKLWKEMKRRRVAPD 501
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ Y + G E +++ + I ++ ++V FSK VK+ +
Sbjct: 502 KVSYTSIIGAYSKAGEFETCVKLFNEYRMNGGLIDRALAGIMVGVFSKVGQVDELVKLLQ 561
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKA 219
+ ++G Q Y S NA+ GL +A
Sbjct: 562 DMKTEGTRLDQRLYQSAWNAFKDAGLQLQA 591
>gi|297807403|ref|XP_002871585.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317422|gb|EFH47844.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 609
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/357 (55%), Positives = 256/357 (71%), Gaps = 18/357 (5%)
Query: 5 SKLHYYEKMK-SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD-LTPSSTHM 62
S + ++++K S G+ GCYC+IMEA KIGD++KV LF E +S++L L S +
Sbjct: 191 STIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGDNQKVVELFQEVKSQRLSFLAKESGSI 250
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+C SL KSGRAFE L+ +MK+KGI E +Y+ LI +FA EV + E+LFKEA
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAG 310
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
K +L+D E+ LK+VLMY+ EG +E+TLEVV +M AEL ++DCI C IVNGF K+R +
Sbjct: 311 GKKLLKDPEMCLKVVLMYVREGKMERTLEVVAAMIKAELKVTDCILCAIVNGFCKQRGFA 370
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+KVYE + Q C GQVTYA INAYCR+ KAE +F EM +KGFDKCVVAYS+++
Sbjct: 371 EAIKVYEWAMKQECEAGQVTYAIAINAYCRLEQDDKAEMLFDEMVKKGFDKCVVAYSNIM 430
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------- 291
MYGKT R+ DA++L+AKMK +GC+PN+WIYNSL+DMHGRAK+LR+ EK
Sbjct: 431 DMYGKTQRLSDAVKLMAKMKQRGCKPNIWIYNSLIDMHGRAKDLRRAEKIWKEMKRAKVL 490
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YT++ISAYN A+E + CV+ Y EFRMN G IDRAMAGIMVGVFSK S+I+EL
Sbjct: 491 PDKVSYTSMISAYNRAKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDEL 547
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 127/306 (41%), Gaps = 36/306 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L E+MK GI S Y ++ AF + + LF E +KL P ++
Sbjct: 268 LEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM 327
Query: 67 CDSLGKSGRAFEILKFFRDM-----------------KEKGILEDPSVY----------- 98
GK R E++ K++G E VY
Sbjct: 328 YVREGKMERTLEVVAAMIKAELKVTDCILCAIVNGFCKQRGFAEAIKVYEWAMKQECEAG 387
Query: 99 ----ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
A I ++ + + AE LF E +KG + + + ++ MY + + ++++
Sbjct: 388 QVTYAIAINAYCRLEQDDKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTQRLSDAVKLMA 447
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MK + I +++ + + A K+++++ +P +V+Y S+I+AY R
Sbjct: 448 KMKQRGCKPNIWIYNSLIDMHGRAKDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRAK 507
Query: 215 LYSKAEKVFIE--MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
+ +++ E M + D+ + MV ++ KT RI + MRL+ MK +G + +
Sbjct: 508 ELERCVELYQEFRMNRGKIDRAMAGI--MVGVFSKTSRIDELMRLLQDMKVEGTRLDARL 565
Query: 273 YNSLMD 278
Y+S ++
Sbjct: 566 YSSALN 571
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 12/228 (5%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y + A+ ++ +K LF E + D Y + D GK+ R + +K
Sbjct: 391 YAIAINAYCRLEQDDKAEMLFDEMVKKGFD---KCVVAYSNIMDMYGKTQRLSDAVKLMA 447
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
MK++G + +Y SLI +++ AE+++KE + +L D + ++ Y
Sbjct: 448 KMKQRGCKPNIWIYNSLIDMHGRAKDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRAK 507
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+E+ +E+ + + I ++ ++V FSK +++ + + +G Y+
Sbjct: 508 ELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYS 567
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S +NA GL S+ I Q+ FD A + + Y T R
Sbjct: 568 SALNALRDAGLNSQ-----IRWLQESFD----AAQTSASRYSNTKNTR 606
>gi|42567830|ref|NP_196881.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75115356|sp|Q66GP4.1|PP379_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13770, chloroplastic; Flags: Precursor
gi|51536486|gb|AAU05481.1| At5g13770 [Arabidopsis thaliana]
gi|53850491|gb|AAU95422.1| At5g13770 [Arabidopsis thaliana]
gi|332004556|gb|AED91939.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/357 (55%), Positives = 257/357 (71%), Gaps = 18/357 (5%)
Query: 5 SKLHYYEKMK-SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD-LTPSSTHM 62
S + ++++K S G+ GCYC+IMEA KIG++ KV LF E +S++L L S +
Sbjct: 191 STIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSI 250
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+C SL KSGRAFE L+ +MK+KGI E +Y+ LI +FA EV + E+LFKEA
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAG 310
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
K +L+D E+ LK+VLMY+ EG +E TLEVV +M+ AEL ++DCI C IVNGFSK+R +
Sbjct: 311 GKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFA 370
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AVKVYE + + C GQVTYA INAYCR+ Y+KAE +F EM +KGFDKCVVAYS+++
Sbjct: 371 EAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIM 430
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------- 291
MYGKT R+ DA+RL+AKMK +GC+PN+WIYNSL+DMHGRA +LR+ EK
Sbjct: 431 DMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVL 490
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YT++ISAYN ++E + CV+ Y EFRMN G IDRAMAGIMVGVFSK S+I+EL
Sbjct: 491 PDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDEL 547
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D GK+ R + ++ MK++G + +Y SLI +++ AE+++KE +
Sbjct: 426 YSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMK 485
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+L D + ++ Y +E+ +E+ + + I ++ ++V FSK
Sbjct: 486 RAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRID 545
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+++ + + +G Y+S +NA GL S+ I Q+ FD + S
Sbjct: 546 ELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQ-----IRWLQESFDAAQTSTS 597
>gi|10177342|dbj|BAB10598.1| unnamed protein product [Arabidopsis thaliana]
Length = 563
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/357 (55%), Positives = 257/357 (71%), Gaps = 18/357 (5%)
Query: 5 SKLHYYEKMK-SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD-LTPSSTHM 62
S + ++++K S G+ GCYC+IMEA KIG++ KV LF E +S++L L S +
Sbjct: 145 STIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSI 204
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+C SL KSGRAFE L+ +MK+KGI E +Y+ LI +FA EV + E+LFKEA
Sbjct: 205 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAG 264
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
K +L+D E+ LK+VLMY+ EG +E TLEVV +M+ AEL ++DCI C IVNGFSK+R +
Sbjct: 265 GKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFA 324
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AVKVYE + + C GQVTYA INAYCR+ Y+KAE +F EM +KGFDKCVVAYS+++
Sbjct: 325 EAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIM 384
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------- 291
MYGKT R+ DA+RL+AKMK +GC+PN+WIYNSL+DMHGRA +LR+ EK
Sbjct: 385 DMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVL 444
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YT++ISAYN ++E + CV+ Y EFRMN G IDRAMAGIMVGVFSK S+I+EL
Sbjct: 445 PDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDEL 501
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D GK+ R + ++ MK++G + +Y SLI +++ AE+++KE +
Sbjct: 380 YSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMK 439
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+L D + ++ Y +E+ +E+ + + I ++ ++V FSK
Sbjct: 440 RAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRID 499
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+++ + + +G Y+S +NA GL S+ I Q+ FD + S
Sbjct: 500 ELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQ-----IRWLQESFDAAQTSTS 551
>gi|125549468|gb|EAY95290.1| hypothetical protein OsI_17116 [Oryza sativa Indica Group]
Length = 608
Score = 346 bits (888), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 170/356 (47%), Positives = 235/356 (66%), Gaps = 16/356 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S L YE+M++A + D+ Y +M A +G E VA+L + +S K + S Y
Sbjct: 206 RSTLLVYERMRAARLSRDADAYRAVMAACGALGKPEMVASLLKQYKSHKWYPSESCVETY 265
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+CD+LG++GRA + LK R+M+ GI + ++Y+S+I S A E AE+L+ EA +
Sbjct: 266 AIVCDALGRAGRASDALKCLREMEADGIAPNATIYSSIIRSLADAHESSAAEDLYNEAWK 325
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KGML D ++FLK+++M++E G VEKT+ V + M+ L ++DCI IVNGF KRR
Sbjct: 326 KGMLGDPDMFLKVIVMHVEAGRVEKTMGVAKDMRETGLRVTDCILSTIVNGFVKRRGLKP 385
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A++ Y++LI+ GC PGQVTYAS+IN YC++G +AE VF EM +GFDKCVVAY +M++
Sbjct: 386 AIRAYDKLIALGCEPGQVTYASVINVYCQLGRSDRAESVFSEMIDRGFDKCVVAYGNMIS 445
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
MYGK R DAMRL+A MK KGCEPN+W+YNSL+DMHGR N RQ EK
Sbjct: 446 MYGKISRASDAMRLLAVMKKKGCEPNIWVYNSLLDMHGRLGNSRQAEKIWKEMMRRKIQP 505
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YT +I+A+N + E D C+ Y EFR GG +D A+AG+MVGVFSK S+ EL
Sbjct: 506 DRISYTAIINAFNRSGELDRCMDLYQEFRETGGKVDTALAGLMVGVFSKCSRFNEL 561
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
YAS+I + + AE +F E ++G + + + ++ MY + + ++ M
Sbjct: 404 TYASVINVYCQLGRSDRAESVFSEMIDRGFDKCVVAYGNMISMYGKISRASDAMRLLAVM 463
Query: 157 K--NAELNISDCISCVIVNG-FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
K E NI S + ++G R A K++++++ + P +++Y +IINA+ R
Sbjct: 464 KKKGCEPNIWVYNSLLDMHGRLGNSRQ---AEKIWKEMMRRKIQPDRISYTAIINAFNRS 520
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
G + ++ E ++ G MV ++ K R + + L+ M+
Sbjct: 521 GELDRCMDLYQEFRETGGKVDTALAGLMVGVFSKCSRFNELIELLKDMQ 569
>gi|440577310|emb|CCI55317.1| PH01B001I13.13 [Phyllostachys edulis]
Length = 636
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 167/356 (46%), Positives = 236/356 (66%), Gaps = 16/356 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S + YE+M+ A + ++ Y +M A+ +G+ + VA+LF + +SRK + S Y
Sbjct: 200 RSTVLVYERMRGARLPPNAEAYHAVMAAYGALGEPDVVASLFKQYKSRKWYPSESCLETY 259
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+CD+LG+ GRA + LK R+M+ GI + ++Y+S I S A E AE+L+ EA +
Sbjct: 260 TIVCDTLGREGRALDALKCLREMEADGISPNATIYSSAIGSLADARETAAAEDLYHEARK 319
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
K ML D ++FLK+++M++E G+VEKTL V + M+ L ++DCI IVNGF KRR
Sbjct: 320 KEMLGDPDMFLKVIVMHVETGLVEKTLGVAKDMREIGLRVTDCILSTIVNGFVKRRGLKP 379
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A++ Y++L++ GC PGQVTYAS+IN YCR+G +AE +F EM +G+DKCVVAY +M++
Sbjct: 380 AIRAYDKLVALGCEPGQVTYASVINVYCRLGRSDRAESIFSEMIDRGYDKCVVAYGNMIS 439
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
MYGK R DAMRL+A MK KGCEPNVW+YNSL+DMHGR + RQ EK
Sbjct: 440 MYGKIRRASDAMRLLALMKQKGCEPNVWVYNSLLDMHGRLGDSRQAEKIWKEMMRRTVQP 499
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YT +ISA+N + E D C+ Y EFR GG +D+A+AG+M GVFSK S+ EL
Sbjct: 500 DRVSYTAIISAFNRSGELDRCMDLYQEFRETGGKVDKALAGLMAGVFSKCSRFNEL 555
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/228 (17%), Positives = 100/228 (43%), Gaps = 8/228 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + Y+K+ + G Y ++ + ++G S++ ++F E R D Y
Sbjct: 378 KPAIRAYDKLVALGCEPGQVTYASVINVYCRLGRSDRAESIFSEMIDRGYD---KCVVAY 434
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ GK RA + ++ MK+KG + VY SL+ + + + AE+++KE
Sbjct: 435 GNMISMYGKIRRASDAMRLLALMKQKGCEPNVWVYNSLLDMHGRLGDSRQAEKIWKEMMR 494
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + D + ++ + G +++ +++ + + + ++ ++ FSK +
Sbjct: 495 RTVQPDRVSYTAIISAFNRSGELDRCMDLYQEFRETGGKVDKALAGLMAGVFSKCSRFNE 554
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ + + + +G + Y S++N+ GL +V ++ Q F
Sbjct: 555 LIDLLKDMKLEGAKLDRRLYMSVLNSLREAGL-----EVHVKWLQSNF 597
>gi|297723401|ref|NP_001174064.1| Os04g0583150 [Oryza sativa Japonica Group]
gi|38346804|emb|CAE04154.2| OSJNBa0088A01.11 [Oryza sativa Japonica Group]
gi|125591406|gb|EAZ31756.1| hypothetical protein OsJ_15910 [Oryza sativa Japonica Group]
gi|215686818|dbj|BAG89668.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675722|dbj|BAH92792.1| Os04g0583150 [Oryza sativa Japonica Group]
Length = 606
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/356 (47%), Positives = 233/356 (65%), Gaps = 16/356 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S L YE+M++A + D+ Y +M A +G E VA+L + +S K + S Y
Sbjct: 204 RSTLLVYERMRAARLSRDADAYRAVMAACGALGKPEMVASLLKQYKSHKWYPSESCVETY 263
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+CD+LG++GRA + LK R+M+ GI + ++Y+S+I S A E AE+L+ EA +
Sbjct: 264 AIVCDALGRAGRASDALKCLREMEADGIAPNATIYSSIIRSLADAHESSAAEDLYNEAWK 323
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG L D ++FLK+++M++E G VEK + V + M+ L ++DCI IVNGF KRR
Sbjct: 324 KGRLGDPDMFLKVIVMHVEAGRVEKIMGVAKDMRETGLRVTDCILSTIVNGFVKRRGLKP 383
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A++ Y++LI+ GC PGQVTYAS+IN YC++G +AE VF EM +GFDKCVVAY +M++
Sbjct: 384 AIRAYDKLIALGCEPGQVTYASVINVYCQLGRSDRAESVFSEMIDRGFDKCVVAYGNMIS 443
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
MYGK R DAMRL+A MK KGCEPN+W+YNSL+DMHGR N RQ EK
Sbjct: 444 MYGKISRASDAMRLLAVMKKKGCEPNIWVYNSLLDMHGRLGNSRQAEKIWKEMMRRKIQP 503
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YT +I+A+N + E D C+ Y EFR GG +D A+AG+MVGVFSK S+ EL
Sbjct: 504 DRISYTAIINAFNRSGELDRCMDLYQEFRETGGKVDTALAGLMVGVFSKCSRFNEL 559
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
YAS+I + + AE +F E ++G + + + ++ MY + + ++ M
Sbjct: 402 TYASVINVYCQLGRSDRAESVFSEMIDRGFDKCVVAYGNMISMYGKISRASDAMRLLAVM 461
Query: 157 K--NAELNISDCISCVIVNG-FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
K E NI S + ++G R A K++++++ + P +++Y +IINA+ R
Sbjct: 462 KKKGCEPNIWVYNSLLDMHGRLGNSRQ---AEKIWKEMMRRKIQPDRISYTAIINAFNRS 518
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
G + ++ E ++ G MV ++ K R + + L+ M+
Sbjct: 519 GELDRCMDLYQEFRETGGKVDTALAGLMVGVFSKCSRFNELIELLKDMQ 567
>gi|357165438|ref|XP_003580383.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Brachypodium distachyon]
Length = 612
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/362 (44%), Positives = 232/362 (64%), Gaps = 23/362 (6%)
Query: 5 SKLHYY-------EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP 57
+KLH Y E+MK++ + +++ Y +M A+ +G+ + VA+LF + SRK +
Sbjct: 202 NKLHMYRSTVLLHERMKASCLSVNAEAYRAVMAAYGALGEPDTVASLFKQYRSRKWYPSE 261
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S Y I CD+LG++GRA + LK R+M+ GI D ++Y+S+I S A E+ +++L
Sbjct: 262 SCLEAYAIACDALGRAGRAVDALKCLREMEADGISPDAAIYSSVIGSLADAREMASSQDL 321
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+ EA K MLRD ++FLK+++M +E G++E TL V + M+ L ++DC+ IVNGF K
Sbjct: 322 YHEAWRKEMLRDPDMFLKVIIMQVEAGLLEDTLGVSKDMREIGLRVTDCVMSTIVNGFVK 381
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+R A++ Y++LI+ GC PGQVTYAS IN YCR+G +AE VF EM +GFDKCVVA
Sbjct: 382 KRGLKPAIRAYDKLIAMGCEPGQVTYASAINVYCRLGRSDRAEAVFSEMIDRGFDKCVVA 441
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------ 291
Y +M++MYG+ R DA RL+A MK KGCEPNVW+YNSL+DM G+ + RQ EK
Sbjct: 442 YGNMISMYGQIRRASDATRLLALMKQKGCEPNVWVYNSLLDMRGKLGDSRQAEKIWKEMV 501
Query: 292 ----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
YT +I A+N + E D C+ FY EFR G +D+ MA +MVGVF K S+
Sbjct: 502 RRKVQPDRISYTAIIGAFNRSGELDRCMNFYQEFRETGMKVDQTMASLMVGVFCKSSRFN 561
Query: 342 EL 343
EL
Sbjct: 562 EL 563
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/212 (17%), Positives = 90/212 (42%), Gaps = 3/212 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + Y+K+ + G Y + + ++G S++ A+F E R D Y
Sbjct: 386 KPAIRAYDKLIAMGCEPGQVTYASAINVYCRLGRSDRAEAVFSEMIDRGFD---KCVVAY 442
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ G+ RA + + MK+KG + VY SL+ + + + AE+++KE
Sbjct: 443 GNMISMYGQIRRASDATRLLALMKQKGCEPNVWVYNSLLDMRGKLGDSRQAEKIWKEMVR 502
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + D + ++ + G +++ + + + + + ++ ++V F K +
Sbjct: 503 RKVQPDRISYTAIIGAFNRSGELDRCMNFYQEFRETGMKVDQTMASLMVGVFCKSSRFNE 562
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
+++ + QG + Y ++N+ GL
Sbjct: 563 LIELLRDMKLQGIKLDRRLYMIVLNSLREAGL 594
>gi|195612318|gb|ACG27989.1| hypothetical protein [Zea mays]
Length = 603
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 211/325 (64%), Gaps = 16/325 (4%)
Query: 35 IGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
+G+ + VA+LF S K + S Y ++CD+LGK+GRA + L+ R+M+ G+ D
Sbjct: 232 LGEPDMVASLFKLYRSHKWYPSDSCVETYAVVCDALGKAGRALDALRSLREMEADGLSPD 291
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
++Y+S+I + A E AE+L+ EA ++ ML D ++FLKL +M+ E G+VE T+EV +
Sbjct: 292 AAIYSSVIGALADAREKAAAEDLYHEAWDRKMLGDPDMFLKLTIMHAEAGLVESTIEVAK 351
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M+ L ++DCI IVNGF KRR A++ Y++L+ GC PGQVTYAS+IN YCR+G
Sbjct: 352 DMRQIGLRVTDCILSTIVNGFVKRRGLKPAIRAYDKLVLIGCEPGQVTYASVINVYCRLG 411
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+AE +F EM ++GFD+CVVAY +M++MYGK R +A RL+A MK KGCEPNV +YN
Sbjct: 412 RSDRAEAIFSEMIERGFDRCVVAYGNMISMYGKIRRASEATRLLALMKQKGCEPNVLVYN 471
Query: 275 SLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMN 318
SL+DMHGR N +Q EK YT +I A N A E D C++ Y EFR
Sbjct: 472 SLLDMHGRLGNSKQAEKIWKEMLRRKVRPDRISYTAIILANNRAGELDRCMELYQEFRET 531
Query: 319 GGVIDRAMAGIMVGVFSKLSQIEEL 343
G +D+ MAG+MVGV SK S+ EL
Sbjct: 532 GRKVDKVMAGLMVGVLSKTSRFNEL 556
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 75/174 (43%), Gaps = 3/174 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + Y+K+ G Y ++ + ++G S++ A+F E R D Y
Sbjct: 379 KPAIRAYDKLVLIGCEPGQVTYASVINVYCRLGRSDRAEAIFSEMIERGFD---RCVVAY 435
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ GK RA E + MK+KG + VY SL+ + K AE+++KE
Sbjct: 436 GNMISMYGKIRRASEATRLLALMKQKGCEPNVLVYNSLLDMHGRLGNSKQAEKIWKEMLR 495
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+ + D + ++L G +++ +E+ + + + ++ ++V SK
Sbjct: 496 RKVRPDRISYTAIILANNRAGELDRCMELYQEFRETGRKVDKVMAGLMVGVLSK 549
>gi|226510065|ref|NP_001142291.1| uncharacterized protein LOC100274460 [Zea mays]
gi|194689130|gb|ACF78649.1| unknown [Zea mays]
gi|194708048|gb|ACF88108.1| unknown [Zea mays]
Length = 419
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 210/325 (64%), Gaps = 16/325 (4%)
Query: 35 IGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
+G+ + VA+LF S K + S Y ++CD+LGK+GRA + L+ R+M+ G+ D
Sbjct: 48 LGEPDMVASLFKLYRSHKWYPSDSCVETYGVVCDALGKAGRALDALRSLREMEADGLSPD 107
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
++Y+S+I + A E AE+L+ EA ++ ML D ++FLKL +M+ E G+VE T+EV +
Sbjct: 108 AAIYSSVIGALADAREKAAAEDLYHEAWDRKMLGDPDMFLKLTIMHAEAGLVESTIEVAK 167
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M+ L ++DCI IVNGF KRR A++ Y++L+ GC PGQVTYAS+IN YCR+G
Sbjct: 168 DMRQIGLRVTDCILSTIVNGFVKRRGLKPAIRAYDKLVLIGCEPGQVTYASVINVYCRLG 227
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+AE +F EM ++GFD+CVVAY +M++MYGK R +A RL+A MK KGCEPNV +YN
Sbjct: 228 RSDRAEAIFSEMIERGFDRCVVAYGNMISMYGKIRRASEATRLLALMKQKGCEPNVLVYN 287
Query: 275 SLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMN 318
SL+DMHGR N +Q EK YT +I A N A E D C++ Y EFR
Sbjct: 288 SLLDMHGRLGNSKQAEKIWKEMVRRKVRPDRISYTAIILANNRAGELDRCMELYQEFRET 347
Query: 319 GGVIDRAMAGIMVGVFSKLSQIEEL 343
G +D MAG+MVGV SK S+ EL
Sbjct: 348 GRKVDMVMAGLMVGVLSKTSRFNEL 372
>gi|414585751|tpg|DAA36322.1| TPA: hypothetical protein ZEAMMB73_184989 [Zea mays]
Length = 603
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 210/325 (64%), Gaps = 16/325 (4%)
Query: 35 IGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
+G+ + VA+LF S K + S Y ++CD+LGK+GRA + L+ R+M+ G+ D
Sbjct: 232 LGEPDMVASLFKLYRSHKWYPSDSCVETYGVVCDALGKAGRALDALRSLREMEADGLSPD 291
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
++Y+S+I + A E AE+L+ EA ++ ML D ++FLKL +M+ E G+VE T+EV +
Sbjct: 292 AAIYSSVIGALADAREKAAAEDLYHEAWDRKMLGDPDMFLKLTIMHAEAGLVESTIEVAK 351
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M+ L ++DCI IVNGF KRR A++ Y++L+ GC PGQVTYAS+IN YCR+G
Sbjct: 352 DMRQIGLRVTDCILSTIVNGFVKRRGLKPAIRAYDKLVLIGCEPGQVTYASVINVYCRLG 411
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+AE +F EM ++GFD+CVVAY +M++MYGK R +A RL+A MK KGCEPNV +YN
Sbjct: 412 RSDRAEAIFSEMIERGFDRCVVAYGNMISMYGKIRRASEATRLLALMKQKGCEPNVLVYN 471
Query: 275 SLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMN 318
SL+DMHGR N +Q EK YT +I A N A E D C++ Y EFR
Sbjct: 472 SLLDMHGRLGNSKQAEKIWKEMVRRKVRPDRISYTAIILANNRAGELDRCMELYQEFRET 531
Query: 319 GGVIDRAMAGIMVGVFSKLSQIEEL 343
G +D MAG+MVGV SK S+ EL
Sbjct: 532 GRKVDMVMAGLMVGVLSKTSRFNEL 556
>gi|255561711|ref|XP_002521865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538903|gb|EEF40501.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 449
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/325 (46%), Positives = 196/325 (60%), Gaps = 41/325 (12%)
Query: 38 SEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
+E +A + + + + + P M K+L L +S IL D + +L D +
Sbjct: 102 TEHLAYEYYKKATERQEFRPDKP-MLKLLIRYLMQSKNWDLILPVADDFNKYNVLPDSNT 160
Query: 98 YASLICSFASIAEVKVAEEL---FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
+ L+ S + ++ E L FK E +L F + Y + M T+ V E
Sbjct: 161 CSRLVYSCIKTRKFRIVESLLECFKCYSEIPVL----AFDSAMRGYNKLHMYSSTISVYE 216
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MK A + F Y +K Y+++ + G +VTYASIINAYCR G
Sbjct: 217 KMKAAGI-------------FMDSGGYCHIMKAYQKIGNTG----KVTYASIINAYCRTG 259
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
LYSKAE VF+EMQ KGFDKCVVAYSS+VAMYGKTGR RDAMRLVAKMK KGCEPNVWIYN
Sbjct: 260 LYSKAEMVFLEMQGKGFDKCVVAYSSIVAMYGKTGRTRDAMRLVAKMKVKGCEPNVWIYN 319
Query: 275 SLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMN 318
SL+DMHGR KNLRQ+EK YT+VI+AYN A+EF+ CV++Y+E+R N
Sbjct: 320 SLLDMHGRVKNLRQVEKLWKEMKRRKVAPDKVTYTSVIAAYNKAKEFETCVRYYHEYRFN 379
Query: 319 GGVIDRAMAGIMVGVFSKLSQIEEL 343
GGVID+A+AG+MVGVFSK+ +I+EL
Sbjct: 380 GGVIDKAVAGVMVGVFSKIGRIDEL 404
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 21/234 (8%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVA------------------ALFL 46
S + YEKMK+AGI +DSG YC IM+A+ KIG++ KV +FL
Sbjct: 210 STISVYEKMKAAGIFMDSGGYCHIMKAYQKIGNTGKVTYASIINAYCRTGLYSKAEMVFL 269
Query: 47 ECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFA 106
E + + D Y + GK+GR + ++ MK KG + +Y SL+
Sbjct: 270 EMQGKGFD---KCVVAYSSIVAMYGKTGRTRDAMRLVAKMKVKGCEPNVWIYNSLLDMHG 326
Query: 107 SIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC 166
+ ++ E+L+KE + + + D + ++ Y + E + + I
Sbjct: 327 RVKNLRQVEKLWKEMKRRKVAPDKVTYTSVIAAYNKAKEFETCVRYYHEYRFNGGVIDKA 386
Query: 167 ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
++ V+V FSK +K+ + + ++G Y S NA GL +A+
Sbjct: 387 VAGVMVGVFSKIGRIDELLKLLQDIKTEGTQLDGRLYRSAFNALRDAGLQMQAK 440
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 198/358 (55%), Gaps = 19/358 (5%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + Y+ ++K G++ DSG YC ++ A K+G+ +K E R+ + P
Sbjct: 109 NFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEM--REAGIKPDQV- 165
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL D GK+GR + FR+++ G L D Y +LI +FA + V A +FKEA
Sbjct: 166 AYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEA 225
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ L D +F ++ +Y + M ++ L V++ MK L ++ ++N F +
Sbjct: 226 QRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQP 285
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+K++E++ C G+ TY +++N Y + G +S AE++ +M+Q GF + VVAYS++
Sbjct: 286 MGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTL 345
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------- 291
+ MYGK G++++A RL + MK +GC+ N+ +YN+++DM+G+A + E+
Sbjct: 346 IDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKL 405
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YTT+I+AYN F+ C++ + + R +G +DR + IM+ V+ K Q +L
Sbjct: 406 VPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKL 463
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 2/228 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y ++ +GR +F MK G D +Y LI + A +
Sbjct: 56 PPDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMK 115
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
F + +++G+L D + ++ + G ++K E ++ M+ A + ++++ F
Sbjct: 116 YFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFG 175
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG-FDKCV 235
K + A + +L G +P V Y ++I+A+ ++G+ +A VF E Q+ D V
Sbjct: 176 KAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPV 235
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ Y +M+ +Y K A+ ++ MK G +PN Y S+++ RA
Sbjct: 236 IFY-TMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRA 282
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 112/259 (43%), Gaps = 3/259 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH + MK G+ + Y ++ AF + LF E + S+ Y +
Sbjct: 254 LHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGEST---YITM 310
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ K+G + M++ G + Y++LI + + +++ A LF +++G
Sbjct: 311 LNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGC 370
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+L V+ ++ MY + G + ++ +K+++L ++N +++ + ++
Sbjct: 371 KGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIR 430
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+EQ + G ++ A +IN Y + YSK ++ M + G ++V +Y
Sbjct: 431 VFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYE 490
Query: 247 KTGRIRDAMRLVAKMKPKG 265
G +A L+ K+ G
Sbjct: 491 DGGMCENAAELLRKINELG 509
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 39/209 (18%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
A EIL +M K D YA +I + + A+ F + + G D+ ++
Sbjct: 42 ALEIL--VDEMIGKNCPPDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNI 99
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
L+L Y KR + A+K + QL +G
Sbjct: 100 LILEY-----------------------------------GKRGNFSQAMKYFSQLKDEG 124
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
+P TY ++++A ++G K + EM++ G VAYS ++ M+GK GR DA
Sbjct: 125 LLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAA 184
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+++ G P+ YN+L +H AK
Sbjct: 185 ATFRELQMSGYLPDSVAYNTL--IHAFAK 211
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 81/178 (45%), Gaps = 17/178 (9%)
Query: 182 WAAVKVY-EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
W A+++ +++I + C P YA +I G + A+ F +M+ G +V Y+
Sbjct: 40 WVALEILVDEMIGKNCPPDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNI 99
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLEK-- 291
++ YGK G AM+ +++K +G P+ Y +++ + N L+++ +
Sbjct: 100 LILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAG 159
Query: 292 -------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ +I + A + + E +M+G + D ++ F+K+ +++
Sbjct: 160 IKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQ 217
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 184 AVKVYEQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+V+ Y+ + SQ G P Y + + R+ + E + EM K + Y+ ++
Sbjct: 7 SVEFYKWVKSQDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFYALVI 66
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTT-------- 294
TGR + A +KMK GC P++ IYN L+ +G+ N Q KY +
Sbjct: 67 KEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLL 126
Query: 295 --------VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
V+SA D + E R G D+ I++ +F K + E+
Sbjct: 127 PDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHED 182
>gi|118487846|gb|ABK95746.1| unknown [Populus trichocarpa]
Length = 184
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/138 (68%), Positives = 115/138 (83%), Gaps = 16/138 (11%)
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
VF EM++KGFDKCVVAYSSM++MYGKTGR RDA RLVAKMK KGCEPNVWIYNSL+DMHG
Sbjct: 2 VFSEMEEKGFDKCVVAYSSMISMYGKTGRARDATRLVAKMKLKGCEPNVWIYNSLLDMHG 61
Query: 282 RAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
RAKNLRQ+EK Y++VISAYN ++E++MCV++Y+E+R+NGGVID A
Sbjct: 62 RAKNLRQVEKLWKEMKRRKVAPDKVTYSSVISAYNKSKEYEMCVRYYHEYRINGGVIDGA 121
Query: 326 MAGIMVGVFSKLSQIEEL 343
MAGIM GVFSK+S+I+EL
Sbjct: 122 MAGIMAGVFSKISRIDEL 139
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 156/354 (44%), Gaps = 19/354 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q +++ M G+ + Y +M+AF K+G + LF E + R S Y
Sbjct: 152 QEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQ---PSVVTY 208
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL D+L +GR K F M G D Y++L+ V+ A ++F+E +
Sbjct: 209 NILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVD 268
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ DL + L+ + G +++ ++++ M + I++ K A
Sbjct: 269 RGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDA 328
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +V+ +++ GC P ++Y +I++Y R G ++A ++ EM + GF Y+S++
Sbjct: 329 AREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIH 388
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------RAKNLRQLEK------ 291
G++ +A ++ +M+ GC P+V YN LMDM G RA L Q K
Sbjct: 389 WLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEP 448
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
Y I D + + + + G +D+AM I++ + E
Sbjct: 449 DTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L G+SG+ ++ FR+MK KG D Y L+ + V+ A F
Sbjct: 103 YNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAML 162
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G+ ++ + L+ + + G ++ L + MK S ++++
Sbjct: 163 ERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVG 222
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AA K++ ++ GC P TY++++N + G +A KVF EM +G +V Y+S++
Sbjct: 223 AARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLL 282
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
A K G + +L+ +M KG P+ + +N++MD G+A
Sbjct: 283 ATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKA 323
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 6/283 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+K+ G LD Y ++ F + G + +F E K+ + + Y L ++
Sbjct: 88 YKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM---KIKGSEPDEYTYGFLVNA 144
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LGK+GR E FF M E+G+ + Y L+ +F + ++ +A LF E + +G
Sbjct: 145 LGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPS 204
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ G V ++ M + +VNG K A KV+
Sbjct: 205 VVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFR 264
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ +G V Y S++ + G + K+ EM +KGF ++++++ GK
Sbjct: 265 EMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKAN 324
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR---AKNLRQL 289
+ A + A+M GC+P++ YN L+D + R A RQ+
Sbjct: 325 KPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQM 367
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 128/281 (45%), Gaps = 3/281 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M + G L +++ A+ + S LF + ES +P+ H + L D L
Sbjct: 19 KEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAES--FACSPT-VHAFTKLIDIL 75
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
SG ++ + +KG D Y LI F ++ A E+F+E + KG D
Sbjct: 76 VNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDE 135
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ LV + G V++ ++M L + ++++ F K A+ ++ +
Sbjct: 136 YTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAE 195
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G P VTY +++A C G A K+F +M G YS++V GK+GR
Sbjct: 196 MKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGR 255
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ +A ++ +M +G ++ YNSL+ +A N+ ++ K
Sbjct: 256 VEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWK 296
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ + + A ++ Q S C P + +I+ G + +AE V+ ++ QKG
Sbjct: 36 LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-- 288
AY+ ++ +G++G++ AM + +MK KG EP+ + Y L++ G+A +++
Sbjct: 96 CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155
Query: 289 --------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ Y ++ A+ + DM + + E + G
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG 200
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 140/289 (48%), Gaps = 3/289 (1%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
SQ + E+M+ G D Y ++ K G++ K LF E + R P S
Sbjct: 165 SQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGR--KPDSI-T 221
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L D+LGK+GR + L+ +MKE+G+ Y +LI F + ++ A L E +
Sbjct: 222 FTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMK 281
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G D+ + L+ I+ +++ +V++ M+ ++NG K
Sbjct: 282 RNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLN 341
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++++ S+GC P VTY+++I A + A +F EM+ G + Y S++
Sbjct: 342 DAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSII 401
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ GK G++ DA RL ++M+ KG P+V YN+ ++ GR ++ K
Sbjct: 402 TVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARK 450
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 143/329 (43%), Gaps = 19/329 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +M+ G V D Y ++ K G + LF E R P T Y L
Sbjct: 99 LRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGC--VPD-TFTYNSL 155
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
LGK GR+ + ++ +M+ G D Y+SLI E A +LF+E + +G
Sbjct: 156 IYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGR 215
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D F L+ + G V+ LE+++ MK + ++ GF K A
Sbjct: 216 KPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYN 275
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ +++ GC P VTY+ +I + +A +V +M+++G + Y++++ G
Sbjct: 276 LLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLG 335
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR----------------QLE 290
K G + DA RL +MK KGC P+V Y++L+ G+A + L
Sbjct: 336 KAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLF 395
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y ++I+ A + D + ++E R G
Sbjct: 396 TYCSIITVLGKAGQVDDADRLFSEMRGKG 424
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 38/268 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M+S GI D YC I+ K G + LF E R L+P Y +S
Sbjct: 382 FEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLF--SEMRGKGLSPD-VITYNAFLNS 438
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ GR E K F DMKE G+L D + Y +L+ + EV A L KE E+G D
Sbjct: 439 LGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFD 498
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F + + + G V++ E+++ F+ + W
Sbjct: 499 SLKFDECLEILTSWGNVDEAHELLQ--------------------FANSKGLW------- 531
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
PG +Y ++I+A + G S+A +++++G +V+YSS+++ G+TG
Sbjct: 532 --------PGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTG 583
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+I A L+ +M +G + + Y++L+
Sbjct: 584 QIDTAFELLEEMSKRGLKLSPRSYSNLV 611
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 19/145 (13%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P VTY S++NA + G +A+ +F E++ + VV+YS ++ G+ G+ A+ +
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
VA+M+ KGC+PN+W YN+L+D G+A +FD ++ E R
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAG-------------------QFDEALRLLAEMRD 107
Query: 318 NGGVIDRAMAGIMVGVFSKLSQIEE 342
NG V D ++ K ++ E
Sbjct: 108 NGCVPDVRTYNCLISTLGKAGRLSE 132
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 95 PSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
P+V Y SL+ + A + + A+ LF+E + D+ + L+ G E LEV
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
V M+ + +V+ K + A+++ ++ GC+P TY +I+ +
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
G S+A +F EM+++G Y+S++ GK GR + AM L+ +M+ GC P+V
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 273 YNSLMDMHGR 282
Y+SL+ G+
Sbjct: 187 YSSLITGLGK 196
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 116/286 (40%), Gaps = 30/286 (10%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P T Y L + LGK+G + + F MK KG D Y++LI + A V+ A
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACV 380
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF+E E G+ DL + ++ + + G V+ + M+ L+ +N
Sbjct: 381 LFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLG 440
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG------ 230
+ + A K++E + G +P TY +++ + A + E+ ++G
Sbjct: 441 RGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSL 500
Query: 231 -FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA------ 283
FD+C+ +S G + +A L+ KG P YN+L+D +A
Sbjct: 501 KFDECLEILTSW-------GNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEA 553
Query: 284 -KNLRQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
L L++ Y+++ISA + D + E G
Sbjct: 554 FNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G E+ + E +K A+ ++N + + AA++V ++ ++GC P TY
Sbjct: 23 GQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTY 82
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
++++ + G + +A ++ EM+ G V Y+ +++ GK GR+ +A L A+M+
Sbjct: 83 NTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRE 142
Query: 264 KGCEPNVWIYNSL---MDMHGRAKN----LRQLEK---------YTTVISAYNMAREFDM 307
+GC P+ + YNSL + GR++ L ++E+ Y+++I+ E
Sbjct: 143 RGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVK 202
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
K + E + G D ++ K ++++
Sbjct: 203 AFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDD 237
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++N +K A ++E+L + P V+Y+ +IN+ R G + A +V EMQ KG
Sbjct: 15 LLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKG 74
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ Y+++V GK G+ +A+RL+A+M+ GC P+V YN L+ G+A L +
Sbjct: 75 CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSE 132
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M S I+ D+ Y ++ F+K+G F E S+K+ +P Y L G
Sbjct: 353 EMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI--SPDYI-TYTTLIQGFG 409
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G+ E F +M +G+ D Y +LI + E+ A L E + GM ++
Sbjct: 410 QGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIV 469
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + G ++ E+++ M+ L ++ CI +VNG K A+K+ +++
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM 529
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
G P +TY ++I+AYCR+G KA K+ EM +G VV ++ ++ + G +
Sbjct: 530 EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGML 589
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
D RL+ M KG P+ YN+LM H
Sbjct: 590 EDGDRLLGWMLEKGIVPDAITYNTLMKQH 618
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 150/342 (43%), Gaps = 19/342 (5%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
GI ++ Y I+ + ++G ++ L ++ + R TP Y + D G
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSS--TPDVVS-YSTVIDGYCHLGEL 309
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
+ LK DM+ KG+ + Y S+I I + AE++ +E + ++ D V+ L
Sbjct: 310 KKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ + + G V + + M + +++ ++ GF + ++ ++IS+G
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P +VTY ++I+ YC+ G A + EM Q G +V Y +++ K G + A
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYN 300
L+ +M+ KG + NV IYNS+++ +A N+ Q K YTTVI AY
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549
Query: 301 MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ D K E G +++ F L +E+
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED 591
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 38/305 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M S G+ D Y +++ + K G E V A L E ++ +TP+ Y L D
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAG--EMVNAFSLHNEMVQMGMTPNIV-TYGALIDG 477
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G + +M++KG+ + +Y S++ ++ A +L KE E G+ D
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF--------SKRRAY 181
+ ++ Y G ++K ++++ M + L + V++NGF R
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597
Query: 182 W---------------------------AAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
W K+Y+++ +QG P TY +I +C+
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A ++ EM +KG+ V +Y++++ + K +I +A L +M+ G + IYN
Sbjct: 658 NLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYN 717
Query: 275 SLMDM 279
+DM
Sbjct: 718 FFVDM 722
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 100/256 (39%), Gaps = 38/256 (14%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + ++M+ AGI D+ Y +++A+ ++GD +K L E R L T +
Sbjct: 518 NIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT-- 575
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ +L + G + + M EKGI+ D Y +L+ + +++K
Sbjct: 576 -FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRM 634
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ D + +++ G K R
Sbjct: 635 RNQGVAPDSNTY-----------------------------------NILIKGHCKARNL 659
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +Y+++I +G +P +Y ++I + + +A ++F EM+ G Y+
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFF 719
Query: 242 VAMYGKTGRIRDAMRL 257
V M + G + + L
Sbjct: 720 VDMCYEEGDVEITLNL 735
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M GIV D+ Y +M+ + I +S + R + P S + Y IL K
Sbjct: 599 MLEKGIVPDAITYNTLMKQ-HCIRNSMNTTTKIYK-RMRNQGVAPDS-NTYNILIKGHCK 655
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ E +++M EKG + + Y +LI F ++ A ELF+E G++ D E+
Sbjct: 656 ARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEI 715
Query: 133 FLKLVLMYIEEGMVEKTLEVVE 154
+ V M EEG VE TL + +
Sbjct: 716 YNFFVDMCYEEGDVEITLNLCD 737
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M S I+ D+ Y ++ F+K+G F E S+K+ +P Y L G
Sbjct: 353 EMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI--SPDYI-TYTTLIQGFG 409
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G+ E F +M +G+ D Y +LI + E+ A L E + GM ++
Sbjct: 410 QGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIV 469
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + G ++ E+++ M+ L ++ CI +VNG K A+K+ +++
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM 529
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
G P +TY ++I+AYCR+G KA K+ EM +G VV ++ ++ + G +
Sbjct: 530 EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGML 589
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
D RL+ M KG P+ YN+LM H
Sbjct: 590 EDGDRLLGWMLEKGIVPDAITYNTLMKQH 618
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 128/271 (47%), Gaps = 3/271 (1%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D Y +++ + +G+ +K L + + + L + + Y + L K G++FE
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLK---PNRYTYNSIILLLCKIGKSFEAE 348
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
K R+M + I+ D VY +LI F + V+ A + F E K + D + L+ +
Sbjct: 349 KVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G V + + M + L + +++ + K A ++ +++ G P
Sbjct: 409 GQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNI 468
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY ++I+ C+ G A ++ EM++KG V Y+SMV K G I A++L+ +
Sbjct: 469 VTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE 528
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
M+ G +P+ Y +++D + R ++ + K
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 134/300 (44%), Gaps = 16/300 (5%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+T Y I+ SL + G+ E + M + D Y+++I + + E+K A +L
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ + KG+ + + ++L+ + G + +V+ M + ++ + + +++GF K
Sbjct: 317 DDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKL 376
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A K +++++S+ P +TY ++I + + G + + +F EM +G V Y
Sbjct: 377 GHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEK---- 291
++++ +Y K G + +A L +M G PN+ Y +L+D HG +L
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496
Query: 292 ---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y ++++ A + +K E + G D ++ + +L I++
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 101/256 (39%), Gaps = 38/256 (14%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + ++M+ AGI D+ Y +++A+ ++GD +K L E R L T +
Sbjct: 518 NIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT-- 575
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ +L + G + + M EKGI+ D Y +L+ + +++K
Sbjct: 576 -FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRM 634
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ D + +++ G K R
Sbjct: 635 RNQGVAPDSNTY-----------------------------------NILIKGHCKARNL 659
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +Y+++I +G +P +Y ++I + + + +A ++F EM+ G Y+
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFF 719
Query: 242 VAMYGKTGRIRDAMRL 257
V M + G + + L
Sbjct: 720 VDMCYEEGDVEITLNL 735
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M GIV D+ Y +M+ + I +S + R + P S + Y IL K
Sbjct: 599 MLEKGIVPDAITYNTLMKQ-HCIRNSMNTTTKIYK-RMRNQGVAPDS-NTYNILIKGHCK 655
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ E +++M EKG + + Y +LI F + A ELF+E G++ D E+
Sbjct: 656 ARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEI 715
Query: 133 FLKLVLMYIEEGMVEKTLEVVE 154
+ V M EEG VE TL + +
Sbjct: 716 YNFFVDMCYEEGDVEITLNLCD 737
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 3/295 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++KM G D Y ++ K+G++ E R + P+ +Y +
Sbjct: 144 LQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQR--NCRPTVV-VYSTI 200
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + E L F DM KGI + Y+SLI + K A LF + +
Sbjct: 201 IDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKI 260
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D F LV +EGMV K VV+ M ++L +++G R V
Sbjct: 261 MPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVN 320
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++ ++ +GC+P ++Y ++IN YC+I + KA +F EM Q+G V Y++++
Sbjct: 321 VFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLC 380
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
GR+RDA+ L +M G P++ Y L D + L + VI N+
Sbjct: 381 HVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNL 435
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 147/339 (43%), Gaps = 28/339 (8%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS-- 69
+M+ ++D + +++ + ++ V +L+ + +S + P +T+ IL +S
Sbjct: 47 RMRPPPSIVD---FSKLLTSITRMKHYSTVLSLYKQMDSFGI---PHNTYTLNILINSFC 100
Query: 70 -LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L + G AF +L D+ + G + + +LI ++ A +LF + +G
Sbjct: 101 HLNRLGFAFSVLG---DILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQP 157
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ + G + + SM+ + + I++ K R A+ ++
Sbjct: 158 DVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLF 217
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++G P TY+S+I+ C +G + +A ++F M + + ++++V K
Sbjct: 218 SDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKE 277
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH------GRAKN----------LRQLEKY 292
G + A +V M +P+V YNSLMD H G+ N + + Y
Sbjct: 278 GMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISY 337
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
TT+I+ Y + D + + E G + D ++
Sbjct: 338 TTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLI 376
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 93/200 (46%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+ F +M ++G++ D Y +LI + ++ A LF E G + DL + L
Sbjct: 354 MGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDY 413
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ + + + +++ ++ L+ I ++++G + AA ++ +L S+G P
Sbjct: 414 LCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPD 473
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
TY +IN C+ GL ++A K+F EM + G Y+ + + + A++L
Sbjct: 474 VRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQ 533
Query: 260 KMKPKGCEPNVWIYNSLMDM 279
+M +G +V L++M
Sbjct: 534 EMLSRGFSIDVSTTTLLVEM 553
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 93/242 (38%), Gaps = 42/242 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--CESRKLDLTPSSTHMYKILC 67
+E+M G++ D+ Y ++ +G ALF E + DL Y+IL
Sbjct: 357 FEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVT-----YRILF 411
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D L K+ R E + + ++ + D +Y+ ++ E++ A +LF + KG+
Sbjct: 412 DYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLH 471
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ + +++NG ++ A K+
Sbjct: 472 PDVRTY-----------------------------------TIMINGLCQQGLLAEASKL 496
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ ++ GC P TY I + R +A ++F EM +GF V + +V M
Sbjct: 497 FGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSD 556
Query: 248 TG 249
G
Sbjct: 557 DG 558
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 150/309 (48%), Gaps = 38/309 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y ++++ I +D I+ F K GD + +S L+ PS T + IL +
Sbjct: 229 YAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPS-TLVAVIL--A 285
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM--- 126
LG SGR E F +++E G+ Y +L+ + +K AE + E E+ G+
Sbjct: 286 LGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPD 345
Query: 127 -----------------------LRDLE---------VFLKLVLMYIEEGMVEKTLEVVE 154
L+++E VF +++ Y ++G +K+ +V++
Sbjct: 346 EQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLK 405
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MK++ + V+++ F K A+ +E+++S+G P VT+ ++I+ +C+ G
Sbjct: 406 DMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSG 465
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ AE++F EMQQ+G+ C+ Y+ M+ G+ R ++KM+ +G +PN Y
Sbjct: 466 RHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYT 525
Query: 275 SLMDMHGRA 283
+L+D++G++
Sbjct: 526 TLVDVYGKS 534
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 131/289 (45%), Gaps = 9/289 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+++ + +S + +I+ + G+ +K + + +S + H Y ++ D+
Sbjct: 370 KEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQ---PDRHFYNVMIDTF 426
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK + F M +GI D + +LI +AEELF E +++G +
Sbjct: 427 GKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCI 486
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ E+ E+ + M++ L + +V+ + K + A++ E
Sbjct: 487 TTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEV 546
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L S G P Y ++INAY + GL A F M +G ++A +S++ +G+ R
Sbjct: 547 LKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRR 606
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+A ++ MK EP+V Y +LM K L ++EK+ V + Y
Sbjct: 607 DAEAFAVLQYMKENNIEPDVVTYTTLM------KALIRVEKFQKVPAVY 649
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 136/297 (45%), Gaps = 31/297 (10%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL ++LG+S + +E + ++ +L P Y +LI + A +V+ A L +
Sbjct: 141 LYSILINALGRSEKLYEAFL----LSQRQVLT-PLTYNALIGACARNGDVEKALNLMSKM 195
Query: 122 EEKGMLRDLEVFLKLVLMY------IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
G D V ++ Y I+ +++K +E+ K + I + I+ GF
Sbjct: 196 RRDGYQPDF-VNYSSIIQYLTRSNKIDSPILQKLYAEIETDK---IEIDGHLMNDIIVGF 251
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
SK A++ S G P T ++I A G +AE +F E+++ G +
Sbjct: 252 SKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRT 311
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQ 288
AY++++ Y +TG ++DA +V++M+ G +P+ Y+ L+D++ A L++
Sbjct: 312 RAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKE 371
Query: 289 LEK---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+E ++ +++ Y E+ + + + +G DR +M+ F K
Sbjct: 372 MEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGK 428
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 110/278 (39%), Gaps = 40/278 (14%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIG--DSEKVAALFLECESRKLDLTPSSTHMYK 64
L+ KM+ G D Y I++ + DS + L+ E E+ K+++ H+
Sbjct: 189 LNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETDKIEI---DGHLMN 245
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ K+G ++F + G+ PS ++I + + AE LF+E E
Sbjct: 246 DIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIREN 305
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ + L+ Y+ G S+K+AE +S
Sbjct: 306 GLEPRTRAYNALLKGYVRTG----------SLKDAEFVVS-------------------- 335
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ G P + TY+ +I+ Y G + A V EM+ +S ++A
Sbjct: 336 -----EMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILAN 390
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
Y G + + +++ MK G +P+ YN ++D G+
Sbjct: 391 YRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGK 428
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 111/266 (41%), Gaps = 3/266 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + MKS+G+ D Y +++ F K + A F S + P +
Sbjct: 398 QKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGI---PPDIVTW 454
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D KSGR + F +M+++G + Y +I S + + +
Sbjct: 455 NTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQS 514
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ + + LV +Y + G +E +E +K+ + + ++N +++R
Sbjct: 515 QGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSEL 574
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV + + ++G P + S+INA+ ++A V M++ + VV Y++++
Sbjct: 575 AVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMK 634
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPN 269
+ + + + +M GC P+
Sbjct: 635 ALIRVEKFQKVPAVYEEMVASGCTPD 660
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 39 EKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVY 98
E+V A + +S+ L P+S Y L D GKSGR + ++ +K G ++Y
Sbjct: 503 EQVTAFLSKMQSQGLQ--PNSI-TYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMY 559
Query: 99 ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+LI ++A ++A F+ +G+ L L+ + E+ + V++ MK
Sbjct: 560 NALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 619
Query: 159 AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ ++ + + VYE++++ GC P +
Sbjct: 620 NNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCTPDR 661
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 135/274 (49%), Gaps = 6/274 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G+ D+ Y +++AF K G E+ + S ++T Y L S
Sbjct: 193 FQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVT------YNSLLSS 246
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ G +++ F MK KG++ + YA LI V+ +L+ E + + D
Sbjct: 247 LGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYD 306
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + G VE E+ + MK LN +++NG + AA +
Sbjct: 307 IVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLL 366
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ GC P +TY ++I++Y + S A ++F+EM+++G VV+YSS++ +GK G
Sbjct: 367 EMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAG 426
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
R A+ L +MK +GC PN YN L+D RA
Sbjct: 427 RTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRA 460
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 159/367 (43%), Gaps = 57/367 (15%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q+ L Y++M A V D + ++++ K E+ +F + KL+++P + Y
Sbjct: 82 QNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVF--GDMFKLNVSPD-VYTY 138
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL SLG GR ++K F M +G + Y S++ +F S V A ++F++ +
Sbjct: 139 TILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQ 198
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ D + L+ + + G +E+ + V ++ ++ +++ ++
Sbjct: 199 KGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSF---TNEVTYNSLLSSLGRKGDIQG 255
Query: 184 AVKVYEQLISQGCIPGQVTYA-----------------------------------SIIN 208
++++ Q+ ++G + ++TYA ++++
Sbjct: 256 LMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLD 315
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+ G A ++F +M+ KG + V Y+ ++ G+ G++ A L+ +M+ GC P
Sbjct: 316 CLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAP 375
Query: 269 NVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFY 312
N+ YN+L+ +G+ NL + Y+++I + A D + +
Sbjct: 376 NIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLF 435
Query: 313 NEFRMNG 319
E + G
Sbjct: 436 REMKAEG 442
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 3/227 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + + +MK+ G+V + Y ++E G E V L+LE D+ +
Sbjct: 254 QGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDN--DIKYDIVTIN 311
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+L D L K+GR + F+DMK KG+ D Y LI ++ A L E EE
Sbjct: 312 NVL-DCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEE 370
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G ++ + L+ Y + + + MK + + ++ GF K A
Sbjct: 371 NGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDA 430
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
A+ ++ ++ ++GC P VTY +I+ R G + A + EM+ G
Sbjct: 431 AISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAG 477
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 93/219 (42%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG + R ++ + M++ D ++ +LI + ++ A + ++G
Sbjct: 5 LGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPT 64
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ ++++ G V+ L + + M A+ ++++ +K A V+
Sbjct: 65 AYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFG 124
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ P TY +I + IG K+F M +G + Y S++ +G G
Sbjct: 125 DMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAG 184
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
R+ +A + +M KG +P+ YN L+D G+ L +
Sbjct: 185 RVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLER 223
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 3/169 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
++ ++ MK G+ D+ Y ++ + G + AL LE E + Y
Sbjct: 324 EAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENG---CAPNIITY 380
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L S GK + F +MKE+G+ + Y+SLI F A LF+E +
Sbjct: 381 NTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKA 440
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
+G + + L+ I G +E + M++A + ++V
Sbjct: 441 EGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
+N + + +MK G+ + Y ++E F K G ++ +LF E K + P +
Sbjct: 391 SNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREM---KAEGCPPNH 447
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKG 90
Y +L D L ++GR +++ R+M++ G
Sbjct: 448 VTYNLLIDCLIRAGRFGAAMEYLREMRDAG 477
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 156/337 (46%), Gaps = 21/337 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G+V + Y ++E K G V LF E R ++ S H+Y L +
Sbjct: 266 MKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIE---SDIHVYTSLISWNCR 322
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G F ++ EKG+L Y +LI + E+ AE L E + KG+ V
Sbjct: 323 KGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV 382
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQL 191
F L+ Y +GM+++ + + M+ +D +C I + F++ + Y A + ++
Sbjct: 383 FNTLINGYCRKGMIDEASMIYDVMEKKGFQ-ADVFTCNTIASCFNRLKRYDEAKQWLFRM 441
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ G V+Y ++I+ YC+ G +A+++F+EM K + Y+ M+ Y K G++
Sbjct: 442 MEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKV 501
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------------LRQLEK----YTTV 295
++A +L A MK G +P+ + Y SL+ A N L+ L++ YT +
Sbjct: 502 KEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 561
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
IS + A + D Y+E + G ID + ++G
Sbjct: 562 ISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALIG 598
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 160/387 (41%), Gaps = 54/387 (13%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ +M +G+ + ++E + G+ EK L E + + + Y +
Sbjct: 190 LEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGI---KPEAYTYNTI 246
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
++ K + K + MK+ G++ + Y LI ++ E+LF E E+G+
Sbjct: 247 INAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGI 306
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ V+ L+ +G +++ + + + L S +++G K AA
Sbjct: 307 ESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEI 366
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV----------- 235
+ ++ S+G QV + ++IN YCR G+ +A ++ M++KGF V
Sbjct: 367 LMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFN 426
Query: 236 ------------------------VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
V+Y++++ +Y K G + +A RL +M K +PN
Sbjct: 427 RLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAI 486
Query: 272 IYNSLMDMH---GRAKNLRQLE-------------KYTTVISAYNMAREFDMCVKFYNEF 315
YN ++ + G+ K R+L YT++I +A D ++ ++E
Sbjct: 487 TYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM 546
Query: 316 RMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ G + +M+ SK + +E
Sbjct: 547 GLKGLDQNSVTYTVMISGLSKAGKSDE 573
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ MK+ G+ DS Y ++ + ++ LF E + LD ++ Y ++
Sbjct: 508 WANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLD---QNSVTYTVMISG 564
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFAS 107
L K+G++ E + ++K KG D VY +LI S S
Sbjct: 565 LSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALIGSMHS 602
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 134/276 (48%), Gaps = 3/276 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M + GIV D+ Y +++ F K+G+ + LF E E +++ P ++C L
Sbjct: 70 EMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRI--VPDFIAYTAVIC-GLC 126
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G+ E K F M +G+ D Y +LI + E++ A L + + G+ ++
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L + G V+ E++ M L ++ C +VNG K AVK+ E++
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
G P +T+ ++++AYC+ G KA ++ EM +G V+ ++ ++ + +G +
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGML 306
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
D RL+A M KG PN YNSLM + N+R
Sbjct: 307 EDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMR 342
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 128/268 (47%), Gaps = 3/268 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G D Y ++ + G+ +KV L E + + L + + Y + L K
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGL---KPNLYTYNSIILLLCK 57
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
SG+ + + R+M +GI+ D VY +LI F + ++ A +LF E E++ ++ D
Sbjct: 58 SGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIA 117
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ G + + +V M + + + +++G+ K A ++ Q++
Sbjct: 118 YTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMV 177
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P VTY ++ + C++G A ++ EM KG + Y+S+V K+G IR
Sbjct: 178 QSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIR 237
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
A++L+ +M+ G P+ + +LMD +
Sbjct: 238 QAVKLMEEMEVAGMYPDTITFTTLMDAY 265
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 113/217 (52%), Gaps = 2/217 (0%)
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G ++LK ++M+ KG+ + Y S+I +V AE + +E +G++ D V
Sbjct: 23 GGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVV 82
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + + G ++ ++ + M+ + + D I+ ++ G + A KV+ ++
Sbjct: 83 YTTLIDGFCKLGNIQAAYKLFDEMEKQRI-VPDFIAYTAVICGLCRCGKMMEADKVFNKM 141
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S+G P +VTY ++I+ YC+ G KA + +M Q G VV Y+++ K G++
Sbjct: 142 FSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQV 201
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
A L+ +M KG + N+ YNSL++ ++ N+RQ
Sbjct: 202 DTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQ 238
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%)
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G P V+Y+++IN YC G K K+ EMQ KG + Y+S++ + K+G++ D
Sbjct: 4 RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
A R++ +M +G P+ +Y +L+D + N++
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQ 97
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 116/318 (36%), Gaps = 73/318 (22%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KM S G+ D Y +++ + K G+ EK A L + + LTP+ Y L D
Sbjct: 138 FNKMFSRGVEPDEVTYTTLIDGYCKSGEMEK--AFSLHNQMVQSGLTPNVV-TYTALADG 194
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ + +M KG+ + Y SL+ ++ A +L +E E GM D
Sbjct: 195 LCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPD 254
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF--------SKRRAY 181
F L+ Y + G + K E++ M + L + V++NGF +R
Sbjct: 255 TITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLA 314
Query: 182 W---------------------------AAVKVYEQLISQGCIPGQVTYASIINAYCR-- 212
W ++Y+ + ++G +P TY +I +C+
Sbjct: 315 WMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKAR 374
Query: 213 ---------------------------------IGLYSKAEKVFIEMQQKGFDKCVVAYS 239
S+A ++F EM+++G Y+
Sbjct: 375 NMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYN 434
Query: 240 SMVAMYGKTGRIRDAMRL 257
V + G + A+ L
Sbjct: 435 LFVDISYGEGNMETALEL 452
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P S + Y IL K+ E ++M EKG S Y S+I F ++ A E
Sbjct: 358 PDS-NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARE 416
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV-ESMKNAELN 162
LF+E +GM D E++ V + EG +E LE+ E+++N LN
Sbjct: 417 LFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIENCFLN 463
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 155/337 (45%), Gaps = 21/337 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G+V + Y +ME K G LF E R ++ S H+Y L +
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIE---SDVHVYTSLISWNCR 341
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G F ++ EKG+ Y +LI + E+ AE L E + KG+ V
Sbjct: 342 KGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV 401
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQL 191
F L+ Y +GMV++ + + M+ +D +C I + F++ + Y A + ++
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQ-ADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ G V+Y ++I+ YC+ G +A+++F+EM KG + Y+ M+ Y K G+I
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------------LRQLEK----YTTV 295
++A +L A M+ G +P+ + Y SL+ A N L+ L++ YT +
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
IS + A + D Y+E + G ID + ++G
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIG 617
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 73/139 (52%)
Query: 150 LEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
LE+ M ++ + I+ ++V G +R + K+ ++ +G P TY +IINA
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
Y + +S E V M++ G V Y+ ++ + K G++ DA +L +M+ +G E +
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 270 VWIYNSLMDMHGRAKNLRQ 288
V +Y SL+ + R N+++
Sbjct: 329 VHVYTSLISWNCRKGNMKR 347
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 117/282 (41%), Gaps = 18/282 (6%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E L+ F M +KG+ D + + + + E+F+ + G+ + +V
Sbjct: 172 EGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVV 231
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
G VEK+ ++++ + I+N + K+R + V + + G +
Sbjct: 232 EGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVV 291
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
+VTY ++ + G S AEK+F EM+++G + V Y+S+++ + G ++ A L
Sbjct: 292 YNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLL 351
Query: 258 VAKMKPKGCEPNVWIYNSLMD-----------------MHGRAKNLRQLEKYTTVISAYN 300
++ KG P+ + Y +L+D M + N+ Q+ + T+I Y
Sbjct: 352 FDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV-VFNTLIDGYC 410
Query: 301 MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
D Y+ G D + F++L + +E
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDE 452
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M++ G+ DS Y ++ + ++ LF E + LD ++ Y ++ L K
Sbjct: 530 MEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLD---QNSVTYTVMISGLSK 586
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFAS 107
+G++ E + +MK KG D VY +LI S S
Sbjct: 587 AGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 7/278 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G+ D Y +++ F K+G+++ LF E E+R ++ P S ++C L
Sbjct: 205 EMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAR--EIVPDSIAFSALIC-GLS 261
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
SG+ E K F +M +KG D Y +LI + + E+K A L + + G+ ++
Sbjct: 262 GSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVV 321
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L + G ++ E++ M K +LNIS IVNG K AVK+ E
Sbjct: 322 TYTALADGLCKSGELDTANELLHEMCRKGLQLNIS--TYNTIVNGLCKAGNILQAVKLME 379
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ G P +TY ++++AY + G KA ++ EM +G VV ++ ++ +G
Sbjct: 380 EMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSG 439
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
++ D RL+ M KG PN YNS+M + N+R
Sbjct: 440 KLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMR 477
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 127/273 (46%), Gaps = 3/273 (1%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H +M+ G + D Y I++ + +G+ +KV L E + + L + + Y +
Sbjct: 131 HLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLK---PNLYTYSSII 187
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
L KSG+ E K R+M ++G+ D +Y +LI F + + A +LF E E + ++
Sbjct: 188 LLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIV 247
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D F L+ G V + ++ M + +++G+ K A +
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFL 307
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ Q++ G P VTY ++ + C+ G A ++ EM +KG + Y+++V K
Sbjct: 308 HNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCK 367
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
G I A++L+ +MK G P+ Y +LMD +
Sbjct: 368 AGNILQAVKLMEEMKEAGLHPDTITYTTLMDAY 400
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 15/261 (5%)
Query: 33 YKIGDSEKVAALFLECESRKLDLT----------PS-----STHMYKILCDSLGKSGRAF 77
Y + S L+L C S K D+ P +T Y IL +SL + G+
Sbjct: 68 YGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIR 127
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E M+ KG + D Y ++I + + E++ +L KE + KG+ +L + ++
Sbjct: 128 EAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSII 187
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
L+ + G V + +V+ M + I +++GF K AA K++ ++ ++ +
Sbjct: 188 LLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIV 247
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P + ++++I G +A+K+F EM +KGF+ V Y++++ Y K G ++ A L
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFL 307
Query: 258 VAKMKPKGCEPNVWIYNSLMD 278
+M G PNV Y +L D
Sbjct: 308 HNQMVQIGLTPNVVTYTALAD 328
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 126/277 (45%), Gaps = 3/277 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G+ + Y + + K G+ + L E + L L S+ Y + +
Sbjct: 308 HNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIST---YNTIVNG 364
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G + +K +MKE G+ D Y +L+ ++ E+ A EL +E ++G+
Sbjct: 365 LCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPT 424
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ G +E +++ M + + I+ + R + ++Y
Sbjct: 425 VVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYR 484
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ +QG +P TY +I +C+ +A + EM +K F+ +Y++++ + K
Sbjct: 485 GMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRK 544
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
++ +A +L +M+ +G + IYN +DM+ N+
Sbjct: 545 KLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNM 581
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+ P S + Y IL K+ E ++M EK S Y +LI F ++ A
Sbjct: 491 VVPDS-NTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEA 549
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
+LF+E +G++ E++ V M EEG +E TLE+ +
Sbjct: 550 RQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCD 589
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 141/280 (50%), Gaps = 7/280 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTHMYKILCD 68
+ MK+ I+ D Y +++ K G E+ +F + E + D+ Y L D
Sbjct: 727 DSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVA-----YTSLMD 781
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
LGK G+ L FR M +K + D Y+SLI S V+ A F+ + KG
Sbjct: 782 VLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTP 841
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ V+ L+ + ++GMV++ LE+ E M+ + + +++G +K A K+
Sbjct: 842 NVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLL 901
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ GC+P VTY +I+ ++G+ +AE F M++KG V+ ++S++ GK
Sbjct: 902 EEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKV 961
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
++ +A L M+ +G P+V YN L+D+ GRA + +
Sbjct: 962 DKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHE 1001
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 3/258 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ K G ++ +L E E + + S Y L S K + E L F
Sbjct: 566 YTTLVDGLGKAGRLDEAVSLLREMEKQGCE---PSVVTYSSLMASFYKRDQEEESLSLFD 622
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M KG + D S Y+ +I +V A ++F +E+GM L + L+ +++
Sbjct: 623 EMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDE 682
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ L++ ++ + L + ++VNG K A K+ + + +Q +P TY
Sbjct: 683 KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYT 742
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+++ + G +A +F +M ++G + VVAY+S++ + GK G++ A+ + M K
Sbjct: 743 SLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK 802
Query: 265 GCEPNVWIYNSLMDMHGR 282
C P+V Y+SL+D G+
Sbjct: 803 RCVPDVVTYSSLIDSLGK 820
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 155/364 (42%), Gaps = 53/364 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MK D+ Y +++ K G+++ LF E + R L P+ Y I+
Sbjct: 380 FVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDR--GLVPN-LRTYNIMISV 436
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG---- 125
LGK+GR E + F D+KE+G + D Y +LI ++ + KE EKG
Sbjct: 437 LGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECI 496
Query: 126 MLRDLE---------------------------VFLKLVLMYIEEGMVEKTLEVVESMKN 158
+ RD + L+ +I G V++ ++++E MK
Sbjct: 497 ISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKK 556
Query: 159 AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK 218
E + +V+G K AV + ++ QGC P VTY+S++ ++ + +
Sbjct: 557 HECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEE 616
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +F EM +KG V YS ++ K+ + A+ + +MK +G EP
Sbjct: 617 SLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEP---------- 666
Query: 279 MHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
L Y T++S+ + D ++ +NE + + V D + IMV K +
Sbjct: 667 ---------LLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSN 717
Query: 339 QIEE 342
+++E
Sbjct: 718 RVDE 721
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 133/273 (48%), Gaps = 15/273 (5%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ MK+ + Y ++ K G E+ +F+E + + +P + Y L D
Sbjct: 344 FFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKEN--NCSPDAI-AYNTLID 400
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
LGK+G A F++MK++G++ + Y +I A +LF + +E+G +
Sbjct: 401 GLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVP 460
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ + + G ++K L +++ M + C+I + ++
Sbjct: 461 DVFTYNTLIDVLGKGGQMDKVLAIIKEM------VEKGGECIISR--DSNAGHEGTIEGA 512
Query: 189 EQLISQGCIP----GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ + + G++TY ++++A+ G +A K+ M++ VV Y+++V
Sbjct: 513 DRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDG 572
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GK GR+ +A+ L+ +M+ +GCEP+V Y+SLM
Sbjct: 573 LGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLM 605
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 112/239 (46%), Gaps = 3/239 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
ST+MY + + L K G + F + + I D + + SF + A E
Sbjct: 250 PSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEP 309
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+E + G+ + F L+ ++ G +++ + MKN + + +VNG +K
Sbjct: 310 IQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAK 369
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A +V+ ++ C P + Y ++I+ + G A +F EM+ +G +
Sbjct: 370 AGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRT 429
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
Y+ M+++ GK GR +A +L +K +G P+V+ YN+L+D+ G+ Q++K +I
Sbjct: 430 YNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGG---QMDKVLAII 485
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 126/266 (47%), Gaps = 7/266 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +M AF G ++ L LE +K + P+ Y L D LGK+GR E + R
Sbjct: 531 YNTLMSAFIHNGHVDEAVKL-LEV-MKKHECIPTVV-TYTTLVDGLGKAGRLDEAVSLLR 587
Query: 85 DMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
+M+++G +PSV Y+SL+ SF + + + LF E KG + D+ + ++ +
Sbjct: 588 EMEKQGC--EPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCK 645
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
V++ L+V MK + +++ K A++++ +L +P
Sbjct: 646 SDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFV 705
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y ++N + +A K+ M+ + + Y+S++ GK+GR+ +A + KM
Sbjct: 706 YNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMT 765
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+G EP+V Y SLMD+ G+ L
Sbjct: 766 EEGHEPDVVAYTSLMDVLGKGGKLSH 791
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 156/386 (40%), Gaps = 50/386 (12%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
S + + K+ I D+ + + +F + G + A E +D H +
Sbjct: 269 HSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGID---PGVHTF 325
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+L D+L KSG E KFF MK + Y +L+ A ++ A E+F E +E
Sbjct: 326 TVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKE 385
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
D + L+ + G + + + MK+ L + ++++ K
Sbjct: 386 NNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPE 445
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG------------- 230
A +++ L QG +P TY ++I+ + G K + EM +KG
Sbjct: 446 AWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGH 505
Query: 231 ------FDKCV------------VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
D+ V + Y+++++ + G + +A++L+ MK C P V
Sbjct: 506 EGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVT 565
Query: 273 YNSLMDMHGRAKN-------LRQLEK---------YTTVISAYNMAREFDMCVKFYNEFR 316
Y +L+D G+A LR++EK Y+++++++ + + + ++E
Sbjct: 566 YTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV 625
Query: 317 MNGGVIDRAMAGIMVGVFSKLSQIEE 342
G V D + +++ K +++
Sbjct: 626 RKGCVADVSTYSLVINCLCKSDDVDQ 651
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+++E S G + G Y ++++F K G ++ LF E + R+ P + Y L
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQ---CPPNIVTYNNLL 885
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
L K+GR K +M++ G + D Y LI + V AE FK +EKG++
Sbjct: 886 SGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIV 945
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVE---SMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D+ F L+ G V+K LE E SM+ N S V+++ + A
Sbjct: 946 PDVITFTSLIESL---GKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEA 1002
Query: 185 VKVYEQLISQGCIPGQVT 202
++ ++ +GC+P +T
Sbjct: 1003 AMIFHEMKVKGCMPDGIT 1020
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 104/272 (38%), Gaps = 16/272 (5%)
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
++ G Y +I A E ++ ++G + + L+ + V
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
LE+ MK+ N S + ++ K Y +AV V+ +L P T+
Sbjct: 234 SGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIF 293
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
++++ R G A + EM + G D V ++ ++ K+G I +A + MK C
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC 353
Query: 267 EPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVK 310
PNV Y +L++ +A L + + Y T+I A E DM
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACG 413
Query: 311 FYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ E + G V + IM+ V K + E
Sbjct: 414 LFKEMKDRGLVPNLRTYNIMISVLGKAGRQPE 445
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 3/299 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++KM G + Y ++ K+G+S L + + + Y +
Sbjct: 164 LHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCE---PNVITYNTI 220
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K + E L F +M KGI + S Y S+I +E K L E + +
Sbjct: 221 IDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKI 280
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ ++ +F LV +EGMV +VV+ M + +++G R A K
Sbjct: 281 MPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADK 340
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++ ++ +GC P ++Y+++IN YC+I KA +F EM Q+ +V Y++++
Sbjct: 341 VFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLC 400
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREF 305
GR+RDA+ L +M G P++ Y L+D + ++L Q I N+A +
Sbjct: 401 HVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDI 459
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 1/222 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
PS KIL S+ +L + M GI D A +I SF + V
Sbjct: 72 PSVVDFAKILT-SIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFS 130
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ + + G D F L+ EG + + L + + M + +++G
Sbjct: 131 VLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLC 190
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K AA+++ ++ + C P +TY +II+ + ++A +F EM KG V
Sbjct: 191 KVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVS 250
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y+S++ K + L+ +M PNV I+ +L+D
Sbjct: 251 TYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 118/303 (38%), Gaps = 38/303 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ + +M + GI + Y I+ K + + VA L E K+ P+ ++ L
Sbjct: 234 LNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKI--MPNVV-IFTTL 290
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+L K G M ++G+ D Y +L+ +E+ A+++F KG
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L+ Y + ++K + + E M EL + +++G A+
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410
Query: 187 VYEQLISQGCIPGQVTY-----------------------------------ASIINAYC 211
++ ++++ G IP VTY +I+ C
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
R+G A +F + KG V Y+ M+ G + +A +L +M GC P+
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDC 530
Query: 272 IYN 274
YN
Sbjct: 531 TYN 533
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 92/203 (45%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K R + + F +M ++ ++ + Y +LI + ++ A LF E
Sbjct: 357 YSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMV 416
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G + DL + L+ + +++ + ++++++ + L ++++G +
Sbjct: 417 ASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELE 476
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AA ++ L S+G P TY +IN C GL ++A K+F EM G Y+ +
Sbjct: 477 AAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLIT 536
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ + A++L+ +M +G
Sbjct: 537 RGFLRNNETLSAIQLLQEMLGRG 559
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 93/240 (38%), Gaps = 3/240 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M G + Y ++ + KI +K LF E R +L P+ Y L
Sbjct: 342 FDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQR--ELVPNIV-TYNTLIHG 398
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L GR + + F +M G + D Y L+ + A + K E + D
Sbjct: 399 LCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPD 458
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ + ++ G +E ++ S+ + L+ +++NG + A K++
Sbjct: 459 IQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFR 518
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + GC P TY I + R A ++ EM +GF + +V M G
Sbjct: 519 EMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG 578
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 92/224 (41%), Gaps = 7/224 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--CESRKLDLTPSSTHMYK 64
++ +E+M +V + Y ++ +G ALF E + DL Y+
Sbjct: 374 MYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLV-----TYR 428
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
IL D L K+ + + + ++ + D Y +I + E++ A +LF K
Sbjct: 429 ILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSK 488
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ D+ + ++ +G++ + ++ M + DC +I GF + +A
Sbjct: 489 GLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSA 548
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ ++++ +G T I+ GL +++ E Q
Sbjct: 549 IQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 141/277 (50%), Gaps = 3/277 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L++ ++++G+ + + ++ A G +E+ A+F E + L + L
Sbjct: 301 LYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLK---PRIKAFNAL 357
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ G E +M++ G+ D Y L+ ++A++ + A L K+ E + +
Sbjct: 358 LKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNV 417
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ +F +++ Y + G +KT EV+ MKN+ + V+++ F K A++
Sbjct: 418 QPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAME 477
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
Y++++S+G P VT+ ++I+ + + G + +A ++F EMQ++G+ C Y+ M+ G
Sbjct: 478 TYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLG 537
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ + + L+ KM+ +G PNV Y +L+D++G +
Sbjct: 538 EQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHS 574
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 144/339 (42%), Gaps = 32/339 (9%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD--S 69
+M+ +G+ D Y +++A+ +G E L + E+R ++ P++ +IL
Sbjct: 376 EMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEAR--NVQPNTFIFSRILASYRD 433
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ + FE+L R+MK + D Y +I +F + A E + +G+ D
Sbjct: 434 RGEWQKTFEVL---REMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPD 490
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY- 188
+ + L+ + + G ++ E+ E M+ +++N ++ W VK+
Sbjct: 491 VVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEK-WDEVKILL 549
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ SQG +P VTY ++++ Y G ++ A M+ G Y++++ + +
Sbjct: 550 GKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQR 609
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------------ 290
G A+ M G P++ NSL++ G + R +E
Sbjct: 610 GLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDR--RDIEAFSILQYMKENDVKPDVV 667
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVID---RAM 326
YTT++ A +FD Y E ++G D RAM
Sbjct: 668 TYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAM 706
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 127/276 (46%), Gaps = 5/276 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIG--DSEKVAALFLECESRKLDLTPSSTHMYK 64
L+ +M+ G D Y I+++ + D + L+ E ES K++L +
Sbjct: 229 LNLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIEL---DGLLLN 285
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ K+G L F ++ G+ S + ++I + + + AE +F+E +E
Sbjct: 286 DIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEG 345
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ ++ F L+ Y +G +++ ++ M+ + L+ + ++V+ ++ + +A
Sbjct: 346 GLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESA 405
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ +Q+ ++ P ++ I+ +Y G + K +V EM+ Y+ M+
Sbjct: 406 RHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDT 465
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+GK + AM +M +G EP+V +N+L+D H
Sbjct: 466 FGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCH 501
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 135/299 (45%), Gaps = 31/299 (10%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL +LG+S + +E + +K L P Y +LI + A +++ A L
Sbjct: 181 LYSILIHALGRSEKLYEAFI----LSQKQTLT-PLTYNALIGACARNNDLEKALNLMSRM 235
Query: 122 EEKGMLRDLEVFLKLVLMY------IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ G D + L++ I+ +++K E +ES K + + + I+ GF
Sbjct: 236 RQDGFQSDF-INYSLIIQSLTRTNKIDIPLLQKLYEEIESDK---IELDGLLLNDIILGF 291
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+K A+ + + G P T+ ++I+A G +AE +F EM++ G +
Sbjct: 292 AKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRI 351
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK- 291
A+++++ Y + G +++A ++++M+ G P+ Y L+D + GR ++ R L K
Sbjct: 352 KAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQ 411
Query: 292 ------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
++ ++++Y E+ + E + + DR +M+ F K +
Sbjct: 412 MEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFN 470
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 148/309 (47%), Gaps = 38/309 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y ++++ I +D I+ F K GD + +S L+ PS T + IL +
Sbjct: 245 YTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPS-TLVAVIL--A 301
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM--- 126
LG SGR E F +++E G Y +L+ + +K AE + E E+ G+
Sbjct: 302 LGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPD 361
Query: 127 -----------------------LRDLE---------VFLKLVLMYIEEGMVEKTLEVVE 154
L+++E V+ +++ Y ++G +K+ +V++
Sbjct: 362 EQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLK 421
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MK+ + V+++ F K A+ +E+++S+G P VT+ ++IN +C+ G
Sbjct: 422 DMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSG 481
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
++ AE++F EMQQ+G+ C+ Y+ M+ G+ R ++KM+ +G PN Y
Sbjct: 482 RHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYT 541
Query: 275 SLMDMHGRA 283
+L+D++G++
Sbjct: 542 TLVDVYGKS 550
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 132/289 (45%), Gaps = 9/289 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+++ + +S Y +I+ ++ G+ +K + + +S + H Y ++ D+
Sbjct: 386 KEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQ---PDRHFYNVMIDTF 442
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK + F M +GI D + +LI +AEELF E +++G +
Sbjct: 443 GKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCI 502
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ E+ E+ + M++ L + +V+ + K + A++ E
Sbjct: 503 TTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEV 562
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L S G P Y ++INAY + GL A F M +G ++A +S++ +G+ R
Sbjct: 563 LKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRR 622
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+A ++ MK EP+V Y +LM K L ++EK+ V + Y
Sbjct: 623 DAEAFAVLQYMKENNIEPDVVTYTTLM------KALIRVEKFQKVPAVY 665
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 136/297 (45%), Gaps = 31/297 (10%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL ++LG+S + +E + ++ +L P Y +LI + A +V+ A L +
Sbjct: 157 LYSILINALGRSEKLYEAFL----LSQRQVL-TPLTYNALIGACARNGDVEKALNLMSKM 211
Query: 122 EEKGMLRDLEVFLKLVLMY------IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
G D V ++ Y I+ +++K +E+ K + I + I+ GF
Sbjct: 212 RRDGYQPDF-VNYSSIIQYLTRSNKIDSPILQKLYTEIETDK---IEIDGHLMNDIILGF 267
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
SK A++ S G P T ++I A G +AE +F E+++ G +
Sbjct: 268 SKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRT 327
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQ 288
AY++++ Y KTG ++DA +V++M+ G +P+ Y+ L+D + A L++
Sbjct: 328 RAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKE 387
Query: 289 LEK---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+E Y+ ++++Y E+ + + + NG DR +M+ F K
Sbjct: 388 MEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGK 444
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L P+S Y L D GKSGR + ++ +K G ++Y +LI ++A ++A
Sbjct: 533 LLPNSI-TYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELA 591
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
F+ +G+ L L+ + E+ + V++ MK + ++
Sbjct: 592 VNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKA 651
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
+ + VYE++++ GC P + A + +A
Sbjct: 652 LIRVEKFQKVPAVYEEMVTSGCTPDRKARAMLRSA 686
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 165/362 (45%), Gaps = 27/362 (7%)
Query: 6 KLHYYE----KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
+LH E +M+ GI + Y ++ K SEK ++ + K + ++T
Sbjct: 222 QLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVY---QRMKKERCRTNTZ 278
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y ++ + GK+ + L+ FR+MK G + Y +L+ +FA + AEE+F+E
Sbjct: 279 TYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEM 338
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++ G D+ + L+ Y G+ + E+ M++ ++V+ F + +
Sbjct: 339 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLH 398
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++L QG P ++ +++A+ R G ++ E+V ++ + G A ++M
Sbjct: 399 QEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAM 458
Query: 242 VAMYGKTGRIRDAMRLVAKMK----PKGCEPNVWIYNSLMDMHGRAKNLRQLE------- 290
+ YG+ GR+ D RL A M+ P+ YN L++ +GRA L ++E
Sbjct: 459 LNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLA 518
Query: 291 ---------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+T+ I AY +E+ C++ + E G D A +++ S Q+E
Sbjct: 519 ARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVE 578
Query: 342 EL 343
++
Sbjct: 579 QV 580
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D+ G+ + E + + E + YA L+ ++ ++ AE + E +
Sbjct: 175 YNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQ 234
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ V+ + ++ EK +EV + MK + +++N + K
Sbjct: 235 RNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPM 294
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++++V+ ++ S GC P TY +++NA+ R GL KAE+VF EMQQ G + V AY++++
Sbjct: 295 SSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 354
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y + G + A + + M+ GCEP+ YN L+D GRA
Sbjct: 355 EAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRA 395
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 1/146 (0%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECE-SRKLDLTPSSTHMYKILCDSL 70
++ +G+ D+ ++ A+ + G + + LF E T Y +L ++
Sbjct: 442 QLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAY 501
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G++G + FR + +G+ D + S I ++A E +F+E + G D
Sbjct: 502 GRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDA 561
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESM 156
L+ +E VE+ +V SM
Sbjct: 562 GTAKVLLAACSDERQVEQVTAIVRSM 587
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 145/309 (46%), Gaps = 38/309 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +++ + LD I+ F K GD K ++ L +P + + ++ +
Sbjct: 244 YSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGL--SPRTATLIAVIS-A 300
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM--- 126
LG SGR E F +MK+ G+ Y L+ + +K AE + E E G+
Sbjct: 301 LGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPD 360
Query: 127 -----------------------LRDLE---------VFLKLVLMYIEEGMVEKTLEVVE 154
L+++E VF +++ Y + G +K+ +V++
Sbjct: 361 ECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLK 420
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MKN+ + V+++ F K A+ +++++S+G P VT+ ++I+ +C+
Sbjct: 421 EMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAE 480
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
L+ +AE++F EM +KGF CV ++ M+ +G+ R D L+ M+ G PNV Y
Sbjct: 481 LHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYT 540
Query: 275 SLMDMHGRA 283
+L+D++G++
Sbjct: 541 TLIDIYGKS 549
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 134/289 (46%), Gaps = 9/289 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M++ I+ +S + +I+ ++ G+ +K + E ++ + H Y ++ D+
Sbjct: 385 KEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVR---PDRHFYNVMIDTF 441
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK + F M +GI D + +LI + AEELF+E EKG +
Sbjct: 442 GKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCV 501
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F ++ + E+ + ++ +M++ L + +++ + K + A++ E
Sbjct: 502 TTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLED 561
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ S G P Y ++INAY + GL +A F M+ ++A +S++ +G+ R
Sbjct: 562 MKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRR 621
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+A ++ MK +P+V Y +LM K L +++K+ V S Y
Sbjct: 622 DAEAFSVLKYMKENDLKPDVVTYTTLM------KALIRVDKFNKVPSVY 664
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 139/304 (45%), Gaps = 9/304 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIG--DSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+M+ G D Y I+++ + DS + L+ E + KL+L + +
Sbjct: 209 RMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLEL---DVQLSNDIIVG 265
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+G + ++F ++ G+ + ++I + + AE +F+E ++ G+
Sbjct: 266 FAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPK 325
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y++ GM++ +V M+ + ++ +C ++++ +S + +A V +
Sbjct: 326 TRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLK 385
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + +P ++ I+ +Y G + K+ +V EM+ G Y+ M+ +GK
Sbjct: 386 EMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFS 445
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
+ AM KM +G +P+ +N+L+D H +A +L + + M + F CV
Sbjct: 446 CLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKA----ELHERAEELFEEMMEKGFSPCV 501
Query: 310 KFYN 313
+N
Sbjct: 502 TTFN 505
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 132/295 (44%), Gaps = 23/295 (7%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL +LG+S + +E F +++ + P Y +LI + A +++ A L
Sbjct: 156 LYSILIHALGRSEKLYEA---FLLSQQQAL--SPLTYNALINACARNNDLEKAINLISRM 210
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTL--EVVESMKNAELNISDCISCVIVNGFSKRR 179
+ G D + ++ + ++ + ++ ++ +L + +S I+ GF+K
Sbjct: 211 RQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAG 270
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A++ + + G P T ++I+A G +AE +F EM+ G AY+
Sbjct: 271 DPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYN 330
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLEK- 291
++ Y K G ++DA +V++M+ G P+ Y+ L+D + A L+++E
Sbjct: 331 GLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEAN 390
Query: 292 --------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
++ ++++Y E+ + E + +G DR +M+ F K S
Sbjct: 391 NIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFS 445
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 1/159 (0%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R L L P+ Y L D GKSGR + ++ DMK G+ ++Y +LI ++A
Sbjct: 528 RSLGLLPNVV-TYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGL 586
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
+ A F+ + L L+ + E+ + V++ MK +L
Sbjct: 587 SEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTT 646
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
++ + + VYE++I GC P + A + +A
Sbjct: 647 LMKALIRVDKFNKVPSVYEEMILAGCTPDRKARAMLRSA 685
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 142/270 (52%), Gaps = 5/270 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++ AG + Y ++ A+ + G K +F E+ K+ P+ +Y + D+
Sbjct: 143 FDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIF---EAMKVVCKPNLV-VYNAVIDA 198
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G L+ FR+M E+G+ D + +LI + + + +F E EE+G+ RD
Sbjct: 199 CSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARD 258
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ L+ Y G + ++E+M K++ + S +++G++K A+ ++
Sbjct: 259 DVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALF 318
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ +Q P + Y ++++ + R+G + +A + M++ GF K +V Y++++ YGK
Sbjct: 319 QEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQ 378
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G+ R+AM L+ +MK +G PN+ Y++L+D
Sbjct: 379 GKFREAMSLLEEMKQRGASPNILTYSALID 408
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ GI D Y ++ + + G AAL +E ++ + PS Y + D
Sbjct: 247 FAEMEERGIARDDVTYNTLIATYCRGGQMHLGAAL-METMAKSSGIEPSVI-TYSTMIDG 304
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G A E + F++M+ + + D Y +++ A + A + + EE G +D
Sbjct: 305 YAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKD 364
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y ++G + + ++E MK
Sbjct: 365 IVTYNALLDSYGKQGKFREAMSLLEEMKQ------------------------------- 393
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+G P +TY+++I+AYC+ G + A +F ++++ G VV YS++V K G
Sbjct: 394 ----RGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNG 449
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+A+ L+ +M G PNV YNSL+D +GR
Sbjct: 450 SPDEALALLEEMADNGIRPNVITYNSLLDAYGR 482
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 118/256 (46%), Gaps = 41/256 (16%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILED--PSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
LG SG+ +++K F M + L V +++I S + A+ +F A G
Sbjct: 93 LGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFG 152
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA-ELNISDCISCVIVNGFSKRRAYWAAVK 186
++ V+ L+ Y G + K +E+ E+MK + N+ + +++ SK Y A++
Sbjct: 153 NNVFVYSSLICAYGRSGKLAKAVEIFEAMKVVCKPNL--VVYNAVIDACSKGGDYPTALR 210
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--------------- 231
++ +++ QG P ++T+ ++I+A R + + +++F EM+++G
Sbjct: 211 IFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYC 270
Query: 232 ---------------------DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ V+ YS+M+ Y K G +A+ L +M+ + EP+
Sbjct: 271 RGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDG 330
Query: 271 WIYNSLMDMHGRAKNL 286
YN+++D+H R N
Sbjct: 331 ICYNTMVDIHARLGNF 346
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 129/314 (41%), Gaps = 52/314 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILC 67
+++M++ + D CY +++ ++G+ ++ ++ E D+ Y L
Sbjct: 318 FQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIV-----TYNALL 372
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
DS GK G+ E + +MK++G + Y++LI ++ + A LF++ ++ G+
Sbjct: 373 DSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQ 432
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-----------CVIVN-GF 175
D+ ++ LV + G ++ L ++E M + + + I+ C++V F
Sbjct: 433 PDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIR-PNVITYNSLLDAYGRQCLMVRKTF 491
Query: 176 SKRRAYW------------------------------AAVKVYEQLISQGCIPGQVTYAS 205
K R + AA +V+ ++ G P VT++S
Sbjct: 492 PKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSS 551
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
I+NA A + M + FD V + + M + RDA L ++ G
Sbjct: 552 ILNACSHCASVEDASNLLEAM--RVFDGRVYGVTHGLLMGFRIRVWRDAETLFNELTTLG 609
Query: 266 CEPNVWIYNSLMDM 279
V YN+L D+
Sbjct: 610 HNTAVAFYNALTDV 623
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 185 VKVYEQLISQGCIPGQV--TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
VK ++ ++ Q + Q ++II++ R+G A+ +F GF V YSS++
Sbjct: 103 VKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLI 162
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----LR----QLEK--- 291
YG++G++ A+ + MK C+PN+ +YN+++D + + LR LE+
Sbjct: 163 CAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMS 221
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ T+ISA A ++ C + + E G D ++ + + Q+
Sbjct: 222 PDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMH 276
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 142/270 (52%), Gaps = 5/270 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++ AG + Y ++ A+ + G K +F E+ K+ P+ +Y + D+
Sbjct: 144 FDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIF---EAMKVVCKPNLV-VYNAVIDA 199
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G L+ FR+M E+G+ D + +LI + + + +F E EE+G+ RD
Sbjct: 200 CSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARD 259
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ L+ Y G + ++E+M K++ + S +++G++K A+ ++
Sbjct: 260 DVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALF 319
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ +Q P + Y ++++ + R+G + +A + M++ GF K +V Y++++ YGK
Sbjct: 320 QEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQ 379
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G+ R+AM L+ +MK +G PN+ Y++L+D
Sbjct: 380 GKFREAMSLLEEMKQRGASPNILTYSALID 409
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ GI D Y ++ + + G AAL +E ++ + PS Y + D
Sbjct: 248 FAEMEERGIARDDVTYNTLIATYCRGGQMHLGAAL-METMAKSSGIEPSVI-TYSTMIDG 305
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G A E + F++M+ + + D Y +++ A + A + + EE G +D
Sbjct: 306 YAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKD 365
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y ++G + + ++E MK
Sbjct: 366 IVTYNALLDSYGKQGKFREAMSLLEEMKQ------------------------------- 394
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+G P +TY+++I+AYC+ G + A +F ++++ G VV YS++V K G
Sbjct: 395 ----RGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNG 450
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+A+ L+ +M G PNV YNSL+D +GR
Sbjct: 451 SPDEALALLEEMADNGIRPNVITYNSLLDAYGR 483
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 118/256 (46%), Gaps = 41/256 (16%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILED--PSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
LG SG+ +++K F M + L V +++I S + A+ +F A G
Sbjct: 94 LGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFG 153
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA-ELNISDCISCVIVNGFSKRRAYWAAVK 186
++ V+ L+ Y G + K +E+ E+MK + N+ + +++ SK Y A++
Sbjct: 154 NNVFVYSSLICAYGRSGKLAKAVEIFEAMKVVCKPNL--VVYNAVIDACSKGGDYPTALR 211
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--------------- 231
++ +++ QG P ++T+ ++I+A R + + +++F EM+++G
Sbjct: 212 IFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYC 271
Query: 232 ---------------------DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ V+ YS+M+ Y K G +A+ L +M+ + EP+
Sbjct: 272 RGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDG 331
Query: 271 WIYNSLMDMHGRAKNL 286
YN+++D+H R N
Sbjct: 332 ICYNTMVDIHARLGNF 347
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 129/314 (41%), Gaps = 52/314 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILC 67
+++M++ + D CY +++ ++G+ ++ ++ E D+ Y L
Sbjct: 319 FQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIV-----TYNALL 373
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
DS GK G+ E + +MK++G + Y++LI ++ + A LF++ ++ G+
Sbjct: 374 DSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQ 433
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-----------CVIVN-GF 175
D+ ++ LV + G ++ L ++E M + + + I+ C++V F
Sbjct: 434 PDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIR-PNVITYNSLLDAYGRQCLMVRKNF 492
Query: 176 SKRRAYW------------------------------AAVKVYEQLISQGCIPGQVTYAS 205
K R + AA +V+ ++ G P VT++S
Sbjct: 493 PKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSS 552
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
I+NA A + M + FD V + + M + RDA L ++ G
Sbjct: 553 ILNACSHCASVEDASSLLEAM--RVFDGRVYGVTHGLLMGFRIRVWRDAETLFNELTTLG 610
Query: 266 CEPNVWIYNSLMDM 279
V YN+L D+
Sbjct: 611 HNTAVAFYNALTDV 624
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 185 VKVYEQLISQGCIPGQV--TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
VK ++ ++ Q + Q ++II++ R+G A+ +F GF V YSS++
Sbjct: 104 VKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLI 163
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----LR----QLEK--- 291
YG++G++ A+ + MK C+PN+ +YN+++D + + LR LE+
Sbjct: 164 CAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMS 222
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ T+ISA A ++ C + + E G D ++ + + Q+
Sbjct: 223 PDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMH 277
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L++++K+ + G LD Y ++ K+G++ L + + + L MY +
Sbjct: 158 LNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAV---MYNTV 214
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D + K + + +M K I D Y++LI F + ++K A +LF + + +
Sbjct: 215 IDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENI 274
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ F LV + +EG ++K V++ M ++ + +V+GF K R
Sbjct: 275 KPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKT 334
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+ ++ QG P VTY S+++ YC + +KA+K+F M Q+G V +Y+ M+ +
Sbjct: 335 VFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFC 394
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K ++ AM+L +M K P+V YNSL+D
Sbjct: 395 KIKKVDKAMKLFIEMHHKHIIPDVVTYNSLID 426
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 119/263 (45%), Gaps = 19/263 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
Y +M + I D Y ++ F+ +G + LF + E+ K D+ + + IL
Sbjct: 231 YSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDV-----YTFNILV 285
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D K GR + M + I + S + +L+ F ++K + +F ++G+
Sbjct: 286 DGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIK 345
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ + L+ Y V K ++ +M + + +++NGF K + A+K+
Sbjct: 346 PNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKL 405
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ ++ + IP VTY S+I+ C+ G S A ++ EM +G ++ Y+S++
Sbjct: 406 FIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILN---- 461
Query: 248 TGRIRDAMRLVAKMKPKGCEPNV 270
L+ K+K +G +PN+
Sbjct: 462 --------ALLTKLKDQGIQPNM 476
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/215 (17%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G L+++ + + ++ + +++G SK + A +Y +++++ P VTY
Sbjct: 187 GETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTY 246
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+++I + +G A +F +M + V ++ +V + K GR++ A ++ M
Sbjct: 247 SALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMI 306
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDM 307
+ +PNV +N+L+D + + +++ + Y +++ Y + ++ +
Sbjct: 307 QDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNK 366
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
K +N G + IM+ F K+ ++++
Sbjct: 367 AKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDK 401
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 109/254 (42%), Gaps = 4/254 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y I F+ D + +LF + LT + KIL SL KS +L +
Sbjct: 37 YSSISTTFHS-NDVDGAVSLFNSLLHQNPTLT--AFEFNKIL-GSLVKSKHYHTVLSLSQ 92
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M+ +GI + + LI F + + A + + + G D+ + + +G
Sbjct: 93 QMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKG 152
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ + L + + ++ ++NG K AA+++ ++ + V Y
Sbjct: 153 QIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYN 212
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++I+ + + A ++ EM K VV YS+++ + G+++DA+ L KM +
Sbjct: 213 TVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILE 272
Query: 265 GCEPNVWIYNSLMD 278
+P+V+ +N L+D
Sbjct: 273 NIKPDVYTFNILVD 286
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 85/197 (43%), Gaps = 26/197 (13%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D+ P+ + + L D K + E F M ++GI + Y SL+ + + +V
Sbjct: 308 DIKPNVS-TFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNK 366
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIV 172
A+++F ++G+ ++ + ++ + + V+K +++ M + + I D ++ ++
Sbjct: 367 AKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHI-IPDVVTYNSLI 425
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY---------------------- 210
+G K A ++ ++ +G P +TY SI+NA
Sbjct: 426 DGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKG 485
Query: 211 -CRIGLYSKAEKVFIEM 226
C+ G A KVF ++
Sbjct: 486 LCQSGKLEAARKVFEDL 502
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 162/348 (46%), Gaps = 20/348 (5%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ GI + Y ++ K +EK ++ + K + ++T Y ++ + G
Sbjct: 39 EMREHGIPPSATVYNAYLDGLLKARCAEKAVEVY---QRMKRERCRTNTETYTLMINVYG 95
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
KS + +K F++M+ G + Y +L+ +FA + AEE+F+E ++ G D+
Sbjct: 96 KSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 155
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ Y G + E+ M++ ++V+ + + + A V+E L
Sbjct: 156 AYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESL 215
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
QG P ++ ++ A+ R G ++ E+V ++ + G +A ++M+ YG+ GR+
Sbjct: 216 KRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRL 275
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE----------------KYTTV 295
D RL+A M+ +G +V YN ++ +GRA L ++E +T+
Sbjct: 276 DDMERLLAAMERRGTR-DVGTYNVAVNAYGRAGYLERMEAAFASLERRGLAADVVTWTSR 334
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ AY +E+ C++ + E G D A ++V S Q+E++
Sbjct: 335 MGAYARKKEYRRCLEIFEEMVDAGCYPDAGTAKVLVAACSDERQVEQV 382
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 104/194 (53%)
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
YA L+ ++ + + AE + E E G+ V+ + ++ EK +EV + M
Sbjct: 16 TYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQRM 75
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
K + +++N + K + +A+KV++++ S GC TY +++NA+ R GL
Sbjct: 76 KRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLC 135
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
KAE+VF EMQQ G + V AY++++ Y + G + A + + M+ GCEP+ YN L
Sbjct: 136 EKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNIL 195
Query: 277 MDMHGRAKNLRQLE 290
+D +GRA R+ E
Sbjct: 196 VDAYGRAGLHREAE 209
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%)
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ + L+ Y G + + V+ M+ + S + ++G K R AV+VY++
Sbjct: 15 DTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQR 74
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + C TY +IN Y + A KVF EMQ G + Y+++V + + G
Sbjct: 75 MKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGL 134
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
A + +M+ G EP+V+ YN+LM+ + RA
Sbjct: 135 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRA 167
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+Y L+ C+P + TYA ++ AYC G +AE V EM++ G Y++ +
Sbjct: 1 MYAALLEARCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLL 60
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
K A+ + +MK + C N Y +++++G++K
Sbjct: 61 KARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQ 99
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 131/275 (47%), Gaps = 3/275 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK+ I D+ Y ++ F K G+ LF E + +K+ P Y + L +
Sbjct: 348 MKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKI--VPDFV-TYTSMIHGLCQ 404
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G+ E K F +M KG+ D Y +LI + E+K A L + EKG+ ++
Sbjct: 405 AGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVT 464
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ LV + G V+ E++ M L + C ++NG K AVK+ E++
Sbjct: 465 YTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMD 524
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P +TY +I++AYC++G +KA ++ M KG +V ++ ++ + +G +
Sbjct: 525 LAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLE 584
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
D RL+ M KG PN +NSLM + N+R
Sbjct: 585 DGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMR 619
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 125/269 (46%), Gaps = 3/269 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ G V D Y I++ + ++ KV L E + + L + + Y + L
Sbjct: 277 QMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLK---PNQYTYNSIISFLC 333
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+GR E + R MK + I D VY +LI F V V +LF E + K ++ D
Sbjct: 334 KTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFV 393
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ ++ + G V + ++ M + L + +++G+ K A ++ Q+
Sbjct: 394 TYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQM 453
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ +G P VTY ++++ C+ G A ++ EM +KG V Y++++ K G I
Sbjct: 454 VEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNI 513
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
A++L+ +M G P+ Y ++MD +
Sbjct: 514 EQAVKLMEEMDLAGFFPDTITYTTIMDAY 542
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 147/340 (43%), Gaps = 19/340 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++MK IV D Y ++ + G + LF E S+ L P Y L D
Sbjct: 380 FDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSK--GLKPDEV-TYTALIDG 436
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+G E M EKG+ + Y +L+ EV +A EL E EKG+ +
Sbjct: 437 YCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPN 496
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G +E+ ++++E M A I++ + K A ++
Sbjct: 497 VCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLR 556
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P VT+ ++N +C G+ E++ M KG ++S++ Y
Sbjct: 557 IMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRN 616
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ--------LEK--------YT 293
+R + + M +G P+ YN L+ H +A+N+++ +EK Y
Sbjct: 617 NMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYN 676
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
++I + ++F+ K + E R +G + ++ + I V V
Sbjct: 677 SLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDV 716
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 109/220 (49%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+T Y I+ L + G+ E M+ +G + D Y+ ++ + + ++ +L
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E + KG+ + + ++ + G V + +V+ MKN + + + +++GF K
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS 370
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
K+++++ + +P VTY S+I+ C+ G +A K+F EM KG V Y
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++++ Y K G +++A L +M KG PNV Y +L+D
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVD 470
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 130/306 (42%), Gaps = 38/306 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M S G+ D Y +++ + K G+ ++ A L + + LTP+ Y L D
Sbjct: 415 FSEMLSKGLKPDEVTYTALIDGYCKAGEMKE--AFSLHNQMVEKGLTPNVV-TYTALVDG 471
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G + +M EKG+ + Y +LI + ++ A +L +E + G D
Sbjct: 472 LCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPD 531
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF--------SKRRAY 181
+ ++ Y + G + K E++ M + L + V++NGF +R
Sbjct: 532 TITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIK 591
Query: 182 W---------------------------AAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
W A +++Y+ + +QG +P TY +I +C+
Sbjct: 592 WMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKAR 651
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A + EM +KGF +Y+S++ + K + +A +L +M+ G IY+
Sbjct: 652 NMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYD 711
Query: 275 SLMDMH 280
+D++
Sbjct: 712 IFVDVN 717
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +V+ + G V+Y I++ C++G +A + I+M+ +G VV+YS +V
Sbjct: 235 TAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIV 294
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRA----------KNLRQL 289
Y + ++ ++L+ +++ KG +PN + YNS++ GR KN R
Sbjct: 295 DGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIF 354
Query: 290 EK---YTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
YTT+IS + + + K ++E + V D
Sbjct: 355 PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPD 391
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 106/246 (43%), Gaps = 29/246 (11%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + E+M AG D+ Y IM+A+ K+G+ K L + L T +
Sbjct: 512 NIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVT-- 569
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ +L + SG + + + M +KGI+ + + + SL+ + ++ E++K
Sbjct: 570 -FNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGM 628
Query: 122 EEKGMLRDLEVFLKLV-----------LMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
+G++ D + L+ ++ + MVEK + + N+
Sbjct: 629 HAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNS----------- 677
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ GF KR+ + A K++E++ + G I + Y ++ G + +E+ +
Sbjct: 678 LIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENT----LELCDEA 733
Query: 231 FDKCVV 236
+KC+V
Sbjct: 734 IEKCLV 739
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 166/362 (45%), Gaps = 27/362 (7%)
Query: 6 KLHYYE----KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
+LH E +M+ GI + Y ++ K SEK ++ + K + ++T
Sbjct: 222 QLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVY---QRMKKERCRTNTE 278
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y ++ + GK+ + L+ FR+MK G + Y +L+ +FA + AEE+F+E
Sbjct: 279 TYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEM 338
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++ G D+ + L+ Y G+ + E+ M++ ++V+ F + +
Sbjct: 339 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLH 398
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++L QG P ++ +++A+ R G ++ E+V ++ + G A ++M
Sbjct: 399 QEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAM 458
Query: 242 VAMYGKTGRIRDAMRLVAKM-KPKGC---EPNVWIYNSLMDMHGRAKNLRQLE------- 290
+ YG+ GR+ D RL A M + G P+ YN +++ +GRA L ++E
Sbjct: 459 LNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLA 518
Query: 291 ---------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+T+ I AY +E+ C++ + E G D A +++ S Q+E
Sbjct: 519 ARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVE 578
Query: 342 EL 343
++
Sbjct: 579 QV 580
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D+ G+ + E + + E + YA L+ ++ ++ AE + E +
Sbjct: 175 YNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQ 234
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ V+ + ++ EK +EV + MK + +++N + K
Sbjct: 235 RNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPM 294
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++++V+ ++ S GC P TY +++NA+ R GL KAE+VF EMQQ G + V AY++++
Sbjct: 295 SSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 354
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y + G + A + + M+ GCEP+ YN L+D GRA
Sbjct: 355 EAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRA 395
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 151/312 (48%), Gaps = 7/312 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+ M GI + ++AF G ++ AL + E KL++ P + +Y IL D+
Sbjct: 162 YQDMVQRGISPSVSVFGTFIKAFCDAGRLKE--ALLITTEMEKLNV-PFNVVIYNILIDA 218
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVK---VAEELFKEAEEKGM 126
G+ G+ E +M+E+GI + Y +LI + + VAE L +E E G+
Sbjct: 219 YGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGL 278
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ F L+ Y EG+ E+ +V MK + + ++N +++RR A +
Sbjct: 279 YPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAAR 338
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+E + QG P TY ++++AY R G + V+ M+ +G V Y +++ +
Sbjct: 339 AFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQ 398
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR-AKNLRQLEKYTTVISAYNMAREF 305
K GR ++A L+ + K +G +P++ +YN L++ + R ++++ + + +A + F
Sbjct: 399 KQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSF 458
Query: 306 DMCVKFYNEFRM 317
C Y R+
Sbjct: 459 TYCTLIYGFLRV 470
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 124/281 (44%), Gaps = 20/281 (7%)
Query: 63 YKILCDSLGKSGRAF-EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ +L +S K G + E+ ++DM ++GI SV+ + I +F +K A + E
Sbjct: 141 FSVLMNSAVKGGGSLKEVWALYQDMVQRGISPSVSVFGTFIKAFCDAGRLKEALLITTEM 200
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF---SKR 178
E+ + ++ ++ L+ Y G +E+ ++ M+ + + ++ G+ +
Sbjct: 201 EKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPK 260
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
R + A + E++ + G P VT+ ++ AY GL +AE+VF M+ +G +Y
Sbjct: 261 RQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSY 320
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE-------- 290
++++ Y + A R ++ +G P V Y +L+D + RA +L ++
Sbjct: 321 TALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKV 380
Query: 291 --------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
Y T++ A+ + EF+ G D
Sbjct: 381 EGCVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPD 421
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 122/274 (44%), Gaps = 18/274 (6%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEK-VAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M+ GI + G Y ++ + + + V A L E L P + +L +
Sbjct: 234 EMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVV-TFTMLLGAY 292
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G G + + F MK +G+ + Y +LI ++A + A F+ ++G+ +
Sbjct: 293 GHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTV 352
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-----VIVNGFSKRRAYWAAV 185
E + L+ Y G +E V +SMK + C++ I++ F K+ Y A
Sbjct: 353 ETYTALLDAYRRAGDLEMVQAVWKSMK-----VEGCVATRVTYMTILDAFQKQGRYKEAR 407
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ E+ +QG P + Y ++N+Y R G + KA + +EM+ GF Y +++ Y
Sbjct: 408 DLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLI--Y 465
Query: 246 GKTGRIRD---AMRLVAKMKPKGCEPNVWIYNSL 276
G R+RD A++ +M +G P+ Y L
Sbjct: 466 GFL-RVRDQTKALKYHREMMNRGQLPDPKTYAKL 498
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 10/231 (4%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMK-EKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
I+ ++L ++L FFR ++ + L DP + L +A A F
Sbjct: 38 NIILEALCGDDLTEQVLSFFRWVRLHEPCLCDPRSFTILFTFLGRMAMPDQALVFFGMLP 97
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN----GFSKR 178
+ + V+ L+ + LE+ ++ E+ V++N G
Sbjct: 98 KDKQFHSVHVYNTLITCLTNCNRYD--LELYHNLAFYEVFPDSVTFSVLMNSAVKGGGSL 155
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ WA +Y+ ++ +G P + + I A+C G +A + EM++ VV Y
Sbjct: 156 KEVWA---LYQDMVQRGISPSVSVFGTFIKAFCDAGRLKEALLITTEMEKLNVPFNVVIY 212
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+ ++ YG+ G++ +A L+ +M+ +G +PNV YN+L+ + AK RQ
Sbjct: 213 NILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQF 263
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MK+ G+ +S Y ++ A+ + EK A F RK + P+ Y L D+
Sbjct: 305 FNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMI--RKQGVNPT-VETYTALLDA 361
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++G + ++ MK +G + Y +++ +F K A +L +E + +G D
Sbjct: 362 YRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPD 421
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L V+ L+ Y+ G K +++ MK A C ++ GF + R A+K +
Sbjct: 422 LMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLIYGFLRVRDQTKALKYHR 481
Query: 190 QLISQGCIPGQVTYASI 206
+++++G +P TYA +
Sbjct: 482 EMMNRGQLPDPKTYAKL 498
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK-AEKVFIEMQQKGFDKCVVAYSSMVA 243
+++Y L P VT++ ++N+ + G K ++ +M Q+G V + + +
Sbjct: 123 LELYHNLAFYEVFPDSVTFSVLMNSAVKGGGSLKEVWALYQDMVQRGISPSVSVFGTFIK 182
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTT 294
+ GR+++A+ + +M+ NV IYN L+D +GR L + E T
Sbjct: 183 AFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMT 233
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 138/270 (51%), Gaps = 3/270 (1%)
Query: 14 KSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
++ G+ + I+ A G + + ALF E R+ + P T Y L K+
Sbjct: 298 QATGLSAKTATLVSIISALANSGRTLEAEALFEEL--RQSGIKPR-TKAYNALLKGYVKT 354
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G + +M+++G+ D Y+ LI ++ + + A + KE E + + VF
Sbjct: 355 GPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVF 414
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
+L+ Y + G +KT +V++ MK+ + V+++ F K A+ +++++S
Sbjct: 415 SRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLS 474
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G P +VT+ ++I+ +C+ G + AE++F M+++G C Y+ M+ YG R D
Sbjct: 475 EGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 534
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
RL+ KMK +G PNV + +L+D++G++
Sbjct: 535 MKRLLGKMKSQGILPNVVTHTTLVDVYGKS 564
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 132/289 (45%), Gaps = 9/289 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M++ + +S + +++ + G+ +K + E +S + + P Y ++ D+
Sbjct: 400 KEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKS--IGVKPDR-QFYNVVIDTF 456
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK + F M +GI D + +LI VAEE+F+ E +G L
Sbjct: 457 GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 516
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y ++ + ++ MK+ + + +V+ + K + A++ E+
Sbjct: 517 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 576
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ S G P Y ++INAY + GL +A F M G ++A +S++ +G+ R
Sbjct: 577 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR 636
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+A ++ MK G +P+V Y +LM K L +++K+ V Y
Sbjct: 637 DAEAFAVLQYMKENGVKPDVVTYTTLM------KALIRVDKFQKVPGVY 679
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 3/266 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q ++MKS G+ D Y +++ F K + F S ++ P +
Sbjct: 428 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIE--PDRV-TW 484
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D K GR + F M+ +G L + Y +I S+ + L + +
Sbjct: 485 NTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKS 544
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+L ++ LV +Y + G +E +E MK+ L S + ++N +++R
Sbjct: 545 QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQ 604
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV + + S G P + S+INA+ ++A V M++ G VV Y++++
Sbjct: 605 AVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMK 664
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPN 269
+ + + + +M GC+P+
Sbjct: 665 ALIRVDKFQKVPGVYEEMIMSGCKPD 690
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 136/299 (45%), Gaps = 31/299 (10%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL +LG+S + +E + +K L P Y +LI + A +++ A L
Sbjct: 171 LYSILIHALGRSEKLYEAFL----LSQKQTLT-PLTYNALIGACARNNDIEKALNLISRM 225
Query: 122 EEKGMLRDLEVFLKLVLMY------IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ G D V LV+ I+ M+++ + +E K EL++ + I+ GF
Sbjct: 226 RQDGYQSDF-VNYSLVIQSLTRCNKIDSVMLQRLYKEIERDK-LELDVQ--LVNDIIMGF 281
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+K A+++ + G T SII+A G +AE +F E++Q G
Sbjct: 282 AKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRT 341
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK- 291
AY++++ Y KTG ++DA +V++M+ +G P+ Y+ L+D + GR ++ R + K
Sbjct: 342 KAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKE 401
Query: 292 ------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
++ +++ Y E+ + E + G DR +++ F K +
Sbjct: 402 METGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN 460
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 139/279 (49%), Gaps = 9/279 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++M G+ D + ++ K G E +L E +R +D Y L
Sbjct: 168 LEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGID---QDIFTYNTL 224
Query: 67 CDSLGKSGR---AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
D++ K G+ AFEI+ +M K IL + Y+++I +A + A LF E +
Sbjct: 225 LDAVCKGGQLDMAFEIMS---EMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKF 281
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D + L+ +Y + G E+ ++V M+N+ + ++ G+ K+ Y
Sbjct: 282 LGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDV 341
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
KV+E++ ++ P +TY+++I+ Y + GLY +A VF E ++ G VV YS+++
Sbjct: 342 VRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALID 401
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
K G + A+ L+ +M +G PNV YNS++D GR
Sbjct: 402 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 440
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 136/302 (45%), Gaps = 19/302 (6%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI--CSFASIAEVKVAE 115
++ + + + + G+SG E +K F MK+ G+ + Y ++I C + E K
Sbjct: 110 NTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGV-EFKRVL 168
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
E+F E GM D F L+ + + G+ E + M N ++ +++
Sbjct: 169 EIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAV 228
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A ++ ++ ++ +P VTY+++I+ Y + G A +F EM+ G
Sbjct: 229 CKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDR 288
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR------------- 282
V+Y++++++Y K GR +AM + +M+ G +V YN+L+ +G+
Sbjct: 289 VSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEE 348
Query: 283 --AKNLR-QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
A+++ L Y+T+I Y+ + + + EF+ G D + ++ K
Sbjct: 349 MKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGL 408
Query: 340 IE 341
+E
Sbjct: 409 VE 410
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 139/313 (44%), Gaps = 35/313 (11%)
Query: 37 DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA------FEILKFFRDMKEKG 90
D + + L ESR S + Y L LG G FE F +E+
Sbjct: 22 DERALENVLLNFESR-----LSGSDDYVFLLRELGNRGDCKKAICCFE----FAVKRERK 72
Query: 91 ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
E + +++I + + +V++A+ +FK A +G + F ++ Y G + +
Sbjct: 73 KNEQGKLASAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAI 132
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV-KVYEQLISQGCIPGQVTYASIINA 209
++ SMK+ L + +++ K + V +++++++ G P ++T+ S++
Sbjct: 133 KIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAV 192
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
+ GL+ A + EM +G D+ + Y++++ K G++ A ++++M K PN
Sbjct: 193 CSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPN 252
Query: 270 VWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGI 329
V Y++++D + +A L D +NE + G +DR
Sbjct: 253 VVTYSTMIDGYAKAGRL-------------------DDARNLFNEMKFLGISLDRVSYNT 293
Query: 330 MVGVFSKLSQIEE 342
++ +++KL + EE
Sbjct: 294 LLSIYAKLGRFEE 306
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 125/298 (41%), Gaps = 38/298 (12%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+++GI D Y ++ + K + V +F E ++R + +P+ Y L D
Sbjct: 313 EMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHV--SPN-LLTYSTLIDVYS 369
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G E + FR+ K+ G+ D +Y++LI + V+ A L E ++G+ ++
Sbjct: 370 KGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 429
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR----RAYWAAVKV 187
+ ++ + E ++ ++ + +EL I D +S V +K R +K+
Sbjct: 430 TYNSIIDAFGRPATTESVVD--DAGQTSELQI-DSLSSSAVEKATKSLVADREDNRIIKI 486
Query: 188 YEQLISQG-------------CI-------------PGQVTYASIINAYCRIGLYSKAEK 221
+ QL ++ CI P VT+++I+NA R + +A
Sbjct: 487 FGQLAAEKAGQAKNSGGQEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEEASM 546
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ E++ FD V + + M + A L ++K YN+L DM
Sbjct: 547 LLEELRL--FDNQVYGVAHGLLMGYRENVWEQAQSLFDEVKLMDSSTASAFYNALTDM 602
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 150/312 (48%), Gaps = 38/312 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y++++ + LD I+ F K GD K AL L ++ L+ + + I+
Sbjct: 225 LRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSK--ALQLLGMAQATGLSAKTATLVSII 282
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+L SGR E F ++++ GI Y +L+ + +K AE + E E++G+
Sbjct: 283 S-ALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGV 341
Query: 127 --------------------------LRDLE---------VFLKLVLMYIEEGMVEKTLE 151
L+++E VF +L+ + + G +KT +
Sbjct: 342 SPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 401
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
V++ MK+ + V+++ F K A+ +++++S+G P +VT+ ++I+ +C
Sbjct: 402 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 461
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ G + AE++F M+++G C Y+ M+ YG R D RL+ KMK +G PNV
Sbjct: 462 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 521
Query: 272 IYNSLMDMHGRA 283
+ +L+D++G++
Sbjct: 522 THTTLVDVYGKS 533
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 132/289 (45%), Gaps = 9/289 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M++ + +S + +++ F G+ +K + E +S + + P Y ++ D+
Sbjct: 369 KEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS--IGVKPDR-QFYNVVIDTF 425
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK + F M +GI D + +LI VAEE+F+ E +G L
Sbjct: 426 GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 485
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y ++ + ++ MK+ + + +V+ + K + A++ E+
Sbjct: 486 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 545
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ S G P Y ++INAY + GL +A F M G ++A +S++ +G+ R
Sbjct: 546 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR 605
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+A ++ MK G +P+V Y +LM K L +++K+ V Y
Sbjct: 606 DAEAFAVLQYMKENGVKPDVVTYTTLM------KALIRVDKFQKVPVVY 648
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 3/266 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q ++MKS G+ D Y +++ F K + F S ++ P +
Sbjct: 397 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIE--PDRV-TW 453
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D K GR + F M+ +G L + Y +I S+ + L + +
Sbjct: 454 NTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKS 513
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+L ++ LV +Y + G +E +E MK+ L S + ++N +++R
Sbjct: 514 QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQ 573
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV + + S G P + S+INA+ ++A V M++ G VV Y++++
Sbjct: 574 AVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMK 633
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPN 269
+ + + + +M GC+P+
Sbjct: 634 ALIRVDKFQKVPVVYEEMIMSGCKPD 659
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 132/295 (44%), Gaps = 23/295 (7%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL +LG+S + +E + +K L P Y +LI + A +++ A L +
Sbjct: 140 LYSILIHALGRSEKLYEAFL----LSQKQTLT-PLTYNALIGACARNNDIEKALNLIAKM 194
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKT--LEVVESMKNAELNISDCISCVIVNGFSKRR 179
+ G D + ++ ++ L + + ++ +L + + I+ GF+K
Sbjct: 195 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 254
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+++ + G T SII+A G +AE +F E++Q G AY+
Sbjct: 255 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 314
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK----- 291
+++ Y KTG ++DA +V++M+ +G P+ Y+ L+D + GR ++ R + K
Sbjct: 315 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 374
Query: 292 --------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
++ +++ + E+ + E + G DR +++ F K +
Sbjct: 375 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN 429
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 150/312 (48%), Gaps = 38/312 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y++++ + LD I+ F K GD K AL L ++ L+ + + I+
Sbjct: 254 LRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSK--ALQLLGMAQATGLSAKTATLVSII 311
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+L SGR E F ++++ GI Y +L+ + +K AE + E E++G+
Sbjct: 312 S-ALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGV 370
Query: 127 --------------------------LRDLE---------VFLKLVLMYIEEGMVEKTLE 151
L+++E VF +L+ + + G +KT +
Sbjct: 371 SPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 430
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
V++ MK+ + V+++ F K A+ +++++S+G P +VT+ ++I+ +C
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ G + AE++F M+++G C Y+ M+ YG R D RL+ KMK +G PNV
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 272 IYNSLMDMHGRA 283
+ +L+D++G++
Sbjct: 551 THTTLVDVYGKS 562
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 132/289 (45%), Gaps = 9/289 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M++ + +S + +++ F G+ +K + E +S + + P Y ++ D+
Sbjct: 398 KEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS--IGVKPDR-QFYNVVIDTF 454
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK + F M +GI D + +LI VAEE+F+ E +G L
Sbjct: 455 GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 514
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y ++ + ++ MK+ + + +V+ + K + A++ E+
Sbjct: 515 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 574
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ S G P Y ++INAY + GL +A F M G ++A +S++ +G+ R
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR 634
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+A ++ MK G +P+V Y +LM K L +++K+ V Y
Sbjct: 635 DAEAFAVLQYMKENGVKPDVVTYTTLM------KALIRVDKFQKVPVVY 677
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 3/266 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q ++MKS G+ D Y +++ F K + F S ++ P +
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIE--PDRV-TW 482
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D K GR + F M+ +G L + Y +I S+ + L + +
Sbjct: 483 NTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKS 542
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+L ++ LV +Y + G +E +E MK+ L S + ++N +++R
Sbjct: 543 QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQ 602
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV + + S G P + S+INA+ ++A V M++ G VV Y++++
Sbjct: 603 AVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMK 662
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPN 269
+ + + + +M GC+P+
Sbjct: 663 ALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 132/295 (44%), Gaps = 23/295 (7%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL +LG+S + +E + +K L P Y +LI + A +++ A L +
Sbjct: 169 LYSILIHALGRSEKLYEAFL----LSQKQTLT-PLTYNALIGACARNNDIEKALNLIAKM 223
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKT--LEVVESMKNAELNISDCISCVIVNGFSKRR 179
+ G D + ++ ++ L + + ++ +L + + I+ GF+K
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+++ + G T SII+A G +AE +F E++Q G AY+
Sbjct: 284 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 343
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK----- 291
+++ Y KTG ++DA +V++M+ +G P+ Y+ L+D + GR ++ R + K
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
Query: 292 --------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
++ +++ + E+ + E + G DR +++ F K +
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN 458
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 136/283 (48%), Gaps = 19/283 (6%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G V D Y +++ EK +LF E K + S + Y IL DS
Sbjct: 450 EMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLF---EEMKRNGIVPSVYTYTILIDSFC 506
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G + K+F +M KG + Y +LI ++ ++ VA+ELF+ +G ++
Sbjct: 507 KAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVV 566
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNA----------ELNISDC------ISCVIVNGF 175
+ L+ + + G +EK ++ M+ +L+ ++C +V+G
Sbjct: 567 TYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGL 626
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A ++ + +++ GC P Q+ Y ++I+ +C+IG A++VF +M ++G+ +
Sbjct: 627 CKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNL 686
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
YSS + K R+ +++++KM C PNV IY ++D
Sbjct: 687 YTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVD 729
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 127/254 (50%), Gaps = 20/254 (7%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
++ + LC + GK +AF+I+ +M KG + D S Y+ +I ++V+ A LF+
Sbjct: 429 SNFARCLCGA-GKFDQAFKIIC---EMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFE 484
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E + G++ + + L+ + + G++++ + + M + + +++ + K +
Sbjct: 485 EMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAK 544
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ------------ 227
A +++E ++ +GC P VTY ++I+ +C+ G KA +++ M+
Sbjct: 545 QMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYF 604
Query: 228 QKGFDKC----VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ + C V+ Y ++V K R+++A L+ M GCEPN +Y++++D +
Sbjct: 605 KLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKI 664
Query: 284 KNLRQLEKYTTVIS 297
L+ ++ T +S
Sbjct: 665 GKLQDAQEVFTKMS 678
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L K+ R E + M G + VY ++I F I +++ A+E+F +
Sbjct: 619 YGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMS 678
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G +L + + DC+ F R
Sbjct: 679 ERGYSPNLYTYSSFI---------------------------DCL-------FKDNRLD- 703
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+KV +++ C P V Y +++ C+IG +A K+ ++M++KG + VV Y++M+
Sbjct: 704 LVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMI 763
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+GK+G+I + L M KGC PN Y L++
Sbjct: 764 DGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLIN 799
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 113/299 (37%), Gaps = 51/299 (17%)
Query: 63 YKIL---CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
Y+IL C G+ GR IL M +G + ++ SLI ++ + A +LFK
Sbjct: 317 YRILLSGCLRKGQLGRCKRILSM---MITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFK 373
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
K++ + G + + + N E SD + V
Sbjct: 374 ---------------KMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLV--------- 409
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
K Y +++ G + +V ++ C G + +A K+ EM KGF YS
Sbjct: 410 -----EKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYS 464
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-------- 291
++ ++ A L +MK G P+V+ Y L+D +A ++Q K
Sbjct: 465 KVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHK 524
Query: 292 --------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I AY A++ + + + + G + ++ K QIE+
Sbjct: 525 GCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEK 583
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 22/194 (11%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+V+G + + A+ + ++ S CIP VTY +++ R G + +++ M +G
Sbjct: 285 MVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEG 344
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN---------------S 275
++S++ Y K+ A +L KM GC+P +YN
Sbjct: 345 CYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSD 404
Query: 276 LMDMHGRA-KNLRQLEKYTTVISAYNMAR------EFDMCVKFYNEFRMNGGVIDRAMAG 328
++D+ +A + L ++ N AR +FD K E G V D +
Sbjct: 405 ILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYS 464
Query: 329 IMVGVFSKLSQIEE 342
++G S++E+
Sbjct: 465 KVIGFLCDASKVEK 478
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 145/309 (46%), Gaps = 38/309 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +++S I LD I+ F K GD + + + L +P + + ++ +
Sbjct: 244 YAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGL--SPKTATLVAVIT-A 300
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG---- 125
LG +GR E F ++KE G++ Y +L+ + +K AE + E E G
Sbjct: 301 LGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPD 360
Query: 126 ----------------------MLRDLE---------VFLKLVLMYIEEGMVEKTLEVVE 154
+L+++E VF +++ Y + G +K+ +V+
Sbjct: 361 EHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLR 420
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M+N+ ++ V+++ F K A+ ++++ +G P VT+ ++I+ +C+ G
Sbjct: 421 EMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSG 480
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
++KAE++F MQ+ G C Y+ M+ +G+ R D L+ KM+ +G NV Y
Sbjct: 481 HHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYT 540
Query: 275 SLMDMHGRA 283
+L+D++G++
Sbjct: 541 TLVDIYGQS 549
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 132/289 (45%), Gaps = 9/289 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+++G+ +S + +I+ ++ G +K + E R ++P H Y ++ D+
Sbjct: 385 KEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM--RNSGVSPDR-HFYNVMIDTF 441
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK L F M+ +G+ D + +LI AEELF+ +E G
Sbjct: 442 GKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCT 501
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ + E+ E ++ M++ L + +V+ + + + A++ E
Sbjct: 502 TTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEV 561
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ S G P Y ++INAY + GL +A F M+ G V+ +S++ +G+ R
Sbjct: 562 MKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRR 621
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+A ++ MK +P+V Y +LM K L ++EK+ V + Y
Sbjct: 622 DAEAFSVLQYMKENDLKPDVVTYTTLM------KALIRVEKFDKVPAVY 664
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/287 (19%), Positives = 133/287 (46%), Gaps = 5/287 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIG--DSEKVAALFLECESRKLDLTPSSTHMYK 64
L+ +M+ G D Y I+++ + DS + ++ E ES K++L +
Sbjct: 204 LNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIEL---DGQLLN 260
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ KSG + F ++ G+ + ++I + + + AE +F+E +E
Sbjct: 261 DIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEG 320
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G++ + L+ Y++ G ++ +V M+ + + + ++++ ++ + +A
Sbjct: 321 GLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESA 380
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V +++ + G P ++ I+ +Y G + K+ +V EM+ G Y+ M+
Sbjct: 381 RIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDT 440
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+GK + A+ +M+ +G +P+ +N+L+D H ++ + + E+
Sbjct: 441 FGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEE 487
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 125/306 (40%), Gaps = 26/306 (8%)
Query: 33 YKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGIL 92
+ +G SEK+ FL S++ LTP + Y L + ++ + L M+ G
Sbjct: 162 HALGRSEKLYEAFLL--SQRQTLTPLT---YNALIGACARNDDLEKALNLMSRMRRDGFP 216
Query: 93 EDPSVYASLICSFASI--AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
D Y+ +I S ++ + ++++ E E + D ++ +++ + + G V + +
Sbjct: 217 SDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAM 276
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
+ ++ L+ ++ A ++E+L G +P Y +++ Y
Sbjct: 277 SFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGY 336
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ G AE + EM++ GF YS ++ Y GR A ++ +M+ G PN
Sbjct: 337 VKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNS 396
Query: 271 WIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIM 330
+++ + ++++Y ++ + E R +G DR +M
Sbjct: 397 YVF-------------------SRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVM 437
Query: 331 VGVFSK 336
+ F K
Sbjct: 438 IDTFGK 443
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 114/266 (42%), Gaps = 3/266 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q +M+++G+ D Y +++ F K + A F + +++ +
Sbjct: 413 QKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATF---DRMRMEGVQPDAVTW 469
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D KSG + + F M+E G + Y +I SF + + L + +
Sbjct: 470 NTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQS 529
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+L ++ + LV +Y + G + +E +E MK+ L S + ++N +++R
Sbjct: 530 QGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQ 589
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ + + + G P + S+INA+ ++A V M++ VV Y++++
Sbjct: 590 AINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMK 649
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPN 269
+ + + +M GC P+
Sbjct: 650 ALIRVEKFDKVPAVYEEMTLSGCTPD 675
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 3/200 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M+ +G + Y ++ +F + E V L + +S+ L ++ Y L D
Sbjct: 489 FEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGL---LANVVTYTTLVDI 545
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+SGR + ++ MK G+ ++Y +LI ++A + A F+ G+
Sbjct: 546 YGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPS 605
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ V L+ + E+ + V++ MK +L ++ + + VYE
Sbjct: 606 VLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYE 665
Query: 190 QLISQGCIPGQVTYASIINA 209
++ GC P + A + +A
Sbjct: 666 EMTLSGCTPDRKARAMLRSA 685
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 141/289 (48%), Gaps = 9/289 (3%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++++M+ G+ D + ++ + G E LF E +R+++ Y L D
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE---QDVFSYNTLLD 382
Query: 69 SLGKSGR---AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
++ K G+ AFEIL M K I+ + Y+++I FA A LF E G
Sbjct: 383 AICKGGQMDLAFEILA---QMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D + L+ +Y + G E+ L+++ M + + ++ G+ K+ Y
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
KV+ ++ + +P +TY+++I+ Y + GLY +A ++F E + G VV YS+++
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTT 294
K G + A+ L+ +M +G PNV YNS++D GR+ + + Y+
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 27/341 (7%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
SK+H+ + + S + A GD E +L L ES+ L S Y
Sbjct: 146 SKMHFGRQKTTMATRHSSAAEDALQNAIDFSGDDEMFHSLMLSFESK---LCGSDDCTYI 202
Query: 65 ILCDSLGKSGRAFEILKF--FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
I LG + + F F +E+ E + +++I + +V +A+ +F+ A
Sbjct: 203 I--RELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAF 260
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G + F L+ Y G+ E+ + V SMK L + +++ K +
Sbjct: 261 AGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEF 320
Query: 183 AAV-KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
V K ++++ G P ++T+ S++ R GL+ A +F EM + ++ V +Y+++
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ K G++ A ++A+M K PNV Y+TVI +
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNV-------------------VSYSTVIDGFAK 421
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
A FD + + E R G +DR ++ +++K+ + EE
Sbjct: 422 AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEE 462
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 127/280 (45%), Gaps = 19/280 (6%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI--CSFASIAEVKVAE 115
++ + + L + G+SG E + F MKE G+ + Y ++I C + E K
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM-EFKQVA 324
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ F E + G+ D F L+ + G+ E + + M N + +++
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A ++ Q+ + +P V+Y+++I+ + + G + +A +F EM+ G
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG-------------- 281
V+Y++++++Y K GR +A+ ++ +M G + +V YN+L+ +G
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 282 --RAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
R L L Y+T+I Y+ + ++ + EF+ G
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 157/339 (46%), Gaps = 21/339 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M AG+ Y ++ + K G ++ ALF E+ K + Y L ++
Sbjct: 53 FEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALF---EAMKEKGCSPNVLTYNTLINA 109
Query: 70 LGKSG-RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K R +++ F +MK+ G+ + Y ++ + ++ A ++ KE + L
Sbjct: 110 CTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLP 169
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + ++ G +++ +E+ E MK + + ++ +++ Y A+ ++
Sbjct: 170 NVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLF 229
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ +GCIP TY ++I+ R GL+++AE VF+EMQ+KG V Y++M+ Y K
Sbjct: 230 VGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKW 289
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKY 292
R A L+ MK GC P++W YN L+D G+A + + L +
Sbjct: 290 SRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSF 349
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVID-RAMAGIM 330
+ +I+ Y F+ + + E R G V + A G+M
Sbjct: 350 SALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLM 388
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 134/280 (47%), Gaps = 6/280 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MK AG+ + Y ++ A + + + + E ++ ++ P+ Y + +S
Sbjct: 124 FEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKA--VNCLPNVIS-YTTMINS 180
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+SGR E ++ F +MKE G + Y SL+ ++A + A LF E++G + D
Sbjct: 181 LGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPD 240
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + ++ M G+ + V M+ +++ +SK A + +
Sbjct: 241 LYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLK 300
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ GC P TY +++A + G S+A ++F E++ G +V++S+++ MYG+ G
Sbjct: 301 TMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLG 360
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNL 286
+A R +M+ GC PN Y LM+ HG K L
Sbjct: 361 YFEEAERAWVEMRATGCVPNATAYCGLMNSYSHHGMYKVL 400
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 132/287 (45%), Gaps = 21/287 (7%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G +A ++ +F ++ E + E V ++I ++ +A E+F+ + G+ +
Sbjct: 8 GARRQALQVFRFLQEHLEYELKEHNCV--TIISILGREGKLGLAREIFEGMSKAGVAPSV 65
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA--VKVY 188
+ L+ Y ++G++++ + E+MK + + ++N +KR AY V ++
Sbjct: 66 HAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKR-AYRLPDLVGLF 124
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ G P +TY ++NA + L+ A ++ EM+ V++Y++M+ G++
Sbjct: 125 EEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRS 184
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-------LEKYTTVISAYNM 301
GR+ +A+ L +MK G PN W YNSL+ + R + +E + Y
Sbjct: 185 GRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTY 244
Query: 302 AREFDMCVK---------FYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
DMC + + E + G DR M+ +SK S+
Sbjct: 245 NTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSR 291
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 137/277 (49%), Gaps = 3/277 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + ++ +G+ + + ++ G +E+ A+F E L T Y L
Sbjct: 291 LEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQ---PRTRAYNAL 347
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
K+G + +M+ G+L + Y+ LI ++ + + A + KE E +
Sbjct: 348 LRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNV 407
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ VF +++ Y ++G +KT +V+ M+++ + V+++ F K A+
Sbjct: 408 QPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMA 467
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++S+G P +T+ ++++ +C+ G + +AE++F EM +KG+ C ++ M+ +G
Sbjct: 468 TFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFG 527
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
R D L+ M+ +G PN Y +L+D++G++
Sbjct: 528 DQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKS 564
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 133/289 (46%), Gaps = 9/289 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+++ + ++ + +I+ ++ G+ +K + E E + P Y +L D+
Sbjct: 400 KEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGV--RPDRI-FYNVLIDTF 456
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK + F M +GI D + +L+ + AEELF+E EKG L
Sbjct: 457 GKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCN 516
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F ++ + ++ + ++ +M++ L + +++ + K + A++ +
Sbjct: 517 TTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDD 576
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + G P Y +++NAY + GL +A F M+ G ++A +S++ +GK R
Sbjct: 577 MKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRR 636
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+A ++ MK +P+V Y +LM K L +EK+ V S Y
Sbjct: 637 DVEAFVVLQYMKENDLKPDVVTYTTLM------KALILVEKFDKVPSVY 679
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 123/274 (44%), Gaps = 5/274 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKI--GDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+M+ G D Y I+ + K +S + ++ E + KL++ ++ +
Sbjct: 224 RMREDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEV---DVQLWNDIIVG 280
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+G + L+F ++ G+ + ++I + + AE +F+E + G+
Sbjct: 281 FAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPR 340
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y++ G++ VV M+ + + ++ ++++ + + +A V +
Sbjct: 341 TRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLK 400
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + P ++ I+ +Y G + K +V EM+ G + Y+ ++ +GK
Sbjct: 401 EMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFN 460
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ AM +M +G EP+ +N+L+D H +A
Sbjct: 461 CLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKA 494
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 137/324 (42%), Gaps = 58/324 (17%)
Query: 33 YKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGIL 92
+ +G SEK+ FL S+K +LTP + Y L + ++ + L M+E G
Sbjct: 177 HALGQSEKLYEAFLL--SQKQNLTPLT---YNALISACARNNDIEKALNLICRMREDGYP 231
Query: 93 EDPSVYASLICSF--ASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
D Y+ +I S + A + +++++E + + D++++ +++ + + G ++K L
Sbjct: 232 SDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKAL 291
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
E + ++ + L++ ++ G C
Sbjct: 292 EFLGVVQGSGLSVKTATLVTVIWGLG------------------NC-------------- 319
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
G +AE +F EM+ G AY++++ Y K G +RDA +V++M+ G PN
Sbjct: 320 ---GRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNE 376
Query: 271 WIYNSLMDMHGRAKN-------LRQLEKYTTVISAYNMAR---------EFDMCVKFYNE 314
Y+ L+D +G A+ L+++E +AY +R E+ + E
Sbjct: 377 QTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLRE 436
Query: 315 FRMNGGVIDRAMAGIMVGVFSKLS 338
+G DR +++ F K +
Sbjct: 437 MEDSGVRPDRIFYNVLIDTFGKFN 460
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 3/221 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S GI D+ + +++ K G ++ LF E + P +T + I+ +S
Sbjct: 469 FDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGY--LPCNT-TFNIMINS 525
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G R ++ +M+ +G+L + Y +LI + A E + + G+
Sbjct: 526 FGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPS 585
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ L+ Y + G+ ++ + +M++ L S ++N F K R A V +
Sbjct: 586 STMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQ 645
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+ P VTY +++ A + + K V+ EM G
Sbjct: 646 YMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILSG 686
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 149/330 (45%), Gaps = 22/330 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ MK + + Y +++ + G + LF E + + +P+S Y L
Sbjct: 77 DDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDK--GESPNS-WTYNALIQGY 133
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G+ G E L+ + +M G +D Y I + ++ E L E + KG+ D
Sbjct: 134 GRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQ 193
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +Y ++ K E++ M A + ++++ K ++ A +++E
Sbjct: 194 VTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFEN 253
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L S+G +P VTY+++++ Y R GLY++A K++ EM + G C++AYS ++ YG G
Sbjct: 254 LKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGM 313
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVK 310
++A+ M+ G P+ IY +LMD +G+A R+ E
Sbjct: 314 YQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAE-------------------L 354
Query: 311 FYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y E G V D GI+V F+ ++
Sbjct: 355 LYFEMTKEGFVPDGITYGILVRAFANAGRL 384
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 133/297 (44%), Gaps = 16/297 (5%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L + L SGR K DMK + + Y +LI +A+ ++ +LF+E
Sbjct: 55 LYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEM 114
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++KG + + L+ Y +G+ ++ LE+ + M + + + KR
Sbjct: 115 KDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLL 174
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
++ +++ ++G P QVTY ++++ Y + + KA ++ EM + G+ + Y+ M
Sbjct: 175 EDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIM 234
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------- 291
++ K + +A +L +K KG PN+ Y++++ ++GR + K
Sbjct: 235 LSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGC 294
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ +I +Y + + + + R +G V D + ++ + K + E
Sbjct: 295 IPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCRE 351
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 92/198 (46%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
L+ MKE G D +Y L+ + ++ AE++ + + + +L + L+
Sbjct: 38 LRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKE 97
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
Y G ++ ++ + MK+ + + ++ G+ ++ + A+++Y+++ GC
Sbjct: 98 YANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKD 157
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
TY I Y + GL E++ EM KG V Y++++ +Y K A ++
Sbjct: 158 VHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILR 217
Query: 260 KMKPKGCEPNVWIYNSLM 277
+M G PN+W YN ++
Sbjct: 218 EMTEAGYRPNIWTYNIML 235
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 170 VIVNGFSKRRAYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
VI++G+ ++++ A+++ E + G P ++ Y ++N G AEK+ +M++
Sbjct: 22 VIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKR 81
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+V Y++++ Y TGR++D +L +MK KG PN W YN+L+ +GR
Sbjct: 82 DKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGR 135
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
++ L ++E MK + + + +VNG AA K+ + + VTY +
Sbjct: 34 LDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTN 93
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+I Y G K+F EM+ KG Y++++ YG+ G ++A+ L +M G
Sbjct: 94 LIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVG 153
Query: 266 CEPNVWIYNSLMDMHGRAKNLRQLEK 291
C +V YN + M+G+ L +E+
Sbjct: 154 CAKDVHTYNIAIAMYGKRGLLEDMER 179
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 149/330 (45%), Gaps = 22/330 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ MK + + Y +++ + G + LF E + + +P+S Y L
Sbjct: 77 DDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDK--GESPNS-WTYNALIQGY 133
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G+ G E L+ + +M G +D Y I + ++ E L E + KG+ D
Sbjct: 134 GRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQ 193
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +Y ++ K E++ M A + ++++ K ++ A +++E
Sbjct: 194 VTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFEN 253
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L S+G +P VTY+++++ Y R GLY++A K++ EM + G C++AYS ++ YG G
Sbjct: 254 LKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGM 313
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVK 310
++A+ M+ G P+ IY +LMD +G+A R+ E
Sbjct: 314 YQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAE-------------------L 354
Query: 311 FYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y E G V D GI+V F+ ++
Sbjct: 355 LYFEMTKEGFVPDGITYGILVRAFANAGRL 384
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 134/297 (45%), Gaps = 16/297 (5%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L + L SGR K DMK+ + + Y +LI +A+ ++ +LF+E
Sbjct: 55 LYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEM 114
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++KG + + L+ Y +G+ ++ LE+ + M + + + KR
Sbjct: 115 KDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLL 174
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
++ +++ ++G P QVTY ++++ Y + + KA ++ EM + G+ + Y+ M
Sbjct: 175 EDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIM 234
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------- 291
++ K + +A +L +K KG PN+ Y++++ ++GR + K
Sbjct: 235 LSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGC 294
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ +I +Y + + + + R +G V D + ++ + K + E
Sbjct: 295 IPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCRE 351
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 93/198 (46%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
L+ MKE G D +Y L+ + ++ AE++ + ++ + +L + L+
Sbjct: 38 LRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKE 97
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
Y G ++ ++ + MK+ + + ++ G+ ++ + A+++Y+++ GC
Sbjct: 98 YANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKD 157
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
TY I Y + GL E++ EM KG V Y++++ +Y K A ++
Sbjct: 158 VHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILR 217
Query: 260 KMKPKGCEPNVWIYNSLM 277
+M G PN+W YN ++
Sbjct: 218 EMTEAGYRPNIWTYNIML 235
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 170 VIVNGFSKRRAYW-AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
VI++G+ ++++ A+++ E + G P ++ Y ++N G AEK+ +M+Q
Sbjct: 22 VIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQ 81
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+V Y++++ Y GR++D +L +MK KG PN W YN+L+ +GR
Sbjct: 82 DKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGR 135
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
++ L ++E MK + + + +VNG AA K+ + + VTY +
Sbjct: 34 LDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTN 93
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+I Y G K+F EM+ KG Y++++ YG+ G ++A+ L +M G
Sbjct: 94 LIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVG 153
Query: 266 CEPNVWIYNSLMDMHGRAKNLRQLEK 291
C +V YN + M+G+ L +E+
Sbjct: 154 CAKDVHTYNIAIAMYGKRGLLEDMER 179
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 138/271 (50%), Gaps = 7/271 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y + M + ++ D Y ++ + ++G+ + LF E S+ +L PS Y L D
Sbjct: 334 YLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSK--NLVPSVV-TYNTLID 390
Query: 69 SLGKSGRAFEILKFFRD-MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++G +I K +D M + G+ D + L+ F + + +A+ELF E +G+
Sbjct: 391 GGCRTGN-LDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLK 449
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVK 186
D + ++ ++ G K + E MK AE D I+ V++NG K + A +
Sbjct: 450 PDCIAYTTRIVGELKLGNPSKAFGMKEEMK-AEGFPPDLITYNVLINGLCKLGNFDDANE 508
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ +++ +G +P VTY SII+A+ GL KAE+VF +M +KG VV Y+ ++ Y
Sbjct: 509 LVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYA 568
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ A + +M+ KG PNV YN+L+
Sbjct: 569 VRGRLDFAKKYFDEMQDKGVSPNVITYNALI 599
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 142/329 (43%), Gaps = 27/329 (8%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M G+ + + Y ++ F K E+ L E R + Y + SL
Sbjct: 266 EQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRG---ALPTVVTYNTIMYSL 322
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ GR + ++ M + ++ D Y +LI ++ + A LF E K ++ +
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSV 382
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV----IVNGFSKRRAYWAAVK 186
+ L I+ G L++ + MK+ + C V +V GF + A +
Sbjct: 383 VTYNTL----IDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKE 438
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++++++S+G P + Y + I ++G SKA + EM+ +GF ++ Y+ ++
Sbjct: 439 LFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLC 498
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--------------- 291
K G DA LV KM+ +G P+ Y S++ H + LR+ E+
Sbjct: 499 KLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVV 558
Query: 292 -YTTVISAYNMAREFDMCVKFYNEFRMNG 319
YT +I +Y + D K+++E + G
Sbjct: 559 TYTVLIHSYAVRGRLDFAKKYFDEMQDKG 587
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 119/269 (44%), Gaps = 7/269 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILCD 68
+ M G+ D + ++ F ++G+ LF E SR L D +T + L
Sbjct: 406 DDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGEL-- 463
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
LG +AF + + +MK +G D Y LI + A EL ++ +G++
Sbjct: 464 KLGNPSKAFGMKE---EMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVP 520
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + ++ ++ G++ K EV M ++ S V+++ ++ R A K +
Sbjct: 521 DHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYF 580
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ +G P +TY ++I C+ + A +F EM+ KG Y+ ++
Sbjct: 581 DEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNL 640
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+DA++L M + +P+ +++LM
Sbjct: 641 QYWQDALKLYKDMLDREIKPDSCTHSALM 669
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 76/144 (52%)
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
+G ++ E++E M L +S ++ GF K+ + A + +++ +G +P VT
Sbjct: 255 KGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVT 314
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y +I+ + CR+G S A + M + +V+Y++++ Y + G +A+ L ++++
Sbjct: 315 YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNL 286
K P+V YN+L+D R NL
Sbjct: 375 SKNLVPSVVTYNTLIDGGCRTGNL 398
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%)
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+EG V + +EV++ M+ + +D V+VNG S + + A ++ EQ+ G
Sbjct: 219 KEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAH 278
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY +I +C+ ++ +A + EM +G VV Y++++ + GR+ DA R + M
Sbjct: 279 TYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVM 338
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ P++ YN+L+ + R N +
Sbjct: 339 VNEDLMPDLVSYNTLIYGYSRLGNFAE 365
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 109/248 (43%), Gaps = 3/248 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S G+ D Y + K+G+ K + E K + P Y +L +
Sbjct: 440 FDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGM---KEEMKAEGFPPDLITYNVLING 496
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G + + + M+ +GI+ D Y S+I + ++ AEE+F + +KG+
Sbjct: 497 LCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPS 556
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y G ++ + + M++ ++ + ++ G K A ++
Sbjct: 557 VVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFA 616
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ S+G P + TY +IN + + A K++ +M + +S+++ K
Sbjct: 617 EMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDY 676
Query: 250 RIRDAMRL 257
++ +RL
Sbjct: 677 KLLAVLRL 684
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 90/216 (41%), Gaps = 16/216 (7%)
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+F + G+L D+ +++ + ++ MV + EV M ++ + +++
Sbjct: 159 VFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRC 218
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K AV+V + + GC P V+Y ++N G + +A+++ +M G
Sbjct: 219 KEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAH 278
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQ----- 288
Y+ ++ + K +A L +M +G P V YN++M GR + R+
Sbjct: 279 TYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVM 338
Query: 289 --------LEKYTTVISAYNMAREFDMCVKFYNEFR 316
L Y T+I Y+ F + ++E R
Sbjct: 339 VNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D+ G+ + + ++ E + YA L+ ++ + ++ AE +F E
Sbjct: 171 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 230
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G V+ + ++ G +K +E+ E MK S +++N + K +
Sbjct: 231 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSY 290
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+KV+ ++ SQ C P T+ +++NA+ R GL KAE++F ++Q+ G + V AY++++
Sbjct: 291 MALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALM 350
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-------------KNL--- 286
Y + G A + + M+ GCEP+ YN ++D +GRA K L
Sbjct: 351 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGIT 410
Query: 287 RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
++ + ++SAY+ A + C + N+ +G D + M+ ++ +L Q E++
Sbjct: 411 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKM 467
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 141/301 (46%), Gaps = 12/301 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y ++ A V Y +++A+ G EK A+F E RK PS+ +Y D
Sbjct: 191 YLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVF--AEMRKYGFPPSAV-VYNAYIDG 247
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G + ++ F MK + Y LI + ++ +A ++F E + +
Sbjct: 248 LMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPN 307
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F LV + EG+ EK E+ E ++ A L ++ +S+ + A +++
Sbjct: 308 ICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFS 367
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ GC P + +Y +++AY R GL+ A+ VF M++ G + ++ +++ Y + G
Sbjct: 368 LMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAG 427
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------YTTVISAYN 300
++ +V +M G +P+ ++ NS+++++GR ++E+ Y IS YN
Sbjct: 428 KVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYN 487
Query: 301 M 301
+
Sbjct: 488 I 488
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 154/370 (41%), Gaps = 59/370 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ G + Y ++ K GD++K +F E K D ST Y +L +
Sbjct: 226 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIF---ERMKRDRCQPSTATYTMLINL 282
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK+ +++ LK F +M+ + + + +L+ +FA + AEE+F++ +E G+ D
Sbjct: 283 YGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 342
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y G E+ M++ ++V+ + + + A V+E
Sbjct: 343 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 402
Query: 190 -----------------------------------QLISQGCIPGQVTYASIINAYCRIG 214
Q+ G P S++N Y R+G
Sbjct: 403 VMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLG 462
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ K E+V M++ + + Y+ ++ +YG+ G A+M+ ++
Sbjct: 463 QFEKMEEVLTAMEKGPYPADISTYNILINIYGRAG-------FFARMEE--------LFR 507
Query: 275 SLMDMHGRAKNL-RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
SL A+NL + +T+ I AY+ ++++ C++ + E G D A +++
Sbjct: 508 SL-----PARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSA 562
Query: 334 FSKLSQIEEL 343
S QI+E+
Sbjct: 563 CSNGDQIQEV 572
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 22/138 (15%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV---AYSSMVAMYGKTGRIRDA 254
P + Y +I+AY + LY KAE ++E+ + +CV Y+ ++ Y +G + A
Sbjct: 166 PDVICYNLLIDAYGQKSLYKKAESTYLELLEA---RCVPTEDTYALLLKAYCTSGLLEKA 222
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMD--MHG-----------RAKNLR---QLEKYTTVISA 298
+ A+M+ G P+ +YN+ +D M G R K R YT +I+
Sbjct: 223 EAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINL 282
Query: 299 YNMAREFDMCVKFYNEFR 316
Y A + M +K ++E R
Sbjct: 283 YGKASKSYMALKVFHEMR 300
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D+ G+ + + ++ E + YA L+ ++ + ++ AE +F E
Sbjct: 209 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 268
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G V+ + ++ G +K +E+ E MK S +++N + K +
Sbjct: 269 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSY 328
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+KV+ ++ SQ C P T+ +++NA+ R GL KAE++F ++Q+ G + V AY++++
Sbjct: 329 MALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALM 388
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-------------KNL--- 286
Y + G A + + M+ GCEP+ YN ++D +GRA K L
Sbjct: 389 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGIT 448
Query: 287 RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
++ + ++SAY+ A + C + N+ +G D + M+ ++ +L Q E++
Sbjct: 449 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKM 505
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 141/301 (46%), Gaps = 12/301 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y ++ A V Y +++A+ G EK A+F E RK PS+ +Y D
Sbjct: 229 YLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVF--AEMRKYGFPPSAV-VYNAYIDG 285
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G + ++ F MK + Y LI + ++ +A ++F E + +
Sbjct: 286 LMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPN 345
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F LV + EG+ EK E+ E ++ A L ++ +S+ + A +++
Sbjct: 346 ICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFS 405
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ GC P + +Y +++AY R GL+ A+ VF M++ G + ++ +++ Y + G
Sbjct: 406 LMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAG 465
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------YTTVISAYN 300
++ +V +M G +P+ ++ NS+++++GR ++E+ Y IS YN
Sbjct: 466 KVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYN 525
Query: 301 M 301
+
Sbjct: 526 I 526
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 154/370 (41%), Gaps = 59/370 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ G + Y ++ K GD++K +F E K D ST Y +L +
Sbjct: 264 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIF---ERMKRDRCQPSTATYTMLINL 320
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK+ +++ LK F +M+ + + + +L+ +FA + AEE+F++ +E G+ D
Sbjct: 321 YGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 380
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y G E+ M++ ++V+ + + + A V+E
Sbjct: 381 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 440
Query: 190 -----------------------------------QLISQGCIPGQVTYASIINAYCRIG 214
Q+ G P S++N Y R+G
Sbjct: 441 VMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLG 500
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ K E+V M++ + + Y+ ++ +YG+ G A+M+ ++
Sbjct: 501 QFEKMEEVLTAMEKGPYPADISTYNILINIYGRAG-------FFARMEE--------LFR 545
Query: 275 SLMDMHGRAKNL-RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
SL A+NL + +T+ I AY+ ++++ C++ + E G D A +++
Sbjct: 546 SL-----PARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSA 600
Query: 334 FSKLSQIEEL 343
S QI+E+
Sbjct: 601 CSNGDQIQEV 610
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 22/138 (15%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV---AYSSMVAMYGKTGRIRDA 254
P + Y +I+AY + LY KAE ++E+ + +CV Y+ ++ Y +G + A
Sbjct: 204 PDVICYNLLIDAYGQKSLYKKAESTYLELLEA---RCVPTEDTYALLLKAYCTSGLLEKA 260
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMD--MHG-----------RAKNLR---QLEKYTTVISA 298
+ A+M+ G P+ +YN+ +D M G R K R YT +I+
Sbjct: 261 EAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINL 320
Query: 299 YNMAREFDMCVKFYNEFR 316
Y A + M +K ++E R
Sbjct: 321 YGKASKSYMALKVFHEMR 338
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 164/351 (46%), Gaps = 22/351 (6%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y+ +M S G++ + G Y ++E K G+ + ++F SR++ Y +L
Sbjct: 552 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV---LQDVQTYSVLIH 608
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L ++G+ E F +++EKG+L + Y SLI V A +L +E KG+
Sbjct: 609 GLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 668
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKV 187
D+ + L+ + G +E+ + + ++ L +C++ +V+G+ K + AA ++
Sbjct: 669 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT-PNCVTYAAMVDGYCKSKNPTAAFQL 727
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
E+++ +G P Y I+N C+ + KA +F EM +KGF V++++++ Y K
Sbjct: 728 LEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCK 786
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNL----------RQLEK 291
+G++++A L+ +M K PN Y SL+D M G AK L +
Sbjct: 787 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKT 846
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT+++ Y+ + E G D+ +M+ + + + E
Sbjct: 847 YTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 897
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 161/377 (42%), Gaps = 57/377 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--------------------CE 49
++ M + ++ D Y ++ A K+G+ + + LE C
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262
Query: 50 SRKLD-------------LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
+R LD L P + Y IL + R+ E +M + G+ +P
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPD-LYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 321
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
Y +LI F +++ A + E G+ +L ++ L+ + G +EK LE+++ M
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ +++ G + + A ++ +++ + P +TY+ IIN CR G
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 441
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+ EM G V Y++++ + K GR+ ++ ++ +M+ +G P+V+ YNSL
Sbjct: 442 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 501
Query: 277 MDMHGRAKNLRQ--------LEK--------YTTVISAYNMAREFDMCVKFYNEFRMNGG 320
+ +AK + + LE+ Y I Y+ A E ++ +++NE ++ G
Sbjct: 502 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM-LSCG 560
Query: 321 VIDRAMAGIMVGVFSKL 337
V+ VG+++ L
Sbjct: 561 VLPN------VGIYTAL 571
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 126/274 (45%), Gaps = 3/274 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++M G+ DS Y ++E + + + L E + RKL T Y
Sbjct: 372 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPT---VLTY 428
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ + L + G R+M G+ + VY +L+ + A V+ + + + E
Sbjct: 429 SVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 488
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+L D+ + L++ + + +E+ + M L + ++G+SK
Sbjct: 489 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 548
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A + + +++S G +P Y ++I +C+ G ++A VF + + + V YS ++
Sbjct: 549 ADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIH 608
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G++ +A + ++++ KG PN + YNSL+
Sbjct: 609 GLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLI 642
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 6/268 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M GI D Y +++ K G+ E+ LF + E R LTP+ Y + D
Sbjct: 659 EEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR--GLTPNCV-TYAAMVDGY 715
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE-VKVAEELFKEAEEKGMLRD 129
KS + +M +G+ D +Y ++I +F E + A +LF+E EKG
Sbjct: 716 CKSKNPTAAFQLLEEMLLRGVPPDAFIY-NVILNFCCKEEKFEKALDLFQEMLEKGFAST 774
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ Y + G +++ ++E M + + +++ K A +++
Sbjct: 775 VS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWL 833
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + +P TY S+++ Y IG S+ +F EM KG + + Y M+ Y + G
Sbjct: 834 EMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG 893
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ +A +L ++ KG +V Y++L+
Sbjct: 894 NVMEACKLKDEILVKGMPMSVAAYDALI 921
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 126/285 (44%), Gaps = 4/285 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
++KL E M G+ + Y +++ F + GD E+ + E + ++ ++ ++
Sbjct: 303 EAKLMLLE-MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIE---ANLIIW 358
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + + K+G+ + L+ ++M EKG+ D Y+ LI + A EL E ++
Sbjct: 359 NTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK 418
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + + + ++ G ++ T ++ M L + + ++ +K
Sbjct: 419 RKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEE 478
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+ + E++ QG +P Y S+I +C+ +A +EM ++ Y + +
Sbjct: 479 SRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFID 538
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
Y K G + A R +M G PNV IY +L++ H + N+ +
Sbjct: 539 GYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 583
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG----FSKRRAYWAAVKV 187
+F L+ Y + G + + + V KN E S +SC + G +K +W KV
Sbjct: 147 IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPS-LLSCNSLLGDLLKGNKVELFW---KV 202
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ + + +P TY ++I+A+C++G A++V +EM +KG +V Y+ ++ +
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +A+ L M KG P+++ Y+ L++
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILIN 293
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 38/160 (23%)
Query: 164 SDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
SD I C+I N S + VK Y S P V + ++++Y ++G +A VF
Sbjct: 112 SDLIKCIIRNSDSPLAVLGSIVKCYR---SCNGSPNSVIFDMLMDSYRKMGFLVEAVNVF 168
Query: 224 ---------------------------IEMQQKGFDKC--------VVAYSSMVAMYGKT 248
+E+ K FD V Y++M++ + K
Sbjct: 169 LGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKV 228
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G ++DA R++ +M KGC PN+ YN ++ RA+ L +
Sbjct: 229 GNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDE 268
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 112/284 (39%), Gaps = 4/284 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + E+M G+ D+ Y I+ K EK LF E + +ST
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF----ASTV 775
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ L + KSG+ E +M EK + + Y SLI + A+ L+ E
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+E+ ++ + + L+ Y G + + + E M + V+++ + +
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 895
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K+ ++++ +G Y ++I A C+ + + K+ E+ + GF + S +
Sbjct: 896 MEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVI 955
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+ G + +A ++ M G N L+D + N
Sbjct: 956 ARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGAN 999
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 82/199 (41%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D K+G E + + +M+E+ ++ Y SL+ + +I + LF+E
Sbjct: 812 YTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMV 871
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D + ++ Y EG V + ++ + + + +S ++ K+ ++
Sbjct: 872 AKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFF 931
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+K+ ++ G G T + I + G +A +V M + G+ + +V
Sbjct: 932 EVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLV 991
Query: 243 AMYGKTGRIRDAMRLVAKM 261
D+ L+ +M
Sbjct: 992 DGNQNGANSEDSDNLLKQM 1010
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 138/277 (49%), Gaps = 9/277 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M S G+ D + ++ + G E LF + +D Y L D+
Sbjct: 284 FDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGID---QDIFTYNTLLDA 340
Query: 70 LGKSGR---AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ K G+ AFEI+ +M K IL + Y+++I +A + + A +F E + G+
Sbjct: 341 VCKGGQMDLAFEIMS---EMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGV 397
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ +Y + G E+ L+V + M+NA + ++ G+ K+ Y +
Sbjct: 398 GLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRR 457
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+E++ P +TY+++I+ Y + GLY +A +VF E +Q G VV YS+++
Sbjct: 458 VFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALC 517
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
K G + ++ L+ +M +G PNV YNS++D GR+
Sbjct: 518 KNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRS 554
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 135/283 (47%), Gaps = 22/283 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDM--KEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y L LG G + + ++ F +E G E + +++I + + +V++A+ +F
Sbjct: 156 YTFLLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDT 215
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
A ++G + + F L+ Y G + ++V +SMK+ L + +++ K
Sbjct: 216 ALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGV 275
Query: 181 -YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+ V++++ ++S G P ++T+ S++ R GL+ A ++F M KG D+ + Y+
Sbjct: 276 EFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYN 335
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+++ K G++ A ++++M K PNV Y++++D + + L
Sbjct: 336 TLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRL------------- 382
Query: 300 NMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
D + +NE + G +DR ++ V++KL + E+
Sbjct: 383 ------DDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQ 419
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 113/224 (50%), Gaps = 5/224 (2%)
Query: 63 YKILCDSLGKSGRAFE-ILKFFRDMKEKGILEDPSVYASL--ICSFASIAEVKVAEELFK 119
Y + D+ GK G F+ +++ F M G+ D + SL +CS + E A LF
Sbjct: 263 YNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEA--ARRLFS 320
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
+KG+ +D+ + L+ + G ++ E++ M + + +++G++K
Sbjct: 321 AMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVG 380
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+ ++ ++ G +V+Y ++++ Y ++G + +A V EM+ G K VV Y+
Sbjct: 381 RLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYN 440
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+++A YGK R + R+ +MK PN+ Y++L+D++ +
Sbjct: 441 ALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKG 484
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 132/301 (43%), Gaps = 19/301 (6%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI--CSFASIAEVKVAEE 116
+ + + L + G+SG E +K F MK G++ + Y ++I C + E K E
Sbjct: 224 TVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGV-EFKKVVE 282
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+F G+ D F L+ + G+ E + +M + ++ +++
Sbjct: 283 IFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVC 342
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A ++ ++ ++ +P VTY+++I+ Y ++G A +F EM+ G V
Sbjct: 343 KGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRV 402
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG--------------- 281
+Y++++++Y K GR A+ + +M+ G +V YN+L+ +G
Sbjct: 403 SYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEM 462
Query: 282 -RAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
R + L Y+T+I Y+ + ++ + EF+ G D + ++ K +
Sbjct: 463 KRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLV 522
Query: 341 E 341
E
Sbjct: 523 E 523
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 44/209 (21%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECES---RKLDLTPSSTHMY 63
L+ + +MK G+ LD Y ++ + K+G E+ + E E+ RK +T Y
Sbjct: 386 LNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVT------Y 439
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L GK R E+ + F +MK + + Y++LI ++ K A E+F+E ++
Sbjct: 440 NALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQ 499
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D+ ++ L+ + G+VE +
Sbjct: 500 AGLKADVVLYSALIDALCKNGLVE-----------------------------------S 524
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCR 212
+V + +++ +G P VTY SII+A+ R
Sbjct: 525 SVTLLDEMTKEGIRPNVVTYNSIIDAFGR 553
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 112/291 (38%), Gaps = 55/291 (18%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MK + + Y +++ + K G ++ +F E + L + +Y L D+
Sbjct: 459 FEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLK---ADVVLYSALIDA 515
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFA---------------------SI 108
L K+G + +M ++GI + Y S+I +F S+
Sbjct: 516 LCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVESL 575
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ + V E + +A +K R +E+F KL EK E S K I
Sbjct: 576 SSIVVQEAIESQAADKEDNRIIEIFGKLA--------AEKACEAKNSGKQE-------IL 620
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
C++ V++++ P VT+++I+NA R + A + E++
Sbjct: 621 CIL--------------GVFQKMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEELRL 666
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
FD V + + M + A L ++K YN+L DM
Sbjct: 667 --FDNQVYGVAHGLLMGYRENVWLQAQSLFDEVKLMDSSTASAFYNALTDM 715
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 20/350 (5%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y+ +M S G++ + G Y ++E K G+ + ++F SR++ Y +L
Sbjct: 543 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV---LQDVQTYSVLIH 599
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L ++G+ E F +++EKG+L + Y SLI V A +L +E KG+
Sbjct: 600 GLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 659
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ + G +E+ + + ++ L + +V+G+ K + AA ++
Sbjct: 660 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLL 719
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E+++ +G P Y I+N C+ + KA +F EM +KGF V++++++ Y K+
Sbjct: 720 EEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKS 778
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNL----------RQLEKY 292
G++++A L+ +M K PN Y SL+D M G AK L + Y
Sbjct: 779 GKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTY 838
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
T+++ Y+ + E G D+ +M+ + + + E
Sbjct: 839 TSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 888
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 161/359 (44%), Gaps = 39/359 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLD------------- 54
++ M + ++ D Y ++ A K+G+ + + LE ++R LD
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L P + Y IL + R+ E +M + G+ +P Y +LI F +++ A
Sbjct: 272 LVPD-LYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+ E G+ +L ++ L+ + G +EK LE+++ M + +++ G
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+ + A ++ +++ + P +TY+ IIN CR G + EM G
Sbjct: 391 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPN 450
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ------ 288
V Y++++ + K GR+ ++ ++ +M+ +G P+V+ YNSL+ +AK + +
Sbjct: 451 AVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM 510
Query: 289 --LEK--------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
LE+ Y I Y+ A E ++ +++NE ++ GV+ VG+++ L
Sbjct: 511 EMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM-LSCGVLPN------VGIYTAL 562
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 126/274 (45%), Gaps = 3/274 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++M G+ DS Y ++E + + + L E + RKL T Y
Sbjct: 363 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPT---VLTY 419
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ + L + G R+M G+ + VY +L+ + A V+ + + + E
Sbjct: 420 SVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 479
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+L D+ + L++ + + +E+ + M L + ++G+SK
Sbjct: 480 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 539
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A + + +++S G +P Y ++I +C+ G ++A VF + + + V YS ++
Sbjct: 540 ADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIH 599
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G++ +A + ++++ KG PN + YNSL+
Sbjct: 600 GLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLI 633
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 117/256 (45%), Gaps = 6/256 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M GI D Y +++ K G+ E+ LF + E R LTP+ Y + D
Sbjct: 650 EEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR--GLTPNCV-TYAAMVDGY 706
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE-VKVAEELFKEAEEKGMLRD 129
KS + +M +G+ D +Y ++I +F E + A +LF+E EKG
Sbjct: 707 CKSKNPTAAFQLLEEMLLRGVPPDAFIY-NVILNFCCKEEKFEKALDLFQEMLEKGFAST 765
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ Y + G +++ ++E M + + +++ K A +++
Sbjct: 766 VS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWL 824
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + +P TY S+++ Y IG S+ +F EM KG + + Y M+ Y + G
Sbjct: 825 EMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG 884
Query: 250 RIRDAMRLVAKMKPKG 265
+ +A +L ++ KG
Sbjct: 885 NVMEACKLKDEILVKG 900
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 126/285 (44%), Gaps = 4/285 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
++KL E M G+ + Y +++ F + GD E+ + E + ++ ++ ++
Sbjct: 294 EAKLMLLE-MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIE---ANLIIW 349
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + + K+G+ + L+ ++M EKG+ D Y+ LI + A EL E ++
Sbjct: 350 NTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK 409
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + + + ++ G ++ T ++ M L + + ++ +K
Sbjct: 410 RKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEE 469
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+ + E++ QG +P Y S+I +C+ +A +EM ++ Y + +
Sbjct: 470 SRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFID 529
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
Y K G + A R +M G PNV IY +L++ H + N+ +
Sbjct: 530 GYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 574
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 25/178 (14%)
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG----FSKRRAYWAAVKV 187
+F L+ Y + G + + + V KN E S +SC + G +K +W KV
Sbjct: 156 IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPS-LLSCNSLLGDLLKGNKVELFW---KV 211
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG-------------FDKC 234
++ + + +P TY ++I+A+C++G A++V +EM +K DK
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271
Query: 235 VV----AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+V Y ++ + R R+A ++ +M G +P YN+L+D R ++ Q
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 329
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 73/171 (42%), Gaps = 5/171 (2%)
Query: 164 SDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
SD I C+I N S + VK Y S P V + ++++Y ++G +A VF
Sbjct: 121 SDLIKCIIRNSDSPLAVLGSIVKCYR---SCNGSPNSVIFDMLMDSYRKMGFLVEAVNVF 177
Query: 224 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ + F +++ +S++ K ++ ++ M P+V+ Y +++ H +
Sbjct: 178 LGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKV 237
Query: 284 KNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
N++ ++ ++ AR D ++ G V D I++ F
Sbjct: 238 GNVKDAKR--VLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGF 286
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 144/282 (51%), Gaps = 8/282 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKIL 66
Y+++M G++ ++ Y ++ +K G+ + ++F + + D+ S ++ +L
Sbjct: 476 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLL 535
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
K+GR E LK F ++KEKG++ D Y+SLI F EV+ A EL E KG+
Sbjct: 536 -----KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 590
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ ++ LV + G +++ ++ + M L +++G+ K A
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ ++ S+G P Y ++++ C+ G KA +F EM QKGF +++++++ Y
Sbjct: 651 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYC 709
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
K+ +I++A +L +M K P+ Y +++D H +A + +
Sbjct: 710 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 751
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 121/266 (45%), Gaps = 20/266 (7%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L GR E + M G+ D Y ++I + +++ A E
Sbjct: 386 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 445
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ +G+ D F +L Y + G + + + + M + L ++ + V++NG K
Sbjct: 446 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 505
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+ ++ L + G +P T ++ I+ + G +A KVF E+++KG V YSS+
Sbjct: 506 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 565
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------- 291
++ + K G + A L +M KG PN++IYN+L+D ++ ++++ K
Sbjct: 566 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 625
Query: 292 ------YTTVISAY----NMAREFDM 307
Y+T+I Y N+A F +
Sbjct: 626 EPDSVTYSTMIDGYCKSENVAEAFSL 651
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 112/238 (47%), Gaps = 1/238 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L P+ T+ Y I+ L ++ R E F +M++ G+ D + ++LI F ++
Sbjct: 205 LVPN-TYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 263
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+ G+ +L + L+ + G +EK E+++ M + C+++ G
Sbjct: 264 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 323
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+ + A+++ +++ + +P V+Y ++IN C S A K+ +M G
Sbjct: 324 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 383
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
VV YS+++ Y GRI +A RL+ M G P+++ YN+++ +A + + Y
Sbjct: 384 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 441
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 121/276 (43%), Gaps = 16/276 (5%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
R M EKG++ + Y + + A+ F+E ++ G+ D L+ ++
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 256
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
EG +++ L + + M + + I+ V+++G K A ++ + +I+ GC P T
Sbjct: 257 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 316
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
+ +I YCR +A ++ EM+++ V+Y +M+ + A +L+ KM
Sbjct: 317 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 376
Query: 263 PKGCEPNVWIYNSLM---DMHGRAKNLRQLEK-------------YTTVISAYNMAREFD 306
G +PNV +Y++L+ GR + R+L Y +IS + A + +
Sbjct: 377 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 436
Query: 307 MCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ E + G D G + +SK ++ E
Sbjct: 437 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 472
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 139/358 (38%), Gaps = 42/358 (11%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHM 62
Q L + ++K G+V D Y ++ F K G+ EK L E C L + +
Sbjct: 541 QEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMC----LKGIAPNIFI 596
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L KSG K F M EKG+ D Y+++I + V A LF E
Sbjct: 597 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 656
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ V+ LV +EG +EK + + M + + +++G+ K
Sbjct: 657 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN-TLIDGYCKSCKIQ 715
Query: 183 AAVKVYEQLISQGCIPGQVTYA-----------------------------------SII 207
A ++++++I++ +P VTY S++
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
Y ++G S+ +F +M KG V Y ++ + K + +A +L ++ KG
Sbjct: 776 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 835
Query: 268 PNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
I++ L+ + ++L + K + + C F G +D A
Sbjct: 836 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFH-EAGKMDEA 892
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 127/312 (40%), Gaps = 44/312 (14%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M S GI ++ Y ++ K G EK A + + L P+S + +L + +
Sbjct: 270 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT--LGCKPNS-RTFCLLIEGYCR 326
Query: 73 S---GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GRA E+L +M+++ ++ Y ++I ++ +A +L ++ G+ +
Sbjct: 327 EHNMGRALELLD---EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 383
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ V+ L++ Y EG +E+ +++ M SC
Sbjct: 384 VVVYSTLIMGYASEGRIEEARRLLDGM-----------SC-------------------- 412
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
G P Y +II+ + G +A +E+Q +G V + + + Y KTG
Sbjct: 413 ----SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTG 468
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
++ +A + +M G PN +Y L++ H +A NL + + A + + C
Sbjct: 469 KMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCS 528
Query: 310 KFYNEFRMNGGV 321
F + NG V
Sbjct: 529 AFIHGLLKNGRV 540
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 134/305 (43%), Gaps = 42/305 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M G+ DS Y +++ + K + + +LF E S+ + P S +Y L
Sbjct: 617 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ--PHS-FVYNALVHG 673
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G + + FR+M +KG S + +LI + +++ A +LF+E K ++ D
Sbjct: 674 CCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 732
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + + G +E+ + + M+ L + ++ G++K ++E
Sbjct: 733 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFE 792
Query: 190 QLISQGCIPGQVTYASIINAYCR----------------IGLYSK--------------- 218
+++++G P +VTY +I A+C+ G+ +K
Sbjct: 793 KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 852
Query: 219 ----AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
A K+ EM + G + A S++V + + G++ +A R+ +K G P+
Sbjct: 853 DLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT---T 909
Query: 275 SLMDM 279
+L+D+
Sbjct: 910 TLIDL 914
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 3/206 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q +++M + I+ D Y +++ K G E+ LF E + R L + T Y
Sbjct: 715 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIV---DTVTY 771
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L K G++ E+ F M KG+ D Y +I + + A +L E
Sbjct: 772 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 831
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KGML + L+ + + + ++++ M L S +V F +
Sbjct: 832 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDE 891
Query: 184 AVKVYEQLISQGCIPGQVTYASIINA 209
A +V+E + S G +P T ++N
Sbjct: 892 ATRVFEGVKSLGLVPDTTTLIDLVNG 917
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 163/349 (46%), Gaps = 24/349 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGD---SEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
M+ AG ++ Y ++ AF + G+ +E+V +L E + K +L + + +
Sbjct: 178 MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLV-----TFNSMVNG 232
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+GR K F +M +G+ D Y +L+ + + + + +F E ++G++ D
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ + G +E+ + +V M+ L +++ +++GF K+ A+ E
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ G P V Y ++IN YC++G A ++ EM+ K VV YS++++ Y K G
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 412
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM----------DMHGRAKNLRQLE------KYT 293
+ A +L KM KG P+ Y+SL+ D +N+ QL YT
Sbjct: 413 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYT 472
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
T+I + + + ++E G + D +++ SK ++ +E
Sbjct: 473 TLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 136/287 (47%), Gaps = 20/287 (6%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + Y IL +L GR E + DM+ G + Y +L+ +F E+ AE +
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 118 FKEAEEKGMLR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGF 175
E+G + +L F +V + G +E +V + M L D +S +++G+
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGL-APDVVSYNTLLSGY 268
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K ++ V+ ++ +G +P VT+ S+I+A C+ G +A + +M+++G
Sbjct: 269 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 328
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK- 291
V +++++ + K G + DA+ V +M+ G +P+V YN+L++ + GR R+L +
Sbjct: 329 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 388
Query: 292 ------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
Y+T+IS Y D + N+ + GV+ A+
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL-NQKMLKKGVLPDAI 434
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 40/304 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G+ D Y ++ + K+G + A+F E R L P + L +
Sbjct: 246 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR--GLVPDVV-TFTSLIHA 302
Query: 70 LGKSGRAFEILKFFRDMKE-------------------KGILED--------------PS 96
K+G + + M+E KG L+D PS
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362
Query: 97 V--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
V Y +LI + + + +A EL +E E K + D+ + ++ Y + G ++ ++ +
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 422
Query: 155 SMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M + + D I+ ++ G + + A +++E ++ G P + TY ++I+ +C+
Sbjct: 423 KMLKKGV-LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKE 481
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G KA + EM +KG VV YS ++ K+ R ++A RL+ K+ + P+ Y
Sbjct: 482 GNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY 541
Query: 274 NSLM 277
++LM
Sbjct: 542 DALM 545
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 118/275 (42%), Gaps = 20/275 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M+ GI CY ++ + K+G + L E E++++ Y +
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK---PDVVTYSTIISGY 408
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G + + M +KG+L D Y+SLI + A ELF+ + G+ D
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
+ L+ + +EG VEK L + + M + + D ++ V++NG SK A ++
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGV-LPDVVTYSVLINGLSKSARTKEAHRLLF 527
Query: 190 QLISQGCIPGQVTY---------------ASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+L + +P + Y +++ +C GL +A+KV+ M + +
Sbjct: 528 KLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLD 587
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
YS ++ + + G +R A+ +M G PN
Sbjct: 588 GSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 137/302 (45%), Gaps = 18/302 (5%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + +M+ G+ ++ + +++ F K G + AL E RK + PS
Sbjct: 308 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD--ALLAVEEMRKCGIQPSVV- 364
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L + K GR + R+M+ K + D Y+++I + + + A +L ++
Sbjct: 365 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+KG+L D + L+ EE + E+ E+M + + +++G K
Sbjct: 425 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 484
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG-------FDKC 234
A+ +++++I +G +P VTY+ +IN + +A ++ ++ + +D
Sbjct: 485 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 544
Query: 235 VVA-----YSSMVAM---YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
++ + S+VA+ + G +++A ++ M + + + +Y+ L+ H R N+
Sbjct: 545 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 604
Query: 287 RQ 288
R+
Sbjct: 605 RK 606
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+A + ++ G P TY ++ A C G +A V +M+ G V Y+++V
Sbjct: 135 SARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLV 194
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG-CEPNVWIYNSLMD-------MHGRAKNLRQLEK--- 291
A + + G + A R+V+ M+ +G +PN+ +NS+++ M G K ++ +
Sbjct: 195 AAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGL 254
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y T++S Y + ++E G V D ++ K +E+
Sbjct: 255 APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 130/270 (48%), Gaps = 3/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ M+ G+ D Y ++ A+ + G E+ L + L Y + +
Sbjct: 276 FLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLK---PCVFTYNAIIN 332
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K+G+ +M + G+ D + Y L+ + AE +F E +G++
Sbjct: 333 GLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVP 392
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
DL F L+ + + G +++ L+ MKNA L + I +++ GF + A+KV
Sbjct: 393 DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVR 452
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++ QGC+ VTY +I+N C+ + S+A+++F EM ++G +++++ Y K
Sbjct: 453 DEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKD 512
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G + A+ L M + +P+V YN+L+D
Sbjct: 513 GNMNKAVTLFEMMIQRNLKPDVVTYNTLID 542
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 151/333 (45%), Gaps = 22/333 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S G+V D + ++ K G ++ F + + L P + +Y IL
Sbjct: 382 FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM--KNAGLAPDNV-IYTILIGG 438
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++G E LK +M E+G + D Y +++ + A+ELF E E+G+ D
Sbjct: 439 FCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD 498
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F L+ Y ++G + K + + E M L +++GF K +++
Sbjct: 499 FYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWN 558
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+IS+ P ++Y +IN YC +G S+A +++ EM +KGF+ ++ +++V Y + G
Sbjct: 559 DMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAG 618
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
A ++ M KG P+ YN+L++ I NM R F +
Sbjct: 619 NAVKADEFLSNMLLKGIVPDGITYNTLIN---------------GFIKEENMDRAFALVN 663
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
K N +G + D +++ FS+ +++E
Sbjct: 664 KMEN----SGLLPDVITYNVILNGFSRQGRMQE 692
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 85/177 (48%)
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
+I + +++ + + EEKG+ D+ + L+ Y +G++E+ E+++SM
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 319
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
L I+NG K Y A V ++++ G P TY ++ CR AE
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 379
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++F EM +G +V++S+++ + K G + A++ MK G P+ IY L+
Sbjct: 380 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 436
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 113/259 (43%), Gaps = 16/259 (6%)
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+P V+ L+ ++ +++ E F+ + KG+ + L+ ++ G V+ E+
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ + + + ++ +++N K + + +G P VTY ++INAYCR
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
GL +A ++ M KG CV Y++++ KTG+ A ++ +M G P+ Y
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 362
Query: 274 NSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRM 317
N L+ R N+ E+ ++ +I + D +K++ + +
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 422
Query: 318 NGGVIDRAMAGIMVGVFSK 336
G D + I++G F +
Sbjct: 423 AGLAPDNVIYTILIGGFCR 441
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 7/232 (3%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + +E M + D Y +++ F K + EKV L+ + SR++ H
Sbjct: 514 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI----YPNH 569
Query: 62 M-YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y IL + G E + + +M EKG +++ + A+E
Sbjct: 570 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 629
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRR 179
KG++ D + L+ +I+E +++ +V M+N+ L + D I+ VI+NGFS++
Sbjct: 630 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL-LPDVITYNVILNGFSRQG 688
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A + ++I +G P + TY S+IN + +A +V EM Q+GF
Sbjct: 689 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 740
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/312 (17%), Positives = 141/312 (45%), Gaps = 3/312 (0%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +KS G+ + ++ K+G + ++ E + + + + I+ ++
Sbjct: 207 FRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQV---NVYTLNIMINA 263
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ + F DM+EKG+ D Y +LI ++ ++ A EL KG+
Sbjct: 264 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 323
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ + G + V++ M ++ +++ + A ++++
Sbjct: 324 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 383
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ SQG +P V+++++I + G +A K F +M+ G V Y+ ++ + + G
Sbjct: 384 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 443
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
+ +A+++ +M +GC +V YN++++ + K L + ++ T ++ + +F
Sbjct: 444 VMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFT 503
Query: 310 KFYNEFRMNGGV 321
N + +G +
Sbjct: 504 TLINGYSKDGNM 515
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 5/279 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH+++K+ + G L+ Y ++ KIGD+ L + + R LT + MY +
Sbjct: 397 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR---LTKPNVEMYSTI 453
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+L K E F +M KGI D Y++LI F + ++K A L E K +
Sbjct: 454 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTI 513
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + LV +EG V++ V+ M A + ++NG+ A
Sbjct: 514 NPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQH 573
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+ + G P TY +IN +C+ + +A +F EM QK V YSS+V
Sbjct: 574 VFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLC 633
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
K+GRI L+ +M+ +G +V YNSL+D G KN
Sbjct: 634 KSGRISYVWDLIDEMRDRGQPADVITYNSLID--GLCKN 670
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 120/283 (42%), Gaps = 41/283 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M GI D Y ++ F +G ++ L E + ++ Y IL D+
Sbjct: 470 FSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTIN---PDVRTYTILVDA 526
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LGK G+ E M + + D Y +L+ + + EVK A+ +F G+ D
Sbjct: 527 LGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPD 586
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + +++NGF K + A+ +++
Sbjct: 587 VHTY-----------------------------------TILINGFCKSKMVDEALNLFK 611
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + +P VTY+S+++ C+ G S + EM+ +G V+ Y+S++ K G
Sbjct: 612 EMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNG 671
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
+ A+ L KMK +G PN + + L+D GR K+ +++
Sbjct: 672 HLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEV 714
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 141/351 (40%), Gaps = 20/351 (5%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H + M G+ D Y ++ F KI +K LF E + P KIL
Sbjct: 259 HVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRF---PPIIQFNKIL- 314
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
DS K + ++ KGI D LI F + ++ + + ++G
Sbjct: 315 DSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYP 374
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
L+ +G V+K L + + ++ ++NG K A+K+
Sbjct: 375 PSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 434
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ + P Y++II+A C+ L S+A +F EM KG VV YS+++ +
Sbjct: 435 LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 494
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
G++++A+ L+ +M K P+V Y L+D G+ +++ +
Sbjct: 495 VGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFT 554
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y T+++ Y + E +N + G D I++ F K ++E
Sbjct: 555 YNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDE 605
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 8/274 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYK 64
LH+++K+ + G L+ Y ++ +IGD+ + A FL RK+D L + MY
Sbjct: 83 LHFHDKLLAQGFQLNQVSYATLINGVCRIGDT-RAAIKFL----RKIDGRLAKPNVEMYN 137
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ D+L K E F +M KGI + Y++LI F + ++K A L K
Sbjct: 138 TIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLK 197
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ ++ + LV +EG V++ V+ M A + + +++G+ A
Sbjct: 198 TINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKA 257
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V+ + G P +Y +IN +C+I KA +F EM F ++ ++ ++
Sbjct: 258 QHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDS 316
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ K A+ L +++ KG +P+++ N L++
Sbjct: 317 FAKMKHYSTAVSLSHRLELKGIQPDLFTLNILIN 350
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 53 LDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVK 112
+ +TP H Y IL + KS E L F++M +K ++ D Y+SL+ +
Sbjct: 581 MGVTPD-VHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRIS 639
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
+L E ++G D+ + L+ + G ++K + + MK+
Sbjct: 640 YVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKD-------------- 685
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
QG P T+ +++ C+ G A++VF ++ KG+
Sbjct: 686 ---------------------QGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 724
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y+ M+ + K G + +A+ +++KM+ GC PN ++ +++
Sbjct: 725 LDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIIN 770
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 16/216 (7%)
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
+G V++ L + + ++ ++NG + AA+K ++ + P
Sbjct: 76 KGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEM 135
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y +II+A C+ L S+A +F EM KG VV YS+++ + G++++A+ L+ M
Sbjct: 136 YNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMV 195
Query: 263 PKGCEPNVWIYNSLMDM---HGRAKNLR-------------QLEKYTTVISAYNMAREFD 306
K PNV YN L+D G+ K + + Y+T++ Y + E
Sbjct: 196 LKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVK 255
Query: 307 MCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+N + G D IM+ F K+ ++++
Sbjct: 256 KAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDK 291
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 11/127 (8%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
++ V +++ +G P VT ++I C G +A ++ +GF V+Y++++
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
+ G R A++ + K+ + +PNV +YN+++D L KY V AY +
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIID---------ALCKYQLVSEAYGLFS 157
Query: 304 EFDMCVK 310
E M VK
Sbjct: 158 E--MTVK 162
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 144/282 (51%), Gaps = 8/282 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKIL 66
Y+++M G++ ++ Y ++ +K G+ + ++F + + D+ S ++ +L
Sbjct: 277 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLL 336
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
K+GR E LK F ++KEKG++ D Y+SLI F EV+ A EL E KG+
Sbjct: 337 -----KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 391
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ ++ LV + G +++ ++ + M L +++G+ K A
Sbjct: 392 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 451
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ ++ S+G P Y ++++ C+ G KA +F EM QKGF +++++++ Y
Sbjct: 452 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYC 510
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
K+ +I++A +L +M K P+ Y +++D H +A + +
Sbjct: 511 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 552
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 121/266 (45%), Gaps = 20/266 (7%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L GR E + M G+ D Y ++I + +++ A E
Sbjct: 187 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 246
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ +G+ D F +L Y + G + + + + M + L ++ + V++NG K
Sbjct: 247 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 306
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+ ++ L + G +P T ++ I+ + G +A KVF E+++KG V YSS+
Sbjct: 307 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 366
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------- 291
++ + K G + A L +M KG PN++IYN+L+D ++ ++++ K
Sbjct: 367 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 426
Query: 292 ------YTTVISAY----NMAREFDM 307
Y+T+I Y N+A F +
Sbjct: 427 EPDSVTYSTMIDGYCKSENVAEAFSL 452
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 123/284 (43%), Gaps = 24/284 (8%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHM 62
Q L + ++K G+V D Y ++ F K G+ EK L E C L + +
Sbjct: 342 QEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMC----LKGIAPNIFI 397
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L KSG K F M EKG+ D Y+++I + V A LF E
Sbjct: 398 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 457
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ V+ LV +EG +EK + + M + + +++G+ K
Sbjct: 458 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN-TLIDGYCKSCKIQ 516
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++++I++ +P VTY ++I+ +C+ G +A +F EMQ++
Sbjct: 517 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL----------- 565
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ L KM KG +P+ Y ++ H + NL
Sbjct: 566 -------IVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL 602
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 112/238 (47%), Gaps = 1/238 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L P+ T+ Y I+ L ++ R E F +M++ G+ D + ++LI F ++
Sbjct: 6 LVPN-TYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+ G+ +L + L+ + G +EK E+++ M + C+++ G
Sbjct: 65 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+ + A+++ +++ + +P V+Y ++IN C S A K+ +M G
Sbjct: 125 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 184
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
VV YS+++ Y GRI +A RL+ M G P+++ YN+++ +A + + Y
Sbjct: 185 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 242
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 120/273 (43%), Gaps = 16/273 (5%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M EKG++ + Y + + A+ F+E ++ G+ D L+ ++ EG
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+++ L + + M + + I+ V+++G K A ++ + +I+ GC P T+
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+I YCR +A ++ EM+++ V+Y +M+ + A +L+ KM G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Query: 266 CEPNVWIYNSLM---DMHGRAKNLRQLEK-------------YTTVISAYNMAREFDMCV 309
+PNV +Y++L+ GR + R+L Y +IS + A + +
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ E + G D G + +SK ++ E
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 273
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/315 (19%), Positives = 129/315 (40%), Gaps = 9/315 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSE---KVAALFLECESRKLDLTPSSTHMYKIL 66
+E+M+ G+ D +++ F + GD + ++ + + C P + Y +L
Sbjct: 33 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCG------IPINLITYNVL 86
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L K G+ + + + M G + + LI + + A EL E E++ +
Sbjct: 87 IHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNL 146
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + ++ + +++E M + L + + ++ G++ A +
Sbjct: 147 VPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARR 206
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + + G P Y +II+ + G +A +E+Q +G V + + + Y
Sbjct: 207 LLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYS 266
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
KTG++ +A + +M G PN +Y L++ H +A NL + + A + +
Sbjct: 267 KTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQ 326
Query: 307 MCVKFYNEFRMNGGV 321
C F + NG V
Sbjct: 327 TCSAFIHGLLKNGRV 341
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 116/297 (39%), Gaps = 63/297 (21%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + +M S G+ S Y ++ K GD EK LF E + ++T
Sbjct: 445 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF----ATTL 500
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ L D KS + E + F++M K I+ D Y ++I +++ A LFKE
Sbjct: 501 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 560
Query: 122 E-----------------EKGMLRDLEVFLKLVLMYI--EEGMVEKTLEVVESMKNAELN 162
+ KG+ D EV LV+ E+ +VE
Sbjct: 561 QERNLIVDTVFALFEKMVAKGVKPD-EVTYGLVIYAHCKEDNLVE--------------- 604
Query: 163 ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
A K+ ++++ +G + + +I A C+ ++A K+
Sbjct: 605 ---------------------AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 643
Query: 223 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
EM + G + A S++V + + G++ +A R+ +K G P+ +L+D+
Sbjct: 644 LDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT---TTLIDL 697
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 130/270 (48%), Gaps = 3/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ M+ G+ D Y ++ A+ + G E+ L + L Y + +
Sbjct: 119 FLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGL---KPCVFTYNAIIN 175
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K+G+ +M + G+ D + Y L+ + AE +F E +G++
Sbjct: 176 GLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVP 235
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
DL F L+ + + G +++ L+ MKNA L + I +++ GF + A+KV
Sbjct: 236 DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVR 295
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++ QGC+ VTY +I+N C+ + S+A+++F EM ++G +++++ Y K
Sbjct: 296 DEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKD 355
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G + A+ L M + +P+V YN+L+D
Sbjct: 356 GNMNKAVTLFEMMIQRNLKPDVVTYNTLID 385
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 151/333 (45%), Gaps = 22/333 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S G+V D + ++ K G ++ F + + L P + +Y IL
Sbjct: 225 FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD--MKNAGLAPDNV-IYTILIGG 281
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++G E LK +M E+G + D Y +++ + A+ELF E E+G+ D
Sbjct: 282 FCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD 341
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F L+ Y ++G + K + + E M L +++GF K +++
Sbjct: 342 FYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWN 401
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+IS+ P ++Y +IN YC +G S+A +++ EM +KGF+ ++ +++V Y + G
Sbjct: 402 DMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAG 461
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
A ++ M KG P+ YN+L++ I NM R F +
Sbjct: 462 NAVKADEFLSNMLLKGIVPDGITYNTLIN---------------GFIKEENMDRAFALVN 506
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
K N +G + D +++ FS+ +++E
Sbjct: 507 KMEN----SGLLPDVITYNVILNGFSRQGRMQE 535
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 147/336 (43%), Gaps = 25/336 (7%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMY 63
L Y+ MK+AG+ D+ Y ++ F + G ++ KV LE + LD+ Y
Sbjct: 257 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE-QGCVLDVVT-----Y 310
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ + L K E + F +M E+G+ D + +LI ++ + A LF+ +
Sbjct: 311 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 370
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + D+ + L+ + + +EK E+ M + + + +++NG+
Sbjct: 371 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 430
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +++++++ +G +T +I+ YCR G KA++ M KG + Y++++
Sbjct: 431 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 490
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------- 290
+ K + A LV KM+ G P+V YN +++ R +++ E
Sbjct: 491 GFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP 550
Query: 291 ---KYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
YT++I+ + + ++E G V D
Sbjct: 551 DRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 3/202 (1%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
A+EI ++++ G+ + +I + +++ + + EEKG+ D+ +
Sbjct: 81 AWEI---YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 137
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
L+ Y +G++E+ E+++SM L I+NG K Y A V ++++ G
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 197
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
P TY ++ CR AE++F EM +G +V++S+++ + K G + A+
Sbjct: 198 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 257
Query: 256 RLVAKMKPKGCEPNVWIYNSLM 277
+ MK G P+ IY L+
Sbjct: 258 KYFRDMKNAGLAPDNVIYTILI 279
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 113/259 (43%), Gaps = 16/259 (6%)
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+P V+ L+ ++ +++ E F+ + KG+ + L+ ++ G V+ E+
Sbjct: 26 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ + + + ++ +++N K + + +G P VTY ++INAYCR
Sbjct: 86 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
GL +A ++ M KG CV Y++++ KTG+ A ++ +M G P+ Y
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205
Query: 274 NSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRM 317
N L+ R N+ E+ ++ +I + D +K++ + +
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265
Query: 318 NGGVIDRAMAGIMVGVFSK 336
G D + I++G F +
Sbjct: 266 AGLAPDNVIYTILIGGFCR 284
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/312 (17%), Positives = 141/312 (45%), Gaps = 3/312 (0%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +KS G+ + ++ K+G + ++ E + + + + I+ ++
Sbjct: 50 FRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQV---NVYTLNIMINA 106
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ + F DM+EKG+ D Y +LI ++ ++ A EL KG+
Sbjct: 107 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 166
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ + G + V++ M ++ +++ + A ++++
Sbjct: 167 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 226
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ SQG +P V+++++I + G +A K F +M+ G V Y+ ++ + + G
Sbjct: 227 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 286
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
+ +A+++ +M +GC +V YN++++ + K L + ++ T ++ + +F
Sbjct: 287 VMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFT 346
Query: 310 KFYNEFRMNGGV 321
N + +G +
Sbjct: 347 TLINGYSKDGNM 358
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 7/232 (3%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + +E M + D Y +++ F K + EKV L+ + SR++ H
Sbjct: 357 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI----YPNH 412
Query: 62 M-YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y IL + G E + + +M EKG +++ + A+E
Sbjct: 413 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 472
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRR 179
KG++ D + L+ +I+E +++ +V M+N+ L + D I+ VI+NGFS++
Sbjct: 473 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL-LPDVITYNVILNGFSRQG 531
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A + ++I +G P + TY S+IN + +A +V EM Q+GF
Sbjct: 532 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 583
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 163/349 (46%), Gaps = 24/349 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGD---SEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
M+ AG ++ Y ++ AF + G+ +E+V +L E + K +L + + +
Sbjct: 36 MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLV-----TFNSMVNG 90
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+GR K F +M +G+ D Y +L+ + + + + +F E ++G++ D
Sbjct: 91 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 150
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ + G +E+ + +V M+ L +++ +++GF K+ A+ E
Sbjct: 151 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 210
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ G P V Y ++IN YC++G A ++ EM+ K VV YS++++ Y K G
Sbjct: 211 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 270
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM----------DMHGRAKNLRQLE------KYT 293
+ A +L KM KG P+ Y+SL+ D +N+ QL YT
Sbjct: 271 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYT 330
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
T+I + + + ++E G + D +++ SK ++ +E
Sbjct: 331 TLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 379
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 136/288 (47%), Gaps = 20/288 (6%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + Y IL +L GR E + DM+ G + Y +L+ +F E+ AE +
Sbjct: 8 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67
Query: 118 FKEAEEKGMLR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGF 175
E+G + +L F +V + G +E +V + M L D +S +++G+
Sbjct: 68 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGL-APDVVSYNTLLSGY 126
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K ++ V+ ++ +G +P VT+ S+I+A C+ G +A + +M+++G
Sbjct: 127 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 186
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK- 291
V +++++ + K G + DA+ V +M+ G +P+V YN+L++ + GR R+L +
Sbjct: 187 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 246
Query: 292 ------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
Y+T+IS Y D + N+ + GV+ A+
Sbjct: 247 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL-NQKMLKKGVLPDAIT 293
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 40/304 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G+ D Y ++ + K+G + A+F E R L P + L +
Sbjct: 104 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR--GLVPDVV-TFTSLIHA 160
Query: 70 LGKSGRAFEILKFFRDMKE-------------------KGILED--------------PS 96
K+G + + M+E KG L+D PS
Sbjct: 161 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 220
Query: 97 V--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
V Y +LI + + + +A EL +E E K + D+ + ++ Y + G ++ ++ +
Sbjct: 221 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 280
Query: 155 SMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M + + D I+ ++ G + + A +++E ++ G P + TY ++I+ +C+
Sbjct: 281 KMLKKGV-LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKE 339
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G KA + EM +KG VV YS ++ K+ R ++A RL+ K+ + P+ Y
Sbjct: 340 GNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY 399
Query: 274 NSLM 277
++LM
Sbjct: 400 DALM 403
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 118/275 (42%), Gaps = 20/275 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M+ GI CY ++ + K+G + L E E++++ Y +
Sbjct: 210 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK---PDVVTYSTIISGY 266
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G + + M +KG+L D Y+SLI + A ELF+ + G+ D
Sbjct: 267 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 326
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
+ L+ + +EG VEK L + + M + + D ++ V++NG SK A ++
Sbjct: 327 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGV-LPDVVTYSVLINGLSKSARTKEAHRLLF 385
Query: 190 QLISQGCIPGQVTY---------------ASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+L + +P + Y +++ +C GL +A+KV+ M + +
Sbjct: 386 KLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLD 445
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
YS ++ + + G +R A+ +M G PN
Sbjct: 446 GSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 480
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 137/302 (45%), Gaps = 18/302 (5%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + +M+ G+ ++ + +++ F K G + AL E RK + PS
Sbjct: 166 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD--ALLAVEEMRKCGIQPSVV- 222
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L + K GR + R+M+ K + D Y+++I + + + A +L ++
Sbjct: 223 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 282
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+KG+L D + L+ EE + E+ E+M + + +++G K
Sbjct: 283 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 342
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG-------FDKC 234
A+ +++++I +G +P VTY+ +IN + +A ++ ++ + +D
Sbjct: 343 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 402
Query: 235 VVA-----YSSMVAM---YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
++ + S+VA+ + G +++A ++ M + + + +Y+ L+ H R N+
Sbjct: 403 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 462
Query: 287 RQ 288
R+
Sbjct: 463 RK 464
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 17/169 (10%)
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G P TY ++ A C G +A V +M+ G V Y+++VA + + G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 251 IRDAMRLVAKMKPKG-CEPNVWIYNSLMD-------MHGRAKNLRQLEK---------YT 293
+ A R+V+ M+ +G +PN+ +NS+++ M G K ++ + Y
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
T++S Y + ++E G V D ++ K +E+
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 169
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 163/349 (46%), Gaps = 24/349 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGD---SEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
M+ AG ++ Y ++ AF + G+ +E+V +L E + K +L + + +
Sbjct: 178 MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLV-----TFNSMVNG 232
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+GR K F +M +G+ D Y +L+ + + + + +F E ++G++ D
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ + G +E+ + +V M+ L +++ +++GF K+ A+ E
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ G P V Y ++IN YC++G A ++ EM+ K VV YS++++ Y K G
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 412
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM----------DMHGRAKNLRQLE------KYT 293
+ A +L KM KG P+ Y+SL+ D +N+ QL YT
Sbjct: 413 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYT 472
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
T+I + + + ++E G + D +++ SK ++ +E
Sbjct: 473 TLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 136/288 (47%), Gaps = 20/288 (6%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + Y IL +L GR E + DM+ G + Y +L+ +F E+ AE +
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 118 FKEAEEKGMLR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGF 175
E+G + +L F +V + G +E +V + M L D +S +++G+
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGL-APDVVSYNTLLSGY 268
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K ++ V+ ++ +G +P VT+ S+I+A C+ G +A + +M+++G
Sbjct: 269 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 328
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK- 291
V +++++ + K G + DA+ V +M+ G +P+V YN+L++ + GR R+L +
Sbjct: 329 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 388
Query: 292 ------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
Y+T+IS Y D + N+ + GV+ A+
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQL-NQKMLKKGVLPDAIT 435
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 40/304 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G+ D Y ++ + K+G + A+F E R L P + L +
Sbjct: 246 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR--GLVPDVV-TFTSLIHA 302
Query: 70 LGKSGRAFEILKFFRDMKE-------------------KGILED--------------PS 96
K+G + + M+E KG L+D PS
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362
Query: 97 V--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
V Y +LI + + + +A EL +E E K + D+ + ++ Y + G ++ ++ +
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 422
Query: 155 SMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M + + D I+ ++ G + + A +++E ++ G P + TY ++I+ +C+
Sbjct: 423 KMLKKGV-LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKE 481
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G KA + EM +KG VV YS ++ K+ R ++A RL+ K+ + P+ Y
Sbjct: 482 GNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY 541
Query: 274 NSLM 277
++LM
Sbjct: 542 DALM 545
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 118/275 (42%), Gaps = 20/275 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M+ GI CY ++ + K+G + L E E++++ Y +
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK---PDVVTYSTIISGY 408
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G + + M +KG+L D Y+SLI + A ELF+ + G+ D
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
+ L+ + +EG VEK L + + M + + D ++ V++NG SK A ++
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGV-LPDVVTYSVLINGLSKSARTKEAHRLLF 527
Query: 190 QLISQGCIPGQVTY---------------ASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+L + +P + Y +++ +C GL +A+KV+ M + +
Sbjct: 528 KLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLD 587
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
YS ++ + + G +R A+ +M G PN
Sbjct: 588 GSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 134/292 (45%), Gaps = 18/292 (6%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ G+ ++ + +++ F K G + AL E RK + PS Y L +
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDD--ALLAVEEMRKCGIQPSVV-CYNALINGYC 374
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K GR + R+M+ K + D Y+++I + + + A +L ++ +KG+L D
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ EE + E+ E+M + + +++G K A+ +++++
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG-------FDKCVVA-----YS 239
I +G +P VTY+ +IN + +A ++ ++ + +D ++ +
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 554
Query: 240 SMVAM---YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
S+VA+ + G +++A ++ M + + + +Y+ L+ H R N+R+
Sbjct: 555 SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRK 606
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+A + ++ G P TY ++ A C G +A V +M+ G V Y+++V
Sbjct: 135 SARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLV 194
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG-CEPNVWIYNSLMD-------MHGRAKNLRQLEK--- 291
A + + G + A R+V+ M+ +G +PN+ +NS+++ M G K ++ +
Sbjct: 195 AAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGL 254
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y T++S Y + ++E G V D ++ K +E+
Sbjct: 255 APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 152/367 (41%), Gaps = 55/367 (14%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ LH+++K+ + G ++ Y ++ KIG++ L E R T MY
Sbjct: 219 KKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRS---TRPDVVMY 275
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ D L K E F+ +M +GI D Y++LIC F ++ A L E
Sbjct: 276 NTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTL 335
Query: 124 KGMLRDLEVFLKLVLMYIEEGM-----------------------------------VEK 148
K + D+ + L+ +EG V
Sbjct: 336 KNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHN 395
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
++ +M E+N S C +++NG K ++ A+ + +++ + +P VTY S+I+
Sbjct: 396 AKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLID 455
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
C+ G + A + E+ +G V+ Y+S++ K + A+ L KMK +G +P
Sbjct: 456 GLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQP 515
Query: 269 NVWIYNSLMD---MHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV---- 321
N + Y +L+D R KN ++L ++ V C+ Y M GG+
Sbjct: 516 NKYTYTALIDGLCKGARLKNAQKLFQHILVKGC---------CIDVYTYNVMIGGLCKEG 566
Query: 322 -IDRAMA 327
+D A+A
Sbjct: 567 MLDEALA 573
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 126/301 (41%), Gaps = 40/301 (13%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+Y +M S GI D Y ++ F G +L E + ++ + Y IL D
Sbjct: 294 FYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNIN---PDVYTYTILID 350
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF---------- 118
+L K G+ E M ++G+ + Y++L+ + + EV A+++F
Sbjct: 351 ALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNP 410
Query: 119 -------------------------KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+E K ++ + + L+ + G + L+++
Sbjct: 411 SVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLM 470
Query: 154 ESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ + + +D I+ +++G K + A+ ++ ++ +G P + TY ++I+ C+
Sbjct: 471 KELHHRG-QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 529
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
A+K+F + KG V Y+ M+ K G + +A+ + +KM+ GC P+
Sbjct: 530 GARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVT 589
Query: 273 Y 273
+
Sbjct: 590 F 590
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 1/242 (0%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TPS KIL SL K + + M+ KGI D + LI F + ++ +
Sbjct: 129 TPSIIEFGKIL-GSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSF 187
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ + + G + + L+ +G V+K+L + + ++ ++NG
Sbjct: 188 SVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGL 247
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A+K+ + + P V Y +II+ C+ L ++A + EM +G V
Sbjct: 248 CKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDV 307
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
+ YS+++ + G++ A L+ +M K P+V+ Y L+D + L++ + V
Sbjct: 308 ITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGV 367
Query: 296 IS 297
++
Sbjct: 368 MT 369
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 104/253 (41%), Gaps = 3/253 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G+ + Y +M+ + +G+ +F +++ + S Y I+ + L K
Sbjct: 368 MTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCS---YNIMINGLCK 424
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
E + R+M K ++ + Y SLI + A +L KE +G D+
Sbjct: 425 GKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVIT 484
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + ++K + + MK + + +++G K A K+++ ++
Sbjct: 485 YTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHIL 544
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+GC TY +I C+ G+ +A + +M+ G V + ++ +
Sbjct: 545 VKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDEND 604
Query: 253 DAMRLVAKMKPKG 265
A +L+ +M KG
Sbjct: 605 KAEKLLHEMIAKG 617
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 18/257 (7%)
Query: 52 KLDLTPSS---THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
KL P++ T + K LC G + L F + +G + Y +L+ I
Sbjct: 195 KLGYQPNTIILTTLMKGLC----LKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKI 250
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
E + A +L + E++ D+ ++ ++ ++ +V + + M N+ D I+
Sbjct: 251 GETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEM-NSRGIFPDVIT 309
Query: 169 -CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
++ GF A + ++ + P TY +I+A C+ G +A+ + M
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
++G VV YS+++ Y G + +A ++ M P+V YN +++
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMIN--------- 420
Query: 288 QLEKYTTVISAYNMARE 304
L K +V A N+ RE
Sbjct: 421 GLCKGKSVDEAMNLLRE 437
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 144/282 (51%), Gaps = 8/282 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKIL 66
Y+++M G++ ++ Y ++ +K G+ + ++F + + D+ S ++ +L
Sbjct: 565 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLL 624
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
K+GR E LK F ++KEKG++ D Y+SLI F EV+ A EL E KG+
Sbjct: 625 -----KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 679
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ ++ LV + G +++ ++ + M L +++G+ K A
Sbjct: 680 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 739
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ ++ S+G P Y ++++ C+ G KA +F EM QKGF +++++++ Y
Sbjct: 740 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYC 798
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
K+ +I++A +L +M K P+ Y +++D H +A + +
Sbjct: 799 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 840
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 124/266 (46%), Gaps = 20/266 (7%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL + GR E + M G+ D Y ++I + +++ A E
Sbjct: 475 VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 534
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ +G+ D F +L Y + G + + + + M + L ++ + V++NG K
Sbjct: 535 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 594
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+ ++ +L + G +P T ++ I+ + G +A KVF E+++KG V YSS+
Sbjct: 595 MEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 654
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------- 291
++ + K G + A L +M KG PN++IYN+L+D ++ ++++ K
Sbjct: 655 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 714
Query: 292 ------YTTVISAY----NMAREFDM 307
Y+T+I Y N+A F +
Sbjct: 715 EPDSVTYSTMIDGYCKSENVAEAFSL 740
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 132/318 (41%), Gaps = 38/318 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y M A + D Y ++ A K GD + +E + + L+ + +Y ++ +
Sbjct: 216 YNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLN---PNEFIYSLVIEG 272
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ + G E ++ R M EKG++ + Y + + A+ F+E ++ G+ D
Sbjct: 273 MCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPD 332
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+ ++ EG +++ L + + M + + I+ V+++G K A ++ +
Sbjct: 333 YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK 392
Query: 190 QLISQGC-----------------------------------IPGQVTYASIINAYCRIG 214
+++ GC +P V+Y ++IN C
Sbjct: 393 GMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 452
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
S A K+ +M G VV YS ++ Y GRI +A RL+ M G P+++ YN
Sbjct: 453 DLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYN 512
Query: 275 SLMDMHGRAKNLRQLEKY 292
+++ +A + + Y
Sbjct: 513 AIISCLSKAGKMEEASTY 530
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 127/268 (47%), Gaps = 4/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M G+ DS Y +++ + K + + +LF E S+ + P S +Y L
Sbjct: 706 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ--PHS-FVYNALVHG 762
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G + + FR+M +KG S + +LI + +++ A +LF+E K ++ D
Sbjct: 763 CCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 821
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + + G +E+ + + M+ L + ++ G++K ++E
Sbjct: 822 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFE 881
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++++G P +VTY +I A+C+ +A K+ E+ KG + ++ K
Sbjct: 882 KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 941
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ +A +L+ +M G +P++ N+L+
Sbjct: 942 DLTEASKLLDEMGELGLKPSLAACNTLV 969
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 139/358 (38%), Gaps = 42/358 (11%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHM 62
Q L + ++K G+V D Y ++ F K G+ EK L E C L + +
Sbjct: 630 QEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMC----LKGIAPNIFI 685
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L KSG K F M EKG+ D Y+++I + V A LF E
Sbjct: 686 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 745
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ V+ LV +EG +EK + + M + + +++G+ K
Sbjct: 746 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN-TLIDGYCKSCKIQ 804
Query: 183 AAVKVYEQLISQGCIPGQVTYA-----------------------------------SII 207
A ++++++I++ +P VTY S++
Sbjct: 805 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
Y ++G S+ +F +M KG V Y ++ + K + +A +L ++ KG
Sbjct: 865 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 924
Query: 268 PNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
I++ L+ + ++L + K + + C F G +D A
Sbjct: 925 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFH-EAGKMDEA 981
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 127/312 (40%), Gaps = 44/312 (14%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M S GI ++ Y ++ K G EK A + + L P+S + +L + +
Sbjct: 359 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT--LGCKPNS-RTFCLLIEGYCR 415
Query: 73 S---GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GRA E+L +M+++ ++ Y ++I ++ +A +L ++ G+ +
Sbjct: 416 EHNMGRALELLD---EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 472
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ V+ L++ Y EG +E+ +++ M SC
Sbjct: 473 VVVYSILIMAYASEGRIEEARRLLDGM-----------SC-------------------- 501
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
G P Y +II+ + G +A +E+Q +G V + + + Y KTG
Sbjct: 502 ----SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTG 557
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
++ +A + +M G PN +Y L++ H +A NL + + A + + C
Sbjct: 558 KMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCS 617
Query: 310 KFYNEFRMNGGV 321
F + NG V
Sbjct: 618 AFIHGLLKNGRV 629
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 19/204 (9%)
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS---------DCISCVIVNGFSKRRAYW 182
VF L+ Y GM+++ V KN + IS D + C ++ +W
Sbjct: 160 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMM------ELFW 213
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
KVY ++ TY ++ A C+ G A++V IEM +KG + YS ++
Sbjct: 214 ---KVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVI 270
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+ G I +A+ L M KG PN + Y + RAK + + + + +
Sbjct: 271 EGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLK 330
Query: 303 REFDMCVKFYNEFRMNGGVIDRAM 326
+++ C + F M G ID +
Sbjct: 331 PDYNACSALIDGF-MREGDIDEVL 353
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 3/206 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q +++M + I+ D Y +++ K G E+ LF E + R L + T Y
Sbjct: 804 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIV---DTVTY 860
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L K G++ E+ F M KG+ D Y +I + + A +L E
Sbjct: 861 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 920
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KGML + L+ + + + ++++ M L S +V F +
Sbjct: 921 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDE 980
Query: 184 AVKVYEQLISQGCIPGQVTYASIINA 209
A +V+E + S G +P T ++N
Sbjct: 981 ATRVFEGVKSLGLVPDTTTLIDLVNG 1006
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 105/245 (42%), Gaps = 11/245 (4%)
Query: 65 ILCDSLGKS----GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
I C+SL K G K + M + + D Y L+ + +++ A+ + E
Sbjct: 194 IRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIE 253
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+EKG+ + ++ ++ + G +++ +E+ SM L + +I G + +
Sbjct: 254 MDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKR 313
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +E++ G P +++I+ + R G + ++ M G ++ Y+
Sbjct: 314 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 373
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLEKYT 293
++ K G++ A ++ M GC+PN + L++ + R N L ++EK
Sbjct: 374 LIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 433
Query: 294 TVISA 298
V SA
Sbjct: 434 LVPSA 438
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 119/312 (38%), Gaps = 75/312 (24%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-------------- 47
N + +M S G+ S Y ++ K GD EK LF E
Sbjct: 733 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNT 792
Query: 48 -----CESRKLD-------------LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEK 89
C+S K+ + P Y + D K+G+ E F++M+E+
Sbjct: 793 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHV-TYTTVIDWHCKAGKMEEANLLFKEMQER 851
Query: 90 GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI--EEGMVE 147
++ D Y SL+ + + + LF++ KG+ D EV LV+ E+ +VE
Sbjct: 852 NLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPD-EVTYGLVIYAHCKEDNLVE 910
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
A K+ ++++ +G + + +I
Sbjct: 911 ------------------------------------AFKLRDEVVGKGMLTKGTIHDLLI 934
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
A C+ ++A K+ EM + G + A +++V + + G++ +A R+ +K G
Sbjct: 935 TALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLV 994
Query: 268 PNVWIYNSLMDM 279
P+ +L+D+
Sbjct: 995 PDT---TTLIDL 1003
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 89/202 (44%)
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
P V+ LI S+ + + A +F A+ +L L L+ ++ GM+E +V
Sbjct: 158 PVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYN 217
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M +A++ +V K A +V ++ +G P + Y+ +I C++G
Sbjct: 218 GMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVG 277
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A ++ M +KG Y+ + A + R+ +A +M+ G +P+ +
Sbjct: 278 DIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACS 337
Query: 275 SLMDMHGRAKNLRQLEKYTTVI 296
+L+D R ++ ++ + V+
Sbjct: 338 ALIDGFMREGDIDEVLRIKDVM 359
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 136/284 (47%), Gaps = 21/284 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G + D+ Y +++ + ++ K+ FL E K + + Y I+ DS
Sbjct: 473 EMIGQGFIPDTSTYSKVLNY---LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G + K+F +M+E G + Y +LI ++ +V A ELF+ +G L ++
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC-----------------ISCVIVNG 174
+ L+ + + G VEK ++ E M ++ ++ D +++G
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSK-DVPDVDMYFKQYDDNSERPNVVTYGALLDG 648
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K A K+ + + +GC P Q+ Y ++I+ C++G +A++V EM + GF
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ YSS++ Y K R A ++++KM C PNV IY ++D
Sbjct: 709 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 752
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 135/252 (53%), Gaps = 20/252 (7%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ LC S GK +AF ++ R+M +G + D S Y+ ++ + +++++A LF+E +
Sbjct: 456 RCLC-SAGKYEKAFSVI---REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G++ D+ + +V + + G++E+ + M+ + +++ + K +
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF-----------IEMQQKGFD 232
A +++E ++S+GC+P VTY+++I+ +C+ G KA ++F ++M K +D
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 233 -----KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
VV Y +++ + K+ R+ +A +L+ M +GCEPN +Y++L+D + L
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 288 QLEKYTTVISAY 299
+ ++ T +S +
Sbjct: 692 EAQEVKTEMSEH 703
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 111/282 (39%), Gaps = 48/282 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKL------------DLT 56
+E M S G + + Y +++ K G EK +F C S+ + +
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
+ Y L D KS R E K M +G + VY +LI + ++ A+E
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ E E G L + L+ Y + +K +L
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFK-------------VKRQDL--------------- 727
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
A KV +++ C P V Y +I+ C++G +A K+ M++KG VV
Sbjct: 728 -------ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y++M+ +G G+I + L+ +M KG PN Y L+D
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/344 (18%), Positives = 147/344 (42%), Gaps = 35/344 (10%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G +LD C +E K+ D+ + CE ++ +Y L D L K G+
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEG----CEPNQI--------VYDALIDGLCKVGKL 690
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
E + +M E G Y+SLI + + +A ++ + E ++ ++ ++
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ + G ++ ++++ M+ + +++GF +++ E++ S+G
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P VTY +I+ C+ G A + EM+Q + Y ++ + K +++
Sbjct: 811 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLG 868
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAKN----LRQLEK--------------YTTVISA 298
L+ ++ P + +Y L+D +A+ LR LE+ Y ++I +
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 928
Query: 299 YNMAREFDMCVKFYNEFRMNGGVID-RAMAGIMVGVF--SKLSQ 339
+A + + + ++E G + + ++ ++ G+F SK+S+
Sbjct: 929 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 60/314 (19%), Positives = 117/314 (37%), Gaps = 40/314 (12%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T Y L L ++ E + F M+ L + Y++L+C + ++ + +
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEG-------MVEKTLEVVESMKNAELNI--------S 164
+G ++F LV Y G +++K ++ NI
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421
Query: 165 DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI 224
D ++C +++ A K Y ++++ G + ++ +S C G Y KA V
Sbjct: 422 DSLNCDLLD---------LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
EM +GF YS ++ ++ A L +MK G +V+ Y ++D +A
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 285 NLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAG 328
+ Q K YT +I AY A++ + + G + +
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 329 IMVGVFSKLSQIEE 342
++ K Q+E+
Sbjct: 593 ALIDGHCKAGQVEK 606
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+MK + Y +++E F K E + +L L E + D P + +Y++L D+L
Sbjct: 838 EEMKQTHWPTHTAGYRKVIEGFNK----EFIESLGLLDEIGQDDTAPFLS-VYRLLIDNL 892
Query: 71 GKSGRAFEILKFFRDMK--EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K+ R L+ ++ +++ S Y SLI S +V+ A +LF E +KG++
Sbjct: 893 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIP 952
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
+++ F L+ + + L +++ + + E+
Sbjct: 953 EMQSFCSLIKGLFRNSKISEALLLLDFISHMEI 985
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 138/277 (49%), Gaps = 3/277 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + ++ +G+ + + ++ A G + + A+F E R L P T Y L
Sbjct: 290 LEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEM--RDNGLKPR-TRAYNAL 346
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
K+G + +M+ G+ + Y+ LI ++ + + A + KE E +
Sbjct: 347 LRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNV 406
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ VF +++ Y ++G +K+ +V+ M+N+ + V+++ F K A+
Sbjct: 407 QPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMA 466
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++S+G P VT+ ++I+ +CR G + +AE++F EM + G+ C ++ M+ +G
Sbjct: 467 TFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFG 526
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
R D L+A M+ +G PN Y +L+D++G++
Sbjct: 527 DQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKS 563
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 149/350 (42%), Gaps = 23/350 (6%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD--S 69
+M+ +G+ + Y +++A+ G E + E E+ ++ P++ +IL
Sbjct: 365 EMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEAS--NVQPNAYVFSRILSSYRD 422
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ ++F++L R+M+ G+ D Y +I +F + A F +G+ D
Sbjct: 423 KGEWQKSFQVL---REMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPD 479
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G ++ E+ E M + + +++N F + + +
Sbjct: 480 TVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLA 539
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ SQG +P VTY ++I+ Y + G ++ A + +M+ G Y++++ Y + G
Sbjct: 540 HMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRG 599
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG---------------RAKNLR-QLEKYT 293
A+ M+ G +P++ NSL++ G + +L+ + YT
Sbjct: 600 LSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYT 659
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
T++ A +FD Y E ++G DR ++ + Q EL
Sbjct: 660 TLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLRSALKYMKQTLEL 709
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 127/279 (45%), Gaps = 5/279 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIG--DSEKVAALFLECESRKLDLTPSSTHMYK 64
L+ +M+ G D Y I+ + + DS + L+ E E KL+L +
Sbjct: 218 LNLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLEL---DVQLSN 274
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ K+G + L+F ++ G+ + ++I + + AE +F+E +
Sbjct: 275 DIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDN 334
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ + L+ Y++ G+++ VV M+ + ++ ++ +++ + + +A
Sbjct: 335 GLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESA 394
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V +++ + P ++ I+++Y G + K+ +V EM+ G V Y+ M+
Sbjct: 395 RIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDT 454
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+GK + AM +M +G EP+ +N+L+D H RA
Sbjct: 455 FGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRA 493
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D+ G+ + + ++ E + YA L+ ++ + ++ AE +F E
Sbjct: 101 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 160
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G V+ + ++ G +K +E+ E MK S +++N + K +
Sbjct: 161 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSY 220
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+KV+ ++ SQ C P T+ +++NA+ R GL KAE++F ++Q+ G + V AY++++
Sbjct: 221 MALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALM 280
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-------------KNL--- 286
Y + G A + + M+ GCEP+ YN ++D +GRA K L
Sbjct: 281 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGIT 340
Query: 287 RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
++ + ++SAY+ A + C + N+ +G D + M+ ++ +L Q E++
Sbjct: 341 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKM 397
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 141/301 (46%), Gaps = 12/301 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y ++ A V Y +++A+ G EK A+F E RK PS+ +Y D
Sbjct: 121 YLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVF--AEMRKYGFPPSAV-VYNAYIDG 177
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G + ++ F MK + Y LI + ++ +A ++F E + +
Sbjct: 178 LMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPN 237
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F LV + EG+ EK E+ E ++ A L ++ +S+ + A +++
Sbjct: 238 ICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFS 297
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ GC P + +Y +++AY R GL+ A+ VF M++ G + ++ +++ Y + G
Sbjct: 298 LMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAG 357
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------YTTVISAYN 300
++ +V +M G +P+ ++ NS+++++GR ++E+ Y IS YN
Sbjct: 358 KVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYN 417
Query: 301 M 301
+
Sbjct: 418 I 418
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 152/322 (47%), Gaps = 21/322 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ G + Y ++ K GD++K +F E K D ST Y +L +
Sbjct: 156 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIF---ERMKRDRCQPSTATYTMLINL 212
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK+ +++ LK F +M+ + + + +L+ +FA + AEE+F++ +E G+ D
Sbjct: 213 YGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 272
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y G E+ M++ ++V+ + + + A V+E
Sbjct: 273 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 332
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G P ++ +++AY R G +K E++ +M + G +SM+ +YG+ G
Sbjct: 333 VMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLG 392
Query: 250 RIRDAMRLVAKMKPKGCEP-NVWIYNSLMDMHGRAKNLRQLEK----------------Y 292
+ ++ M+ KG P ++ YN L++++GRA ++E+ +
Sbjct: 393 QFEKMEEVLTAME-KGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTW 451
Query: 293 TTVISAYNMAREFDMCVKFYNE 314
T+ I AY+ ++++ C++ + E
Sbjct: 452 TSRIGAYSRRKQYNRCLEVFEE 473
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 13/226 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF-----LECESRKLDLTPSSTHMYK 64
+E+++ AG+ D Y +MEA+ + G A +F + CE + Y
Sbjct: 261 FEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRAS--------YN 312
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
I+ D+ G++G + F MK GI + L+ +++ +V EE+ + +
Sbjct: 313 IMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKS 372
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ D V ++ +Y G EK EV+ +M+ +++N + + +
Sbjct: 373 GIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARM 432
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+++ L ++ IP VT+ S I AY R Y++ +VF EM G
Sbjct: 433 EELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAG 478
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS-STHMYKILCD 68
+ M+ G D Y +++A+ + G E A+F ++L +TP+ +HM +L
Sbjct: 296 FSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVM--KRLGITPTMKSHM--LLLS 351
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ ++G+ + + M + GI D V S++ + + + + EE+ E+
Sbjct: 352 AYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPA 411
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI-VNGFSKRRAYWAAVKV 187
D+ + L+ +Y G + E+ S+ L I D ++ + +S+R+ Y ++V
Sbjct: 412 DISTYNILINIYGRAGFFARMEELFRSLPARNL-IPDVVTWTSRIGAYSRRKQYNRCLEV 470
Query: 188 YEQLISQGCIPGQVTYASII 207
+E++I GC P T +++
Sbjct: 471 FEEMIDAGCYPDGGTAKNVL 490
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 22/138 (15%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV---AYSSMVAMYGKTGRIRDA 254
P + Y +I+AY + LY KAE ++E+ + +CV Y+ ++ Y +G + A
Sbjct: 96 PDVICYNLLIDAYGQKSLYKKAESTYLELLEA---RCVPTEDTYALLLKAYCTSGLLEKA 152
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMD--MHG-----------RAKNLR---QLEKYTTVISA 298
+ A+M+ G P+ +YN+ +D M G R K R YT +I+
Sbjct: 153 EAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINL 212
Query: 299 YNMAREFDMCVKFYNEFR 316
Y A + M +K ++E R
Sbjct: 213 YGKASKSYMALKVFHEMR 230
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 136/284 (47%), Gaps = 21/284 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G + D+ Y +++ + ++ K+ FL E K + + Y I+ DS
Sbjct: 473 EMIGQGFIPDTSTYSKVLNY---LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G + K+F +M+E G + Y +LI ++ +V A ELF+ +G L ++
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC-----------------ISCVIVNG 174
+ L+ + + G VEK ++ E M ++ ++ D +++G
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSK-DVPDVDMYFKQYDDNSERPNVVTYGALLDG 648
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K A K+ + + +GC P Q+ Y ++I+ C++G +A++V EM + GF
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ YSS++ Y K R A ++++KM C PNV IY ++D
Sbjct: 709 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 752
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 135/252 (53%), Gaps = 20/252 (7%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ LC S GK +AF ++ R+M +G + D S Y+ ++ + +++++A LF+E +
Sbjct: 456 RCLC-SAGKYEKAFSVI---REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G++ D+ + +V + + G++E+ + M+ + +++ + K +
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF-----------IEMQQKGFD 232
A +++E ++S+GC+P VTY+++I+ +C+ G KA ++F ++M K +D
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 233 -----KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
VV Y +++ + K+ R+ +A +L+ M +GCEPN +Y++L+D + L
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 288 QLEKYTTVISAY 299
+ ++ T +S +
Sbjct: 692 EAQEVKTEMSEH 703
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 111/282 (39%), Gaps = 48/282 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKL------------DLT 56
+E M S G + + Y +++ K G EK +F C S+ + +
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
+ Y L D KS R E K M +G + VY +LI + ++ A+E
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ E E G L + L+ Y + +K +L
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFK-------------VKRQDL--------------- 727
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
A KV +++ C P V Y +I+ C++G +A K+ M++KG VV
Sbjct: 728 -------ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y++M+ +G G+I + L+ +M KG PN Y L+D
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/344 (18%), Positives = 147/344 (42%), Gaps = 35/344 (10%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G +LD C +E K+ D+ + CE ++ +Y L D L K G+
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEG----CEPNQI--------VYDALIDGLCKVGKL 690
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
E + +M E G Y+SLI + + +A ++ + E ++ ++ ++
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ + G ++ ++++ M+ + +++GF +++ E++ S+G
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P VTY +I+ C+ G A + EM+Q + Y ++ + K +++
Sbjct: 811 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLG 868
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAKN----LRQLEK--------------YTTVISA 298
L+ ++ P + +Y L+D +A+ LR LE+ Y ++I +
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 928
Query: 299 YNMAREFDMCVKFYNEFRMNGGVID-RAMAGIMVGVF--SKLSQ 339
+A + + + ++E G + + ++ ++ G+F SK+S+
Sbjct: 929 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 60/314 (19%), Positives = 117/314 (37%), Gaps = 40/314 (12%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T Y L L ++ E + F M+ L + Y++L+C + ++ + +
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEG-------MVEKTLEVVESMKNAELNI--------S 164
+G ++F LV Y G +++K ++ NI
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421
Query: 165 DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI 224
D ++C +++ A K Y ++++ G + ++ +S C G Y KA V
Sbjct: 422 DSLNCDLLD---------LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
EM +GF YS ++ ++ A L +MK G +V+ Y ++D +A
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 285 NLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAG 328
+ Q K YT +I AY A++ + + G + +
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 329 IMVGVFSKLSQIEE 342
++ K Q+E+
Sbjct: 593 ALIDGHCKAGQVEK 606
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+MK + Y +++E F K E + +L L E + D P + +Y++L D+L
Sbjct: 838 EEMKQTHWPTHTAGYRKVIEGFNK----EFIESLGLLDEIGQDDTAPFLS-VYRLLIDNL 892
Query: 71 GKSGRAFEILKFFRDMK--EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K+ R L+ ++ +++ S Y SLI S +V+ A +LF E +KG++
Sbjct: 893 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIP 952
Query: 129 DLEVFLKLV 137
+++ F L+
Sbjct: 953 EMQSFCSLI 961
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 136/284 (47%), Gaps = 21/284 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G + D+ Y +++ + ++ K+ FL E K + + Y I+ DS
Sbjct: 432 EMIGQGFIPDTSTYSKVLNY---LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 488
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G + K+F +M+E G + Y +LI ++ +V A ELF+ +G L ++
Sbjct: 489 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 548
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC-----------------ISCVIVNG 174
+ L+ + + G VEK ++ E M ++ ++ D +++G
Sbjct: 549 TYSALIDGHCKAGQVEKACQIFERMCGSK-DVPDVDMYFKQYDDNSERPNVVTYGALLDG 607
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K A K+ + + +GC P Q+ Y ++I+ C++G +A++V EM + GF
Sbjct: 608 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 667
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ YSS++ Y K R A ++++KM C PNV IY ++D
Sbjct: 668 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 711
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 135/252 (53%), Gaps = 20/252 (7%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ LC S GK +AF ++ R+M +G + D S Y+ ++ + +++++A LF+E +
Sbjct: 415 RCLC-SAGKYEKAFSVI---REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 470
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G++ D+ + +V + + G++E+ + M+ + +++ + K +
Sbjct: 471 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 530
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF-----------IEMQQKGFD 232
A +++E ++S+GC+P VTY+++I+ +C+ G KA ++F ++M K +D
Sbjct: 531 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 590
Query: 233 -----KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
VV Y +++ + K+ R+ +A +L+ M +GCEPN +Y++L+D + L
Sbjct: 591 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 650
Query: 288 QLEKYTTVISAY 299
+ ++ T +S +
Sbjct: 651 EAQEVKTEMSEH 662
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 111/282 (39%), Gaps = 48/282 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKL------------DLT 56
+E M S G + + Y +++ K G EK +F C S+ + +
Sbjct: 535 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 594
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
+ Y L D KS R E K M +G + VY +LI + ++ A+E
Sbjct: 595 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 654
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ E E G L + L+ Y + +K +L
Sbjct: 655 VKTEMSEHGFPATLYTYSSLIDRYFK-------------VKRQDL--------------- 686
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
A KV +++ C P V Y +I+ C++G +A K+ M++KG VV
Sbjct: 687 -------ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 739
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y++M+ +G G+I + L+ +M KG PN Y L+D
Sbjct: 740 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 781
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/344 (18%), Positives = 147/344 (42%), Gaps = 35/344 (10%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G +LD C +E K+ D+ + CE ++ +Y L D L K G+
Sbjct: 602 GALLDGFCKSHRVEEARKLLDAMSMEG----CEPNQI--------VYDALIDGLCKVGKL 649
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
E + +M E G Y+SLI + + +A ++ + E ++ ++ ++
Sbjct: 650 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 709
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ + G ++ ++++ M+ + +++GF +++ E++ S+G
Sbjct: 710 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 769
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P VTY +I+ C+ G A + EM+Q + Y ++ + K +++
Sbjct: 770 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLG 827
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAKN----LRQLEK--------------YTTVISA 298
L+ ++ P + +Y L+D +A+ LR LE+ Y ++I +
Sbjct: 828 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 887
Query: 299 YNMAREFDMCVKFYNEFRMNGGVID-RAMAGIMVGVF--SKLSQ 339
+A + + + ++E G + + ++ ++ G+F SK+S+
Sbjct: 888 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 931
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+MK + Y +++E F K E + +L L E + D P + +Y++L D+L
Sbjct: 797 EEMKQTHWPTHTAGYRKVIEGFNK----EFIESLGLLDEIGQDDTAPFLS-VYRLLIDNL 851
Query: 71 GKSGRAFEILKFFRDMK--EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K+ R L+ ++ +++ S Y SLI S +V+ A +LF E +KG++
Sbjct: 852 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIP 911
Query: 129 DLEVFLKLV 137
+++ F L+
Sbjct: 912 EMQSFCSLI 920
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 167/386 (43%), Gaps = 58/386 (15%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+++ G+ L++ CY +++++ + + + VA L E E+R ++ T + Y IL D L
Sbjct: 172 DELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGT---YTILVDGL 228
Query: 71 GKSGRAFEILKFFRDMKEKGILED---------------------------------PS- 96
++G ++ + +MK K + D P+
Sbjct: 229 SRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNE 288
Query: 97 -VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
Y +LI F I +++ AE L + + +G+ + VF ++ Y GMVEK LE+
Sbjct: 289 RTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAV 348
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
M+ + + + G + A K+ + +G P V+Y ++I+ + + G
Sbjct: 349 MEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGD 408
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+A ++F +M+ KG VV Y+ M+ Y K G IR+A R +M+ KG P+++ Y
Sbjct: 409 MVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAG 468
Query: 276 LMDMHGRAKN------LRQLEK------------YTTVISAYNMAREFDMCVKFYNEFRM 317
L +HG N LR E+ YT ++S + + Y++
Sbjct: 469 L--VHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLA 526
Query: 318 NGGVIDRAMAGIMVGVFSKLSQIEEL 343
G D + ++VG S+ + L
Sbjct: 527 AGLTPDDTLYSVLVGSLHTDSRKDPL 552
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 21/269 (7%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TP S ++ D KSG + ++ G+ + Y SL+ S+
Sbjct: 146 VTPLSA---SVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAV 202
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
L KE E +G+ + + LV G + K V + MK + ++N
Sbjct: 203 AGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINA 262
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+ + A +V+++ + G P + TY ++IN +C+IG AE + +MQ +G
Sbjct: 263 YCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHN 322
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--- 291
+ +++M+ Y + G + A+ + A M+ G E +++ YN+L R + +K
Sbjct: 323 QIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLH 382
Query: 292 -------------YTTVISAYNMAREFDM 307
YTT+IS + A+E DM
Sbjct: 383 IMAEKGVAPNYVSYTTLISIH--AKEGDM 409
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
+++ + V+V+GF K + A + ++L G Y S++++Y R
Sbjct: 145 SVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAG 204
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ EM+ +G + V Y+ +V + G I + +MK K +V+ Y+++++ +
Sbjct: 205 LLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYC 264
Query: 282 RAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
R N+R+ + FD CV +G + G ++ F K+ QIE
Sbjct: 265 RGGNVRRASEV------------FDECVG-------HGVEPNERTYGALINGFCKIGQIE 305
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 138/284 (48%), Gaps = 6/284 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M AG+ D Y +++ ++G E +F + R + P++ ++ IL D+
Sbjct: 174 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGM--KPNAV-VFTILIDA 230
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G A +L+ R+M+E+G+ D Y +++ ++K A + E G+ D
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 290
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y +E ++ +E+ ++M + + + +++G SK A +V
Sbjct: 291 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 350
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ G P TY +I+A+CR G ++ EMQ KG VV Y+ ++ + K G
Sbjct: 351 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 410
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLE 290
++++A L+ M G P+ YN L+D HG+ ++ +L+
Sbjct: 411 QMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELK 454
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 3/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+Y ++ AG+ ++ + +M ++G+ +F E +SR + T S + +
Sbjct: 103 FYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVS---FNTMIS 159
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ ++G R M E G+ D Y +LI + ++ A +F++ +GM
Sbjct: 160 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 219
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ VF L+ + ++G E LE+ M+ + IVNG + R +A +
Sbjct: 220 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 279
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ S G P VTY ++I+ YC+ A ++ M +G V Y+++++ K
Sbjct: 280 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKA 339
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR DA R++ +M G EP+ Y ++D
Sbjct: 340 GRSADAERVLGEMMEAGLEPDNTTYTMVID 369
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/301 (18%), Positives = 118/301 (39%), Gaps = 16/301 (5%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P ++ +L L + G F +M+ +G+ + ++I ++ AE
Sbjct: 113 PPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAET 172
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L + E G+ D+ + L+ G +E V E M + + + ++++
Sbjct: 173 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 232
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K+ ++++ ++ +G P VTY +I+N CR A + +EM+ G V
Sbjct: 233 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 292
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
Y++++ Y K + AM + M +G + Y +L+ +A E+
Sbjct: 293 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 352
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
YT VI A+ + ++ E + G +++ F KL Q+
Sbjct: 353 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM 412
Query: 341 E 341
+
Sbjct: 413 K 413
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 108/264 (40%), Gaps = 19/264 (7%)
Query: 89 KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
+GI +P+ L+ F + E A + + + G+ + ++F L+ + G +
Sbjct: 78 RGIRLEPTSCTGLMSRFPTAPE---ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELAS 134
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
V + M++ + + +++G + A ++ ++ G P TY ++I
Sbjct: 135 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 194
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
CR+G A VF +M +G V ++ ++ + K G + L +M+ +G P
Sbjct: 195 GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRP 254
Query: 269 NVWIYNSLMDMHGRAKNLRQLE----------------KYTTVISAYNMAREFDMCVKFY 312
+ YN++++ RA++L+ YTT+I Y E DM ++
Sbjct: 255 DAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIK 314
Query: 313 NEFRMNGGVIDRAMAGIMVGVFSK 336
G +D ++ SK
Sbjct: 315 QNMVAEGVGLDEVTYTALISGLSK 338
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 129/279 (46%), Gaps = 5/279 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH+++K+ + GI D Y ++ KIGD+ L + + R LT + MY +
Sbjct: 149 LHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGR---LTKPNVEMYNTI 205
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+L K E F +M KGI D Y +LI F +++K A L E K +
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTI 265
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + LV +EG V++ V+ M A + +++G+ A
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQH 325
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+ + G P +Y +IN +C+ + +A +F EM QK +V YSS++
Sbjct: 326 VFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC 385
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
K+GRI L+ +M+ +G NV YNSL+D G KN
Sbjct: 386 KSGRISYVWDLIDEMRDRGIPANVITYNSLID--GLCKN 422
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 93/196 (47%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F M G+ D Y LI F V A LFKE +K M+ + + L+ +
Sbjct: 327 FNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G + ++++ M++ + + +++G K A+ ++ ++ QG P T
Sbjct: 387 SGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFT 446
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
+ +++ C+ G A++ F ++ KG+ V Y+ M+ + K G + +A+ +++KM+
Sbjct: 447 FTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKME 506
Query: 263 PKGCEPNVWIYNSLMD 278
GC PN ++ +++
Sbjct: 507 ENGCVPNAVTFDIIIN 522
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 122/303 (40%), Gaps = 17/303 (5%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP KIL DS K + ++ KGI D LI F + ++
Sbjct: 56 TPPIIQFNKIL-DSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ + ++G F L+ +G V K L + + + ++NG
Sbjct: 115 SVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGV 174
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A+K+ ++ + P Y +II+A C+ L S+A +F EM KG V
Sbjct: 175 CKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADV 234
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQLE-- 290
V Y++++ + ++++A+ L+ +M K PNV+ YN L+D G+ K + +
Sbjct: 235 VTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAV 294
Query: 291 -----------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
Y+T++ Y + E +N + G D I++ F K
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKM 354
Query: 340 IEE 342
++E
Sbjct: 355 VDE 357
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 111/253 (43%), Gaps = 3/253 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M A + D Y +M+ ++ + + +K +F + +TP H Y IL + K
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYELKKAQHVF--NAMSLMGVTPD-VHSYTILINGFCK 351
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ E L F++M +K ++ Y+SLI + +L E ++G+ ++
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVIT 411
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + G +++ + + MK+ + ++++G K A + ++ L+
Sbjct: 412 YNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLL 471
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
++G Y +IN +C+ GL +A + +M++ G V + ++ K
Sbjct: 472 TKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDEND 531
Query: 253 DAMRLVAKMKPKG 265
A +L+ +M +G
Sbjct: 532 KAEKLLRQMICRG 544
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 138/277 (49%), Gaps = 3/277 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M GI + Y ++ A+ KI D E V + E K+ ++ Y +L + G
Sbjct: 240 EMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAAT---YTLLIEWYG 296
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
SG+ E K F M E+G+ D V+ S+I + +K A LF E E+G++ +
Sbjct: 297 SSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAH 356
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ G ++ +V M++ L+++ I ++NG+ K+ A+++ + +
Sbjct: 357 TYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVM 416
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+G TY +I C++ + +A++ M +KG D V+++ M+ ++ K G +
Sbjct: 417 EKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNL 476
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+A R+ MK KG +PNV YN+L+D + + L++
Sbjct: 477 VEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKE 513
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 40/272 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+EKM G+ D + I+ K+G+ ++ ALF E
Sbjct: 308 FEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDE---------------------- 345
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ E+G++ + Y +LI + ++ AE L E + +G+ +
Sbjct: 346 ----------------LNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMN 389
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L +F L+ Y ++GM+++ L + + M+ I G K + A +
Sbjct: 390 LVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLF 449
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P V++ +I+ +C+ G +AE+VF +M++KG VV Y++++ Y K G
Sbjct: 450 TMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKG 509
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++++A RL +M+ G +++ Y +L +HG
Sbjct: 510 KLKEAYRLKDEMESIGMTSDIYTYTTL--VHG 539
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 3/225 (1%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
K+D+T S I+ D L K GR +M KGI + Y +L+ ++ I +
Sbjct: 210 KVDVTVYSM---TIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDF 266
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+ E+ + E ++ + + L+ Y G + + +V E M + + I
Sbjct: 267 EGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSI 326
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ K A ++++L +G + TY ++I+ C G AE + EMQ +G
Sbjct: 327 ISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGL 386
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
D +V +++++ Y K G I +A+R+ M+ KG E +++ YN++
Sbjct: 387 DMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTI 431
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 127/280 (45%), Gaps = 4/280 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + ++++ G+V ++ Y ++ G + L E +S+ LD+ +
Sbjct: 335 NMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDM---NLV 391
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
++ L + K G E L+ M++KG D Y ++ + + A+
Sbjct: 392 IFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTM 451
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
EKG+ + F ++ ++ +EG + + V + MK + +++G+SK+
Sbjct: 452 VEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKL 511
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++ +++ S G TY ++++ C G +A + E+ +KG +V Y+++
Sbjct: 512 KEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAI 571
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-DMH 280
++ K GR +A RL +M G P+ +Y SL+ ++H
Sbjct: 572 ISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLH 611
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 103/212 (48%), Gaps = 4/212 (1%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLIC--SFASIAEVKVAEELFKEAEEKGM 126
+L +S + L FF+ M E + D +VY+ I V+ A++L E KG+
Sbjct: 189 ALKRSDQMVMSLGFFKKMVEFKV--DVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGI 246
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + LV YI+ E E++ M+ ++ + +++ + A K
Sbjct: 247 KPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEK 306
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+E+++ +G + SII+ C++G +A +F E+ ++G Y +++
Sbjct: 307 VFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTC 366
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+G++ A LV +M+ +G + N+ I+N+L++
Sbjct: 367 NSGQLDAAEMLVNEMQSQGLDMNLVIFNTLIN 398
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 80/188 (42%), Gaps = 35/188 (18%)
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISD--CISC------------------------ 169
L +Y++ M E+ +V + M + L I D CI C
Sbjct: 151 LFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFK 210
Query: 170 ---------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
++++G K+ A + ++ +G P VTY +++NAY +I +
Sbjct: 211 VDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVN 270
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
++ M+ Y+ ++ YG +G+I +A ++ KM +G E ++ ++ S++
Sbjct: 271 EMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQ 330
Query: 281 GRAKNLRQ 288
+ N+++
Sbjct: 331 CKLGNMKR 338
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 92/244 (37%), Gaps = 42/244 (17%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + M+ G D Y I K+ E+ + +D S + I+
Sbjct: 410 LRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVS---FTIM 466
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
D K G E + F+DMK+KG E P+V Y +LI ++ ++K A L E E
Sbjct: 467 IDIHCKEGNLVEAERVFQDMKKKG--EKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESI 524
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
GM D+ + LV G VE+ L ++
Sbjct: 525 GMTSDIYTYTTLVHGECVFGKVEEALTLLN------------------------------ 554
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ +G VTY +II+ + G +A +++ EM G Y+S+VA
Sbjct: 555 -----EVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVAN 609
Query: 245 YGKT 248
KT
Sbjct: 610 LHKT 613
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 113/217 (52%), Gaps = 1/217 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L K+GRA E + F DMK K D Y+ LI F + + +A LF +
Sbjct: 325 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 384
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++ +L D+ F LV Y G+V+ ++E M ++ + +V+GF K
Sbjct: 385 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMV 444
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +V +++ +GC P VTY ++I+A+CR G + A K+ EM G V+ Y S++
Sbjct: 445 EARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLI 504
Query: 243 AMYGKTGRIRDAMRLVAKM-KPKGCEPNVWIYNSLMD 278
+ TG + +A +++ ++ + + C+ +++ Y +MD
Sbjct: 505 GGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMD 541
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 5/275 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC-ESRKLDLTPSSTHMYKILCD 68
+EKM+ D + +M+ K GD + A LE E R + TP+ Y L D
Sbjct: 205 FEKMRENSCEPDVVTFTALMDGLCK-GDRLQEAQQVLETMEDR--NCTPNVI-TYSSLID 260
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K+G+ + + F+ M +GI + Y SLI F V A L +E G L
Sbjct: 261 GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLP 320
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ + G + + MK N ++ GF K A ++
Sbjct: 321 DIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLF 380
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ ++ Q +P VT+++++ YC GL AE++ EM V Y+S+V + K
Sbjct: 381 DDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKV 440
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
GR+ +A R++ +M +GC+PNV Y +L+D RA
Sbjct: 441 GRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 475
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 21/280 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L ++G E + +M+E+G+ D Y +L+ ++ +A ++F++
Sbjct: 115 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 174
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
D+ + L+ + G +++ ++ E M+ +++G K
Sbjct: 175 NGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 234
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +V E + + C P +TY+S+I+ C+ G A++VF M +G + VV Y+S++
Sbjct: 235 EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 294
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+ T + A+ L+ +M GC P++ YN+L+D G K R E
Sbjct: 295 HGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLID--GLCKTGRAPEA----------N 342
Query: 303 REF-DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
R F DM KF N D ++G F KL +I+
Sbjct: 343 RLFGDMKAKFCNP--------DVITYSCLIGGFCKLERID 374
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 70/273 (25%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ I+ D L K+ R E +F MK+KG + + Y LI F + +V A L KE +
Sbjct: 10 WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 69
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G+ ++ + +++GF ++
Sbjct: 70 ESGLAPNVVTY-----------------------------------STVIHGFCRQTKVD 94
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DK------- 233
A K++ Q++ GC+P VTY ++++ CR GL +A ++ EM+++G DK
Sbjct: 95 TAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLM 154
Query: 234 ---C-----------------------VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
C VVAYS+++A KTGR+ +A +L KM+ CE
Sbjct: 155 AGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCE 214
Query: 268 PNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
P+V + +LMD + L++ ++ + N
Sbjct: 215 PDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 126/277 (45%), Gaps = 16/277 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L + K + ++MKE G+ + Y+++I F +V A +LF++
Sbjct: 45 YNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV 104
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G + +L + L+ G++++ E+++ M+ L ++ G K
Sbjct: 105 ENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKID 164
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+KV+E + C P V Y+++I C+ G +A K+F +M++ + VV +++++
Sbjct: 165 MALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALM 224
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------- 291
K R+++A +++ M+ + C PNV Y+SL+D + +R ++
Sbjct: 225 DGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE 284
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
Y ++I + M D + E G + D
Sbjct: 285 PNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPD 321
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 1/229 (0%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E R+ L P Y L L K+G+ LK F D D Y++LI
Sbjct: 137 EMRERGLQPDK-FSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKT 195
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ A +LF++ E D+ F L+ + +++ +V+E+M++ +
Sbjct: 196 GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 255
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++G K A +V++++I +G P VTY S+I+ +C A + EM
Sbjct: 256 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 315
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G ++ Y++++ KTGR +A RL MK K C P+V Y+ L+
Sbjct: 316 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLI 364
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 143/296 (48%), Gaps = 5/296 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +E+M+ G+ D + ++ + E +F E + R ++ Y L
Sbjct: 290 LDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIE---QDIFTYNTL 346
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D++ K G+ M+ K I + Y+++I + + + A L+ + +E G+
Sbjct: 347 IDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGV 406
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ +Y + G + L + M+ L +++ + K+ Y A
Sbjct: 407 RPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAG 466
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++ ++G +P +TY+++I+AY + G++ A +F+E ++ G VV YSS++
Sbjct: 467 LFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCC 526
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE--KYTTVISAYN 300
K G + DA+ L+ +M G +PN+ YNSL+D +GR + +E K I+ +N
Sbjct: 527 KCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFN 582
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 125/264 (47%), Gaps = 40/264 (15%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMK------------------------------ 87
++ + Y + + G+SGR E LK F+ MK
Sbjct: 232 NNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALD 291
Query: 88 ------EKGILEDPSVYASLI--CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
++G+ D + SLI CS S+ E ++ +F E + +G+ +D+ + L+
Sbjct: 292 IFEEMQKEGVEPDRITFNSLIAVCSRGSLWE--DSQRVFAEMQRRGIEQDIFTYNTLIDA 349
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G +E ++ SM+ ++ + +++G+ K + A+ +Y + G P
Sbjct: 350 VCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPD 409
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+V+Y ++I+ Y ++G + A +M++ G VV Y++++ YGK G+ +DA L
Sbjct: 410 RVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFD 469
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRA 283
KMK +G PNV Y++L+D + +A
Sbjct: 470 KMKAEGLVPNVLTYSALIDAYSKA 493
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 150/319 (47%), Gaps = 29/319 (9%)
Query: 27 QIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDM 86
+I+ A G+S AL LE S +L + L LG G L+ + M
Sbjct: 136 EILSAPSMSGNS---TALLLEKWSHQL----VGLEDFPYLLRELGNRGEWERALQGYEWM 188
Query: 87 KEKGIL--EDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
++G L E + + +I + + +V++A ++F A++ G ++ + +V Y G
Sbjct: 189 VQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSG 248
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA-YWAAVKVYEQLISQGCIPGQVTY 203
+ L+V ++MK A + I++ K A+ ++E++ +G P ++T+
Sbjct: 249 RCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITF 308
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
S+I R L+ +++VF EMQ++G ++ + Y++++ K G++ A +++ M+
Sbjct: 309 NSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRL 368
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
K PNV Y++++D +G+ F+ + Y++ + +G D
Sbjct: 369 KNISPNVVTYSTMIDGYGKLGC-------------------FEEAIGLYHDMKESGVRPD 409
Query: 324 RAMAGIMVGVFSKLSQIEE 342
R ++ +++KL + ++
Sbjct: 410 RVSYNTLIDIYAKLGRFDD 428
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 30/281 (10%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ + K+G E+ L+ + ++ + P Y L D K GR + L +
Sbjct: 378 YSTMIDGYGKLGCFEEAIGLYHDM--KESGVRPDRVS-YNTLIDIYAKLGRFDDALTACK 434
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
DM+ G+ D Y +LI ++ + K A LF + + +G++ ++ + L+ Y + G
Sbjct: 435 DMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAG 494
Query: 145 MVEKTLEVVESMKNAELN---------ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
M + + K A L I C C +V AV + +++ G
Sbjct: 495 MHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVED---------AVVLLQEMTQAG 545
Query: 196 CIPGQVTYASIINAYCRIGLYSKAE--------KVFIEMQQKGFDKCVVAYSSMVAMYGK 247
P VTY S+I+AY R G E VF ++ + + +S
Sbjct: 546 IQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDH 605
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
TG + A+ + +M+ G +PNV ++++++ R +L++
Sbjct: 606 TG-VLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQE 645
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 20/280 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M+ G+ D Y +++A+ K G + A LF + ++ L P+ Y L D+
Sbjct: 434 KDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAE--GLVPN-VLTYSALIDAY 490
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+G + F + K G+ D +Y+SLI S V+ A L +E + G+ ++
Sbjct: 491 SKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNI 550
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMK-NAELNISD----------CISCVIVNGFSKRR 179
+ L+ Y G V+ VE+ K N +N+ + C + +
Sbjct: 551 VTYNSLIDAYGRNGQVDN----VEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHT 606
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
AAV V+ ++ G P VT+++I+NA R +A V +E Q + FD V +
Sbjct: 607 GVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEAS-VLLE-QMRFFDSWVYGIA 664
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ M + +A RL ++ YN+L D+
Sbjct: 665 HGLLMGLREHVWVEAQRLFDEIARMDYATGAAFYNALTDV 704
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 138/284 (48%), Gaps = 6/284 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M AG+ D Y +++ ++G E +F + R + P++ ++ IL D+
Sbjct: 298 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGM--KPNAV-VFTILIDA 354
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G A +L+ R+M+E+G+ D Y +++ ++K A + E G+ D
Sbjct: 355 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 414
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y +E ++ +E+ ++M + + + +++G SK A +V
Sbjct: 415 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 474
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ G P TY +I+A+CR G ++ EMQ KG VV Y+ ++ + K G
Sbjct: 475 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 534
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLE 290
++++A L+ M G P+ YN L+D HG+ ++ +L+
Sbjct: 535 QMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELK 578
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 3/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+Y ++ AG+ ++ + +M ++G+ +F E +SR + T S + +
Sbjct: 227 FYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVS---FNTMIS 283
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ ++G R M E G+ D Y +LI + ++ A +F++ +GM
Sbjct: 284 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 343
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ VF L+ + ++G E LE+ M+ + IVNG + R +A +
Sbjct: 344 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 403
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ S G P VTY ++I+ YC+ A ++ M +G V Y+++++ K
Sbjct: 404 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKA 463
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR DA R++ +M G EP+ Y ++D
Sbjct: 464 GRSADAERVLGEMMEAGLEPDNTTYTMVID 493
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/301 (18%), Positives = 118/301 (39%), Gaps = 16/301 (5%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P ++ +L L + G F +M+ +G+ + ++I ++ AE
Sbjct: 237 PPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAET 296
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L + E G+ D+ + L+ G +E V E M + + + ++++
Sbjct: 297 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 356
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K+ ++++ ++ +G P VTY +I+N CR A + +EM+ G V
Sbjct: 357 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 416
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
Y++++ Y K + AM + M +G + Y +L+ +A E+
Sbjct: 417 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 476
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
YT VI A+ + ++ E + G +++ F KL Q+
Sbjct: 477 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM 536
Query: 341 E 341
+
Sbjct: 537 K 537
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 108/264 (40%), Gaps = 19/264 (7%)
Query: 89 KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
+GI +P+ L+ F + E A + + + G+ + ++F L+ + G +
Sbjct: 202 RGIRLEPTSCTGLMSRFPTAPE---ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELAS 258
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
V + M++ + + +++G + A ++ ++ G P TY ++I
Sbjct: 259 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 318
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
CR+G A VF +M +G V ++ ++ + K G + L +M+ +G P
Sbjct: 319 GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRP 378
Query: 269 NVWIYNSLMDMHGRAKNLRQLE----------------KYTTVISAYNMAREFDMCVKFY 312
+ YN++++ RA++L+ YTT+I Y E DM ++
Sbjct: 379 DAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIK 438
Query: 313 NEFRMNGGVIDRAMAGIMVGVFSK 336
G +D ++ SK
Sbjct: 439 QNMVAEGVGLDEVTYTALISGLSK 462
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 141/301 (46%), Gaps = 16/301 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M G+ D Y +++ F + G E +F E R + P++ ++ L D+
Sbjct: 243 YKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMF--NEMRDTGVNPNAV-VFTTLIDA 299
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G + ++DM+ +G++ D Y +L+ +K AE + +E + G+ D
Sbjct: 300 HCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPD 359
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ ++G ++ +++ + M E+++ + +++G SK A +V
Sbjct: 360 KVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLR 419
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ P TY +I+A+CR G K+ EMQ KG VV Y+ ++ K G
Sbjct: 420 EMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLG 479
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEK----------YTTVI 296
++++A L+ M G P+ YN L+D HG+ N +LE YT++I
Sbjct: 480 QMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESSKGMVPDFAVYTSLI 539
Query: 297 S 297
S
Sbjct: 540 S 540
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 89 KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
+GI V + L+ S E A + + + GM + +F L+ ++ G +
Sbjct: 148 RGISLPAPVCSGLMSRLPSTPE---AYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVS 204
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+V + M+ + + + +++G + R A +Y+++ G P TY ++I
Sbjct: 205 ARKVFDEMRRS-VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIK 263
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+CR G A K+F EM+ G + V +++++ + K G + M L M+ +G P
Sbjct: 264 GFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMP 323
Query: 269 NVWIYNSLMDMHGRAKNLRQLE 290
++ YN+L++ RA+NL+ E
Sbjct: 324 DLVAYNALVNGLCRARNLKAAE 345
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 97/218 (44%), Gaps = 1/218 (0%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T ++ +L + G K F +M+ + + + +LI ++ + L+K
Sbjct: 186 TRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAVDGLYK 244
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E + G+ D+ + L+ + G +E +++ M++ +N + + +++ K
Sbjct: 245 EMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEG 304
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A + +Y+ + +G +P V Y +++N CR AE + EM+ G V Y+
Sbjct: 305 NVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYT 364
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+++ K G++ AM + KM K + Y +L+
Sbjct: 365 TLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALI 402
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 138/284 (48%), Gaps = 20/284 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G + D+ Y +++ + ++ K+ FL E K + + Y I+ DS
Sbjct: 473 EMIGQGFIPDTSTYSKVLGY---LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G + K+F +M+E G + Y +LI ++ +V A ELF+ +G L ++
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESM-------------KNAELNISDCISCVI----VNG 174
+ L+ + + G +EK ++ E M K + + S+ + VI ++G
Sbjct: 590 TYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDG 649
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K A K+ + + +GC P Q+ Y ++I+ C++G +A++V EM + GF
Sbjct: 650 FCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPAT 709
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ YSS++ Y K R A ++++KM C PNV IY ++D
Sbjct: 710 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 753
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 125/232 (53%), Gaps = 21/232 (9%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ LC S GK +AF ++ R+M +G + D S Y+ ++ + +++++A LF+E +
Sbjct: 456 RCLC-SAGKYEKAFSVI---REMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKR 511
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G++ D+ + +V + + G++E+ + M+ + +++ + K +
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF-----------IEMQQKGFD 232
A +++E ++S+GC+P VTY+++I+ +C+ G KA ++F ++M K +D
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 233 ------KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
VV Y +++ + K R+ +A +L+ M +GCEPN +Y++L+D
Sbjct: 632 DDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALID 683
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 112/283 (39%), Gaps = 49/283 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKL-------------DL 55
+E M S G + + Y +++ K G EK +F C S+ + +
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNS 635
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
+ +Y L D K R E K M +G + VY +LI + ++ A+
Sbjct: 636 ERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 695
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
E+ E E G L + L+ Y + +K +L
Sbjct: 696 EVKAEMSEHGFPATLYTYSSLIDRYFK-------------VKRQDL-------------- 728
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
A KV +++ C P V Y +I+ C++G +A K+ M++KG V
Sbjct: 729 --------ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 780
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y++M+ +G+ G+I + L+ +M KG PN Y L+D
Sbjct: 781 VTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLID 823
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 138/335 (41%), Gaps = 48/335 (14%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKS--GRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
R P+ +LC L K GR +L M +G P ++ SL+ ++ +
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM---MMMEGCYPSPKIFNSLVHAYCTS 385
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLV--LMYIEEGMVEKTLEVVESMKNAELNISDC 166
+ A +L K+ + G V+ L+ + ++ + LE+ E + L
Sbjct: 386 GDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVV 445
Query: 167 ISCVIVNGFSK----RRAYWAAVKVYEQLISQGCIPGQVTYASI---------------- 206
++ + V+ F++ Y A V ++I QG IP TY+ +
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLL 505
Query: 207 -------------------INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++++C+ GL +A K F EM++ G VV Y++++ Y K
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDM 307
++ A L M +GC PN+ Y++L+D H +A + + + + + DM
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDM 625
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
K Y++ N + + G ++ F KL ++EE
Sbjct: 626 YFKQYDD--DNSERPNVVIYGALLDGFCKLHRVEE 658
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 147/344 (42%), Gaps = 35/344 (10%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G +LD C +E K+ D+ + CE ++ +Y L D L K G+
Sbjct: 644 GALLDGFCKLHRVEEARKLLDAMSMEG----CEPNQI--------VYDALIDGLCKVGKL 691
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
E + +M E G Y+SLI + + +A ++ + E ++ ++ ++
Sbjct: 692 DEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 751
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ + G ++ ++++ M+ + +++GF + +++ E++ S+G
Sbjct: 752 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGV 811
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P VTY +I+ C+ G A + EM+Q + Y ++ + K +++
Sbjct: 812 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNK--EFIESLG 869
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAKN----LRQLEK--------------YTTVISA 298
L+ ++ P + +Y L+D +A+ LR LE+ Y ++I +
Sbjct: 870 LLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 929
Query: 299 YNMAREFDMCVKFYNEFRMNGGVID-RAMAGIMVGVF--SKLSQ 339
+A + D + ++E G + + + ++ G+F SK+S+
Sbjct: 930 LCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISE 973
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 40/227 (17%)
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK----LVLMYIE 142
++ G VY +L+ + KV EEL ++ + D EVF + LV Y
Sbjct: 157 RQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDD----DKEVFGEFLNVLVRKYCR 212
Query: 143 EGMVEKTLEVVESMKNAELNIS--------------DCISCVIV------------NGFS 176
G LE + +K+ S DC+ + +GF+
Sbjct: 213 SGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFT 272
Query: 177 KRRAYWAAVKV---YEQLI---SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
R ++ KV E L ++ +P V Y +I+ C L+ +A M+
Sbjct: 273 LRCYAYSLCKVGKWREALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
VV YS+++ ++ R++ M +GC P+ I+NSL+
Sbjct: 333 CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+MK + Y +++E F K E + +L L E + D P + +Y++L D+L
Sbjct: 839 EEMKQTHWPTHAAGYRKVIEGFNK----EFIESLGLLDEIGQDDTAPFLS-LYRLLVDNL 893
Query: 71 GKSGRAFEILKFFRDMK--EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K+ R L+ ++ +++ S Y SLI S +V A LF E +KG++
Sbjct: 894 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIP 953
Query: 129 DLEVFLKLV 137
+++ F L+
Sbjct: 954 EMQTFCSLI 962
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 132/276 (47%), Gaps = 4/276 (1%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
S+ +++ M + G D YC ++ + G + LF S K + ++ H+
Sbjct: 386 SKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLF---NSMKSNGIAANCHV 442
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ IL + K G + + F +M+++G+ D Y+++I +F+ + + A E F +
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV 502
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
+G+ + V+ ++ + G + K E+V M N + D + ++N K
Sbjct: 503 ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRV 562
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++ G PG +T+ S+I+ YC +G KA K+ M+ G + +V Y+++
Sbjct: 563 MDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTL 622
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ Y K GRI D + L +M+ KG +PN Y ++
Sbjct: 623 LDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIML 658
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 124/270 (45%), Gaps = 4/270 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G+ D Y I++A K +K + + + D T Y +
Sbjct: 288 FHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTT---DGAQPDTVTYSCMIHG 344
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GR E K FR+MK++G++ + S + S K A E F KG D
Sbjct: 345 YATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPD 404
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y EG + + SMK+ + + + ++++ ++KR A+ ++
Sbjct: 405 IFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFT 464
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ QG P VTY+++I+ + R+G + A + F +M +G YSS++ + G
Sbjct: 465 EMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHG 524
Query: 250 RIRDAMRLVAKMKPKGC-EPNVWIYNSLMD 278
+ A LV++M KG P++ ++S+++
Sbjct: 525 GLVKAKELVSEMINKGIPRPDIVFFSSVIN 554
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 142 EEGMVEKTLEVVESM-KNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ M ++ L++++ M K D ++ +++GF A ++ ++ QG P
Sbjct: 240 DNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPD 299
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY II+A C+ KAE V +M G V YS M+ Y GR+++A ++
Sbjct: 300 VVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFR 359
Query: 260 KMKPKGCEPNVWIYNSLMDM---HGRAKNLRQ-------------LEKYTTVISAYNMAR 303
+MK +G PN+ NS + HGR+K + + Y T++ Y
Sbjct: 360 EMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEG 419
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
F + +N + NG + + I++ ++K +++
Sbjct: 420 CFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDD 458
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 112/277 (40%), Gaps = 13/277 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M + GI ++ Y I++ F G K L E ++ + P ++ +S
Sbjct: 498 FNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIP-RPDIVFFSSVI-NS 555
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGML 127
L K GR + F + G E P V + SLI + + ++ A ++ E G+
Sbjct: 556 LCKDGRVMDAHDIFDLATDIG--ERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVE 613
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ + L+ Y + G + L + M+ + + +++ G + AA K
Sbjct: 614 PDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKK 673
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYG 246
+ ++I G Y I+ CR +A +F ++ + ++M+ AMY
Sbjct: 674 FHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMY- 732
Query: 247 KTGRIRDAMRLVAKMKPKGCEPN-----VWIYNSLMD 278
K R +A L A + G PN V I N L D
Sbjct: 733 KVQRKEEAKELFATISASGLLPNESTYGVMIINLLKD 769
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 99/246 (40%), Gaps = 12/246 (4%)
Query: 19 VLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE 78
++D C M+ +KI D+ +V + + D+ Y L D K+GR +
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGV-------EPDIV-----TYNTLLDGYFKNGRIND 634
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
L FR+M+ KG+ + Y ++ A + F E E G + ++ ++
Sbjct: 635 GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILG 694
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
++ + + + + + S I ++N K + A +++ + + G +P
Sbjct: 695 GLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLP 754
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
+ TY +I + G A +F M++ G + ++ M + G I A +
Sbjct: 755 NESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL 814
Query: 259 AKMKPK 264
+K+ K
Sbjct: 815 SKVDGK 820
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 160/345 (46%), Gaps = 29/345 (8%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD---S 69
M+ +V Y +++ + GD E+ +F E + +++ ++Y +
Sbjct: 278 MEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEM---DVYVYSSMISWSRR 334
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG RAF + F +M ++ I+ + Y +LI +++ AE L E + KG+ +
Sbjct: 335 LGNMKRAFAL---FDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLN 391
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L +F + Y G +++ L + M+ +N ++ NG K Y A +
Sbjct: 392 LVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILN 451
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P VT+ I YC+ G ++AE++F +M++KG ++ Y++++ Y K
Sbjct: 452 SMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKE 511
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG-----------------RAKNL-RQLEK 291
+++ A ++ ++M KG P+++ Y+SL+ HG R K + R +
Sbjct: 512 KVKQAHKIKSEMINKGLLPDLYTYSSLI--HGECIVGRVDEALKLFNEMRLKGITRNVAT 569
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
YT++IS + D K Y+E G + D + +VG F K
Sbjct: 570 YTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 138/300 (46%), Gaps = 16/300 (5%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S Y IL SG E K F +M+EK I D VY+S+I + +K A LF
Sbjct: 286 SVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALF 345
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E ++ ++ + + L+ + G +E ++ M++ ++++ I ++G+ +R
Sbjct: 346 DEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRR 405
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A+++ + +G TY + N C++ Y +A+ + M +KG VV +
Sbjct: 406 GKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTF 465
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------- 291
+ + +Y K G + +A RL M+ KG PN+ YN+L+D + + + ++Q K
Sbjct: 466 TMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMIN 525
Query: 292 ---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+++I + D +K +NE R+ G + A M+ SK + +E
Sbjct: 526 KGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADE 585
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 7/278 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + +++M IV ++ Y ++ K G E L LE +S+ +DL +
Sbjct: 337 NMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDL---NLV 393
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
++ D + G+ E L+ M++KGI D Y L + A+ +
Sbjct: 394 IFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSM 453
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCIS-CVIVNGFSKRR 179
EKG+ ++ F + +Y +EG + + + M K E + + I+ +++ + K+
Sbjct: 454 VEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGE--VPNIITYNTLIDAYCKKE 511
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A K+ ++I++G +P TY+S+I+ C +G +A K+F EM+ KG + V Y+
Sbjct: 512 KVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYT 571
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
SM++ K GR +A +L +M G P+ ++ SL+
Sbjct: 572 SMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 103/220 (46%), Gaps = 2/220 (0%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICS-FASIAEVKVAEELFKEAEE 123
+L +L + G ++FF M E E +L+ EV+ A+EL E
Sbjct: 185 VLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVG 244
Query: 124 KGMLR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+++ ++ + L+ Y+ + E+++ M+ ++ S +++ +S
Sbjct: 245 KGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIE 304
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K++E++ + Y+S+I+ R+G +A +F EM Q+ Y +++
Sbjct: 305 EAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALI 364
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
K G++ A L+ +M+ KG + N+ I+N+ MD + R
Sbjct: 365 GGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCR 404
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 2 NSQSKLHYYEKMK-------SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD 54
N KLH Y++ K G+ + + +E + K G+ + LF + E +
Sbjct: 435 NGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKG-- 492
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+ Y L D+ K + + K +M KG+L D Y+SLI + V A
Sbjct: 493 -EVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEA 551
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+LF E KG+ R++ + ++ +EG ++ ++ + M L D + +V
Sbjct: 552 LKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGS 611
Query: 175 FSK 177
F K
Sbjct: 612 FHK 614
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 3/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ M+ G+ D Y ++ A+ + G E+ L + L Y + +
Sbjct: 380 FLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLK---PCVFTYNAIIN 436
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K+G+ +M + G+ D + Y L+ + AE +F E +G++
Sbjct: 437 GLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVP 496
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
DL F L+ + + G +++ L+ MKNA L + I +++ GF + A+KV
Sbjct: 497 DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVR 556
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++ QGC VTY +I+N C+ + S+A+++F EM ++G +++++ Y K
Sbjct: 557 DEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKD 616
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G + A+ L M + +P+V YN+L+D
Sbjct: 617 GNMNKAVTLFEMMIQRNLKPDVVTYNTLID 646
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 150/333 (45%), Gaps = 22/333 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S G+V D + ++ K G ++ F + + L P + +Y IL
Sbjct: 486 FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM--KNAGLAPDNV-IYTILIGG 542
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++G E LK +M E+G D Y +++ + A+ELF E E+G+ D
Sbjct: 543 FCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD 602
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F L+ Y ++G + K + + E M L +++GF K +++
Sbjct: 603 FYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWN 662
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+IS+ P ++Y +IN YC +G S+A +++ EM +KGF+ ++ +++V Y + G
Sbjct: 663 DMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAG 722
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
A ++ M KG P+ YN+L++ I NM R F +
Sbjct: 723 NAVKADEFLSNMLLKGIVPDGITYNTLIN---------------GFIKEENMDRAFALVN 767
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
K N +G + D +++ FS+ +++E
Sbjct: 768 KMEN----SGLLPDVITYNVILNGFSRQGRMQE 796
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 146/336 (43%), Gaps = 25/336 (7%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMY 63
L Y+ MK+AG+ D+ Y ++ F + G ++ KV LE + LD+ Y
Sbjct: 518 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE-QGCXLDVV-----TY 571
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ + L K E + F +M E+G+ D + +LI + + A LF+ +
Sbjct: 572 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQ 631
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + D+ + L+ + + +EK E+ M + + + +++NG+
Sbjct: 632 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 691
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +++++++ +G +T +I+ YCR G KA++ M KG + Y++++
Sbjct: 692 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 751
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------- 290
+ K + A LV KM+ G P+V YN +++ R +++ E
Sbjct: 752 GFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP 811
Query: 291 ---KYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
YT++I+ + + ++E G V D
Sbjct: 812 DRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 3/202 (1%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
A+EI ++++ G+ + +I + +++ + + EEKG+ D+ +
Sbjct: 342 AWEI---YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 398
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
L+ Y +G++E+ E+++SM L I+NG K Y A V ++++ G
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 458
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
P TY ++ CR AE++F EM +G +V++S+++ + K G + A+
Sbjct: 459 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 518
Query: 256 RLVAKMKPKGCEPNVWIYNSLM 277
+ MK G P+ IY L+
Sbjct: 519 KYFRDMKNAGLAPDNVIYTILI 540
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 113/259 (43%), Gaps = 16/259 (6%)
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+P V+ L+ ++ +++ E F+ + KG+ + L+ ++ G V+ E+
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ + + + ++ +++N K + + +G P VTY ++INAYCR
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
GL +A ++ M KG CV Y++++ KTG+ A ++ +M G P+ Y
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 466
Query: 274 NSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRM 317
N L+ R N+ E+ ++ +I + D +K++ + +
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 526
Query: 318 NGGVIDRAMAGIMVGVFSK 336
G D + I++G F +
Sbjct: 527 AGLAPDNVIYTILIGGFCR 545
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/312 (17%), Positives = 141/312 (45%), Gaps = 3/312 (0%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +KS G+ + ++ K+G + ++ E + + + + I+ ++
Sbjct: 311 FRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQV---NVYTLNIMINA 367
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ + F DM+EKG+ D Y +LI ++ ++ A EL KG+
Sbjct: 368 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 427
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ + G + V++ M ++ +++ + A ++++
Sbjct: 428 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 487
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ SQG +P V+++++I + G +A K F +M+ G V Y+ ++ + + G
Sbjct: 488 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 547
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
+ +A+++ +M +GC +V YN++++ + K L + ++ T ++ + +F
Sbjct: 548 VMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFT 607
Query: 310 KFYNEFRMNGGV 321
N + +G +
Sbjct: 608 TLINGYXKDGNM 619
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 7/232 (3%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + +E M + D Y +++ F K + EKV L+ + SR++ H
Sbjct: 618 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI----YPNH 673
Query: 62 M-YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y IL + G E + + +M EKG +++ + A+E
Sbjct: 674 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 733
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRR 179
KG++ D + L+ +I+E +++ +V M+N+ L + D I+ VI+NGFS++
Sbjct: 734 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL-LPDVITYNVILNGFSRQG 792
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A + ++I +G P + TY S+IN + +A +V EM Q+GF
Sbjct: 793 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 844
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 131/274 (47%), Gaps = 5/274 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G LD Y ++ G+ + AL + + + + P + ++Y +L + L K
Sbjct: 406 MTEKGHPLDLVAYGALVHGLVAAGEVD--VALTVRDKMVERGVLPDA-NVYNVLMNGLCK 462
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR +M + + D V A+L+ F ++ A++LF+ KGM +
Sbjct: 463 KGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVG 522
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ Y + GM+ L V+ MK+ + + + I++G+ K+ A+K++ Q++
Sbjct: 523 YNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMV 582
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
Q C P VTY S+IN +CR G S+AEK F EM+ G VV Y+ ++ + K G+I
Sbjct: 583 KQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKIS 642
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
A M C PN +N L++ G NL
Sbjct: 643 KACSFFELMLLNRCIPNDVTFNYLIN--GLTNNL 674
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 7/243 (2%)
Query: 52 KLDLTP---SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
K L+P S T + + C GK RAF++ F M EKG D Y +L+ +
Sbjct: 373 KRGLSPNKLSYTPLIHVYCKQ-GKCLRAFDL---FIGMTEKGHPLDLVAYGALVHGLVAA 428
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
EV VA + + E+G+L D V+ L+ ++G + ++ M + L++ +S
Sbjct: 429 GEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVS 488
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+V+GF + A K++E I++G PG V Y ++I YC+ G+ + A M+
Sbjct: 489 ATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKD 548
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
YS+++ Y K + +A++L +M + C+PNV Y SL++ R + +
Sbjct: 549 GDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSR 608
Query: 289 LEK 291
EK
Sbjct: 609 AEK 611
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 159/384 (41%), Gaps = 54/384 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++++K G + + Y ++ K + + V L +E + R +D+ + +Y + D+
Sbjct: 263 FKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDV---NVQVYNSIVDA 319
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G E+ K R + E G D + Y +LI +V AEEL + A ++G+ +
Sbjct: 320 QIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPN 379
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ +Y ++G + ++ M + +V+G A+ V +
Sbjct: 380 KLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRD 439
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ--------------------- 228
+++ +G +P Y ++N C+ G S A+ + +EM
Sbjct: 440 KMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHG 499
Query: 229 --------------KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
KG D VV Y++M+ Y K G + DA+ V +MK P+ + Y+
Sbjct: 500 KLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYS 559
Query: 275 SLM-------DMHGRAKNLRQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMN 318
+++ D+H K Q+ K YT++I+ + + K + E R +
Sbjct: 560 TIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSS 619
Query: 319 GGVIDRAMAGIMVGVFSKLSQIEE 342
G + I++G F K +I +
Sbjct: 620 GLKPNVVTYTILIGCFCKEGKISK 643
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 6/219 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D K G F+++K KG L Y +I K + L E +
Sbjct: 243 YNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMK 302
Query: 123 EKGMLRDLEVFLKLVLMYIEEGM---VEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E+G+ +++V+ +V I+ G V KTL + + E +I+ +++G +
Sbjct: 303 ERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWI-TENGCEPDIT--TYNTLISGSCRDG 359
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A ++ E I +G P +++Y +I+ YC+ G +A +FI M +KG +VAY
Sbjct: 360 KVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYG 419
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++V G + A+ + KM +G P+ +YN LM+
Sbjct: 420 ALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMN 458
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 75 RAF-EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE-KGMLRDLEV 132
R F E+ MK K + + ++ ++ V A EL+ A + L D+
Sbjct: 113 RVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIA 172
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
L+ I++ VE +V E M + + C++V G K R K+
Sbjct: 173 CNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRW 232
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+GCIP V Y ++++ Y + G +A +F E++ KGF Y M+ K +
Sbjct: 233 GKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFK 292
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMD 278
L+ +MK +G + NV +YNS++D
Sbjct: 293 AVDGLLVEMKERGVDVNVQVYNSIVD 318
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 63/122 (51%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+V+G+ KR A ++++L +G +P TY +IN C+ + + + +EM+++
Sbjct: 245 TLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKER 304
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G D V Y+S+V K G + + + + GCEP++ YN+L+ R + +
Sbjct: 305 GVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEA 364
Query: 290 EK 291
E+
Sbjct: 365 EE 366
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 25/247 (10%)
Query: 46 LECESRKLDLTPSSTHM-YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICS 104
L C R D S Y + D K LK F M ++ + Y SLI
Sbjct: 540 LTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLING 599
Query: 105 FASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS 164
F + AE+ F+E G+ ++ + L+ + +EG + K E M +
Sbjct: 600 FCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPN 659
Query: 165 DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI 224
D ++NG + A + K E L + AS++ + F
Sbjct: 660 DVTFNYLINGLTNNLATAVSNKANESLEIK---------ASLMMDF------------FR 698
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHG 281
M G+++ V AY+S++ + A++L KM KG P+ + +L + + G
Sbjct: 699 TMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEG 758
Query: 282 RAKNLRQ 288
R+K +
Sbjct: 759 RSKEWKN 765
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 89/229 (38%), Gaps = 36/229 (15%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
I+ L K + E K D KG + + Y +L+ + +V+ A LFKE + K
Sbjct: 210 IMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMK 269
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G L E + +++NG K+ + A
Sbjct: 270 GFLPTTETY-----------------------------------GIMINGLCKKCNFKAV 294
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ +G Y SI++A + G + K + + G + + Y+++++
Sbjct: 295 DGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISG 354
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH-GRAKNLRQLEKY 292
+ G++ +A L+ +G PN Y L+ ++ + K LR + +
Sbjct: 355 SCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLF 403
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 113/217 (52%), Gaps = 1/217 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L K+GRA E + F DMK K D Y+ LI F + + +A LF +
Sbjct: 444 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 503
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++ +L D+ F LV Y G+V+ ++E M ++ + +V+GF K
Sbjct: 504 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMV 563
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +V +++ +GC P VTY ++I+A+CR G + A ++ EM G V+ Y S++
Sbjct: 564 EARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLI 623
Query: 243 AMYGKTGRIRDAMRLVAKM-KPKGCEPNVWIYNSLMD 278
+ TG + +A +++ ++ + + C+ +++ Y +MD
Sbjct: 624 GGFCGTGDLEEARKILERLERDENCKADMFAYRVMMD 660
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 5/275 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC-ESRKLDLTPSSTHMYKILCD 68
+EKM+ D + +M+ K GD + A LE E R + TP+ Y L D
Sbjct: 324 FEKMRENSCEPDVVTFTALMDGLCK-GDRLQEAQQVLETMEDR--NCTPNVI-TYSSLID 379
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K+G+ + + F+ M +GI + Y SLI F V A L +E G L
Sbjct: 380 GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLP 439
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ + G + + MK N ++ GF K A ++
Sbjct: 440 DIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLF 499
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ ++ Q +P VT+++++ YC GL AE++ EM V Y+S+V + K
Sbjct: 500 DDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKV 559
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
GR+ +A R++ +M +GC+PNV Y +L+D RA
Sbjct: 560 GRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 594
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 158/377 (41%), Gaps = 45/377 (11%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLT------------ 56
E+M+ +G V D+ Y ++ A K ++ K F +ECE + T
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRL 142
Query: 57 PSSTH---------------MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASL 101
P +T Y +L + K + ++MKE G+ + Y+++
Sbjct: 143 PEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTV 202
Query: 102 ICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
I F +V A +LF++ E G + +L + L+ G++++ E+++ M+ L
Sbjct: 203 IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 262
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
++ G K A+KV+E + C P V Y+++I C+ G +A K
Sbjct: 263 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACK 322
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+F +M++ + VV +++++ K R+++A +++ M+ + C PNV Y+SL+D
Sbjct: 323 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 382
Query: 282 RAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
+ +R ++ Y ++I + M D + E G + D
Sbjct: 383 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 442
Query: 326 MAGIMVGVFSKLSQIEE 342
++ K + E
Sbjct: 443 TYNTLIDGLCKTGRAPE 459
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 21/280 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L ++G E + +M+E+G+ D Y +L+ ++ +A ++F++
Sbjct: 234 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 293
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
D+ + L+ + G +++ ++ E M+ +++G K
Sbjct: 294 NGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 353
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +V E + + C P +TY+S+I+ C+ G A++VF M +G + VV Y+S++
Sbjct: 354 EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 413
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+ T + A+ L+ +M GC P++ YN+L+D G K R E
Sbjct: 414 HGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLID--GLCKTGRAPEA----------N 461
Query: 303 REF-DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
R F DM KF N D ++G F KL +I+
Sbjct: 462 RLFGDMKAKFCNP--------DVITYSCLIGGFCKLERID 493
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 1/229 (0%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E R+ L P Y L L K+G+ LK F D D Y++LI
Sbjct: 256 EMRERGLQPDK-FSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKA 314
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ A +LF++ E D+ F L+ + +++ +V+E+M++ +
Sbjct: 315 GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 374
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++G K A +V++++I +G P VTY S+I+ +C A + EM
Sbjct: 375 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 434
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G ++ Y++++ KTGR +A RL MK K C P+V Y+ L+
Sbjct: 435 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLI 483
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ + Y L ++L ++ R E ++ GI + YA +I ++ A EL
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E E G + D ++ ++ + K L+ SM+ E N+ ++++G K
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME-CEKNV--ITWTIMIDGLCKA 139
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A + ++ +G +P + TY +IN +C++ +A + EM++ G VV Y
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
S+++ + + ++ A +L +M GC PN+ YN+L+
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLL 238
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 115/221 (52%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L +S GK + + + + E + YA L+ ++ + + AE + E
Sbjct: 178 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 237
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G+ + V+ + ++ EK +EV + MK + +++N + K +
Sbjct: 238 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPM 297
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+++KV+ ++ S GC P TY +++NA+ R GL KAE+VF EMQQ G + V AY++++
Sbjct: 298 SSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 357
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y + G + A + + M+ GCEP+ YN L+D +GRA
Sbjct: 358 EAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRA 398
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 159/348 (45%), Gaps = 20/348 (5%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ GI ++ Y ++ K +EK ++ + K + ++T + ++ + G
Sbjct: 235 EMREHGIPPNATVYNAYLDGLLKARCTEKAVEVY---QRMKRERCRANTETFTLMINVYG 291
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+ + +K F +MK G + Y +L+ +FA + AEE+F+E ++ G D+
Sbjct: 292 KAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 351
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ Y G+ + E+ M++ ++V+ + + + A V+E+L
Sbjct: 352 AYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEEL 411
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+G P ++ ++ A+ R G ++ E+V ++ + G A ++M+ Y + GR+
Sbjct: 412 KQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRL 471
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE----------------KYTTV 295
D RL A M+ +G + +V YN ++ +GRA + ++E +T
Sbjct: 472 DDMERLFAAMERRG-DADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTAR 530
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ AY +E+ CV E G D A +++ S Q+E++
Sbjct: 531 MGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAACSDERQVEQV 578
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 136/304 (44%), Gaps = 8/304 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y + A V Y ++ A+ G + + E R+ + P++T +Y D
Sbjct: 198 YMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVI--SEMREHGIPPNAT-VYNAYLDG 254
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ + ++ ++ MK + + + +I + + + ++F E + G +
Sbjct: 255 LLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPN 314
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + LV + EG+ EK EV E M+ A ++ +S+ A +++
Sbjct: 315 ICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFS 374
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ GC P + +Y +++AY R GL+ AE VF E++Q+G + ++ ++A + ++G
Sbjct: 375 LMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSG 434
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
++A++ G P+ + N++++ + RA L +E+ M R D V
Sbjct: 435 NATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAA-----MERRGDADV 489
Query: 310 KFYN 313
YN
Sbjct: 490 GTYN 493
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 88/224 (39%), Gaps = 51/224 (22%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++ + K+R A +Y L+ C+P + TYA ++ AYC G +AE V EM++
Sbjct: 180 LLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREH 239
Query: 230 GFDKCVVAYSS-----------------------------------MVAMYGKTGRIRDA 254
G Y++ M+ +YGK + +
Sbjct: 240 GIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSS 299
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGR----------------AKNLRQLEKYTTVISA 298
M++ +MK GC+PN+ Y +L++ R A + + Y ++ A
Sbjct: 300 MKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEA 359
Query: 299 YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ A + ++ + G DRA I+V + + E+
Sbjct: 360 YSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHED 403
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 54/315 (17%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D G SG+ E+ + F +M EKGI D VY +I I K A LF E
Sbjct: 4 YTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELT 63
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
EKG++ ++ + L+ + G +E +V M+ L+++ I +++G+ KR
Sbjct: 64 EKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLID 123
Query: 183 AAVKV--------YEQ---------------------------LISQGCIPGQVTYASII 207
A KV +E +I +G +P V+Y ++I
Sbjct: 124 EAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLI 183
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
+ YC+ G + +A+K+F EM++ G + V Y+ ++ + K GR+++A L +M+ KG
Sbjct: 184 DIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIF 243
Query: 268 PNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
P+++ Y SL +HG + + D V+ +NE R G ++
Sbjct: 244 PDIYTYTSL--LHGEC-----------------IFGKLDDAVELFNEVRQKGLPLNVVTY 284
Query: 328 GIMVGVFSKLSQIEE 342
++ SK + EE
Sbjct: 285 TAIISGLSKEGRSEE 299
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 133/276 (48%), Gaps = 3/276 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N++ ++++ G+V + Y +++ K G+ E L E ++R LD+ +
Sbjct: 51 NTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDV---NQL 107
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L D K G E K M++KG D ++ + + + A+
Sbjct: 108 IYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTM 167
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
EKG++ ++ + L+ +Y +EG + ++ + MK A + V+++G SK+
Sbjct: 168 IEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRM 227
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++ +++ ++G P TY S+++ C G A ++F E++QKG VV Y+++
Sbjct: 228 KEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAI 287
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ K GR +A +L +M G P+ +Y SL+
Sbjct: 288 ISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLV 323
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G+V + Y +++ + K G+ + LF E +K P++ Y +L D K
Sbjct: 167 MIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEM--KKAGGEPNAV-TYNVLIDGHSK 223
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR E + +M+ KGI D Y SL+ ++ A ELF E +KG+ ++
Sbjct: 224 KGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVT 283
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+ ++ +EG E+ ++ + M A L D + +V+ K
Sbjct: 284 YTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHK 328
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D K G E K F++MK+ G + Y LI + +K A EL E
Sbjct: 179 YTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMR 238
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + L+ G ++ +E+ ++ L ++ I++G SK
Sbjct: 239 AKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSE 298
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINA 209
A K+Y+++ G P Y S++++
Sbjct: 299 EAFKLYDEMTEAGLTPDDRVYTSLVSS 325
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 166/346 (47%), Gaps = 24/346 (6%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y++ M S+GIV ++ Y +++ +G++ + + F +C K L P Y +
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTF-KCMLEK-GLIP-DIRAYSAIIH 634
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
SL K+G+ E + F + G++ D +Y SLI F +++ A +L+ E G+
Sbjct: 635 SLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINP 694
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKV 187
++ V+ L+ + G V K E+ + ++ +L + D ++ I++G+ K A K+
Sbjct: 695 NIVVYNTLINGLCKLGEVTKARELFDEIEEKDL-VPDVVTYSTIIDGYCKSGNLTEAFKL 753
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++++IS+G P Y +I+ + G KA +F E QQK + A++S++ + K
Sbjct: 754 FDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS-LSAFNSLIDSFCK 812
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
G++ +A L M K PN+ Y L+D +G+A+ + + E+
Sbjct: 813 HGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLT 872
Query: 292 YTTVISAYN-MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
YT+++ +YN + F M + + + G D G+M + K
Sbjct: 873 YTSLLLSYNQIGNRFKM-ISLFKDMEARGIACDAIAYGVMASAYCK 917
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 4/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M GI + Y ++ K+G+ K LF E E + DL P Y + D
Sbjct: 684 YDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK--DLVPDVV-TYSTIIDG 740
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KSG E K F +M KGI D +Y LI ++ A LF EA++K +
Sbjct: 741 YCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGS 799
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L F L+ + + G V + E+ + M + +L + ++++ + K A +++
Sbjct: 800 LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFL 859
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ ++ IP +TY S++ +Y +IG K +F +M+ +G +AY M + Y K G
Sbjct: 860 DMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 919
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ +A++L+ K +G + ++++L+
Sbjct: 920 KSLEALKLLNKSLVEGIKLEDDVFDALI 947
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 4/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y M A IV D Y +++A K+GD K + E E + Y
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE----CKPNLFTYNAFIGG 285
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++G E L+ + M EKG+ D Y L+ F K A+ +F+ G+ +
Sbjct: 286 LCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPN 345
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ +I+EG +E+ L + + M L ++ ++ G +K A+ ++
Sbjct: 346 RFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFN 405
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ G P TY +I+ Y + +KA ++ EM+ + YS +++ +
Sbjct: 406 EMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSS 465
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ A ++ +M G +PNV++Y +L+
Sbjct: 466 DLQKANEVLDQMIRNGVKPNVFMYGTLI 493
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
K + M E I+ D Y ++I + + +V + + E E K +L + +
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGL 286
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G V++ LEV + M L ++V+GF K++ A ++E + S G P +
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
TY ++I+ + + G +A ++ EM +G VV Y++M+ K G + AM L +
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNL 286
M G EP+ W YN L+D + ++ ++
Sbjct: 407 MLMAGLEPDTWTYNLLIDGYLKSHDM 432
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 3/280 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G+ D Y +++ F K S++ +F S L+ + Y L D K
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLN---PNRFTYTALIDGFIK 358
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G E L+ +M +G+ + Y ++I A E+ A LF E G+ D
Sbjct: 359 EGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWT 418
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ Y++ + K E++ MK +L S V+++G A +V +Q+I
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI 478
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P Y ++I AY + Y A ++ M G + Y+ ++ + ++
Sbjct: 479 RNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+A L+ M KG +PN Y + ++++ ++ ++ E+Y
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 119/276 (43%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M S+G+ + Y +++ F K G+ E+ + E +R L L + Y +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT---YNAMIGG 390
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K+G + + F +M G+ D Y LI + ++ A EL E + + +
Sbjct: 391 IAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPS 450
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ ++K EV++ M + + + ++ + + Y A+++ +
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I+ G +P Y +I CR +A+ + ++M +KG Y + + +Y K+G
Sbjct: 511 IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG 570
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
I+ A R M G PN IY L+ H N
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++A+ K E+ LFL+ E+R ++ P+ T Y L S + G F+++ F+
Sbjct: 838 YTILIDAYGKAEMMEEAEQLFLDMETR--NIIPN-TLTYTSLLLSYNQIGNRFKMISLFK 894
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
DM+ +GI D Y + ++ + A +L ++ +G+ + +VF L+ +E
Sbjct: 895 DMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEK 954
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ LE++ M EL++S ++ GF K A KV + G +P ++
Sbjct: 955 QISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 1014
Query: 205 SIINA 209
I+
Sbjct: 1015 DSIST 1019
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 115/281 (40%), Gaps = 37/281 (13%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC------------- 48
N +++M S GI D YC +++ K G+ EK +LF E
Sbjct: 746 NLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNS 805
Query: 49 ------------ESRKL-------DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEK 89
E+R+L LTP+ Y IL D+ GK+ E + F DM+ +
Sbjct: 806 LIDSFCKHGKVIEARELFDDMVDKKLTPNIV-TYTILIDAYGKAEMMEEAEQLFLDMETR 864
Query: 90 GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKT 149
I+ + Y SL+ S+ I LFK+ E +G+ D + + Y +EG +
Sbjct: 865 NIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEA 924
Query: 150 LEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
L+++ + + D + ++ K + +++ ++ + T +++
Sbjct: 925 LKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLG 984
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + G +A KV MQ+ G+ ++ + ++ TGR
Sbjct: 985 FYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS----TGR 1021
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 9/288 (3%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++++M+ + D + ++ + G E LF E +R+++ Y L D
Sbjct: 326 FFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIE---QDVFSYNTLLD 382
Query: 69 SLGKSGR---AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
++ K G+ AFEIL M K I+ + Y+++I FA A LF E
Sbjct: 383 AICKGGQMDLAFEILA---QMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLN 439
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D + L+ +Y + G E+ L+++ M + + ++ G+ K+ Y
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
KV+ ++ + +P +TY+++I+ Y + GLY +A +VF E + G VV YS+++
Sbjct: 500 KVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDAL 559
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYT 293
K G + A+ L+ +M +G PNV YNS++D GR+ + + Y+
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYS 607
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 129/263 (49%), Gaps = 8/263 (3%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAF-EILKF 82
+ ++ A+ + G E+ ++F ++ L P+ Y + D+ GK G F ++ KF
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSM--KEYGLRPNLV-TYNAVIDACGKGGMEFKQVAKF 326
Query: 83 FRDMKEKGILEDPSVYASL--ICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
F +M+ + D + SL +CS + E A LF E + + +D+ + L+
Sbjct: 327 FDEMQRNCVQPDRITFNSLLAVCSRGGLWEA--ARNLFDEMSNRRIEQDVFSYNTLLDAI 384
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G ++ E++ M + + +++GF+K + A+ ++ ++ +
Sbjct: 385 CKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDR 444
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
V+Y ++++ Y ++G +A + EM G K VV Y++++ YGK G+ + ++ A+
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAE 504
Query: 261 MKPKGCEPNVWIYNSLMDMHGRA 283
MK + PN+ Y++L+D + +
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKG 527
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 143/341 (41%), Gaps = 27/341 (7%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
SK+H+ + S + A GD E +L L ES+ L S Y
Sbjct: 146 SKMHFGRPKTTMATRHSSAAEDALQNAIDFSGDDEMFHSLMLSFESK---LCGSDDCTYI 202
Query: 65 ILCDSLGKSGRAFEILKF--FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
I LG G + + F F +E+ E + +++I + +V +A+ +F+ A
Sbjct: 203 I--RELGNRGECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAF 260
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G + F L+ Y G+ E+ + V SMK L + +++ K +
Sbjct: 261 SGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEF 320
Query: 183 AAVKVYEQLISQGCI-PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
V + + + C+ P ++T+ S++ R GL+ A +F EM + ++ V +Y+++
Sbjct: 321 KQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTL 380
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ K G++ A ++A+M K PNV Y +TVI +
Sbjct: 381 LDAICKGGQMDLAFEILAQMPAKRIMPNVVSY-------------------STVIDGFAK 421
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
A FD + + E R +DR ++ +++K+ + EE
Sbjct: 422 AGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEE 462
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 130/331 (39%), Gaps = 65/331 (19%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYK 64
L+ + +M+ I LD Y ++ + K+G SE+ + E S K D+ Y
Sbjct: 429 LNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV-----TYN 483
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L GK G+ E+ K F +MK + +L + Y++LI ++ K A E+F+E +
Sbjct: 484 ALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSA 543
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-----RR 179
G+ D+ ++ L+ + G+V + +++ M ++ + I++ F + R
Sbjct: 544 GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERS 603
Query: 180 AYWA----------------------AVKVYEQLISQG----------------CI---- 197
A ++ ++++ QL S+G CI
Sbjct: 604 ADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVF 663
Query: 198 ---------PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
P VT+++I+NA R + A + E++ FD V + M +
Sbjct: 664 RKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRL--FDNKVYGVVHGLLMGQRE 721
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
A L K+ YN+L DM
Sbjct: 722 NVWLQAQSLFDKVNEMDGSTASAFYNALTDM 752
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 130/270 (48%), Gaps = 8/270 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMYKILCD 68
+++M S V+ G ++ + +G+ E L + +R ++ + T + +LCD
Sbjct: 285 FDEMASPPDVVTYGI---LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCD 341
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
GR + L DM ++ D +VY +++ F + ++ A F E + KG+
Sbjct: 342 K----GRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLAT 397
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ G +++ +V++ M L++ + V+V+G+ KR A +V+
Sbjct: 398 DGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVH 457
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ +G P VTY ++ + C+ G A ++ EM KG + Y+S++ K
Sbjct: 458 NTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKA 517
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G + AMR +A M G +P+V+ Y +L+D
Sbjct: 518 GYLDQAMRTMADMDAAGLKPDVYTYTTLID 547
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 140/293 (47%), Gaps = 20/293 (6%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL L +GR + + F +M D Y LI + ++ E++ A +L +
Sbjct: 265 YNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMV 321
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G+ + V+ +V + ++G V L VVE M + ++ + + + +++GF +
Sbjct: 322 ARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLV 381
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+A + ++++ +G VTY ++IN CR G +AEKV EM + D V Y+ +V
Sbjct: 382 SARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLV 441
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
Y K G++ +A ++ M +G PNV Y +L D + +++ + +S N
Sbjct: 442 DGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMS--NKG 499
Query: 303 REFDMCVKFYNEFRMNG----GVIDRAM--------AGIMVGVFSKLSQIEEL 343
E + C YN +NG G +D+AM AG+ V++ + I+ L
Sbjct: 500 LELNACT--YNSL-INGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 131/320 (40%), Gaps = 19/320 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M ++LD Y ++ F GD F E + + L + Y L + L
Sbjct: 353 EDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGL---ATDGVTYTTLINGL 409
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G E K ++M + + D Y L+ + ++ A ++ ++G+ ++
Sbjct: 410 CRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNV 469
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L ++G V+ E++ M N L ++ C ++NG K A++
Sbjct: 470 VTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMAD 529
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + G P TY ++I+A C+ G +A + EM G +V Y+ ++ + +GR
Sbjct: 530 MDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGR 589
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL------------RQLEK----YTT 294
+ +L+ M K PN YNSLM + N+ R +E Y
Sbjct: 590 VEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNI 649
Query: 295 VISAYNMAREFDMCVKFYNE 314
+I + AR F+NE
Sbjct: 650 LIKGHCKARSMKEAQYFHNE 669
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/349 (18%), Positives = 130/349 (37%), Gaps = 75/349 (21%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++++M+ G+ D Y ++ + G+ ++ + E +R+LD+ + Y +L D
Sbjct: 386 WFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVT---YTVLVD 442
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM-- 126
K G+ E + M ++G+ + Y +L +V+ A EL E KG+
Sbjct: 443 GYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLEL 502
Query: 127 ---------------------LR------------DLEVFLKLVLMYIEEGMVEKTLEVV 153
+R D+ + L+ + G +++ +++
Sbjct: 503 NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLL 562
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ M + + + V++NGF K+ E ++ + P TY S++ YC I
Sbjct: 563 QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYC-I 621
Query: 214 GLYSK------------------------------------AEKVFIEMQQKGFDKCVVA 237
G K A+ EM +KGF +
Sbjct: 622 GNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASS 681
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
YS+++ + K + +A +L M+ +G +YN +D + NL
Sbjct: 682 YSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNL 730
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 151/317 (47%), Gaps = 8/317 (2%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK I+ D Y I+ K EK L +E E + P+S Y IL D L K
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCE--PNS-FTYCILMDGLCK 57
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR E ++ +MK KG+ D VY++LI F S + + LF E EKG+ ++ V
Sbjct: 58 EGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVV 117
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + ++G+ + V+ +M + ++ G K A+ +++ +
Sbjct: 118 YSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMT 177
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P VTY +IN C+ G A K+F M +KG VV+Y++++ G++
Sbjct: 178 EKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLD 237
Query: 253 DAMRLVAKMKPKG--CEPNVWIYNSLMDMHGRAKNL-RQLEKYTTVISAYNMAREFDMCV 309
+AM+L + + G EP+V +N+++ + L + +E Y T+I + F C
Sbjct: 238 EAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLF-TCH 296
Query: 310 KFYNEFRMNGGVIDRAM 326
E+ + G+ID+AM
Sbjct: 297 ILIGEY-IKSGIIDKAM 312
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 11/259 (4%)
Query: 35 IGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
IGD+ K+ LE + ++L++ Y L L +G+ E +K F + E G +
Sbjct: 201 IGDAFKIFETMLE-KGKRLEVVS-----YNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVE 254
Query: 95 PSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
P V + ++I + A E++ E+G +L L+ YI+ G+++K +E+
Sbjct: 255 PDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMEL 314
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ + L S V+++GF K A ++ ++ G P Y +++ + C+
Sbjct: 315 WKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCK 374
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
+A ++F EM++ + ++++ M+ K G I A L+ M+ G P+ +
Sbjct: 375 ESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYT 434
Query: 273 YNSLMDMHGRAKNLRQLEK 291
Y+S ++ R L Q+E+
Sbjct: 435 YSSFIN---RLSKLGQMEE 450
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 149/385 (38%), Gaps = 58/385 (15%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS------------- 58
+MK G+ +D Y ++ F G ++ ALF E + ++P+
Sbjct: 70 EMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKG--ISPNVVVYSCLINGFCK 127
Query: 59 ---------------------STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS- 96
+ Y + L K GRA + L F M EKG E+PS
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG--EEPST 185
Query: 97 -VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
Y LI + A ++F+ EKG ++ + L++ G +++ +++ S
Sbjct: 186 VTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSS 245
Query: 156 -MKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+++ D I+ ++ G K AV++Y+ +I +G T +I Y +
Sbjct: 246 LLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKS 305
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G+ KA +++ + + G YS M+ + K + A L ++MK G P ++ Y
Sbjct: 306 GIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDY 365
Query: 274 NSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRM 317
N+LM + +L Q + + +I A + + N+ +
Sbjct: 366 NTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQ 425
Query: 318 NGGVIDRAMAGIMVGVFSKLSQIEE 342
G D + SKL Q+EE
Sbjct: 426 MGLTPDAYTYSSFINRLSKLGQMEE 450
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 91/206 (44%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
KSG + ++ ++ + + G++ + Y+ +I F + + A+ LF + G+ L
Sbjct: 304 KSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLF 363
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ +E +E+ + + MK + ++++G K +A ++ +
Sbjct: 364 DYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM 423
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
G P TY+S IN ++G +A+ F M G Y S++ +G I
Sbjct: 424 QQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEI 483
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ + L+ +M G ++ I NS++
Sbjct: 484 EEVINLLRQMADMGVILDLEITNSIL 509
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 167/368 (45%), Gaps = 30/368 (8%)
Query: 3 SQSKLHYYE----KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS 58
+ +LH E +M+ G+ + Y ++ K SEK ++ + K + +
Sbjct: 212 NSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVY---QRMKKERCRT 268
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+T Y ++ + GK+ + LK F +MK G + Y +L+ +FA + AEE+F
Sbjct: 269 NTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVF 328
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E ++ G D+ + L+ Y G+ + E+ M++ ++V+ + +
Sbjct: 329 EEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRA 388
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A +++L QG P ++ +++A+ + G ++ E+V ++ + G A
Sbjct: 389 GLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFAL 448
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMK-------PKGCEPNVWIYNSLMDMHGRAKNLRQLE- 290
++M+ YG+ GR+ D RL+ M+ G P+ YN L++++GRA L ++E
Sbjct: 449 NAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEA 508
Query: 291 ---------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+T+ I AY +E+ C++ + E G D A +++ S
Sbjct: 509 AFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTAKVLLAACS 568
Query: 336 KLSQIEEL 343
Q+E++
Sbjct: 569 DERQVEQV 576
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 116/221 (52%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D+ G+ + + + + E + YA L+ ++ + ++ AE + E +
Sbjct: 168 YNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQ 227
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G+ V+ + ++ EK +EV + MK + +++N + K +
Sbjct: 228 KNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPM 287
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+++KV+ ++ + GC P TY +++NA+ R GL KAE+VF EMQQ G + V AY++++
Sbjct: 288 SSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 347
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y + G + A + + M+ GCEP+ YN L+D +GRA
Sbjct: 348 EAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRA 388
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 131/282 (46%), Gaps = 3/282 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y + A V Y ++ A+ G + + E + L P + +Y D
Sbjct: 188 YMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQKNGL---PPTATVYNAYLDG 244
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ + + ++ ++ MK++ + Y +I + + + ++F E + G +
Sbjct: 245 LLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPN 304
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + LV + EG+ EK EV E M+ A ++ +S+ A +++
Sbjct: 305 ICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFS 364
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ GC P + +Y +++AY R GL+ +AE F E++Q+G + ++ +++ + K+G
Sbjct: 365 LMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSG 424
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ ++A++ G P+ + N++++ +GRA L +E+
Sbjct: 425 NVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMER 466
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 51/224 (22%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++++ + ++R A +Y L+ C+P + TYA ++ AYC G +AE V EMQ+
Sbjct: 170 LLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQKN 229
Query: 230 GFDKCVVAYSS-----------------------------------MVAMYGKTGRIRDA 254
G Y++ M+ +YGK + +
Sbjct: 230 GLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSS 289
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGR----------------AKNLRQLEKYTTVISA 298
+++ +MK GC+PN+ Y +L++ R A + + Y ++ A
Sbjct: 290 LKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEA 349
Query: 299 YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ A + ++ G DRA I+V + + +E
Sbjct: 350 YSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQE 393
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 133/279 (47%), Gaps = 3/279 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G++ D + ++ + G + F E E + + P + +Y IL D
Sbjct: 385 FDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREME--RSGIVPDNV-IYTILIDG 441
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++G + LK +M +G D Y + + A+ LF E E+GM+ D
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F L+ Y ++G ++K L + E+M L +++GF K A ++++
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I + IP ++Y +++N +C GL +A + +M +KG +V ++++ Y ++G
Sbjct: 562 DMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ A ++KM G P+ + YN+L+D + + NL +
Sbjct: 622 DMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 142/291 (48%), Gaps = 13/291 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTH 61
++ + + M+ G+ D Y ++ A+ + G E+ L SR ++ L +
Sbjct: 274 ENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAI 333
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y LC +GK RA ++L +M + G+ + + Y +L+ + A+E+F E
Sbjct: 334 LYG-LC-KIGKYDRAKDVLI---EMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+L DL F L+ + G + + L M+ + + + I ++++GF + A
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGAL 448
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+K+ ++++++GC VTY + +N C+ +++ A+ +F EM ++G ++++
Sbjct: 449 SDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTL 508
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH------GRAKNL 286
+ Y K G + A+ L M +P+ YN+L+D GRAK L
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 105/220 (47%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ + I+ ++L K + ++ F DM+ KG+ D Y +LI ++ V+ A +L
Sbjct: 256 NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+GM L + ++ + G ++ +V+ M L + ++ +R
Sbjct: 316 NSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR 375
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A ++++++ +G +P V+++S+I R G +A F EM++ G V Y
Sbjct: 376 DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ ++ + + G + DA+++ +M +GC +V YN+ ++
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLN 475
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 101/227 (44%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L + ++ + E + F+ ++ KG+ + L+ V +A E++ E
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G+ ++ +V ++ E + + M+ + ++N + +
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++ S+G PG +TY +I+ C+IG Y +A+ V IEM Q G Y+++
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ + I +A + +M +G P++ ++SL+ + R +L Q
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQ 415
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 133/279 (47%), Gaps = 3/279 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G++ D + ++ + G + F E E + + P + +Y IL D
Sbjct: 385 FDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREME--RSGIVPDNV-IYTILIDG 441
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++G + LK +M +G D Y + + A+ LF E E+GM+ D
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F L+ Y ++G ++K L + E+M L +++GF K A ++++
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I + IP ++Y +++N +C GL +A + +M +KG +V ++++ Y ++G
Sbjct: 562 DMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ A ++KM G P+ + YN+L+D + + NL +
Sbjct: 622 DMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 142/291 (48%), Gaps = 13/291 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTH 61
++ + + M+ G+ D Y ++ A+ + G E+ L SR ++ L +
Sbjct: 274 ENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAI 333
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y LC +GK RA ++L +M + G+ + + Y +L+ + A+E+F E
Sbjct: 334 LYG-LC-KIGKYDRAKDVLI---EMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+L DL F L+ + G + + L M+ + + + I ++++GF + A
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGAL 448
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+K+ ++++++GC VTY + +N C+ +++ A+ +F EM ++G ++++
Sbjct: 449 SDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTL 508
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH------GRAKNL 286
+ Y K G + A+ L M +P+ YN+L+D GRAK L
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 105/220 (47%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ + I+ ++L K + ++ F DM+ KG+ D Y +LI ++ V+ A +L
Sbjct: 256 NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+GM L + ++ + G ++ +V+ M L + ++ +R
Sbjct: 316 NSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR 375
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A ++++++ +G +P V+++S+I R G +A F EM++ G V Y
Sbjct: 376 DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ ++ + + G + DA+++ +M +GC +V YN+ ++
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLN 475
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 101/227 (44%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L + ++ + E + F+ ++ KG+ + L+ V +A E++ E
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G+ ++ +V ++ E + + M+ + ++N + +
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++ S+G PG +TY +I+ C+IG Y +A+ V IEM Q G Y+++
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ + I +A + +M +G P++ ++SL+ + R +L Q
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQ 415
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 115/221 (52%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L +S GK + + + + E + YA L+ ++ + + AE + E
Sbjct: 321 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 380
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G+ + V+ + ++ EK +EV + MK + +++N + K +
Sbjct: 381 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPM 440
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+++KV+ ++ S GC P TY +++NA+ R GL KAE+VF EMQQ G + V AY++++
Sbjct: 441 SSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALM 500
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y + G + A + + M+ GCEP+ YN L+D +GRA
Sbjct: 501 EAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRA 541
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 160/348 (45%), Gaps = 20/348 (5%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ GI ++ Y ++ K +EK ++ + K + ++T + ++ + G
Sbjct: 378 EMREHGIPPNATVYNAYLDGLLKARCTEKAVEVY---QRMKRERCRANTETFTLMINVYG 434
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+ + +K F +MK G + Y +L+ +FA + AEE+F+E ++ G D+
Sbjct: 435 KAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 494
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ Y G+ + E+ M++ ++V+ + + + A V+E+L
Sbjct: 495 AYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEEL 554
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+G P ++ ++ A+ R G ++ E+V ++ + G A ++M+ Y + GR+
Sbjct: 555 KQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRL 614
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE----------------KYTTV 295
D RL+A M+ +G + +V YN ++ +GRA + ++E +T
Sbjct: 615 DDMERLLAAMERRG-DADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTAR 673
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ AY +E+ CV E G D A +++ S Q+E++
Sbjct: 674 MGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAACSDERQVEQV 721
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 88/224 (39%), Gaps = 51/224 (22%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++ + K+R A +Y L+ C+P + TYA ++ AYC G +AE V EM++
Sbjct: 323 LLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREH 382
Query: 230 GFDKCVVAYSS-----------------------------------MVAMYGKTGRIRDA 254
G Y++ M+ +YGK + +
Sbjct: 383 GIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSS 442
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGR----------------AKNLRQLEKYTTVISA 298
M++ +MK GC+PN+ Y +L++ R A + + Y ++ A
Sbjct: 443 MKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEA 502
Query: 299 YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ A + ++ + G DRA I+V + + E+
Sbjct: 503 YSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHED 546
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM--YKILC 67
++ M + G D Y I+ KIG++ A LF RK+ + Y +
Sbjct: 215 FDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLF-----RKMGEAGCQPDVVTYSTII 269
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
DSL K R E L F MK KGI + Y SLI + + + A + E ++
Sbjct: 270 DSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIM 329
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ F L+ ++ +EG V + V+++M + + ++NG+S + A K+
Sbjct: 330 PNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKL 389
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ +I++GC P +Y +IN YC+ +A+++F EM +G +V+Y++++ +
Sbjct: 390 FDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQ 449
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR+R+A L M G P++ Y+ L+D
Sbjct: 450 LGRLREAHDLFKNMLTNGNLPDLCTYSILLD 480
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 149/335 (44%), Gaps = 19/335 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + MK+ GI + Y +++ + +A+ E S L++ P+ + +L
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS--LNIMPNIV-TFSLL 338
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ K G FE + M E G+ + Y+SL+ ++ AEV A +LF KG
Sbjct: 339 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGC 398
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ Y + + + ++ M + L +++G + A
Sbjct: 399 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD 458
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ +++ G +P TY+ +++ +C+ G +KA ++F MQ +V Y+ ++
Sbjct: 459 LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMC 518
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------MHGRAKNLRQLEK-------- 291
K+ +++A +L +++ +G +PNV IY ++++ + + R +E+
Sbjct: 519 KSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEF 578
Query: 292 -YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
Y +I + ++ V+ E R G V D A
Sbjct: 579 SYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVA 613
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%)
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L K+ E G+ D L+ + + V+ V+ + L ++ ++NG
Sbjct: 144 LSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLC 203
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K + AV++++ ++++G P TY +IIN C+IG A +F +M + G VV
Sbjct: 204 KVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVV 263
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
YS+++ K R+ +A+ + + MK KG PN++ YNSL+
Sbjct: 264 TYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLI 304
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 91/208 (43%)
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
++ + M+ G+ D LI F + V + + + + G+ + F L+
Sbjct: 141 VISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLIN 200
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
+ G + +E+ + M I+NG K AA ++ ++ GC P
Sbjct: 201 GLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQP 260
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
VTY++II++ C+ ++A +F M+ KG + Y+S++ R R+A ++
Sbjct: 261 DVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAML 320
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+M PN+ ++ L+++ + N+
Sbjct: 321 NEMMSLNIMPNIVTFSLLINIFCKEGNV 348
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 154/353 (43%), Gaps = 22/353 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M G+ ++ Y ++ + IG ++V + E + L ++Y +L D
Sbjct: 225 FQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQ---PDCYIYAVLLDY 281
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+GR E F + KGI + ++Y L+ +A+ + G+ D
Sbjct: 282 LCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPD 341
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+F + Y ++ M+++ + + + M+ L+ + +++ K AV +
Sbjct: 342 HHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFN 401
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+I +G P ++S++ C + + KAE++F E+ +G V +++++ + G
Sbjct: 402 QMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREG 461
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQL-------------EKYT 293
R+ +A RL+ M G P+V YN+L+D H GR +L Y
Sbjct: 462 RVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYN 521
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAG-IMVGVF--SKLSQIEEL 343
T++ Y AR D + E M G D I+ G+F + S+ +EL
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 574
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 101/222 (45%), Gaps = 1/222 (0%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP+ Y + D L K+ F+ M +KG+ + Y LI + SI + K
Sbjct: 199 TPNVV-TYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVV 257
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
++ +E G+ D ++ L+ + G + + +S+ + + I ++++G+
Sbjct: 258 QMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGY 317
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+ + + ++ G P + + AY + + +A +F +M+Q+ +
Sbjct: 318 ATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNI 377
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V Y +++ K GR+ DA+ +M +G P++++++SL+
Sbjct: 378 VTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLV 419
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 126/314 (40%), Gaps = 32/314 (10%)
Query: 38 SEKVAALF----LECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGI-L 92
SE V +LF EC + + PSS Y IL + GR F + + G +
Sbjct: 70 SELVVSLFNRMIRECS---IKVAPSS-FTYTILIGCFCRMGRLKHGFAAFGLILKTGWRV 125
Query: 93 EDPSVYASLICSFASIAEVKVAEE-LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D +++ L+ V A + L + E G D+ + L+ + E E+ LE
Sbjct: 126 NDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALE 185
Query: 152 VVESMKN---AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
++ M + + +++G K + A V++ +I +G P TY +I+
Sbjct: 186 LLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIH 245
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
Y IG + + ++ EM G Y+ ++ K GR +A + + KG +P
Sbjct: 246 GYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKP 305
Query: 269 NVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAG 328
NV IY L +HG Y T S M D+ V NG D +
Sbjct: 306 NVTIYGIL--LHG----------YATEGSLSEMHSFLDLMVG-------NGVSPDHHIFN 346
Query: 329 IMVGVFSKLSQIEE 342
IM ++K + I+E
Sbjct: 347 IMFCAYAKKAMIDE 360
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 144/339 (42%), Gaps = 41/339 (12%)
Query: 3 SQSKLH-YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
S S++H + + M G+ D + + A+ K ++ +F + ++L +P+
Sbjct: 322 SLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRL--SPNIV- 378
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D+L K GR + + F M ++G+ D V++SL+ ++ + + AEELF E
Sbjct: 379 TYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEV 438
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS--------CV--- 170
++G+ D F L+ EG V + +++ M + D IS C+
Sbjct: 439 LDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVR-PDVISYNTLVDGHCLTGR 497
Query: 171 -------------------------IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+++G+ K R A ++ +++ +G P VTY +
Sbjct: 498 IDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNT 557
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
I++ + G +S+A+++++ M + Y+ ++ K + +A ++ + K
Sbjct: 558 ILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKD 617
Query: 266 CEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
+ +++ N ++ + ISAY + +
Sbjct: 618 LQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPD 656
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 117/288 (40%), Gaps = 34/288 (11%)
Query: 23 GCYCQ-------------IMEAFYKIGDSEKVAALFLE-CESRKLD-------------- 54
GC+C+ I++ +++ D+ + L C+++++D
Sbjct: 100 GCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFG 159
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGI-LEDPSV--YASLICSFASIAEV 111
TP Y IL RA E L+ M + G P+V Y ++I V
Sbjct: 160 CTPD-VFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMV 218
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC-ISCV 170
A+ +F+ +KG+ + + L+ Y+ G ++ +++++ M L DC I V
Sbjct: 219 DRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQ-PDCYIYAV 277
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+++ K A +++ +I +G P Y +++ Y G S+ M G
Sbjct: 278 LLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNG 337
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ M Y K I +AM + KM+ + PN+ Y +L+D
Sbjct: 338 VSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALID 385
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 85/215 (39%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D +GR E K + G+ D Y +L+ + + A LF+E
Sbjct: 485 YNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREML 544
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + ++ + G + E+ SM N+ ++ +I+NG K
Sbjct: 545 MKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVD 604
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K++ L S+ T +I A + G A +F + G V Y +
Sbjct: 605 EAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIA 664
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G + + L + M+ G PN + N+L+
Sbjct: 665 ENLIKEGSLEELDELFSAMEENGTAPNSRMLNALV 699
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 9/276 (3%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMYKILCDSLGKSGR 75
G+V D YC +++ ++ G + + AL LD P T+ + + L K G
Sbjct: 496 GLVPDKITYCTLIDGLFRTGRAGQAEAL--------LDAMPDPDTYAFNCCINGLSKLGD 547
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
L+ + M E ++ D + LI + A LF+E K + D+ F
Sbjct: 548 VSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 607
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
L+ + G VE ++++ M N + + +V+G K A + E+++S G
Sbjct: 608 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 667
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C+P +TY S++ A CR A ++ E++ G+D V Y+ +V K+G+ A+
Sbjct: 668 CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAI 727
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
++ +M KG P+V YN+L+D +A +L + +
Sbjct: 728 TVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARR 763
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 114/234 (48%), Gaps = 6/234 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L DSL K+G E + DM + + + Y+ LI + + A EL +E
Sbjct: 254 YNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMT 313
Query: 123 EKG--MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS-DCIS-CVIVNGFSKR 178
K +L ++ + + ++ M + E++ S+++ L +S D ++ +++G K
Sbjct: 314 RKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC 373
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A V++ +I+ G +P +TY +++N C+ +A + M KG V+ Y
Sbjct: 374 GQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 433
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
S +V + K R+ +A+ L+ M +GC PNV +NS++D G K+ R E +
Sbjct: 434 SVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID--GLCKSDRSGEAF 485
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 130/285 (45%), Gaps = 10/285 (3%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
+ + L ++KS G D+ Y +++ +K G +E+ + E +
Sbjct: 686 SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHH---PDV 742
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEK---GILEDPSVYASLICSFASIAEVKVAEEL 117
Y L DSL K+G E + DM + + + Y+ LI + + A EL
Sbjct: 743 VTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEAREL 802
Query: 118 FKEAEEKG--MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS-DCIS-CVIVN 173
+E K +L ++ + + ++ M+ + E++ S+++ L +S D ++ +++
Sbjct: 803 IQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLID 862
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G K A V++ +I+ G +P VTY ++N C+ +A + M KG
Sbjct: 863 GLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTP 922
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V+ YS +V + K + +A+ L+ M +GC PNV +NS++D
Sbjct: 923 DVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIID 967
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 130/289 (44%), Gaps = 12/289 (4%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ E+M S+G V DS Y ++ A + ++ L E +S D T Y IL
Sbjct: 658 QFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD---PDTVTYNILV 714
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK--- 124
D L KSG+ + + +M KG D Y +LI S +++ A L + +
Sbjct: 715 DGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSR 774
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC--VIVNGFSKRRAYW 182
+ ++ + L+ + G +++ E+++ M ++ I ++G K+
Sbjct: 775 CCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMA 834
Query: 183 AAVKVYEQLISQGCI---PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A ++ L G + P VT++++I+ C+ G +A VF +M G+ VV Y+
Sbjct: 835 EACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYN 893
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
++ KT ++ A ++ M KG P+V Y+ L+D +A ++ +
Sbjct: 894 VLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDE 942
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
I+NG K A ++++E+L+ +G P VTY ++I++ C+ G +A ++ +M +
Sbjct: 221 TIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 280
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE--PNVWIYNSLMD 278
VV YS ++ K GRI +A L+ +M K C+ PN+ YNS +D
Sbjct: 281 SCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 331
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 126/301 (41%), Gaps = 14/301 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M S V + Y ++ K+G ++ L E + D+ P+ Y D
Sbjct: 274 HGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII-TYNSFLDG 332
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGML 127
L K E + R +++ + P +++LI ++ A +F + G +
Sbjct: 333 LCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYV 392
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ + LV + +E+ ++ESM + + V+V+ F K A+++
Sbjct: 393 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 452
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK-GFDKCVVAYSSMVAMYG 246
+ S+GC P VT+ SII+ C+ +A ++F +M K G + Y +++
Sbjct: 453 LHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLF 512
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
+TGR A L+ M +P+ + +N ++ L +L + + YN E +
Sbjct: 513 RTGRAGQAEALLDAMP----DPDTYAFNCCIN------GLSKLGDVSRALQVYNRMLELE 562
Query: 307 M 307
+
Sbjct: 563 L 563
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 113/260 (43%), Gaps = 11/260 (4%)
Query: 25 YCQIMEAFYKIG-DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
Y ++ A YK G D E+ F S + Y I+ SL ++G L+ F
Sbjct: 149 YSTLLRATYKAGGDVERTLGFFRRIRSSSRSVAD-----YNIVLQSLCRAGETARALEIF 203
Query: 84 R-DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
R +M G+ Y ++I E+ ELF+E E+G D+ + L+ +
Sbjct: 204 RGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCK 263
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC--IPGQ 200
G +E+ + M + + V++NG K A ++ +++ + C +P
Sbjct: 264 AGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNI 323
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMRLV 258
+TY S ++ C+ + ++A ++ ++ V +S+++ K G+I +A +
Sbjct: 324 ITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVF 383
Query: 259 AKMKPKGCEPNVWIYNSLMD 278
M G PNV YN+L++
Sbjct: 384 DDMIAGGYVPNVITYNALVN 403
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 107/253 (42%), Gaps = 8/253 (3%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ K+G ++ L E + D+ P+ Y D L K E + R
Sbjct: 783 YSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNII-TYNSFLDGLCKQSMMAEACELMR 841
Query: 85 DMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
+++ + P +++LI + A +F + G + ++ + L+ +
Sbjct: 842 SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCK 901
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
+E+ ++ESM + + V+V+ F K A+++ + S+GC P VT
Sbjct: 902 TDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVT 961
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQK-GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
+ SII+ C+ +A ++F +M K G + Y +++ +TG A L+ M
Sbjct: 962 FNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM 1021
Query: 262 KPKGCEPNVWIYN 274
+P+ + +N
Sbjct: 1022 P----DPDTYAFN 1030
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE-QLISQGCIP 198
Y G VE+TL ++++ +++D +++ + A++++ ++ G P
Sbjct: 157 YKAGGDVERTLGFFRRIRSSSRSVAD--YNIVLQSLCRAGETARALEIFRGEMARDGVAP 214
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
VTY +IIN C+ ++F E+ ++G VV Y++++ K G + +A RL
Sbjct: 215 TIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLH 274
Query: 259 AKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
M + C PNV Y+ L++ GR R+L
Sbjct: 275 GDMSSRSCVPNVVTYSVLINGLCKVGRIDEAREL 308
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 203 YASIINAYCRIGLYSKAEKVFI-EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
Y ++ + CR G ++A ++F EM + G +V Y++++ K+ + M L ++
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+G P+V YN+L+D +A +L + +
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARR 272
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 138/281 (49%), Gaps = 6/281 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M S GI L+ +C I+ + G++E F + ++ +L P +Y + +
Sbjct: 190 EEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAE--NLVPGGI-VYNSIVQAY 246
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G + M+E+G + +Y +++ FA I + + F + G+
Sbjct: 247 CQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTA 306
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V ++ + G + K L+++E M ++ + I +I++G+++ + AA KV+E
Sbjct: 307 ATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWED 366
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++S G P VTY +++A+C+ G KA V +Q + Y+S++ Y K G
Sbjct: 367 MVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGH 426
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
I+ A+ + ++K G P V YNSL+ +A RQ+E
Sbjct: 427 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKA---RQMEN 464
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 143/335 (42%), Gaps = 23/335 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M SAG+ D Y ++ AF K G +K + ++ +L T + Y + D
Sbjct: 364 WEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIET---YTSILDG 420
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G + L+ F +K G+ Y SL+ A +++ A + E G++ +
Sbjct: 421 YVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPN 480
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L Y G VEK + + MK L I ++ K A AV+V++
Sbjct: 481 ERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQ 540
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+ G ++TY ++++ + R G SKA + +MQ+ GF + Y+S + ++G
Sbjct: 541 QITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSG 600
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
+ +A M+ K E N YTT+I + A + D +
Sbjct: 601 DTEEVTETLAVMREKKLEVNA-------------------RTYTTLIHGWLAAADPDQAI 641
Query: 310 KFYNEFRMNGGVIDRAMAG-IMVGVFSKLSQIEEL 343
Y + + +G +D A++ ++ G+ S SQ L
Sbjct: 642 SCYEQAKASGLQLDSALSNCLLSGLISCASQNSTL 676
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/270 (18%), Positives = 116/270 (42%), Gaps = 18/270 (6%)
Query: 91 ILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
+++ P + Y L+ +A + A F+ + ++ ++ L+ Y E +E
Sbjct: 125 VIDKPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEG 184
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+ E M + + +++ + C I++G++ AA +E+ ++ +PG + Y SI+
Sbjct: 185 AVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQ 244
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
AYC+ G E + +M+++GF + Y++++ + + + ++K G P
Sbjct: 245 AYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSP 304
Query: 269 NVWIYNSLMDMHGRAKN-------LRQLEK---------YTTVISAYNMAREFDMCVKFY 312
Y ++ + +A N L +++K Y ++ Y +F K +
Sbjct: 305 TAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVW 364
Query: 313 NEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ G D I+V F K ++++
Sbjct: 365 EDMVSAGLKPDIVTYNILVHAFCKAGRMDK 394
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 131/311 (42%), Gaps = 19/311 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ + + GD A F E+ + + H+Y L + ++ +
Sbjct: 134 YGLLVDFYARHGDKVAARATF---EAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 190
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M +GI + +V+ S+I +AS + AE F++ + + ++ V+ +V Y + G
Sbjct: 191 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 250
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+E ++ M+ + + ++NGF++ R + + +L + G P TY
Sbjct: 251 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYG 310
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
I+ + + G +KA + EM + G + Y+ ++ Y + G A ++ M
Sbjct: 311 CIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSA 370
Query: 265 GCEPNVWIYNSLMDMHGRA----------------KNLRQLEKYTTVISAYNMAREFDMC 308
G +P++ YN L+ +A + L +E YT+++ Y
Sbjct: 371 GLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKA 430
Query: 309 VKFYNEFRMNG 319
++ ++ + G
Sbjct: 431 LEVFDRIKTAG 441
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 134/277 (48%), Gaps = 5/277 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + L +++M G++ + Y ++ K G E L E + + +DL P
Sbjct: 349 NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPV--- 405
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
++ L D +SG E L+ M++KG+ D Y S+ + A+ L
Sbjct: 406 IFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM 465
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRA 180
E+G+ + F L+ +Y +EG + V M+ N+ + I+ V+++G+SKR
Sbjct: 466 VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG-NVPNIITYNVLIDGYSKRGN 524
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A K+ ++L ++G IP T S+I+ C G A K+F EM Q+G VV Y++
Sbjct: 525 MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 584
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
M++ K GR +A +L +MK G P+ +Y+SL+
Sbjct: 585 MISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 153/338 (45%), Gaps = 23/338 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ G+ + Y ++ F IG E+ LF E + ++ + ++Y + +
Sbjct: 290 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIE---ADVYVYTSIISCNCR 346
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
SG L F +M +KG++ Y +LI +++ A+ L E + KG+ + +
Sbjct: 347 SGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVI 406
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F L+ Y E GMV++ L + M+ L I +G K A + ++
Sbjct: 407 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 466
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P +++ ++I+ YC+ G + +A++VF EM++KG ++ Y+ ++ Y K G ++
Sbjct: 467 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 526
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------------------LRQLEKYTT 294
+A +L +++ +G P+V+ SL+ HG + + + YT
Sbjct: 527 EAHKLKDELENRGLIPDVYTCTSLI--HGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 584
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
+IS + + K Y+E + G D + +VG
Sbjct: 585 MISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVG 622
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 154/348 (44%), Gaps = 19/348 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+++ + G+ + Y +E ++K D VA + E + + Y +L
Sbjct: 253 DEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGV---ACNVVTYTLLIHGF 309
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G+ E + F +M+EKGI D VY S+I VK A LF E +KG++
Sbjct: 310 SNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSA 369
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + G +E +V M+ ++++ I +++G+ + A+++
Sbjct: 370 HTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV 429
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G Y SI + C++ +A+ + M ++G +++++++ +Y K G
Sbjct: 430 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 489
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY----------------TT 294
+A R+ +M+ KG PN+ YN L+D + + N+++ K T+
Sbjct: 490 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 549
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+I + + DM +K ++E G V + M+ SK + EE
Sbjct: 550 LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEE 597
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A E F+ E+KG D L +L G V+ L M N ++ ++ ++++
Sbjct: 178 ALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLD 237
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC-RIGLYSKAEKVFIEMQQKGFD 232
G KR K+ +++ ++G VTY + I Y R+ L AE + M+++G
Sbjct: 238 GLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE-ILTLMEKEGVA 296
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
VV Y+ ++ + G+I +A RL +M+ KG E +V++Y S++ + R+ N+++
Sbjct: 297 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKR 352
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLIC--SFASIAEVKVAEELFKEAEEKGM 126
+L + G+ L+FFR M + + +VY+ I +V++ +L E KG+
Sbjct: 203 ALRRGGQVDSCLRFFRRMVNLDV--EVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGV 260
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + + Y + + E++ M+ + + ++++GFS A +
Sbjct: 261 KANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQR 320
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++E++ +G Y SII+ CR G +A +F EM KG Y +++
Sbjct: 321 LFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVC 380
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G++ A LV +M+ KG + N I+N+L+D
Sbjct: 381 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTLID 412
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 8/215 (3%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ G+ D Y I K+ ++ L R + +P+ T + L D K
Sbjct: 430 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV--SPN-TMSFTTLIDIYCK 486
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G E + FR+M+EKG + + Y LI ++ +K A +L E E +G++ D+
Sbjct: 487 EGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYT 546
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
L+ +G V+ L++ + M L + +++G SK A K+Y+++
Sbjct: 547 CTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMK 606
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
G P Y+S++ + L+S E + +++Q
Sbjct: 607 ETGLTPDDTVYSSLVGS-----LHSADESISMQIQ 636
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 117/226 (51%), Gaps = 1/226 (0%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ Y +L +L S R E L ++M+EKGI + Y LI S S +++ A EL
Sbjct: 321 PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAREL 380
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+ EKG++ ++ + L+ Y + GM+E L+VVE M++ L + ++ G+ K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK 440
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
R + A+ V +++ + +P VTY S+I+ CR G + A ++ M +G
Sbjct: 441 RNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWT 499
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y+SM+ K+ R+ +A L ++ K PNV +Y +L+D + +A
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKA 545
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 3/276 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + KM ++ D Y +++ + G+ + L R L P +
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWT-- 499
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + DSL KS R E F +++K ++ + +Y +LI + +V A + ++
Sbjct: 500 -YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKM 558
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
K L + F L+ +G +++ + E M +L + ++++ K +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDF 618
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + ++Q++S G P TY + I YCR G AE + +M++ G + YSS+
Sbjct: 619 DHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSL 678
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ YG GR A ++ +M GCEP+ + SL+
Sbjct: 679 IKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLI 714
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 5/229 (2%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
TH+ LC R E + F MK+ Y LI + A L K
Sbjct: 292 THLIHGLC----VERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVK 347
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E EEKG+ ++ + L+ + +EK E++ M L + ++NG+ KR
Sbjct: 348 EMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+ V E + S+ P TY +I YC+ ++ KA V +M ++ VV Y+
Sbjct: 408 MIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVH-KAMGVLNKMLERKVLPDVVTYN 466
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
S++ ++G A RL++ M +G P+ W Y S++D ++K + +
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEE 515
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 142/335 (42%), Gaps = 18/335 (5%)
Query: 23 GCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKF 82
GCY ++ + + G +++ +++E K+ + + Y + + K G E ++
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKV---CPNIYTYNKMVNGYCKVGNVEEANQY 240
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
+ E G+ D Y SLI + ++ A ++FKE KG R+ + L+
Sbjct: 241 VSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
E +++ +++ MK+ + + V++ A+ + +++ +G P T
Sbjct: 301 ERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHT 360
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y +I++ C KA ++ +M +KG V+ Y++++ Y K G I DA+ +V M+
Sbjct: 361 YTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELME 420
Query: 263 PKGCEPNVWIYNSLM------DMHG---------RAKNLRQLEKYTTVISAYNMAREFDM 307
+ PN YN L+ ++H K L + Y ++I + FD
Sbjct: 421 SRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ + G V D M+ K ++EE
Sbjct: 481 AYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEE 515
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 109/270 (40%), Gaps = 22/270 (8%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
EKM S + +S + ++ D + A LE + K+DL P+ + IL L
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGL--CTDGKLKEATLLEEKMVKIDLQPTVS-TDTILIHRL 612
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G + F+ M G D Y + I ++ ++ AE++ + +E G+ DL
Sbjct: 613 LKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDL 672
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF--------------- 175
+ L+ Y + G V++ M + S ++
Sbjct: 673 FTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGV 732
Query: 176 ---SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK-GF 231
S + V++ E+++ G P +Y ++ C IG AEKVF MQQK G
Sbjct: 733 CVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGI 792
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
+ ++++++ K + +A ++V M
Sbjct: 793 SPSELVFNALLSCCCKLEKHNEAAKVVDDM 822
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 134/277 (48%), Gaps = 5/277 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + L +++M G++ + Y ++ K G E L E + + +DL P
Sbjct: 345 NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPV--- 401
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
++ L D +SG E L+ M++KG+ D Y S+ + A+ L
Sbjct: 402 IFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM 461
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRA 180
E+G+ + F L+ +Y +EG + V M+ N+ + I+ V+++G+SKR
Sbjct: 462 VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG-NVPNIITYNVLIDGYSKRGN 520
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A K+ ++L ++G IP T S+I+ C G A K+F EM Q+G VV Y++
Sbjct: 521 MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 580
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
M++ K GR +A +L +MK G P+ +Y+SL+
Sbjct: 581 MISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 153/338 (45%), Gaps = 23/338 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ G+ + Y ++ F IG E+ LF E + ++ + ++Y + +
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIE---ADVYVYTSIISCNCR 342
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
SG L F +M +KG++ Y +LI +++ A+ L E + KG+ + +
Sbjct: 343 SGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVI 402
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F L+ Y E GMV++ L + M+ L I +G K A + ++
Sbjct: 403 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 462
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P +++ ++I+ YC+ G + +A++VF EM++KG ++ Y+ ++ Y K G ++
Sbjct: 463 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 522
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------------------LRQLEKYTT 294
+A +L +++ +G P+V+ SL+ HG + + + YT
Sbjct: 523 EAHKLKDELENRGLIPDVYTCTSLI--HGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 580
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
+IS + + K Y+E + G D + +VG
Sbjct: 581 MISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVG 618
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 154/348 (44%), Gaps = 19/348 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+++ + G+ + Y +E ++K D VA + E + + Y +L
Sbjct: 249 DEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGV---ACNVVTYTLLIHGF 305
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G+ E + F +M+EKGI D VY S+I VK A LF E +KG++
Sbjct: 306 SNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSA 365
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + G +E +V M+ ++++ I +++G+ + A+++
Sbjct: 366 HTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV 425
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G Y SI + C++ +A+ + M ++G +++++++ +Y K G
Sbjct: 426 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 485
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY----------------TT 294
+A R+ +M+ KG PN+ YN L+D + + N+++ K T+
Sbjct: 486 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 545
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+I + + DM +K ++E G V + M+ SK + EE
Sbjct: 546 LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEE 593
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A E F+ E+KG D L +L G V+ L M N ++ ++ ++++
Sbjct: 174 ALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLD 233
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC-RIGLYSKAEKVFIEMQQKGFD 232
G KR K+ +++ ++G VTY + I Y R+ L AE + M+++G
Sbjct: 234 GLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE-ILTLMEKEGVA 292
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
VV Y+ ++ + G+I +A RL +M+ KG E +V++Y S++ + R+ N+++
Sbjct: 293 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKR 348
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLIC--SFASIAEVKVAEELFKEAEEKGM 126
+L + G+ L+FFR M + + +VY+ I +V++ +L E KG+
Sbjct: 199 ALRRGGQVDSCLRFFRRMVNLDV--EVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGV 256
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + + Y + + E++ M+ + + ++++GFS A +
Sbjct: 257 KANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQR 316
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++E++ +G Y SII+ CR G +A +F EM KG Y +++
Sbjct: 317 LFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVC 376
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G++ A LV +M+ KG + N I+N+L+D
Sbjct: 377 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTLID 408
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 3/197 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ G+ D Y I K+ ++ L R ++P+ T + L D K
Sbjct: 426 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER--GVSPN-TMSFTTLIDIYCK 482
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G E + FR+M+EKG + + Y LI ++ +K A +L E E +G++ D+
Sbjct: 483 EGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYT 542
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
L+ +G V+ L++ + M L + +++G SK A K+Y+++
Sbjct: 543 CTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMK 602
Query: 193 SQGCIPGQVTYASIINA 209
G P Y+S++ +
Sbjct: 603 ETGLTPDDTVYSSLVGS 619
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+++++ G++ D ++ G + LF E R L P+ Y + L
Sbjct: 529 DELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQR--GLVPNVV-TYTAMISGL 585
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFAS 107
K GR+ E K + +MKE G+ D +VY+SL+ S S
Sbjct: 586 SKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHS 622
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 39/281 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ ++ G LD Y ++ A + ++ F E K S Y ++ D
Sbjct: 105 FKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFF---EQMKEAGPQPSLVTYNVIIDL 161
Query: 70 LGKSGRAFE-ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
GK GR++E IL+ F +MK +GI D Y + I + AS + + A ELF + +
Sbjct: 162 YGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTP 221
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + NA L++ + K Y A V
Sbjct: 222 DRVTY------------------------NALLDV-----------YGKAGWYNEAANVL 246
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ S GC+P VTY +++A+ R GL + A ++ M KG + V Y+S+++ Y +
Sbjct: 247 KEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRA 306
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G++ AM + +M+ C PN + +N+L+ MHG+ KN ++
Sbjct: 307 GKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEM 347
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +E+MK+ GI D Y + A E+ LF + +S + TP Y L
Sbjct: 173 LELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSS--NCTPDRV-TYNAL 229
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D GK+G E ++M+ G L + Y L+ +F A E+ KG+
Sbjct: 230 LDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGI 289
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ Y G VE+ +E+ M+ + + ++ K + + +
Sbjct: 290 EPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMV 349
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++E + + G P VT+ S++ A+ + G+YS+ KVF M++ GF+ ++ ++ YG
Sbjct: 350 IFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYG 409
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G A+ + M GC P++ +N+L+
Sbjct: 410 RCGSSDQALSIYDGMLQAGCTPDLATFNTLL 440
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 20/275 (7%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ + + + F+ ++E+G D Y SLI + + + K A F++ +E G
Sbjct: 92 LGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPS 151
Query: 130 LEVFLKLVLMYIEEGMV-EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
L + ++ +Y ++G E LE+ E MK + + + + A +++
Sbjct: 152 LVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELF 211
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
Q+ S C P +VTY ++++ Y + G Y++A V EM+ G +V Y+ +++ +G+
Sbjct: 212 TQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRA 271
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
G A + M KG EP+V+ Y SL+ SAY+ A + +
Sbjct: 272 GLCNAAAEMKDSMVSKGIEPDVFTYTSLL-------------------SAYSRAGKVEQA 312
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
++ YN+ R + + ++G+ K E+
Sbjct: 313 MEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEM 347
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 125/320 (39%), Gaps = 38/320 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + MK AG D + ++EA+ + G S++ AL + + TP + L
Sbjct: 383 LKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQ--ALSIYDGMLQAGCTPD-LATFNTL 439
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE---------------- 110
+L + GR ++ + YAS++ ++A+ E
Sbjct: 440 LAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYV 499
Query: 111 -------------------VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
V AE+ F G L D F ++ MY ++GM++K +
Sbjct: 500 PFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATD 559
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+++ L ++ + + Y + ++ G P V+Y ++I +Y
Sbjct: 560 TFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYS 619
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ G S A ++F EM G Y++ V Y G +A+ +V M GC+P+
Sbjct: 620 KHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEV 679
Query: 272 IYNSLMDMHGRAKNLRQLEK 291
Y +L+D + + ++E+
Sbjct: 680 TYRTLVDAYCKIGKFEEVER 699
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 131/325 (40%), Gaps = 22/325 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M++ G+ D + ++ AF K G +V +F +K P + IL ++
Sbjct: 351 FEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGM--KKAGFEPDKA-TFNILIEA 407
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ G + + L + M + G D + + +L+ + A + AE + E +
Sbjct: 408 YGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPN 467
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ Y G +EK E+V+++ + + + V +SK A +
Sbjct: 468 DIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFL 527
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G + T+ ++I+ Y + G+ KA F ++ G + VV Y+ ++ MYG+ G
Sbjct: 528 AMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREG 587
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
R + + G P++ YN TVI +Y+ +
Sbjct: 588 MYRKCEATLRECMAAGQTPDLVSYN-------------------TVIFSYSKHGQLSSAT 628
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVF 334
+ ++E NG D VG +
Sbjct: 629 RIFHEMVSNGIQPDSFTYNTFVGCY 653
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
K+ + G+ E L+ +++ + V L +E N+S I+ G +
Sbjct: 6 KQPWDSGLTESGEELLRKIVVLPNDECVSSVLTT------SEPNLSSSELLSIMKGLGRE 59
Query: 179 RAYWAAVKVYEQL-ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A++V+ + S P VT A ++ R + ++F ++++G+ V A
Sbjct: 60 GQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYA 119
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
Y+S+++ + + ++A+ +MK G +P++ YN ++D++G+
Sbjct: 120 YTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGK 164
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 138/303 (45%), Gaps = 6/303 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M AGI D Y ++ K G + +F E R L+ +T + L D+ K
Sbjct: 175 MAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN---PNTVVLTTLIDAHCK 231
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G L+ +M +G+ D Y +L+ F + ++K A ++ +E + G+ D
Sbjct: 232 EGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVT 291
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ +EG ++ +E+ + M + + + D +++G SK A ++ +++
Sbjct: 292 YTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMM 351
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P TY +I+A+C+ G K EMQ KG + +V Y+ ++ + G+++
Sbjct: 352 EAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMK 411
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFY 312
+A L+ M G PN YN L+D H + +R E+ SA M +F +
Sbjct: 412 NADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELK---SAKGMVSDFGVYTSLI 468
Query: 313 NEF 315
NEF
Sbjct: 469 NEF 471
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/221 (18%), Positives = 95/221 (42%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + +L + +SG+ F +M +G+ + +L+ +++ A
Sbjct: 111 PPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANA 170
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L + G+ D+ + + + G ++ +E+ E M LN + + +++
Sbjct: 171 LRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHC 230
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A +++ ++ ++G V Y +++N +CR+ A + EM++ G V
Sbjct: 231 KEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKV 290
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y++++ K G + AM + +M +G + Y +L+
Sbjct: 291 TYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALI 331
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 134/282 (47%), Gaps = 3/282 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E MK+AG++ D Y ++ + E+ AA+F + +S + P Y L D
Sbjct: 92 FEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKS--MGFVPDKV-TYNALLDV 148
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GKS R E ++ R+M+ G Y SLI ++A +K A EL + E G+ D
Sbjct: 149 YGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLD 208
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ ++ G E + V M+ A + C ++ R + +KV+E
Sbjct: 209 VFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + C+P VT+ +++ + + G+ S+ VF EM++ GF Y+++++ Y + G
Sbjct: 269 EIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCG 328
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
AM + +M G P++ YN+++ R Q EK
Sbjct: 329 SFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEK 370
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 132/296 (44%), Gaps = 16/296 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L G++G E+ F++MK G + + Y +LI +++ A +++K
Sbjct: 282 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRML 341
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G+ DL + ++ G+ E++ ++ MK+ ++ C +++ ++ +
Sbjct: 342 EAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIG 401
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ + E++ S P V +++ + L +AE F+E+++KGF + ++M+
Sbjct: 402 RMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAML 461
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------- 291
++YG+ ++ M G P++ YNSLM MH R++N + E+
Sbjct: 462 SIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIK 521
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y TVI AY + ++E R +G V D V ++ S E+
Sbjct: 522 PDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFED 577
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 36/263 (13%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
++ LGK G+ D+ + G D Y SLI + S + A +FK+ EE+
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 125 GMLRDLEVFLKLVLMYIEEGMV-EKTLEVVESMKNA-----ELNISDCISC--------- 169
G L + ++ +Y + GM K + E MKNA E + I+C
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEE 122
Query: 170 ---------------------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+++ + K R A++V ++ GC P VTY S+I+
Sbjct: 123 AAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLIS 182
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
AY R GL +A ++ +M + G + V Y+++++ + + G+ AMR+ A+M+ GC+P
Sbjct: 183 AYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKP 242
Query: 269 NVWIYNSLMDMHGRAKNLRQLEK 291
N+ +N+L+ MHG ++ K
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMK 265
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 15/275 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKIL 66
Y++M AGI D Y ++ A + G SEK+ A + + +LT
Sbjct: 337 YKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELT---------Y 387
Query: 67 CDSLGKSGRAFEILKFFRDMKE--KGILEDPSVYASLICSFASIAEVKV-AEELFKEAEE 123
C L EI + +E G++E +V + S ++ V AE F E +
Sbjct: 388 CSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKR 447
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG DL ++ +Y M KT E++ M + S ++ S+ +
Sbjct: 448 KGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFER 507
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+ +V ++++++G P ++Y ++I AYCR G +A ++F EM++ G V+ Y++ VA
Sbjct: 508 SEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVA 567
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y DA+ +V M GC+PN YNS++D
Sbjct: 568 SYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVD 602
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 17/238 (7%)
Query: 99 ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
A +I +V VA L + + G D+ + L+ + G + + V + M+
Sbjct: 2 AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 159 AELNISDCISCVIVNGFSKRRAYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ VI+N + K W +K ++E + + G +P + TY ++I R L+
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A VF +M+ GF V Y++++ +YGK+ R ++AM ++ +M+ GC P++ YNSL+
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLI 181
Query: 278 DMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ R L++ + YTT++S + A + + ++ + E R G
Sbjct: 182 SAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAG 239
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
EIL F M E G + Y SL+ + + +EE+ KE KG+ D + ++
Sbjct: 475 EILNF---MNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVI 531
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGC 196
Y G +++ + M+ + L + D I+ V ++ + A+ V +I GC
Sbjct: 532 FAYCRNGRMKEASRIFSEMRESGL-VPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGC 590
Query: 197 IPGQVTYASIINAYCR 212
P Q TY S+++ YC+
Sbjct: 591 KPNQNTYNSVVDGYCK 606
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/179 (17%), Positives = 71/179 (39%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F ++K KG D S +++ + E+ E G L + L+ M+
Sbjct: 442 FLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSR 501
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
E++ EV++ + + ++ + + A +++ ++ G +P +T
Sbjct: 502 SENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVIT 561
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
Y + + +Y ++ A V M + G Y+S+V Y K DA+ ++ +
Sbjct: 562 YNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSL 620
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 139/292 (47%), Gaps = 6/292 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++KM G + Y ++ K+G++ AA+ L + + P+ ++ L
Sbjct: 160 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS--AAIRLLRSMEQGNCQPNVV-VFSTL 216
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + E F +M KGI + Y SLI + E K L E + +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ +V +EGMV + +VV+ M + + + +++G R AVK
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++ ++ + C+ ++Y ++IN YC+I KA +F EM ++ V Y++++
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
GR++DA+ L +M +G P++ Y +L D KN R L+K ++ A
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY--LCKN-RHLDKAMALLKA 445
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 99/259 (38%), Gaps = 35/259 (13%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P ST + L S+ K+ +L R M GI D A +I S + V A
Sbjct: 67 PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFS 126
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ + G D F L+ EG + + L + + M + ++NG
Sbjct: 127 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 186
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K AA+++ + C P V ++++I++ C+ ++A +F EM KG +V
Sbjct: 187 KVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIV 246
Query: 237 AYSSM-----------------------------------VAMYGKTGRIRDAMRLVAKM 261
Y+S+ V K G + +A +V M
Sbjct: 247 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 306
Query: 262 KPKGCEPNVWIYNSLMDMH 280
+G EPNV YN+LMD H
Sbjct: 307 IHRGVEPNVVTYNALMDGH 325
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 104/251 (41%), Gaps = 3/251 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M V + Y ++ + KI +K A++L E + +LTP++ Y L
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDK--AMYLFEEMSRQELTPNTV-TYNTLIHG 394
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L GR + + F +M +G + D Y +L + A L K E D
Sbjct: 395 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 454
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++++ ++ G +E ++ ++ + L + ++++G K+ A K++
Sbjct: 455 IQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 514
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ GC P TY I + R + ++ EM +GF V + +V M G
Sbjct: 515 EMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Query: 250 RIRDAMRLVAK 260
+ +++ K
Sbjct: 575 LDQSVKQILCK 585
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 87/198 (43%)
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
F +M + + + Y +LI + ++ A LF E +G + DL + L
Sbjct: 372 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 431
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ ++K + ++++++ + + I I++G + A ++ L S+G P
Sbjct: 432 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVW 491
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY +I+ C+ GL ++A K+F EM + G Y+ + + + + L+ +M
Sbjct: 492 TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 551
Query: 262 KPKGCEPNVWIYNSLMDM 279
+G +V L+ M
Sbjct: 552 LARGFSVDVSTTTLLVGM 569
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/191 (16%), Positives = 84/191 (43%), Gaps = 7/191 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK--LDLTPSSTHMYK 64
++ +E+M + ++ Y ++ +G + +LF E +R DL Y+
Sbjct: 370 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV-----TYR 424
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L D L K+ + + + ++ D +Y +++ E++ A +LF K
Sbjct: 425 TLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ ++ + ++ ++G++ + ++ M + +DC +I GF +
Sbjct: 485 GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRT 544
Query: 185 VKVYEQLISQG 195
+++ E+++++G
Sbjct: 545 IELLEEMLARG 555
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 139/292 (47%), Gaps = 6/292 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++KM G + Y ++ K+G++ AA+ L + + P+ ++ L
Sbjct: 160 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS--AAIRLLRSMEQGNCQPNVV-VFSTL 216
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + E F +M KGI + Y SLI + E K L E + +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ +V +EGMV + +VV+ M + + + +++G R AVK
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++ ++ + C+ ++Y ++IN YC+I KA +F EM ++ V Y++++
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
GR++DA+ L +M +G P++ Y +L D KN R L+K ++ A
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY--LCKN-RHLDKAMALLKA 445
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 99/259 (38%), Gaps = 35/259 (13%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P ST + L S+ K+ +L R M GI D A +I S + V A
Sbjct: 67 PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFS 126
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ + G D F L+ EG + + L + + M + ++NG
Sbjct: 127 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 186
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K AA+++ + C P V ++++I++ C+ ++A +F EM KG +V
Sbjct: 187 KVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIV 246
Query: 237 AYSSM-----------------------------------VAMYGKTGRIRDAMRLVAKM 261
Y+S+ V K G + +A +V M
Sbjct: 247 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 306
Query: 262 KPKGCEPNVWIYNSLMDMH 280
+G EPNV YN+LMD H
Sbjct: 307 IHRGVEPNVVTYNALMDGH 325
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 105/252 (41%), Gaps = 3/252 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M V + Y ++ + KI +K LF E SR+ +LTP++ Y L
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEM-SRQ-ELTPNTV-TYNTLIHG 394
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L GR + + F +M +G + D Y +L + A L K E D
Sbjct: 395 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 454
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++++ ++ G +E ++ ++ + L + ++++G K+ A K++
Sbjct: 455 IQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 514
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ GC P TY I + R + ++ EM +GF V + +V M G
Sbjct: 515 EMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Query: 250 RIRDAMRLVAKM 261
+ +++ K+
Sbjct: 575 LDQSVKQILCKI 586
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 87/198 (43%)
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
F +M + + + Y +LI + ++ A LF E +G + DL + L
Sbjct: 372 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 431
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ ++K + ++++++ + + I I++G + A ++ L S+G P
Sbjct: 432 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVW 491
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY +I+ C+ GL ++A K+F EM + G Y+ + + + + L+ +M
Sbjct: 492 TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 551
Query: 262 KPKGCEPNVWIYNSLMDM 279
+G +V L+ M
Sbjct: 552 LARGFSVDVSTTTLLVGM 569
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 130/284 (45%), Gaps = 20/284 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M S G + DS Y +++ EK LF E ++ +TP + Y L D
Sbjct: 112 EMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQE--MKRNGITPD-VYTYTTLLDRFC 168
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G + +F +M++ G + Y +LI ++ ++ A E+F+ G + ++
Sbjct: 169 KVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIV 228
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC-----------------ISCVIVNG 174
+ L+ + + G EK ++ MKN +++I D +V+G
Sbjct: 229 TYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDG 288
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K A + E + +GC P Q+ Y ++I+ +C++G +A++VF +M G
Sbjct: 289 LCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPN 348
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V YSS++ K R+ A++++ KM C PNV IY ++D
Sbjct: 349 VYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVD 392
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 124/248 (50%), Gaps = 21/248 (8%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ LC +GK +A+ ++ R+M KG + D S Y+ +I + ++V+ A +LF+E +
Sbjct: 95 RCLC-CIGKFEKAYNVI---REMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKR 150
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D+ + L+ + + G++E+ + M+ + +++ + K R
Sbjct: 151 NGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSR 210
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD----------- 232
A +++E ++S GC+P VTY ++I+ +C+ G KA +++ M+ D
Sbjct: 211 ANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIV 270
Query: 233 ------KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
VV Y ++V K ++++A L+ M +GCEPN IY++L+D + L
Sbjct: 271 DSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKL 330
Query: 287 RQLEKYTT 294
+ ++ T
Sbjct: 331 DEAQEVFT 338
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 153/348 (43%), Gaps = 39/348 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M S G V + Y +++ K G++EK ++ ++ K+D+ P ++I+ DS
Sbjct: 215 FEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDI-PDVDIYFRIV-DS 272
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++KE ++ Y +L+ +VK A +L + +G +
Sbjct: 273 ---------------ELKEPNVV----TYGALVDGLCKAHKVKEARDLLETMSLEGCEPN 313
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ L+ + + G +++ EV M + + +++ K + A+KV
Sbjct: 314 QIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLT 373
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ C P V Y +++ C++G +A ++ + M++KG VV Y++M+ +GK G
Sbjct: 374 KMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAG 433
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM----------DMHGRAKNLRQ------LEKYT 293
R+ + L+ M KGC PN Y L+ D H + ++Q + Y
Sbjct: 434 RVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYR 493
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
VI + + EF + E +G V + +++ F K ++E
Sbjct: 494 KVIEGF--SHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLE 539
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A + Y +++ G + +V + C IG + KA V EM KGF YS ++
Sbjct: 71 AERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIG 130
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
++ A +L +MK G P+V+ Y +L+D + + Q
Sbjct: 131 YLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAP 190
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
YT +I AY R+ + + NG V
Sbjct: 191 NVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCV 224
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 106/233 (45%), Gaps = 6/233 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++++ K+G +++ L L E + P+ Y + D GK+GR L+ +
Sbjct: 387 YTEMVDGLCKVGKTDEAYRLMLMMEEK--GCYPNVV-TYTAMIDGFGKAGRVDRCLELLQ 443
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M KG + Y LI + + A +L +E ++ + + ++ K++ + E
Sbjct: 444 LMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEF 503
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ L + E ++ + I + ++++ F K A++++E+L S Q TY
Sbjct: 504 VASLGL-LAELSEDGSVPILP-VYKLLIDNFIKAGRLEMALELHEEL-SSFSAAYQNTYV 560
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
S+I + KA K++ +M ++GF + ++ + G+ +A++L
Sbjct: 561 SLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+I++GC P + + S+++AYCR G Y A K+ +M G+ V Y+ ++
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIG 54
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 147/331 (44%), Gaps = 20/331 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M++ + Y +++A K G EK +FL+ +SR + Y + D
Sbjct: 147 FEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRG---CRPNIFTYTSMIDG 203
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LGKSG + F +M +G++ VY SLI A +LF+E KG+ D
Sbjct: 204 LGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPD 263
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F LV G + + + ++ + + V+++ K + A +++
Sbjct: 264 HVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFG 323
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L G +P T+ ++++ C+ G A + +M++ G V Y++++ K+G
Sbjct: 324 ELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSG 383
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGR------------AKNLRQLEKYTT 294
R+ +A +L+ +M+ G EP+V YN+L+D GR AK Y T
Sbjct: 384 RVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNT 443
Query: 295 VISAYNMAREFDMCVKFYNEFRMN--GGVID 323
+++ MA D K +N + GVID
Sbjct: 444 ILNGLCMAGRVDEAYKLFNGMKQETVDGVID 474
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 17/272 (6%)
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
K + IL+ P ++ L +AS ++ + E K E + L+ +++ G
Sbjct: 47 KSRYILQ-PRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYT 105
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
+K L V M + L V++N F K + + K++E++ +Q C P +TY+ +
Sbjct: 106 QKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSIL 165
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+A C+ G KA KVF++M+ +G + Y+SM+ GK+G + A L +M +G
Sbjct: 166 IDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGL 225
Query: 267 EPNVWIYNSLMDMHGR-------AKNLRQL---------EKYTTVISAYNMAREFDMCVK 310
+YNSL+ GR AK R++ +T+++ +A +
Sbjct: 226 VATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARR 285
Query: 311 FYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ E R G +D + +++ K +++E
Sbjct: 286 IFQEARDVGCALDVNLYNVLIDTLCKSKRLDE 317
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+ L + Y +++AF K G ++K A++ L T+ + +L ++
Sbjct: 78 KRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGL---RPDTYTFNVLMNAF 134
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+ R + K F +M+ + + Y+ LI + V+ A ++F + + +G ++
Sbjct: 135 KKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNI 194
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ + G V+K + E M + L + + +++G + AA K++ +
Sbjct: 195 FTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFRE 254
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++S+G P VT+ S++ G S+A ++F E + G V Y+ ++ K+ R
Sbjct: 255 MLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKR 314
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +A + +++ G P+V+ +N+LMD
Sbjct: 315 LDEAWEIFGELEEDGLVPDVYTFNALMD 342
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 164/382 (42%), Gaps = 60/382 (15%)
Query: 19 VLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+L+S C Y +++A+ K G EK A+F E RK L+PS+ +Y D L K
Sbjct: 181 LLESHCIPTEDTYALLLKAYCKSGLLEKAEAVF--AEMRKYGLSPSAI-VYNAYIDGLVK 237
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G + ++ F MK G Y LI + ++ +A+ +F E + ++
Sbjct: 238 GGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICT 297
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F LV EG+ EK E+ E M+ A ++ +S+ + A +++ +
Sbjct: 298 FTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQ 357
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC-------VVAYSS----- 240
GC P + +Y +++AY R GL+ A+ VF EM++ G + AYSS
Sbjct: 358 HMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVA 417
Query: 241 -----------------------MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
M+ +YG+ G+ L + M+ C ++ YN L+
Sbjct: 418 KCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILI 477
Query: 278 DMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
+++GRA + ++E+ +T+ I AY+ + + C++ + + G
Sbjct: 478 NVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCY 537
Query: 322 IDRAMAGIMVGVFSKLSQIEEL 343
D A +++ S QIE++
Sbjct: 538 PDGGTAKVLLSACSSEEQIEQV 559
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 141/298 (47%), Gaps = 16/298 (5%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D+ G+ ++ + ++ E + YA L+ ++ ++ AE +F E
Sbjct: 157 VYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEM 216
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G+ V+ + ++ G K +E+ MK + +++N + K
Sbjct: 217 RKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKS 276
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++++ +Q C P T+ +++NA R GL KAE++F +MQ+ G++ V AY+++
Sbjct: 277 HMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNAL 336
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------KNLRQ--- 288
+ Y + G A + + M+ GCEP+ YN ++D +GRA + +++
Sbjct: 337 MESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGI 396
Query: 289 ---LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
++ + ++SAY+ A C + +G D + M+ ++ +L Q ++
Sbjct: 397 TPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKM 454
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M + D VY L+ ++ + K E + E E + + + L+ Y + G+
Sbjct: 146 MNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 205
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+EK V M+ L+ S + ++G K AV+++ ++ GC P TY
Sbjct: 206 LEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTM 265
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+IN Y + A+ +F EM+ + + ++++V + G A + +M+ G
Sbjct: 266 LINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAG 325
Query: 266 CEPNVWIYNSLMDMHGRA 283
EP+V+ YN+LM+ + RA
Sbjct: 326 YEPDVYAYNALMESYSRA 343
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 165/344 (47%), Gaps = 22/344 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M + + + ++ A+ + G E A+L L ++ +TP+ Y + ++
Sbjct: 97 FEDMPLNDVEWNVYSFTALINAYGRNGQHE--ASLHLLARMKREKVTPNLI-TYNTVINA 153
Query: 70 LGKSGRAFE-ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G +E +L F M+ +GI D Y +L+ + +S V+ A +F+ E G++
Sbjct: 154 CAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVP 213
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKV 187
D + LV +Y + E E++ M+ A N D ++ +++ + + Y AA K+
Sbjct: 214 DSITYNALVDIYGQADRHEGVGELLREMEQAG-NAPDVVAYNILIEAYGRAGKYRAAAKM 272
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++Q+ GC P VT+++++ AY + G Y + +F +M+++G + V Y++++ ++G+
Sbjct: 273 FKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQ 332
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM------DMHGRAKNLRQ----------LEK 291
G ++++ L + G EP++ Y L+ +H AK + + +
Sbjct: 333 GGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDG 392
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+T +I+AY A + +N + +G D ++G +
Sbjct: 393 FTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHA 436
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 119/269 (44%), Gaps = 3/269 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ AG D Y ++EA+ + G A +F + + + TP + L ++ G
Sbjct: 240 EMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQ--EAGCTPDVV-TFSTLLEAYG 296
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G E+ F DMKE+G D + Y +LI F + + LF + + G+ D+
Sbjct: 297 KHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMS 356
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + G+ + ++ M + + + ++ + Y A + +
Sbjct: 357 TYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSM 416
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
GC P TY ++I A+ GLY +A ++ M +G V Y+S++ +G+ G
Sbjct: 417 KESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLF 476
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
DA+ M+ C PN Y +LM ++
Sbjct: 477 DDAIEFSRDMEEARCSPNRHTYEALMGVY 505
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 118/274 (43%), Gaps = 3/274 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M AG+V DS Y +++ + + E V L E E Y IL ++
Sbjct: 203 FRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAG---NAPDVVAYNILIEA 259
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G++G+ K F+ M+E G D +++L+ ++ LF + +E+G D
Sbjct: 260 YGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPD 319
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ ++ + G ++++ + + + + ++ K + AA K++
Sbjct: 320 VNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHR 379
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ P + +I AY LYS+A F M++ G + Y++++ + G
Sbjct: 380 HMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGG 439
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+A M +G +V YNSL++ GR
Sbjct: 440 LYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRG 473
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 118/259 (45%), Gaps = 3/259 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ I F + D +K LF + + + H+Y I+ +G+ G + + F
Sbjct: 41 FSLIFREFAQRSDWQKALRLFKYMQRHQW--CKPNEHVYTIMIGIMGREGMLDKASELFE 98
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
DM + + + +LI ++ + + + L + + + +L + ++ + G
Sbjct: 99 DMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGG 158
Query: 145 M-VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
+ E L + M++ + +++ S R A V+ + G +P +TY
Sbjct: 159 LEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITY 218
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
++++ Y + + ++ EM+Q G VVAY+ ++ YG+ G+ R A ++ +M+
Sbjct: 219 NALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQE 278
Query: 264 KGCEPNVWIYNSLMDMHGR 282
GC P+V +++L++ +G+
Sbjct: 279 AGCTPDVVTFSTLLEAYGK 297
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 120/281 (42%), Gaps = 18/281 (6%)
Query: 80 LKFFRDM-KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
L+ F+ M + + + VY +I + A ELF++ + ++ F L+
Sbjct: 58 LRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALIN 117
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA-VKVYEQLISQGCI 197
Y G E +L ++ MK ++ + ++N +K W + ++ Q+ +G
Sbjct: 118 AYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQ 177
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P +TY ++++A GL +A VF M + G + Y+++V +YG+ R L
Sbjct: 178 PDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGEL 237
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNM 301
+ +M+ G P+V YN L++ +GRA R K ++T++ AY
Sbjct: 238 LREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGK 297
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+D + + + G D ++ VF + +E
Sbjct: 298 HGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQE 338
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 111/237 (46%), Gaps = 18/237 (7%)
Query: 105 FASIAEVKVAEELFKEAEEKGMLRDLE-VFLKLVLMYIEEGMVEKTLEVVESMKNAELNI 163
FA ++ + A LFK + + E V+ ++ + EGM++K E+ E M ++
Sbjct: 48 FAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEW 107
Query: 164 SDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL-YSKAEKV 222
+ ++N + + + A++ + ++ + P +TY ++INA + GL + +
Sbjct: 108 NVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGL 167
Query: 223 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
F +M+ +G ++ Y+++++ G + +A + M G P+ YN+L+D++G+
Sbjct: 168 FAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQ 227
Query: 283 AKN-------LRQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
A LR++E+ Y +I AY A ++ K + + + G D
Sbjct: 228 ADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPD 284
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 120/296 (40%), Gaps = 42/296 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M+ AG D + ++EA+ K G ++V LF + + R T + Y L
Sbjct: 273 FKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERG---TEPDVNTYNTLIQV 329
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASL---------------------------- 101
G+ G E + F D+ + G+ D S YA L
Sbjct: 330 FGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPT 389
Query: 102 -------ICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
I ++ + A A F +E G DLE + L+ + G+ +
Sbjct: 390 TDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYL 449
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
+M + ++ ++ F + + A++ + C P + TY +++ YC G
Sbjct: 450 TMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAG 509
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
L+ +A+ F+++Q G V +Y ++++ + R DA +++ +M EPN+
Sbjct: 510 LFDEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEM----LEPNM 561
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+E + + G + KT+E + +L I+D +I F++R + A++++
Sbjct: 8 DVENAINNLTSLAPRGSIAKTMEGYRN----KLTINDF--SLIFREFAQRSDWQKALRLF 61
Query: 189 EQLI-SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ + Q C P + Y +I R G+ KA ++F +M + V ++++++ YG+
Sbjct: 62 KYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGR 121
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G+ ++ L+A+MK + PN+ YN++++
Sbjct: 122 NGQHEASLHLLARMKREKVTPNLITYNTVIN 152
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 136/304 (44%), Gaps = 1/304 (0%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+++ M S G D Y +++A YK G + LF + + P Y L
Sbjct: 136 QFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLI-TYNTLI 194
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D + + E +K F+D+ KG + D Y S++ A + + AEE+FK+ + G
Sbjct: 195 DGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCA 254
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + ++ + G + + LE+ E M + + +++ K + A KV
Sbjct: 255 PNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKV 314
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
E++ G +P VTY +++ C+ L KA ++F M G +V+YS ++ K
Sbjct: 315 LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCK 374
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDM 307
T ++ DA L +M + P+V +N LMD +A L + + V+S +N+ +
Sbjct: 375 TNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVT 434
Query: 308 CVKF 311
C
Sbjct: 435 CTTL 438
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 2/195 (1%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M EKG D Y+++I +V A E+ +E EKG+ D+ + +V G
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
V++ E+ M + + ++NG K A K+ E++ S+G P +TY +
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL--VAKMKP 263
I++ CR+G S+A++ F M +G+ VVAY+ ++ K G++ +A L M
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 264 KGCEPNVWIYNSLMD 278
+ P++ YN+L+D
Sbjct: 181 RKVAPDLITYNTLID 195
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 121/260 (46%), Gaps = 12/260 (4%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
K+ D+ KV LE E K+ P Y IL D L K+ + + F M + G
Sbjct: 307 KVDDAHKV----LE-EMSKIGAVPDVV-TYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D Y+ ++ +V A LF E+ ++ D+ F L+ + G +++ +++
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420
Query: 154 ESMKNAELNISDCISCV-IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ M + + D ++C +++G + + AV++++ ++ +G + + + ++ CR
Sbjct: 421 DVMSEHNV-LPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCR 479
Query: 213 IGLYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
G ++A F M + F VV Y+++V + GR+ A+ +M GC P+
Sbjct: 480 EGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDY 539
Query: 271 WIYNSLMDMHGRAKNLRQLE 290
YN+L M+G K R ++
Sbjct: 540 VAYNTL--MNGLRKQGRHIQ 557
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 6/234 (2%)
Query: 1 TNSQSKLH-YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS 59
TN K H + M G D Y ++ K LF RKL P
Sbjct: 340 TNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL--VPDV 397
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
+ IL D L K+G+ E M E +L D +L+ A LF+
Sbjct: 398 V-TFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQ 456
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS-DCIS-CVIVNGFSK 177
EKG + D+ ++ EG + + L +SM ++ S D ++ +VN +
Sbjct: 457 YMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIE 516
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
AV ++Q+ GC P V Y +++N + G + +A+++ M++KGF
Sbjct: 517 AGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 570
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%)
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G P VTY++II+ C+ G ++A ++ EM +KG + V Y+ +V + G+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ +A L KM +GC N YN+L++ + +N+ +
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIER 98
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 4/276 (1%)
Query: 18 IVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAF 77
I +D YC ++ ++G EK + + + TPS Y IL ++ + G
Sbjct: 321 IRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGV--TPSKIS-YNILVNAYCQEGDVK 377
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
+ + M+E+G+ + + ++I F EV AE + EKG+ +E + L+
Sbjct: 378 KAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLI 437
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
Y ++G + E ++ M A + + ++N K R A V +I +G
Sbjct: 438 NGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVS 497
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P Y +I A C + A + F EM Q G D +V Y++++ G+ GR++ A L
Sbjct: 498 PNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDL 557
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKY 292
+M KGC P+V YNSL+ + ++ N ++ LE Y
Sbjct: 558 FLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELY 593
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 13/249 (5%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
+I D+ K LF E R ++ P+ T Y L D K G E L F MKE+ +
Sbjct: 207 RIKDARK---LFDEMIQR--NMVPN-TVTYNTLIDGYCKVGGIEEALGFKERMKEQNVEC 260
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ Y SL+ V A E+ E E G L FL V G + L
Sbjct: 261 NLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPG--GFLSFVFDDHSNGAGDDGL--- 315
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
E+ I + C+++NG + A +V +L+ G P +++Y ++NAYC+
Sbjct: 316 --FDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQE 373
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G KA +M+++G + + ++++++ + +TG + A V +M KG P V Y
Sbjct: 374 GDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETY 433
Query: 274 NSLMDMHGR 282
NSL++ +G+
Sbjct: 434 NSLINGYGQ 442
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 6/272 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ ++M AGI + Y ++ K D + + A + + ++P++ +Y +L
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCK--DRKLIDAEIVLADMIGRGVSPNA-EIYNML 506
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
++ + + +FF +M + GI Y +LI VK AE+LF + KG
Sbjct: 507 IEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGC 566
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV- 185
D+ + L+ Y + +K LE+ + MK L I + ++ R+ +
Sbjct: 567 NPDVITYNSLISGYAKSVNTQKCLELYDKMK--ILGIKPTVGTFHPLIYACRKEGVVTMD 624
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K++++++ +P Q Y +I +Y G KA + +M +G D V Y+S++ Y
Sbjct: 625 KMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAY 684
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ R+ + LV MK KG P V YN L+
Sbjct: 685 LRDRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 90/195 (46%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E + M++ G + L+ + + +F + + G D + K V
Sbjct: 105 EATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAV 164
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
+ ++K E+++SM + S +++ G K R A K+++++I + +
Sbjct: 165 QAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMV 224
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P VTY ++I+ YC++G +A M+++ + +V Y+S++ +GR+ DA +
Sbjct: 225 PNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREV 284
Query: 258 VAKMKPKGCEPNVWI 272
+ +M+ G P ++
Sbjct: 285 LLEMEGSGFLPGGFL 299
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
R + + V+ +I G P V Y + A + K ++ M + G V AY
Sbjct: 136 RHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAY 195
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ ++ K RI+DA +L +M + PN YN+L+D
Sbjct: 196 NLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLID 235
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 112/263 (42%), Gaps = 6/263 (2%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ ++++M +GI Y ++ + G +K LFL+ + + Y
Sbjct: 517 KDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCN---PDVITY 573
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE-VKVAEELFKEAE 122
L KS + L+ + MK GI + LI +A E V +++F+E
Sbjct: 574 NSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI--YACRKEGVVTMDKMFQEML 631
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ ++ D V+ +++ Y E+G V K + + + M + ++ ++ + + R
Sbjct: 632 QMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVS 691
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ + + ++G +P TY +I C + ++ A + EM ++G V ++
Sbjct: 692 EIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLI 751
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ + G +R+A + +++ G
Sbjct: 752 SGLREEGMLREAQIVSSELSIGG 774
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M +V D Y +++ ++ + G+ K +L + + +D + Y L +
Sbjct: 627 FQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVT---YNSLILA 683
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ R EI DMK KG++ Y LI + + A ++E E+G+L +
Sbjct: 684 YLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLN 743
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN 162
+ + +L+ EEGM+ + V + LN
Sbjct: 744 VSMCYQLISGLREEGMLREAQIVSSELSIGGLN 776
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 127/260 (48%), Gaps = 3/260 (1%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G+ + ++ A G +E+ A+F E ++ L P T Y L K+G
Sbjct: 357 GLSPKTATLVAVITALGNAGRTEEAEAIFEEL--KEGGLMPR-TRAYNALLKGYVKTGSL 413
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
+ +M+ G D Y+ LI ++A+ + A + KE E G+ + VF ++
Sbjct: 414 KDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRI 473
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ Y + G +K+ +V+ M+N+ ++ V+++ F K A+ ++++ +G
Sbjct: 474 LASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGV 533
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P VT+ ++I+ +C+ G ++KAE++F MQ+ G C Y+ M+ +G+ R D
Sbjct: 534 QPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKT 593
Query: 257 LVAKMKPKGCEPNVWIYNSL 276
L+ KM+ +G NV Y +L
Sbjct: 594 LLGKMQSQGLLANVVTYTTL 613
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 117/272 (43%), Gaps = 3/272 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +++S I LD I+ F K GD + + + L+P + + ++ +
Sbjct: 315 YAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGN--GLSPKTATLVAVIT-A 371
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG +GR E F ++KE G++ Y +L+ + +K AE + E E G D
Sbjct: 372 LGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPD 431
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y G E V++ M+ + + + + I+ + R + + +V
Sbjct: 432 EHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLR 491
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + G P + Y +I+ + + A F M+ +G V +++++ + K+G
Sbjct: 492 EMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSG 551
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
A L M+ GC P YN +++ G
Sbjct: 552 HHNKAEELFEAMQESGCSPCTTTYNIMINSFG 583
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/287 (19%), Positives = 133/287 (46%), Gaps = 5/287 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIG--DSEKVAALFLECESRKLDLTPSSTHMYK 64
L+ +M+ G D Y I+++ + DS + ++ E ES K++L +
Sbjct: 275 LNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIEL---DGQLLN 331
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ KSG + F ++ G+ + ++I + + + AE +F+E +E
Sbjct: 332 DIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEG 391
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G++ + L+ Y++ G ++ +V M+ + + + ++++ ++ + +A
Sbjct: 392 GLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESA 451
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V +++ + G P ++ I+ +Y G + K+ +V EM+ G Y+ M+
Sbjct: 452 RIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDT 511
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+GK + A+ +M+ +G +P+ +N+L+D H ++ + + E+
Sbjct: 512 FGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEE 558
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 125/306 (40%), Gaps = 26/306 (8%)
Query: 33 YKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGIL 92
+ +G SEK+ FL S++ LTP + Y L + ++ + L M+ G
Sbjct: 233 HALGRSEKLYEAFLL--SQRQTLTPLT---YNALIGACARNDDLEKALNLMSRMRRDGYP 287
Query: 93 EDPSVYASLICSFASI--AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
D Y+ +I S ++ + ++++ E E + D ++ +++ + + G V + +
Sbjct: 288 SDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAM 347
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
+ ++ L+ ++ A ++E+L G +P Y +++ Y
Sbjct: 348 SFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGY 407
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ G AE + EM++ GF YS ++ Y GR A ++ +M+ G PN
Sbjct: 408 VKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNS 467
Query: 271 WIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIM 330
+++ + ++++Y ++ + E R +G DR +M
Sbjct: 468 YVF-------------------SRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVM 508
Query: 331 VGVFSK 336
+ F K
Sbjct: 509 IDTFGK 514
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 31/248 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+++G+ +S + +I+ ++ G +K + E R ++P H Y ++ D+
Sbjct: 456 KEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM--RNSGVSPDR-HFYNVMIDTF 512
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG----- 125
GK L F M+ +G+ D + +LI AEELF+ +E G
Sbjct: 513 GKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCT 572
Query: 126 -----MLRDL------------------EVFLKLVLMYIEEGMVEKTLEVVESMKNAELN 162
M+ + L V+ Y G+ E+ + M+ L
Sbjct: 573 TTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLGLSEQAINAFRVMRADGLK 632
Query: 163 ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
S + ++N F + R A V + + P VTY +++ A R+ + K V
Sbjct: 633 PSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAV 692
Query: 223 FIEMQQKG 230
+ EM G
Sbjct: 693 YEEMTLSG 700
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 117/297 (39%), Gaps = 53/297 (17%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD--S 69
+M+ +G D Y +++A+ G E + E E+ + P+S +IL
Sbjct: 422 EMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEAS--GVRPNSYVFSRILASYRD 479
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK ++F++L R+M+ G+ D Y +I +F + A F +G+ D
Sbjct: 480 RGKWQKSFQVL---REMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPD 536
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC--VIVNGFSKRRAYWAAVKV 187
+ L+ + + G K E+ E+M+ E S C + +++N F ++ + +
Sbjct: 537 AVTWNTLIDCHCKSGHHNKAEELFEAMQ--ESGCSPCTTTYNIMINSFGEQERWEDVKTL 594
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ SQG + VTY ++ GL +A F M+ G V+ +S++ +G+
Sbjct: 595 LGKMQSQGLLANVVTYTTL-------GLSEQAINAFRVMRADGLKPSVLVLNSLINAFGE 647
Query: 248 TGRIRDAMRLVAKMKPK-----------------------------------GCEPN 269
R +A ++ MK GC P+
Sbjct: 648 DRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPD 704
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++M+ G+ D+ + +++ K G K LF E+ + T Y I+
Sbjct: 522 LATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELF---EAMQESGCSPCTTTYNIM 578
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+S G+ R ++ M+ +G+L + Y +L S +I F+ G+
Sbjct: 579 INSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLGLSEQAI-------NAFRVMRADGL 631
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ V L+ + E+ + V++ MK +L ++ + +
Sbjct: 632 KPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPA 691
Query: 187 VYEQLISQGCIPGQVTYASIINA 209
VYE++ GC P + A + +A
Sbjct: 692 VYEEMTLSGCTPDRKARAMLRSA 714
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 136/287 (47%), Gaps = 5/287 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E ++S G + D Y ++ K G + + + +F + + L Y + D
Sbjct: 417 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFAL---DARAYNAVVDG 473
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KSG+ + + +MKEK + + Y +++ A I + A LF+EA+ KG+ +
Sbjct: 474 FCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELN 533
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ L+ + + G +++ ++E M L + +++ K A+ ++
Sbjct: 534 VVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 593
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ C P TY+ +IN CR+ Y+KA + +MQ++G VV Y++M++ K G
Sbjct: 594 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 653
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
I DA L + K G P+ +N+L++ G + R +E Y T +
Sbjct: 654 NITDAYSLFERFKANGGIPDAASFNALIE--GMSNANRAMEAYQTTV 698
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 142/334 (42%), Gaps = 23/334 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILC 67
+EKM AG + Y ++ F+ G E +F E R K DLT +T+M
Sbjct: 347 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYM----- 401
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D + K+G + F D++ G L D Y+ LI + + +F +++G
Sbjct: 402 DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 461
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D + +V + + G V K E++E MK + + IV+G +K A +
Sbjct: 462 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 521
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+E+ S+G V Y+S+I+ + ++G +A + EM +KG V ++S++ K
Sbjct: 522 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK 581
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----------------LRQLEK 291
I +A+ MK C PN + Y+ L++ R + + +
Sbjct: 582 AEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 641
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
YTT+IS + F+ NGG+ D A
Sbjct: 642 YTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 675
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 100/193 (51%)
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
S Y LI + A + A EL ++ +E G + +F LV EG V L +V+
Sbjct: 46 SAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDE 105
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
+K + L + V ++ F K A K + +L +QG P V+Y S+I C+ G
Sbjct: 106 VKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGR 165
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+AE++F +M+ + C AY++M+ YG GR DA +L+ +++ +GC P+V +NS
Sbjct: 166 LGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 225
Query: 276 LMDMHGRAKNLRQ 288
++ G+ + + +
Sbjct: 226 ILTCLGKKRKVDE 238
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 164/400 (41%), Gaps = 76/400 (19%)
Query: 18 IVLDSGCYCQIMEAFYKIGDSEKVAALFLE-----------CESRKLD----LTPSSTH- 61
I++D C +E Y+I D + A+LF C++RKL+ + S++
Sbjct: 259 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 318
Query: 62 -------MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI------------ 102
Y L D LGK G+ E + F M + G +P VY SLI
Sbjct: 319 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 378
Query: 103 ------------------------CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
C F + EV+ +F++ G L D+ + L+
Sbjct: 379 HKVFKELIRRGCKPDLTLLNTYMDCVFKA-GEVEKGRMIFEDIRSYGFLPDVRSYSILIH 437
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
+ G +T + +MK + +V+GF K A ++ E++ + P
Sbjct: 438 GLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQP 497
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
TY +I++ +I +A +F E + KG + VV YSS++ +GK GRI +A ++
Sbjct: 498 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 557
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVISAYNMA 302
+M KG PNV+ +NSL+D +A+ + + Y+ +I+
Sbjct: 558 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 617
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++++ F+ + + G V + M+ +K+ I +
Sbjct: 618 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 657
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 126/270 (46%), Gaps = 4/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ ++K+ G+ D Y ++ K G + LF + E+ + + + Y +
Sbjct: 137 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER---SVPCAYAYNTMIM 193
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G +GR + K ++E+G + + S++ +V A LF E +K
Sbjct: 194 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 252
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + ++ M G VE+ +++ M++A L + ++V+ K R A K++
Sbjct: 253 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 312
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E +GC P VTY S+I+ + G +A ++F +M G + V Y+S++ +
Sbjct: 313 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 372
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR D ++ ++ +GC+P++ + N+ MD
Sbjct: 373 GRKEDGHKVFKELIRRGCKPDLTLLNTYMD 402
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 4/264 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ MK G LD+ Y +++ F K G K + E + + + T ++ Y + D
Sbjct: 452 FHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT---YGAIVDG 508
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K R E F + K KGI + +Y+SLI F + + A + +E +KG+ +
Sbjct: 509 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 568
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ ++ + + L +SMK + + +++NG + + Y A ++
Sbjct: 569 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 628
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ QG +P VTY ++I+ ++G + A +F + G ++++++
Sbjct: 629 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN 688
Query: 250 RIRDAMR-LVAKMKPKGCEPNVWI 272
R +A + V ++ C N +
Sbjct: 689 RAMEAYQTTVYQLSSSSCSWNFLV 712
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 14/285 (4%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
+ L +M+ G + + ++ A + G AL E + L+ +
Sbjct: 61 PERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLE---PDIVL 117
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D GK+G KFF ++K +G+ D Y S+I + AEELF + E
Sbjct: 118 YNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 177
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSK 177
+ + + +++ Y G E +++E ++ CI V I+ K
Sbjct: 178 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRE-----RGCIPSVVSFNSILTCLGK 232
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+R A+ ++E ++ + P TY II+ C G +A ++ EM+ ++
Sbjct: 233 KRKVDEALSLFE-VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 291
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+ MV K ++ +A ++ +GC P+ Y SL+D G+
Sbjct: 292 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 336
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P Y +I A +A ++ +MQ+ G++ V ++++V + G++ DA+ L
Sbjct: 43 PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 102
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
V ++K EP++ +YN +D G+A N+ DM KF++E +
Sbjct: 103 VDEVKGSCLEPDIVLYNVCIDCFGKAGNV-------------------DMACKFFHELKA 143
Query: 318 NGGVIDRAMAGIMVGVFSK---LSQIEEL 343
G D M+ V K L + EEL
Sbjct: 144 QGLKPDDVSYTSMIWVLCKAGRLGEAEEL 172
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V++ ++ R A+++ Q+ G G + +++ A R G + A + E++
Sbjct: 50 VLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGS 109
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+ +V Y+ + +GK G + A + ++K +G +P+ Y S++ + +A L +
Sbjct: 110 CLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEA 169
Query: 290 EK----------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
E+ Y T+I Y A F+ K R G
Sbjct: 170 EELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 215
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 117/226 (51%), Gaps = 1/226 (0%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ Y +L SL S R E L ++M+E GI + Y LI S S + + A EL
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+ EKG++ ++ + L+ Y + GM+E ++VVE M++ +L+ + ++ G+ K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A+ V +++ + +P VTY S+I+ CR G + A ++ M +G
Sbjct: 441 SNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y+SM+ K+ R+ +A L ++ KG PNV +Y +L+D + +A
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 113/249 (45%), Gaps = 1/249 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + DSL KS R E F +++KG+ + +Y +LI + +V A + ++
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
K L + F L+ +G +++ + E M L + ++++ K +
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++Q++S G P TY + I YCR G AE + +M++ G + YSS++
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
YG G+ A ++ +M+ GCEP+ + SL+ K +Q + + NM
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739
Query: 303 REFDMCVKF 311
EFD V+
Sbjct: 740 -EFDTVVEL 747
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 14/292 (4%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-----CESRKLDLT 56
N + Y K+ AG+ D Y ++ + + D + +F E C ++
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV--- 289
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
+ TH+ LC + R E + F MK+ Y LI S A
Sbjct: 290 -AYTHLIHGLC----VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L KE EE G+ ++ + L+ + EK E++ M L + ++NG+
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
KR AV V E + S+ P TY +I YC+ ++ KA V +M ++ VV
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVV 463
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
Y+S++ ++G A RL++ M +G P+ W Y S++D ++K + +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 142/335 (42%), Gaps = 18/335 (5%)
Query: 23 GCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKF 82
GCY ++ + + G +++ +++E K+ P+ + Y + + K G E ++
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKV--CPN-IYTYNKMVNGYCKLGNVEEANQY 240
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
+ E G+ D Y SLI + ++ A ++F E KG R+ + L+
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
+++ +++ MK+ E + V++ A+ + +++ G P T
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y +I++ C + KA ++ +M +KG V+ Y++++ Y K G I DA+ +V M+
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 263 PKGCEPNVWIYNSLMDMHGRA---------------KNLRQLEKYTTVISAYNMAREFDM 307
+ PN YN L+ + ++ K L + Y ++I + FD
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ + G V D+ M+ K ++EE
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 8/217 (3%)
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDP-----SVYASLICSFASIAEVKVAEELFKEA 121
CDS+G A +L R M + E Y +L+ S A V ++++ E
Sbjct: 153 CDSVGD---ALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEM 209
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E + ++ + K+V Y + G VE+ + V + A L+ ++ G+ +R+
Sbjct: 210 LEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDL 269
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+A KV+ ++ +GC +V Y +I+ C +A +F++M+ V Y+ +
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ + R +A+ LV +M+ G +PN+ Y L+D
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 101/261 (38%), Gaps = 21/261 (8%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
EKM G+ ++ K GD + + F + S T H Y +
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG---TKPDAHTYTTFIQTY 647
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ GR + M+E G+ D Y+SLI + + + A ++ K + G
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
FL L+ +E MK + S+ C + N + V++ E+
Sbjct: 708 HTFLSLIKHLLE-------------MKYGKQKGSEPELCAMSNMME----FDTVVELLEK 750
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ-KGFDKCVVAYSSMVAMYGKTG 249
++ P +Y +I C +G AEKVF MQ+ +G + ++++++ K
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 250 RIRDAMRLVAKMKPKGCEPNV 270
+ +A ++V M G P +
Sbjct: 811 KHNEAAKVVDDMICVGHLPQL 831
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 128/275 (46%), Gaps = 3/275 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
LH+++K+ + G LD Y ++ K+G+++ L + + L MY
Sbjct: 280 HQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGK---LVQPDVVMY 336
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ D + K + + + K I D Y +LI F + ++K A +LF +
Sbjct: 337 NTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTS 396
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
K ++ D+ F LV + ++G +++ V+ M + +++G+
Sbjct: 397 KNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNK 456
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ + +G +Y +IN +C+I + +A K+F EM K V+ YSS++
Sbjct: 457 AESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLID 516
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+GRI A+ LV +M +G +P++ YNS++D
Sbjct: 517 GLCKSGRISYALELVDEMHYRGQQPDIITYNSILD 551
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 102/261 (39%), Gaps = 38/261 (14%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M I D Y +M+ + + + K ++F R + ++ Y I+ + K
Sbjct: 429 MMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGV---TANVQSYNIMINGFCK 485
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
E +K F++M K I D Y+SLI + A EL E +G D+
Sbjct: 486 IKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIIT 545
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ N+ I++ K+ A+ + +L
Sbjct: 546 Y------------------------NS-----------ILDALCKKHHVDKAITLLTKLK 570
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
QG P TY ++ C+ G A KVF ++ KG++ V AY+ M+ + G
Sbjct: 571 GQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFD 630
Query: 253 DAMRLVAKMKPKGCEPNVWIY 273
+A+ L++KM+ GC P+ Y
Sbjct: 631 EALALLSKMEENGCIPDAKTY 651
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 101/269 (37%), Gaps = 54/269 (20%)
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+ + L F + G D Y +LI + E K A EL + + K + D
Sbjct: 277 GQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPD---- 332
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
V+MY I++G K + A +Y + +S
Sbjct: 333 ---VVMY----------------------------NTIIDGMCKDKHVNDAFDLYSEKVS 361
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+ P TY ++I+ +C +G A +F +M K V +S +V + K G I++
Sbjct: 362 KRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKE 421
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYN 313
A ++A M + +P+V Y+SLMD Y + E + +N
Sbjct: 422 AKNVLAMMMKQSIKPDVVTYSSLMD-------------------GYCLVNEVNKAESIFN 462
Query: 314 EFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
G + IM+ F K+ ++E
Sbjct: 463 TMSHRGVTANVQSYNIMINGFCKIKMVDE 491
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 3/222 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M G+ + Y ++ F KI ++ LF E +++ P Y L D
Sbjct: 461 FNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQI--FPDVI-TYSSLIDG 517
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR L+ +M +G D Y S++ + V A L + + +G+ D
Sbjct: 518 LCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPD 577
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + LV + G +E +V E + N+ V++ GF + + A+ +
Sbjct: 578 MNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLS 637
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ GCIP TY II + AEK+ EM +G
Sbjct: 638 KMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 146/288 (50%), Gaps = 15/288 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD------LTPSSTHMY 63
+ ++ G ++ Y ++ A+ + G+ E+ +R LD L P++T
Sbjct: 669 FRDLQQHGFAGNTSAYSALLSAYAETGNFERA--------TRALDNMVAAGLQPNATCAN 720
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+L ++ G++G+A EI +FF+ + E GI + + + +F+ ++ A ++++ +E
Sbjct: 721 YVL-EAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKE 779
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G ++VF L+ +Y E + E+V+ +K A L + I +++ +SK +Y
Sbjct: 780 AGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRN 839
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A V++ + GC P T+ ++I Y R + +A+ + EM + G + Y+++++
Sbjct: 840 AALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLIS 899
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
YG+ DA + + GC+P+ YN +++++ +A R++E+
Sbjct: 900 AYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEE 947
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 134/272 (49%), Gaps = 3/272 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M +AG+ ++ C ++EAF + G +++++ F ++ ++P+S + ++ +
Sbjct: 705 DNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLP--EMGISPNS-RTFVVIFHAF 761
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G E +R MKE G V+ +L+ ++ AEEL K+ ++ G+ D+
Sbjct: 762 SRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDI 821
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+++ ++ +Y + G V + M+ + ++ +S+ + A + +
Sbjct: 822 DIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLRE 881
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I G P TY ++I+AY R+ Y AE VF + + G AY+ M+ +Y K G
Sbjct: 882 MIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGE 941
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
R ++ +MK G EP++ + LMD +G+
Sbjct: 942 HRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGK 973
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 133/280 (47%), Gaps = 9/280 (3%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+++++ GI +S + I AF + G+ E+ +++ + ++ +PS ++K L
Sbjct: 738 FFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQM--KEAGFSPS-IQVFKALLA 794
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ + + +D+K+ G+ D +Y +I ++ + + A +FK +E G
Sbjct: 795 LYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSP 854
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESM---KNAELNISDCISCVIVNGFSKRRAYWAAV 185
D F L+++Y MV++ ++ M NA NIS + +++ + + +AY A
Sbjct: 855 DATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAP-NISTYTT--LISAYGRLQAYEDAE 911
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
V++ + GC P Y +IN Y + G + K E++ +M+ GF+ + ++ Y
Sbjct: 912 LVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSY 971
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
GK G A ++ + G P+ Y S+++ H K+
Sbjct: 972 GKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKD 1011
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 142/339 (41%), Gaps = 29/339 (8%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
CYC+ AF L ++C D+ S+ H+ I K + EI+ F
Sbjct: 620 CYCRKGFAFV-------AHELLIDC-LHAFDVKDSAMHVAIIASYGKLKLWQNAEIV--F 669
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
RD+++ G + S Y++L+ ++A + A G+ + ++ +
Sbjct: 670 RDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRA 729
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G ++ E + + ++ + VI + FS+ A +Y Q+ G P +
Sbjct: 730 GKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVF 789
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+++ Y R + AE++ ++++ G + + Y+ M+++Y K G R+A + M+
Sbjct: 790 KALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQE 849
Query: 264 KGCEPNVWIYNSLMDMHGRAK----------------NLRQLEKYTTVISAYNMAREFDM 307
GC P+ +N+L+ ++ R + N + YTT+ISAY + ++
Sbjct: 850 IGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYED 909
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ---IEEL 343
+ G D +M+ V+ K + IEE+
Sbjct: 910 AELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEI 948
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 124/272 (45%), Gaps = 2/272 (0%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ G D + +++A + G E +A+ L+ + L P T Y L +
Sbjct: 150 RMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQ-DVYAAGLRPD-TITYNTLISACS 207
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ R + + F +M+ +G D Y ++I + V+ A +F+ +E+G D
Sbjct: 208 LNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAV 267
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ ++ + +G +E+ + M++A + + +++ + K + A ++Y Q+
Sbjct: 268 TYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQM 327
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+G P VT+ +I+ + G ++A +F +M + + A+S+M+ Y K
Sbjct: 328 KEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMF 387
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
DA + M G P++ Y+ ++D+ +A
Sbjct: 388 TDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKA 419
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 123/261 (47%), Gaps = 3/261 (1%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
++ ++ + G ++ A FL+ + L++ + ++C + G AF + D
Sbjct: 582 LVASYDRAGMQDEALARFLDMTTEGLEMD-AEVLQTAVMC--YCRKGFAFVAHELLIDCL 638
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
++D +++ ++I S+ + + AE +F++ ++ G + + L+ Y E G E
Sbjct: 639 HAFDVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFE 698
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ +++M A L + + ++ F + + +++L G P T+ I
Sbjct: 699 RATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIF 758
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
+A+ R G +A ++ +M++ GF + + +++A+Y + DA LV +K G E
Sbjct: 759 HAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLE 818
Query: 268 PNVWIYNSLMDMHGRAKNLRQ 288
++ IYN ++ ++ + + R
Sbjct: 819 LDIDIYNHMISLYSKLGSYRN 839
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 36/268 (13%)
Query: 55 LTPS-STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
+ PS + H+YK L L K+GR E + R + G ++ L+ S+
Sbjct: 535 IEPSVAAHLYKRLAVMLAKAGRFSEAEEEMRTSQTYGQVQVSDFLKVLVASYDRAGMQDE 594
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A F + +G+ D EV V+ Y +G E+ + DC+ V
Sbjct: 595 ALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHEL----------LIDCLHAFDVK 644
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+ +II +Y ++ L+ AE VF ++QQ GF
Sbjct: 645 D-------------------------SAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAG 679
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYT 293
AYS++++ Y +TG A R + M G +PN N +++ GRA +++ ++
Sbjct: 680 NTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFF 739
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGV 321
+ ++ V ++ F NG +
Sbjct: 740 QRLPEMGISPNSRTFVVIFHAFSRNGNL 767
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 14/218 (6%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + G++GR FR M+E+G D Y S++ +FA ++ E +
Sbjct: 234 YNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERI----- 288
Query: 123 EKGMLRDLE------VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGF 175
+GM+RD + ++ MY + GM K E+ MK E D ++ V+++
Sbjct: 289 -RGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKE-EGRCPDSVTFTVLIDTL 346
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A ++E ++ P ++++I AY + +++ AE + M + G +
Sbjct: 347 GKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDL 406
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
+AYS M+ ++ K G + L M G +P + +Y
Sbjct: 407 LAYSVMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVY 444
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 101/236 (42%), Gaps = 3/236 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M+ G D Y ++ + + G E +++F + + TP + Y + +
Sbjct: 219 FEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQ--GFTPDAV-TYNSVLHA 275
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ GR E+ + M++ D Y ++I + + AEEL+ + +E+G D
Sbjct: 276 FARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPD 335
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F L+ + G V + + E M +++ + ++ ++K + A Y
Sbjct: 336 SVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYS 395
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++ G P + Y+ +++ + + G+ K ++ M G + Y+ MV ++
Sbjct: 396 CMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVF 451
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 180 AYWAAVKVYEQL-ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
++ A+++YE L +++ P A +++ R A+++F + + CV Y
Sbjct: 70 SWQRALELYECLNVARWYAPNPRMLAVMLSVLGRANQPGLAQELF-DRAESSIGNCVQVY 128
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR---------------- 282
+S++++Y + G +L+ +M+ +GC P++ +N ++ R
Sbjct: 129 NSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVY 188
Query: 283 AKNLRQLE-KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
A LR Y T+ISA ++ + + E + G D M+ V+ + ++E
Sbjct: 189 AAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVE 248
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 89/220 (40%), Gaps = 11/220 (5%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSS-THMYKILCD 68
M+ G D+ Y ++ AF + G + E++ + + ++T ++ HMY
Sbjct: 257 MQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMY----- 311
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
GK+G + + + MKE+G D + LI + V A +F++ + +
Sbjct: 312 --GKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRP 369
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
L+ F ++ Y + M M A + V+++ F K + +Y
Sbjct: 370 TLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILY 429
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+ ++ G P YA ++ + + ++ E + EM Q
Sbjct: 430 KAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSKEMVQ 469
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 154/340 (45%), Gaps = 35/340 (10%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M S G + D+ Y +++ + ++ KV FL E K + Y IL DS
Sbjct: 470 EMMSKGFIPDTSTYSKVIGL---LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G + K+F +M G + Y +LI ++ ++ A ELF+ +G + ++
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMK-NAEL------------NISDC---ISCVIVNGF 175
+ L+ + + G +EK ++ M+ NA++ NI D +V+G
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A + + + +GC P + Y ++I+ +C++G +A+ VF +M ++G+ V
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL--- 289
YSS++ K R+ A++++++M C PNV IY ++D G+ +L
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766
Query: 290 --EK--------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
EK YT +I + A + D C++ + G
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 159/396 (40%), Gaps = 66/396 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--------------------CE 49
+E+MKS +V D Y ++++F K+G ++ F E +
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562
Query: 50 SRKLDLTPSSTHM------------YKILCDSLGKSGRAFEILKFFRDMK---------- 87
+RK+ M Y L D KSG+ + + + M+
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622
Query: 88 ----EKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
+ G + DP++ Y +L+ +VK A +L +G + V+ L+ +
Sbjct: 623 YFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ G +++ V M + +++ K + A+KV +++ C P +
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVI 742
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
Y +I+ C++G +A ++ M++KG VV Y++M+ +GK G++ + L+ +M
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802
Query: 262 KPKGCEPNVWIYNSLM----------DMHGRAKNLRQ------LEKYTTVISAYNMAREF 305
KGC PN Y L+ D H ++Q + Y VI +N REF
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFN--REF 860
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ + +E N V I++ F K ++E
Sbjct: 861 IISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 119/300 (39%), Gaps = 39/300 (13%)
Query: 57 PSSTHMYKILCDSLGKS--GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
P+ +LC L K GR IL M +G ++ SLI ++ + A
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSM---MITEGCYPSRRIFNSLIHAYCRSGDYSYA 388
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA------------ELN 162
+L K+ + G V+ +++ I +L+V+E + A ++N
Sbjct: 389 YKLLKKMGDCGCQPGYVVY-NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447
Query: 163 ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
+S+ C+ G + A + +++S+G IP TY+ +I C A +
Sbjct: 448 VSNLARCLCGAG-----KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLL 502
Query: 223 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
F EM+ V Y+ ++ + K G ++ A + +M GC PNV Y +L+ + +
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562
Query: 283 AKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
A+ + + YT +I + + + + + Y R N + D M
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 9/198 (4%)
Query: 86 MKEKGILED----PS--VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
++E G L+D PS Y +L+ F + A + +E + G D V +
Sbjct: 217 LEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHL 276
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G + L ++E E + I +++G + + A+ ++ S CIP
Sbjct: 277 LCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPN 333
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY ++ R + +++ M +G ++S++ Y ++G A +L+
Sbjct: 334 VVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLK 393
Query: 260 KMKPKGCEPNVWIYNSLM 277
KM GC+P +YN L+
Sbjct: 394 KMGDCGCQPGYVVYNILI 411
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 7/271 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM--YKILC 67
++ M + G D Y I+ KIG++ A L +K++ +M Y L
Sbjct: 186 FDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLL-----KKMEEAGCQPNMVTYSTLI 240
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
DSL + E L F MK KGI D Y SLI + K A L E ++
Sbjct: 241 DSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIM 300
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ F LV + +EG V + L V+++M + + ++ G+S A K+
Sbjct: 301 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKL 360
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ +I++GC P +Y +IN YC+ +A ++F EM +G V+Y++++ + +
Sbjct: 361 FHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQ 420
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G++R+A L M G P+++ Y+ L+D
Sbjct: 421 LGKLREAQDLFRNMCTNGNLPDLFTYSILLD 451
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 133/272 (48%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + MK+ GI D Y +++ K ++ +AL E S L++ P + +L
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTS--LNIMPDIV-TFNVL 309
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K G+ E L + M E G+ + Y+SL+ ++ +V A +LF KG
Sbjct: 310 VDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGC 369
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L+ Y + +++ +++ M + L ++ +++GF + A
Sbjct: 370 KPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQD 429
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ + + G +P TY+ +++ +C+ G KA ++F MQ +V Y+ +V
Sbjct: 430 LFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMC 489
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+G +DA +L +++ +G +P+V +Y ++++
Sbjct: 490 KSGNHKDARKLFSELFVQGLQPHVQLYTTIIN 521
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 100/203 (49%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL + K+ R E ++ F +M +G+ + Y +LI F + +++ A++LF+
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMC 435
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G L DL + L+ + ++G + K + +M++ L + + ++V+ K +
Sbjct: 436 TNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHK 495
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K++ +L QG P Y +IIN C+ GL +A + F M+ G ++Y+ ++
Sbjct: 496 DARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVII 555
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ A+ LV +M+ +G
Sbjct: 556 RGLLQHKDESRALLLVGEMRDRG 578
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 126/335 (37%), Gaps = 61/335 (18%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
C+CQ+ KV KL L P+ + L + L K G + ++ F
Sbjct: 137 CFCQLQRVDLGFSVLAKVI---------KLGLQPTIV-TFTTLINGLCKVGEFAQAVELF 186
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
DM KG D Y ++I I E A L K+ EE G ++ + L+ +
Sbjct: 187 DDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRD 246
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
+V + L++ MK ++G P TY
Sbjct: 247 RLVNEALDIFSYMK-----------------------------------AKGISPDIFTY 271
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
S+I C+ + +A + EM +V ++ +V + K G++ +A+ ++ M
Sbjct: 272 TSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTE 331
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDM 307
G EPNV Y+SLM + ++ + K Y +I+ Y A+ D
Sbjct: 332 MGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDE 391
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++ +NE G + ++ F +L ++ E
Sbjct: 392 AMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLRE 426
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+ +N F + + V ++I G P VT+ ++IN C++G +++A ++F +M K
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G V Y++++ K G A L+ KM+ GC+PN+ Y++L+D
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLID 241
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 154/340 (45%), Gaps = 35/340 (10%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M S G + D+ Y +++ + ++ KV FL E K + Y IL DS
Sbjct: 470 EMMSKGFIPDTSTYSKVIGL---LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G + K+F +M G + Y +LI ++ ++ A ELF+ +G + ++
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMK-NAEL------------NISDC---ISCVIVNGF 175
+ L+ + + G +EK ++ M+ NA++ NI D +V+G
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A + + + +GC P + Y ++I+ +C++G +A+ VF +M ++G+ V
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL--- 289
YSS++ K R+ A++++++M C PNV IY ++D G+ +L
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766
Query: 290 --EK--------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
EK YT +I + A + D C++ + G
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 159/396 (40%), Gaps = 66/396 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--------------------CE 49
+E+MKS +V D Y ++++F K+G ++ F E +
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562
Query: 50 SRKLDLTPSSTHM------------YKILCDSLGKSGRAFEILKFFRDMK---------- 87
+RK+ M Y L D KSG+ + + + M+
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622
Query: 88 ----EKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
+ G + DP++ Y +L+ +VK A +L +G + V+ L+ +
Sbjct: 623 YFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ G +++ V M + +++ K + A+KV +++ C P +
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVI 742
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
Y +I+ C++G +A ++ M++KG VV Y++M+ +GK G++ + L+ +M
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802
Query: 262 KPKGCEPNVWIYNSLM----------DMHGRAKNLRQ------LEKYTTVISAYNMAREF 305
KGC PN Y L+ D H ++Q + Y VI +N REF
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFN--REF 860
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ + +E N V I++ F K ++E
Sbjct: 861 IISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 119/300 (39%), Gaps = 39/300 (13%)
Query: 57 PSSTHMYKILCDSLGKS--GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
P+ +LC L K GR IL M +G ++ SLI ++ + A
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSM---MITEGCYPSRRIFNSLIHAYCRSGDYSYA 388
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA------------ELN 162
+L K+ + G V+ +++ I +L+V+E + A ++N
Sbjct: 389 YKLLKKMGDCGCQPGYVVY-NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447
Query: 163 ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
+S+ C+ G + A + +++S+G IP TY+ +I C A +
Sbjct: 448 VSNLARCLCGAG-----KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLL 502
Query: 223 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
F EM+ V Y+ ++ + K G ++ A + +M GC PNV Y +L+ + +
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562
Query: 283 AKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
A+ + + YT +I + + + + + Y R N + D M
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 9/198 (4%)
Query: 86 MKEKGILED----PS--VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
++E G L+D PS Y +L+ F + A + +E + G D V +
Sbjct: 217 LEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHL 276
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G + L ++E E + I +++G + + A+ ++ S CIP
Sbjct: 277 LCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPN 333
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY ++ R + +++ M +G ++S++ Y ++G A +L+
Sbjct: 334 VVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLK 393
Query: 260 KMKPKGCEPNVWIYNSLM 277
KM GC+P +YN L+
Sbjct: 394 KMGDCGCQPGYVVYNILI 411
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKE--KGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y+IL DS K+GR L+ ++M D +Y+SLI S + ++V A EL+ +
Sbjct: 882 YRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYAD 941
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
++G + +L +F LV I E+ L+ +SDCI C +V+
Sbjct: 942 MIKRGGIPELSIFFYLVKGLIRINRWEEALQ-----------LSDCI-CQMVH 982
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 131/275 (47%), Gaps = 3/275 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ G + D Y ++ + ++G+ ++V L E + + L P + + +L L
Sbjct: 278 QMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILL---LC 334
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G+ E + R+M +GI D +Y +LI F + V A LF E +++ + D
Sbjct: 335 KTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFI 394
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ ++ + G V + ++ M L + +++G+ K A ++ Q+
Sbjct: 395 TYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 454
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ G P VTY ++ + C+ G A ++ EM +KG + + Y+S+V K G I
Sbjct: 455 LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNI 514
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
A++L+ M+ G P+ Y +LMD + +++ +
Sbjct: 515 DQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 549
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 153/373 (41%), Gaps = 54/373 (14%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M S GI D Y +++ F K+G+ LF E + RK+ +P ++C L
Sbjct: 348 EMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKI--SPDFITYTAVIC-GLC 404
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLI----------------------------C 103
++GR E K F +M K + D Y +LI
Sbjct: 405 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIV 464
Query: 104 SFASIA-------EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
++ ++A EV A EL E KG+ ++ + LV + G +++ +++++ M
Sbjct: 465 TYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM 524
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ A + +++ + K R A ++ Q++ + P VT+ ++N +C G+
Sbjct: 525 EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 584
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
EK+ M +KG Y+S++ Y +R + M KG P+ YN L
Sbjct: 585 EDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL 644
Query: 277 MDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGG 320
+ H +A+N+++ + Y +I + ++F + + + R G
Sbjct: 645 IKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGL 704
Query: 321 VIDRAMAGIMVGV 333
V DR + I +
Sbjct: 705 VADREIYNIFADI 717
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 112/220 (50%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+T Y I+ SL + GR E + M+ +G + D Y+++I + + E++ +L
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E + KG+ + + ++L+ + G V + V+ M + + I +++GF K
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+A ++++++ + P +TY ++I C+ G +A+K+F EM K + V Y
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++++ Y K G++++A L +M G PN+ Y +L D
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALAD 471
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 124/271 (45%), Gaps = 3/271 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G+ + Y + + K G+ + L E + L+L + + Y L +
Sbjct: 451 HNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL---NIYTYNSLVNG 507
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G + +K +DM+ G D Y +L+ ++ E+ A EL ++ ++ +
Sbjct: 508 LCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 567
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ + GM+E ++++ M + + ++ + R A ++Y
Sbjct: 568 VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYR 627
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ ++G +P TY +I +C+ +A + +M KGF+ V +Y++++ + K
Sbjct: 628 GMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRK 687
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ +A L +M+ +G + IYN D++
Sbjct: 688 KFLEARELFEQMRREGLVADREIYNIFADIN 718
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS-DCISCVIVNGFSKRRAYWAAVKV 187
D VF + +E GM+++ ++ + M N L IS D + I + A+KV
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKV 240
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ + G +Y I ++ C++G +A ++ ++M+ +G V++YS+++ Y +
Sbjct: 241 FVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQ 300
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G ++ ++L+ +M+ KG +PN + YN ++
Sbjct: 301 VGELQRVLKLIEEMQIKGLKPNPYTYNGVI 330
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 154/340 (45%), Gaps = 35/340 (10%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M S G + D+ Y +++ + ++ KV FL E K + Y IL DS
Sbjct: 470 EMMSKGFIPDTSTYSKVIGL---LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G + K+F +M G + Y +LI ++ ++ A ELF+ +G + ++
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMK-NAEL------------NISDC---ISCVIVNGF 175
+ L+ + + G +EK ++ M+ NA++ NI D +V+G
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A + + + +GC P + Y ++I+ +C++G +A+ VF +M ++G+ V
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL--- 289
YSS++ K R+ A++++++M C PNV IY ++D G+ +L
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766
Query: 290 --EK--------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
EK YT +I + A + D C++ + G
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 159/396 (40%), Gaps = 66/396 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--------------------CE 49
+E+MKS +V D Y ++++F K+G ++ F E +
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562
Query: 50 SRKLDLTPSSTHM------------YKILCDSLGKSGRAFEILKFFRDMK---------- 87
+RK+ M Y L D KSG+ + + + M+
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622
Query: 88 ----EKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
+ G + DP++ Y +L+ +VK A +L +G + V+ L+ +
Sbjct: 623 YFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ G +++ V M + +++ K + A+KV +++ C P +
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVI 742
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
Y +I+ C++G +A ++ M++KG VV Y++M+ +GK G++ + L+ +M
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802
Query: 262 KPKGCEPNVWIYNSLM----------DMHGRAKNLRQ------LEKYTTVISAYNMAREF 305
KGC PN Y L+ D H ++Q + Y VI +N REF
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFN--REF 860
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ + +E N V I++ F K ++E
Sbjct: 861 IISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 119/300 (39%), Gaps = 39/300 (13%)
Query: 57 PSSTHMYKILCDSLGKS--GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
P+ +LC L K GR IL M +G ++ SLI ++ + A
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSM---MITEGCYPSRRIFNSLIHAYCRSGDYSYA 388
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA------------ELN 162
+L K+ + G V+ +++ I +L+V+E + A ++N
Sbjct: 389 YKLLKKMGDCGCQPGYVVY-NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447
Query: 163 ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
+S+ C+ G + A + +++S+G IP TY+ +I C A +
Sbjct: 448 VSNLARCLCGAG-----KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLL 502
Query: 223 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
F EM+ V Y+ ++ + K G ++ A + +M GC PNV Y +L+ + +
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLK 562
Query: 283 AKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
A+ + + YT +I + + + + + Y R N + D M
Sbjct: 563 ARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 9/198 (4%)
Query: 86 MKEKGILED----PS--VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
++E G L+D PS Y +L+ F + A + +E + G D V +
Sbjct: 217 LEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHL 276
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G + L ++E E + I +++G + + A+ ++ S CIP
Sbjct: 277 LCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPN 333
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY ++ R + +++ M +G ++S++ Y ++G A +L+
Sbjct: 334 VVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLK 393
Query: 260 KMKPKGCEPNVWIYNSLM 277
KM GC+P +YN L+
Sbjct: 394 KMGDCGCQPGYVVYNILI 411
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKE--KGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y+IL DS K+GR L+ ++M D +Y+SLI S + ++V A EL+ +
Sbjct: 882 YRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYAD 941
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
++G + +L +F LV I E+ L+ +SDCI ++V+ R
Sbjct: 942 MIKRGGIPELSIFFYLVKGLIRINRWEEALQ-----------LSDCICQMMVDFV--REG 988
Query: 181 YWAAVKVYEQLISQGCIPGQVTYAS 205
+ + YE L C T+AS
Sbjct: 989 FLGSSHDYEFLNWTLC---STTWAS 1010
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 138/303 (45%), Gaps = 6/303 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M AGI D Y ++ K G + +F E R L+ +T + L D+ K
Sbjct: 303 MAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN---PNTVVLTTLIDAHCK 359
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G L+ +M +G+ D Y +L+ F + ++K A ++ +E + G+ D
Sbjct: 360 EGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVT 419
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ +EG ++ +E+ + M + + + D +++G SK A ++ +++
Sbjct: 420 YTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMM 479
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P TY +I+A+C+ G K EMQ KG + +V Y+ ++ + G+++
Sbjct: 480 EAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMK 539
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFY 312
+A L+ M G PN YN L+D H + +R E+ SA M +F +
Sbjct: 540 NADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELK---SAKGMVSDFGVYTSLI 596
Query: 313 NEF 315
NEF
Sbjct: 597 NEF 599
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/221 (18%), Positives = 95/221 (42%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + +L + +SG+ F +M +G+ + +L+ +++ A
Sbjct: 239 PPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANA 298
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L + G+ D+ + + + G ++ +E+ E M LN + + +++
Sbjct: 299 LRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHC 358
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A +++ ++ ++G V Y +++N +CR+ A + EM++ G V
Sbjct: 359 KEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKV 418
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y++++ K G + AM + +M +G + Y +L+
Sbjct: 419 TYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALI 459
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 173/413 (41%), Gaps = 78/413 (18%)
Query: 6 KLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-----------CESRKLD 54
K+ + S I++D C +EA K+ DS K A LF C++++LD
Sbjct: 404 KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLD 463
Query: 55 -------------LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASL 101
TP S + L D LG+ G+ + + M + G + VY SL
Sbjct: 464 EACSIFLGLDHKVCTPDSV-TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSL 522
Query: 102 I------------------------------------CSFASIAEVKVAEELFKEAEEKG 125
I C F + E++ LF+E + +G
Sbjct: 523 IRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKA-GEIEKGRALFEEIKAQG 581
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D+ + L+ ++ G + T ++ MK L++ ++++GF K A
Sbjct: 582 LTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAY 641
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++ E++ ++G P VTY S+I+ +I +A +F E + K D VV YSS++ +
Sbjct: 642 QLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGF 701
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------KNLRQLE----- 290
GK GRI +A ++ ++ KG PN + +N L+D +A +N++ L+
Sbjct: 702 GKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNE 761
Query: 291 -KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ +++ R+F+ F+ E + G + M+ +++ + E
Sbjct: 762 VTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLE 814
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 132/269 (49%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E++K+ G+ D Y ++ K G S+ LF E + + L L T Y I+ D
Sbjct: 574 FEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHL---DTRAYNIVIDG 630
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KSG+ + + +MK KG+ Y S+I A I + A LF+EA+ K + +
Sbjct: 631 FCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLN 690
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ V+ L+ + + G +++ ++E + L + +++ K A+ ++
Sbjct: 691 VVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQ 750
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + C P +VTY+ ++N C++ ++KA + EMQ++G + Y++M++ + G
Sbjct: 751 NMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVG 810
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +A L + K G P+ YN++++
Sbjct: 811 NVLEAKDLFERFKSSGGIPDSACYNAMIE 839
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 18/282 (6%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
AF +++ R K + S Y +LI + ++ E L ++ +E G + +F
Sbjct: 186 AFGVIETMRKFKFRPAY---SAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTT 242
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
L+ ++ EG V+ L +++ MK+ N + V ++ F K A K + +L SQG
Sbjct: 243 LICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQG 302
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
+P VT+ S+I C+ +A ++F E+ CV AY++M+ YG G+ +A
Sbjct: 303 LVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAY 362
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRA----KNLRQLE-----------KYTTVISAYN 300
L+ + K KGC P+V YN ++ GR + LR LE Y +I
Sbjct: 363 SLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLC 422
Query: 301 MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
A E + +K + + G + IM+ K +++E
Sbjct: 423 KAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDE 464
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 121/258 (46%), Gaps = 4/258 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+YE MK G+ LD+ Y +++ F K G K L E +++ L T + Y + D
Sbjct: 609 FYE-MKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVT---YGSVID 664
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K R E F + K K + + VY+SLI F + + A + +E +KG+
Sbjct: 665 GLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 724
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ ++ +++ L ++MKN + ++ ++VNG K R + A +
Sbjct: 725 NTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFW 784
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ QG P +TY ++I+ R+G +A+ +F + G Y++M+
Sbjct: 785 QEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNA 844
Query: 249 GRIRDAMRLVAKMKPKGC 266
+ DA L + + KGC
Sbjct: 845 NKAMDAYILFEETRLKGC 862
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 6/277 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECES-RKLDLTPSSTHMYKILCDS 69
E+M AG + +++ +F K S K+ F E+ RK P+ + Y L +
Sbjct: 156 EEMSMAGFGPSNNTCIEMVASFVK---SRKLREAFGVIETMRKFKFRPAYS-AYTTLIGA 211
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + A +L R M+E G ++ +LIC FA V A L E + D
Sbjct: 212 LSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNAD 271
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L ++ + + + G V+ + +K+ L D ++ K AV+++E
Sbjct: 272 LVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFE 331
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L S +P Y ++I Y +G +++A + ++KG V+AY+ ++ G+ G
Sbjct: 332 ELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKG 391
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
++ +A+R++ MK PN+ YN L+DM +A L
Sbjct: 392 KVEEALRILEAMKMDAA-PNLTSYNILIDMLCKAGEL 427
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 120/270 (44%), Gaps = 4/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ ++KS G+V D + ++ K ++ LF E +S K + + Y +
Sbjct: 294 FFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNK---SVPCVYAYNTMIM 350
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G G+ E K KG + Y ++ +V+ A + EA +
Sbjct: 351 GYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIL-EAMKMDAAP 409
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+L + L+ M + G +E L+V +SMK A L + ++++ K + A ++
Sbjct: 410 NLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIF 469
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
L + C P VT+ S+I+ R G + A ++ +M G V Y+S++ + K
Sbjct: 470 LGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKC 529
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR D ++ +M +GC P++ + N+ MD
Sbjct: 530 GRKEDGHKIYKEMMHRGCSPDLMLLNNYMD 559
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 22/322 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M G D M+ +K G+ EK ALF E +++ LTP Y IL
Sbjct: 539 YKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQ--GLTPD-VRSYSILIHG 595
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G + + K F +MKE+G+ D Y +I F +V A +L +E + KG+
Sbjct: 596 LVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPT 655
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ + +++ + E K+ ++++ + +++GF K A + E
Sbjct: 656 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILE 715
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L+ +G P T+ +++A + +A F M+ V YS MV K
Sbjct: 716 ELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVR 775
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
+ A +M+ +G +PN Y +++ R N V+ A ++
Sbjct: 776 KFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGN---------VLEAKDL-------- 818
Query: 310 KFYNEFRMNGGVIDRAMAGIMV 331
+ F+ +GG+ D A M+
Sbjct: 819 --FERFKSSGGIPDSACYNAMI 838
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 131/280 (46%), Gaps = 16/280 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL---DLTPSST 60
+ L ++MKS D Y ++ F K+G + F E +S+ L D+T +S
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTS- 312
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA--SLICSFASIAEVKVAEELF 118
M +LC K+ R E ++ F ++ + P VYA ++I + S+ + A L
Sbjct: 313 -MIGVLC----KAERVDEAVELFEELDSNKSV--PCVYAYNTMIMGYGSVGKFNEAYSLL 365
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK-NAELNISDCISCVIVNGFSK 177
+ + KG + + + ++ +G VE+ L ++E+MK +A N++ ++++ K
Sbjct: 366 ERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTS--YNILIDMLCK 423
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
AA+KV + + G P +T +I+ C+ +A +F+ + K V
Sbjct: 424 AGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVT 483
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ S++ G+ G++ DA L KM G PN +Y SL+
Sbjct: 484 FCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLI 523
>gi|255557939|ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540762|gb|EEF42322.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 144/313 (46%), Gaps = 22/313 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK G L+S Y +++ Y+ K A +E E R++ + P H+Y + D+ G
Sbjct: 151 EMKQKGFQLNSFVYSKVI-GLYRDNGMWKKAIGIIE-EIREMGM-PLDKHIYNSIIDTFG 207
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G E L+ +M+++GI D + SLI + A ELF + + +G+ D +
Sbjct: 208 KYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKMQAQGLYPDPK 267
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ + ++ E+G E + MK+ S I ++V+ + + + A + L
Sbjct: 268 ILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGRFQDAEECISAL 327
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S+G +P + + NAY + GL + KV M+ +G + ++ + ++ +G GR
Sbjct: 328 KSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNVLINAFGIAGRH 387
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
R+A+ + MK G P+V Y++LM AY AR+FD +
Sbjct: 388 REALSIYHHMKESGISPDVVTYSTLM-------------------KAYIRARKFDEVPEI 428
Query: 312 YNEFRMNGGVIDR 324
Y+E +G D+
Sbjct: 429 YSEMESSGCTPDK 441
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 113/236 (47%), Gaps = 3/236 (1%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
K+GD +K L + +S L PSS Y L ++L GR E +++M G+
Sbjct: 33 KVGDVDKAMTLLADMQS--LGFHPSSLS-YTCLIETLLSVGRTLEAEALYQEMMCFGLKP 89
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+Y ++ F ++VAE + + ++ G+ R+ E + L+ + G +E T V+
Sbjct: 90 RLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDYNVNAGRLEDTWSVI 149
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
MK ++ + ++ + + A+ + E++ G + Y SII+ + +
Sbjct: 150 NEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLDKHIYNSIIDTFGKY 209
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
G +A +V MQQ+G +V ++S++ + K G + A+ L +KM+ +G P+
Sbjct: 210 GELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKMQAQGLYPD 265
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 88/227 (38%), Gaps = 38/227 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L M+ GI D + ++ K G+ K LF + +++ L P + +
Sbjct: 216 LEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKMQAQGLYPDPK---ILVTI 272
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L + G+ I + F MK G + ++YA L+ + + AEE + +G+
Sbjct: 273 ISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGRFQDAEECISALKSEGI 332
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS---------- 176
L +F L Y ++G+ E+T++V++ M+ + + + V++N F
Sbjct: 333 LPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNVLINAFGIAGRHREALS 392
Query: 177 -------------------------KRRAYWAAVKVYEQLISQGCIP 198
+ R + ++Y ++ S GC P
Sbjct: 393 IYHHMKESGISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESSGCTP 439
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
+Y S I C++G KA + +MQ GF ++Y+ ++ GR +A L +M
Sbjct: 23 SYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEAEALYQEM 82
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
G +P + +YN ++ + LR E+ ++ + R
Sbjct: 83 MCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHR 124
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 129/274 (47%), Gaps = 6/274 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ Y+ S G D CY ++ K+G + L + E K + P+ MY ++
Sbjct: 146 LNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKME--KGGVRPNLI-MYNMV 202
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K G E +M KGI D Y SLI F + + A L E K
Sbjct: 203 VDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKED 262
Query: 127 LR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAA 184
+R D+ F LV + GMV + V M L D +SC ++NG+ R A
Sbjct: 263 VRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLE-PDVVSCNALMNGWCLRGCMSEA 321
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+V+++++ +G +P ++Y+++IN YC++ + +A ++ EM Q+ V Y+ ++
Sbjct: 322 KEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDG 381
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+GR+ LV M+ G P++ YN L+D
Sbjct: 382 LSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLD 415
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 116/268 (43%), Gaps = 2/268 (0%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M GI +D Y ++ F G + L E ++ D+ P + + IL D+L
Sbjct: 220 SEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKE-DVRPD-VYTFNILVDAL 277
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G E F M ++G+ D +L+ + + A+E+F E+G L ++
Sbjct: 278 CKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNV 337
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ Y + MV++ L ++ M L +++G SK + E
Sbjct: 338 ISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEA 397
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + G P +TY +++ Y + KA +F + G + Y+ ++ K GR
Sbjct: 398 MRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGR 457
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ A + + KGC PN+ YN +++
Sbjct: 458 MKAAKEIFQLLSVKGCRPNIRTYNIMIN 485
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 101/228 (44%), Gaps = 3/228 (1%)
Query: 53 LDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASL-ICSFASIAEV 111
L PS + K+L S+ K+ ++ + KG + V S+ I S + ++
Sbjct: 49 LHPPPSIVSLNKLL-SSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQM 107
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+A + + ++G D L+ +G + L + + + + + +
Sbjct: 108 GLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTL 167
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+NG K A+++ ++ G P + Y +++ C+ GL ++A + EM KG
Sbjct: 168 INGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGI 227
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK-GCEPNVWIYNSLMD 278
V Y+S++ + G+ + A+RL+ +M K P+V+ +N L+D
Sbjct: 228 CIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVD 275
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 104/259 (40%), Gaps = 30/259 (11%)
Query: 92 LEDPSVYASLICSFASIAEVK-------VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
L P SL +SI + K + L + K L L +F+ + + G
Sbjct: 49 LHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMG 108
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ V+ + + ++ G + + A+ +Y+ +S+G +V Y
Sbjct: 109 L---AFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYG 165
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++IN C++G A ++ +M++ G ++ Y+ +V K G + +A L ++M K
Sbjct: 166 TLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGK 225
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV-ID 323
G +V+ YNSL +HG + A +F V+ NE M V D
Sbjct: 226 GICIDVFTYNSL--IHG-----------------FCGAGQFQGAVRLLNEMVMKEDVRPD 266
Query: 324 RAMAGIMVGVFSKLSQIEE 342
I+V KL + E
Sbjct: 267 VYTFNILVDALCKLGMVAE 285
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K E L+ +M ++ ++ D Y L+ + V +L +
Sbjct: 340 YSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMR 399
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G DL + L+ Y++ ++K L + + + + ++ + ++++G K
Sbjct: 400 ASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMK 459
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AA ++++ L +GC P TY +IN R GL +AE + +EM GF V + +V
Sbjct: 460 AAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLV 519
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 82/202 (40%), Gaps = 7/202 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G + + Y ++ + K+ ++ L E R +L P T Y L D
Sbjct: 325 FDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQR--NLVPD-TVTYNCLLDG 381
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR M+ G D Y L+ + + A LF+ + G+ +
Sbjct: 382 LSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPN 441
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVE--SMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + L+ + G ++ E+ + S+K NI +++NG + A +
Sbjct: 442 IRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIR--TYNIMINGLRREGLLDEAEAL 499
Query: 188 YEQLISQGCIPGQVTYASIINA 209
+++ G P VT+ ++ A
Sbjct: 500 LLEMVDDGFPPNAVTFDPLVRA 521
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 171/362 (47%), Gaps = 29/362 (8%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAF---YKIGDSEKVAALFLECESRKLDLTPS 58
N + L ++ +M+ G + + Y I++A+ KIG++ K+ L L P+
Sbjct: 218 NLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLM-----ALKGLNPN 272
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
Y ++ + L + G+ E + +M ++ + D + +LI + ++ A L
Sbjct: 273 LIS-YNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLH 331
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E + G+ ++ + L+ + G + + +E ++ M++ L+ + +++GFS++
Sbjct: 332 AEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQ 391
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A ++ ++++ G P +TY ++IN +C +G A + EM ++GF VV+Y
Sbjct: 392 GFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSY 451
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE-------- 290
S++++ + + + A +L +M KG P+V Y+SL + G K R E
Sbjct: 452 STIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSL--IQGLCKQRRLGEVCDLFQEM 509
Query: 291 ----------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
YT++I+AY + + D ++ ++E G D +++ F+K S+
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569
Query: 341 EE 342
+E
Sbjct: 570 KE 571
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 138/303 (45%), Gaps = 38/303 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M V D + ++ + +G+ + AL L E K L+P+ Y L +S+
Sbjct: 297 EEMSKRRYVPDRVTFNTLINGYCNVGNFHQ--ALVLHAEMVKNGLSPNVV-TYTTLINSM 353
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+G ++F M+++G+ + Y +LI F+ +K A ++ KE E G +
Sbjct: 354 CKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTI 413
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESM--------------------KNAEL--------- 161
+ L+ + G +E +++ M +N EL
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473
Query: 162 ----NISDCISCV--IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
IS ++ ++ G K+R ++++++S G P +VTY S+INAYC G
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
KA ++ EM QKGF +V Y+ ++ + K R ++A RL+ K+ + PN YN+
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNT 593
Query: 276 LMD 278
L+D
Sbjct: 594 LID 596
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 118/248 (47%), Gaps = 10/248 (4%)
Query: 63 YKILCDSLGKSGRAFEILK-FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D++ ++ ++ +I + F++M E G+ + Y LI F + +++ F E
Sbjct: 170 YNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEM 229
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G L ++ + ++ Y + + + +++ M LN + V++NG +
Sbjct: 230 ERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQM 289
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
++ E++ + +P +VT+ ++IN YC +G + +A + EM + G VV Y+++
Sbjct: 290 KETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTL 349
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEK------Y 292
+ K G + AM + +M+ +G PN Y +L+D G K Q+ K +
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409
Query: 293 TTVISAYN 300
T I YN
Sbjct: 410 TPTIITYN 417
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 145/309 (46%), Gaps = 18/309 (5%)
Query: 14 KSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
KS G + Y I++A + S K+A + E + ++P+ + Y IL +
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFK-EMVESGVSPN-VYTYNILIRGFCTA 216
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G L FF +M+ G L + Y ++I ++ + ++ A +L + KG+ +L +
Sbjct: 217 GNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISY 276
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ EG +++T E++E M ++NG+ + A+ ++ +++
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVK 336
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
G P VTY ++IN+ C+ G ++A + +M+ +G Y++++ + + G ++
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK-------------YTTVIS 297
A +++ +M G P + YN+L++ H GR ++ L + Y+T+IS
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456
Query: 298 AYNMAREFD 306
+ +E +
Sbjct: 457 GFCRNQELE 465
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 21/240 (8%)
Query: 75 RAFEILKFFR---DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
R E+ K F+ +M KGI D + Y+SLI + +LF+E G+ D
Sbjct: 460 RNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEV 519
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ Y EG ++K L + + M + V++NGF+K+ A ++ +L
Sbjct: 520 TYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579
Query: 192 ISQGCIPGQVTYASIIN---------------AYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ + +P ++TY ++I+ +C GL ++A++V M QKG+
Sbjct: 580 LYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEE 639
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRAKNLRQLEKYT 293
Y+ ++ + K G I A L +M G P+ +L + G+ L QL YT
Sbjct: 640 VYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYT 699
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 127/271 (46%), Gaps = 3/271 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G+ ++G Y ++ + G E+V E + DL P Y +L D
Sbjct: 388 FQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAH--DLEPD-VFTYGLLLDY 444
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G+ E F M KGI ++Y ++ + + +L G+ +
Sbjct: 445 LCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPN 504
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+F ++ Y + M+++ + + MK L+ + +++ K AV +
Sbjct: 505 HRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFN 564
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+I++G P V + S++ C + + K E++F+EM +G +V +++++ K G
Sbjct: 565 QMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEG 624
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
R+ +A RL+ M G +P+V YN+L+D H
Sbjct: 625 RVMEARRLIDSMVCMGLKPDVISYNTLIDGH 655
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 147/379 (38%), Gaps = 63/379 (16%)
Query: 21 DSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
DS C Y ++ F+ G +K +LFLE + ++P Y + D L K+
Sbjct: 186 DSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLE-----MGVSPDVV-TYNTIIDGLCKAQ 239
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
F+ M EKG+ + Y ++I EV +AE +F++ +KG+ +
Sbjct: 240 EVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYN 299
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
++ + V++ V + M + + I++G K +A A V++Q+I +
Sbjct: 300 TIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK 359
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG------------------------ 230
G P +TY II+ C+ +AE VF +M KG
Sbjct: 360 GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEV 419
Query: 231 -----------FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ V Y ++ K G+ +A L M KG +P+V IY ++
Sbjct: 420 VQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHG 479
Query: 280 HGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
+G+ L ++ + TVI AY D + + + + G +
Sbjct: 480 YGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPN 539
Query: 324 RAMAGIMVGVFSKLSQIEE 342
G ++ KL ++++
Sbjct: 540 VVTYGTLIDALCKLGRVDD 558
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G+ D Y I++ K +K +F + + + P + Y I+ D
Sbjct: 318 FQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGV--KPDNL-TYTIIIDG 374
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ F+ M +KG+ + Y LI + S + + + KE + D
Sbjct: 375 LCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPD 434
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G + + +SM + S I ++++G+ K+ A +
Sbjct: 435 VFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLN 494
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ G P + ++I AY + + + +FI+M+Q+G VV Y +++ K G
Sbjct: 495 LMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLG 554
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R+ DA+ +M +G PN ++NSL+
Sbjct: 555 RVDDAVLQFNQMINEGVTPNNVVFNSLV 582
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 41/280 (14%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M + GI + + ++ A+ K ++V +F++ + + L +P+ Y L D+L K
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGL--SPNVV-TYGTLIDALCK 552
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR + + F M +G+ + V+ SL+ ++ + + EELF E +G+ D+
Sbjct: 553 LGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVF 612
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F ++ +EG V + +++SM +
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSM-----------------------------------V 637
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P ++Y ++I+ +C +A K+ M G +V+Y++++ Y K GRI
Sbjct: 638 CMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRID 697
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
+A L +M KG P V YN++++ GR R+L
Sbjct: 698 NAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 110/264 (41%), Gaps = 3/264 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M + G+ ++ + ++ + EKV LFLE ++ + P +LC+
Sbjct: 563 FNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGI--RPDIVFFNTVLCN- 619
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K GR E + M G+ D Y +LI + + A +L G+ +
Sbjct: 620 LCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPN 679
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y + G ++ + M + I+NG + + A ++Y
Sbjct: 680 IVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYV 739
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I + TY+ I++ +C+ + +A K+F + ++ ++ M+ K G
Sbjct: 740 NMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGG 799
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIY 273
R DAM L A + G P+V Y
Sbjct: 800 RKEDAMDLFAAIPANGLVPSVVTY 823
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D + R E +K M G+ + Y +L+ + + A LF+E
Sbjct: 648 YNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREML 707
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ +E + ++ G + E+ +M + S C +I++GF K +
Sbjct: 708 RKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFD 767
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K+++ L S +T+ +I+ + G A +F + G VV Y +
Sbjct: 768 EAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIA 827
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G + + L + M+ G PN + N+L+
Sbjct: 828 ENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALI 862
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 159/348 (45%), Gaps = 20/348 (5%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ GI ++ Y ++ K +EK ++ + K + ++T + ++ + G
Sbjct: 37 EMREHGIPPNATVYNAYLDGLLKARCTEKAVEVY---QRMKRERCRANTETFTLMINVYG 93
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+ + +K F +MK G + Y +L+ +FA + AEE+F+E ++ G D+
Sbjct: 94 KAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 153
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ Y G+ + E+ M++ ++V+ + + + A V+E+L
Sbjct: 154 AYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEEL 213
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+G P ++ ++ A+ R G ++ E+V ++ + G A ++M+ Y + GR+
Sbjct: 214 KQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRL 273
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE----------------KYTTV 295
D RL A M+ +G + +V YN ++ +GRA + ++E +T
Sbjct: 274 DDMERLFAAMERRG-DADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTAR 332
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ AY +E+ CV E G D A +++ S Q+E++
Sbjct: 333 MGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAACSDERQVEQV 380
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 102/187 (54%)
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
YA L+ ++ + + AE + E E G+ + V+ + ++ EK +EV + M
Sbjct: 14 TYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRM 73
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
K + +++N + K + +++KV+ ++ S GC P TY +++NA+ R GL
Sbjct: 74 KRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLC 133
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
KAE+VF EMQQ G + V AY++++ Y + G + A + + M+ GCEP+ YN L
Sbjct: 134 EKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNIL 193
Query: 277 MDMHGRA 283
+D +GRA
Sbjct: 194 VDAYGRA 200
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 132/289 (45%), Gaps = 8/289 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ A+ G + + E R+ + P++T +Y D L K+ + ++ ++
Sbjct: 15 YALLLRAYCNAGSLHRAEGVI--SEMREHGIPPNAT-VYNAYLDGLLKARCTEKAVEVYQ 71
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
MK + + + +I + + + ++F E + G ++ + LV + EG
Sbjct: 72 RMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREG 131
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ EK EV E M+ A ++ +S+ A +++ + GC P + +Y
Sbjct: 132 LCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYN 191
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+++AY R GL+ AE VF E++Q+G + ++ ++A + ++G ++A++
Sbjct: 192 ILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKS 251
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYN 313
G P+ + N++++ + RA L +E+ M R D V YN
Sbjct: 252 GLTPDTFALNAMLNAYARAGRLDDMERLFAA-----MERRGDADVGTYN 295
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%)
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ + L+ Y G + + V+ M+ + + + ++G K R AV+VY++
Sbjct: 13 DTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQR 72
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + C T+ +IN Y + + KVF EM+ G + Y+++V + + G
Sbjct: 73 MKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGL 132
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
A + +M+ G EP+V+ YN+LM+ + RA
Sbjct: 133 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRA 165
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 78/203 (38%), Gaps = 51/203 (25%)
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS---------- 240
L+ C+P + TYA ++ AYC G +AE V EM++ G Y++
Sbjct: 3 LLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARC 62
Query: 241 -------------------------MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
M+ +YGK + +M++ +MK GC+PN+ Y +
Sbjct: 63 TEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTA 122
Query: 276 LMDMHGR----------------AKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
L++ R A + + Y ++ AY+ A + ++ + G
Sbjct: 123 LVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMG 182
Query: 320 GVIDRAMAGIMVGVFSKLSQIEE 342
DRA I+V + + E+
Sbjct: 183 CEPDRASYNILVDAYGRAGLHED 205
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/295 (18%), Positives = 110/295 (37%), Gaps = 58/295 (19%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF-----LECESRKLDLTPSSTHMYK 64
+E+M+ AG D Y +MEA+ + G + + +F + CE + Y
Sbjct: 140 FEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRAS--------YN 191
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
IL D+ G++G + F ++K++G+ + L+ + A EE+ + +
Sbjct: 192 ILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKS 251
Query: 125 GMLRDLEVFLKLVLMYIEEGMV---EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G+ D ++ Y G + E+ +E +A++
Sbjct: 252 GLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRGDADVG------------------- 292
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
TY +NAY R G + E F + +G VV +++
Sbjct: 293 --------------------TYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTAR 332
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
+ Y + + +V +M GC P+ L+ + RQ+E+ T ++
Sbjct: 333 MGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLL---AACSDERQVEQVTAIV 384
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 171/362 (47%), Gaps = 29/362 (8%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAF---YKIGDSEKVAALFLECESRKLDLTPS 58
N + L ++ +M+ G + + Y I++A+ KIG++ K+ L L P+
Sbjct: 218 NLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLM-----ALKGLNPN 272
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
Y ++ + L + G+ E + +M ++ + D + +LI + ++ A L
Sbjct: 273 LIS-YNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLH 331
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E + G+ ++ + L+ + G + + +E ++ M++ L+ + +++GFS++
Sbjct: 332 AEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQ 391
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A ++ ++++ G P +TY ++IN +C +G A + EM ++GF VV+Y
Sbjct: 392 GFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSY 451
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE-------- 290
S++++ + + + A +L +M KG P+V Y+SL + G K R E
Sbjct: 452 STIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSL--IQGLCKQRRLGEVCDLFQEM 509
Query: 291 ----------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
YT++I+AY + + D ++ ++E G D +++ F+K S+
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569
Query: 341 EE 342
+E
Sbjct: 570 KE 571
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 138/303 (45%), Gaps = 38/303 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M V D + ++ + +G+ + AL L E K L+P+ Y L +S+
Sbjct: 297 EEMSKRRYVPDRVTFNTLINGYCNVGNFHQ--ALVLHAEMVKNGLSPNVV-TYTTLINSM 353
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+G ++F M+++G+ + Y +LI F+ +K A ++ KE E G +
Sbjct: 354 CKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTI 413
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESM--------------------KNAEL--------- 161
+ L+ + G +E +++ M +N EL
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473
Query: 162 ----NISDCISCV--IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
IS ++ ++ G K+R ++++++S G P +VTY S+INAYC G
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
KA ++ EM QKGF +V Y+ ++ + K R ++A RL+ K+ + PN YN+
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNT 593
Query: 276 LMD 278
L+D
Sbjct: 594 LID 596
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 118/248 (47%), Gaps = 10/248 (4%)
Query: 63 YKILCDSLGKSGRAFEILK-FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D++ ++ ++ +I + F++M E G+ + Y LI F + +++ F E
Sbjct: 170 YNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEM 229
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G L ++ + ++ Y + + + +++ M LN + V++NG +
Sbjct: 230 ERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQM 289
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
++ E++ + +P +VT+ ++IN YC +G + +A + EM + G VV Y+++
Sbjct: 290 KETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTL 349
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEK------Y 292
+ K G + AM + +M+ +G PN Y +L+D G K Q+ K +
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409
Query: 293 TTVISAYN 300
T I YN
Sbjct: 410 TPTIITYN 417
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 145/309 (46%), Gaps = 18/309 (5%)
Query: 14 KSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
KS G + Y I++A + S K+A + E + ++P+ + Y IL +
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFK-EMVESGVSPN-VYTYNILIRGFCTA 216
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G L FF +M+ G L + Y ++I ++ + ++ A +L + KG+ +L +
Sbjct: 217 GNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISY 276
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ EG +++T E++E M ++NG+ + A+ ++ +++
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVK 336
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
G P VTY ++IN+ C+ G ++A + +M+ +G Y++++ + + G ++
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK-------------YTTVIS 297
A +++ +M G P + YN+L++ H GR ++ L + Y+T+IS
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456
Query: 298 AYNMAREFD 306
+ +E +
Sbjct: 457 GFCRNQELE 465
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 21/240 (8%)
Query: 75 RAFEILKFFR---DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
R E+ K F+ +M KGI D + Y+SLI + +LF+E G+ D
Sbjct: 460 RNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEV 519
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ Y EG ++K L + + M + V++NGF+K+ A ++ +L
Sbjct: 520 TYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579
Query: 192 ISQGCIPGQVTYASIIN---------------AYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ + +P ++TY ++I+ +C GL ++A++V M QKG+
Sbjct: 580 LYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEE 639
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRAKNLRQLEKYT 293
Y+ ++ + K G I A L +M G P+ +L + G+ L QL YT
Sbjct: 640 VYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYT 699
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 137/290 (47%), Gaps = 5/290 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L +Y++M+ + D + ++ F + G+ + AA +L E R+ L P +Y
Sbjct: 281 EEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDH-AAEYLR-EMREFGLMPDGV-IY 337
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ ++G E L+ +M G L D Y +L+ + AEEL E +E
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ DL F L+ Y +G +EK L+ +++ + L +++G ++
Sbjct: 398 RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGK 457
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++++ + S+ P VTY+ +I+++C G A EM KG ++ Y+S++
Sbjct: 458 ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIK 517
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYT 293
Y ++G + + + KM+ P++ YN+L +HG K + E +
Sbjct: 518 GYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTL--IHGYVKEGKMHEAFN 565
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 124/259 (47%), Gaps = 3/259 (1%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+++A ++ GD E AL S+ + Y + L ++GR + + FR M
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIK---PGLVTYNSVLKGLLRNGRWDKAREVFRAMD 256
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
G+ D + LI F E++ A +KE + + D+ F L+ ++ G ++
Sbjct: 257 ACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMD 316
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
E + M+ L I +++ GF + A++V +++++ GC+P VTY +++
Sbjct: 317 HAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLL 376
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N C+ S AE++ EM+++G + +++++ Y + G I A++ + +
Sbjct: 377 NGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLR 436
Query: 268 PNVWIYNSLMDMHGRAKNL 286
P++ YN+L+D R +L
Sbjct: 437 PDIVTYNTLIDGMCRQGDL 455
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 3/230 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + L +++ + + D Y +++ + GD K L+ + SR ++ P+
Sbjct: 419 NIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSR--EIFPNHV- 475
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL DS + G+ F +M KGI+ + Y S+I + V ++ +
Sbjct: 476 TYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKM 535
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++ DL + L+ Y++EG + + +++ M+N + +I++GFS
Sbjct: 536 RHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNM 595
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A VY+++ ++G P + TY S+IN + G K+ ++ EM QKG
Sbjct: 596 QEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGL 645
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 107/236 (45%), Gaps = 2/236 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ ++ D+ ++G + M KGI Y S++ A E+F+ +
Sbjct: 197 HNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMD 256
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
G+ D+ F L+ + G +E+ L + M+ + D +S ++ F++R
Sbjct: 257 ACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVT-PDVVSFSCLIGLFTRRGEM 315
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + ++ G +P V Y +I +CR GL +A +V EM G VV Y+++
Sbjct: 316 DHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTL 375
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+ K R+ DA L+ +MK +G P++ + +L+ + R N+ + ++ IS
Sbjct: 376 LNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTIS 431
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 113/260 (43%), Gaps = 5/260 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+MK G+ D + ++ + + G+ EK F ++L Y L D +
Sbjct: 393 NEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLR---PDIVTYNTLIDGM 449
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G + + + DM + I + Y+ LI S +V A E KG++ ++
Sbjct: 450 CRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNI 509
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
+ ++ Y G V K + + M++ ++ + D I+ +++G+ K A + +
Sbjct: 510 MTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV-MPDLITYNTLIHGYVKEGKMHEAFNLLK 568
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ ++ P VTY II+ + G +A+ V+ +M +G + Y SM+ + G
Sbjct: 569 IMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAG 628
Query: 250 RIRDAMRLVAKMKPKGCEPN 269
+ + +L +M KG P+
Sbjct: 629 NSKKSFQLHDEMLQKGLAPD 648
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 24/185 (12%)
Query: 179 RAYWA--AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
RA W Y ++S T ++++YC+ + + + V EM+++ VV
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL-------------------M 277
++ MV + G + AM L+ M KG +P + YNS+ M
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255
Query: 278 DMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
D G A ++R + +I + A E + ++FY E R D ++G+F++
Sbjct: 256 DACGVAPDVRS---FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRR 312
Query: 338 SQIEE 342
+++
Sbjct: 313 GEMDH 317
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 132/271 (48%), Gaps = 13/271 (4%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-----CESRKLDLTPSSTHMYKILC 67
M + G D Y I+ KIG++ A LF + C+ D+ ST +
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQP---DVVTYST-----II 52
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
DSL K R E L F MK KGI + Y SLI + + + A + E ++
Sbjct: 53 DSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIM 112
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ F L+ ++ +EG V + V+++M + + ++NG+S + + A K+
Sbjct: 113 PNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKL 172
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ +I++GC P +Y +IN YC+ +A+++F EM +G +V+Y++++ +
Sbjct: 173 FDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQ 232
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR+R+A L M G P++ Y+ L+D
Sbjct: 233 LGRLREAHDLFKNMLTNGNLPDLCTYSILLD 263
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 123/264 (46%), Gaps = 3/264 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + MK+ GI + Y +++ + +A+ E S L++ P+ + +L
Sbjct: 65 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS--LNIMPNIV-TFSLL 121
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ K G FE + M E G+ + Y+SL+ ++ AEV A +LF KG
Sbjct: 122 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGC 181
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ Y + + + ++ M + L +++G + A
Sbjct: 182 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD 241
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ +++ G +P TY+ +++ +C+ G +KA ++F MQ +V Y+ ++
Sbjct: 242 LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMC 301
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNV 270
K+ +++A +L +++ +G +PN+
Sbjct: 302 KSRNLKEARKLFSELFVQGLQPNM 325
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 61/117 (52%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
I+NG K AA +++++ GC P VTY++II++ C+ ++A +F M+ K
Sbjct: 15 TIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK 74
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
G + Y+S++ R R+A ++ +M PN+ ++ L+++ + N+
Sbjct: 75 GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNV 131
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 47/344 (13%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M++ GI G Y ++++ D KV ALF E ++ + ++Y + ++
Sbjct: 190 EIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNV---VGDVYLYTAVINAY 246
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G K + G+ + Y LI F I +++ AE L + + +G+ +
Sbjct: 247 CRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQ 306
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMK--NAELNIS--DCISCVIVNGFSKRRAYWAAVK 186
+F ++ Y +GMV+ L++ +M+ ELNI + ++C
Sbjct: 307 IIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLAC----------------- 349
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
L G +P VTY ++I+ +C+ G +A ++F EM +KG V+ YS M+ Y
Sbjct: 350 ---GLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYA 406
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------LRQLEK--------- 291
K GRIR+A R +M+ KG P+V+ Y SL +HG N L+ E+
Sbjct: 407 KKGRIREAERFRKEMEKKGFVPDVYTYASL--VHGHCVNGKVDVALKLFEEMKQRGTEPN 464
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
YT +IS + + Y++ G + D ++ +VG
Sbjct: 465 VVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVG 508
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 125/281 (44%), Gaps = 38/281 (13%)
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
GR EIL+ M+ +GI Y L+ S ++ ++ E LF E + ++ D+ ++
Sbjct: 183 GRVQEILEI---MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLY 239
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ Y G + + +V++ + ++ V++ GF K AA + +
Sbjct: 240 TAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQG 299
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV------------------ 235
QG Q+ + ++I+ YCR G+ A K+ M++ G + +
Sbjct: 300 QGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPN 359
Query: 236 -VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--- 291
V Y+++++++ K G + +A RL +M KG P+V Y+ ++ + + +R+ E+
Sbjct: 360 YVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRK 419
Query: 292 -------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y +++ + + + D+ +K + E + G
Sbjct: 420 EMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRG 460
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 46 LECESRKLDLTP---SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI 102
L C ++ + P + T + I C K G E + FR+M EKG Y+ +I
Sbjct: 347 LACGLCRMGVVPNYVTYTTLISIHC----KDGDMVEARRLFREMAEKGATPSVLTYSVMI 402
Query: 103 CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN 162
+A ++ AE KE E+KG + D+ + LV + G V+ L++ E MK
Sbjct: 403 HGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTE 462
Query: 163 ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
+ +++G +K AA ++Y+ ++ G IP Y++++ +
Sbjct: 463 PNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGS 509
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 126/338 (37%), Gaps = 75/338 (22%)
Query: 42 AALFLECESRKLDLTPSSTHMY--KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA 99
AA LE R L P S + ++ D L KSGR + + DM G+ + Y
Sbjct: 114 AAGLLE---RALGSCPGSVSPFAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYN 170
Query: 100 SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA 159
SL+ D V K ++G V++ LE+ M+N
Sbjct: 171 SLL--------------------------DCYVRQK------DDGRVQEILEI---MENE 195
Query: 160 ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
+ + ++V+ S R ++ ++ + + Y ++INAYCR G +A
Sbjct: 196 GIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRA 255
Query: 220 EKVFIE-----------------------------------MQQKGFDKCVVAYSSMVAM 244
KV E MQ +G + +++M+
Sbjct: 256 AKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDG 315
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
Y + G + DA+++ A M+ G E N++ YN+L R + YTT+IS + +
Sbjct: 316 YCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGD 375
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ + E G +M+ ++K +I E
Sbjct: 376 MVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIRE 413
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 138/303 (45%), Gaps = 6/303 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M AG+ D Y M+ K G + +F E R ++ +T ++ L D+ K
Sbjct: 305 MAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVN---PNTVVFTTLIDAHCK 361
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G L+ R+M +GI D Y +L + ++K A ++ +E G+ D
Sbjct: 362 EGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVT 421
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + +EG ++ +E+ + M + + + + +++G SK + ++ +++
Sbjct: 422 YTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMM 481
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P TY +I+A+C+ K+ EMQ KG VV Y+ ++ + G+++
Sbjct: 482 EAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMK 541
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFY 312
+A L+ M G P+ YN L+D H + +R E+ + SA M +F +
Sbjct: 542 NADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEE---LKSAKGMVSDFGLYTSLI 598
Query: 313 NEF 315
NEF
Sbjct: 599 NEF 601
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/234 (17%), Positives = 102/234 (43%), Gaps = 2/234 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + +L + +SG+ F +M +G+ + +L+ +++ A
Sbjct: 241 PPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANA 300
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L + G+ D+ + + + G ++ +E+ E M+ +N + + +++
Sbjct: 301 LRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHC 360
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A ++++ ++ ++G V Y ++ N CR+ A + EM+ G V
Sbjct: 361 KEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKV 420
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
Y++++ + K G + AM + +M +G + Y +L+ G +K+ R ++
Sbjct: 421 TYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLIS--GLSKSGRSVD 472
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 16/183 (8%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++G K +A + + G P TY + + C+ G A ++F EM+++
Sbjct: 284 TLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRER 343
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G + V +++++ + K G + + L +M +G + ++ YN+L + R ++L+
Sbjct: 344 GVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAA 403
Query: 290 EK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
YTT+I + E DM ++ E G +D ++
Sbjct: 404 NDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISG 463
Query: 334 FSK 336
SK
Sbjct: 464 LSK 466
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 160/367 (43%), Gaps = 39/367 (10%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDL-TPSSTHMYKILC 67
++++M+S G + Y ++ A+ K + + +F +R +D P +T Y L
Sbjct: 345 WFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIF----NRMIDAGCPPNTITYSALV 400
Query: 68 DSLGKSG---RAFEILK-------------FFRDMKEKGILEDPSVYASLICSFASIAEV 111
D L K+G +A E+ +F I + Y +LI +V
Sbjct: 401 DGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKV 460
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A+EL G + ++ L+ + + G ++ EV M + +
Sbjct: 461 VDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSL 520
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ K R A+KV Q++ C P VTY ++I+ CRIG KA K+ M++KG
Sbjct: 521 IDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGC 580
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD----------MHG 281
VV Y++++ GK+G++ +++L +M KGC PN Y L++ H
Sbjct: 581 SPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHS 640
Query: 282 RAKNLRQ------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
++Q L+ Y +V+ + +++F + E +G V + G+++ FS
Sbjct: 641 LLSEMKQTYWPKYLQGYCSVVQGF--SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFS 698
Query: 336 KLSQIEE 342
K ++EE
Sbjct: 699 KAGRLEE 705
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 131/289 (45%), Gaps = 36/289 (12%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++ + + LC +GK AF+I+K M KG + D S Y+ +I +V+ A L
Sbjct: 255 NTANFARCLC-GMGKFDMAFQIIKV---MMGKGFVPDTSTYSKVITFLCEAMKVEKAFLL 310
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F+E + G+ D+ + L+ + + G++E+ + M++ + + +++ + K
Sbjct: 311 FQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLK 370
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM----------- 226
+ A ++ ++I GC P +TY+++++ C+ G KA +V+ ++
Sbjct: 371 AKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDF 430
Query: 227 -----QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH- 280
VV Y +++ K ++ DA L+ M GCEPN IY++L+D
Sbjct: 431 YFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFC 490
Query: 281 --GRAKN-------------LRQLEKYTTVISAYNMAREFDMCVKFYNE 314
G+ N L + YT++I A R D+ +K ++
Sbjct: 491 KVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQ 539
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 139/341 (40%), Gaps = 57/341 (16%)
Query: 35 IGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
IG S+ V + F E + D + Y L D L K+ + + + M G +
Sbjct: 420 IGTSDNVGSDFYF-EGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPN 478
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGML----------------RDLEVFLKLVL 138
+Y +LI F + ++ A+E+F + G L R L++ +K++
Sbjct: 479 HIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLS 538
Query: 139 MYIEE-------------------GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
+E G +K L+++ M+ + + +++G K
Sbjct: 539 QMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSG 598
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+++++ Q+ ++GC P VTY +IN C GL +A + EM+Q + K + Y
Sbjct: 599 KVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYC 658
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK--------------- 284
S+V + K + ++ L+ +++ G P +Y L+D +A
Sbjct: 659 SVVQGFSK--KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMEL 716
Query: 285 ----NLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
N+ + YT++I A +A + + + Y+E G V
Sbjct: 717 SSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVV 757
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 93/244 (38%), Gaps = 45/244 (18%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M ++G +PS++ SL+ S+ + + A +L K + G G
Sbjct: 168 MMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCG---------------CPPGY 212
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
V + + EL D ++ A KVYE++++ C+ +V A+
Sbjct: 213 VAYNIFIGSICGGEELPSPDLLA--------------LAEKVYEEMLASSCVLNKVNTAN 258
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
C +G + A ++ M KGF YS ++ + ++ A L +MK G
Sbjct: 259 FARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVG 318
Query: 266 CEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCV 309
P+V+ Y L+D +A + Q YT ++ AY A++
Sbjct: 319 VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQAS 378
Query: 310 KFYN 313
+N
Sbjct: 379 DIFN 382
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 118/307 (38%), Gaps = 46/307 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G + Y +++A +K D A+ + + + TP+ Y + D
Sbjct: 502 FLRMSKCGYLPTVHTYTSLIDAMFK--DRRLDLAMKVLSQMVESSCTPNVV-TYTAMIDG 558
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + G + LK M+EKG + Y +LI +V ++ +LF + KG +
Sbjct: 559 LCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPN 618
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ G++++ ++ MK C +V GFSK+ + A++ + E
Sbjct: 619 YVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKK--FIASLGLLE 676
Query: 190 QLISQGCIP--------------------------------------GQVTYASIINAYC 211
+L S G +P + Y S+I A C
Sbjct: 677 ELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALC 736
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
KA +++ E+ +KG + + ++ K + +A++L + +G W
Sbjct: 737 LASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGVN---W 793
Query: 272 IYNSLMD 278
N+ D
Sbjct: 794 QSNNSFD 800
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 80/190 (42%), Gaps = 3/190 (1%)
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
++K+ G + Y +L+ A+ ++ + + KE E G D +EG
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
L ++E ++ +L+ C +++G + + A+ ++ CIP VTY
Sbjct: 90 RWSDALVMIER-EDFKLDTVLCTQ--MISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+++ + + +++ M ++G + ++S+V Y A +L+ +M
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206
Query: 265 GCEPNVWIYN 274
GC P YN
Sbjct: 207 GCPPGYVAYN 216
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 157/338 (46%), Gaps = 19/338 (5%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
DS +C +++ + G + +L+ + D P+ +Y L + K GR +
Sbjct: 481 DSRTFCSLIDGLGRRGRVDDAYSLYEKMLDS--DQIPNVV-VYTSLIQNFFKCGRKEDGH 537
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
K +++M +G D + S + EV+ LF+E + +G++ D+ + L+
Sbjct: 538 KIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGL 597
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
++ G +T ++ MK L++ +++GF K A ++ E++ ++G P
Sbjct: 598 VKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTV 657
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY S+++ +I +A +F E + G D VV YSS++ +GK GRI +A ++ +
Sbjct: 658 VTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEE 717
Query: 261 MKPKGCEPNVWIYNSLMDMHGRA----------KNLRQLE------KYTTVISAYNMARE 304
+ KG PN + +N L+D +A +N++ L+ Y+ +I+ M R+
Sbjct: 718 LMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRK 777
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
F+ F+ E + G + M+ +K + E
Sbjct: 778 FNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVME 815
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 134/302 (44%), Gaps = 21/302 (6%)
Query: 59 STHMYKILCDSLGKSGR---AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
S H+ L S KS + AF +++ R K + S Y +LI + ++
Sbjct: 167 SNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAF---SAYTTLIGALSAANRPDPML 223
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
LF + +E G ++ +F LV ++ EG ++ L +++ MK+ + V ++ F
Sbjct: 224 TLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCF 283
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A K + ++ +QG +P VTY ++I C+ +A ++F E+ CV
Sbjct: 284 GKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCV 343
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------KN 285
AY++M+ YG G+ +A L+ + K KGC P+V YN ++ GR
Sbjct: 344 YAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDE 403
Query: 286 LRQ-----LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
+RQ L Y +I A E + +K + + G + IM+ K ++
Sbjct: 404 MRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKL 463
Query: 341 EE 342
+E
Sbjct: 464 DE 465
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E++K+ G+V D Y ++ K G S + LF E + + L L Y + D
Sbjct: 575 FEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHL---DVLAYNTVIDG 631
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KSG+ + + +MK KG+ Y S++ A I + A LF+EA+ G+ +
Sbjct: 632 FCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLN 691
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ L+ + + G +++ ++E + L + +++ K A ++
Sbjct: 692 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQ 751
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + C P +TY+ +IN C I ++KA + EMQ++G + Y++M+A K G
Sbjct: 752 NMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAG 811
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +A L + K G P+ YN++++
Sbjct: 812 NVMEARGLFDRFKASGGVPDSACYNAMIE 840
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 124/280 (44%), Gaps = 4/280 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+YE MK G+ LD Y +++ F K G +K L E +++ L T + Y + D
Sbjct: 610 FYE-MKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVT---YGSVVD 665
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K R E F + K G+ + +Y+SLI F + + A + +E +KG+
Sbjct: 666 GLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 725
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ ++ +++ ++MKN + + + +++NG R + A +
Sbjct: 726 NSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFW 785
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ QG P +TY ++I + G +A +F + G Y++M+
Sbjct: 786 QEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSA 845
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ DA + + + KGC N L+D +A L Q
Sbjct: 846 NKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQ 885
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 108/236 (45%), Gaps = 11/236 (4%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++ H++ L + GR L +MK D +Y I F + +V +A +
Sbjct: 236 ANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKF 295
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IV 172
F E + +G++ D + L+ + + +++ +E+ E EL+++ + CV ++
Sbjct: 296 FHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFE-----ELDLNRSVPCVYAYNTMI 350
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
G+ + A + E+ +GCIP + Y I+ R G +A ++ EM+Q
Sbjct: 351 MGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAP 410
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ Y+ ++ M K G + A+++ MK G PN+ N ++D +A+ L +
Sbjct: 411 N-LTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDE 465
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 118/270 (43%), Gaps = 4/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ +MK+ G+V D Y ++ K ++ LF E + L+ + + Y +
Sbjct: 295 FFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELD---LNRSVPCVYAYNTMIM 351
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G +G+ E K KG + Y ++ +V+ A + E +
Sbjct: 352 GYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA-P 410
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+L + L+ M + G +E L+V ++MK A L + ++++ K + A ++
Sbjct: 411 NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIF 470
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
L + C P T+ S+I+ R G A ++ +M VV Y+S++ + K
Sbjct: 471 LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKC 530
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR D ++ +M +GC P++ + NS MD
Sbjct: 531 GRKEDGHKIYKEMVHRGCSPDLMLLNSYMD 560
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 120/281 (42%), Gaps = 14/281 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +M+ G + + ++ F + G + +L E +S + +Y +
Sbjct: 223 LTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSF---TADLVLYNVC 279
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D GK G+ KFF +MK +G++ D Y +LI + A ELF+E +
Sbjct: 280 IDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRS 339
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI-----VNGFSKRRAY 181
+ + + +++ Y G ++ ++E K CI VI + ++
Sbjct: 340 VPCVYAYNTMIMGYGSAGKFDEAYSLLERQKR-----KGCIPSVIAYNCILTCLGRKGKV 394
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++++++ Q P TY +I+ C+ G A KV M++ G ++ + M
Sbjct: 395 EEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIM 453
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+ K ++ +A + + K C P+ + SL+D GR
Sbjct: 454 IDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGR 494
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 95/226 (42%), Gaps = 4/226 (1%)
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
P VY + + A + E++ +E G V ++LV +++ +++ V+E
Sbjct: 133 PEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIE 192
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M+ + + ++ S + ++ Q+ G + +++ + R G
Sbjct: 193 MMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREG 252
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
A + EM+ F +V Y+ + +GK G++ A + +MK +G P+ Y
Sbjct: 253 RIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYT 312
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGG 320
+L+ + +A R+L++ + ++ R CV YN M G
Sbjct: 313 TLIGVLCKA---RRLDEAVELFEELDLNRSVP-CVYAYNTMIMGYG 354
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 135/282 (47%), Gaps = 3/282 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E MK+AGI+ D Y ++ + E+ AA+F + +S + P Y L D
Sbjct: 92 FEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKS--MGFVPDKV-TYNTLLDV 148
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GKS R E ++ R+M+ G Y SLI ++A ++ A EL + E+G+ D
Sbjct: 149 YGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLD 208
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ ++ G E + V E M+ A + C ++ R + +KV+E
Sbjct: 209 VFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ C+P VT+ +++ + + G+ S+ VF EM++ GF Y+++++ Y + G
Sbjct: 269 EIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCG 328
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
AM + +M G P++ YN+++ R Q EK
Sbjct: 329 SFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEK 370
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 155/355 (43%), Gaps = 19/355 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S + +E+M++AG + C G+ K A + E K+ +
Sbjct: 226 ESAMRVFEEMRTAGCKPN---ICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTW 282
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L G++G E+ F++MK G + + Y +LI +++ A ++K +
Sbjct: 283 NTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLD 342
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ DL + ++ G+ E++ +++ M++ ++ C +++ ++ +
Sbjct: 343 TGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGR 402
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+ + E++ S P V +++ + L +AE+ F+E+++KGF + ++M+A
Sbjct: 403 MLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIA 462
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
+YG+ + ++ MK G P++ YNSLM MH +++N + E+
Sbjct: 463 IYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKP 522
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y TVI AY ++E R +G + D V ++ S EE
Sbjct: 523 DIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEE 577
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 36/263 (13%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
++ + LGK G+ ++ + G D Y SLI + S + A +FK+ EE+
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 125 GMLRDLEVFLKLVLMYIEEGMV-EKTLEVVESMKNA-----ELNISDCISC--------- 169
G L + ++ +Y + GM K + E MKNA E + I+C
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEE 122
Query: 170 ---------------------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+++ + K R A++V ++ GC P VTY S+I+
Sbjct: 123 AAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLIS 182
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
AY R GL +A ++ +M ++G V Y++M++ + +TG+ AMR+ +M+ GC+P
Sbjct: 183 AYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKP 242
Query: 269 NVWIYNSLMDMHGRAKNLRQLEK 291
N+ +N+L+ MHG ++ K
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMK 265
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 19/277 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLE--CESRKLDLTPSSTHMYK 64
Y++M GI D Y ++ A + G SEK+ A + C+ +L TH
Sbjct: 337 YKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNEL------TH--- 387
Query: 65 ILCDSLGKSGRAFEILKFFRDMKE--KGILEDPSVYASLICSFASIAEVKV-AEELFKEA 121
C L EI + +E G++E +V + S ++ + AE F E
Sbjct: 388 --CSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLEL 445
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ KG DL ++ +Y MV KT E++ MK + S ++ S+ +
Sbjct: 446 KRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENF 505
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ +V ++++++G P ++Y ++I AYCR G +A +F EM++ G V+ Y++
Sbjct: 506 ERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTF 565
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
VA Y +A+ +V M GC+PN YNS++D
Sbjct: 566 VASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVID 602
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 92/185 (49%), Gaps = 1/185 (0%)
Query: 99 ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
A +I +V VA L + G D+ + L+ + G + + V + M+
Sbjct: 2 AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 159 AELNISDCISCVIVNGFSKRRAYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ VI+N + K W + ++E + + G +P + TY ++I R LY
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A VF +M+ GF V Y++++ +YGK+ RI++A+ ++ +M+ GC P++ YNSL+
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181
Query: 278 DMHGR 282
+ R
Sbjct: 182 SAYAR 186
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
EIL F MKE G + Y SL+ + + +EE+ KE KG+ D+ + ++
Sbjct: 475 EILNF---MKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVI 531
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGC 196
Y G +++ + M+ + L I D I+ V ++ + A+ V +I GC
Sbjct: 532 FAYCRNGRMKEASHIFSEMRESGL-IPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGC 590
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
P Q TY S+I+ YC++ A K + +
Sbjct: 591 KPNQNTYNSVIDGYCKLNRRDDAIKFISSLHE 622
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 86/196 (43%), Gaps = 8/196 (4%)
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
CD L ++ RAF ++K KG D S ++I + V E+ +E G
Sbjct: 432 CDLLLEAERAF------LELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGF 485
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAV 185
L + L+ M+ + E++ EV++ + + D IS ++ + + A
Sbjct: 486 TPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIK-PDIISYNTVIFAYCRNGRMKEAS 544
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++ ++ G IP +TY + + +Y ++ +A V M + G Y+S++ Y
Sbjct: 545 HIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGY 604
Query: 246 GKTGRIRDAMRLVAKM 261
K R DA++ ++ +
Sbjct: 605 CKLNRRDDAIKFISSL 620
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 143/302 (47%), Gaps = 13/302 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y+E +++ I + Y +++A+ G EK A+F E RK L PS+ +Y D
Sbjct: 171 YFELIEARCIPTED-TYALLLKAYCTSGLLEKAEAIF--AEMRKYGLPPSAI-VYNAYID 226
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K+G ++ F+ MK Y LI ++ +A +LF E +
Sbjct: 227 GLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKP 286
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + LV + EG+ EK E+ E ++ ++ +S+ + A +++
Sbjct: 287 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIF 346
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ GC P + +Y +++AY R GL+ A+ VF EM++ G + ++ +++ Y K
Sbjct: 347 SLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKA 406
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------YTTVISAY 299
G + +V ++ G EP+ ++ NS+++++GR ++E+ Y T IS Y
Sbjct: 407 GDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTY 466
Query: 300 NM 301
N+
Sbjct: 467 NI 468
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 160/350 (45%), Gaps = 19/350 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ G+ + Y ++ K G+ ++ +F + K D ST Y +L +
Sbjct: 206 FAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIF---QRMKRDCCQPSTETYTLLINL 262
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK+ +++ LK F +M+ + + Y +L+ +FA + AEE+F++ +E G D
Sbjct: 263 HGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPD 322
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y G E+ M++ ++V+ + + + A V+E
Sbjct: 323 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFE 382
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ G P ++ +++AY + G +K E + E+ + G + +SM+ +YG+ G
Sbjct: 383 EMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLG 442
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR---------------AKNLR-QLEKYT 293
+ ++ M+ ++ YN L++++GR AKNL+ + +T
Sbjct: 443 QFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLAAKNLKPDVVTWT 502
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ + AY+ + + C++ + E G D A +++ S QIE++
Sbjct: 503 SRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSSCSSEDQIEQV 552
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 143/299 (47%), Gaps = 16/299 (5%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S ++ ++ D+ G+ + ++ E + YA L+ ++ + ++ AE +
Sbjct: 146 SDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAYCTSGLLEKAEAI 205
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F E + G+ V+ + ++ G ++ +E+ + MK S +++N K
Sbjct: 206 FAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGK 265
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A+K++ ++ SQ C P TY +++NA+ R GL KAE++F ++Q+ G + V A
Sbjct: 266 ASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYA 325
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------KNLR 287
Y++++ Y + G A + + M+ GCEP+ YN ++D +GR + ++
Sbjct: 326 YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMK 385
Query: 288 QL------EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
+L + + ++SAY+ A + C NE +G D + M+ ++ +L Q
Sbjct: 386 RLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQF 444
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MKS I D Y ++ K+ K L +E E +D S + L D+
Sbjct: 214 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD---PSVETFNTLIDA 270
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G +G+ + DM++KGI D + S++ +F ++ A + + K + +
Sbjct: 271 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 330
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+V+ ++ YIE G E+ +VE MKN+ ++ S +++ G + A ++
Sbjct: 331 AQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 390
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L +QG P V+Y +II+A C G KA ++ EM + G + Y ++V+ G
Sbjct: 391 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 450
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
R+ D L +M K EP+ IY ++D + R +N
Sbjct: 451 RVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 486
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 136/317 (42%), Gaps = 38/317 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++M G+V + Y +++ K GD E A F + D + Y +L
Sbjct: 36 LKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE---AGFRLRDQMLHDGPKPNIVTYNVL 92
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L ++GR E +M + D Y+ L E + LF E+ +KG+
Sbjct: 93 LSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGV 152
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ L+ ++G V K +V+E + + L + I ++NG+ + R A
Sbjct: 153 MLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFC 212
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++EQ+ S+ P +TY ++IN C++ + +KAE + +EM++ G D V +++++ YG
Sbjct: 213 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 272
Query: 247 KTGRIRDAMRLVAKMKPKGCE-----------------------------------PNVW 271
G++ +++ M+ KG + PN
Sbjct: 273 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 332
Query: 272 IYNSLMDMHGRAKNLRQ 288
+YNS++D + + + Q
Sbjct: 333 VYNSIIDAYIESGDTEQ 349
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 132/302 (43%), Gaps = 16/302 (5%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y ++ L +SG+ + LK F +M + G++ + Y ++I +++
Sbjct: 13 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 72
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L + G ++ + L+ G +++T +++ M + + ++ +G +
Sbjct: 73 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ + ++ + + +G + G T + ++N C+ G +KAE+V + G V
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL------MDMHGRAKNL---- 286
Y++++ Y + +R A + +MK + P+ YN+L ++M +A++L
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 252
Query: 287 ------RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
+E + T+I AY A + + C ++ + G D G +V F K +I
Sbjct: 253 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 312
Query: 341 EE 342
E
Sbjct: 313 PE 314
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 129/304 (42%), Gaps = 19/304 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M S + D Y + + + G+S + +LF E + + L + IL + L
Sbjct: 110 DEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML---GAYTCSILLNGL 166
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G+ + + + G++ +Y +LI + + +++ A +F++ + + + D
Sbjct: 167 CKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDH 226
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + MV K ++V M+ + ++ S +++ + V
Sbjct: 227 ITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD 286
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G +++ S++ A+C+ G +A + +M K Y+S++ Y ++G
Sbjct: 287 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 346
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
A LV KMK G ++ YN L+ R+ + + E+ Y T
Sbjct: 347 TEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 406
Query: 295 VISA 298
+ISA
Sbjct: 407 IISA 410
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 93/219 (42%), Gaps = 3/219 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ GI D + +++AF K G + A+ + + D+ P++ +Y + D+ +
Sbjct: 287 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK--DVAPNA-QVYNSIIDAYIE 343
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
SG + MK G+ Y L+ +++ AEEL +G+ D+
Sbjct: 344 SGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVS 403
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ +G +K LE+++ M + + +V+ + +Y+Q++
Sbjct: 404 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQML 463
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ P Y +++AY R SK + EM +KG
Sbjct: 464 HKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+++ G+ D Y I+ A GD++K AL L E K + P+ Y L +L
Sbjct: 392 LRNQGLRPDVVSYNTIISACCNKGDTDK--ALELLQEMNKYGIRPT-LRTYHTLVSALAS 448
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+GR ++ ++ M K + S+Y ++ ++ L KE EKG+ D
Sbjct: 449 AGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++K G D Y +M K+G++ AA+ L + + P+ Y +
Sbjct: 202 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS--AAIRLLRSMVQKNCRPNVI-AYNTI 258
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + E F +M KGI D Y SLI + ++ E K L E +
Sbjct: 259 IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 318
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ ++ VF +V +EGM+ +VV+ M + +++G R AVK
Sbjct: 319 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVK 378
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++ ++ +GC+P +Y +IN YC+I KA + +M +G V Y++++
Sbjct: 379 VFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLC 438
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR++ A+ L +M G P++ Y L+D
Sbjct: 439 HVGRLQHAIALFHEMVASGQIPDLVTYRILLD 470
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 123/310 (39%), Gaps = 32/310 (10%)
Query: 57 PSSTHMYKILCDS---LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
P + IL +S L + G AF +L + + G D + + +LI ++
Sbjct: 144 PPDVYTLNILINSFCHLRRLGYAFSVLA---KLLKLGCQPDNTTFNTLIRGLCVEGKIGE 200
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVI 171
A LF + +G D+ + L+ + G + ++ SM KN N+ I
Sbjct: 201 ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNV--IAYNTI 258
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ K R A ++ ++I++G P TY S+I+A C + + + EM
Sbjct: 259 IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 318
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH----------- 280
VV +S++V K G I A +V M +G EP+V Y +LMD H
Sbjct: 319 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVK 378
Query: 281 --------GRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
G N+R Y +I+ Y + D + + + G + D ++
Sbjct: 379 VFDTMVHKGCVPNVR---SYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIH 435
Query: 333 VFSKLSQIEE 342
+ +++
Sbjct: 436 GLCHVGRLQH 445
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 151/331 (45%), Gaps = 19/331 (5%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q ++ M AGI Y +++ K GD E LF++ R++ L+P
Sbjct: 210 NGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQM--REMGLSPDVV- 266
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D GK G E+ F +MK+ G + D Y LI + ++ A E F E
Sbjct: 267 TYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM 326
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G+ ++ + L+ + +EGM++ ++++ M+ L ++ +++ K
Sbjct: 327 KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNL 386
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K+ ++ G VTY ++++ C+ G +AE+VF M + G Y+++
Sbjct: 387 TEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTAL 446
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----LEKY----- 292
V Y K R+ DAM+++ +M +P++ +Y S++ H + L + LE+
Sbjct: 447 VHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGI 506
Query: 293 -------TTVISAYNMAREFDMCVKFYNEFR 316
TT+I AY A + + F+ E +
Sbjct: 507 SANPVISTTIIDAYFKAGKSSDALNFFQEMQ 537
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 158/355 (44%), Gaps = 19/355 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + M+ G++ + Y +++A K G+ + L + + L + Y
Sbjct: 352 QGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT---Y 408
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D L K+GR E + FR M + GI + VY +L+ + ++ A ++ K+ E
Sbjct: 409 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 468
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ DL ++ ++ + + +E+T ++E MK+ ++ + IS I++ + K
Sbjct: 469 CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD 528
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ ++++ G VTY +I+ C G+ A F M G V Y+S++
Sbjct: 529 ALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLID 588
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ--------------- 288
I A +L +M+ +G P++ + +L+D + + NL++
Sbjct: 589 GLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 648
Query: 289 -LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
L YT+++S ++ E KF+NE G + + + ++ + K Q++E
Sbjct: 649 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDE 703
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 113/271 (41%), Gaps = 40/271 (14%)
Query: 22 SGCYCQIMEAFYKIGDSEKVAALFLECESRKLDL-TPSSTHMYKILCDSLGKSGRAFEIL 80
SG + + F ++G E+ EC SR + T L L KSG +
Sbjct: 160 SGVFDVLFSVFVELGLLEEAN----ECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 215
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
KFF DM GI Y +I +++ + LF + E G+ D+ + L+ Y
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G +E+ + MK+ GC+P
Sbjct: 276 GKVGSLEEVASLFNEMKDV-----------------------------------GCVPDI 300
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
+TY +IN YC+ +A + F EM+ G VV YS+++ + K G ++ A++L+
Sbjct: 301 ITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXD 360
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
M+ G PN + Y SL+D + +A NL + K
Sbjct: 361 MRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 391
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 126/302 (41%), Gaps = 34/302 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--------------------CE 49
+ +M+ G+ D Y +++ + K+G E+VA+LF E C+
Sbjct: 253 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 312
Query: 50 SRKLD-------------LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
K+ L P+ Y L D+ K G +K DM+ G+L +
Sbjct: 313 FEKMPRAFEYFSEMKNNGLKPNVV-TYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEF 371
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
Y SLI + + A +L + + G+ ++ + L+ + G + + EV SM
Sbjct: 372 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 431
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
++ + + +V+G+ K A+K+ +Q+ P + Y SII +C
Sbjct: 432 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 491
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+ + + EM+ +G V ++++ Y K G+ DA+ +M+ G E + Y L
Sbjct: 492 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 551
Query: 277 MD 278
+D
Sbjct: 552 ID 553
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 107/221 (48%), Gaps = 3/221 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+MKS GI + I++A++K G S F E + ++ T + Y +L D L
Sbjct: 499 EEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVT---YCVLIDGL 555
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G + +F M G+ + +VY SLI ++ A++LF E + +GM D+
Sbjct: 556 CEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDI 615
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ ++ G +++ L ++ M + + +V+GFS+ A K + +
Sbjct: 616 TAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNE 675
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+I +G +P +V ++ Y + G +A ++ EM++ +
Sbjct: 676 MIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMAY 716
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++K G D Y +M K+G++ AA+ L + + P+ Y +
Sbjct: 240 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS--AAIRLLRSMVQKNCRPNVI-AYNTI 296
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + E F +M KGI D Y SLI + ++ E K L E +
Sbjct: 297 IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 356
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ ++ VF +V +EGM+ +VV+ M + +++G R AVK
Sbjct: 357 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVK 416
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++ ++ +GC+P +Y +IN YC+I KA + +M +G V Y++++
Sbjct: 417 VFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLC 476
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR++ A+ L +M G P++ Y L+D
Sbjct: 477 HVGRLQHAIALFHEMVASGQIPDLVTYRILLD 508
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 123/310 (39%), Gaps = 32/310 (10%)
Query: 57 PSSTHMYKILCDS---LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
P + IL +S L + G AF +L + + G D + + +LI ++
Sbjct: 182 PPDVYTLNILINSFCHLRRLGYAFSVLA---KLLKLGCQPDNTTFNTLIRGLCVEGKIGE 238
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVI 171
A LF + +G D+ + L+ + G + ++ SM KN N+ I
Sbjct: 239 ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNV--IAYNTI 296
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ K R A ++ ++I++G P TY S+I+A C + + + EM
Sbjct: 297 IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 356
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH----------- 280
VV +S++V K G I A +V M +G EP+V Y +LMD H
Sbjct: 357 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVK 416
Query: 281 --------GRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
G N+R Y +I+ Y + D + + + G + D ++
Sbjct: 417 VFDTMVHKGCVPNVR---SYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIH 473
Query: 333 VFSKLSQIEE 342
+ +++
Sbjct: 474 GLCHVGRLQH 483
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 101/217 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL + + R + + M +G++ D Y +LI + ++ A LF E
Sbjct: 433 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 492
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G + DL + L+ + + + + ++++++ + L+ + + ++G +
Sbjct: 493 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 552
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AA ++ L S+G P TY +I+ C+ GL +A K+F +M + G + Y++++
Sbjct: 553 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTII 612
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ ++ A +L+ +M +G +V +++M
Sbjct: 613 RGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEM 649
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 90/214 (42%), Gaps = 7/214 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--CESRKLDLTPSSTHMYKILCD 68
E+M G++ D+ Y ++ +G + ALF E + DL Y+IL D
Sbjct: 454 EQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLV-----TYRILLD 508
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K+ E + + ++ + D VY I E++ A +LF KG+
Sbjct: 509 YLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQP 568
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + ++ + G++++ ++ M + CI I+ GF + + A ++
Sbjct: 569 DVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLL 628
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
++++++G T I+ GL E++
Sbjct: 629 QEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERL 662
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 36/269 (13%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S + ++ LGK GRA D++ G+ D Y SLI ++AS + A +F
Sbjct: 184 SNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVF 243
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMV-------------------------------- 146
K+ EE+G L + ++ +Y + GM
Sbjct: 244 KKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRR 303
Query: 147 ----EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
E+ EV E MK A + +++ + K R A++V +++ + G P VT
Sbjct: 304 GSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVT 363
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y S+I+AY R GL +A ++ +M +KG V Y+++++ + KTG+ AM++ +M+
Sbjct: 364 YNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR 423
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
GC+PN+ +N+L+ MHG N ++ K
Sbjct: 424 VAGCQPNICTFNALIKMHGNRGNFVEMMK 452
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 13/274 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSST-HMYKI 65
Y +M AG+ D Y ++ A + G SEKV A + + +LT S H Y
Sbjct: 524 YRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYA- 582
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVY-ASLICSFASIAEVKVAEELFKEAEEK 124
+G+ E + + GI+E +V +L+ ++ + E F E E+
Sbjct: 583 -------NGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQ 635
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G D+ +V +Y MV KT E++ +K++ S ++ +S+ + +
Sbjct: 636 GFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKS 695
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++I++G P +++ ++I AYCR G +A ++F EM+ G V+ Y++ +A
Sbjct: 696 EDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIAS 755
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y +A+ +V M GC+PN YNSL+D
Sbjct: 756 YASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLID 789
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 133/281 (47%), Gaps = 3/281 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ MKS+G+ D Y ++ + + E+ A +F E ++ +P Y L D
Sbjct: 280 DSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKA--AGFSPDKV-TYNALLDVY 336
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GKS R E ++ ++M+ G Y SLI ++A + A EL + +KG+ D+
Sbjct: 337 GKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDV 396
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + + G + ++V E M+ A + C ++ R + +KV+E+
Sbjct: 397 FTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEE 456
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ C+P VT+ +++ + + G+ S+ VF EM++ GF ++++++ Y + G
Sbjct: 457 IKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGF 516
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
AM + +M G P++ YN+++ R Q EK
Sbjct: 517 FDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEK 557
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 112/228 (49%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L G++G E+ F++MK G + + + +LI +++ A +++
Sbjct: 469 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRML 528
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G+ DL + ++ G+ E++ +V+ MK+ ++ C +++ ++ +
Sbjct: 529 DAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVE 588
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ E++ S P V +++ Y + L ++ E+ F+E++++GF + ++MV
Sbjct: 589 RMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMV 648
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
++YG+ + ++ +K G P++ YNSLM M+ R ++ + E
Sbjct: 649 SIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSE 696
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 128/285 (44%), Gaps = 13/285 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MK+AG D Y +++ + K + + E E+ PS Y L +
Sbjct: 314 FEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEAS--GFAPSIV-TYNSLISA 370
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G E ++ M +KGI D Y +L+ F + A ++F+E G +
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPN 430
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG-----FSKRRAYWAA 184
+ F L+ M+ G + ++V E E+ I +C+ ++ F +
Sbjct: 431 ICTFNALIKMHGNRGNFVEMMKVFE-----EIKICECVPDIVTWNTLLAVFGQNGMDSEV 485
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V++++ G +P + T+ ++I+AY R G + +A ++ M G + Y++++A
Sbjct: 486 SGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAA 545
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+ G + +++A+MK C+PN Y SL+ + K + ++
Sbjct: 546 LARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERM 590
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
EIL F +D G + Y SL+ ++ + +E++ +E KGM D+ F ++
Sbjct: 662 EILNFIKD---SGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVI 718
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
Y G +++ + MK+ L + ++ + A+ V + +I GC
Sbjct: 719 FAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCK 778
Query: 198 PGQVTYASIINAYCRIGLYSKA 219
P Q TY S+I+ +C++ +A
Sbjct: 779 PNQNTYNSLIDWFCKLNRRDEA 800
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 163 ISDCISCVIVNGFSKR-RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
+S+ + VI++ K RA +AA +++ L + G Y S+I AY G Y +A
Sbjct: 183 LSNSVVAVIISVLGKEGRASFAASLLHD-LRNDGVHIDIYAYTSLITAYASNGRYREAVM 241
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR-LVAKMKPKGCEPNVWIYNSLM 277
VF +++++G ++ Y+ ++ +YGK G + LV MK G P+++ YN+L+
Sbjct: 242 VFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLI 298
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 108/252 (42%), Gaps = 15/252 (5%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
YC ++ A+ + E+++AL E S ++ P + + K L KS E + F
Sbjct: 573 TYCSLLHAYANGKEVERMSALAEEIYSGIIE--PQAV-LLKTLVLVYSKSDLLTETERAF 629
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+++E+G D + +++ + V E+ ++ G L + L+ MY
Sbjct: 630 LELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRT 689
Query: 144 GMVEKTLEVV-----ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
EK+ +++ + MK ++ + I NG K A +++ ++ G P
Sbjct: 690 EHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKE-----ASRIFAEMKDFGLAP 744
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
+TY + I +Y ++ +A V M + G Y+S++ + K R +A +
Sbjct: 745 DVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFI 804
Query: 259 AKMKPKGCEPNV 270
+ + + +P+V
Sbjct: 805 SNL--RNLDPSV 814
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 140/313 (44%), Gaps = 23/313 (7%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILCDSLGKSGRAFEILKF 82
Y IM + G SEK +F RK+ D Y L D L K+G+ E K
Sbjct: 80 YNSIMHGYCSSGQSEKAIGIF-----RKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKI 134
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F M ++G+ D + Y +L+ +AS + +L + GM D VF L+ Y +
Sbjct: 135 FDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTK 194
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
+ V++ + V M+ L + +++G K A+ +EQ+I +G P V
Sbjct: 195 QEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVV 254
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y S+I+A C + KAE++ E+ +G + +V +++++ K GR+ ++ +L +
Sbjct: 255 YTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLG 314
Query: 263 PKGCEPNVWIYNSLMD-------MHGRAKNLRQLEK---------YTTVISAYNMAREFD 306
G P+V Y++L+D M G K L + Y+T+I+ Y +
Sbjct: 315 HIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRME 374
Query: 307 MCVKFYNEFRMNG 319
+ + E NG
Sbjct: 375 DALALFKEMESNG 387
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 134/267 (50%), Gaps = 4/267 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G+ LD + ++ A+ K ++V +F + R+ LTP++ + Y+ + D L K
Sbjct: 173 MVQNGMQLDHHVFNILICAYTKQEKVDEVVLVF--SKMRQQGLTPNAVN-YRTVIDGLCK 229
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR + + F M +KG+ + VY SLI + + + + AEEL E ++G+ ++
Sbjct: 230 LGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVF 289
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F ++ +EG V ++ ++ + + + +N +++G+ A+K+ ++
Sbjct: 290 FNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMV 349
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G P VTY+++IN YC+I A +F EM+ G + ++ Y+ ++ +T R
Sbjct: 350 SVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTA 409
Query: 253 DAMRLVAKMKPKGCEPNVWIYN-SLMD 278
A L A++ G + + YN LMD
Sbjct: 410 AAKELYARITESGTQLELSTYNIILMD 436
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+EG V+K M + ++ I+ SK +A A++V ++ C
Sbjct: 23 KEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMVMPNCF---- 78
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY SI++ YC G KA +F +M G + VV Y+S++ K G+ +A ++ M
Sbjct: 79 TYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSM 138
Query: 262 KPKGCEPNVWIYNSLMDMHGRA----------------KNLRQLEK--YTTVISAYNMAR 303
+G +P++ Y +L +HG A +N QL+ + +I AY
Sbjct: 139 VKRGLKPDITTYGTL--LHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQE 196
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ D V +++ R G + ++ KL ++++
Sbjct: 197 KVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDD 235
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 20/190 (10%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
I++G K A Y +++ + P VTY SII A + +A +V M
Sbjct: 16 TIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMVMP 75
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNL 286
Y+S++ Y +G+ A+ + KM G EP+V YNSLMD +G+
Sbjct: 76 N----CFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEA 131
Query: 287 RQ-------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
R+ + Y T++ Y NG +D + I++
Sbjct: 132 RKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICA 191
Query: 334 FSKLSQIEEL 343
++K +++E+
Sbjct: 192 YTKQEKVDEV 201
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 3/203 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M G+ + Y ++ A EK L E + ++ P+ IL DS
Sbjct: 240 FEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGIN--PNIVFFNTIL-DS 296
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K GR E K F + G+ D Y++LI + ++ A +L G+ D
Sbjct: 297 LCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPD 356
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y + +E L + + M++ +N +I++G + R AA ++Y
Sbjct: 357 SVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYA 416
Query: 190 QLISQGCIPGQVTYASIINAYCR 212
++ G TY I+ + +
Sbjct: 417 RITESGTQLELSTYNIILMDFAK 439
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C P V+Y +II+ + G KA + EM + V Y+S++A K + AM
Sbjct: 7 CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ M PN + YNS+ MHG
Sbjct: 67 EVLTVM----VMPNCFTYNSI--MHG 86
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 154/333 (46%), Gaps = 21/333 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++E + + E+ LF E + ++ ++Y + + K G F
Sbjct: 265 YTMLIEWYSRSSKIEEAEKLFDEMLKKGIE---PDVYIYTSIINWNCKFGNMKRAFVLFD 321
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M E+ ++ + Y +LI E+K AE + + + KG+ + +F L+ Y ++G
Sbjct: 322 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG 381
Query: 145 MVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
M+++ L + M+ I D +C +I +GF + A ++ + +G P V++
Sbjct: 382 MIDEALRLQNIMQQKGFEI-DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSF 440
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+ +I+ YC+ +++A ++F M++KG VV Y++ + Y K G++ +A +L+ +M+
Sbjct: 441 SILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQE 500
Query: 264 KGCEPNVWIYNSLMDMHGRAKNL----------------RQLEKYTTVISAYNMAREFDM 307
+G P+ + Y SL+D + N+ R + YT +IS + D
Sbjct: 501 RGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADE 560
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
K Y+E G V D + ++ K+ +
Sbjct: 561 AFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%)
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
E+F A +KG D + +L G +E +E + M ++ + I C +V+G
Sbjct: 143 EVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGL 202
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K+ A + ++L+ +G P +TY +++N Y I ++ M++ D V
Sbjct: 203 CKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNV 262
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
Y+ ++ Y ++ +I +A +L +M KG EP+V+IY S+++ + + N+++
Sbjct: 263 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKR 315
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 142/293 (48%), Gaps = 9/293 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--CESRKLDLTPSSTHMYK 64
+ + +M +GI + + +++ K G+ + AL E C+ K + +T +
Sbjct: 177 VEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG 236
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILE-DPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ + G EIL EK +++ + + Y LI ++ ++++ AE+LF E +
Sbjct: 237 YI--EIKDVGGVNEILSLM----EKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLK 290
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ D+ ++ ++ + G +++ + + M L + ++NG K A
Sbjct: 291 KGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKA 350
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A + + S+G +V + ++++ YC+ G+ +A ++ MQQKGF+ + + +
Sbjct: 351 AEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIAS 410
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
+ ++ R +A RL+ M+ +G PNV ++ L+D++ + +N + + V+
Sbjct: 411 GFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVM 463
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+L +SG ++F R M + GI + +++ EV A+ L E KG
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 225
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ YIE V E++ M+ ++ + +++ +S+ A K++
Sbjct: 226 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 285
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++ +G P Y SIIN C+ G +A +F EM ++ Y +++ K
Sbjct: 286 DEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 345
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G ++ A +V M+ KG + N I+N+LMD
Sbjct: 346 GEMKAAEMMVNDMQSKGVDVNRVIFNTLMD 375
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 1/234 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L+P + + IL ++L K G ++ F +MK G D Y LI S+ ++ A
Sbjct: 401 LSPD-VYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNA 459
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+L KE E G R + ++ ++ +E+ EV + M ++ S +++G
Sbjct: 460 LDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDG 519
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K + A ++ EQ++ +G P +TY SI+ YC+ G KA + M GF+
Sbjct: 520 LCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEID 579
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
VV Y +++ K GR + A++L+ M+ KG P YN ++ R NLR
Sbjct: 580 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRD 633
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ T +Y L + L + R + + +M ++GI D +LI + +V+ A +
Sbjct: 158 ADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLM 217
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+E + D F L+ +IEEG +E L V M + + V++NG+ K
Sbjct: 218 LEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCK 277
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A+ ++ I+ G P QVTY + ++ C+ G S A KV M Q+G D V
Sbjct: 278 MGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFT 337
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y++++ K G + +A +V +M +GC P+ +N+L+
Sbjct: 338 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI 377
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 110/226 (48%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + L K+G E M ++G L D + + +LI + S ++ A +L +E
Sbjct: 338 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELT 397
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ F L+ + G + + E MK++ + ++++
Sbjct: 398 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLV 457
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + +++ S GC VTY +II+A C+ +AE+VF +M G + V +++++
Sbjct: 458 NALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLI 517
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
K RI DA L+ +M +G +P+ YNS++ + + +L++
Sbjct: 518 DGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKK 563
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 3/270 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ G+ D + ++ A K+GD LF E +S P Y
Sbjct: 387 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGC--APDEV-TY 443
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL D L G+ L ++M+ G Y ++I + ++ AEE+F + +
Sbjct: 444 NILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDA 503
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ R F L+ + ++ E++E M L S+ I+ + K+
Sbjct: 504 HGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKK 563
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A + E + + G VTY ++IN C+ G A K+ M+ KG AY+ ++
Sbjct: 564 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 623
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
+ +RDA+ L +M G P+ Y
Sbjct: 624 SLFRRNNLRDALSLFREMTEVGEPPDALTY 653
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 94/189 (49%)
Query: 90 GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKT 149
G+ D +VY L+ A + +K+ E ++ E ++G+ D+ L+ V
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTA 214
Query: 150 LEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
+ ++E M + + + ++ GF + + AA++V +++ GC P +VT +IN
Sbjct: 215 VLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLING 274
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
YC++G A + GF+ V Y++ V + G + A++++ M +G +P+
Sbjct: 275 YCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPD 334
Query: 270 VWIYNSLMD 278
V+ YN++++
Sbjct: 335 VFTYNTVIN 343
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 1/222 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P +T + L +L R E L R++ KG+ D + LI + + + +
Sbjct: 368 PDTT-TFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 426
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF+E + G D + L+ G + L++++ M++ S I++
Sbjct: 427 LFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALC 486
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K+ A +V++Q+ + G VT+ ++I+ C+ A ++ +M ++G +
Sbjct: 487 KQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNI 546
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y+S++ Y K G ++ A ++ M G E +V Y +L++
Sbjct: 547 TYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLIN 588
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 131/294 (44%), Gaps = 5/294 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M S + D + +M+ F + G E AAL ++ + + +P+ + +L +
Sbjct: 219 EEMSSHAVAPDETTFTTLMQGFIEEGSIE--AALRVKTKMMETGCSPTRVTV-NVLINGY 275
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR + L + + G D Y + + V A ++ ++G D+
Sbjct: 276 CKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDV 335
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAE-LNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + G +++ +V M + L + + +IV S+ R A+ +
Sbjct: 336 FTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNR-LEEALDLAR 394
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L +G P T+ +INA C++G ++F EM+ G V Y+ ++ G
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMG 454
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
++ +A+ L+ +M+ GC + YN+++D + + + E+ + A+ ++R
Sbjct: 455 KLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISR 508
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 132/268 (49%), Gaps = 9/268 (3%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFY---KIGDSEKVAALFLECESRKLDLTPSSTHMYKI 65
Y ++M + GIV Y ++ A + +I ++E + E R+ + P Y I
Sbjct: 344 YRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIK-----EMREKGVEPDVV-TYNI 397
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+ + G A + L F +M EK I Y SLI F + AEE FK++ ++G
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
ML D+ +F L+ + G +++ ++++ M NA++ + ++ G+ + R A
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAK 517
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K+ +++ +G P ++Y ++I+ Y + G A +VF EM GFD ++ Y++++ Y
Sbjct: 518 KLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGY 577
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
K G A L+ +M+ KG P+ Y
Sbjct: 578 SKIGEADHAEELLREMQSKGITPDDSTY 605
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 16/278 (5%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
K F+ MK+K + D Y S I ++ A + + E G++ + + L+
Sbjct: 273 KIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGC 332
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+G ++K + M N + S ++++ + A + +++ +G P
Sbjct: 333 CNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDV 392
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY IN YCR G KA +F EM +K V Y+S++ ++GK R+ +A K
Sbjct: 393 VTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKK 452
Query: 261 MKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK-------------YTTVISAYNMARE 304
+G P++ ++N+L+D H G QL K + T++ Y R+
Sbjct: 453 SIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERK 512
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ K +E + G D ++ +SK +++
Sbjct: 513 VEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKD 550
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 107/234 (45%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
SS + I+ + L + G+ + F M+ G+ + Y ++I + + + A ++
Sbjct: 215 SSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKI 274
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
FK ++K + D + + +E +E+ V+ + + L + +++G
Sbjct: 275 FKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCN 334
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++++++G + TY +I+A +AE + EM++KG + VV
Sbjct: 335 KGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVT 394
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
Y+ + Y + G + A+ L +M K P V Y SL+D+ G+ + + E+
Sbjct: 395 YNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEE 448
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/318 (16%), Positives = 134/318 (42%), Gaps = 19/318 (5%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ G+ + Y ++ + G E + +F + + L + Y L K
Sbjct: 243 MEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLK---PDCYTYNSFISRLCK 299
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R E + E G++ + Y +LI + ++ A E +G++ +
Sbjct: 300 ERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFT 359
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ E +E+ ++++ M+ + + +NG+ + A+ ++++++
Sbjct: 360 YNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMV 419
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+ P TY S+I+ + + S+AE+ F + ++G ++ +++++ + G I
Sbjct: 420 EKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNID 479
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVI 296
A +L+ +M P+ +N+LM + R + + + +K Y T+I
Sbjct: 480 RAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLI 539
Query: 297 SAYNMAREFDMCVKFYNE 314
S Y+ + ++ ++E
Sbjct: 540 SGYSKRGDMKDALEVFDE 557
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 95/234 (40%), Gaps = 38/234 (16%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+ G+ D Y + + + G+++K +LF E + + T Y L D
Sbjct: 381 KEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPT---VETYTSLIDVF 437
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK R E + F+ ++G+L D ++ +LI + A +L KE + ++ D
Sbjct: 438 GKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDE 497
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ Y E VE+ ++++ MK + +++G+SKR A++V+++
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDE 557
Query: 191 LIS-----------------------------------QGCIPGQVTYASIINA 209
++S +G P TY +I A
Sbjct: 558 MLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM-YKILCDS 69
++M +A +V D + +M+ + + E+ L E + R + H+ Y L
Sbjct: 486 KEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGI----KPDHISYNTLISG 541
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGML 127
K G + L+ F +M G DP++ Y +LI ++ I E AEEL +E + KG+
Sbjct: 542 YSKRGDMKDALEVFDEMLSLGF--DPTLLTYNALIQGYSKIGEADHAEELLREMQSKGIT 599
Query: 128 RDLEVFLKLV-LMYIEEGMVE 147
D +L ++ M + +VE
Sbjct: 600 PDDSTYLYVIEAMKTNDDLVE 620
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++KM G D Y ++ K+G++ AA+ L + + P + Y +
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS--AAIRLLGSMVQKNCQP-NVFAYNTI 207
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + E F +M KGI D Y SLI + ++ E K L E + +
Sbjct: 208 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ F +V +EG V + +VV+ M + + +++G AVK
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK 327
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++ ++ +GC+P ++Y ++IN YC+I KA +F EM ++ V YS+++
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 387
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
R++DA+ L +M PN+ Y L+D
Sbjct: 388 HVERLQDAIALFHEMVACSQIPNLVTYRILLD 419
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 10/229 (4%)
Query: 57 PSSTHMYKILCDS---LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
P + + IL +S L + G AF +L + + G D + + +LI ++
Sbjct: 93 PPNIYTLHILINSFCHLNRVGFAFSVLA---KILKLGHQPDTATFTTLIRGIYVEGKIGE 149
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVI 171
A LF + +G D+ + L+ + G + ++ SM KN + N+ I
Sbjct: 150 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVF--AYNTI 207
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ K R A ++ +++++G P TY S+I+A C + + + EM
Sbjct: 208 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
VV+++++V K G++ +A +V KM +G EPNV Y +LMD H
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGH 316
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 98/205 (47%), Gaps = 4/205 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K R + + F +M + ++ D Y++LI + ++ A LF E
Sbjct: 344 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 403
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ +L + L+ + + + + ++++++ + L+ ++ + ++G +
Sbjct: 404 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 463
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--FDKCVVAYSS 240
AA ++ L S+G P TY+ +IN CR GL +A K+F EM + G + C+ Y++
Sbjct: 464 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCI--YNT 521
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKG 265
+ + + A++L+ +M +G
Sbjct: 522 ITRGFLRNNETSRAIQLLQEMVARG 546
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 35/143 (24%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI----------------- 213
++ +K + + + + Q+ S G P T +IN++C +
Sbjct: 67 LLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLG 126
Query: 214 -------------GLY-----SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
G+Y +A +F +M +GF VV Y +++ K G A+
Sbjct: 127 HQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAI 186
Query: 256 RLVAKMKPKGCEPNVWIYNSLMD 278
RL+ M K C+PNV+ YN+++D
Sbjct: 187 RLLGSMVQKNCQPNVFAYNTIID 209
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 68/166 (40%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y+IL D L K+ E + + ++ + D V I E++ A +LF
Sbjct: 414 YRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLS 473
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + ++ G++++ ++ M ++ CI I GF +
Sbjct: 474 SKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETS 533
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
A+++ ++++++G T + GL +++ E Q
Sbjct: 534 RAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 36/269 (13%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S + ++ LGK GRA D++ G+ D Y SLI ++AS + A +F
Sbjct: 184 SNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVF 243
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMV-------------------------------- 146
K+ EE+G L + ++ +Y + GM
Sbjct: 244 KKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRR 303
Query: 147 ----EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
E+ EV E MK A + +++ + K R A++V +++ + G P VT
Sbjct: 304 GSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVT 363
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y S+I+AY R GL +A ++ +M +KG V Y+++++ + KTG+ AM++ +M+
Sbjct: 364 YNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR 423
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
GC+PN+ +N+L+ MHG N ++ K
Sbjct: 424 VAGCQPNICTFNALIKMHGNRGNFVEMMK 452
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 133/281 (47%), Gaps = 3/281 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ MKS+G+ D Y ++ + + E+ A +F E ++ +P Y L D
Sbjct: 280 DSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKA--AGFSPDKV-TYNALLDVY 336
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GKS R E ++ ++M+ G Y SLI ++A + A EL + +KG+ D+
Sbjct: 337 GKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDV 396
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + + G + ++V E M+ A + C ++ R + +KV+E+
Sbjct: 397 FTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEE 456
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ C+P VT+ +++ + + G+ S+ VF EM++ GF ++++++ Y + G
Sbjct: 457 IKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGF 516
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
AM + +M G P++ YN+++ R Q EK
Sbjct: 517 FDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEK 557
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 13/274 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSST-HMYKI 65
Y +M AG+ D Y ++ A + G SEKV A + + +LT S H Y
Sbjct: 524 YRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYA- 582
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVY-ASLICSFASIAEVKVAEELFKEAEEK 124
+G+ E + + GI+E +V +L+ ++ + E F E E+
Sbjct: 583 -------NGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQ 635
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G D+ +V +Y MV KT E++ +K++ S ++ +S+ + +
Sbjct: 636 GFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKS 695
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++I++G P +++ ++I AYCR G +A ++F EM+ G V+ Y++ +A
Sbjct: 696 EDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIAS 755
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y +A+ +V M C+PN YNSL+D
Sbjct: 756 YASDSMFIEAIDVVKYMIKNECKPNQNTYNSLID 789
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 112/228 (49%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L G++G E+ F++MK G + + + +LI +++ A +++
Sbjct: 469 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRML 528
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G+ DL + ++ G+ E++ +V+ MK+ ++ C +++ ++ +
Sbjct: 529 DAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVE 588
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ E++ S P V +++ Y + L ++ E+ F+E++++GF + ++MV
Sbjct: 589 RMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMV 648
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
++YG+ + ++ +K G P++ YNSLM M+ R ++ + E
Sbjct: 649 SIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSE 696
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 128/285 (44%), Gaps = 13/285 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MK+AG D Y +++ + K + + E E+ PS Y L +
Sbjct: 314 FEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEAS--GFAPSIV-TYNSLISA 370
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G E ++ M +KGI D Y +L+ F + A ++F+E G +
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPN 430
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG-----FSKRRAYWAA 184
+ F L+ M+ G + ++V E E+ I +C+ ++ F +
Sbjct: 431 ICTFNALIKMHGNRGNFVEMMKVFE-----EIKICECVPDIVTWNTLLAVFGQNGMDSEV 485
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V++++ G +P + T+ ++I+AY R G + +A ++ M G + Y++++A
Sbjct: 486 SGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAA 545
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+ G + +++A+MK C+PN Y SL+ + K + ++
Sbjct: 546 LARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERM 590
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
EIL F +D G + Y SL+ ++ + +E++ +E KGM D+ F ++
Sbjct: 662 EILNFIKD---SGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVI 718
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
Y G +++ + MK+ L + ++ + A+ V + +I C
Sbjct: 719 FAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECK 778
Query: 198 PGQVTYASIINAYCRIGLYSKA 219
P Q TY S+I+ +C++ +A
Sbjct: 779 PNQNTYNSLIDWFCKLNRRDEA 800
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 163 ISDCISCVIVNGFSKR-RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
+S+ + VI++ K RA +AA +++ L + G Y S+I AY G Y +A
Sbjct: 183 LSNSVVAVIISVLGKEGRASFAASLLHD-LRNDGVHIDIYAYTSLITAYASNGRYREAVM 241
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR-LVAKMKPKGCEPNVWIYNSLM 277
VF +++++G ++ Y+ ++ +YGK G + LV MK G P+++ YN+L+
Sbjct: 242 VFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLI 298
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 154/333 (46%), Gaps = 21/333 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++E + + E+ LF E + ++ ++Y + + K G F
Sbjct: 261 YTMLIEWYSRSSKIEEAEKLFDEMLKKGIE---PDVYIYTSIINWNCKFGNMKRAFVLFD 317
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M E+ ++ + Y +LI E+K AE + + + KG+ + +F L+ Y ++G
Sbjct: 318 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG 377
Query: 145 MVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
M+++ L + M+ I D +C +I +GF + A ++ + +G P V++
Sbjct: 378 MIDEALRLQNIMQQKGFEI-DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSF 436
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+ +I+ YC+ +++A ++F M++KG VV Y++ + Y K G++ +A +L+ +M+
Sbjct: 437 SILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQE 496
Query: 264 KGCEPNVWIYNSLMDMHGRAKNL----------------RQLEKYTTVISAYNMAREFDM 307
+G P+ + Y SL+D + N+ R + YT +IS + D
Sbjct: 497 RGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADE 556
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
K Y+E G V D + ++ K+ +
Sbjct: 557 AFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%)
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
E+F A +KG D + +L G +E +E + M ++ + I C +V+G
Sbjct: 139 EVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGL 198
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K+ A + ++L+ +G P +TY +++N Y I ++ M++ D V
Sbjct: 199 CKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNV 258
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
Y+ ++ Y ++ +I +A +L +M KG EP+V+IY S+++ + + N+++
Sbjct: 259 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKR 311
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 142/293 (48%), Gaps = 9/293 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--CESRKLDLTPSSTHMYK 64
+ + +M +GI + + +++ K G+ + AL E C+ K + +T +
Sbjct: 173 VEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG 232
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILE-DPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ + G EIL EK +++ + + Y LI ++ ++++ AE+LF E +
Sbjct: 233 YI--EIKDVGGVNEILSLM----EKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLK 286
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ D+ ++ ++ + G +++ + + M L + ++NG K A
Sbjct: 287 KGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKA 346
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A + + S+G +V + ++++ YC+ G+ +A ++ MQQKGF+ + + +
Sbjct: 347 AEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIAS 406
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
+ ++ R +A RL+ M+ +G PNV ++ L+D++ + +N + + V+
Sbjct: 407 GFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVM 459
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+L +SG ++F R M + GI + +++ EV A+ L E KG
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 221
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ YIE V E++ M+ ++ + +++ +S+ A K++
Sbjct: 222 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 281
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++ +G P Y SIIN C+ G +A +F EM ++ Y +++ K
Sbjct: 282 DEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 341
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G ++ A +V M+ KG + N I+N+LMD
Sbjct: 342 GEMKAAEMMVNDMQSKGVDVNRVIFNTLMD 371
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 156/351 (44%), Gaps = 23/351 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+S G+ G Y +++ GD KV ++F E + + + + Y + ++
Sbjct: 192 KEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNV---AGDVYFYSAVINAY 248
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G + F + GI + Y +LI F I +++ AE L + + +G+ +
Sbjct: 249 CRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQ 308
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+F ++ Y GMV+K LE+ M+ + + + G + A K+
Sbjct: 309 IIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHI 368
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G V+Y ++I+ + + G +A ++F +M+ KG VV Y+ M+ Y K+G
Sbjct: 369 MTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGS 428
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------LRQLEK------------Y 292
IR+A R +M+ KG P+V+ Y +L +HG N LR E+ Y
Sbjct: 429 IREAERFKKEMEKKGLVPDVYTYAAL--VHGHCVNGKVDVALRLFEEMKQRGAKPNVVAY 486
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
T +IS + +FY+ G D + ++VG + +E+
Sbjct: 487 TALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKDEI 537
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 149/360 (41%), Gaps = 89/360 (24%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ L++ CY +++ + + + +VA + E ES ++ T + Y IL D L
Sbjct: 157 DEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGT---YTILVDGL 213
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+G ++ F ++K K + D Y+++I ++ V+ A E+F E G
Sbjct: 214 STAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNG----- 268
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+E E A ++NGF K AA +
Sbjct: 269 -------------------IEPNERTYGA-----------LINGFCKIGQIEAAEMLLTD 298
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKA-------EKVFIE------------------ 225
+ +G Q+ + ++I+ YCR G+ KA E++ I+
Sbjct: 299 MQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNR 358
Query: 226 ----------MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
M + G + V+Y+++++++ K G + +A RL M+ KG P+V YN
Sbjct: 359 MEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNV 418
Query: 276 LMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
++D + ++ ++R+ E+ Y ++ + + + D+ ++ + E + G
Sbjct: 419 MIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRG 478
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 101/222 (45%), Gaps = 3/222 (1%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TP S ++ D K+GR + + +M G+ + Y L+ ++
Sbjct: 131 ITPLSA---SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARV 187
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
E+ KE E G+ + + LV G + K V + +K + ++N
Sbjct: 188 AEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINA 247
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+ + A +V+++ + G P + TY ++IN +C+IG AE + +MQ +G
Sbjct: 248 YCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHN 307
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+ +++M+ Y + G + A+ + A M+ G + +V+ YN+L
Sbjct: 308 QIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTL 349
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 7/266 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH--MYKILCDSLGKSGRAFEILKF 82
Y I+ K+GD+E L K++ T H +Y + D L K G
Sbjct: 44 YGTIINGLCKMGDTESALNLL-----SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNL 98
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F +M +KGI D Y+ +I SF AE+L ++ E+ + D+ F L+ ++
Sbjct: 99 FTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVK 158
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
EG V + E+ M + + +++GF K+ A ++ + + S+ C P VT
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVT 218
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
++++IN YC+ ++F EM ++G V Y++++ + + G + A L+ M
Sbjct: 219 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G PN + S++ K LR+
Sbjct: 279 SSGVAPNYITFQSMLASLCSKKELRK 304
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 109/225 (48%), Gaps = 6/225 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L + L GR + L M E+G P Y ++I + + + A L + E
Sbjct: 13 FTTLMNGLCCEGRVLQALALVDRMVEEG--HQP--YGTIINGLCKMGDTESALNLLSKME 68
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
E + + ++ ++ ++G + M + + D I+ +++ F + +
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGI-FPDVITYSGMIDSFCRSGRW 127
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++ +I + P VT++++INA + G S+AE+++ +M ++G + Y+SM
Sbjct: 128 TDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSM 187
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ + K R+ DA R++ M K C P+V +++L++ + +AK +
Sbjct: 188 IDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRV 232
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 116/261 (44%), Gaps = 3/261 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
+++S L+ KM+ I Y I++ K G LF E + + P
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGI--FPDVI- 112
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + DS +SGR + + RDM E+ I D +++LI + +V AEE++ +
Sbjct: 113 TYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDM 172
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ + ++ + ++ + +++SM + + ++NG+ K +
Sbjct: 173 LRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRV 232
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
++++ ++ +G + VTY ++I+ +C++G A+ + M G + + SM
Sbjct: 233 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSM 292
Query: 242 VAMYGKTGRIRDAMRLVAKMK 262
+A +R A ++ ++
Sbjct: 293 LASLCSKKELRKAFAILEDLQ 313
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 91/219 (41%), Gaps = 3/219 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M GI D Y ++++F + G L + R+++ P + L ++
Sbjct: 99 FTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQIN--PDVV-TFSALINA 155
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ E + + DM +GI Y S+I F + A+ + K D
Sbjct: 156 LVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPD 215
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ Y + V+ +E+ M + + +++GF + AA +
Sbjct: 216 VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLN 275
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+IS G P +T+ S++ + C KA + ++Q+
Sbjct: 276 VMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ GC P VT+ +++N C G +A + M ++G Y +++ K G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNL 286
A+ L++KM+ + +V IYN+++D H A+NL
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNL 98
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 7/273 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYK 64
LH+++K+ + G LD Y ++ K G+++ VA L LE S K DL MY
Sbjct: 151 LHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLV-----MYT 205
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ L K+ + + +M KGI + Y +LI F + +K A L E + K
Sbjct: 206 TIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLK 265
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ D+ F L+ +EG +++ + + E MK+ + + +++G K A
Sbjct: 266 NINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERA 325
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ + +++ QG P +Y +++A C+ G A++ F + KG+ V Y+ M+
Sbjct: 326 IALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMING 385
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G D M L +KM+ KGC PN + +++
Sbjct: 386 LCKAGLFGDVMDLKSKMEGKGCMPNAITFKTII 418
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 108/270 (40%), Gaps = 38/270 (14%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P T ++ + SL K+ R ++ F+ + GI D + LI F + + A
Sbjct: 58 PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFS 117
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+F ++G + L+ G +++ L + + + ++NG
Sbjct: 118 VFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLC 177
Query: 177 K-----------RRAYWAAVK------------------------VYEQLISQGCIPGQV 201
K R+ +VK +Y ++I +G P
Sbjct: 178 KAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVF 237
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY ++I+ +C +G +A + EM+ K + V ++ ++ K G+I +AM L +M
Sbjct: 238 TYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
K K PN+ Y SL+D G KN LE+
Sbjct: 298 KHKNMFPNIVTYTSLID--GLCKN-HHLER 324
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M GI + Y ++ F +G+ ++ +L E + + ++ + + IL D+
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNIN---PDVYTFNILIDA 280
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ E + F +MK K + + Y SLI ++ A L K+ +E+G+ +
Sbjct: 281 LAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPN 340
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + L+ + G +E + + + K LN+ V++NG K + + +
Sbjct: 341 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRT--YNVMINGLCKAGLFGDVMDL 398
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
++ +GC+P +T+ +II A KAEK EM +G K
Sbjct: 399 KSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGLLK 444
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 106/247 (42%), Gaps = 3/247 (1%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
L F + +G D Y +LI E K L ++ E + DL ++ ++
Sbjct: 151 LHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHC 210
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ ++ ++ M ++ + +++GF A + ++ + P
Sbjct: 211 LCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPD 270
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
T+ +I+A + G +A +F EM+ K +V Y+S++ K + A+ L
Sbjct: 271 VYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCK 330
Query: 260 KMKPKGCEPNVWIYNSLMDM---HGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFR 316
KMK +G +PNV+ Y L+D GR +N +Q ++ V + R +++ + +
Sbjct: 331 KMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAG 390
Query: 317 MNGGVID 323
+ G V+D
Sbjct: 391 LFGDVMD 397
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 79/193 (40%), Gaps = 16/193 (8%)
Query: 166 CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
C +++N F A V+ ++ +G P +T ++I C G +A +
Sbjct: 97 CTLSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDK 156
Query: 226 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD------M 279
+ +GF V+Y +++ K G + RL+ K++ +P++ +Y +++ +
Sbjct: 157 VVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKL 216
Query: 280 HGRAKNL----------RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGI 329
G A +L + YTT+I + + NE ++ D I
Sbjct: 217 LGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNI 276
Query: 330 MVGVFSKLSQIEE 342
++ +K +I+E
Sbjct: 277 LIDALAKEGKIDE 289
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
I++ K + Y + +++Q G P T + +IN +C + + A VF + ++G
Sbjct: 67 ILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANILKRG 126
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------MHGRA 283
+ + ++++ G I+ A+ K+ +G + + Y +L++ A
Sbjct: 127 YHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVA 186
Query: 284 KNLRQLEK---------YTTVI 296
+ LR+LE YTT+I
Sbjct: 187 RLLRKLEGHSVKPDLVMYTTII 208
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 135/277 (48%), Gaps = 3/277 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G+V D + I+ F + G+ + A F + + + L P T +Y IL +
Sbjct: 352 FNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKM--KGVGLVPD-TVIYTILING 408
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++ LK +M E+G + D Y +L+ + A+ELFKE E+G+ D
Sbjct: 409 YCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD 468
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+ Y ++G + K L + E+M L +++GF K A +++
Sbjct: 469 FYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWY 528
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+IS+ P ++++ +IN +C +GL S+A +++ EM++KG +V ++++ Y + G
Sbjct: 529 DMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAG 588
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ A + M +G P+ YN+L++ + +N
Sbjct: 589 NLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENF 625
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 128/270 (47%), Gaps = 3/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y +M+ G+ D Y ++ A+ + G + L ++C + K L P Y L +
Sbjct: 246 YLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGL-VDCMAGK-GLKPG-LFTYNALIN 302
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K G + +M G+ + + + ++ +V AE +F E ++G++
Sbjct: 303 GLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVP 362
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
DL F +V ++ G + + L E MK L I +++NG+ + A+K+
Sbjct: 363 DLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMR 422
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ +GC+ VTY +++N CR + A+++F EM ++G ++++ Y K
Sbjct: 423 NEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKD 482
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G + A+ L M + +P+V YN+LMD
Sbjct: 483 GNMTKALSLFETMTLRSLKPDVVTYNTLMD 512
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 141/335 (42%), Gaps = 23/335 (6%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK--LDLTPSSTHMYK 64
L Y+EKMK G+V D+ Y ++ + + D + E R +D+ Y
Sbjct: 384 LAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVV-----TYN 438
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L + L + + + F++M E+G+ D +LI + + A LF+ +
Sbjct: 439 TLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLR 498
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ D+ + L+ + + G +EK E+ M + E+ S +++NGF A
Sbjct: 499 SLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEA 558
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++++++ +G P VT +II Y R G SKA M +G + Y++++
Sbjct: 559 FRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINS 618
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM---DMHGRAKNLRQL------------ 289
+ K A L+ M+ +G PN+ YN+++ HGR + +
Sbjct: 619 FVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPD 678
Query: 290 -EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
YT++I+ Y + ++E G V D
Sbjct: 679 KSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%)
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E EEKG+ DL + LV Y G+V + +V+ M L ++NG K
Sbjct: 247 LSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCK 306
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+Y A +V ++++ G P T+ ++ CR +AE+VF EM Q+G +++
Sbjct: 307 EGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLIS 366
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+SS+V ++ + G + A+ KMK G P+ IY L++ + R ++
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDV 415
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 109/232 (46%), Gaps = 8/232 (3%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ + I+ ++L K G+ + + +M+EKG+ D Y +L+ ++ V A L
Sbjct: 223 NVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLV 282
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF--- 175
KG+ L + L+ +EG E+ V++ M L + C + N
Sbjct: 283 DCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEM----LGVGLCPNAATFNPMLVE 338
Query: 176 -SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
++ W A +V+ +++ +G +P ++++SI+ + R G +A F +M+ G
Sbjct: 339 SCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPD 398
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
V Y+ ++ Y + + A+++ +M +GC +V YN+L++ R K L
Sbjct: 399 TVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKML 450
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A KVYE + G I T ++NA C+ G EM++KG +V Y+++V
Sbjct: 208 AWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVN 267
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNLRQLEKYTTVIS 297
Y + G + +A LV M KG +P ++ YN+L++ + RAK R L++ V
Sbjct: 268 AYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAK--RVLDEMLGVGL 325
Query: 298 AYNMAREFDMCV------------KFYNEFRMNGGVIDRAMAGIMVGVFSK 336
N A M V + +NE G V D +VGVFS+
Sbjct: 326 CPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSR 376
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 7/266 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH--MYKILCDSLGKSGRAFEILKF 82
Y I+ K+GD+E L K++ T H +Y + D L K G
Sbjct: 44 YGTIINGLCKMGDTESALNLL-----SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNL 98
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F +M +KGI D Y+ +I SF AE+L ++ E+ + D+ F L+ ++
Sbjct: 99 FTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVK 158
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
EG V + E+ M + + +++GF K+ A ++ + + S+ C P VT
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVT 218
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
++++IN YC+ ++F EM ++G V Y++++ + + G + A L+ M
Sbjct: 219 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G PN + S++ K LR+
Sbjct: 279 SSGVAPNYITFQSMLASLCSKKELRK 304
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 109/225 (48%), Gaps = 6/225 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L + L GR + L M E+G P Y ++I + + + A L + E
Sbjct: 13 FTTLMNGLCCEGRVLQALALVDRMVEEG--HQP--YGTIINGLCKMGDTESALNLLSKME 68
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
E + + ++ ++ ++G + M + + D I+ +++ F + +
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGI-FPDVITYSGMIDSFCRSGRW 127
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++ +I + P VT++++INA + G S+AE+++ +M ++G + Y+SM
Sbjct: 128 TDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSM 187
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ + K R+ DA R++ M K C P+V +++L++ + +AK +
Sbjct: 188 IDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRV 232
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 118/269 (43%), Gaps = 3/269 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
+++S L+ KM+ I Y I++ K G LF E + + P
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGI--FPDVI- 112
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + DS +SGR + + RDM E+ I D +++LI + +V AEE++ +
Sbjct: 113 TYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDM 172
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ + ++ + ++ + +++SM + + ++NG+ K +
Sbjct: 173 LRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRV 232
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
++++ ++ +G + VTY ++I+ +C++G A+ + M G + + SM
Sbjct: 233 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSM 292
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+A +R A ++ ++ P +
Sbjct: 293 LASLCSKKELRKAFAILEDLQKSEVCPRI 321
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ GC P VT+ +++N C G +A + M ++G Y +++ K G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNL 286
A+ L++KM+ + +V IYN+++D H A+NL
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNL 98
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 132/277 (47%), Gaps = 3/277 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G+V D + ++ F + ++ F + +K L P + +Y +L
Sbjct: 246 FGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDM--KKFGLVPDNV-IYTVLMHG 302
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++G E LK +M E+G + D Y +++ + A++LF E E+G L D
Sbjct: 303 YCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD 362
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F L+ + ++G + K L + +M + +++GF K A ++++
Sbjct: 363 FYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWD 422
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+IS+ P +TY +INAYC +G S+A +++ M +KG +V ++++ Y ++G
Sbjct: 423 GMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSG 482
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
A + +M KG P+ YN+L++ R N+
Sbjct: 483 DSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNM 519
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ +M+ GI D Y ++ A+ + G E+ + + L S Y + +
Sbjct: 140 FLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGL---KPSLFTYNAIIN 196
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K GR +M G+ D + Y +L+ A+E+F E +G++
Sbjct: 197 GLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVP 256
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
DL F L+ ++ +++ L MK L + I V+++G+ + A+K+
Sbjct: 257 DLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIR 316
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++ QGC+ + Y +I+N C+ + + A+K+F EM ++G +++++ + +
Sbjct: 317 DEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQD 376
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G + A+ L M + +P++ YN+L+D
Sbjct: 377 GNMTKALSLFGTMTQRNIKPDIVAYNTLID 406
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
++ + +C +VK E E G+ D+ + L+ Y EG++E+ E++ S
Sbjct: 122 NIMVNALCKDGKFDDVK---SFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNS 178
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
M + L S I+NG K+ Y A + ++++ G P TY +++ CR
Sbjct: 179 MADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDN 238
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+S+A+++F EM ++G +V++SS++A++ + + A+ MK G P+ IY
Sbjct: 239 FSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 298
Query: 276 LMDMHGRAKNLRQLE 290
L MHG +N LE
Sbjct: 299 L--MHGYCRNGNMLE 311
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 113/233 (48%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ + I+ ++L K G+ ++ F +M+ GI D Y +LI ++ ++ A E+
Sbjct: 117 NVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIM 176
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+KG+ L + ++ ++G + ++ M N L+ ++ +R
Sbjct: 177 NSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRR 236
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A +++ +++ QG +P V+++S+I + R +A F +M++ G V Y
Sbjct: 237 DNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY 296
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ ++ Y + G + +A+++ +M +GC +V YN++++ + K L +K
Sbjct: 297 TVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADK 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 107/260 (41%), Gaps = 3/260 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G + D + ++ + G+ K +LF R ++ P Y L D
Sbjct: 351 FDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR--NIKPDIV-AYNTLIDG 407
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G + + + M + I + Y LI ++ S+ V A L+ EKG+
Sbjct: 408 FCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPT 467
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L ++ Y G K E + M + ++NGF + A
Sbjct: 468 LVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWIN 527
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G +P +TY ++N +CR G +AE V +M +KG + Y++++ +
Sbjct: 528 KMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQD 587
Query: 250 RIRDAMRLVAKMKPKGCEPN 269
+ +A R +M +G P+
Sbjct: 588 NLNEAFRFHDEMLQRGFAPD 607
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 5/231 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L + M I D Y +++ F K+G+ EK + L+ SRK + P+
Sbjct: 378 NMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK--IFPNHI- 434
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL ++ G E + + M EKGI ++I + + A+E
Sbjct: 435 TYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM 494
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRA 180
KG+ D + L+ ++ E ++K + M+ L + D I+ V++NGF ++
Sbjct: 495 IAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGL-LPDIITYNVVMNGFCRQGR 553
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A V ++I +G P + TY ++IN + ++A + EM Q+GF
Sbjct: 554 MQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGF 604
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 91/206 (44%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
FR ++ KG L + SL+ I V++A E+ +E G+ ++ +V +
Sbjct: 71 FRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCK 130
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
+G + + M+ + ++ + + A ++ + +G P T
Sbjct: 131 DGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFT 190
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y +IIN C+ G Y++A+ + IEM G Y++++ + +A + +M
Sbjct: 191 YNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEML 250
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+G P++ ++SL+ + R ++L Q
Sbjct: 251 RQGVVPDLVSFSSLIAVFSRNRHLDQ 276
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 137/297 (46%), Gaps = 16/297 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D+ G+ E + + E + + YA LI ++ ++ AE +F E +
Sbjct: 165 YNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEAVFVEMK 224
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ V+ + ++ G K E+ MK S +++N + K +
Sbjct: 225 NYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSF 284
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+KV+ +++S C P TY +++NA+ R GL KAE+VF +MQ+ G + V +Y++++
Sbjct: 285 MALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALM 344
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------ 290
Y + G A + + M+ GCEP+ YN L+D +GRA L E
Sbjct: 345 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGIT 404
Query: 291 ----KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ ++SA++ C N+ +G +D + M+ ++ +L Q ++
Sbjct: 405 PTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKM 461
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 141/301 (46%), Gaps = 12/301 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y ++ A + + Y +++A+ G EK A+F+E ++ L PSS +Y +
Sbjct: 185 YLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEAVFVEMKNYGL---PSSAVVYNSYING 241
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G + + F MK G Y LI + + +A ++F E +
Sbjct: 242 LMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPN 301
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + LV + EG+ EK EV E M+ A L ++ +S+ + A +++
Sbjct: 302 ICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFS 361
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ GC P + +Y +++AY R G + AE VF +M++ G + ++ +++ + KTG
Sbjct: 362 LMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTG 421
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV---------ISAYN 300
+ ++ +M G + + ++ NS+++++GR ++E+ TV IS YN
Sbjct: 422 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 481
Query: 301 M 301
+
Sbjct: 482 I 482
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 129/281 (45%), Gaps = 3/281 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MK+ G+ + Y + K G+ K +FL K D ST Y +L +
Sbjct: 220 FVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLR---MKRDGCKPSTETYTMLINL 276
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK G++F LK F +M + Y +L+ +FA + AEE+F++ +E G+ D
Sbjct: 277 YGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPD 336
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y G E+ M++ ++V+ + + A V+E
Sbjct: 337 VYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFE 396
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G P ++ +++A+ + G SK E + +M + G +SM+ +YG+ G
Sbjct: 397 DMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLG 456
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ ++ M+ CE ++ YN L++ +G+A + ++E
Sbjct: 457 QFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 497
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%)
Query: 93 EDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
+D Y LI +F K AE + + E + + + + L+ Y G++EK V
Sbjct: 160 QDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEAV 219
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
MKN L S + +NG K A +++ ++ GC P TY +IN Y +
Sbjct: 220 FVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGK 279
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
G A KVF EM + Y+++V + + G A + +M+ G EP+V+
Sbjct: 280 DGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYS 339
Query: 273 YNSLMDMHGRA 283
YN+LM+ + RA
Sbjct: 340 YNALMEAYSRA 350
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 128/263 (48%), Gaps = 14/263 (5%)
Query: 19 VLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGR--- 75
++ G Y Q ++ F+ + D L CE + Y +L D+L K G
Sbjct: 129 LVKGGLYDQAIQVFFDMRDGTN--GLEHGCEPNVI--------TYNVLIDALCKEGLLDI 178
Query: 76 AFEILKFFRDMK-EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
++L++ RD ++ + + + Y +LI + + AEEL E G+ D +
Sbjct: 179 GMKVLQYMRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYT 238
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ Y + G+ E + MK +++ +++ + + Y A ++++ +
Sbjct: 239 ALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHS 298
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G P QVTY S++ AY + GL ++ VF M++ G++ V+ YSS++ YGK G +A
Sbjct: 299 GLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEA 358
Query: 255 MRLVAKMKPKGCEPNVWIYNSLM 277
R++ M+ GC+PN+ Y++++
Sbjct: 359 ARMLDMMRRAGCQPNLITYSAIL 381
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 111/243 (45%), Gaps = 21/243 (8%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + Y L ++ GK+ E L F MKE +P+ + + A I + V L
Sbjct: 79 ADQYTYTALVNAYGKAKMFEEALAVFSHMKES---NEPNCQPNTVTCNALI-DALVKGGL 134
Query: 118 FKEA-------------EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS 164
+ +A E G ++ + L+ +EG+++ ++V++ M++ + S
Sbjct: 135 YDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQS 194
Query: 165 ----DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
++N K Y A ++ + ++ G P +TY ++I+AY + GL+ AE
Sbjct: 195 VQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAE 254
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
F M+ V+AY++M+ YG+ G + A + M+ G PN Y SLM+ +
Sbjct: 255 NTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAY 314
Query: 281 GRA 283
G+A
Sbjct: 315 GKA 317
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 80/165 (48%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D+ GK+G F+ MK + D Y ++I ++ + AEE+FK +
Sbjct: 237 YTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQ 296
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ + +L L+ Y + G+ E++ V M+ + + I +++ + K Y
Sbjct: 297 HSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYL 356
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
A ++ + + GC P +TY++I+++ C+ + +A+ + +Q
Sbjct: 357 EAARMLDMMRRAGCQPNLITYSAILSSCCKSNCWVEAQVLLRRLQ 401
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 96/206 (46%), Gaps = 1/206 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P+S Y L ++ GK G + + M E G+ D Y +LI ++ + AE
Sbjct: 197 PNSA-TYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAEN 255
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
FK + + D+ + ++ Y EG+ +K E+ + M+++ L + ++ +
Sbjct: 256 TFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYG 315
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K + V+ + G + Y+S+I+AY + G Y +A ++ M++ G ++
Sbjct: 316 KAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAGCQPNLI 375
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMK 262
YS++++ K+ +A L+ +++
Sbjct: 376 TYSAILSSCCKSNCWVEAQVLLRRLQ 401
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC---VVAYSS 240
A ++++++ + C Q TY +++NAY + ++ +A VF M++ C V ++
Sbjct: 65 ATLLFQEMLLEKCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNA 124
Query: 241 MVAMYGKTGRIRDAMRLVAKMKP------KGCEPNVWIYNSLMD 278
++ K G A+++ M+ GCEPNV YN L+D
Sbjct: 125 LIDALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLID 168
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G+V D + +M F + ++ F + +K L P + +Y +L
Sbjct: 94 FGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDM--KKFGLVPDNV-IYTVLMHG 150
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++G E LK +M E+G + D Y +++ + A++LF E E+G L D
Sbjct: 151 YCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD 210
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F L+ + ++G + K L + +M + +++GF K A ++++
Sbjct: 211 FYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWD 270
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+IS+ P +TY +INAYC +G S+A +++ M +KG +V ++++ Y ++G
Sbjct: 271 GMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSG 330
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A + +M KG P+ YN+L++
Sbjct: 331 DSSKADEFLGRMIAKGVAPDHISYNTLIN 359
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 107/221 (48%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S Y + + L K GR +M G+ D + Y +L+ A+E+
Sbjct: 34 PSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEI 93
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F E +G++ DL F L+ ++ +++ L MK L + I V+++G+ +
Sbjct: 94 FGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCR 153
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A+K+ ++++ QGC+ + Y +I+N C+ + + A+K+F EM ++G
Sbjct: 154 NGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYT 213
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+++++ + + G + A+ L M + +P++ YN+L+D
Sbjct: 214 FTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 254
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 123/256 (48%), Gaps = 3/256 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y I+ K G + + +E + + L+P +T +L +S + + E + F
Sbjct: 39 YNAIINGLCKKGRYARAKGILIEMLN--IGLSPDTTTYNTLLVESCRRDNFS-EAKEIFG 95
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M +G++ D ++SL+ F+ + A F++ ++ G++ D ++ L+ Y G
Sbjct: 96 EMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNG 155
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ + L++ + M + I+NG K + A K++++++ +G +P T+
Sbjct: 156 NMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFT 215
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++I+ +C+ G +KA +F M Q+ +VAY++++ + K G + A L M +
Sbjct: 216 TLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISR 275
Query: 265 GCEPNVWIYNSLMDMH 280
PN Y L++ +
Sbjct: 276 KIFPNHITYGILINAY 291
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
L+ Y EG++E+ E++ SM + L S I+NG K+ Y A + ++++ G
Sbjct: 7 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 66
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
P TY +++ CR +S+A+++F EM ++G +V++SS++A++ + + A+
Sbjct: 67 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQAL 126
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
MK G P+ IY L MHG +N LE
Sbjct: 127 VYFRDMKKFGLVPDNVIYTVL--MHGYCRNGNMLE 159
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 16/147 (10%)
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY ++I AYCR GL +A ++ M KG + Y++++ K GR A ++ +
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKN-----------LRQ-----LEKYTTVISAYNMARE 304
M G P+ YN+L+ R N LRQ L ++++++ ++ R
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMV 331
D + ++ + + G V D + +++
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLM 148
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 135/273 (49%), Gaps = 3/273 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E MK+ G D Y +M F KIGD A L E ++L P+ Y L D+
Sbjct: 41 EGMKTEGPAPDIVTYNTLMNGFCKIGDL--FTAKKLMGEISLVNLEPNVI-TYTTLIDAY 97
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
KS + L + +M K ++ D Y ++ +V+ A+ +F+E EE G++ +
Sbjct: 98 CKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNR 157
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +EG V + + M + + +++G K A +++
Sbjct: 158 FSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQV 217
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L+ + +P VTY+++I+ +C++G +K E + EM++K V+ YSS+V Y K G
Sbjct: 218 LLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGL 277
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ +AM ++ KM + PNV++Y +L+D + +A
Sbjct: 278 LNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 159/356 (44%), Gaps = 29/356 (8%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ M S G++ D Y +M+ F+K G D+ +A E +S D+ Y +L
Sbjct: 355 FKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTE-KSSGFDVVA-----YNVL 408
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L K G+ +E F M++ G+ D + + ++I ++ + A +L E + G+
Sbjct: 409 INGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGL 467
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ LV G +EKT++++ M + + +++ SK R +
Sbjct: 468 KPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILH 527
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++QL+ G TY ++I+ +CR+G+ +A VF +M KG ++ Y++++ Y
Sbjct: 528 XHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYC 587
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LE 290
+ ++ A + ++M +G PNV YN L+ A+ +++
Sbjct: 588 ISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNAT 647
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS---KLSQIEEL 343
Y ++S + CVK Y E G V +++ F+ K+SQ +EL
Sbjct: 648 TYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKEL 703
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 5/277 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIM-EAFYKIGDSEKVAALFLECESRKLDLTPSST 60
N + L +MKS G+ +S C I+ + G+ EK L + TP++
Sbjct: 451 NLGNALKLLNEMKSYGLKPNS-ITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTT- 508
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+K + D+ KS RA IL + G+ D S Y +LI +F + ++ A +FK+
Sbjct: 509 --HKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKD 566
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
KG+L D+ + L+ Y ++K V M ++ + +++ G S R
Sbjct: 567 MMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARL 626
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A + Q+ +G +P TY +++ + +IG + K++ EM KGF Y+
Sbjct: 627 IKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNV 686
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+++ + K ++ A L+ +M+ +G PN Y+ L+
Sbjct: 687 LISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 154/348 (44%), Gaps = 18/348 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ G+V + Y ++++ +K G+ + L R + +Y L D
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF---DVVVYTALMDG 201
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G A F+ + E+ ++ + Y++LI + +V E L +E EEK + +
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ V+ +V Y ++G++ + ++V+ M + + + +++G+ K A+ +++
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ S+G S +N R G +A+++F +M +G V Y+SM+ + K G
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---------MHGRAKNLRQL------EKYTT 294
+ DA + +M K +V YN L++ +RQL + T
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNT 441
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+I+AY +K NE + G + I+V +IE+
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 35/220 (15%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S + +L D ++G ++ MK +G D Y +L+ F I ++ A++L
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E S+ N E N+ +++ + K
Sbjct: 76 GEI---------------------------------SLVNLEPNV--ITYTTLIDAYCKS 100
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A+ +Y+++ + +P VTY I+N C+ G +A+ VF EM++ G +Y
Sbjct: 101 QCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSY 160
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++++ K G + +A L +M +G +V +Y +LMD
Sbjct: 161 ATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMD 200
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V+++G+ + AV++ E + ++G P VTY +++N +C+IG A+K+ E+
Sbjct: 22 VLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLV 81
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKN- 285
+ V+ Y++++ Y K+ + DA+ + +M K P+V Y +M+ G+ +
Sbjct: 82 NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141
Query: 286 ---LRQLEKYTTVISAYNMAREFDMCVKFYN---EFRMNGGVIDRAMAGIMVGVFSKL 337
R++E+ V + ++ A D K N F + G ++ R + G V V++ L
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI-GFDVVVYTAL 198
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 136/284 (47%), Gaps = 3/284 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++M+ G+ D + ++ + G E +F E + R ++ + L
Sbjct: 291 LDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIE---QDIFTFNTL 347
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D++ K G+ M+ K I + Y+++I + + + A L+ + +E G+
Sbjct: 348 IDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGV 407
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ +Y + G + L + M+ L +++ + K+ Y A
Sbjct: 408 RPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAC 467
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++ +G +P +TY+++I++Y + G++ VF E ++ G VV YSS++
Sbjct: 468 LFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCC 527
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
K G + DA+ L+ +M G +PN+ YNSL+D +GR +LE
Sbjct: 528 KCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLE 571
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 125/264 (47%), Gaps = 40/264 (15%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFR--------------------------------- 84
++ + Y + + G+SGR E LK F+
Sbjct: 233 NNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALD 292
Query: 85 ---DMKEKGILEDPSVYASLI--CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+M+++G+ D + SLI CS + E ++ +F E + +G+ +D+ F L+
Sbjct: 293 IFDEMQKEGVEPDRITFNSLIAVCSRGGLWE--DSQRVFAEMQRRGIEQDIFTFNTLIDA 350
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G +E ++ +M+ ++ + +++G+ K + A+ +Y + G P
Sbjct: 351 VCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPD 410
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+V+Y ++I+ Y ++G + A +M++ G VV Y++++ YGK G+ +DA L
Sbjct: 411 RVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFD 470
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRA 283
KMK +G PNV Y++L+D + +A
Sbjct: 471 KMKGEGLVPNVLTYSALIDSYSKA 494
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 142/303 (46%), Gaps = 26/303 (8%)
Query: 43 ALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGIL--EDPSVYAS 100
AL LE S +L + L LG G L+ + M ++ L E + +
Sbjct: 150 ALLLEKWSHQL----VGLEDFPYLLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASI 205
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
+I + + +V++A ++F A++ G ++ + +V Y G + L+V ++MK A
Sbjct: 206 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 265
Query: 161 LNISDCISCVIVNGFSKRRA-YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
+ I++ K A+ +++++ +G P ++T+ S+I R GL+ +
Sbjct: 266 CKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDS 325
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
++VF EMQ++G ++ + +++++ K G++ A ++ M+ K PNV Y++++D
Sbjct: 326 QRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDG 385
Query: 280 HGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
+G+ F+ + Y++ + +G DR ++ +++KL +
Sbjct: 386 YGKLGC-------------------FEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGR 426
Query: 340 IEE 342
++
Sbjct: 427 FDD 429
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 125/292 (42%), Gaps = 29/292 (9%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ I + Y +++ + K+G E+ +L+ + ++ + P Y L D K
Sbjct: 367 MRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDM--KESGVRPDRVS-YNTLIDIYAK 423
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR + L +DM+ G+ D Y +LI ++ + K A LF + + +G++ ++
Sbjct: 424 LGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLT 483
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELN---------ISDCISCVIVNGFSKRRAYWA 183
+ L+ Y + GM + V K A L I C C +V
Sbjct: 484 YSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVED--------- 534
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ-------QKGFDKCVV 236
AV + +++ G P VTY S+I+AY R G K E V M ++ +
Sbjct: 535 AVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVRK 594
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
S TG + A+ + +M+ G +PNV ++++++ R +L++
Sbjct: 595 PPPSQQNASDHTG-VLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQE 645
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 11/273 (4%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ G+ D Y +++A+ K G + A LF + + L P+ Y L DS K
Sbjct: 437 MERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGE--GLVPN-VLTYSALIDSYSK 493
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G ++ F + K G+ D +Y+SLI S V+ A L +E + G+ ++
Sbjct: 494 AGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVT 553
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI------VNGFSKRRAYWAAVK 186
+ L+ Y G +K V +M N+ I + V+ S AAV
Sbjct: 554 YNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVS 613
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+ ++ G P VT+++I+NA R +A V +E Q + FD V + + M
Sbjct: 614 VFHEMQQFGLKPNVVTFSAILNACSRCASLQEAS-VLLE-QMRFFDGWVYGIAHGLLMGL 671
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ +A RL ++ YN+L D+
Sbjct: 672 REQVWVEAQRLFDEISRMDYATGAAFYNALTDV 704
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 7/303 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++KM G + Y ++ K+G++ AA+ L + + P +Y +
Sbjct: 157 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN--AAIRLLRSMEQGNCQPDVV-VYTSI 213
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + E F M +GI D Y SLI S ++ E K L + +
Sbjct: 214 IDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKI 273
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAA 184
+ D+ +F +V +EG + + +VV+ M + E N+ +++G + A
Sbjct: 274 MPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNV--VTYNALMDGHCLQSEMDEA 331
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
VKV++ ++ G P ++Y ++IN YC+I KA +F EM QK V Y++++
Sbjct: 332 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHG 391
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
GR++DA+ L +M G P++ Y L+D + +L + I NM +
Sbjct: 392 LCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPD 451
Query: 305 FDM 307
+
Sbjct: 452 IQI 454
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 6/227 (2%)
Query: 57 PSSTHMYKILCDS---LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
P + IL +S L + G AF +L + + G+ D + + +LI ++
Sbjct: 99 PPDVYTLNILINSFCHLNRPGFAFSVLA---KILKLGLQPDTATFTTLIRGLCVEGKIGD 155
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A LF + +G ++ + L+ + G + ++ SM+ + I++
Sbjct: 156 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIID 215
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
K R A ++ +++ QG P TY S+I++ C + + + +M
Sbjct: 216 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 275
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
VV +S++V K G+I +A +V M +G EPNV YN+LMD H
Sbjct: 276 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 322
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 101/217 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K R + F +M +K ++ + Y +L+ + ++ A LF E
Sbjct: 350 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMV 409
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G + DL + L+ ++ +++ + ++++++ + ++ I ++++G +
Sbjct: 410 AHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELE 469
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AA ++ L S+G P TY +IN CR GL +A K+F+EM G Y+++
Sbjct: 470 AARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTIT 529
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ A++L+ +M +G +V L++M
Sbjct: 530 QGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM 566
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 99/236 (41%), Gaps = 5/236 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCD 68
++ M G + Y ++ + KI +K LF E C+ +L P++ Y L
Sbjct: 335 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK---ELIPNTV-TYNTLMH 390
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L GR + + F +M G + D + Y L+ + + A L K E M
Sbjct: 391 GLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP 450
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D++++ ++ G +E ++ ++ + L + +++NG +R A K++
Sbjct: 451 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLF 510
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ GC P TY +I + +A ++ EM +GF V + +V M
Sbjct: 511 MEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM 566
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ +K + Y + Q+ S G P T +IN++C + A V ++ + G
Sbjct: 73 LLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLG 132
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+++++ G+I DA+ L KM +G +PNV Y +L++
Sbjct: 133 LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLIN 180
>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
Length = 492
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 141/297 (47%), Gaps = 3/297 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S L M++AG+ Y +++ A + G + + AL LE R+L L P + H Y
Sbjct: 69 SSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEM--RRLGLRPDAAH-YN 125
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L + L + + M + G+ + Y L+ ++A ++ + + E + +
Sbjct: 126 ALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRR 185
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ D + LV +Y + GM +K +++ M+ + + I +++ F K A
Sbjct: 186 GIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADA 245
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
KV++++ ++G P T+ S+I +CR+G +A + F MQ++G + ++++
Sbjct: 246 RKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISR 305
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
G+ G+ + +L M+ +G + + +Y L+D++G+ + R + A N+
Sbjct: 306 LGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENL 362
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 126/273 (46%), Gaps = 3/273 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK GI LD+ Y ++ + G +K L +E + ++L +Y L D+ G
Sbjct: 181 EMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVEL---DVKIYNGLIDTFG 237
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ + K F M +G+ D + + SLI + K A F +E+GM D +
Sbjct: 238 KYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPK 297
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+F+ ++ E+G ++ ++ M+N L S + V+V+ + + + A L
Sbjct: 298 IFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAAL 357
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
++ + + NAY + GL + V M+ +G + +V + ++ +G GR
Sbjct: 358 KAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRH 417
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+A+ ++ +K G P+V Y +LM RAK
Sbjct: 418 LEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAK 450
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 122/260 (46%), Gaps = 7/260 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--CESRKLDLTPSSTHMYKILCDS 69
+M+ G+ LD Y +++ F K G +F + E K D+T ++ + + C
Sbjct: 216 EMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNS-LIRWHC-R 273
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+G + RA L+FF M+E+G+ DP ++ ++I + ++LF +G+
Sbjct: 274 VGNTKRA---LRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKES 330
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V+ LV +Y + G + V ++K L +S I CV+ N ++++ V V +
Sbjct: 331 GAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQ 390
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ ++G P V +INA+ G + +A V ++ G VV Y++++ + +
Sbjct: 391 LMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAK 450
Query: 250 RIRDAMRLVAKMKPKGCEPN 269
+ + +M+ GC P+
Sbjct: 451 KFEKVSEVYKEMEGAGCTPD 470
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 155/322 (48%), Gaps = 22/322 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M + G+ Y ++ ++ + G E +L L +K +TPS Y + +S
Sbjct: 165 FEEMPTHGVPRSVFSYTALINSYGRHGQYE--VSLELLERMKKEKVTPS-ILTYNTVINS 221
Query: 70 LGKSGRAFE-ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ G +E +L F +M+ +GI D Y +L+ + A+ AE +F+ E GM+
Sbjct: 222 CARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVP 281
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKV 187
D+ + LV + + +EK E+++ M+++ N+ D S V++ ++ + A+ V
Sbjct: 282 DITTYRNLVETFGKLNKLEKVSELLKEMESSG-NLPDISSYNVLLEAYASKGDIRHAMGV 340
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ Q+ C+P VTY+ ++N Y G Y ++F+EM+ + V Y+ ++ ++G+
Sbjct: 341 FRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGE 400
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM------DMHGRAKN--LRQLEK-------- 291
G ++ + L M + EPN+ Y L+ +H AK L EK
Sbjct: 401 GGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKA 460
Query: 292 YTTVISAYNMAREFDMCVKFYN 313
YT VI AY A ++ + +N
Sbjct: 461 YTGVIEAYGQAASYEEALVMFN 482
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 145/333 (43%), Gaps = 25/333 (7%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD---LTPS 58
N + L + +M+ GI D Y ++ A G ++ +F R ++ + P
Sbjct: 228 NWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVF-----RTMNEGGMVPD 282
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
T Y+ L ++ GK + ++ + ++M+ G L D S Y L+ ++AS +++ A +F
Sbjct: 283 IT-TYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVF 341
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
++ +E + + + L+ +Y G + E+ MK + V++ F +
Sbjct: 342 RQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEG 401
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ V ++ ++ + P TY +I A + GL+ A+K+ + M +KG AY
Sbjct: 402 GYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAY 461
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH----------------GR 282
+ ++ YG+ +A+ + M G +P V YNSL++M G
Sbjct: 462 TGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGE 521
Query: 283 AKNLRQLEKYTTVISAYNMAREFDMCVKFYNEF 315
+ R + + VI Y +F+ +K Y E
Sbjct: 522 SGVARDRDSFNGVIEGYRQGGQFEEAIKTYVEL 554
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 116/250 (46%), Gaps = 3/250 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK + D G Y ++E F + G ++V LF + ++ + Y+ L + G
Sbjct: 378 EMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVE---PNMGTYEGLIYACG 434
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G + K M EKGI+ Y +I ++ A + A +F E G +E
Sbjct: 435 KGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVE 494
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ M+ G+ +++ ++ M + + ++ G+ + + A+K Y +L
Sbjct: 495 TYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVEL 554
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
P + T+ ++++ YC GL ++E+ F E++ G V+ Y M+A+Y ++ R
Sbjct: 555 EKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRW 614
Query: 252 RDAMRLVAKM 261
DA ++ +M
Sbjct: 615 DDAYEVLDEM 624
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 123/269 (45%), Gaps = 6/269 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ + + F + GD ++ LF + R++ P+ H+Y I+ LG+ G + + F
Sbjct: 109 FALVFKEFAQRGDWQRSLRLF-KYMQRQIWCKPNE-HIYTIIISLLGREGLLEKSTEIFE 166
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M G+ Y +LI S+ + +V+ EL + +++ + + + ++ G
Sbjct: 167 EMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGG 226
Query: 145 M-VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
+ E L + M++ + ++N + R A V+ + G +P TY
Sbjct: 227 LNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTY 286
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+++ + ++ K ++ EM+ G + +Y+ ++ Y G IR AM + +M+
Sbjct: 287 RNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQE 346
Query: 264 KGCEPNVWIYNSLMDM---HGRAKNLRQL 289
C PN Y+ L+++ HGR ++R+L
Sbjct: 347 ARCVPNAVTYSMLLNLYGGHGRYDDVREL 375
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 124/270 (45%), Gaps = 3/270 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+S+G + D Y ++EA+ GD +F + + + P++ Y +L +
Sbjct: 307 KEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARC--VPNAV-TYSMLLNLY 363
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G GR ++ + F +MK D Y LI F K LF + E+ + ++
Sbjct: 364 GGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNM 423
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + G+ E +++ M + S ++ + + +Y A+ ++
Sbjct: 424 GTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNT 483
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P TY S+IN + R GLY ++E + +M + G + +++ ++ Y + G+
Sbjct: 484 MNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQ 543
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+A++ +++ +P+ + +++ ++
Sbjct: 544 FEEAIKTYVELEKARFQPDERTFEAVLSVY 573
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%), Gaps = 30/236 (12%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+E + + G + + LE+ ++ +L+++D ++ F++R + +++++
Sbjct: 76 DVETLINKLSSLPPRGSIARCLEIFKN----KLSLNDF--ALVFKEFAQRGDWQRSLRLF 129
Query: 189 EQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ + Q C P + Y II+ R GL K+ ++F EM G + V +Y++++ YG+
Sbjct: 130 KYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGR 189
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-----------KNLRQ------LE 290
G+ ++ L+ +MK + P++ YN++++ R +R +
Sbjct: 190 HGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDII 249
Query: 291 KYTTVISA---YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
Y T+++A + E +M + NE G V D +V F KL+++E++
Sbjct: 250 TYNTLLNACANRGLGDEAEMVFRTMNE---GGMVPDITTYRNLVETFGKLNKLEKV 302
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 48/272 (17%), Positives = 114/272 (41%), Gaps = 7/272 (2%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M GIV + Y ++EA+ + E+ +F ++ P+ Y L + +
Sbjct: 449 MDEKGIVPSTKAYTGVIEAYGQAASYEEALVMF--NTMNEMGSKPT-VETYNSLINMFAR 505
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G E M E G+ D + +I + + + A + + E E+ D
Sbjct: 506 GGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERT 565
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F ++ +Y G+V+++ E ++ + + S C+++ +++ + A +V ++++
Sbjct: 566 FEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMV 625
Query: 193 SQGCIP-GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ QV + Y + E VF ++ +G + Y++++ G+
Sbjct: 626 TNKVSNIHQVVGKMMKGDYDDYSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQK 685
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSL---MDMH 280
A R++++ +G P ++ + L +D+H
Sbjct: 686 ERAARVLSEAIKRGLFPELFRKSKLVWSVDVH 717
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MKS I D Y ++ K+ K L +E E +D S + L D+
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD---PSVETFNTLIDA 448
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G +G+ + DM++KGI D + S++ +F ++ A + + K + +
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 508
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+V+ ++ YIE G E+ +VE MKN+ ++ S +++ G + A ++
Sbjct: 509 AQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 568
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L +QG P V+Y +II+A C G KA ++ EM + G + Y ++V+ G
Sbjct: 569 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 628
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
R+ D L +M K EP+ IY ++D + R +N
Sbjct: 629 RVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 664
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 136/317 (42%), Gaps = 38/317 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++M G+V + Y +++ K GD E A F + D + Y +L
Sbjct: 214 LKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE---AGFRLRDQMLHDGPKPNIVTYNVL 270
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L ++GR E +M + D Y+ L E + LF E+ +KG+
Sbjct: 271 LSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGV 330
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ L+ ++G V K +V+E + + L + I ++NG+ + R A
Sbjct: 331 MLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFC 390
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++EQ+ S+ P +TY ++IN C++ + +KAE + +EM++ G D V +++++ YG
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450
Query: 247 KTGRIRDAMRLVAKMKPKGCE-----------------------------------PNVW 271
G++ +++ M+ KG + PN
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510
Query: 272 IYNSLMDMHGRAKNLRQ 288
+YNS++D + + + Q
Sbjct: 511 VYNSIIDAYIESGDTEQ 527
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 150/344 (43%), Gaps = 17/344 (4%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
+AG D+ + ++++A GD + VA + R P Y ++ L +SG
Sbjct: 150 AAGARPDTFAWNKVVQACVAAGDLD-VALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSG 208
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+ + LK F +M + G++ + Y ++I +++ L + G ++ +
Sbjct: 209 KGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYN 268
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ G +++T +++ M + + ++ +G ++ + ++ + + +
Sbjct: 269 VLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKK 328
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G + G T + ++N C+ G +KAE+V + G V Y++++ Y + +R A
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388
Query: 255 MRLVAKMKPKGCEPNVWIYNSL------MDMHGRAKNL----------RQLEKYTTVISA 298
+ +MK + P+ YN+L ++M +A++L +E + T+I A
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 448
Query: 299 YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y A + + C ++ + G D G +V F K +I E
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 492
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 135/325 (41%), Gaps = 19/325 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M S + D Y + + + G+S + +LF E + + L + IL + L
Sbjct: 288 DEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML---GAYTCSILLNGL 344
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G+ + + + G++ +Y +LI + + +++ A +F++ + + + D
Sbjct: 345 CKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDH 404
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + MV K ++V M+ + ++ S +++ + V
Sbjct: 405 ITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD 464
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G +++ S++ A+C+ G +A + +M K Y+S++ Y ++G
Sbjct: 465 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 524
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
A LV KMK G ++ YN L+ R+ + + E+ Y T
Sbjct: 525 TEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 584
Query: 295 VISAYNMAREFDMCVKFYNEFRMNG 319
+ISA + D ++ E G
Sbjct: 585 IISACCNKGDTDKALELLQEMNKYG 609
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 93/219 (42%), Gaps = 3/219 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ GI D + +++AF K G + A+ + + D+ P++ +Y + D+ +
Sbjct: 465 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK--DVAPNA-QVYNSIIDAYIE 521
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
SG + MK G+ Y L+ +++ AEEL +G+ D+
Sbjct: 522 SGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVS 581
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ +G +K LE+++ M + + +V+ + +Y+Q++
Sbjct: 582 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQML 641
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ P Y +++AY R SK + EM +KG
Sbjct: 642 HKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 3/275 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ G+ D+ Y ++ F K+G+ LF E +K+ P Y + + K
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKI--VPDIV-TYTSVIHGICK 394
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
SG+ E + F +M KG+ D Y +LI + E+K A + + +KG+ ++
Sbjct: 395 SGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVT 454
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L + G ++ E++ M L + IVNG K VK+ E++
Sbjct: 455 YTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMD 514
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P +TY ++++AYC++G +KA ++ M K +V ++ ++ + +G +
Sbjct: 515 LAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLE 574
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
D RL+ M KG PN +NSLM + N+R
Sbjct: 575 DGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMR 609
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 115/247 (46%), Gaps = 3/247 (1%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
+IG+ +KV L E + + L ++Y + L K+G E + R M++ G+
Sbjct: 289 RIGELDKVLKLVDELKGKGLK---PDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D VY ++I F + V A +LF E K ++ D+ + ++ + G + + E+
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMF 405
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M L + +++G+ K A V+ Q++ +G P VTY ++ + C+
Sbjct: 406 NEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G A ++ EM +KG V Y+++V K G I ++L+ +M G P+ Y
Sbjct: 466 GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITY 525
Query: 274 NSLMDMH 280
+LMD +
Sbjct: 526 TTLMDAY 532
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 144/340 (42%), Gaps = 19/340 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M+ IV D Y ++ K G + +F E + L+ P Y L D
Sbjct: 370 FDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLE--PDEV-TYTALIDG 426
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+G E M +KG+ + Y +L E+ VA EL E KG+ +
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPN 486
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + +V + G +E+T++++E M A +++ + K A ++
Sbjct: 487 VYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLR 546
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++++ P VT+ ++N +C G+ E++ M +KG ++S++ Y
Sbjct: 547 IMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKN 606
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ--------LEK--------YT 293
+R + M +G P+ YN L+ H +A+N+++ +EK Y
Sbjct: 607 NMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYD 666
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
+I + ++F K + E R +G V ++ + I V V
Sbjct: 667 ALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDV 706
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 110/222 (49%), Gaps = 2/222 (0%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+ L + G+ E M ++G D Y ++ + I E+ +L E +
Sbjct: 246 NIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKG 305
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ D ++ ++L+ + G V + +++ M+ + + + +++GF K A
Sbjct: 306 KGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSA 365
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K+++++ + +P VTY S+I+ C+ G +A ++F EM KG + V Y++++
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALID 425
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
Y K G +++A + +M KG PNV Y +L D G KN
Sbjct: 426 GYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALAD--GLCKN 465
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 103/209 (49%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+K F + E G+ + ++ + +V+ A L + ++G D+ + +V
Sbjct: 227 VKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSG 286
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
Y G ++K L++V+ +K L + I I+ K A ++ + G P
Sbjct: 287 YCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPD 346
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
V Y ++I+ +C++G S A K+F EM++K +V Y+S++ K+G++ +A +
Sbjct: 347 NVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFN 406
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+M KG EP+ Y +L+D + +A +++
Sbjct: 407 EMLVKGLEPDEVTYTALIDGYCKAGEMKE 435
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 119/276 (43%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G+ + Y + + K G+ + VA L SRK L P+ + Y + +
Sbjct: 440 HNQMVQKGLTPNVVTYTALADGLCKNGEID-VANELLHEMSRK-GLQPN-VYTYNTIVNG 496
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G + +K +M G D Y +L+ ++ + E+ A EL + K +
Sbjct: 497 LCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPT 556
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L F L+ + GM+E ++E M + + ++ + + A ++Y+
Sbjct: 557 LVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYK 616
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ +G +P TY +I +C+ +A + EM +KG+ Y +++ + K
Sbjct: 617 AMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRK 676
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+ +A +L +M+ G IY+ +D++ N
Sbjct: 677 KFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGN 712
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AVKV+E+ G V+ +++ C++G +A + ++M +G VV+Y +V+
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQLEK--------- 291
Y + G + ++LV ++K KG +P+ +IYN+++ + +G QL +
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
YTTVIS + K ++E R V D
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPD 381
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 16/169 (9%)
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+ +G P V+Y +++ YCRIG K K+ E++ KG Y++++ + K G
Sbjct: 267 QMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNG 326
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNS----------------LMDMHGRAKNLRQLEKYT 293
+ +A +L+ M+ G P+ +Y + L D R K + + YT
Sbjct: 327 EVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYT 386
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+VI + + + +NE + G D ++ + K +++E
Sbjct: 387 SVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKE 435
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 137/281 (48%), Gaps = 6/281 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M S GI L+ +C I+ + G++E F + ++ +L P +Y + +
Sbjct: 76 EEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAE--NLVPGGI-VYNSIVQAY 132
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G + M+E+G + +Y +++ FA I + + F + G+
Sbjct: 133 CQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTA 192
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V ++ + G + K L+++E M ++ + I +I++G+++ + AA KV+E
Sbjct: 193 ATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWED 252
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++S G P V Y +++A+C+ G KA V ++ + Y+S++ Y K G
Sbjct: 253 MVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGN 312
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
I+ A+ + ++K G P V YNSL+ +A RQ+E
Sbjct: 313 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKA---RQMEN 350
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 142/335 (42%), Gaps = 23/335 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M SAG+ D Y ++ AF K G +K + E+ +L T + Y + D
Sbjct: 250 WEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIET---YTSILDG 306
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G + L+ F +K G+ Y SL+ A +++ A + E G++ +
Sbjct: 307 YVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPN 366
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L Y G VEK + + MK L I ++ K A A +V++
Sbjct: 367 ERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQ 426
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+ G ++TY ++++ + R G SKA + +MQ+ GF + Y+S + ++G
Sbjct: 427 QITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSG 486
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
+ +A M+ K E N YTT+I + A + D +
Sbjct: 487 DTEEVTETLAVMREKKLEVNA-------------------RTYTTLIHGWLAAADPDQAI 527
Query: 310 KFYNEFRMNGGVIDRAMAG-IMVGVFSKLSQIEEL 343
Y + + +G +D A++ ++ G+ S SQ L
Sbjct: 528 SCYEQAKASGLQLDSALSNCLLSGLISCASQNSTL 562
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 132/311 (42%), Gaps = 19/311 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ + + GD A F E+ + + H+Y L + ++ +
Sbjct: 20 YGLLVDFYARHGDKVAARATF---EAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 76
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M +GI + +V+ S+I +AS + AE F++ + + ++ V+ +V Y + G
Sbjct: 77 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 136
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+E ++ M+ + + ++NGF++ R + + +L + G P TY
Sbjct: 137 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYG 196
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
I+ + + G +KA + EM + G + Y+ ++ Y + G A ++ M
Sbjct: 197 CIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSA 256
Query: 265 GCEPNVWIYNSLMDMHGRA----------------KNLRQLEKYTTVISAYNMAREFDMC 308
G +P++ IYN L+ +A + L +E YT+++ Y
Sbjct: 257 GLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKA 316
Query: 309 VKFYNEFRMNG 319
++ ++ + G
Sbjct: 317 LEVFDRIKTAG 327
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 135/273 (49%), Gaps = 3/273 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E MK+ G D Y +M F KIGD A L E ++L P+ Y L D+
Sbjct: 41 EGMKTEGPAPDIVTYNTLMNGFCKIGDL--FTAKKLMGEISLVNLEPNVI-TYTTLIDAY 97
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
KS + L + +M K ++ D Y ++ +V+ A+ +F+E EE G++ +
Sbjct: 98 CKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNR 157
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +EG V + + M + + +++G K A +++
Sbjct: 158 FSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQV 217
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L+ + +P VTY+++I+ +C++G +K E + EM++K V+ YSS+V Y K G
Sbjct: 218 LLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGL 277
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ +AM ++ KM + PNV++Y +L+D + +A
Sbjct: 278 LNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 160/356 (44%), Gaps = 29/356 (8%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ M S G++ D Y +M+ F+K G D+ +A E +S D+ Y +L
Sbjct: 355 FKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTE-KSSGFDVVA-----YNVL 408
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L K G+ +E F M++ G+ D + + ++I ++ + A +L E + G+
Sbjct: 409 INGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGL 467
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ LV G +EKT++++ M + + +++ SK R +
Sbjct: 468 KPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILH 527
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++QL+ G TY ++I+ +CR+G+ +A VF +M KG ++ Y++++ Y
Sbjct: 528 MHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYC 587
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LE 290
+ ++ A + ++M +G PNV YN L+ A+ +++
Sbjct: 588 ISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNAT 647
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS---KLSQIEEL 343
Y ++S + CVK Y E G V +++ F+ K+SQ +EL
Sbjct: 648 TYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKEL 703
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 5/277 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIM-EAFYKIGDSEKVAALFLECESRKLDLTPSST 60
N + L +MKS G+ +S C I+ + G+ EK L + TP++
Sbjct: 451 NLGNALKLLNEMKSYGLKPNS-ITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTT- 508
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+K + D+ KS RA IL + G+ D S Y +LI +F + ++ A +FK+
Sbjct: 509 --HKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKD 566
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
KG+L D+ + L+ Y ++K V M ++ + +++ G S R
Sbjct: 567 MMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARL 626
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A + Q+ +G +P TY +++ + +IG + K++ EM KGF Y+
Sbjct: 627 IKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNV 686
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+++ + K ++ A L+ +M+ +G PN Y+ L+
Sbjct: 687 LISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 154/348 (44%), Gaps = 18/348 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ G+V + Y ++++ +K G+ + L R + +Y L D
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF---DVVVYTALMDG 201
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G A F+ + E+ ++ + Y++LI + +V E L +E EEK + +
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ V+ +V Y ++G++ + ++V+ M + + + +++G+ K A+ +++
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ S+G S +N R G +A+++F +M +G V Y+SM+ + K G
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---------MHGRAKNLRQL------EKYTT 294
+ DA + +M K +V YN L++ +RQL + T
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNT 441
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+I+AY +K NE + G + I+V +IE+
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 35/220 (15%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S + +L D ++G ++ MK +G D Y +L+ F I ++ A++L
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E S+ N E N+ +++ + K
Sbjct: 76 GEI---------------------------------SLVNLEPNV--ITYTTLIDAYCKS 100
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A+ +Y+++ + +P VTY I+N C+ G +A+ VF EM++ G +Y
Sbjct: 101 QCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSY 160
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++++ K G + +A L +M +G +V +Y +LMD
Sbjct: 161 ATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMD 200
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V+++G+ + AV++ E + ++G P VTY +++N +C+IG A+K+ E+
Sbjct: 22 VLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLV 81
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKN- 285
+ V+ Y++++ Y K+ + DA+ + +M K P+V Y +M+ G+ +
Sbjct: 82 NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141
Query: 286 ---LRQLEKYTTVISAYNMAREFDMCVKFYN---EFRMNGGVIDRAMAGIMVGVFSKL 337
R++E+ V + ++ A D K N F + G ++ R + G V V++ L
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI-GFDVVVYTAL 198
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 149/313 (47%), Gaps = 22/313 (7%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE- 78
LD I+ A+ + G ++ A+F + L+PS Y ++ D GK GR+++
Sbjct: 230 LDVRACTTILHAYSRNGKYKQAIAMFERM--KDCGLSPSLV-TYNVMLDVYGKMGRSWDK 286
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
IL +M+ +G+ D +++I + + A+E F E + G + L+
Sbjct: 287 ILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQ 346
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
++ + G+ + L +++ M++ + +V + + Y V + + +G +P
Sbjct: 347 VFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMP 406
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
VTY ++INAY R G KA ++F +M++ G V Y+S++A+ GK R + ++++
Sbjct: 407 NAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKIL 466
Query: 259 AKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQL-------------EKYTTVISAYNM- 301
+ M+ GC PN +N+L+ M G+ K + + + + T+ISAY
Sbjct: 467 SDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRC 526
Query: 302 AREFDMCVKFYNE 314
E D K Y+E
Sbjct: 527 GSELD-AAKMYDE 538
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 130/275 (47%), Gaps = 3/275 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M AG + Y ++ A + GD + ++ L+ R P+ T + ++
Sbjct: 536 YDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDM--RNKGFKPNETS-FSLMLHC 592
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G + + +D+ + I + +LI + V+ E F+E + G D
Sbjct: 593 YAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPD 652
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ +F ++ ++ + M E+ ++++ ++ + L ++N +++R W A ++ +
Sbjct: 653 MVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILK 712
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
LI G P V+Y +II +CR GL +A +V EM +G C+ Y++ V+ Y G
Sbjct: 713 GLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRG 772
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+ +++ M K C+PN Y ++D + +A+
Sbjct: 773 MFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKAR 807
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 130/320 (40%), Gaps = 38/320 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++M++ G+ D ++ A + G + F+E +S + T Y L
Sbjct: 288 LDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYE---PGTVTYNAL 344
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
GK+G E L ++M++ D Y L+ ++ + + KG+
Sbjct: 345 LQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGV 404
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC-------------------- 166
+ + + ++ Y G K L++ MK + + C
Sbjct: 405 MPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIK 464
Query: 167 -ISCVIVNGFSKRRAYWAAV--------------KVYEQLISQGCIPGQVTYASIINAYC 211
+S + +NG R W + V+ ++ + G PG+ T+ ++I+AY
Sbjct: 465 ILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYG 524
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
R G A K++ EM + GF C Y++++ + G + A ++ M+ KG +PN
Sbjct: 525 RCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNET 584
Query: 272 IYNSLMDMHGRAKNLRQLEK 291
++ ++ + + N+R LE+
Sbjct: 585 SFSLMLHCYAKGGNVRGLER 604
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 136/294 (46%), Gaps = 18/294 (6%)
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILE-DPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D LGKS RA + ++ G ++ D +I ++ +A +L +
Sbjct: 169 DVLGKSERAILLFEWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIALKLLDKIPIDKY 228
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV- 185
D+ ++ Y G ++ + + E MK+ L+ S V+++ + K W +
Sbjct: 229 SLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKIL 288
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ +++ ++G + T +++I+A R GL ++A++ F+E++ G++ V Y++++ ++
Sbjct: 289 DLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVF 348
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL----------------MDMHGRAKNLRQL 289
GK G +A+ ++ +M+ C + YN L +D R +
Sbjct: 349 GKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNA 408
Query: 290 EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
YTTVI+AY A + ++ +N+ + +G V + ++ + K S+ EE+
Sbjct: 409 VTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEM 462
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 131/307 (42%), Gaps = 38/307 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M G++ ++ Y ++ A+ + G ++V AL L + +K P+ IL L
Sbjct: 397 DTMTRKGVMPNAVTYTTVINAYGRAG--KEVKALQLFNQMKKSGCVPNVCTYNSILA-LL 453
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK R+ E++K DM+ G + + +L+ + K +F+E + G
Sbjct: 454 GKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGK 513
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ F L+ Y G ++ + M A ++N ++R + AA V
Sbjct: 514 DTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLD 573
Query: 191 LISQGCIPGQVTYASIINAYC---------RIG--LYSKA-------------------- 219
+ ++G P + +++ +++ Y RIG +Y
Sbjct: 574 MRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRA 633
Query: 220 ----EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
E+ F E+ + G+ +V ++SM++++ K A +++ ++ G +P++ YNS
Sbjct: 634 VRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNS 693
Query: 276 LMDMHGR 282
LM+M+ R
Sbjct: 694 LMNMYAR 700
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 100/215 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L + G+ G + K + +M + G + Y +L+ + A + K AE + +
Sbjct: 516 FNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMR 575
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + F ++ Y + G V + + + + ++ S + ++ K RA
Sbjct: 576 NKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVR 635
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ +E+L+ G P V + S+++ + + +Y +A+K+ +++ G +V Y+S++
Sbjct: 636 GMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLM 695
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
MY + G A ++ + G P++ YN+++
Sbjct: 696 NMYARRGECWKAEEILKGLIKSGESPDLVSYNTII 730
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 29/188 (15%)
Query: 160 ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS-----IINAYCRIG 214
E++I + + V G S+R A+ ++E ++S + G V S +I R
Sbjct: 158 EVDIVSLLKALDVLGKSER-----AILLFEWVVSNS-VSGDVKLDSKAVELMIRILGRES 211
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
YS A K+ ++ + V A ++++ Y + G+ + A+ + +MK G P++ YN
Sbjct: 212 KYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYN 271
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
++D++G+ M R +D + +E R G D ++
Sbjct: 272 VMLDVYGK------------------MGRSWDKILDLLDEMRNEGLQFDEFTCSTVISAC 313
Query: 335 SKLSQIEE 342
+ I E
Sbjct: 314 GREGLINE 321
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 135/273 (49%), Gaps = 3/273 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E MK+ G D Y +M F KIGD A L E ++L P+ Y L D+
Sbjct: 41 EGMKTEGPAPDIVTYNTLMNGFCKIGDL--FTAKKLMGEISLVNLEPNVI-TYTTLIDAY 97
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
KS + L + +M K ++ D Y ++ +V+ A+ +F+E EE G++ +
Sbjct: 98 CKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNR 157
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +EG V + + M + + +++G K A +++
Sbjct: 158 FSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQV 217
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L+ + +P VTY+++I+ +C++G +K E + EM++K V+ YSS+V Y K G
Sbjct: 218 LLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGL 277
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ +AM ++ KM + PNV++Y +L+D + +A
Sbjct: 278 LNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 160/356 (44%), Gaps = 29/356 (8%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ M S G++ D Y +M+ F+K G D+ +A E +S D+ Y +L
Sbjct: 355 FKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTE-KSSGFDVVA-----YNVL 408
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L K G+ +E F M++ G+ D + + ++I ++ + A +L E + G+
Sbjct: 409 INGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGL 467
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ LV G +EKT++++ M + + +++ SK R +
Sbjct: 468 KPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILH 527
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++QL+ G TY ++I+ +CR+G+ +A VF +M KG ++ Y++++ Y
Sbjct: 528 MHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYC 587
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LE 290
+ ++ A + ++M +G PNV YN L+ A+ +++
Sbjct: 588 ISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNAT 647
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS---KLSQIEEL 343
Y ++S + CVK Y E G V +++ F+ K+SQ +EL
Sbjct: 648 TYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKEL 703
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 5/277 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIM-EAFYKIGDSEKVAALFLECESRKLDLTPSST 60
N + L +MKS G+ +S C I+ + G+ EK L + TP++
Sbjct: 451 NLGNALKLLNEMKSYGLKPNS-ITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTT- 508
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+K + D+ KS RA IL + G+ D S Y +LI +F + ++ A +FK+
Sbjct: 509 --HKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKD 566
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
KG+L D+ + L+ Y ++K V M ++ + +++ G S R
Sbjct: 567 MMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARL 626
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A + Q+ +G +P TY +++ + +IG + K++ EM KGF Y+
Sbjct: 627 IKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNV 686
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+++ + K ++ A L+ +M+ +G PN Y+ L+
Sbjct: 687 LISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 154/348 (44%), Gaps = 18/348 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ G+V + Y ++++ +K G+ + L R + +Y L D
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF---DVVVYTALMDG 201
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G A F+ + E+ ++ + Y++LI + +V E L +E EEK + +
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ V+ +V Y ++G++ + ++V+ M + + + +++G+ K A+ +++
Sbjct: 262 VIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFK 321
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ S+G S +N R G +A+++F +M +G V Y+SM+ + K G
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---------MHGRAKNLRQL------EKYTT 294
+ DA + +M K +V YN L++ +RQL + T
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNT 441
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+I+AY +K NE + G + I+V +IE+
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 35/220 (15%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S + +L D ++G ++ MK +G D Y +L+ F I ++ A++L
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E S+ N E N+ +++ + K
Sbjct: 76 GEI---------------------------------SLVNLEPNV--ITYTTLIDAYCKS 100
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A+ +Y+++ + +P VTY I+N C+ G +A+ VF EM++ G +Y
Sbjct: 101 QCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSY 160
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++++ K G + +A L +M +G +V +Y +LMD
Sbjct: 161 ATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMD 200
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V+++G+ + AV++ E + ++G P VTY +++N +C+IG A+K+ E+
Sbjct: 22 VLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLV 81
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKN- 285
+ V+ Y++++ Y K+ + DA+ + +M K P+V Y +M+ G+ +
Sbjct: 82 NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141
Query: 286 ---LRQLEKYTTVISAYNMAREFDMCVKFYN---EFRMNGGVIDRAMAGIMVGVFSKL 337
R++E+ V + ++ A D K N F + G ++ R + G V V++ L
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI-GFDVVVYTAL 198
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 174/418 (41%), Gaps = 82/418 (19%)
Query: 7 LHYYEKMK--------SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE----------- 47
L +E+MK + +++D C +EA +K+ D+ K A LF
Sbjct: 393 LRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRL 452
Query: 48 CESRKLDLTPS--STHMYKI----------LCDSLGKSGRAFEILKFFRDMKEKGILEDP 95
C+++KLD S +KI L D LGK GR + + + M + + +
Sbjct: 453 CKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNA 512
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV----------------------- 132
VY SLI SF + ++FKE +G DL +
Sbjct: 513 VVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEE 572
Query: 133 -----FLKLVLMY-------IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
F+ V+ Y ++ G +T E+ +MK + ++GF K
Sbjct: 573 IKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGK 632
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A ++ E++ ++G P VTY S+I+ +I +A +F E + G + VV YSS
Sbjct: 633 VNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSS 692
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------KNLRQLE 290
++ +GK GRI +A ++ ++ KG PNV+ +N L+D +A +N++ L+
Sbjct: 693 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLK 752
Query: 291 ------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ +I+ R+F+ F+ E + G + M+ +K I E
Sbjct: 753 GTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAE 810
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 18/291 (6%)
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
C K F++++ R K + S Y +LI + +S+ E + LF + +E G
Sbjct: 173 CIKSNKLREGFDLIQCMRKFKFRPAF---SAYTTLIGALSSVQESDIMLTLFHQMQELGY 229
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ +F ++ ++ EG ++ L +++ MK+ L+ + V ++ F K A K
Sbjct: 230 EVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWK 289
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ S G +P VTY S+I C+ +A ++F +M+Q C AY++M+ YG
Sbjct: 290 FFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYG 349
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ---------------LEK 291
G+ +A L+ + K +GC P+V YN ++ G+ L + L
Sbjct: 350 SAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLST 409
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y +I A E + K + + G + IM+ K +++E
Sbjct: 410 YNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDE 460
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 125/276 (45%), Gaps = 3/276 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G VLD+ Y ++ F K G K L E +++ T + Y + D L K
Sbjct: 608 MKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVT---YGSVIDGLAK 664
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R E F + K G+ + +Y+SLI F + + A + +E +KG+ ++
Sbjct: 665 IDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 724
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ ++ + + L ++MKN + + +++NG + R + A ++++
Sbjct: 725 WNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQ 784
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
QG P +TY ++I + G ++A +F + G +Y++++ + R
Sbjct: 785 KQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAM 844
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+A ++ + + KGC + +L+D + + L Q
Sbjct: 845 EAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQ 880
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 118/270 (43%), Gaps = 4/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ ++KS G++ D Y ++ K ++ +F + E + + Y +
Sbjct: 290 FFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNR---NVPCAYAYNTMIM 346
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G +G+ E K +G + Y ++ + A F+E + K
Sbjct: 347 GYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAP 405
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+L + L+ M + G VE +V ++MK A L + ++++ K + A ++
Sbjct: 406 NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIF 465
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E + + C P +VT+ S+I+ + G A +++ +M V Y+S++ + K
Sbjct: 466 EGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKC 525
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR D ++ +M +GC P++ + N+ MD
Sbjct: 526 GRKEDGHKIFKEMIHRGCSPDLRLLNAYMD 555
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 129/331 (38%), Gaps = 52/331 (15%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + LGK GR E L+ F +MK K + S Y LI EV+ A ++ +
Sbjct: 376 YNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMK 434
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G+ ++ ++ + +++ + E M + + + C +++G K+
Sbjct: 435 EAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVD 494
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM---------------- 226
A ++YEQ++ IP V Y S+I ++ + G K+F EM
Sbjct: 495 DAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYM 554
Query: 227 -------------------QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
+ +GF V++YS ++ K G R+ L MK +GC
Sbjct: 555 DCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCV 614
Query: 268 PNVWIYNSLMD---MHGRAKNLRQLEK-------------YTTVISAYNMAREFDMCVKF 311
+ YN+ +D G+ QL + Y +VI D
Sbjct: 615 LDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYML 674
Query: 312 YNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ E + NG ++ + ++ F K+ +I+E
Sbjct: 675 FEEAKSNGLELNVVIYSSLIDGFGKVGRIDE 705
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 127/317 (40%), Gaps = 37/317 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ K +A V+D C+I+E+ D E +LF+E S K DL +
Sbjct: 56 WTKSGTAKEVVDD--VCKILESGNWGPDVENALSLFVE--SPKTDL----------VIGV 101
Query: 70 LGKSGRAFEILKFFRDMKEKGILED----PSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L ++ + + +FR + K D P Y SL+ A + E++ E G
Sbjct: 102 LRRAKDVNQAISYFRWTERK---TDQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSIAG 158
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ ++L+L I+ + + ++++ M+ + + ++ S + +
Sbjct: 159 FGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIML 218
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++ Q+ G + ++I + R G A + EM+ +V Y+ + +
Sbjct: 219 TLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCF 278
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK------- 291
GK G++ A + ++K G P+ Y S++ + + L Q+E+
Sbjct: 279 GKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCA 338
Query: 292 --YTTVISAYNMAREFD 306
Y T+I Y A +FD
Sbjct: 339 YAYNTMIMGYGSAGKFD 355
>gi|125556718|gb|EAZ02324.1| hypothetical protein OsI_24426 [Oryza sativa Indica Group]
gi|125598467|gb|EAZ38247.1| hypothetical protein OsJ_22623 [Oryza sativa Japonica Group]
Length = 478
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 141/297 (47%), Gaps = 3/297 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S L M++AG+ Y +++ A + G + + AL LE R+L L P + H Y
Sbjct: 69 SSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEM--RRLGLRPDAAH-YN 125
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L + L + + M + G+ + Y L+ ++A ++ + + E + +
Sbjct: 126 ALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRR 185
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ D + LV +Y + GM +K +++ M+ + + I +++ F K A
Sbjct: 186 GIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADA 245
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
KV++++ ++G P T+ S+I +CR+G +A + F MQ++G + ++++
Sbjct: 246 RKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISR 305
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
G+ G+ + +L M+ +G + + +Y L+D++G+ + R + A N+
Sbjct: 306 LGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENL 362
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 126/273 (46%), Gaps = 3/273 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK GI LD+ Y ++ + G +K L +E + ++L +Y L D+ G
Sbjct: 181 EMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVEL---DVKIYNGLIDTFG 237
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ + K F M +G+ D + + SLI + K A F +E+GM D +
Sbjct: 238 KYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPK 297
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+F+ ++ E+G ++ ++ M+N L S + V+V+ + + + A L
Sbjct: 298 IFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAAL 357
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
++ + + NAY + GL + V M+ +G + +V + ++ +G GR
Sbjct: 358 KAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRH 417
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+A+ ++ +K G P+V Y +LM RAK
Sbjct: 418 LEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAK 450
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++KM + G+ D + ++ ++G++++ F + + P ++ +
Sbjct: 249 FDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPK---IFVTIISR 305
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ G+ EI K F M+ +G+ E +VYA L+ + + A + + + +
Sbjct: 306 LGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLS 365
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+F L Y ++G+ E+T+ V++ M+ + + + +++N F + A+ V +
Sbjct: 366 PSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQ 425
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
+ G P VTY +++ A+ R + KA +F
Sbjct: 426 HIKDSGMSPDVVTYTTLMKAFMRAKKFEKACPLF 459
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 121/267 (45%), Gaps = 3/267 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M + ++ + I+ K +K LF + S TP + Y L D
Sbjct: 848 YEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCT---YGPLLDG 904
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR E + F +M + G + ++Y LI F +V A ELFK +G+ D
Sbjct: 905 LLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPD 964
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+ + LV E G V+ L E +K L + ++++G + A+ +Y+
Sbjct: 965 LKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYD 1024
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ S+G P TY S+I G+ +A K++ E+Q G + V Y++++ Y +G
Sbjct: 1025 EMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSG 1084
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A + +M GC PN + L
Sbjct: 1085 NSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 127/307 (41%), Gaps = 38/307 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ + KMK++ D Y +++ F GD +V + E E+ D + IL
Sbjct: 319 MELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEA---DGYAPDVITFTIL 375
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
++L K+G E M+++G+L + Y +LI + + A +LF E G+
Sbjct: 376 VNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGV 435
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMK--NAELNISDCISC--------------V 170
+ ++ + Y + G +K LE E MK NI C + V
Sbjct: 436 VPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKV 495
Query: 171 IVNG-------------------FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
I N +SK A+++ + C P + S+IN
Sbjct: 496 IFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLY 555
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ G +A K+F ++ VV Y++++A GK G+++ AM L A M GC PN
Sbjct: 556 KAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTI 615
Query: 272 IYNSLMD 278
+N+++D
Sbjct: 616 TFNTILD 622
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 133/311 (42%), Gaps = 19/311 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++E F + + E LF E ++ Y +L D+ GKSG+ E+ + +
Sbjct: 793 YNFLIEGFLGVHNDEMAWNLFTEMKNAG---CAPDVFTYNLLLDAHGKSGKINELFELYE 849
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M + + +I + + A +LF + + L+ ++ G
Sbjct: 850 QMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSG 909
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+E+ E+ E M + ++ I +++NGF K A +++++++ +G P +Y
Sbjct: 910 RLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYT 969
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S++ C G A F +++Q G +AY+ M+ G++ RI +A+ L +M+ +
Sbjct: 970 SLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSR 1029
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMC 308
G P+++ YNSL+ G A + Q K Y +I Y+M+ D
Sbjct: 1030 GINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSA 1089
Query: 309 VKFYNEFRMNG 319
Y + G
Sbjct: 1090 YAVYKRMMVGG 1100
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 142/337 (42%), Gaps = 24/337 (7%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y +M G+ + +M A K D+E V +L E ES L L P+ + Y I
Sbjct: 214 LEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMES--LGLKPN-IYTYTIC 270
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
LG++GR E + + M++ G D Y LI + + ++ A ELF + +
Sbjct: 271 IRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSH 330
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAV 185
D ++ ++ + + G + + E M+ A+ D I+ ++VN K A
Sbjct: 331 KPDRVTYITMLDKFSDCGDLGRVKEFWSEME-ADGYAPDVITFTILVNALCKAGNIDEAF 389
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ + + QG +P TY ++I+ R+ A +F M+ G Y + Y
Sbjct: 390 HLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFY 449
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREF 305
GK+GR A+ KMK +G PN+ N+ ++ S M R
Sbjct: 450 GKSGRSDKALETFEKMKIRGIAPNIVACNA------------------SLYSLAEMGRLR 491
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ V F N + NG D +M+ +SK Q++E
Sbjct: 492 EAKVIF-NRLKSNGLAPDSVTYNMMMKCYSKAGQVDE 527
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 107/261 (40%), Gaps = 19/261 (7%)
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
F R KE G+ Y LI F + ++A LF E + G D+ + L+ +
Sbjct: 777 FIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHG 836
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ G + + E+ E M + + +I+ K + A+ ++ L+S P
Sbjct: 837 KSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPC 896
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY +++ + G +A+++F EM G Y+ ++ +GKTG + A L +M
Sbjct: 897 TYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRM 956
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
+G P+ L+ YT+++ A D + ++ + + G
Sbjct: 957 VREGIRPD-------------------LKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLY 997
Query: 322 IDRAMAGIMVGVFSKLSQIEE 342
+D +M+ + +IEE
Sbjct: 998 LDSIAYNLMIDGLGRSHRIEE 1018
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 113/258 (43%), Gaps = 7/258 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYK 64
L + M++ G+V + Y ++ + K G S+K F + + R + ++ + +Y
Sbjct: 424 LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLY- 482
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
SL + GR E F +K G+ D Y ++ ++ +V A EL + E
Sbjct: 483 ----SLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSEN 538
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D+ V L+ + G V++ ++ +K+ +L + ++ G K A
Sbjct: 539 QCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRA 598
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++++ + GC P +T+ +I++ C+ A K+ +M V+ +++++
Sbjct: 599 MELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHG 658
Query: 245 YGKTGRIRDAMRLVAKMK 262
R+ DA+ L +MK
Sbjct: 659 LVIEKRVSDAIWLFHQMK 676
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 112/248 (45%), Gaps = 7/248 (2%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ + Y L L +SG E L+ +R M +G+ +++L+ + + + + L
Sbjct: 193 NAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLL 252
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E E G+ ++ + + + G +++ +++ M++ V+++
Sbjct: 253 EEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTA 312
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A++++ ++ + P +VTY ++++ + G + ++ + EM+ G+ V+ +
Sbjct: 313 GKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITF 372
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK 291
+ +V K G I +A L+ M+ +G PN+ YN+L+ R L +E
Sbjct: 373 TILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMET 432
Query: 292 YTTVISAY 299
V +AY
Sbjct: 433 LGVVPTAY 440
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
+E+M G ++ Y ++ F K GD LF + E + DL S T + LC
Sbjct: 918 FEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLK-SYTSLVGCLC 976
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++ GR + L +F +K+ G+ D Y +I ++ A L+ E + +G+
Sbjct: 977 EA----GRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGIN 1032
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
DL + L+L GMVE+ ++ E ++ L + ++ G+S +A V
Sbjct: 1033 PDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAV 1092
Query: 188 YEQLISQGCIPGQVTYASIIN 208
Y++++ GC P T+A + N
Sbjct: 1093 YKRMMVGGCSPNTGTFAQLPN 1113
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 103/257 (40%), Gaps = 20/257 (7%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F M+E G + Y LI + A E+++ +G+ L+ F L++ +
Sbjct: 182 FGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGK 241
Query: 143 EGMVEKTLEVVESMKNAEL--NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
E ++E M++ L NI C+ V G + R A ++ +++ GC P
Sbjct: 242 RRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRID--EACRIMKRMEDDGCGPDV 299
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY +I+A C G A ++F++M+ V Y +M+ + G + ++
Sbjct: 300 VTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSE 359
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKN----------------LRQLEKYTTVISAYNMARE 304
M+ G P+V + L++ +A N L L Y T+IS
Sbjct: 360 MEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNR 419
Query: 305 FDMCVKFYNEFRMNGGV 321
D + +N G V
Sbjct: 420 LDDALDLFNNMETLGVV 436
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 110/287 (38%), Gaps = 23/287 (8%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
T + HM +IL R +++ F M+ + I D + Y + ++
Sbjct: 124 TETCNHMLEIL----RIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTP 179
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
F + E G + + L+ + ++ G+ + LE+ M L S ++
Sbjct: 180 FAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVAT 239
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
KRR + E++ S G P TY I R G +A ++ M+ G V
Sbjct: 240 GKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDV 299
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
V Y+ ++ G++ DAM L KMK +P+ Y +++D +L +++
Sbjct: 300 VTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVK----- 354
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+F++E +G D I+V K I+E
Sbjct: 355 --------------EFWSEMEADGYAPDVITFTILVNALCKAGNIDE 387
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 4/255 (1%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
S L +EKMK GI + + + ++G + +F +S L P S
Sbjct: 455 SDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGL--APDSV-T 511
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y ++ K+G+ E ++ DM E D V SLI + V A ++F +
Sbjct: 512 YNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLK 571
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ + + + L+ +EG V++ +E+ SM + I++ K
Sbjct: 572 DMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVD 631
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+K+ ++ + C+P +T+ +II+ S A +F +M++ CV + +
Sbjct: 632 LALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLP 691
Query: 243 AMYGKTGRIRDAMRL 257
+ K G + DA ++
Sbjct: 692 GVV-KNGLMEDAFKI 705
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 134/283 (47%), Gaps = 5/283 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E ++S G + D Y ++ K G + + + +F + + L Y + D
Sbjct: 285 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFAL---DARAYNAVVDG 341
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KSG+ + + +MKEK + + Y +++ A I + A LF+EA+ KG+ +
Sbjct: 342 FCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELN 401
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ L+ + + G +++ ++E M L + +++ K A+ ++
Sbjct: 402 VVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 461
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ C P TY+ +IN CR+ Y+KA + +MQ++G VV Y++M++ K G
Sbjct: 462 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 521
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
I DA L + K G P+ +N+L++ G + R +E Y
Sbjct: 522 NITDAYSLFERFKANGGIPDAASFNALIE--GMSNANRAMEAY 562
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 144/334 (43%), Gaps = 23/334 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILC 67
+EKM AG + Y ++ F+ G E +F E R K DLT +T+M
Sbjct: 215 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYM----- 269
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D + K+G + F D++ G L D Y+ LI + + +F +++G
Sbjct: 270 DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 329
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D + +V + + G V K E++E MK + + IV+G +K A +
Sbjct: 330 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 389
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+E+ S+G V Y+S+I+ + ++G +A + EM +KG V ++S++ K
Sbjct: 390 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK 449
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLEK--------- 291
I +A+ MK C PN + Y+ L++ R + + ++K
Sbjct: 450 AEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 509
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
YTT+IS + F+ NGG+ D A
Sbjct: 510 YTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 543
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 164/400 (41%), Gaps = 76/400 (19%)
Query: 18 IVLDSGCYCQIMEAFYKIGDSEKVAALFLE-----------CESRKLD----LTPSSTH- 61
I++D C +E Y+I D + A+LF C++RKL+ + S++
Sbjct: 127 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 186
Query: 62 -------MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI------------ 102
Y L D LGK G+ E + F M + G +P VY SLI
Sbjct: 187 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 246
Query: 103 ------------------------CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
C F + EV+ +F++ G L D+ + L+
Sbjct: 247 HKIFKELIRRGCKPDLTLLNTYMDCVFKA-GEVEKGRMIFEDIRSYGFLPDVRSYSILIH 305
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
+ G +T + +MK + +V+GF K A ++ E++ + P
Sbjct: 306 GLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQP 365
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
TY +I++ +I +A +F E + KG + VV YSS++ +GK GRI +A ++
Sbjct: 366 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 425
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVISAYNMA 302
+M KG PNV+ +NSL+D +A+ + + Y+ +I+
Sbjct: 426 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 485
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++++ F+ + + G V + M+ +K+ I +
Sbjct: 486 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 525
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 126/270 (46%), Gaps = 4/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ ++K+ G+ D Y ++ K G + LF + E+ + + + Y +
Sbjct: 5 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER---SVPCAYAYNTMIM 61
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G +GR + K ++E+G + + S++ +V A LF E +K
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + ++ M G VE+ +++ M++A L + ++V+ K R A K++
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E +GC P VTY S+I+ + G +A ++F +M G + V Y+S++ +
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR D ++ ++ +GC+P++ + N+ MD
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMD 270
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 63/105 (60%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K + +L +QG P V+Y S+I C+ G +AE++F +M+ + C AY++M+
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
YG GR DA +L+ +++ +GC P+V +NS++ G+ + + +
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDE 106
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
KFF ++K +G+ D Y S+I + AEELF + E + + + +++ Y
Sbjct: 4 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSKRRAYWAAVKVYEQLISQG 195
G E +++E ++ CI V I+ K+R A+ ++E ++ +
Sbjct: 64 GSAGRFEDAYKLLERLRE-----RGCIPSVVSFNSILTCLGKKRKVDEALSLFE-VMKKD 117
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
P TY II+ C G +A ++ EM+ ++ + MV K ++ +A
Sbjct: 118 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 177
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGR 282
++ +GC P+ Y SL+D G+
Sbjct: 178 KIFESASQRGCNPDCVTYCSLIDGLGK 204
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 137/277 (49%), Gaps = 9/277 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G+ D + ++ + G E LF E R ++ Y L D+
Sbjct: 279 FDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIE---QDIFTYNTLLDA 335
Query: 70 LGKSGR---AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ K G+ AF+I+ +M K I+ + Y+++I +A + A LF E + +
Sbjct: 336 VCKGGQMDLAFQIMS---EMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASI 392
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ +Y + G E+ L V + M+++ + ++ G+ K+ Y +
Sbjct: 393 GLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKR 452
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+E++ ++ P +TY+++I+ Y + GLY +A +VF E ++ G VV YS+++
Sbjct: 453 VFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALC 512
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
K G + A+ + +M +G PNV YNS++D GR+
Sbjct: 513 KNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRS 549
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 152/345 (44%), Gaps = 35/345 (10%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
SK+H+ +A S + A D + + ++ L ESR + Y
Sbjct: 98 SKMHFGRPKTAAAARHTSTAEEALRHAIRFASDDKGIDSVLLNFESRLC-----GSDDYT 152
Query: 65 ILCDSLGKSG------RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
L LG G R FE F +E+ E + +++I + +V++A+ +F
Sbjct: 153 FLLRELGNRGEWAKAIRCFE----FAVRREQRRNEQGKLASAMISILGRLGQVELAKNVF 208
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ A +G + F L+ Y G ++ ++V E+MK++ L + +++ K
Sbjct: 209 ETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKG 268
Query: 179 RA-YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A +++++++ G P ++T+ S++ R GL+ A +F EM +G ++ +
Sbjct: 269 GVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFT 328
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
Y++++ K G++ A +++++M K PNV Y+TVI
Sbjct: 329 YNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNV-------------------VTYSTVID 369
Query: 298 AYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y A D + +NE + +DR ++ +++KL + EE
Sbjct: 370 GYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEE 414
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M GI D Y +++A K G + A + E + + P+ Y + D
Sbjct: 314 FSEMLYRGIEQDIFTYNTLLDAVCKGGQMD--LAFQIMSEMPRKHIMPNVV-TYSTVIDG 370
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+GR E L F +MK I D Y +L+ +A + + A + KE E G+ +D
Sbjct: 371 YAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKD 430
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y ++G E+ V E MK + + +++ +SK Y A++V+
Sbjct: 431 AVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFR 490
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G V Y+++I+A C+ GL A EM ++G VV Y+S++ +G++G
Sbjct: 491 EFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 550
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 111/227 (48%), Gaps = 11/227 (4%)
Query: 63 YKILCDSLGKSG----RAFEILKFFRDMKEKGILEDPSVYASL--ICSFASIAEVKVAEE 116
Y + D+ GK G RA EI F +M G+ D + SL +C + E A
Sbjct: 258 YNAVIDACGKGGVDFNRAAEI---FDEMLRNGVQPDRITFNSLLAVCGRGGLWEA--ARN 312
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF E +G+ +D+ + L+ + G ++ +++ M + + +++G++
Sbjct: 313 LFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYA 372
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A+ ++ ++ +V+Y ++++ Y ++G + +A V EM+ G K V
Sbjct: 373 KAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAV 432
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y++++ YGK G+ + R+ +MK + PN+ Y++L+D++ +
Sbjct: 433 TYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKG 479
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 134/304 (44%), Gaps = 23/304 (7%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI--CSFASIAEVKVAE 115
++ + + L + G+SG E +K F MK G+ + Y ++I C + + A
Sbjct: 218 NTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGV-DFNRAA 276
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
E+F E G+ D F L+ + G+ E + M + +++
Sbjct: 277 EIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAV 336
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ--QKGFDK 233
K A ++ ++ + +P VTY+++I+ Y + G +A +F EM+ G D+
Sbjct: 337 CKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDR 396
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-- 291
V+Y++++++Y K GR +A+ + +M+ G + + YN+L+ +G+ ++++
Sbjct: 397 --VSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVF 454
Query: 292 --------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
Y+T+I Y+ + ++ + EF+ G D + ++ K
Sbjct: 455 EEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKN 514
Query: 338 SQIE 341
+E
Sbjct: 515 GLVE 518
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 38/208 (18%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ + +MK A I LD Y ++ + K+G E+ + E ES + Y L
Sbjct: 381 LNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIK---KDAVTYNAL 437
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
GK G+ E+ + F +MK + I + Y++LI ++ + A E+F+E ++ G+
Sbjct: 438 LGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGL 497
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ ++ L+ + G+VE +AV
Sbjct: 498 KADVVLYSALIDALCKNGLVE-----------------------------------SAVS 522
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIG 214
+++ +G P VTY SII+A+ R G
Sbjct: 523 FLDEMTKEGIRPNVVTYNSIIDAFGRSG 550
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 76/402 (18%), Positives = 159/402 (39%), Gaps = 78/402 (19%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L+ ++M+S+GI D+ Y ++ + K G E+V +F E ++ ++ + Y
Sbjct: 413 EEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIF---PNLLTY 469
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D K G E ++ FR+ K+ G+ D +Y++LI + V+ A E +
Sbjct: 470 STLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTK 529
Query: 124 KGMLRDLEVFLKLVLMYIEEG----------------MVEKTLEVVESMKNAELNISDCI 167
+G+ ++ + ++ + G M +L+VVE +E + D
Sbjct: 530 EGIRPNVVTYNSIIDAFGRSGSAECVIDPPYETNVSKMSSSSLKVVEDATESE--VGDKE 587
Query: 168 SCVIVNGFSK---------------RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
I+ F + R+ + V+ ++ P VT+++I+NA R
Sbjct: 588 DNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSR 647
Query: 213 I---------------------------------GLYSKAEKVFIEMQQKGFDKCVVAYS 239
++ +A+ +F E++Q Y+
Sbjct: 648 CNSFEDASMLLEELRLFDNQVYGVAHGLLMGYGDNVWVQAQSLFDEVKQMDSSTASAFYN 707
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH----GRAKNLRQ---LEKY 292
++ M G+ R A +V + K + N+W NS +D+H G A+ + L
Sbjct: 708 ALTDMLWHFGQRRGAQLVVLEGKRRHVWENMW-SNSCLDLHLMSSGAARAMVHAWLLNIR 766
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNG-GVIDRAMAGIMVGV 333
+ V + + + + + ++ G G + RA+ ++ G+
Sbjct: 767 SIVFEGHELPQLLSILTGWGKHSKVVGDGALRRAIEALLTGM 808
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 134/274 (48%), Gaps = 7/274 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L++++K+ + G LD Y ++ ++G+++ L + + L + MY +
Sbjct: 148 LYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGK---LVRPNVVMYSTI 204
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DS+ K + + +M K I D Y+SLI F + ++K A +LF +
Sbjct: 205 IDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNI 264
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAA 184
++ F L+ + +EG V + V+ M KN +L++ S +++G+ + A
Sbjct: 265 NPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNS--LMDGYCLVKQVNKA 322
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ + +G P +Y+ +IN +C+I + +A K+F EM K VV Y+S+V
Sbjct: 323 KSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDG 382
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+GR A+ LV +M +G N+ YNS++D
Sbjct: 383 LCKSGRTSCALELVDEMHDRGQPSNIITYNSILD 416
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%)
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
F M ++G+ D Y+ +I F I V A +LF+E K + ++ + LV
Sbjct: 325 LFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLC 384
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ G LE+V+ M + + I++ K A+ + ++ +G P
Sbjct: 385 KSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIF 444
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY +IN C++G A+KVF ++ KG+ + Y+S++ + G + + +++KM
Sbjct: 445 TYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKM 504
Query: 262 KPKGCEPNVWIYNSLM 277
K GC PN Y L+
Sbjct: 505 KDNGCIPNAITYEILI 520
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 121/275 (44%), Gaps = 3/275 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q+ L ++M+ GI D +M F ++G + ++F + K P + +
Sbjct: 75 QTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVF--AKILKKGYHPDAV-TF 131
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL L G + L F + +G D Y +LI + E K A +L + +
Sbjct: 132 TILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDG 191
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
K + ++ ++ ++ ++ +V ++ M + ++ +++GF
Sbjct: 192 KLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKY 251
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV ++ ++IS P T++ +I+ +C+ G +A+ V M +K VV Y+S++
Sbjct: 252 AVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMD 311
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y ++ A L M +G P+VW Y+ +++
Sbjct: 312 GYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMIN 346
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 103/253 (40%), Gaps = 3/253 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M + LD Y +M+ + + K +LF R +TP Y I+ + K
Sbjct: 294 MMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQR--GVTPD-VWSYSIMINGFCK 350
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
E +K F +M K I + Y SL+ A EL E ++G ++
Sbjct: 351 IKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIIT 410
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ + V+K + ++ +K + V++NG K A KV+E L+
Sbjct: 411 YNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLL 470
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P TY S+IN +C G + + + +M+ G + Y ++ +
Sbjct: 471 VKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDEND 530
Query: 253 DAMRLVAKMKPKG 265
A +L+ +M +G
Sbjct: 531 KAEKLLREMIARG 543
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 131/286 (45%), Gaps = 3/286 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M + ++ D Y ++ + ++G+ + LF E R L PS Y L D L +
Sbjct: 321 MVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFR--GLVPSVV-TYNTLIDGLCR 377
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G ++ +M + G D + L+ F + + +A+ELF E +G+ D
Sbjct: 378 MGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFA 437
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
++ ++ ++ G K + E M V ++G K A ++ ++++
Sbjct: 438 YITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKML 497
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G +P VTY SII+A+ G KA VF+EM KG VV Y+ ++ Y GR++
Sbjct: 498 YNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLK 557
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
A+ +M KG PNV YN+L++ + + + Q K+ T + A
Sbjct: 558 LAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQA 603
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 100/193 (51%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M E GI Y +++ SF +V+ A +L + ++ G L + + LV G
Sbjct: 181 MVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGE 240
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+E+ E+++ M L +S ++ G+ ++ A ++ E+++S+G +P VTY +
Sbjct: 241 LEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNT 300
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
I+ C+ G S A K+ M K +V+Y++++ Y + G I +A L A+++ +G
Sbjct: 301 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRG 360
Query: 266 CEPNVWIYNSLMD 278
P+V YN+L+D
Sbjct: 361 LVPSVVTYNTLID 373
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 120/269 (44%), Gaps = 7/269 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMYKILCD- 68
++M G D + ++ F K+G+ LF E +R L P ++ +I+ +
Sbjct: 389 DEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQ--PDRFAYITRIVGEL 446
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
LG +AF + + +M +G D Y I + +K A EL K+ G++
Sbjct: 447 KLGDPSKAFGMQE---EMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVP 503
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + ++ ++ G + K V M + + S V+++ ++ R A+ +
Sbjct: 504 DHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHF 563
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ +G P +TY ++IN C++ +A K F EMQ KG Y+ ++
Sbjct: 564 FEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNL 623
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G ++A+RL M + +P+ +++L+
Sbjct: 624 GHWQEALRLYKDMLDREIQPDSCTHSALL 652
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 100/238 (42%), Gaps = 3/238 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M + G+ D Y + K+GD K + E +R P Y + D
Sbjct: 423 FDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF---PPDLITYNVFIDG 479
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G E + + M G++ D Y S+I + ++ A +F E KG+
Sbjct: 480 LHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPS 539
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y G ++ + M ++ + ++NG K R A K +
Sbjct: 540 VVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFT 599
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ ++G P + TY +IN C +G + +A +++ +M + +S+++ K
Sbjct: 600 EMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 113/250 (45%), Gaps = 20/250 (8%)
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ + VA E++ E G+ + + ++ + ++G V++ L+++ M+ +D
Sbjct: 169 SSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTY 228
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
V+VNG S A ++ ++++ G TY +I YC G +A ++ EM
Sbjct: 229 NVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLS 288
Query: 229 KGFDKCVVAYSSMVAMYG--KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+G +V Y+++ MYG K GR+ DA +L+ M K P++ YN+L+ + R N+
Sbjct: 289 RGAVPTLVTYNTI--MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 346
Query: 287 RQ----------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIM 330
+ + Y T+I + D+ ++ +E +G D I+
Sbjct: 347 GEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTIL 406
Query: 331 VGVFSKLSQI 340
V F KL +
Sbjct: 407 VRGFCKLGNL 416
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 126/315 (40%), Gaps = 19/315 (6%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q L +M+ G + + Y ++ G+ E+ L E L++ S + Y
Sbjct: 207 QEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEV---SAYTY 263
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + G+ E + +M +G + Y +++ V A +L
Sbjct: 264 DPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVN 323
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
K ++ DL + L+ Y G + + + ++ L S +++G +
Sbjct: 324 KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDV 383
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+++ +++I G P T+ ++ +C++G A+++F EM +G AY + +
Sbjct: 384 AMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIV 443
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
K G A + +M +G P++ YN +D + NL++ +
Sbjct: 444 GELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVP 503
Query: 292 ----YTTVISAYNMA 302
YT++I A+ MA
Sbjct: 504 DHVTYTSIIHAHLMA 518
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 95/222 (42%), Gaps = 17/222 (7%)
Query: 117 LFKEAEEKGMLRDLEVFLKLV-LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+F + KGML DL+ +++ L+ + ++ EV M + + +++ F
Sbjct: 141 VFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSF 200
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K+ A+++ Q+ GC+P VTY ++N G +A+++ EM + G +
Sbjct: 201 CKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSA 260
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQ---- 288
Y ++ Y + G++ +A RL +M +G P + YN++M GR + R+
Sbjct: 261 YTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDV 320
Query: 289 ---------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
L Y T+I Y + E R G V
Sbjct: 321 MVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLV 362
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 150/331 (45%), Gaps = 19/331 (5%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q ++ M AGI Y +++ K GD E LF++ R++ L+P
Sbjct: 269 NGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQ--MREMGLSPDVV- 325
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D GK G E+ F +MK+ G + D Y LI + ++ A E F E
Sbjct: 326 TYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM 385
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G+ ++ + L+ + +EGM++ +++ M+ L ++ +++ K
Sbjct: 386 KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNL 445
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K+ ++ G VTY ++++ C+ G +AE+VF M + G Y+++
Sbjct: 446 TEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTAL 505
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----LEKY----- 292
V Y K R+ DAM+++ +M +P++ +Y S++ H + L + LE+
Sbjct: 506 VHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGI 565
Query: 293 -------TTVISAYNMAREFDMCVKFYNEFR 316
TT+I AY A + + F+ E +
Sbjct: 566 SANPVISTTIIDAYFKAGKSSDALNFFQEMQ 596
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 161/355 (45%), Gaps = 19/355 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + + M+ G++ + Y +++A K G+ + L + + L + Y
Sbjct: 411 QGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT---Y 467
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D L K+GR E + FR M + GI + VY +L+ + ++ A ++ K+ E
Sbjct: 468 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 527
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ DL ++ ++ + + +E+T ++E MK+ ++ + IS I++ + K
Sbjct: 528 CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD 587
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ ++++ G VTY +I+ C+ G+ A F M G V Y+S++
Sbjct: 588 ALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLID 647
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ--------------- 288
K I A +L +M+ +G P++ + +L+D + + NL++
Sbjct: 648 GLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 707
Query: 289 -LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
L YT+++S ++ E KF+NE G + + + ++ + K Q++E
Sbjct: 708 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDE 762
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 112/271 (41%), Gaps = 40/271 (14%)
Query: 22 SGCYCQIMEAFYKIGDSEKVAALFLECESRKLDL-TPSSTHMYKILCDSLGKSGRAFEIL 80
SG + + F ++G E+ EC SR + T L L KSG +
Sbjct: 219 SGVFDVLFSVFVELGLLEEAN----ECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 274
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
KFF DM GI Y +I +++ + LF + E G+ D+ + L+ Y
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G +E+ + MK+ GC+P
Sbjct: 335 GKVGSLEEVASLFNEMKDV-----------------------------------GCVPDI 359
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
+TY +IN YC+ +A + F EM+ G VV YS+++ + K G ++ A++L
Sbjct: 360 ITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVD 419
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
M+ G PN + Y SL+D + +A NL + K
Sbjct: 420 MRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 450
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 140/344 (40%), Gaps = 71/344 (20%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--------------------CE 49
+ +M+ G+ D Y +++ + K+G E+VA+LF E C+
Sbjct: 312 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 371
Query: 50 SRKLD-------------LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
K+ L P+ Y L D+ K G +K F DM+ G+L +
Sbjct: 372 FEKMPRAFEYFSEMKNNGLKPNVV-TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEF 430
Query: 97 VYASLI---CSFASIAE------------VKV--------------------AEELFKEA 121
Y SLI C ++ E VK+ AEE+F+
Sbjct: 431 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 490
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G+ + +V+ LV YI+ +E +++++ M + + I+ G +R
Sbjct: 491 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 550
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ E++ S+G V +II+AY + G S A F EMQ G + +V Y +
Sbjct: 551 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 610
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+ K G + A+ +M G +PNV +Y SL+D G KN
Sbjct: 611 IDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLID--GLCKN 652
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 3/221 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+MKS GI + I++A++K G S F E + ++ T + Y +L D L
Sbjct: 558 EEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVT---YCVLIDGL 614
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+G + +F M G+ + +VY SLI ++ A++LF E + +GM D+
Sbjct: 615 CKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDI 674
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ ++ G +++ L ++ M + + +V+GFS+ A K + +
Sbjct: 675 TAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNE 734
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+I +G +P +V ++ Y + G +A ++ EM++ G
Sbjct: 735 MIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGL 775
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y+ +M S G+ + Y +++ K E LF E + R +TP T + L D
Sbjct: 626 YFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCR--GMTPDITA-FTALID 682
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G E L M E I D VY SL+ F+ E+ A + F E EKG+L
Sbjct: 683 GNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILP 742
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
+ + + L+ Y + G +++ +E+ M+ L
Sbjct: 743 EEVLCICLLREYYKRGQLDEAIELKNEMERMGL 775
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS-STHMYKILCD 68
+++M+ G+ D + +++ K G+ ++ L SR +L H+Y L
Sbjct: 662 FDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLI----SRMTELAIEFDLHVYTSLVS 717
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ G + KFF +M EKGIL + + L+ + ++ A EL E E G++
Sbjct: 718 GFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLIT 777
Query: 129 D 129
+
Sbjct: 778 E 778
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 142/293 (48%), Gaps = 16/293 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L ++ G+ E + + E + YA LI ++ ++ AE +F E
Sbjct: 158 YNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMR 217
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ V+ + ++ G +K E+ + MK + +++N + K +
Sbjct: 218 NYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSF 277
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+K++ +++S C P TY +++NA+ R GL KAE+VF +MQ+ G + V AY++++
Sbjct: 278 MALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALM 337
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------KNLRQ---- 288
Y + G A + + M+ GCEP+ YN L+D +G+A K++++
Sbjct: 338 EAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGIT 397
Query: 289 --LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
++ + ++SAY+ + C + N+ +G +D + M+ ++ +L Q
Sbjct: 398 PTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQ 450
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 138/301 (45%), Gaps = 12/301 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y ++ A + Y +++A+ G EK A+F E + L PSS +Y +
Sbjct: 178 YLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNYGL---PSSAVVYNAYING 234
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G + + + F+ MK+ Y LI + + +A +LF E +
Sbjct: 235 LMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPN 294
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + LV + EG+ EK EV E M+ A L ++ +S+ + A +++
Sbjct: 295 ICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFS 354
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ GC P + +Y +++AY + G AE VF +M++ G + ++ +++ Y K G
Sbjct: 355 LMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMG 414
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLEK--YTTVISAYN 300
+ ++ +M G + + ++ NS+++++GR LR +EK Y IS YN
Sbjct: 415 SVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYN 474
Query: 301 M 301
+
Sbjct: 475 I 475
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 153/369 (41%), Gaps = 57/369 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M++ G+ + Y + K G+S+K +F + K D +T Y +L +
Sbjct: 213 FAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIF---KRMKKDACKPTTETYTMLINL 269
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK+G++F LK F +M + Y +L+ +FA + AEE+F++ +E G+ D
Sbjct: 270 YGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPD 329
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR----------- 178
+ + L+ Y G E+ M++ ++V+ + K
Sbjct: 330 VYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFK 389
Query: 179 -----------RAYWAAVKVY---------EQLISQGCIPGQV--TYA--SIINAYCRIG 214
+++ + Y E++++Q C G TY S++N Y R+G
Sbjct: 390 DMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLG 449
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ K E+V M++ + + Y+ ++ YG+ G I L + KG +P+V
Sbjct: 450 QFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDV---- 505
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
+T+ I AY+ + + C++ + E +G D A +++
Sbjct: 506 ---------------VTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLAAC 550
Query: 335 SKLSQIEEL 343
S Q E++
Sbjct: 551 SNEDQTEQV 559
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILC 67
+ + ++ G +S Y I+ K GD+ A L+LE + R DL Y +
Sbjct: 163 FADSLEDMGHQSNSYTYGAIINGLCKAGDTSG-AILYLEKIKGRNCDL--DVVIAYSTIM 219
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
DSL K G E L F M KGI D Y SLI + K A L KG++
Sbjct: 220 DSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIM 279
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+++ F LV + ++GM+ + ++ M + + +++G AVKV
Sbjct: 280 PNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKV 339
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+E +I +G +P VTY+S+I+ +C+ +KA + EM G + VV +S+++ + K
Sbjct: 340 FELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCK 399
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNL-RQLEK 291
G+ A L M PN+ ++D H A +L R++EK
Sbjct: 400 AGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEK 450
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 4/199 (2%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
+ +K F M KG L + Y+SLI + + A L E G+ D+ + L+
Sbjct: 335 DAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLI 394
Query: 138 LMYIEEGMVEKTLEVVESMK--NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
+ + G E E+ +M + N+ C +I++G K + + A+ ++ ++
Sbjct: 395 GGFCKAGKPEAAKELFCTMHEHDQHPNLQTC--AIILDGLFKCQFHSEAISLFREMEKMN 452
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
V Y +++ C G + A+++F + KG VVAY++M+ K G + DA
Sbjct: 453 LELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAE 512
Query: 256 RLVAKMKPKGCEPNVWIYN 274
L+ KM+ GC PN + YN
Sbjct: 513 NLLMKMEENGCLPNEFTYN 531
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++NG A + + L G TY +IIN C+ G S A +++ +
Sbjct: 146 TLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGR 205
Query: 230 GFD-KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
D V+AYS+++ K G + +A+ L + M KG +P++ YNSL +HG N +
Sbjct: 206 NCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSL--IHGLC-NFGR 262
Query: 289 LEKYTTVISAYNMAREFDMC-VKFYNEFRMN---GGVIDRA--MAGIMVGV 333
++ TT++ NM R+ M V+ +N N G+I RA + G MV V
Sbjct: 263 WKEATTLLG--NMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHV 311
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 86/230 (37%), Gaps = 38/230 (16%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L +M ++G+ D + ++ F K G E LF C + D P+
Sbjct: 367 NINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELF--CTMHEHDQHPN-LQ 423
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
I+ D L K E + FR+M++ + + +Y ++ S ++ A+ELF
Sbjct: 424 TCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCL 483
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
KG+ D+ + ++ +EG+++ ++ M+
Sbjct: 484 PSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKME------------------------ 519
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
GC+P + TY + + S++ K + M+ KG
Sbjct: 520 -----------ENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGL 558
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 132/275 (48%), Gaps = 3/275 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
LH+++K+ + G LD Y ++ K+G L + + L + MY
Sbjct: 148 HQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGK---LVQPNAVMY 204
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ D++ K+ + + M K I D Y +LI F++++++ A +LF + ++
Sbjct: 205 NMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKK 264
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + ++ F LV + +EG V V+ M ++ +++G+
Sbjct: 265 ENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNK 324
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +++ + S G I Y +++N +C+I + +A +F EM+ + VV YSS++
Sbjct: 325 AKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLID 384
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K GRI A++LV +M +G PN+ Y+S++D
Sbjct: 385 GLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILD 419
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 19/279 (6%)
Query: 5 SKLHY----YEKMKSAGIVLDSGCYCQIMEAF---YKIGDSEKVAALFLECESRKLDLTP 57
SKL+Y + KMK I + + +++ F K+ D++ V A+ + K D+ P
Sbjct: 250 SKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMM-----KDDIKP 304
Query: 58 SSTHMYKILCD---SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
Y L D S+ K +A +I F M G++ + +Y +++ F I V A
Sbjct: 305 DVV-TYNSLMDGYCSINKVNKAKDI---FDSMASGGVIANVQIYTTMVNGFCKIKMVDEA 360
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
LF+E + ++ ++ + L+ + G + L++V+ M + + I++
Sbjct: 361 INLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDA 420
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K A+ + L QG P TY +I C+ G A+ VF ++ KG++
Sbjct: 421 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLD 480
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
V AY+ M+ + G A+ L++KM+ GC PN Y
Sbjct: 481 VYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTY 519
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 127/268 (47%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M + I D Y ++ F + LF + +K ++ P+ + + IL D
Sbjct: 224 YSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLF--NKMKKENINPN-VYTFNILVDG 280
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G+ + M + I D Y SL+ + SI +V A+++F G++ +
Sbjct: 281 FCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIAN 340
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++++ +V + + MV++ + + E M+ ++ + +++G K + A+K+ +
Sbjct: 341 VQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVD 400
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P VTY+SI++A C+ KA + ++ +G + Y+ ++ ++G
Sbjct: 401 EMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSG 460
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R+ DA + + KG +V+ Y ++
Sbjct: 461 RLEDAQNVFEDLLVKGYNLDVYAYTVMI 488
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 3/222 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M S G++ + Y ++ F KI ++ LF E RK+ P+ Y L D
Sbjct: 329 FDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKI--IPNVV-TYSSLIDG 385
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K GR F LK +M ++G + Y+S++ + V A L +++G+ D
Sbjct: 386 LCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPD 445
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G +E V E + N+ V++ GF + + A+ +
Sbjct: 446 MYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLS 505
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ GCIP TY +I + AEK+ EM +G
Sbjct: 506 KMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 1/223 (0%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP + KIL SL K+ L + M+ GI D + LI F+ + ++
Sbjct: 58 TPPTFQFNKIL-SSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSF 116
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+F + +KG F L+ +G + + L + + ++ ++NG
Sbjct: 117 SIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGL 176
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K AA+++ +++ + P V Y II+ C+ L + A ++ +M K V
Sbjct: 177 CKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDV 236
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y+++++ + ++ A+ L KMK + PNV+ +N L+D
Sbjct: 237 FTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVD 279
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG + +F I F + +KG + +LI + A + +G D
Sbjct: 109 LGLNSLSFSI---FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLD 165
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G + L++++ + + + + +I++ K + A +Y
Sbjct: 166 QVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYS 225
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q++++ P TY ++I+ + + + A +F +M+++ + V ++ +V + K G
Sbjct: 226 QMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEG 285
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH------GRAKN----------LRQLEKYT 293
++ DA ++A M +P+V YNSLMD + +AK+ + ++ YT
Sbjct: 286 KVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYT 345
Query: 294 TVISAYNMAREFDMCVKFYNEFR 316
T+++ + + D + + E R
Sbjct: 346 TMVNGFCKIKMVDEAINLFEEMR 368
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 151/349 (43%), Gaps = 19/349 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E G +S YC +++ K G+ + LF + P +Y L +
Sbjct: 449 FETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPV---VYTSLIRN 505
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GR + K F++M +G D ++ + + +V+ +F++ + G L D
Sbjct: 506 FFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPD 565
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G +T + +MK + +V+GF K A +V E
Sbjct: 566 VRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLE 625
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + P TY SII+ +I +A +F E + KG + V+ YSS++ +GK G
Sbjct: 626 EMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVG 685
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYT 293
RI +A ++ +M KG PNV+ +NSLMD +A+ + + Y+
Sbjct: 686 RIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYS 745
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+I+ ++++ F+ E + G V + M+ +K+ I +
Sbjct: 746 ILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITD 794
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 103/193 (53%)
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
S Y LI + A + + A EL ++ +E G + +F LV EG VE L +V+
Sbjct: 183 SAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDE 242
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
+K + L + V ++ F K A K + +L SQG P V+Y S+I C+ G
Sbjct: 243 VKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGR 302
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
S+AE++F +M+ + C AY++M+ YG G+ +A +L+ ++K +GC P+V +NS
Sbjct: 303 LSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNS 362
Query: 276 LMDMHGRAKNLRQ 288
++ G+ + + +
Sbjct: 363 ILTCLGKKRKVDE 375
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 128/279 (45%), Gaps = 3/279 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ MK G LD+ Y +++ F K G +K + E K+ P + Y + D
Sbjct: 589 FHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVL---EEMKVKRVPPTVATYGSIIDG 645
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K R E F + K KGI + VY+SLI F + + A + +E +KG+ +
Sbjct: 646 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 705
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ ++ + + L +SMK + + + +++NG + + Y A ++
Sbjct: 706 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 765
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ QG +P VTY ++I ++G + A +F + G ++++++
Sbjct: 766 EMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHAN 825
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
R +A + + + KGC NV SL+D +A+ L Q
Sbjct: 826 RAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQ 864
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 4/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ ++KS G+ D Y ++ K G + LF + E+ + P + + Y +
Sbjct: 274 FFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERA--VPCA-YAYNTMIM 330
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G +G+ K +KE+G + + S++ +V A LF EA +K
Sbjct: 331 GYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKKDAEP 389
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + ++ M G VE+ + + M++A L + ++V+ K + + A +++
Sbjct: 390 NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMF 449
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E +GC P VTY S+I+ + G A ++F M G + V Y+S++ +
Sbjct: 450 ETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMH 509
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR D ++ +M +GC+P++ + N+ MD
Sbjct: 510 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMD 539
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 14/289 (4%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
+ L +M+ G + + ++ A + G E AL E + L+ +
Sbjct: 198 PERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLE---PDIVL 254
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D GK+G KFF ++K +G+ D Y S+I + AEELF + E
Sbjct: 255 YNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQME 314
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSK 177
+ + + +++ Y G E ++++ +K CI V I+ K
Sbjct: 315 TERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKE-----RGCIPSVVSFNSILTCLGK 369
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+R A+ ++E + + P TY II+ C G +A + EM+ G ++
Sbjct: 370 KRKVDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLT 428
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ MV K + A + +GC PN Y SL+D G+ N+
Sbjct: 429 VNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNV 477
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P Y +I A +A ++ +MQ+ G++ V ++++V + GR+ A+ L
Sbjct: 180 PAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALAL 239
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
V ++K EP++ +YN +D G+A N+ DM KF++E +
Sbjct: 240 VDEVKGSCLEPDIVLYNVCIDCFGKAGNV-------------------DMAWKFFHELKS 280
Query: 318 NGGVIDRAMAGIMVGVFSK---LSQIEEL 343
G D M+ V K LS+ EEL
Sbjct: 281 QGLKPDDVSYTSMIWVLCKAGRLSEAEEL 309
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
V+ +M+ + + V++ ++ R A+++ Q+ G G + +++ A
Sbjct: 169 VIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALA 228
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
R G A + E++ + +V Y+ + +GK G + A + ++K +G +P+
Sbjct: 229 REGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDV 288
Query: 272 IYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEF 315
Y S++ + +A L + E+ Y T+I Y A +F+ K ++
Sbjct: 289 SYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQL 348
Query: 316 RMNG 319
+ G
Sbjct: 349 KERG 352
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 4/251 (1%)
Query: 36 GDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDP 95
G+ E A F E + LDLT + + L +L K+ R E + F + M E+
Sbjct: 234 GNLEDALAYFDELDD-SLDLTHFT---FNPLVAALCKAERTEEAIAFVKKMSERRCFPTL 289
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
Y SL+ F + + A KEA E+G + D + ++ + G VE+ E
Sbjct: 290 FTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHE 349
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
M+N +++GF K + A +VY Q++ G + VTY I++ C+ G
Sbjct: 350 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 409
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
++A F+ M+++G VV YS+++ + G + A+ L +M +GCEPN+ YN
Sbjct: 410 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 469
Query: 276 LMDMHGRAKNL 286
++ RA L
Sbjct: 470 IIRGLCRAGKL 480
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 20/311 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYK---IGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ +M++ G D+ Y +++ F K I + +V L+ T ST Y I+
Sbjct: 347 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG------TVVSTVTYNII 400
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K+GR E F M+E+G + Y++L+ F S V A ELF+ ++G
Sbjct: 401 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 460
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF-----SKRRAY 181
+L + ++ G + K E + L C N F +
Sbjct: 461 EPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL----CPDVYTFNSFLHGLCQRLDTV 516
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
V+++E ++SQG P +Y+ +++ CR G ++F EM +G VV ++++
Sbjct: 517 GDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTL 576
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ GR+ +A+ + +++ + P+ W Y SL+D R + + + + +
Sbjct: 577 IRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQGC 635
Query: 302 A-REFDMCVKF 311
A R +D+ V+F
Sbjct: 636 APRHYDLTVRF 646
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 14/252 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y ++ D L K+GR E + F DM G D VY +LI A I ++ A +
Sbjct: 149 YTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMV 208
Query: 123 EKGMLRDLE---VFLKLVLMYI-EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E G R +E V LV+ + G +E L + + ++ L+++ +V K
Sbjct: 209 ENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDS-LDLTHFTFNPLVAALCKA 267
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A+ +++ + C P TY S+++ + ++G +A E ++GF V Y
Sbjct: 268 ERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTY 327
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK 291
+S++ K GR+ + +M+ +G EP+ Y +L+D +AK + RQ+ +
Sbjct: 328 TSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQ 387
Query: 292 YTTVIS--AYNM 301
TV+S YN+
Sbjct: 388 SGTVVSTVTYNI 399
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 126/285 (44%), Gaps = 6/285 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + L Y++++ + + L + ++ A K +E+ A + R+ +
Sbjct: 235 NLEDALAYFDELDDS-LDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERR---CFPTLF 290
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D K GR E L ++ E+G + D Y S+I + V+ E F E
Sbjct: 291 TYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 350
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G D + L+ +++ M+ K V M + +S +I++G K
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 410
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + + +GC+ VTY+++++ +C G S A ++F M +G + +V+Y+ +
Sbjct: 411 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 470
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ + G++ A K+ + P+V+ +NS +HG + L
Sbjct: 471 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSF--LHGLCQRL 513
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 67/144 (46%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V ++G K A ++ +++ + C+P VTY ++++ + G +A + +M +K
Sbjct: 81 VFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEK 140
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G + Y+ ++ K GR+ +A R+ M GC P+ ++Y +L+ + L +
Sbjct: 141 GNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEA 200
Query: 290 EKYTTVISAYNMAREFDMCVKFYN 313
Y + AR + V +N
Sbjct: 201 LVYLNQMVENGCARGVEPDVVIHN 224
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 19/192 (9%)
Query: 167 ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
+ ++NG K A+ + +++ C P V + +IN CR +A V
Sbjct: 11 VCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLERA 67
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ G + V Y+ + K R+ DA +L+ KM K C P Y +L+D +A L
Sbjct: 68 VRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 127
Query: 287 RQ----------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIM 330
+ L+ YT VI + A + + + + NG D + +
Sbjct: 128 DEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTAL 187
Query: 331 VGVFSKLSQIEE 342
+ +K+ +++E
Sbjct: 188 ISGLAKIGKLDE 199
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 132/267 (49%), Gaps = 5/267 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+++KS+G + ++ + ++++F + E + + +L P T+ Y I ++L
Sbjct: 79 KQLKSSGSIPNATTFATLIQSFTNFHEIENLLKIL----ENELGFKPD-TNFYNIALNAL 133
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ + + M +GI+ D S + LI + +++ A + +E G+ D
Sbjct: 134 VEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDE 193
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +IEEG + L++ + M +++ V+VNGF K A++ +
Sbjct: 194 ITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLE 253
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G P QVT+ S++N +CRIG + A + M +KGFD V Y+S+++ K G
Sbjct: 254 VSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGE 313
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM 277
A+ ++ +M + C PN YN+L+
Sbjct: 314 FEKAIEILQQMILRECSPNTVTYNTLI 340
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 149/348 (42%), Gaps = 19/348 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M + G+ D + +M+ F + GD + + LT S K+L +
Sbjct: 182 EEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSV---KVLVNGF 238
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR E L+F ++ E+G D + SL+ F I V A ++ EKG D+
Sbjct: 239 CKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDV 298
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + G EK +E+++ M E + + +++ K AA +
Sbjct: 299 YTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARI 358
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L+S+G +P T+ ++I C A ++F EM+ KG YS ++ R
Sbjct: 359 LVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERR 418
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
+++A+ L+ +M+ GC N +YN+L+D +++ + E+ Y T
Sbjct: 419 LKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNT 478
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+I + + + ++ M G D+ ++ F ++ IE+
Sbjct: 479 LIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEK 526
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 133/308 (43%), Gaps = 12/308 (3%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L + M G D Y ++ K+G+ EK + + R+ +T
Sbjct: 278 NVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECS---PNTV 334
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L +L K R + KG+L D + +LI +A E+F+E
Sbjct: 335 TYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM 394
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ KG D + L+ E +++ L +++ M+++ + + +++G K R
Sbjct: 395 KNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRI 454
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++++Q+ G VTY ++I+ C+ +A ++ +M +G Y+S+
Sbjct: 455 EDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSL 514
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-------KNLRQLEKYTT 294
+ + + G I A +V M GCEP+++ Y +L+ RA K LR ++
Sbjct: 515 LTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGI 574
Query: 295 VIS--AYN 300
V++ AYN
Sbjct: 575 VLTPHAYN 582
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 3/208 (1%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
++ F +MK KG D Y+ LI S +K A L KE E G R+ V+ L+
Sbjct: 388 MEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDG 447
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ +E E+ + M+ ++ S +++G K + A ++ +Q+I +G P
Sbjct: 448 LCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPD 507
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+ TY S++ +CR+G KA + M G + + Y +++ + GR+ A +L+
Sbjct: 508 KFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLR 567
Query: 260 KMKPKGCEPNVWIYNSLMD---MHGRAK 284
++ KG YN ++ M R K
Sbjct: 568 SVQMKGIVLTPHAYNPVIQALFMRKRTK 595
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL DSL R E L ++M+ G + VY +LI ++ AEE+F + E
Sbjct: 406 YSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQME 465
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ R + L+ + VE+ ++++ M L ++ F +
Sbjct: 466 LLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIE 525
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + + + S GC P TY ++I CR G A K+ +Q KG AY+ ++
Sbjct: 526 KAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVI 585
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
R ++ MRL +M K P+ +
Sbjct: 586 QALFMRKRTKEGMRLFREMMEKSDPPDALTH 616
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 159/398 (39%), Gaps = 83/398 (20%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--------------------C 48
Y K+ AG+ LD+ Y ++ + + + + A+FL C
Sbjct: 226 YVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFC 285
Query: 49 ESRKLDLTP------------SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
E+R++D + Y ++ +L + GR E L F++M EK +
Sbjct: 286 EARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVH 345
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
Y LICS + A+++ EKG++ + + L+ Y ++G+ LE++ M
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405
Query: 157 K------NAEL------------NISDCISC-----------------VIVNGFSKRRAY 181
+ NA NI +S ++++G K
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDL 465
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+A K+ + G +P + TY+ I+ C+ GL +A +F +++KG V YS++
Sbjct: 466 GSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTL 525
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ------------- 288
+ Y K G++ D L+ KM GC PN YNSL+D + + KN ++
Sbjct: 526 IDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDI 585
Query: 289 ---LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
+ YT +I EFD +++ G D
Sbjct: 586 EPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPD 623
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D+L K G E F +KEKGI + +Y++LI + + +V L +
Sbjct: 487 YSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKML 546
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G + + + L+ Y +E ++ +V+ M ++ + ++++ K +
Sbjct: 547 SAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFD 606
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +++Q++S G P Y + I+AYC G AE + +M KG + Y+ +
Sbjct: 607 QAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFI 666
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
YG+ G I A ++ +M GCEP+ + Y+ L+ AK
Sbjct: 667 DAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAK 708
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 97/238 (40%), Gaps = 35/238 (14%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+ M E+ + + Y LI ++ A +L E G++ D + +
Sbjct: 434 MSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDT 493
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G+VE+ + ES+K + ++ I +++G+ K + ++++S GC+P
Sbjct: 494 LCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPN 553
Query: 200 QVTYASIINAYC-----------------------------------RIGLYSKAEKVFI 224
+TY S+I+ YC + + +A +F
Sbjct: 554 SITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFD 613
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+M G V Y++ + Y GR++DA L+ KM KG P+ +Y +D +GR
Sbjct: 614 QMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGR 671
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 32/280 (11%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+KM SAG V +S Y +++ + K + K A L ++ ++ D+ P++ Y IL D+L
Sbjct: 543 DKMLSAGCVPNSITYNSLIDGYCK-EKNFKEARLLVDIMIKR-DIEPAAD-TYTILIDNL 599
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + F M G D +Y + I ++ S +K AE L + KG++ D
Sbjct: 600 LKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDT 659
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD-CISCVI------------------ 171
++ + Y G ++ +++ M S SC+I
Sbjct: 660 MLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELS 719
Query: 172 -------VNGFS---KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
N FS +R Y + ++ ++ GC P TY I C++G A +
Sbjct: 720 DLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHR 779
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
+F M++KG Y+S++ + G +A+R + M
Sbjct: 780 LFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIM 819
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDM-------KEKGILEDPSVYASLICSFASIAEVKV 113
+M ++ S S A +L+ R M K K L ++ L+ F I E+K
Sbjct: 131 NMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMK- 189
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
++ E + + ++ +V Y + G V + V + A L++ ++
Sbjct: 190 --SVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLIL 247
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G+ + + AA ++ + ++GC+ +V+Y ++I+ +C +A K+F +M +
Sbjct: 248 GYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWP 307
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V Y+ ++ + GR +A+ + +M K C+PNV Y L+
Sbjct: 308 TVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + IL ++L K G L+ F +MK G D Y +LI + S+ ++ A +L
Sbjct: 297 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 356
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
K+ E G R + ++ ++ +E+ EV + M ++ + +++G K
Sbjct: 357 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 416
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ Q+IS+G P +TY SI+ YC+ G KA + M GF+ VV
Sbjct: 417 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 476
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
Y +++ K GR + A++++ M+ KG P YN ++ R N+R
Sbjct: 477 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 526
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ T +Y L + L + + + + +M +GI D + +L+ + +V+ A +
Sbjct: 52 ADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLM 111
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+E +G+ D F L+ ++EEG +E L V M + + V++NG+ K
Sbjct: 112 LEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 171
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A+ +Q I+ G P Q+TY + +N C+ A KV M Q+G D V
Sbjct: 172 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 231
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y+ +V K G++ +A ++ +M +GC P++ +N+L+
Sbjct: 232 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 271
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 113/236 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ + L K+G+ E M ++G L D + + +LI + + ++ A +L ++
Sbjct: 232 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 291
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ F L+ + G L + E MKN+ + +++
Sbjct: 292 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 351
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + + + S GC +TY +II+ C+ +AE+VF +M +G + + +++++
Sbjct: 352 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 411
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
K +I DA L+ +M +G +PN YNS++ + + ++++ ++A
Sbjct: 412 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 467
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 9/273 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ G+ D + ++ A K+GD LF E ++ TP Y
Sbjct: 281 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC--TPDEV-TY 337
Query: 64 KILCD---SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
L D SLGK G+A ++LK DM+ G Y ++I ++ AEE+F +
Sbjct: 338 NTLIDNLCSLGKLGKALDLLK---DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 394
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ +G+ R+ F L+ ++ ++ E++ M + L ++ I+ + K+
Sbjct: 395 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 454
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A + E + + G VTY ++IN C+ G A KV M+ KG AY+
Sbjct: 455 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 514
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
++ + IRDA+ L +M G P+ Y
Sbjct: 515 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 547
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L +L R E L R + KG+ D + LI + + + +A LF+E +
Sbjct: 267 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 326
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G D + L+ G + K L++++ M++ S I++G K+
Sbjct: 327 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 386
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +V++Q+ QG +T+ ++I+ C+ A ++ +M +G + Y+S++
Sbjct: 387 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 446
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y K G I+ A ++ M G E +V Y +L++
Sbjct: 447 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLIN 482
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 90 GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKT 149
GI D VY L+ +++K+ E ++ E +G+ D+ F L+ V
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108
Query: 150 LEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
+ ++E M + + + ++ GF + + AA++V +++ GC +VT +IN
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168
Query: 210 YCRIGLYSKAEKVFIEMQQK---GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
YC++G + E +QQ+ GF+ + Y++ V + + A++++ M +G
Sbjct: 169 YCKLG---RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 225
Query: 267 EPNVWIYN 274
+P+V+ YN
Sbjct: 226 DPDVFTYN 233
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 39/261 (14%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +E+MK++G D Y +++ +G K L + ES P ST Y +
Sbjct: 319 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG---CPRSTITYNTI 375
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K R E + F M +GI + + +LI ++ A EL + +G+
Sbjct: 376 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 435
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + ++ Y ++G ++K +++E+M + ++NG K A+K
Sbjct: 436 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 495
Query: 187 V-----------------------------------YEQLISQGCIPGQVTYASIINAYC 211
V + ++ G P +TY + C
Sbjct: 496 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 555
Query: 212 R-IGLYSKAEKVFIEMQQKGF 231
R G +A +EM KGF
Sbjct: 556 RGGGPIKEAFDFMLEMVDKGF 576
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 1/233 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L+P + + IL ++L K G ++ F +MK G D Y LI S+ ++ A
Sbjct: 403 LSPD-VYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNA 461
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+L E E G R + ++ ++ +E+ EV + M ++ S +++G
Sbjct: 462 LDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDG 521
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K + A ++ EQ++ +G P +TY SI+ YC+ G KA + M GF+
Sbjct: 522 LCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEID 581
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
VV Y +++ K GR + A++L+ M+ KG P YN ++ R NLR
Sbjct: 582 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLR 634
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 6/219 (2%)
Query: 60 THMYKILCDSLGKSGRAFEILK-FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
H+ +L + G ++L+ + +M +GI D +LI + +V+ A +
Sbjct: 166 NHLLNVLVE-----GSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLML 220
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E G+ D F L+ +IEEG +E L V M A + + V++NG+ K
Sbjct: 221 EEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKM 280
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A+ +Q I+ G P QVTY + ++ C+ G S A KV M Q+G D V Y
Sbjct: 281 GRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTY 340
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++++ K G + +A +V +M +GC P+ +N+L+
Sbjct: 341 NTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI 379
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 111/226 (49%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + L K+G E M ++G L D + + +LI + +S ++ A +L +E
Sbjct: 340 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELT 399
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ F L+ + G + + E MK++ + ++++
Sbjct: 400 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLG 459
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + ++ S GC VTY +II+A C+ +AE+VF +M +G + V +++++
Sbjct: 460 NALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLI 519
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
K RI DA L+ +M +G +PN YNS++ + + N+++
Sbjct: 520 DGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKK 565
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 9/273 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ G+ D + ++ A K+GD LF E +S TP Y
Sbjct: 389 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGC--TPDEV-TY 445
Query: 64 KILCD---SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
IL D S+GK G A ++L +M+ G Y ++I + ++ AEE+F +
Sbjct: 446 NILIDHLCSMGKLGNALDLLN---EMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQ 502
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ +G+ R F L+ + ++ E++E M L ++ I+ + K+
Sbjct: 503 MDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGN 562
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A + E + + G VTY ++IN C+ G A K+ M+ KG AY+
Sbjct: 563 IKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 622
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
++ + +RDA+ L +M G P+ Y
Sbjct: 623 VIQSLFRRNNLRDALNLFREMTEVGEPPDALTY 655
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 95/192 (49%), Gaps = 6/192 (3%)
Query: 90 GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKT 149
G+ D V+ L+ +++K+ E ++ E +G+ D+ L+ V
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216
Query: 150 LEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
+ ++E M + + + ++ GF + + AA++V +++ GC P VT +IN
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING 276
Query: 210 YCRIGLYSKAEKVFIEMQQK---GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
YC++G + E +QQ+ GF+ V Y++ V + G + A++++ M +G
Sbjct: 277 YCKMG---RVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH 333
Query: 267 EPNVWIYNSLMD 278
+P+V+ YN++++
Sbjct: 334 DPDVFTYNTVIN 345
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
T + L +L R E L R++ KG+ D + LI + + + + L
Sbjct: 370 PDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRL 429
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F+E + G D + L+ G + L+++ M++ S I++ K
Sbjct: 430 FEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCK 489
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A +V++Q+ +QG VT+ ++I+ C+ A ++ +M ++G +
Sbjct: 490 KMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNIT 549
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y+S++ Y K G I+ A ++ M G E +V Y +L++
Sbjct: 550 YNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLIN 590
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 130/294 (44%), Gaps = 5/294 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M S G+ D + +M+ F + G E AAL ++ + + +P+ + +L +
Sbjct: 221 EEMSSHGVAPDETTFTTLMQGFIEEGSIE--AALRVKAKMMEAGCSPTGVTV-NVLINGY 277
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR + L + + G D Y + + V A ++ ++G D+
Sbjct: 278 CKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDV 337
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAE-LNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + G +++ +V M + L + + +IV S + A+ +
Sbjct: 338 FTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV-ALSSQNRLEEALDLAR 396
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L +G P T+ +INA C++G ++F EM+ G V Y+ ++ G
Sbjct: 397 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMG 456
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
++ +A+ L+ +M+ GC + YN+++D + + + E+ + A ++R
Sbjct: 457 KLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISR 510
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 99/261 (37%), Gaps = 39/261 (14%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ +E+MKS+G D Y +++ +G L E ES P ST Y +
Sbjct: 427 IRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG---CPRSTVTYNTI 483
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+L K R E + F M +GI + +LI + A EL ++ ++G+
Sbjct: 484 IDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGL 543
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK--------- 177
+ + ++ Y ++G ++K +++E+M I ++NG K
Sbjct: 544 QPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALK 603
Query: 178 --------------------------RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
R A+ ++ ++ G P +TY + + C
Sbjct: 604 LLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLC 663
Query: 212 R-IGLYSKAEKVFIEMQQKGF 231
R G +A +EM KGF
Sbjct: 664 RGGGPIKEAFDFLVEMVNKGF 684
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 3/266 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G++ D Y I+ + G ++ + S D Y +L D L K
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS---DGVEPDVVTYSLLMDYLCK 313
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+GR E K F M ++G+ + + Y +L+ +A+ + L G+ D V
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F L+ Y ++G V++ + V M+ LN + ++ K A+ +EQ+I
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G PG + Y S+I+ C + +AE++ +EM +G + ++S++ + K GR+
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +L M G +PNV YN+L++
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLIN 519
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 123/275 (44%), Gaps = 5/275 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH + G D Y ++ F+K GDS+K + + E R + P Y +
Sbjct: 181 LHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGI--LPDVV-TYNSI 237
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+L K+ + ++ M + G++ D Y S++ + S + K A K+ G+
Sbjct: 238 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGV 297
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ + G + ++ +SM L ++ G++ + A
Sbjct: 298 EPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 357
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + ++ G P ++ +I AY + G +A VF +M+Q+G + V Y +++ +
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
K+GR+ DAM +M +G P +YNSL +HG
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSL--IHG 450
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 5/273 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M GI D + ++ A+ K G ++ +F + R+ L P++ Y + L K
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF--SKMRQQGLNPNAV-TYGAVIGILCK 418
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
SGR + + +F M ++G+ VY SLI + + + AEEL E ++G+ +
Sbjct: 419 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 478
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F ++ + +EG V ++ ++ E M + + ++NG+ A+K+ ++
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G P VTY+++IN YC+I A +F EM+ G ++ Y+ ++ +T R
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
A L ++ G + + YN + +HG KN
Sbjct: 599 AAKELYVRITESGTQIELSTYNII--LHGLCKN 629
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 125/283 (44%), Gaps = 24/283 (8%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ K LCD +S A E+L D + G D Y ++I F + A + E
Sbjct: 164 LLKGLCDE-NRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCIS-CVIVNGFSKRR 179
++G+L D+ + ++ + ++K +EV+ +M KN + DC++ I++G+
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM--PDCMTYNSILHGYCSSG 280
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+ +++ S G P VTY+ +++ C+ G +A K+F M ++G + Y
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+++ Y G + + L+ M G P+ ++++ L I AY
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL-------------------ICAY 381
Query: 300 NMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ D + +++ R G + G ++G+ K ++E+
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 424
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 108/270 (40%), Gaps = 3/270 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + Y+E+M G+ + Y ++ E+ L LE R + L +T +
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL---NTIFF 479
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ DS K GR E K F M G+ + Y +LI + ++ A +L
Sbjct: 480 NSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 539
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ + + L+ Y + +E L + + M+++ ++ +I+ G + R A
Sbjct: 540 VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 599
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++Y ++ G TY I++ C+ L A ++F + ++ M+
Sbjct: 600 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 659
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
K GR +A L G PN W Y
Sbjct: 660 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 178 RRAYWAAVKVYEQLISQGC---IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
R + AAV Y ++ G P TY +I CR G + +KGF
Sbjct: 62 RDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVD 121
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVA-KMKPKGCEPNVWIYNSLM 277
+A++ ++ R DAM +V +M GC PNV+ YN L+
Sbjct: 122 AIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILL 165
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 72/176 (40%), Gaps = 1/176 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L P+ T Y L + K R + L F++M+ G+ D Y ++ A
Sbjct: 542 LKPN-TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+EL+ E G +L + ++ + + + L++ +++ +L + ++++
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
K A ++ S G +P TY + GL + +++F+ M+ G
Sbjct: 661 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 11/258 (4%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCDSLGKSGRAFEILKF 82
Y I+ K G++ +F + E K D+ Y + DSL K + ++F
Sbjct: 196 YNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVV-----TYNTIIDSLCKDRLVNDAMEF 250
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
+M ++GI + Y ++ F + ++ A LFKE + ++ D LV +
Sbjct: 251 LSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCK 310
Query: 143 EGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
EGMV + V E+M K E NIS +++G+ +R A KV+E +I QGC PG
Sbjct: 311 EGMVSEARLVFETMTEKGVEPNIS--TYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
+Y +IN +C+ +A+ + EM K + V YS+++ + GR ++A+ + +
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKE 428
Query: 261 MKPKGCEPNVWIYNSLMD 278
M G PN+ Y+ L+D
Sbjct: 429 MCSYGLLPNLVTYSILLD 446
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y IL + KS R E +M K + D Y++L+ K A +FKE
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKE 428
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G+L +L + L+ + + G +++ L++++SM+ +L + +++ G
Sbjct: 429 MCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGK 488
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +++ +L + G P TY +I + GL +A +F +M+ GF +Y+
Sbjct: 489 LEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 548
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
M+ + + A+RL+ +M K N+ + L+D+ + + + Q
Sbjct: 549 MIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQDEIISQF 597
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 122/271 (45%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ + +M GI + Y ++ F +G + LF E R D+ P + + IL
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGR--DVMPDTVTL-TIL 304
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K G E F M EKG+ + S Y +L+ + + A+++F+ +G
Sbjct: 305 VDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGC 364
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + + +++ ++ M + LN ++ G + A+
Sbjct: 365 APGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALN 424
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++ S G +P VTY+ +++ +C+ G +A K+ MQ+K + +V ++ ++
Sbjct: 425 IFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMF 484
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G++ A L +K+ G P + Y ++
Sbjct: 485 IAGKLEVAKELFSKLFADGIRPTIRTYTVMI 515
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++NG AV+++ +++ +G P ++Y +IIN C+ G S A VF +M+Q G
Sbjct: 164 LINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNG 223
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
VV Y++++ K + DAM +++M +G PNV+ YN + +HG
Sbjct: 224 CKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCM--VHG 272
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 3/281 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
EKMKS GI D+ Y ++ + ++ A +F E ++ Y L D
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFS---HDKVTYNALLDVY 324
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GKS R E +K +M+ G Y SLI ++A + A EL + EKG D+
Sbjct: 325 GKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + G VE + + E M+NA + C + + R + +K++++
Sbjct: 385 FTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDE 444
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P VT+ +++ + + G+ S+ VF EM++ GF ++++++ Y + G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
AM + +M G P++ YN+++ R Q EK
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 545
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 161/355 (45%), Gaps = 19/355 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S ++ +E+M++AG + + ++ + G + +F E L+P +
Sbjct: 401 ESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINV--CGLSPDIV-TW 457
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L G++G E+ F++MK G + + + +LI +++ + A +++ +
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ DL + ++ GM E++ +V+ M++ ++ C +++ ++ +
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+ E++ S P V +++ + L +AE+ F E++++GF + +SMV+
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
+YG+ + A ++ MK +G P++ YNSLM MH R+ + + E+
Sbjct: 638 IYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y TVI AY + ++E R +G V D +G ++ S EE
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEE 752
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 17/276 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSST-HMYKI 65
Y +M AG+ D Y ++ A + G SEKV A + + +LT S H Y
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA- 570
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYAS---LICSFASIAEVKVAEELFKEAE 122
+G+ ++ + G++E +V L+CS + + AE F E +
Sbjct: 571 -------NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL--LPEAERAFSELK 621
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G D+ +V +Y MV K EV++ MK S ++ S+ +
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ ++ +++++G P ++Y ++I AYCR A ++F EM+ G V+ Y++ +
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFI 741
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y +A+ +V M GC PN YNS++D
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVD 777
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 36/253 (14%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
I+ LGK GR F ++E G D Y SLI +FA+ + A +FK+ EE+
Sbjct: 178 IVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEE 237
Query: 125 GMLRDLEVFLKLVLMYIEEG--------MVEK--------------TL------------ 150
G L + ++ ++ + G +VEK TL
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 151 --EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+V E MK A + +++ + K A+KV ++ G P VTY S+I+
Sbjct: 298 AAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLIS 357
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
AY R G+ +A ++ +M +KG V Y+++++ + + G++ AM + +M+ GC+P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKP 417
Query: 269 NVWIYNSLMDMHG 281
N+ +N+ + M+G
Sbjct: 418 NICTFNAFIKMYG 430
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 111/255 (43%), Gaps = 53/255 (20%)
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
K+ + + ML D V ++ M +EG V + ++ ++ +++ F+
Sbjct: 161 FMKQKDYQSML-DNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFA 219
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG---------------------- 214
Y AV V++++ +GC P +TY I+N + ++G
Sbjct: 220 NSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDA 279
Query: 215 --------------LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
L+ +A +VF EM+ GF V Y++++ +YGK+ R ++AM+++ +
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQ--------LEK--------YTTVISAYNMARE 304
M+ G P++ YNSL+ + R L + EK YTT++S + A +
Sbjct: 340 MELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 305 FDMCVKFYNEFRMNG 319
+ + + E R G
Sbjct: 400 VESAMNIFEEMRNAG 414
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+A E+L + MKE+G + Y SL+ + A+ +EE+ +E KG+ D+ +
Sbjct: 646 GKANEVLDY---MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISY 702
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLI 192
++ Y + + M+++ + + D I+ + ++ + A+ V +I
Sbjct: 703 NTVIYAYCRNTRMRDASRIFSEMRDSGI-VPDVITYNTFIGSYAADSMFEEAIGVVRYMI 761
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
GC P Q TY SI++ YC++ +A K+F+E
Sbjct: 762 KHGCRPNQNTYNSIVDGYCKLNRKDEA-KLFVE 793
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 14/206 (6%)
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
CD L ++ RAF ++KE+G D + S++ + V A E+ +E+G
Sbjct: 607 CDLLPEAERAFS------ELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGF 660
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAV 185
+ + L+ M+ K+ E++ + + D IS ++ + + A
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK-PDIISYNTVIYAYCRNTRMRDAS 719
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+++ ++ G +P +TY + I +Y ++ +A V M + G Y+S+V Y
Sbjct: 720 RIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Query: 246 GKTGRIRDAMRLVAKMK------PKG 265
K R +A V ++ PKG
Sbjct: 780 CKLNRKDEAKLFVEDLRNLDPHAPKG 805
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 135/277 (48%), Gaps = 9/277 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M G+ D Y ++ + G E LF E R +D Y L D+
Sbjct: 281 FEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGID---QDVFTYNTLLDA 337
Query: 70 LGKSGR---AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ K G+ A+EI+ +M K IL + Y+++ +A ++ A L+ E + G+
Sbjct: 338 VCKGGQMDLAYEIM---LEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGI 394
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ +Y + G E L+V + M ++ + +++G+ K+ + +
Sbjct: 395 GLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTR 454
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++++ P +TY+++I+ Y + LY +A +VF E +Q G VV YS ++
Sbjct: 455 VFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALC 514
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
K G + A+ L+ +M +G PNV YNS++D GR+
Sbjct: 515 KNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRS 551
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 156/342 (45%), Gaps = 29/342 (8%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIG-DSEKVAALFLECESRKLDLTPSSTHMY 63
SK H+ + KS+ S +++ + G D + + L ES+ + Y
Sbjct: 100 SKFHF-GRPKSSMTTRHSAIAEEVLHQVLQFGKDDASLDNILLNFESKL-----CGSEDY 153
Query: 64 KILCDSLGKSGRAFEILK--FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
L LG G ++ ++ F ++E E + +++I + + +V++A+ +F+ A
Sbjct: 154 TFLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETA 213
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA- 180
+G + F L+ Y + G ++ ++V ESMK + L + +++ K
Sbjct: 214 LSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVE 273
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ V+++E+++ G P ++TY S++ R GL+ A +F EM +G D+ V Y++
Sbjct: 274 FKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNT 333
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
++ K G++ A ++ +M K PNV Y+++ D + +A L
Sbjct: 334 LLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLED------------ 381
Query: 301 MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ YNE + G +DR ++ +++KL + E+
Sbjct: 382 -------ALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFED 416
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 130/263 (49%), Gaps = 8/263 (3%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE-ILKF 82
+ ++ A+ K G ++ +F ES K+ + Y + D+ GK G F+ +++
Sbjct: 224 AFSALISAYGKSGYFDEAIKVF---ESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEI 280
Query: 83 FRDMKEKGILEDPSVYASL--ICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
F +M G+ D Y SL +CS + E A LF E ++G+ +D+ + L+
Sbjct: 281 FEEMLRNGVQPDRITYNSLLAVCSRGGLWEA--ARNLFNEMIDRGIDQDVFTYNTLLDAV 338
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G ++ E++ M ++ + + +G++K A+ +Y ++ G +
Sbjct: 339 CKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDR 398
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
V+Y ++++ Y ++G + A KV EM G K VV Y++++ YGK G+ + R+ +
Sbjct: 399 VSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKE 458
Query: 261 MKPKGCEPNVWIYNSLMDMHGRA 283
MK PN+ Y++L+D++ +
Sbjct: 459 MKKDRVFPNLLTYSTLIDVYSKG 481
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 125/275 (45%), Gaps = 19/275 (6%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI--CSFASIAEVKVAEELFKE 120
+ L + GKSG E +K F MK G+ + Y ++I C + E K E+F+E
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGV-EFKRVVEIFEE 283
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G+ D + L+ + G+ E + M + ++ +++ K
Sbjct: 284 MLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A ++ ++ + +P VTY+++ + Y + G A ++ EM+ G V+Y++
Sbjct: 344 MDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNT 403
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--------- 291
++++Y K GR DA+++ +M G + +V YN+L+D +G+ ++ +
Sbjct: 404 LLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDR 463
Query: 292 -------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y+T+I Y+ ++ ++ + EF+ G
Sbjct: 464 VFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG 498
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 3/220 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKE-KGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D + K G L R M+E I+ + +Y+++I S A+ LF E
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+EKG+ DL + +++ + G ++++ M +++ ++N F K +
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ A ++Y++++ +G IP +TY S+I+ +C+ AE +F M KG V ++++
Sbjct: 342 FEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTL 401
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ Y RI D M L+ +M +G N YN+L +HG
Sbjct: 402 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL--IHG 439
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 148/360 (41%), Gaps = 30/360 (8%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ + +M+ GI D Y ++ F G L E RK+ +P Y L
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI--SPDVV-TYNALI 332
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++ K G+ FE + + +M +GI+ + Y S+I F + AE++F KG
Sbjct: 333 NAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS 392
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ F L+ Y ++ +E++ M L + +++GF AA+ +
Sbjct: 393 PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL 452
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ-----------KGFDKCVV 236
+Q+IS G P VT ++++ C G A ++F MQ+ G + V+
Sbjct: 453 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVL 512
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
Y+ ++ G+ +A L +M +G P+ Y+S++D + L + +
Sbjct: 513 TYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSM 572
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
+ T+I+ Y A D ++ + E G V D + ++ F K+ I
Sbjct: 573 GSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNI 632
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 142/333 (42%), Gaps = 22/333 (6%)
Query: 27 QIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRD 85
++ F++I E LF + SR L PS K++ + + R ++ ++
Sbjct: 49 KLQSGFHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLM-GVVVRMERPDLVISLYQK 104
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M+ K I D + LI F S +++ A F + + G+ D+ F L+ E
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
V + L+ M + ++NG + AV + ++++ G P Q+TY +
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 206 IINAYCRIGLYSKAEKVFIEMQQ-KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
I++ C+ G A + +M++ VV YS+++ K GR DA L +M+ K
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 265 GCEPNVWIYNSLMD---MHGRAKNLRQLEK-------------YTTVISAYNMAREFDMC 308
G P+++ YNS++ GR + QL + Y +I+A+ +F
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ Y+E G + + M+ F K +++
Sbjct: 345 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 377
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/314 (16%), Positives = 129/314 (41%), Gaps = 49/314 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M GI+ ++ Y +++ F K + +F ++ + L D
Sbjct: 348 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG---CSPDVFTFTTLIDG 404
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ R + ++ +M +G++ + Y +LI F + ++ A +L ++ G+ D
Sbjct: 405 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 464
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI----------SDCIS-CVIVNGFSKR 178
+ L+ + G ++ LE+ ++M+ +++++ D ++ +++ G
Sbjct: 465 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 524
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYAS--------------------------------- 205
+ A ++YE++ +G +P +TY+S
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 584
Query: 206 --IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+IN YC+ G ++F EM ++G + Y +++ + K G I A+ + +M
Sbjct: 585 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 644
Query: 264 KGCEPNVWIYNSLM 277
G P+ +++
Sbjct: 645 SGVYPDTITIRNML 658
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 13/225 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH-- 61
+ L ++M S+G+ D +++ G + +F + K+DL S
Sbjct: 447 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG 506
Query: 62 ------MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
Y IL L G+ E + + +M +GI+ D Y+S+I + + A
Sbjct: 507 VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
++F K ++ F L+ Y + G V+ LE+ M + I ++ GF
Sbjct: 567 QMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 626
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
K A+ +++++IS G P +T +++ G +SK E
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLT-----GFWSKEE 666
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 135/277 (48%), Gaps = 9/277 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M G+ D Y ++ + G E LF E R +D Y L D+
Sbjct: 281 FEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGID---QDVFTYNTLLDA 337
Query: 70 LGKSGR---AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ K G+ A+EI+ +M K IL + Y+++ +A ++ A L+ E + G+
Sbjct: 338 VCKGGQMDLAYEIM---LEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGI 394
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ +Y + G E L+V + M ++ + +++G+ K+ + +
Sbjct: 395 GLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTR 454
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++++ P +TY+++I+ Y + LY +A +VF E +Q G VV YS ++
Sbjct: 455 VFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALC 514
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
K G + A+ L+ +M +G PNV YNS++D GR+
Sbjct: 515 KNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRS 551
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 156/342 (45%), Gaps = 29/342 (8%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIG-DSEKVAALFLECESRKLDLTPSSTHMY 63
SK H+ + KS+ S +++ + G D + + L ES+ + Y
Sbjct: 100 SKFHF-GRPKSSMTTRHSAIAEEVLHQVLQFGKDDASLDNILLNFESKL-----CGSEDY 153
Query: 64 KILCDSLGKSGRAFEILK--FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
L LG G ++ ++ F ++E E + +++I + + +V++A+ +F+ A
Sbjct: 154 TFLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETA 213
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA- 180
+G + F L+ Y + G ++ ++V ESMK + L + +++ K
Sbjct: 214 LSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVE 273
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ V+++E+++ G P ++TY S++ R GL+ A +F EM +G D+ V Y++
Sbjct: 274 FKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNT 333
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
++ K G++ A ++ +M K PNV Y+++ D + +A L
Sbjct: 334 LLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLED------------ 381
Query: 301 MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ YNE + G +DR ++ +++KL + E+
Sbjct: 382 -------ALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFED 416
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 130/263 (49%), Gaps = 8/263 (3%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE-ILKF 82
+ ++ A+ K G ++ +F ES K+ + Y + D+ GK G F+ +++
Sbjct: 224 AFSALISAYGKSGYFDEAIKVF---ESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEI 280
Query: 83 FRDMKEKGILEDPSVYASL--ICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
F +M G+ D Y SL +CS + E A LF E ++G+ +D+ + L+
Sbjct: 281 FEEMLRNGVQPDRITYNSLLAVCSRGGLWEA--ARNLFNEMIDRGIDQDVFTYNTLLDAV 338
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G ++ E++ M ++ + + +G++K A+ +Y ++ G +
Sbjct: 339 CKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDR 398
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
V+Y ++++ Y ++G + A KV EM G K VV Y++++ YGK G+ + R+ +
Sbjct: 399 VSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKE 458
Query: 261 MKPKGCEPNVWIYNSLMDMHGRA 283
MK PN+ Y++L+D++ +
Sbjct: 459 MKKDRVFPNLLTYSTLIDVYSKG 481
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 125/275 (45%), Gaps = 19/275 (6%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI--CSFASIAEVKVAEELFKE 120
+ L + GKSG E +K F MK G+ + Y ++I C + E K E+F+E
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGV-EFKRVVEIFEE 283
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G+ D + L+ + G+ E + M + ++ +++ K
Sbjct: 284 MLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A ++ ++ + +P VTY+++ + Y + G A ++ EM+ G V+Y++
Sbjct: 344 MDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNT 403
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--------- 291
++++Y K GR DA+++ +M G + +V YN+L+D +G+ ++ +
Sbjct: 404 LLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDR 463
Query: 292 -------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y+T+I Y+ ++ ++ + EF+ G
Sbjct: 464 VFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG 498
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 3/266 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G++ D Y I+ + G ++ + S D Y +L D L K
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS---DGVEPDVVTYSLLMDYLCK 313
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+GR E K F M ++G+ + + Y +L+ +A+ + L G+ D V
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F L+ Y +G V++ + V M+ LN + ++ K A+ +EQ+I
Sbjct: 374 FSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G PG + Y S+I+ C + +AE++ +EM +G + ++S++ + K GR+
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +L M G +PNV YN+L++
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLIN 519
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 5/275 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH + G D Y ++ F+K GDS+K + + E R + P Y +
Sbjct: 181 LHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGI--LPDVV-TYNSI 237
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+L K+ + ++ M + G++ D Y S++ + S + K A K+ G+
Sbjct: 238 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGV 297
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ + G + ++ +SM L ++ G++ + A
Sbjct: 298 EPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 357
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + ++ G P ++ +I AY G +A VF +M+Q+G + V Y +++ +
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
K+GR+ DAM +M +G P +YNSL +HG
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSL--IHG 450
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 5/273 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M GI D + ++ A+ G ++ +F + R+ L P++ Y + L K
Sbjct: 362 MVRNGIHPDHYVFSILICAYANQGKVDQAMLVF--SKMRQQGLNPNAV-TYGAVIGILCK 418
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
SGR + + +F M ++G+ VY SLI + + + AEEL E ++G+ +
Sbjct: 419 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 478
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F ++ + +EG V ++ ++ E M + + ++NG+ A+K+ ++
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G P VTY+++IN YC+I A +F EM+ G ++ Y+ ++ +T R
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
A L ++ G + + YN + +HG KN
Sbjct: 599 AAKELYVRITESGTQIELSTYNII--LHGLCKN 629
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 125/283 (44%), Gaps = 24/283 (8%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ K LCD +S A E+L D + G D Y ++I F + A + E
Sbjct: 164 LLKGLCDE-NRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCIS-CVIVNGFSKRR 179
++G+L D+ + ++ + ++K +EV+ +M KN + DC++ I++G+
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM--PDCMTYNSILHGYCSSG 280
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+ +++ S G P VTY+ +++ C+ G +A K+F M ++G + Y
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+++ Y G + + L+ M G P+ ++++ L I AY
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL-------------------ICAY 381
Query: 300 NMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ D + +++ R G + G ++G+ K ++E+
Sbjct: 382 ANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 424
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 108/270 (40%), Gaps = 3/270 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + Y+E+M G+ + Y ++ E+ L LE R + L +T +
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL---NTIFF 479
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ DS K GR E K F M G+ + Y +LI + ++ A +L
Sbjct: 480 NSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 539
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ + + L+ Y + +E L + + M+++ ++ +I+ G + R A
Sbjct: 540 VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 599
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++Y ++ G TY I++ C+ L A ++F + ++ M+
Sbjct: 600 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 659
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
K GR +A L G PN W Y
Sbjct: 660 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 178 RRAYWAAVKVYEQLISQGC---IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
R + AAV Y ++ G P TY +I CR G + +KGF
Sbjct: 62 RDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVD 121
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVA-KMKPKGCEPNVWIYNSLM 277
+A++ ++ R DAM +V +M GC PNV+ YN L+
Sbjct: 122 AIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILL 165
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 72/176 (40%), Gaps = 1/176 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L P+ T Y L + K R + L F++M+ G+ D Y ++ A
Sbjct: 542 LKPN-TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+EL+ E G +L + ++ + + + L++ +++ +L + ++++
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
K A ++ S G +P TY + GL + +++F+ M+ G
Sbjct: 661 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M + G D Y I+ KIG++ A LF + E L + Y L S
Sbjct: 68 FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVT---YSTLIHS 124
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K R E L F MK K I Y SLI + + K A L E ++ +
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F LV + +EG V V+++M + ++ G+S A K+++
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I++GC P +Y+ +IN YC+ +A+++F EM +G V+Y++++ + G
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLG 304
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
R+R+A L M G PN++ Y L+D
Sbjct: 305 RLREAQDLFKNMHTNGNLPNLYTYAILLD 333
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 117/240 (48%), Gaps = 1/240 (0%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
KL L P+ + L + LGK G+ + ++ F DM +G D Y ++I I E
Sbjct: 38 KLGLQPTIV-TFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGET 96
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+A LFK+ EE G ++ + L+ + V + L++ MK +++ + +
Sbjct: 97 ALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSL 156
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ G + A + ++ S +P VT+ +++ +C+ G AE V M + G
Sbjct: 157 IQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGV 216
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ VV Y+S++ Y + +A +L M KGC+P+V+ Y+ L++ + +AK + + ++
Sbjct: 217 EPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQ 276
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 125/272 (45%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + MK+ I Y +++ ++ +AL E S L++ P+ + +L
Sbjct: 135 LDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS--LNIMPNVV-TFNVL 191
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K G+ + M E G+ D Y SL+ ++ EV A +LF KG
Sbjct: 192 VDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGC 251
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ Y + +++ ++ M + ++ +++G + A
Sbjct: 252 KPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQD 311
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ + + G +P TYA +++ +C+ G KA ++F MQ +V Y+ +V
Sbjct: 312 LFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMC 371
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+G ++DA L +++ G +PNV IY ++++
Sbjct: 372 KSGNLKDARELFSELFVIGLQPNVQIYTTIIN 403
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 94/203 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL + K+ R E + F +M +G + Y +LI + ++ A++LFK
Sbjct: 258 YSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMH 317
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G L +L + L+ + ++G + K + +M++ L + + ++VN K
Sbjct: 318 TNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLK 377
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +++ +L G P Y +IIN C+ GL +A + F M+ G +Y+ ++
Sbjct: 378 DARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVII 437
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ + A+ L+ +M+ +G
Sbjct: 438 RGFLQHKDESRAVHLIGEMRDRG 460
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 110/273 (40%), Gaps = 16/273 (5%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M+ G+ + LI F + V + + + + G+ + F L+ + G
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+ +E+ + M D I+NG K A +++++ GC VTY++
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+I++ C+ ++A +F M+ K + Y+S++ R ++A L+ +M
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 266 CEPNVWIYNSLMDM----------HGRAKNLRQLE------KYTTVISAYNMAREFDMCV 309
PNV +N L+D G K + ++ Y +++ Y+M E
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
K ++ G D I++ + K +I+E
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDE 273
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
MY + DSL K+G L F M+ GI D +Y SL+ + + A+ L +
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++ + D+ F L+ +++EG E+ M + + ++NGF
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++ + ++GC P V Y S+IN +C+ A K+F EM QKG + Y+++
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ +G+ G+ A + + M +G PN+ YN L+
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 10/260 (3%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
C+CQ + + +A+ FL + KL P + L + R E +
Sbjct: 116 CFCQSSQPY--------LASSFLG-KMMKLGFEPDIV-TFTSLINGFCLGNRMEEAMSMV 165
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
M E GI D +Y ++I S V A LF + E G+ D+ ++ LV
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G ++ M ++ +++ F K + A ++Y ++I P TY
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
S+IN +C G +A ++F M+ KG VVAY+S++ + K ++ DAM++ +M
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 264 KGCEPNVWIYNSLMDMHGRA 283
KG N Y +L+ G+
Sbjct: 346 KGLTGNTITYTTLIQGFGQV 365
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K + + +K F +M +KG+ + Y +LI F + + VA+E+F
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G+ ++ + L+ G V+K L + E M+ E++
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD-------------------- 419
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
G P TY +++ C G KA VF +M+++ D ++ Y+ ++
Sbjct: 420 ------------GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIII 467
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++++A+ L + KG +PNV Y +++
Sbjct: 468 QGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 38/285 (13%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++M++ GI D Y ++ G +L RK+ + L
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK---PDVITFNAL 253
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K G+ + + + +M I + Y SLI F V A ++F E KG
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ + + V+ +++ M L + ++ GF + A +
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+ ++S+G P TY +++ C G KA +F +MQ++ D
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD-------------- 419
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
G PN+W YN L +HG N +LEK
Sbjct: 420 ------------------GVAPNIWTYNVL--LHGLCYN-GKLEK 443
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 98/215 (45%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+L + +S + + F M + G D + SLI F ++ A + + E
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D+ ++ ++ + G V L + + M+N + + +VNG +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A + + + P +T+ ++I+A+ + G + AE+++ EM + + Y+S++
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ G + +A ++ M+ KGC P+V Y SL++
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 6/221 (2%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M++ G D Y ++ F K + +F E + L +T Y L G+
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT---GNTITYTTLIQGFGQ 364
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK---GMLRD 129
G+ + F M +G+ + Y L+ +VK A +F++ +++ G+ +
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ G +EK L V E M+ E++I +I+ G K AV ++
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
L S+G P VTY ++I+ R GL +A +F +M++ G
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 131/282 (46%), Gaps = 18/282 (6%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
AF ++ R +K + S Y LI + A + + A EL ++ ++ G + +F
Sbjct: 160 AFRVIGAMRHLKFRPPF---SAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTT 216
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
LV EG +E L +V+ +K + L + V ++ F K + A K + +L + G
Sbjct: 217 LVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHG 276
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
P V+Y S++ C+ G +AE++F +M+ + C AY++M+ YG R DA
Sbjct: 277 LRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAY 336
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ---------------LEKYTTVISAYN 300
+L+ +++ +GC P+V +NS++ G+ + + + + Y +I
Sbjct: 337 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLC 396
Query: 301 MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
MA + K +E + G + IMV K +Q+EE
Sbjct: 397 MAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEE 438
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 147/334 (44%), Gaps = 23/334 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILC 67
+EKM AG + Y ++ F+ G E ++ E R + DLT +T+M
Sbjct: 478 FEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYM----- 532
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D + K+G + F DMK G L D Y+ LI + + +F+ ++G
Sbjct: 533 DCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFA 592
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D + +V + G V+K EV+E MK ++ + IV+G +K A +
Sbjct: 593 LDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYML 652
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+E+ S+G + Y+S+I+ + ++G +A + EM +KG V ++S++ K
Sbjct: 653 FEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVK 712
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLEK--------- 291
T I +A+ MK C PN + Y+ L++ R + ++++K
Sbjct: 713 TEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVT 772
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
YTT+IS + F+ NGG+ D A
Sbjct: 773 YTTMISGLAKVGNITDAYSLFERFKTNGGIPDSA 806
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 170/401 (42%), Gaps = 78/401 (19%)
Query: 18 IVLDSGCYCQIMEAFYKIGDSEKVAALFLE-----------CESRKLD------------ 54
I++D C + YKI D ++A LF C++ +L+
Sbjct: 390 IIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASER 449
Query: 55 -LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
P+S Y L D LGK G+ + + F M + G +P +Y SLI +F +
Sbjct: 450 GCNPNSV-TYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKED 508
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIV 172
+++KE +G DL + + + G VEK + E MK+ + D S +++
Sbjct: 509 GHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGF-LPDVRSYSILI 567
Query: 173 NGFSKR----------------------RAYWAAV-------------KVYEQLISQGCI 197
+G +K RAY A V +V E++ +
Sbjct: 568 HGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVH 627
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P TY SI++ +I +A +F E + KG + V+ YSS++ +GK GRI +A +
Sbjct: 628 PTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLI 687
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRA----------KNLRQLE------KYTTVISAYNM 301
+ +M KG PNV+ +NSLMD + +++++++ Y+ +I+
Sbjct: 688 LEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCR 747
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++++ F+ E + G + + M+ +K+ I +
Sbjct: 748 VQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITD 788
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 134/288 (46%), Gaps = 3/288 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M G LD+ Y +++ K G +K + E + + + T ++ Y + D
Sbjct: 583 FQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVAT---YGSIVDG 639
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K R E F + K KGI + +Y+SLI F + + A + +E +KG+ +
Sbjct: 640 LAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 699
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ ++ +++ L +SMK + + + +++NG + + Y A ++
Sbjct: 700 VYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 759
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ QG IP VTY ++I+ ++G + A +F + G ++++++
Sbjct: 760 EMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNAN 819
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
R +A ++ + + +GC NV SL+D + + L Q V+S
Sbjct: 820 RPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIVGAVLS 867
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 146/361 (40%), Gaps = 30/361 (8%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
+ L +M+ G + + ++ A + G E AL E + L+ +
Sbjct: 192 PERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLE---PDIVL 248
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D GK+G KFF ++K G+ D Y S++ + AEELF + E
Sbjct: 249 YNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQME 308
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSK 177
+ RD+ M + G E+ + + ++ L CI V I+ K
Sbjct: 309 AE---RDVPCAYAYNTMIMGYGSAERFDDAYKLLE--RLRERGCIPSVVSFNSILTCLGK 363
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+R A+ +++ ++ + P TY II+ C G ++A K+ EM+ G +++
Sbjct: 364 KRKVDEALTLFD-VMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLS 422
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL----RQLEK-- 291
+ MV K ++ +A R+ +GC PN Y SL+D G+ + R EK
Sbjct: 423 VNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKML 482
Query: 292 ----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
YT++I + M + K Y E GG D + + K ++E
Sbjct: 483 DAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVE 542
Query: 342 E 342
+
Sbjct: 543 K 543
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 4/228 (1%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
PS IL LGK + E L F D+ +K + S Y +I V A +
Sbjct: 349 PSVVSFNSILT-CLGKKRKVDEALTLF-DVMKKDAKPNISTYNIIIDMLCMAGRVNEAYK 406
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ E E G+ +L +V + +E+ + ES N + C +++G
Sbjct: 407 IRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLG 466
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K+ A +++E+++ G + Y S+I + G K++ EM ++G +
Sbjct: 467 KKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLT 526
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
++ + K G + + MK G P+V Y+ L +HG K
Sbjct: 527 LLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSIL--IHGLTK 572
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 22/196 (11%)
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
+V+E M + + + +V + R A +V + P Y +I A
Sbjct: 127 KVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGAL 186
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+A ++ +MQ G++ V ++++V + G++ A+ LV ++K EP++
Sbjct: 187 AEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDI 246
Query: 271 WIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIM 330
+YN +D G+A ++ DM KF++E + +G D M
Sbjct: 247 VLYNVCIDCFGKAGSV-------------------DMAWKFFHELKAHGLRPDDVSYTSM 287
Query: 331 VGVFSK---LSQIEEL 343
V V K L + EEL
Sbjct: 288 VWVLCKAGRLGEAEEL 303
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 78/200 (39%), Gaps = 16/200 (8%)
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
LV + +E V+ +M++ + V++ ++ R A+++ Q+ G
Sbjct: 147 LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVG 206
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
+ +++ A R G A + E++ + +V Y+ + +GK G + A
Sbjct: 207 YEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAW 266
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAY 299
+ ++K G P+ Y S++ + +A L + E+ Y T+I Y
Sbjct: 267 KFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGY 326
Query: 300 NMAREFDMCVKFYNEFRMNG 319
A FD K R G
Sbjct: 327 GSAERFDDAYKLLERLRERG 346
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 129/276 (46%), Gaps = 4/276 (1%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
S+ ++ M + G D YC ++ + G + LF S K + + +
Sbjct: 386 SKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLF---NSMKSNGIAADCRV 442
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ IL + K G + + F +M+++G+ D Y+++I +F+ + + A E F +
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV 502
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
+G+ + V+ ++ + G + K E+V M N + D + ++N K
Sbjct: 503 ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRV 562
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++ + G P +T+ S+I+ YC +G KA K+ M+ G + +V YS++
Sbjct: 563 MDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTL 622
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ Y K GRI D + L +M+ KG +PN Y ++
Sbjct: 623 LDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIML 658
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 138/312 (44%), Gaps = 37/312 (11%)
Query: 3 SQSKLHYYEKMKSAGIVLDSG--CYCQIMEAFYKIGDSEKVAALFLE------------- 47
SQ L ++ M G Y ++ F+K G++ K +LF E
Sbjct: 244 SQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTY 303
Query: 48 -------CESRKLD--------LTPSS----THMYKILCDSLGKSGRAFEILKFFRDMKE 88
C++R +D +T + T Y + GR E K FR MK
Sbjct: 304 NLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKS 363
Query: 89 KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
+G++ + + S + S K A E+F KG D+ + L+ Y EG
Sbjct: 364 RGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFAD 423
Query: 149 TLEVVESMKNAELNISDC-ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ + SMK+ + +DC + ++++ ++KR A+ ++ ++ QG P VTY+++I
Sbjct: 424 MIGLFNSMKSNGI-AADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVI 482
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC- 266
+A+ R+G + A + F +M +G Y S++ + G + A LV++M KG
Sbjct: 483 SAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIP 542
Query: 267 EPNVWIYNSLMD 278
P++ +NS+++
Sbjct: 543 RPDIVFFNSVIN 554
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 111/275 (40%), Gaps = 9/275 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M + GI ++ Y I++ F G K L E ++ + P ++ +S
Sbjct: 498 FNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIP-RPDIVFFNSVI-NS 555
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K GR + F + + G D + SLI + + ++ A ++ E G+ D
Sbjct: 556 LCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETD 615
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y + G + L + M+ + + +++ G + AA K +
Sbjct: 616 IVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFH 675
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKT 248
++I G Y I+ CR +A +F ++ + ++M+ AMY K
Sbjct: 676 EMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMY-KV 734
Query: 249 GRIRDAMRLVAKMKPKGCEPN-----VWIYNSLMD 278
R +A L A + G PN V I N L D
Sbjct: 735 QRKEEAKELFATISASGLLPNESTYGVMIINLLKD 769
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 99/246 (40%), Gaps = 12/246 (4%)
Query: 19 VLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE 78
++D C M+ +KI D+ +V + + D+ Y L D K+GR +
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGV-------ETDIV-----TYSTLLDGYFKNGRIND 634
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
L FR+M+ KG+ + Y ++ A + F E E G + ++ ++
Sbjct: 635 GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILG 694
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
++ + + + + + S I ++N K + A +++ + + G +P
Sbjct: 695 GLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLP 754
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
+ TY +I + G A +F M++ G + ++ M + G I A +
Sbjct: 755 NESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL 814
Query: 259 AKMKPK 264
+K+ K
Sbjct: 815 SKVDGK 820
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M+S G ++ + I+ A K + K L+ E S TP + Y L D
Sbjct: 854 YSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCT---YGPLIDG 910
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+GR+ + +K F +M + G + +Y LI F E+ A ELFK+ ++G+ D
Sbjct: 911 LLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPD 970
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+ + LV G +++ ++ E +K L+ I+NG K R A+ ++
Sbjct: 971 LKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFS 1030
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ ++G P TY ++I G A K++ E+Q G + V Y++++ + +G
Sbjct: 1031 EMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSG 1090
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
A + KM GC PN + L + + RA
Sbjct: 1091 NKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRA 1124
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 129/307 (42%), Gaps = 44/307 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y KM+++ D Y +M+ F K+GD E V + E E +D Y IL ++
Sbjct: 328 YVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEME---VDGYAPDVVTYTILIEA 384
Query: 70 LGKSG---RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L KSG RAF++L M KGI + Y ++IC + A EL + E G+
Sbjct: 385 LCKSGDVDRAFDMLDV---MTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGV 441
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN-------------------------AEL 161
++ + Y + G K ++ E+MK AE
Sbjct: 442 KPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAED 501
Query: 162 NISDCISC----------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+D C +++ +SK A ++ ++IS+GC P + S+IN
Sbjct: 502 IFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLY 561
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ G A K+F ++ VV Y+ ++ GK G+I A+ L M GC PN
Sbjct: 562 KAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTI 621
Query: 272 IYNSLMD 278
+NSL+D
Sbjct: 622 TFNSLLD 628
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 137/305 (44%), Gaps = 20/305 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G D Y +++A G +K L+++ R +P Y L D
Sbjct: 293 FKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKM--RASSHSPDRV-TYITLMDK 349
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK G + +F+ +M+ G D Y LI + +V A ++ KG+ +
Sbjct: 350 FGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPN 409
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + ++ ++ +++ LE++E+M++ + + + ++ + K A+ +E
Sbjct: 410 LHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFE 469
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ +G +P + + G S+AE +F ++ + G V Y+ ++ Y K G
Sbjct: 470 TMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAG 529
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------------MHGRAKNLRQLEKYTTVI 296
+I A +L+++M KGCEP+V I NSL++ M GR KNL K +
Sbjct: 530 QIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNL----KLAPTV 585
Query: 297 SAYNM 301
YN+
Sbjct: 586 VTYNI 590
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 17/269 (6%)
Query: 91 ILEDPSVYASLICSFASIAEVKVAEELF-KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKT 149
+ +D V LI + A+ +F K + G+ LE + L+ + EK
Sbjct: 756 VCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKA 815
Query: 150 LEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
LE+ E MK+A + ++ ++++ K + +Y ++ S+GC P +T+ II+A
Sbjct: 816 LELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISA 875
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
+ +KA ++ E+ F Y ++ K GR AM++ +M GC PN
Sbjct: 876 LVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPN 935
Query: 270 VWIYNSLMDMHGRAKNL----------------RQLEKYTTVISAYNMAREFDMCVKFYN 313
IYN L++ G++ + L+ YT ++ + D V+++
Sbjct: 936 SVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFE 995
Query: 314 EFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
E ++ G D ++ K +++E
Sbjct: 996 ELKLTGLDPDTVSYNFIINGLGKSRRLDE 1024
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 122/284 (42%), Gaps = 11/284 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYK 64
L E M+S G+ + Y ++ + K GD K F + R + + + +Y
Sbjct: 430 LELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLY- 488
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+L ++GR E F D+ + G+ D Y L+ ++ ++ A +L E K
Sbjct: 489 ----TLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISK 544
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G D+ + L+ + G V+ ++ +KN +L + +++ G K A
Sbjct: 545 GCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKA 604
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++++ + GC P +T+ S+++ + A K+F M + V+ Y++++
Sbjct: 605 LELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYG 664
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKN 285
+ GRI A +MK K P+ +L+ HGR ++
Sbjct: 665 LIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVED 707
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLIC--SFASIAEVKVAE 115
S Y L +LG+ G +I+ +MK G+ P++Y IC + + A
Sbjct: 233 PSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGL--RPNIYTYTICIRALGRARRIDDAW 290
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+FKE +++G D+ + L+ G ++K E+ M+ + + +++ F
Sbjct: 291 GIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKF 350
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K + + ++ G P VTY +I A C+ G +A + M KG +
Sbjct: 351 GKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNL 410
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y++M+ K R+ +A+ L+ M+ G +P + Y +D +G++
Sbjct: 411 HTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKS 458
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 4/208 (1%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G GRA L R M E G + + Y LI A +++K +GM +
Sbjct: 180 GGIGRAPFAL---RKMTEVGFILNAYSYNGLI-HLLLPGFCNEALKVYKRMISEGMKPSM 235
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ + L++ G K + ++E MK+ L + + + + R A ++++
Sbjct: 236 KTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKE 295
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +GC P +TY +I+A C G KA++++++M+ V Y +++ +GK G
Sbjct: 296 MDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGD 355
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ R +M+ G P+V Y L++
Sbjct: 356 LETVKRFWNEMEVDGYAPDVVTYTILIE 383
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 8/227 (3%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSST 60
S+ + +E+M G +S Y ++ F K G+ + LF + E + DL
Sbjct: 917 SEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKS--- 973
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y IL + L +GR E +++F ++K G+ D Y +I + A LF E
Sbjct: 974 --YTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSE 1031
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ +G+ DL + L+L G V+ +++ E ++ L S ++ G S
Sbjct: 1032 MKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGN 1091
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL-YSKAEKVFIEM 226
A V+++++ GC P T+A + N Y R GL ++ VFI +
Sbjct: 1092 KDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPFGAVFIGL 1138
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 206 IINAYCRIGLY--------SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
I+NAY GL ++A KV+ M +G + YS+++ G+ G R M L
Sbjct: 198 ILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNL 257
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLE---------KYTTVISAYNM 301
+ +MK G PN++ Y + GRA+ + ++++ YT +I A
Sbjct: 258 LEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCA 317
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
A + D + Y + R + DR ++ F K+ +E +
Sbjct: 318 AGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETV 359
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 114/221 (51%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D++ K G+ + +M K I+ + Y+++I +A + A LF E +
Sbjct: 215 YNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMK 274
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ D + L+ +Y + G E+ L V + M+++ + ++ G+ K+ Y
Sbjct: 275 FASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYE 334
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+V+E++ ++ P +TY+++I+ Y + GLY +A +VF E ++ G VV YS+++
Sbjct: 335 EVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALI 394
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
K G + A+ + +M +G PNV YNS++D GR+
Sbjct: 395 DALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRS 435
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 3/249 (1%)
Query: 6 KLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKI 65
+++ + +M GI D Y +++A K G + A + E + + P+ Y
Sbjct: 196 EMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMD--LAFQIMSEMPRKHIMPNVV-TYST 252
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+ D K+GR E L F +MK I D Y +L+ +A + + A + KE E G
Sbjct: 253 VIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSG 312
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ +D + L+ Y ++G E+ V E MK + + +++ +SK Y A+
Sbjct: 313 IKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAM 372
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+V+ + G V Y+++I+A C+ GL A EM ++G VV Y+S++ +
Sbjct: 373 EVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAF 432
Query: 246 GKTGRIRDA 254
G++G + DA
Sbjct: 433 GRSGIVEDA 441
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 116/223 (52%), Gaps = 7/223 (3%)
Query: 63 YKILCDSLGKSG----RAFEI---LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
Y + D+ GK G RA EI + F +M +GI +D Y +L+ + ++ +A
Sbjct: 173 YNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAF 232
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
++ E K ++ ++ + ++ Y + G +++ L + MK A + + +++ +
Sbjct: 233 QIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIY 292
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+K + A+ V +++ S G VTY +++ Y + G Y + ++VF EM+ + +
Sbjct: 293 AKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNL 352
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ YS+++ +Y K G ++AM + + K G + +V +Y++L+D
Sbjct: 353 LTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALID 395
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/409 (19%), Positives = 160/409 (39%), Gaps = 86/409 (21%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ + +MK A I LD Y ++ + K+G E+ + E ES + Y L
Sbjct: 267 LNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIK---KDAVTYNAL 323
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
GK G+ E+ + F +MK + I + Y++LI ++ + A E+F+E ++ G+
Sbjct: 324 LGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGL 383
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA-- 184
D+ ++ L+ + G+VE + ++ M + + I++ F + A
Sbjct: 384 KADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATE 443
Query: 185 -----------VKVYEQLISQG---------------CI-------------PGQVTYAS 205
+K++ QL ++ CI P VT+++
Sbjct: 444 SEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSA 503
Query: 206 IINAYCRI---------------------------------GLYSKAEKVFIEMQQKGFD 232
I+NA R ++ +A+ +F E++Q
Sbjct: 504 ILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYGDNVWVQAQSLFDEVKQMDSS 563
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH----GRAKNLRQ 288
Y+++ M G+ R A +V + K + N+W NS +D+H G A+ +
Sbjct: 564 TASAFYNALTDMLWHFGQRRGAQLVVLEGKRRHVWENMW-SNSCLDLHLMSSGAARAMVH 622
Query: 289 ---LEKYTTVISAYNMAREFDMCVKFYNEFRMNG-GVIDRAMAGIMVGV 333
L + V + + + + + ++ G G + RA+ ++ G+
Sbjct: 623 AWLLNIRSIVFEGHELPQLLSILTGWGKHSKVVGDGALRRAIEALLTGM 671
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 26/155 (16%)
Query: 195 GCIPGQVTYASIINAYCRIGL-YSKAEKVFIEMQ------QKGFDKCVVAYSSMVAMYGK 247
G P VTY ++I+A + G+ +++A ++F EM +G ++ + Y++++ K
Sbjct: 165 GLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCK 224
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDM 307
G++ A +++++M K PNV Y+TVI Y A D
Sbjct: 225 GGQMDLAFQIMSEMPRKHIMPNV-------------------VTYSTVIDGYAKAGRLDE 265
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +NE + +DR ++ +++KL + EE
Sbjct: 266 ALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEE 300
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 39/271 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ Y I++ KIGD+ V+AL L + ++ + +Y + DSL
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKIGDT--VSALDLLRKMEEISHIIPNVVIYSAIIDSL 265
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR + F +M+EKGI D Y S+I F S AE+L +E E+ + D+
Sbjct: 266 CKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDV 325
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ NA ++N F K ++ A ++Y++
Sbjct: 326 VTY------------------------NA-----------LINAFVKEGKFFEAEELYDE 350
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ +G IP +TY+S+I+ +C+ AE +F M KG ++ +++++ Y R
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
I D M L+ +M G + YN+L +HG
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTL--IHG 439
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M GI+ ++ Y +++ F K + +F ++ +P+ + L D
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC--SPNLI-TFNTLIDG 404
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ R + ++ +M E G++ D + Y +LI F + ++ A +L +E G+ D
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDCISCV---------IVNGFSKR 178
+ L+ + G ++ LE+ + M+ + +L+ S + V +++G
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A ++YE++ +G +P +TY+S+I+ C+ +A ++F M K F VV +
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++++ Y K GR+ D + L +M +G N Y +L+
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 36/225 (16%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKE-KGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D + K G L R M+E I+ + +Y+++I S A+ LF E
Sbjct: 222 YGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+EKG+ DL + +++ GF +
Sbjct: 282 QEKGIFPDLFTYNSMIV-----------------------------------GFCSSGRW 306
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++ ++++ + P VTY ++INA+ + G + +AE+++ EM +G + YSSM
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM 366
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ + K R+ A + M KGC PN+ +N+L+D + AK +
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 144/333 (43%), Gaps = 22/333 (6%)
Query: 27 QIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRD 85
++ F++I E LF + SR L PS K++ + + R ++ ++
Sbjct: 49 KLQSGFHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLM-GVVVRMERPDLVISLYQK 104
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M+ K I D + LI F S +++ A F + + G+ D+ F L+ E
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDR 164
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
V + L + M + ++NG + AV + ++++ G P Q+TY +
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 206 IINAYCRIGLYSKAEKVFIEMQQ-KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
I++ C+IG A + +M++ VV YS+++ K GR DA L +M+ K
Sbjct: 225 IVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 265 GCEPNVWIYNSLMD---MHGRAKNLRQLEK-------------YTTVISAYNMAREFDMC 308
G P+++ YNS++ GR + QL + Y +I+A+ +F
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ Y+E G + + M+ F K ++++
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 126/322 (39%), Gaps = 49/322 (15%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ + +M+ GI D Y ++ F G L E RK+ +P Y L
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI--SPDVV-TYNALI 332
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++ K G+ FE + + +M +GI+ + Y+S+I F + AE +F KG
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+L F L+ Y ++ +E++ M L +++GF AA+ +
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 188 YEQLISQGCIPGQVTYASIINAYC------------------------------------ 211
+++IS G P VT ++++ C
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 212 ----------RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
G + +AE+++ EM +G + YSSM+ K R+ +A ++ M
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 262 KPKGCEPNVWIYNSLMDMHGRA 283
K PNV + +L++ + +A
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKA 594
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 47/281 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYK 64
+ +M G+V D+ Y ++ FY +GD L E S L D+ T +
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT-LLD 473
Query: 65 ILCDSLGKSGRAFEILKFFRDMKE--------KGILEDPSVYASLICSFASIAEVKVAEE 116
LCD+ GK A E+ K + K+ G+ D Y LI + + AEE
Sbjct: 474 GLCDN-GKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L++E +G++ D + + ++G
Sbjct: 533 LYEEMPHRGIVPDTITYSSM-----------------------------------IDGLC 557
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K+ A ++++ + S+ P VT+ ++IN YC+ G ++F EM ++G +
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y +++ + K G I A+ + +M G P+ +++
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 135/272 (49%), Gaps = 3/272 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M +AG+ ++ C ++EAF + G +++++ + ++ +TP+S + ++ +
Sbjct: 694 DNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLP--EMGITPNS-RTFVVIFHAF 750
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G E +R M+E G V+ +L+ ++ AEEL K+ ++ G+ D+
Sbjct: 751 SRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDM 810
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+++ ++ +Y + G K V + M+ + ++ +S+ + A + +
Sbjct: 811 DIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLRE 870
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I G P TY ++I+AY R+ Y AE VF + + G AY+ M+ +Y K G
Sbjct: 871 MIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGE 930
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
R ++ +MK G EP++ + LMD +G+
Sbjct: 931 HRKIEEVIEQMKADGFEPSLTTIHMLMDSYGK 962
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 144/288 (50%), Gaps = 15/288 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD------LTPSSTHMY 63
+ ++ G ++ Y ++ A+ + G+ E+ +R LD L P++
Sbjct: 658 FRDLQRHGFAGNTSAYSALLSAYAETGNFERA--------TRALDNMVAAGLQPNAACAN 709
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+L ++ G++G+A E+ +F++ + E GI + + + +F+ ++ A ++++ E
Sbjct: 710 YVL-EAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMRE 768
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G ++VF L+ +Y E + E+V+ +K A L + I +++ +SK +Y
Sbjct: 769 AGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRK 828
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A V++ + GC P T+ ++I Y R + +A+ + EM + G + Y+++++
Sbjct: 829 AALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLIS 888
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
YG+ DA + + GC+P+ YN +++++ +A R++E+
Sbjct: 889 AYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEE 936
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 133/280 (47%), Gaps = 9/280 (3%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+Y+++ GI +S + I AF + G+ E+ +++ + R+ +PS ++K L
Sbjct: 727 FYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQM--REAGFSPS-IQVFKALLA 783
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ + + +D+K+ G+ D +Y +I ++ + + A +FK +E G
Sbjct: 784 LYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSP 843
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESM---KNAELNISDCISCVIVNGFSKRRAYWAAV 185
D F L+++Y MV++ ++ M NA NIS + +++ + + +AY A
Sbjct: 844 DATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAP-NISTYTT--LISAYGRLQAYEDAE 900
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
V++ + GC P Y +IN Y + G + K E+V +M+ GF+ + ++ Y
Sbjct: 901 LVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSY 960
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
GK G A ++ + G P+ Y S+++ H K+
Sbjct: 961 GKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKD 1000
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 147/335 (43%), Gaps = 24/335 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ G D + +++A + G E +A+ L+ + L P T Y L +
Sbjct: 139 RMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQ-DVYAAGLRPD-TITYNTLISACS 196
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ R + + F +M+ +G D Y ++I + V+ A +F+ +E+G D
Sbjct: 197 LNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAV 256
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ ++ + +G +E+ + M++A + + +++ + K + A ++Y Q+
Sbjct: 257 TYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQM 316
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+G P VT+ +I+ + G ++A +F +M + + A+S+M+ Y K
Sbjct: 317 KEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMF 376
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
DA + M G P++ Y+ ++D+ +A+ EK C+
Sbjct: 377 SDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAE---MPEK----------------CIIL 417
Query: 312 YNEFRMNGGVIDRAMAGIMVGVF---SKLSQIEEL 343
Y +G + ++ IMV VF S L++IE L
Sbjct: 418 YKAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENL 452
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/370 (19%), Positives = 151/370 (40%), Gaps = 57/370 (15%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
++ ++ + G ++ A FL+ + L++ + ++C + G AF + D
Sbjct: 571 LVASYDRAGMQDEALARFLDMTTEGLEMD-AEVLQTAVMC--YCRKGFAFVAHELLIDCL 627
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
++D +++ ++I S+ + + AE +F++ + G + + L+ Y E G E
Sbjct: 628 HAFEVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFE 687
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ +++M A L + + ++ F + + Y++L G P T+ I
Sbjct: 688 RATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIF 747
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFD------KCVVA------------------------ 237
+A+ R G +A ++ +M++ GF K ++A
Sbjct: 748 HAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLE 807
Query: 238 -----YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK-------- 284
Y+ M+++Y K G R A + M+ GC P+ +N+L+ ++ R +
Sbjct: 808 LDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQAL 867
Query: 285 --------NLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
N + YTT+ISAY + ++ + G D +M+ V+ K
Sbjct: 868 LREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRK 927
Query: 337 LSQ---IEEL 343
+ IEE+
Sbjct: 928 AGEHRKIEEV 937
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 36/268 (13%)
Query: 55 LTPS-STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
+ PS + H+YK L L K+GR E + R + G + L+ S+
Sbjct: 524 IEPSVAAHLYKRLALMLAKAGRFSEAEEEMRTSQTYGQAQVSDFLKVLVASYDRAGMQDE 583
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A F + +G+ D EV V+ Y +G E+ + DC+ V
Sbjct: 584 ALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHEL----------LIDCLHAFEVK 633
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+ +II +Y ++ L+ AE VF ++Q+ GF
Sbjct: 634 D-------------------------SAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAG 668
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYT 293
AYS++++ Y +TG A R + M G +PN N +++ GRA ++L ++
Sbjct: 669 NTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFY 728
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGV 321
+ + V ++ F NG +
Sbjct: 729 QRLPEMGITPNSRTFVVIFHAFSRNGNL 756
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/284 (18%), Positives = 113/284 (39%), Gaps = 38/284 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M+ G D Y ++ + + G E +++F + + TP + Y + +
Sbjct: 208 FEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQ--GFTPDAV-TYNSVLHA 264
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ GR E+ + M++ D Y ++I + + AEEL+ + +E+G D
Sbjct: 265 FARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPD 324
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F L+ + G V + A ++E
Sbjct: 325 SVTFTVLIDTLGKAGFVNE-----------------------------------AAAMFE 349
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ P ++++I AY + ++S AE + M + G ++AYS M+ ++ K
Sbjct: 350 DMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAE 409
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYT 293
+ L M G +P + +Y ++ + + +L ++E +
Sbjct: 410 MPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENLS 453
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 180 AYWAAVKVYEQL-ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
++ A+++YE L +++ P A +++ R A+++F + + CV Y
Sbjct: 59 SWQRALELYECLNVARWYAPNPRMLAVMLSVLGRANQPGLAQELF-DRAESSIGNCVQVY 117
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR---------------- 282
+S++++Y + G +L+ +M+ +GC P++ +N ++ R
Sbjct: 118 NSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVY 177
Query: 283 AKNLRQLE-KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
A LR Y T+ISA ++ + + E + G D M+ V+ + ++E
Sbjct: 178 AAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVE 237
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 89/220 (40%), Gaps = 11/220 (5%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSS-THMYKILCD 68
M+ G D+ Y ++ AF + G + E++ + + ++T ++ HMY
Sbjct: 246 MQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMY----- 300
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
GK+G + + + MKE+G D + LI + V A +F++ + +
Sbjct: 301 --GKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRP 358
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
L+ F ++ Y + M M A + V+++ F K + +Y
Sbjct: 359 TLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILY 418
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+ ++ G P YA ++ + + ++ E + EM Q
Sbjct: 419 KAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENLSKEMVQ 458
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 6/285 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M + G D Y ++ K GD++ L + E KL+ +Y + D L
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLE---PGVLIYTTIIDGL 266
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+ + L F++M+ KGI + Y+SLI + A L + E+ + D+
Sbjct: 267 CKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +++EG + + ++ + M ++ S ++NGF A +++E
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++S+ C P V+Y+++I +C+ + ++F EM Q+G V Y++++ + G
Sbjct: 387 MVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGD 446
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
A + +M G PN+ YN+L+D G KN +LEK V
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLD--GLCKN-GKLEKAMVV 488
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 127/273 (46%), Gaps = 7/273 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ +++M++ GI + Y ++ G + L + RK++ + L
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN---PDVFTFSAL 332
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
D+ K G+ E K + +M ++ I DPS+ Y+SLI F + A+++F+ K
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSI--DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D+ + L+ + + V++ +E+ M L + ++ G + A
Sbjct: 391 HCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMA 450
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++++++S G P +TY ++++ C+ G KA VF +Q+ + + Y+ M+
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++ D L + KG +P+V YN+++
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 3/257 (1%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D + +++AF K G + L+ E R +D S Y L + R E
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID---PSIVTYSSLINGFCMHDRLDEAK 381
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ F M K D Y++LI F V ELF+E ++G++ + + L+
Sbjct: 382 QMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGL 441
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G + E+ + M + + + +++G K A+ V+E L P
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
TY +I C+ G +F + KG VVAY++M++ + + G +A L +
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 261 MKPKGCEPNVWIYNSLM 277
MK G PN YN+L+
Sbjct: 562 MKEDGTLPNSGCYNTLI 578
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 144/327 (44%), Gaps = 19/327 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M++ G+ + Y ++ F + S+ AL + + KL P+ + +L +
Sbjct: 105 EQMQNLGMPHNHYTYSILINCFCR--RSQLPLALAVLGKMMKLGYEPNIVTLSSLL-NGY 161
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
S R E + M G + + +LI + A L KG DL
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDL 221
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V + G + ++ M+ +L I I++G K + A+ ++++
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKE 281
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ ++G P VTY+S+I+ C G +S A ++ +M ++ + V +S+++ + K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL-------------EKYTT 294
+ +A +L +M + +P++ Y+SL++ MH R +Q+ Y+T
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYST 401
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGV 321
+I + A+ D ++ + E G V
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLV 428
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 97/203 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L K+ R E ++ FR+M ++G++ + Y +LI + +A+E+FKE
Sbjct: 399 YSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV 458
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ ++ + L+ + G +EK + V E ++ +++ + +++ G K
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ L +G P V Y ++I+ +CR G +A+ +F EM++ G Y++++
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ G + L+ +M+ G
Sbjct: 579 RARLRDGDREASAELIKEMRSCG 601
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 101/232 (43%), Gaps = 22/232 (9%)
Query: 108 IAEVKV--AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD 165
++E+K+ A LF E + + F KL+ + + + + E M+N + +
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNH 116
Query: 166 CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
+++N F +R A+ V +++ G P VT +S++N YC S+A + +
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 226 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
M G+ V +++++ + +A+ L+ +M KGC+P++ Y +++ G K
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVN--GLCKR 234
Query: 286 ---------LRQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
L ++E+ YTT+I + D + + E G
Sbjct: 235 GDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKG 286
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S G+ + Y +++ K G EK +F + K++ T + Y I+ +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT---IYTYNIMIEG 510
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K+G+ + F ++ KG+ D Y ++I F + A+ LFKE +E G L +
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+ L+ + +G E + E+++ M++
Sbjct: 571 SGCYNTLIRARLRDGDREASAELIKEMRS 599
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + IL ++L K G L+ F +MK G D Y +LI + S+ ++ A +L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
K+ E G R + ++ ++ +E+ EV + M ++ + +++G K
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 508
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ Q+IS+G P +TY SI+ YC+ G KA + M GF+ VV
Sbjct: 509 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
Y +++ K GR + A++++ M+ KG P YN ++ R N+R
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ T +Y L + L + + + + +M +GI D + +L+ + +V+ A +
Sbjct: 144 ADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIM 203
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+E +G+ D F L+ ++EEG +E L V M + + V++NG+ K
Sbjct: 204 LEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 263
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A+ +Q I+ G P Q+TY + +N C+ A KV M Q+G D V
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y+ +V K G++ +A ++ +M +GC P++ +N+L+
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 113/236 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ + L K+G+ E M ++G L D + + +LI + + ++ A +L ++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ F L+ + G L + E MKN+ + +++
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + + + S GC +TY +II+ C+ +AE+VF +M +G + + +++++
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
K +I DA L+ +M +G +PN YNS++ + + ++++ ++A
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 9/273 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ G+ D + ++ A K+GD LF E ++ TP Y
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC--TPDEV-TY 429
Query: 64 KILCD---SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
L D SLGK G+A ++LK DM+ G Y ++I ++ AEE+F +
Sbjct: 430 NTLIDNLCSLGKLGKALDLLK---DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ +G+ R+ F L+ ++ ++ E++ M + L ++ I+ + K+
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A + E + + G VTY ++IN C+ G A KV M+ KG AY+
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
++ + IRDA+ L +M G P+ Y
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 639
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L +L R E L R + KG+ D + LI + + + +A LF+E +
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G D + L+ G + K L++++ M++ S I++G K+
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +V++Q+ QG +T+ ++I+ C+ A ++ +M +G + Y+S++
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y K G I+ A ++ M G E +V Y +L++
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLIN 574
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 90 GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKT 149
GI D VY L+ +++K+ E ++ E +G+ D+ F L+ V
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 150 LEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
+ ++E M + + + ++ GF + + AA++V +++ GC +VT +IN
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Query: 210 YCRIGLYSKAEKVFIEMQQK---GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
YC++G + E +QQ+ GF+ + Y++ V + + A++++ M +G
Sbjct: 261 YCKLG---RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Query: 267 EPNVWIYN 274
+P+V+ YN
Sbjct: 318 DPDVFTYN 325
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 39/261 (14%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +E+MK++G D Y +++ +G K L + ES P ST Y +
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG---CPRSTITYNTI 467
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K R E + F M +GI + + +LI ++ A EL + +G+
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + ++ Y ++G ++K +++E+M + ++NG K A+K
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587
Query: 187 V-----------------------------------YEQLISQGCIPGQVTYASIINAYC 211
V + ++ G P +TY + C
Sbjct: 588 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 647
Query: 212 R-IGLYSKAEKVFIEMQQKGF 231
R G +A +EM KGF
Sbjct: 648 RGGGPIKEAFDFMLEMVDKGF 668
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + IL ++L K G L+ F +MK G D Y +LI + S+ ++ A +L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
K+ E G R + ++ ++ +E+ EV + M ++ + +++G K
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 508
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ Q+IS+G P +TY SI+ YC+ G KA + M GF+ VV
Sbjct: 509 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
Y +++ K GR + A++++ M+ KG P YN ++ R N+R
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ T +Y L + L + + + + +M +GI D + +L+ + +V+ A +
Sbjct: 144 ADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLM 203
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+E +G+ D F L+ ++EEG +E L V M + + V++NG+ K
Sbjct: 204 LEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 263
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A+ +Q I+ G P Q+TY + +N C+ A KV M Q+G D V
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y+ +V K G++ +A ++ +M +GC P++ +N+L+
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 113/236 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ + L K+G+ E M ++G L D + + +LI + + ++ A +L ++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ F L+ + G L + E MKN+ + +++
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + + + S GC +TY +II+ C+ +AE+VF +M +G + + +++++
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
K +I DA L+ +M +G +PN YNS++ + + ++++ ++A
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 9/273 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ G+ D + ++ A K+GD LF E ++ TP Y
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC--TPDEV-TY 429
Query: 64 KILCD---SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
L D SLGK G+A ++LK DM+ G Y ++I ++ AEE+F +
Sbjct: 430 NTLIDNLCSLGKLGKALDLLK---DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ +G+ R+ F L+ ++ ++ E++ M + L ++ I+ + K+
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A + E + + G VTY ++IN C+ G A KV M+ KG AY+
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
++ + IRDA+ L +M G P+ Y
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 639
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L +L R E L R + KG+ D + LI + + + +A LF+E +
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G D + L+ G + K L++++ M++ S I++G K+
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +V++Q+ QG +T+ ++I+ C+ A ++ +M +G + Y+S++
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y K G I+ A ++ M G E +V Y +L++
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLIN 574
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 90 GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKT 149
GI D VY L+ +++K+ E ++ E +G+ D+ F L+ V
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 150 LEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
+ ++E M + + + ++ GF + + AA++V +++ GC +VT +IN
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Query: 210 YCRIGLYSKAEKVFIEMQQK---GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
YC++G + E +QQ+ GF+ + Y++ V + + A++++ M +G
Sbjct: 261 YCKLG---RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Query: 267 EPNVWIYN 274
+P+V+ YN
Sbjct: 318 DPDVFTYN 325
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 39/261 (14%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +E+MK++G D Y +++ +G K L + ES P ST Y +
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG---CPRSTITYNTI 467
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K R E + F M +GI + + +LI ++ A EL + +G+
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + ++ Y ++G ++K +++E+M + ++NG K A+K
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587
Query: 187 V-----------------------------------YEQLISQGCIPGQVTYASIINAYC 211
V + ++ G P +TY + C
Sbjct: 588 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 647
Query: 212 R-IGLYSKAEKVFIEMQQKGF 231
R G +A +EM KGF
Sbjct: 648 RGGGPIKEAFDFMLEMVDKGF 668
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 130/273 (47%), Gaps = 5/273 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY-KILCD 68
+ +M+ A V + + ++ + G EK LF++ + R P + + + +L D
Sbjct: 127 FNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLED 186
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ K R E L FRD+++ + Y +I + E AE L++
Sbjct: 187 A--KEYRRAEAL--FRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPP 242
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ F L+ + +G+ + + ++ + ++ +S+ + A++++
Sbjct: 243 NICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIF 302
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ + GC P V++ +INAY R GLY AEK+F MQ GF + + +++ Y +
Sbjct: 303 QTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARA 362
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
GR+ +A LV+ M+ G +P+ IYNSL++ +G
Sbjct: 363 GRVEEAEELVSAMERDGTKPDTLIYNSLINAYG 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 138/307 (44%), Gaps = 26/307 (8%)
Query: 21 DSGCYCQIMEAFYK---IGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAF 77
D GCY +++A+ K I D+EK E L + + +L + +G
Sbjct: 103 DLGCYNLLIDAYGKSLNIEDAEKTFNRMQEA------LCVPNEETFGVLINGYRLAGSFE 156
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
+ + F M+++G P + + E + AE LF++ E+ +++ + +++
Sbjct: 157 KAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMI 216
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
++Y + G K + SM+ A + C ++N F+++ Y A + +++L
Sbjct: 217 VIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYK 276
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P Y +++ AY + G + A ++F MQ+ G V+++ ++ YG+ G DA ++
Sbjct: 277 PDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKI 336
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNM 301
M+ G PN+ L+ + RA + + E+ Y ++I+AY +
Sbjct: 337 FKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGV 396
Query: 302 A-REFDM 307
+ R DM
Sbjct: 397 SGRHEDM 403
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 3/281 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
EKMKS GI D+ Y ++ + ++ A +F E ++ + Y L D
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVT---YNALLDVY 324
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GKS R E +K +M G Y SLI ++A + A EL + EKG D+
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + G VE + + E M+NA + C + + R + +K++++
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P VT+ +++ + + G+ S+ VF EM++ GF ++++++ Y + G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
AM + +M G P++ YN+++ R Q EK
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 545
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 161/355 (45%), Gaps = 19/355 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S + +E+M++AG + + ++ + G ++ +F E L+P +
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV--CGLSPDIV-TW 457
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L G++G E+ F++MK G + + + +LI +++ + A +++ +
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ DL + ++ GM E++ +V+ M++ ++ C +++ ++ +
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+ E++ S P V +++ + L +AE+ F E++++GF + +SMV+
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
+YG+ + A ++ MK +G P++ YNSLM MH R+ + + E+
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y TVI AY + ++E R +G V D +G ++ S EE
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEE 752
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 134/301 (44%), Gaps = 38/301 (12%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
I+ LGK GR F ++E G D Y SLI +FA+ + A +FK+ EE
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 125 GMLRDLEVFLKLVLMYIEEG--------MVEK--------------TL------------ 150
G L + ++ ++ + G +VEK TL
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 151 --EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+V E MK A + +++ + K A+KV +++ G P VTY S+I+
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
AY R G+ +A ++ +M +KG V Y+++++ + + G++ AM + +M+ GC+P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 269 NVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAG 328
N+ +N+ + M+G ++ K I+ ++ + F NG +D ++G
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG--MDSEVSG 475
Query: 329 I 329
+
Sbjct: 476 V 476
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 17/276 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSST-HMYKI 65
Y +M AG+ D Y ++ A + G SEKV A + + +LT S H Y
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA- 570
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYAS---LICSFASIAEVKVAEELFKEAE 122
+G+ ++ + G++E +V L+CS + + AE F E +
Sbjct: 571 -------NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL--LPEAERAFSELK 621
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G D+ +V +Y MV K V++ MK S ++ S+ +
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ ++ +++++G P ++Y ++I AYCR A ++F EM+ G V+ Y++ +
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y +A+ +V M GC PN YNS++D
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVD 777
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
MKE+G + Y SL+ + A+ +EE+ +E KG+ D+ + ++ Y
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 146 VEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ + M+N+ + + D I+ + ++ + A+ V +I GC P Q TY
Sbjct: 715 MRDASRIFSEMRNSGI-VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYN 773
Query: 205 SIINAYCRIGLYSKAEKVFIE 225
SI++ YC++ +A K+F+E
Sbjct: 774 SIVDGYCKLNRKDEA-KLFVE 793
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 20/243 (8%)
Query: 97 VYASLI-CSFASIAEVKVAEELFKEAEEK--GMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
V SLI +F S V ELF+ ++K +L FLK + + + + + +
Sbjct: 102 VLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWF 161
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
K+ + + + + +I++ K +A ++ L G +Y S+I+A+
Sbjct: 162 MKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANS 221
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM-RLVAKMKPKGCEPNVWI 272
G Y +A VF +M++ G ++ Y+ ++ ++GK G + + LV KMK G P+ +
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYT 281
Query: 273 YNSLM------DMHGRAKNLRQLEK----------YTTVISAYNMAREFDMCVKFYNEFR 316
YN+L+ +H A + + K Y ++ Y + +K NE
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 317 MNG 319
+NG
Sbjct: 342 LNG 344
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 14/206 (6%)
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
CD L ++ RAF ++KE+G D + S++ + V A + +E+G
Sbjct: 607 CDLLPEAERAFS------ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF 660
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAV 185
+ + L+ M+ K+ E++ + + D IS ++ + + A
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK-PDIISYNTVIYAYCRNTRMRDAS 719
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+++ ++ + G +P +TY + I +Y ++ +A V M + G Y+S+V Y
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Query: 246 GKTGRIRDAMRLVAKMK------PKG 265
K R +A V ++ PKG
Sbjct: 780 CKLNRKDEAKLFVEDLRNLDPHAPKG 805
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 5/289 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S L E M G D + ++ K D + A FL+ +R + SS Y
Sbjct: 67 SALSLLETMIKRGYCPDMATHSMLINELCK-ADKIQEAQEFLQGMNRTISTRASSCFSYN 125
Query: 65 ILCDSLGKSGRAFEILKFFRDM-KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L +SL K+ + + F M E+ ++ D Y+ LI F I E+ AE+L+K+ +
Sbjct: 126 SLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 185
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ ++ + + + +G + V E M +A + +++GFS R +
Sbjct: 186 LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQ 245
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +++E +IS+GC P VTY +++ C+ +A ++F +M ++G D V Y++++
Sbjct: 246 AHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLY 305
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
+ G+I A+ + +M KG +P+V YN L+ G+ RQL
Sbjct: 306 GFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQL 354
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 5/239 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M SAG D Y ++ F ++ LF SR P++ Y L
Sbjct: 215 YEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISR--GCRPNAV-TYNCLLHG 271
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K + E + FR M E+G D Y +L+ F ++ +++ A E+F E KG D
Sbjct: 272 LCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD 331
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G + ++ + M + E ++++G SK + AV+V+E
Sbjct: 332 VVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFE 391
Query: 190 QL-ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYG 246
++ GC P VTY S+I C S+A KVF E+ + A++ ++ AMY
Sbjct: 392 RMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYA 450
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 10/264 (3%)
Query: 18 IVLDSGCYCQIMEAFYKI---GDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
+V D Y +++ F KI G +EK+ ++ L+ P+ T Y + L + G
Sbjct: 153 VVPDVVSYSILIDGFCKIDELGRAEKLYKQMID-----LNCVPNVT-TYNAFLNGLMRKG 206
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
R + + +M G D Y++LI F+ + A ELF+ +G + +
Sbjct: 207 RIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYN 266
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ +E ++ E+ M + ++ GF AV+V+++++S+
Sbjct: 267 CLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSK 326
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G P V Y ++ + R G +A ++F M + V+++ M+ K R+ DA
Sbjct: 327 GHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDA 386
Query: 255 MRLVAKM-KPKGCEPNVWIYNSLM 277
+ + +M + GC P++ YNSL+
Sbjct: 387 VEVFERMEQDHGCSPDLVTYNSLI 410
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MKS I D Y ++ K+ K L +E E +D S + L D+
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD---PSVETFNTLIDA 448
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G +G+ + DM++KGI D + S++ +F ++ A + + K + +
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 508
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+V+ ++ YIE G E+ L +VE MKN+ ++ S +++ G + A ++
Sbjct: 509 AQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 568
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L +QG P V+Y +II+A C G KA ++ EM + G + ++V+ G
Sbjct: 569 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAG 628
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
R+ D L +M K EP+ IY ++D + R +N
Sbjct: 629 RVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 664
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 135/317 (42%), Gaps = 38/317 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++M G+ + Y +++ K GD E A F + D + Y +L
Sbjct: 214 LKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLE---AGFRLRDQMLHDGPKPNVVTYNVL 270
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L ++GR E +M +L D Y+ L E + LF E+ +KG+
Sbjct: 271 LSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGV 330
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ L+ ++G V K +V E + + L + I ++NG+ + R A
Sbjct: 331 MLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFC 390
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++EQ+ S+ P +TY ++IN C++ + +KAE + +EM++ G D V +++++ YG
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450
Query: 247 KTGRIRDAMRLVAKMKPKGCE-----------------------------------PNVW 271
G++ +++ M+ KG + PN
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510
Query: 272 IYNSLMDMHGRAKNLRQ 288
+YNS++D + + + Q
Sbjct: 511 VYNSIIDAYIESGDTEQ 527
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 150/344 (43%), Gaps = 17/344 (4%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
+AG D+ + ++++A GD + VA L R P Y ++ L +SG
Sbjct: 150 AAGARPDTFAWNKVVQACVAAGDLD-VALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSG 208
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+ + LK F +M + G+ + Y ++I +++ L + G ++ +
Sbjct: 209 KGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYN 268
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ G +++T +++ M + + ++ +G ++ + ++ + + +
Sbjct: 269 VLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKK 328
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G + G T + ++N C+ G +KA++VF + G V Y++++ Y + +R A
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGA 388
Query: 255 MRLVAKMKPKGCEPNVWIYNSL------MDMHGRAKNL----------RQLEKYTTVISA 298
+ +MK + P+ YN+L ++M +A++L +E + T+I A
Sbjct: 389 FCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDA 448
Query: 299 YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y A + + C ++ + G D G +V F K +I E
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 492
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 139/325 (42%), Gaps = 19/325 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M S ++ D Y + + + G+S+ + +LF E + + L + IL + L
Sbjct: 288 DEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVML---GAYTCSILLNGL 344
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G+ + + F + G++ +Y +LI + + +++ A +F++ + + + D
Sbjct: 345 CKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDH 404
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + MV K ++V M+ + ++ S +++ + V
Sbjct: 405 ITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD 464
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G +++ S++ A+C+ G +A + +M K Y+S++ Y ++G
Sbjct: 465 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 524
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
A+ LV KMK G ++ YN L+ R+ + + E+ Y T
Sbjct: 525 TEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 584
Query: 295 VISAYNMAREFDMCVKFYNEFRMNG 319
+ISA + D ++ E G
Sbjct: 585 IISACCNKGDTDKALELLQEMNKYG 609
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ GI D + +++AF K G + A+ + + D+ P++ +Y + D+ +
Sbjct: 465 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK--DVAPNA-QVYNSIIDAYIE 521
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
SG + L MK G+ Y L+ +++ AEEL +G+ D+
Sbjct: 522 SGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVS 581
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ +G +K LE+++ M + + +V+ + +Y+Q++
Sbjct: 582 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQML 641
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ P Y +++AY R SK + EM +KG
Sbjct: 642 HKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 141/322 (43%), Gaps = 43/322 (13%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH+++K+ + G L+ Y ++ KIGD+ L + + R LT + MY +
Sbjct: 149 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGR---LTKPNVVMYSTI 205
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+L K E F +M KGI D Y++LI F ++K A L E K +
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTI 265
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS------------------ 168
++ + LV +EG V++ V+ M A + D I+
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK-PDVITYSTLMDGYFLVYEVKKAQ 324
Query: 169 ------------------CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
+++NGF K + A+ +++++ + +PG VTY+S+I+
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
C+ G + EM +G V+ YSS++ K G + A+ L KMK +G PN
Sbjct: 385 CKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNT 444
Query: 271 WIYNSLMD---MHGRAKNLRQL 289
+ + L+D GR K+ +++
Sbjct: 445 FTFTILLDGLCKGGRLKDAQEV 466
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 129/303 (42%), Gaps = 17/303 (5%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP KIL DS K + ++ KGI D LI F + ++
Sbjct: 56 TPPIIQFNKIL-DSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ + ++G D L+ +G V+K L + + ++ ++NG
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGV 174
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K AA+K+ +++ + P V Y++II+A C+ L S+A +F EM KG V
Sbjct: 175 CKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQLE-- 290
V YS+++ + G++++A+ L+ +M K PNV+ YN L+D G+ K + +
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 291 -----------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
Y+T++ Y + E +N + G D I++ F K
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354
Query: 340 IEE 342
++E
Sbjct: 355 VDE 357
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 89 KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
KGI D LI F + ++ + + ++G D F L+ +G V K
Sbjct: 955 KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
L + + ++ ++NG K AA+K+ ++ + P V Y +II+
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
A C+ L SKA +F EM KG VV Y++++ + G++++A+ L+ KM K P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134
Query: 269 NVWIYNSLMD 278
NV YN L+D
Sbjct: 1135 NVRTYNILVD 1144
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 88/191 (46%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F M G+ D Y LI F V A LFKE +K M+ + + L+ +
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G + ++++ M + + +++G K A+ ++ ++ QG P T
Sbjct: 387 SGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFT 446
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
+ +++ C+ G A++VF ++ KG+ V Y+ M+ + K G + +A+ +++KM+
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKME 506
Query: 263 PKGCEPNVWIY 273
GC P+ +
Sbjct: 507 DNGCIPDAVTF 517
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 95/206 (46%), Gaps = 3/206 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +M+ ++ + + +K +F + +TP H Y IL + K+ E L F+
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVF--NAMSLMGVTPD-VHTYTILINGFCKNKMVDEALNLFK 363
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M +K ++ Y+SLI + +L E ++G ++ + L+ + G
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNG 423
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ + + MK+ + + ++++G K A +V++ L+++G TY
Sbjct: 424 HLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYN 483
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKG 230
+I+ +C+ GL +A + +M+ G
Sbjct: 484 VMIDGHCKQGLLEEALTMLSKMEDNG 509
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 12/228 (5%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H + M G+ D Y ++ F K ++ LF E + ++ P Y L
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQK--NMVPGIV-TYSSLI 381
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D L KSGR + +M ++G + Y+SLI + A LF + +++G+
Sbjct: 382 DGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIR 441
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ F L+ + G ++ EV + + +++ V+++G K+ A+ +
Sbjct: 442 PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTM 501
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
++ GCIP VT+ II I L+ K E GFDK V
Sbjct: 502 LSKMEDNGCIPDAVTFEIII-----IALFKKDE----NGGNVGFDKKV 540
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 89/193 (46%), Gaps = 5/193 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH+++K+ + G L+ Y ++ KIGD+ L + + R LT MY +
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGR---LTKPDVVMYNTI 1072
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+L K + F +M KGI D Y +LI F + ++K A L + K +
Sbjct: 1073 IDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTI 1132
Query: 127 LRDLEVFLKLVLMYIEEG--MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
++ + LV +EG +++++L ++ M++ + +I++ ++
Sbjct: 1133 NPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKV 1192
Query: 185 VKVYEQLISQGCI 197
K+ ++I++G +
Sbjct: 1193 EKLLHEMIARGLL 1205
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 135/328 (41%), Gaps = 36/328 (10%)
Query: 47 ECESRKLDLT-------------PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
C + LDL P+S Y L + L GR E + +M +KGI
Sbjct: 247 HCRNHNLDLAFAMFDRMVKDGCDPNSV-TYSTLINGLCSEGRLEEAMDMLEEMVQKGI-- 303
Query: 94 DPSVYASLI--CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
+P+VY I S A EL + +++G + +++ F L+ +G E +
Sbjct: 304 EPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIG 363
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+ M L + ++N + A +++ ++S G +P TY II +C
Sbjct: 364 LYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFC 423
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+G KA +F +M + G V+ Y++++ Y K G + +AMRL+ MK G +P+ W
Sbjct: 424 LMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAW 483
Query: 272 IYNSLMDMHGRAKNLRQLEK----------------YTTVISAY-NMAREFDMCVKFYNE 314
Y L+ R L YT +I Y N+A+ D F+
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM 543
Query: 315 FRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+G + +M+ FSK + I E
Sbjct: 544 VE-SGNLPSSQTYNVMISGFSKTNSISE 570
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 9/272 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM--YKILC 67
++ M S G + + Y +I++ F +GD +K +F K+ SS ++ Y L
Sbjct: 400 FKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF-----DKMLKAGSSPNVITYNTLI 454
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
K G ++ MK G+ D Y LI F+ +++ A LF E G+
Sbjct: 455 YGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGIS 514
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + ++ Y V+ L + M + S V+++GFSK + A
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++ QG +P +TY S I+ CR G A K+F EM+++ + + YSS++ +
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634
Query: 248 TGRIRDA--MRLVAKMKPKGCEPNVWIYNSLM 277
GR DA L+A++ GCEPNV Y +L+
Sbjct: 635 EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 5/276 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KMK G V + + ++ + G E L+ + + L P++ Y L + L
Sbjct: 332 KMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD--GLVPTTV-TYNALINQLC 388
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
GR F+ M G L Y +I F + +++ A +F + + G ++
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ Y ++G + + ++E MK L +++GFS+ A ++ +
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ G P VTY +II+ Y + A +F +M + G Y+ M++ + KT I
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+A KM +G PNV Y S +D G +N R
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFID--GLCRNGR 602
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 85/180 (47%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ +L+ V +A +++ + G+ L F ++ + ++G V++ ++ +
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIF 229
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ + ++ G + A ++++++ GC P VTY+++IN C G
Sbjct: 230 RYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLE 289
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A + EM QKG + V Y+ + G +A+ L+ KMK +GC PN+ + +L+
Sbjct: 290 EAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALI 349
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 99/231 (42%), Gaps = 2/231 (0%)
Query: 63 YKILCDSLGKSGRAFEI-LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ L L + G+ FEI + + M G++ Y +LI + A +FK
Sbjct: 345 FTALISGLSRDGK-FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G L + + +++ + G ++K + + + M A + + ++ G+ K+
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++ E + G P TY +I+ + R G A +F M + G V Y+++
Sbjct: 464 NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+ Y ++ DA+ L KM G P+ YN ++ + ++ + E +
Sbjct: 524 IDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 113/280 (40%), Gaps = 9/280 (3%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + E MK G+ D+ Y +++ F + G E +LF + S H
Sbjct: 462 NLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI----SPNH 517
Query: 62 M-YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y + D + + L F M E G L Y +I F+ + AE +
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKR 178
++G+L ++ + + G ++ M +N N+ S +I +
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT-YSSLIYGLCQEG 636
Query: 179 RAYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
RA A + + +L GC P TY +++ C G +A+++ + MQ+KG
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y +++ K ++ A+ + M G + ++ Y +L+
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALI 736
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 138/319 (43%), Gaps = 60/319 (18%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAF-E 78
LD Y I+ A+ + G ++ LF + E LD T + Y ++ D GK GR++
Sbjct: 214 LDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVT---YNVMLDVYGKMGRSWGR 270
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL-KLV 137
IL+ +M+ KG+ D +++I + +GML + FL +L
Sbjct: 271 ILELLDEMRSKGLEFDEFTCSTVISACG----------------REGMLDEARKFLAELK 314
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
L + G V M N+ L + F K Y A+ + +++ C
Sbjct: 315 LNGYKPGTV---------MYNSMLQV-----------FGKAGIYTEALSILKEMEDNNCP 354
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P +TY + Y R G + V M KG + Y++++ YGK GR DA+RL
Sbjct: 355 PDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRL 414
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
+KMK GC PNV+ YNS++ M G+ +R D+ +K E ++
Sbjct: 415 FSKMKDLGCAPNVYTYNSVLAMLGKK------------------SRTEDV-IKVLCEMKL 455
Query: 318 NGGVIDRAMAGIMVGVFSK 336
NG +RA M+ V S+
Sbjct: 456 NGCAPNRATWNTMLAVCSE 474
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 106/229 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D+ GK+GR + L+ F MK+ G + Y S++ + + ++ E +
Sbjct: 395 YTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMK 454
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G + + ++ + EEG +V+ MKN +++ +++ +
Sbjct: 455 LNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEV 514
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ K+Y +++ G P TY +++NA G + AE V +MQ KGF +YS ++
Sbjct: 515 DSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLL 574
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
Y K G +R ++ ++ P+ + +L+ + + ++LR +E+
Sbjct: 575 HCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMER 623
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 131/312 (41%), Gaps = 48/312 (15%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M S G++ ++ Y +++A+ K G + LF + + L P+ + Y + L
Sbjct: 381 DTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLF--SKMKDLGCAPN-VYTYNSVLAML 437
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK R +++K +MK G + + + +++ + + ++ +E + G D
Sbjct: 438 GKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDK 497
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSKRRAYWAAV 185
+ F L+ Y G EV + E+ S CV ++N + R + AA
Sbjct: 498 DTFNTLISSYARCGS-----EVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAE 552
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV----------------------- 222
V + + ++G P + +Y+ +++ Y + G EKV
Sbjct: 553 SVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSN 612
Query: 223 ------------FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
F ++Q+ G+ +V +SM++M+ + A ++ + G +PN+
Sbjct: 613 HKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNL 672
Query: 271 WIYNSLMDMHGR 282
+ YN LMD++ R
Sbjct: 673 FTYNCLMDLYVR 684
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 117/252 (46%), Gaps = 17/252 (6%)
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ +A +LF + D+ + ++ Y G ++ +++ + M+ L+ +
Sbjct: 195 SQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTY 254
Query: 169 CVIVNGFSKRRAYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
V+++ + K W + ++ +++ S+G + T +++I+A R G+ +A K E++
Sbjct: 255 NVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELK 314
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
G+ V Y+SM+ ++GK G +A+ ++ +M+ C P+ YN L + RA L
Sbjct: 315 LNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLD 374
Query: 288 Q----------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
+ YTTVI AY A D ++ +++ + G + ++
Sbjct: 375 EGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVL 434
Query: 332 GVFSKLSQIEEL 343
+ K S+ E++
Sbjct: 435 AMLGKKSRTEDV 446
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 124/293 (42%), Gaps = 3/293 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M +G Y ++ A GD + ++ + +++ P+ T Y +L
Sbjct: 520 YGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGF--KPNETS-YSLLLHC 576
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+G I K +++ + + + +L+ S ++ E F + ++ G D
Sbjct: 577 YSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPD 636
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L V ++ M+ M K E++ + L + +++ + + W A +V +
Sbjct: 637 LVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLK 696
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + P V+Y ++I +CR GL +A +V EM KG +V Y++ ++ Y
Sbjct: 697 GIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGME 756
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+A ++ M C P+ Y L+D + +A + + T I +++
Sbjct: 757 LFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKIKEIDIS 809
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 96/215 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L S + G + K + +M + G + Y +L+ + A + K AE + ++ +
Sbjct: 500 FNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQ 559
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + + L+ Y + G V +V + + + ++ S + +V K R
Sbjct: 560 TKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLR 619
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ ++QL G P V S+++ + R ++SKA ++ + + G + Y+ ++
Sbjct: 620 GMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLM 679
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+Y + A ++ ++ EP+V YN+++
Sbjct: 680 DLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVI 714
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 144/322 (44%), Gaps = 43/322 (13%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH+++ + + G LD Y ++ KIG++ + + E + L + MY I+
Sbjct: 149 LHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGK---LVNTDVVMYNII 205
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+SL K + + + +M K I D + SLI F + ++K A LF E K +
Sbjct: 206 INSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNI 265
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS--------CVI------- 171
D+ F LV ++G + + ++ M + I D ++ C++
Sbjct: 266 NPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGV-IPDVVTYSSLMDGYCLVNEVNKAK 324
Query: 172 ---------------------VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
+NG K + A+ +++++ +G P VTY S+I+
Sbjct: 325 HVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGL 384
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
C++G S A ++ EM G ++ Y+S++ + K I A+ LV K+K +G +P++
Sbjct: 385 CKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSM 444
Query: 271 WIYNSLMD---MHGRAKNLRQL 289
+ YN L+D GR KN + +
Sbjct: 445 YTYNILIDGLCKGGRLKNAQDV 466
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 116/253 (45%), Gaps = 3/253 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G++ D Y +M+ + + + K +F +L + P + H Y I+ + LGK
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVF--STMSRLGVAPHA-HSYNIMINGLGK 351
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
E L F++M KGI D Y SLI + + A +L E G+ D+
Sbjct: 352 IKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILT 411
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + + ++K + +V+ +K+ + S ++++G K A V++ L+
Sbjct: 412 YNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLL 471
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G TY +IN C+ GL+++AE + +M+ G V Y +++ +
Sbjct: 472 IKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENE 531
Query: 253 DAMRLVAKMKPKG 265
A +L+ +M +G
Sbjct: 532 KAEKLLREMIIRG 544
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 105/256 (41%), Gaps = 45/256 (17%)
Query: 23 GCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKF 82
CYC + E + K+ KL P++ + L + + +G+ E L F
Sbjct: 102 NCYCHLGEMTFAFSIFAKIL---------KLGYHPTTI-TFNTLINGICLNGKLKEALHF 151
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
+ G D Y +LI I E + A ++ K+ E K + D V+MY
Sbjct: 152 HDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTD-------VVMY-- 202
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
+I+N K +A A ++Y ++I++ P VT
Sbjct: 203 --------------------------NIIINSLCKDKAVSDAYQLYSEMITKRISPDVVT 236
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
+ S+I +C +G +A +F EM K + V +S +V K G I A ++A M
Sbjct: 237 FNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMM 296
Query: 263 PKGCEPNVWIYNSLMD 278
+G P+V Y+SLMD
Sbjct: 297 KQGVIPDVVTYSSLMD 312
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 133/319 (41%), Gaps = 38/319 (11%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
S L + + +AG D Y +++ F GD + L E L PS+
Sbjct: 411 SDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSN--- 467
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
++ L K G L+FF M E GIL + +I + V+ A L E +
Sbjct: 468 FESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQ 527
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G+ +L + ++ +E E+ LE+ M + S + +++GF+K+
Sbjct: 528 TQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQ 587
Query: 183 AAVKVYEQLI-----------------------------------SQGCIPGQVTYASII 207
A+ +Y +++ G P +++Y S+I
Sbjct: 588 KALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVI 647
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
+CRIG KA +F EM Q+G VV Y+S+V Y K RI A L+ +MK KG
Sbjct: 648 AGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGIT 707
Query: 268 PNVWIYNSLMDMHGRAKNL 286
P+V YN L+ H R NL
Sbjct: 708 PDVVTYNVLIAAHRRRGNL 726
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 3/273 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L E+MKS GI D Y ++ F K GD EK L+L E + ++ PS Y L
Sbjct: 345 LKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEK--GLYLIEEMKYSNMEPSLVS-YSSL 401
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L K + L FRD+ G D + Y+ LI F ++ A +L +E +
Sbjct: 402 FHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNL 461
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D F LV + + G+ LE M + S VI++ + A+
Sbjct: 462 APDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALN 521
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ +QG P TY ++IN C+ +A ++F M ++ VV YS+++ +
Sbjct: 522 LMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFA 581
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
K + A+ L A+M G P++ Y L+++
Sbjct: 582 KQSNSQKALMLYARMLKIGVTPDMVAYTILINI 614
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 125/272 (45%), Gaps = 9/272 (3%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L ++ M GI+ I++A + G E+ L E +++ + + Y
Sbjct: 483 NALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIF---PNLFTYN 539
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ + L K ++ L+ F M ++ +L VY++LI FA + + A L+ +
Sbjct: 540 AVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKI 599
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK---RRAY 181
G+ D+ + L+ + + + + + M + ++ GF + R
Sbjct: 600 GVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKA 659
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
WA ++ +++ +G +P VTY S+++ YC++ A+ + EM++KG VV Y+ +
Sbjct: 660 WA---LFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVL 716
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
+A + + G + A+ ++ +MK G P+ Y
Sbjct: 717 IAAHRRRGNLDKALEMLNEMKENGVLPDHMTY 748
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 104/220 (47%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ + Y + L K G E LK +MK GI D Y+ LI F +V+ L
Sbjct: 324 NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLI 383
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E + M L + L ++ + + +L++ + A +++ GF +
Sbjct: 384 EEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQ 443
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+A K+ E+++ P + S+++ +C++GL+ A + F M + G +
Sbjct: 444 GDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATC 503
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ ++ + + GR+ +A+ L+ +M+ +G PN++ YN++++
Sbjct: 504 NVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVIN 543
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 16/182 (8%)
Query: 114 AEELFKEAEE--KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDCISC 169
A ELF E K R + VF L+ ++ M+E ++V K EL+ C
Sbjct: 161 AFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFL 220
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE-------KV 222
+ + RR + ++ +E++ S G P TY ++N YC+ G + +A+ ++
Sbjct: 221 LKCLAEANRREFLRSL--FEEMKSTGPPPNVFTYTIMMNFYCK-GNFGEADIDTRQATEI 277
Query: 223 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
EM++ G VV YS+ + + G + A+ V + NV+ YN++ +HG
Sbjct: 278 LEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAI--IHGL 335
Query: 283 AK 284
K
Sbjct: 336 CK 337
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 135/328 (41%), Gaps = 36/328 (10%)
Query: 47 ECESRKLDLT-------------PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
C + LDL P+S Y L + L GR E + +M +KGI
Sbjct: 247 HCRNHNLDLAFAMFDRMVKDGCDPNSV-TYSTLINGLCSEGRLEEAMDMLEEMVQKGI-- 303
Query: 94 DPSVYASLI--CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
+P+VY I S A EL + +++G + +++ F L+ +G E +
Sbjct: 304 EPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIG 363
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+ M L + ++N + A +++ ++S G +P TY II +C
Sbjct: 364 LYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFC 423
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+G KA +F +M + G V+ Y++++ Y K G + +AMRL+ MK G +P+ W
Sbjct: 424 LMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAW 483
Query: 272 IYNSLMDMHGRAKNLRQLEK----------------YTTVISAY-NMAREFDMCVKFYNE 314
Y L+ R L YT +I Y N+A+ D F+
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM 543
Query: 315 FRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+G + +M+ FSK + I E
Sbjct: 544 VE-SGNLPSSQTYNVMISGFSKTNSISE 570
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 9/272 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM--YKILC 67
++ M S G + + Y +I++ F +GD +K +F K+ SS ++ Y L
Sbjct: 400 FKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF-----DKMLKAGSSPNVITYNTLI 454
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
K G ++ MK G+ D Y LI F+ +++ A LF E G+
Sbjct: 455 YGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGIS 514
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + ++ Y V+ L + M + S V+++GFSK + A
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++ QG +P +TY S I+ CR G A K+F EM+++ + + YSS++ +
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634
Query: 248 TGRIRDA--MRLVAKMKPKGCEPNVWIYNSLM 277
GR DA L+A++ GCEPNV Y +L+
Sbjct: 635 EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 5/276 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KMK G V + + ++ + G E L+ + + L P++ Y L + L
Sbjct: 332 KMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD--GLVPTTV-TYNALINQLC 388
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
GR F+ M G L Y +I F + +++ A +F + + G ++
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ Y ++G + + ++E MK L +++GFS+ A ++ +
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ G P VTY +II+ Y + A +F +M + G Y+ M++ + KT I
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+A KM +G PNV Y S +D G +N R
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFID--GLCRNGR 602
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 85/180 (47%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ +L+ V +A +++ + G+ L F ++ + ++G V++ ++ +
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIF 229
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ + ++ G + A ++++++ GC P VTY+++IN C G
Sbjct: 230 RYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLE 289
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A + EM QKG + V Y+ + G +A+ L+ KMK +GC PN+ + +L+
Sbjct: 290 EAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALI 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 99/231 (42%), Gaps = 2/231 (0%)
Query: 63 YKILCDSLGKSGRAFEI-LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ L L + G+ FEI + + M G++ Y +LI + A +FK
Sbjct: 345 FTALISGLSRDGK-FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G L + + +++ + G ++K + + + M A + + ++ G+ K+
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++ E + G P TY +I+ + R G A +F M + G V Y+++
Sbjct: 464 NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+ Y ++ DA+ L KM G P+ YN ++ + ++ + E +
Sbjct: 524 IDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 113/280 (40%), Gaps = 9/280 (3%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + E MK G+ D+ Y +++ F + G E +LF + S H
Sbjct: 462 NLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI----SPNH 517
Query: 62 M-YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y + D + + L F M E G L Y +I F+ + AE +
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKR 178
++G+L ++ + + G ++ M +N N+ S +I +
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT-YSSLIYGLCQEG 636
Query: 179 RAYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
RA A + + +L GC P TY +++ C G +A+++ + MQ+KG
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y +++ K ++ A+ + M G + ++ Y +L+
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALI 736
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 58/141 (41%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L GR +E + M++KG+ +Y +L+ +V+ A +F +
Sbjct: 662 YTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMD 721
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G L + L+ +E +E+ + ++M N + + V+++G K
Sbjct: 722 TLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETD 781
Query: 183 AAVKVYEQLISQGCIPGQVTY 203
+K+ + S+ C TY
Sbjct: 782 LCLKLLHVMESRNCTLNFQTY 802
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 150/338 (44%), Gaps = 23/338 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M++ GI G Y +++ D KV A+F E +S+ L + Y + ++ +
Sbjct: 128 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLS---GDVYFYSSVINAYCR 184
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G + F + GI + Y +LI F I +++ AE L + + +G+ + V
Sbjct: 185 AGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIV 244
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F ++ Y + MV+K LE+ M+ + + + G + A + +I
Sbjct: 245 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 304
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P V+Y ++I+ +C G +A ++F EM G + +V Y+ M+ Y K G IR
Sbjct: 305 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 364
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------LRQLEK------------YTT 294
+A R +M+ KG P+++ Y +L +HG N LR E+ YT
Sbjct: 365 EAERFKNEMEKKGLVPDIYSYAAL--VHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTA 422
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
+IS + + Y+ +G D A+ +VG
Sbjct: 423 LISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVG 460
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 117/270 (43%), Gaps = 38/270 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ +++ CY +++A+ + D ++VA + E+ ++ T + Y IL D L
Sbjct: 91 DEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGT---YTILVDGL 147
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ ++ F +MK K + D Y+S+I ++ V+ A E+F E G+ +
Sbjct: 148 SAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNE 207
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ NGF K AA +
Sbjct: 208 HTYGALI-----------------------------------NGFCKIGQMEAAEMLVTD 232
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G Q+ + ++I+ YCR + KA ++ + M++ G + V Y+++ + R
Sbjct: 233 MQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANR 292
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ +A L+ M KG PN Y +L+ +H
Sbjct: 293 MDEAKNLLRIMIEKGVRPNHVSYTTLISIH 322
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 1/192 (0%)
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
P + ++ + V A +L E G+ + + L+ Y E ++ E+++
Sbjct: 67 PLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLK 126
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M+N + + ++V+G S R V+E++ S+ Y+S+INAYCR G
Sbjct: 127 VMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAG 186
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A +VF E G + Y +++ + K G++ A LV M+ +G N ++N
Sbjct: 187 NVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFN 246
Query: 275 SLMDMHGRAKNL 286
+++D + R KN+
Sbjct: 247 TMIDGYCR-KNM 257
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
Query: 156 MKNAELNISDCIS----CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+K A + D ++ V+V+G+ K A ++ +++ G + Y S+++AY
Sbjct: 54 LKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYT 113
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
R + ++ M+ +G + V Y+ +V I + +MK K +V+
Sbjct: 114 REKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVY 173
Query: 272 IYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
Y+S+++ + RA N+R+ + FD CV NG + G ++
Sbjct: 174 FYSSVINAYCRAGNVRRASEV------------FDECVG-------NGIEPNEHTYGALI 214
Query: 332 GVFSKLSQIE 341
F K+ Q+E
Sbjct: 215 NGFCKIGQME 224
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 100 bits (249), Expect = 1e-18, Method: Composition-based stats.
Identities = 72/307 (23%), Positives = 137/307 (44%), Gaps = 13/307 (4%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S + +MK G+ + Y ++ F+K D+ +LF E + Y
Sbjct: 1238 SAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLF---EEMRHQYCRPDVFTYT 1294
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L LGK+GR E FF +M+ +G D ++I + A +LF+E E
Sbjct: 1295 ELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETL 1354
Query: 125 GMLRDLEVFLKLVLMYIE-EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + + ++ E + + E MK + ++ S ++++GF K
Sbjct: 1355 RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEK 1414
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ + E++ +G P Y S+I+A + Y A ++F E+++ Y+ M+
Sbjct: 1415 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIK 1474
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-------KNLRQLEKYTTV- 295
GK GR+ DA+ + +M GC P+V+ YN+LM R +R+++++ +
Sbjct: 1475 HLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 1534
Query: 296 -ISAYNM 301
I++YN+
Sbjct: 1535 DINSYNI 1541
Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 71/310 (22%), Positives = 127/310 (40%), Gaps = 26/310 (8%)
Query: 36 GDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDP 95
G EKV L+ E + + T Y L + K GR ++ +MKE G+
Sbjct: 1198 GQYEKVHQLYNEMSTEGHCFPDTVT--YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTT 1255
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
+Y LI F + A LF+E + D+ + +L+ + G +++
Sbjct: 1256 KIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCE 1315
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
M+ ++N K A+K+++++ + CIP VTY +II A
Sbjct: 1316 MQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESK- 1374
Query: 216 YSKAEKV---FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
S+A +V F M++ G YS ++ + KT R+ AM L+ +M KG P
Sbjct: 1375 -SRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAA 1433
Query: 273 YNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
Y SL+D G+ A+ +D+ + + E + N G + +M+
Sbjct: 1434 YCSLIDALGK-------------------AKRYDLACELFQELKENCGSSSARVYAVMIK 1474
Query: 333 VFSKLSQIEE 342
K ++++
Sbjct: 1475 HLGKAGRLDD 1484
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 67/301 (22%), Positives = 128/301 (42%), Gaps = 6/301 (1%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H++ +M+ G D+ ++ K G + LF E E+ L PS I+
Sbjct: 1311 HFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMET--LRCIPSVVTYNTIIK 1368
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
RA E+ +F MKE GI Y+ LI F ++ A L +E +EKG
Sbjct: 1369 ALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFP 1428
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ L+ + + E+ + +K + S + V++ K A+ +
Sbjct: 1429 PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINM 1488
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++++ GC P Y ++++ R G+ +A MQ+ G + +Y+ ++ K
Sbjct: 1489 FDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAK 1548
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN-MAREFD 306
TG AM +++ MK P+V YN+++ G + E+ + ++ N + E+D
Sbjct: 1549 TGGPHRAMEMLSNMKQSTVRPDVVSYNTVL---GALSHAGMFEEASKLMKEMNTLGFEYD 1605
Query: 307 M 307
+
Sbjct: 1606 L 1606
Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats.
Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 38/274 (13%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++E+MK +GI S Y +++ F K EK L E + + P++ Y L D
Sbjct: 1383 WFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAA---YCSLID 1439
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+LGK+ R + F+++KE VYA +I + A +F E + G
Sbjct: 1440 ALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAP 1499
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ GM+++ L + M+
Sbjct: 1500 DVYAYNALMSGLARTGMLDEALSTMRRMQ------------------------------- 1528
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
GCIP +Y I+N + G +A ++ M+Q VV+Y++++
Sbjct: 1529 ----EHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHA 1584
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
G +A +L+ +M G E ++ Y+S+++ G+
Sbjct: 1585 GMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 1618
Score = 75.9 bits (185), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG-MLR 128
LG + + + F +K + Y S+I + + +L+ E +G
Sbjct: 1159 LGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFP 1218
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ + + G + ++++ MK + + I +++ F K A+ ++
Sbjct: 1219 DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLF 1278
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ Q C P TY +I + G +A F EMQ++G V ++M+ GK
Sbjct: 1279 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKA 1338
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ DAM+L +M+ C P+V YN+++
Sbjct: 1339 GRLDDAMKLFQEMETLRCIPSVVTYNTII 1367
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 39/248 (15%)
Query: 1 TNSQSK-LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS 59
TN K + E+M G YC +++A K + LF E K + SS
Sbjct: 1409 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL---KENCGSSS 1465
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
+Y ++ LGK+GR + + F +M + G D Y +L+ A + A +
Sbjct: 1466 ARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMR 1525
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
+E G + D+ + +I+NG +K
Sbjct: 1526 RMQEHGCIPDINSY-----------------------------------NIILNGLAKTG 1550
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+++ + P V+Y +++ A G++ +A K+ EM GF+ ++ YS
Sbjct: 1551 GPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYS 1610
Query: 240 SMVAMYGK 247
S++ GK
Sbjct: 1611 SILEAIGK 1618
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/213 (23%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 80 LKFFR-DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK--- 135
++FFR K + D S Y +LI + + E++K +E M+R+ +
Sbjct: 1097 MQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYG---EMWKMIQE--MVRNPICVVTPTE 1151
Query: 136 ---LVLMYIEEGMVEKTLEVVESMKNAELN-ISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+V M MV + + + +K + I+ + +I+ Y ++Y ++
Sbjct: 1152 LSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIM-LMHEGQYEKVHQLYNEM 1210
Query: 192 ISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++G C P VTY+++I+A+C++G A ++ EM++ G Y+ ++A++ K
Sbjct: 1211 STEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFND 1270
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
A+ L +M+ + C P+V+ Y L+ G+A
Sbjct: 1271 AHGALSLFEEMRHQYCRPDVFTYTELIRGLGKA 1303
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/231 (20%), Positives = 103/231 (44%), Gaps = 4/231 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGI-LEDPSVYASLICSFASIAEVKVAEE 116
+ST+M I C L + E+ K ++M I + P+ + ++ + V+ A
Sbjct: 1113 TSTYMALIHC--LEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAIT 1170
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGF 175
+F + + + + + +++M + EG EK ++ M D ++ +++ F
Sbjct: 1171 IFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAF 1230
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K +A+++ ++ G P Y +I + + A +F EM+ + V
Sbjct: 1231 CKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDV 1290
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
Y+ ++ GK GRI +A +M+ +GC P+ N++++ G+A L
Sbjct: 1291 FTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRL 1341
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 135/283 (47%), Gaps = 19/283 (6%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M S G V D Y +++ F + D+ KV FL E K + S + Y IL DS
Sbjct: 443 EMMSKGFVPDDSTYSKVI-GF--LCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFC 499
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G + +F +M + Y SLI ++ +V A +LF+ +G ++
Sbjct: 500 KAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVV 559
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNA----------ELNISDCISCVI------VNGF 175
+ L+ + + G ++K ++ M+ +L+ +DC + I V+G
Sbjct: 560 TYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGL 619
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A ++ + + GC P Q+ Y ++I+ +C+ G A++VF++M ++G+ +
Sbjct: 620 CKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNL 679
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
YSS++ K R+ +++++KM C PNV IY ++D
Sbjct: 680 YTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMID 722
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 119/279 (42%), Gaps = 21/279 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L K+ R E + M G + VY +LI F +++ A+E+F +
Sbjct: 612 YGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMS 671
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G +L + L+ +E ++ L+V+ M + I +++G K
Sbjct: 672 ERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTE 731
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ ++ GC P +TY ++I+ + +IG + +++ +M KG + Y ++
Sbjct: 732 EAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLI 791
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
TG + +A RL+ +MK W R + Y +I +N
Sbjct: 792 NHCCSTGLLDEAHRLLDEMK-----QTYWP--------------RHISSYRKIIEGFN-- 830
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
REF + +E N V ++ I++ F K ++E
Sbjct: 831 REFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLE 869
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 55/254 (21%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
++ + LC + GK +AFEI+ +M KG + D S Y+ +I ++V+ A LF+
Sbjct: 422 SNFARCLCGA-GKFDKAFEIIC---EMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFE 477
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E ++ G++ + + L+ + + G++++
Sbjct: 478 EMKKNGIVPSVYTYTILIDSFCKAGLIQQ------------------------------- 506
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A +++++ C P VTY S+I+AY + A K+F M +G VV Y+
Sbjct: 507 ----ARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYT 562
Query: 240 SMVAMYGKTGRIRDAMRLVAKMK---------------PKGCE-PNVWIYNSLMDMHGRA 283
+++ + K G+I A ++ A+M+ CE PN+ Y +L+D +A
Sbjct: 563 ALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKA 622
Query: 284 KNLRQLEKYTTVIS 297
+ + + +S
Sbjct: 623 NRVEEAHELLDTMS 636
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 103/264 (39%), Gaps = 52/264 (19%)
Query: 63 YKIL---CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
Y+IL C G+ GR IL M +G + ++ SL+ ++ + A +LFK
Sbjct: 310 YRILLSGCLGKGQLGRCKRILSM---MMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFK 366
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
K++ + G + + + N EL SD +
Sbjct: 367 ---------------KMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLE----------- 400
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A K Y +++ G + +V ++ C G + KA ++ EM KGF YS
Sbjct: 401 ---LAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYS 457
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-------- 291
++ ++ A L +MK G P+V+ Y L+D +A ++Q
Sbjct: 458 KVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRD 517
Query: 292 --------YTTVISAYNMARE-FD 306
YT++I AY AR+ FD
Sbjct: 518 NCTPNVVTYTSLIHAYLKARKVFD 541
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 76/189 (40%), Gaps = 3/189 (1%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
+K+ G P+ Y +LI F ++ A + +E G D + G
Sbjct: 196 LKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGR 255
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
L ++E E +V+G + + A+ + +++ S CIP VTY
Sbjct: 256 CGDALSLLEK---EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRI 312
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+++ G + +++ M +G ++S+V Y K+ A +L KM G
Sbjct: 313 LLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCG 372
Query: 266 CEPNVWIYN 274
C+P +YN
Sbjct: 373 CQPGYLLYN 381
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 119/240 (49%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D+ G+ + + + + E + YA L+ ++ + + AE + E +
Sbjct: 190 YNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISEMQ 249
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G+ V+ + ++ K +EV + MK + +++N + K +
Sbjct: 250 EHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQPM 309
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+A+K++ ++ S GC TY +++NA+ R GL KAE+VF +MQQ G + V AY++++
Sbjct: 310 SAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALM 369
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
Y + G + A + + M+ GCEP+ YN L+D +GRA R+ E + MA
Sbjct: 370 EAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMA 429
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 136/307 (44%), Gaps = 22/307 (7%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++T Y ++ + GKS + +K F +M+ G + Y +L+ +FA + AEE+
Sbjct: 290 TNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEV 349
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F++ ++ G D+ + L+ Y G + E+ M++ ++V+ + +
Sbjct: 350 FEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGR 409
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A +E L QG P ++ +++A+ R G + E+V ++ + G A
Sbjct: 410 AGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFA 469
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------- 290
++M+ Y + GR+ D RL+A M G +V +N ++ + RA L ++E
Sbjct: 470 LNAMLHAYARAGRLDDMERLLAAMDLAG-SADVGSHNVAVNAYARAGYLGRMEAAFEGIR 528
Query: 291 --------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+T+ + Y +E+ C++ + E G D A +++ S
Sbjct: 529 RRKGKKGGIDADVVSWTSRMGGYARKKEYGKCLEIFEEMVDAGCYPDAGTAKVLMAACSD 588
Query: 337 LSQIEEL 343
Q+E++
Sbjct: 589 ERQVEQV 595
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 122/251 (48%), Gaps = 3/251 (1%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P S +Y D L K+ + ++ ++ MK++ + Y +I + + A +
Sbjct: 254 PPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMK 313
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+F E + G ++ + LV + EG+ EK EV E M+ A ++ +S
Sbjct: 314 IFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYS 373
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ A +++ + GC P + +Y +++AY R GL+ +AE F ++Q+G +
Sbjct: 374 RAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMK 433
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
++ +++ + ++G + +++A++ G P+ + N+++ + RA L +E+ ++
Sbjct: 434 SHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMER---LL 490
Query: 297 SAYNMAREFDM 307
+A ++A D+
Sbjct: 491 AAMDLAGSADV 501
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 51/218 (23%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++++ + ++R A +Y ++ C+P + TYA ++ AYC +AE V EMQ+
Sbjct: 192 LLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISEMQEH 251
Query: 230 GFD----------------KCVV-------------------AYSSMVAMYGKTGRIRDA 254
G +C V Y+ M+ +YGK+ + A
Sbjct: 252 GIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQPMSA 311
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGR----------------AKNLRQLEKYTTVISA 298
M++ +M+ GC+ N+ Y +L++ R A + + Y ++ A
Sbjct: 312 MKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEA 371
Query: 299 YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
Y+ A + ++ + G DRA I+V + +
Sbjct: 372 YSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGR 409
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 97/246 (39%), Gaps = 53/246 (21%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF-----LECESRKLDLTPSSTHMYK 64
+E+M+ AG D Y +MEA+ + G + + +F + CE + Y
Sbjct: 350 FEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRAS--------YN 401
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
IL D+ G++G E F +K++G+ + L+ + A V E++ + +
Sbjct: 402 ILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKS 461
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM----------KNAELNI----------- 163
G+ D ++ Y G ++ ++ +M N +N
Sbjct: 462 GLRPDTFALNAMLHAYARAGRLDDMERLLAAMDLAGSADVGSHNVAVNAYARAGYLGRME 521
Query: 164 -----------------SDCISCVI-VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+D +S + G+++++ Y ++++E+++ GC P T A
Sbjct: 522 AAFEGIRRRKGKKGGIDADVVSWTSRMGGYARKKEYGKCLEIFEEMVDAGCYPDAGT-AK 580
Query: 206 IINAYC 211
++ A C
Sbjct: 581 VLMAAC 586
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 93/213 (43%), Gaps = 20/213 (9%)
Query: 125 GMLRDLEVFLKLVLMYIEEGM-VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ L + +L ++++G V K E ++++ N+ D I V V R +
Sbjct: 112 GVFPVLSPMAQDILEFVQKGTDVAKIWESLDNIPPTH-NLWDDILNVAVQ-LRLNRQWDP 169
Query: 184 AVKVYEQLISQGCI-PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ V E ++ + P + Y +I+AY R +KAE ++ + + Y+ ++
Sbjct: 170 IISVCEWIVYRSSFRPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLL 229
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------------MHGRAKNLR-- 287
Y + A ++++M+ G P+ +YN+ +D ++ R K R
Sbjct: 230 RAYCNARSLHRAEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCR 289
Query: 288 -QLEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
E YT +I+ Y +++ +K +NE + G
Sbjct: 290 TNTETYTLMINVYGKSKQPMSAMKIFNEMQSIG 322
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 3/275 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
LH+++K+ + G L+ CY ++ K+G + L + + L + MY
Sbjct: 143 HQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGK---LVQPNVVMY 199
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ DS+ K E + +M KGI D Y++LI F + ++ A LF +
Sbjct: 200 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMIS 259
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + D+ F LV + +EG V++ V+ M + C +++G+ +
Sbjct: 260 EEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNK 319
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ + G +Y +IN +C+I +A +F EM K VV Y+S++
Sbjct: 320 AKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLID 379
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+G+I A++LV +M +G + YNS++D
Sbjct: 380 GLCKSGKISYALKLVDEMHDRGVPHDKITYNSILD 414
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 116/299 (38%), Gaps = 38/299 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M S GI D Y ++ F +G LF + S +++ + + IL D
Sbjct: 219 YSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEIN---PDVYTFSILVDG 275
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASL---------------------------- 101
K GR E M ++GI D Y SL
Sbjct: 276 FCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTAN 335
Query: 102 -------ICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
I F I +V A LFKE K ++ D+ + L+ + G + L++V+
Sbjct: 336 VQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVD 395
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M + + I++ K A+ + ++ +G P TY +I+ C+ G
Sbjct: 396 EMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGG 455
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
A+ +F ++ KG++ V Y+ M+ + A+ L++KM+ GC PN Y
Sbjct: 456 RLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTY 514
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 133/307 (43%), Gaps = 17/307 (5%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
++ TP KIL SL K + R+M+ GI D + LI F+ +
Sbjct: 49 NINPTPPIFEFGKIL-GSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHT 107
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+ +F +KG + L+ +G + + L + + +++ +
Sbjct: 108 HFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTL 167
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+NG K AA+++ ++ + P V Y +II++ C++ L ++A ++ EM KG
Sbjct: 168 INGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGI 227
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQ 288
VV YS++++ + G++ DA+ L KM + P+V+ ++ L+D GR K +
Sbjct: 228 SPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKN 287
Query: 289 -------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+ Y +++ Y + ++ + +N G + IM+ F
Sbjct: 288 VLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFC 347
Query: 336 KLSQIEE 342
K+ +++E
Sbjct: 348 KIKKVDE 354
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 3/222 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M G+ + Y ++ F KI ++ LF E + ++ P Y L D
Sbjct: 324 FNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCK--NIIPDVV-TYNSLIDG 380
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSG+ LK +M ++G+ D Y S++ + +V A L + +++G+ D
Sbjct: 381 LCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 440
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G ++ + E + NI+ V++ GF + A+ +
Sbjct: 441 MYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLS 500
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ GCIP TY II + AEK+ EM +G
Sbjct: 501 KMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 4/218 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + DSL K E ++F +M ++GI D Y +++ F S+ ++ A LFKE
Sbjct: 239 YNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMV 298
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRA 180
+ ++ D F LV +EGMV + V E+M K AE N +++G+
Sbjct: 299 GRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAY--TYNALMDGYCLHNQ 356
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A+KV +I +GC P +Y +IN YC+ ++A+++ EM +K V YS+
Sbjct: 357 MDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYST 416
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ + GR R+A+ L +M G P++ Y+ L+D
Sbjct: 417 LMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLD 454
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 124/255 (48%), Gaps = 5/255 (1%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIA 109
KL + P + + L + L G+ E + F +M G +P+V Y ++I
Sbjct: 159 KLGIQPDAI-TFNTLINGLCNEGKIKEAVGLFNEMVWSG--HEPNVISYNTVINGLCKNG 215
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
+A +F++ E+ ++ + ++ ++ +V + +E + M + +
Sbjct: 216 NTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYN 275
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
I++GF A +++++++ + +P VT+ +++ C+ G+ S+A V M +K
Sbjct: 276 TILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEK 335
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G + Y++++ Y ++ +A++++ M KGC PN+ YN L++ + ++K + +
Sbjct: 336 GAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEA 395
Query: 290 EKYTTVISAYNMARE 304
++ + +S N+ +
Sbjct: 396 KRLLSEMSEKNLTPD 410
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 100/217 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL + KS R E + +M EK + D Y++L+ + + A LFKE
Sbjct: 379 YNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMC 438
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+L DL + L+ + + G +++ L++++ M + + + +++ G
Sbjct: 439 SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLE 498
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +++ +L + G P TY +I + GL +A + F +M+ GF +Y+ ++
Sbjct: 499 VAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVII 558
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ + A++L+ +M K + + L+D+
Sbjct: 559 QGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDL 595
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V++N + AV V ++ G P +T+ ++IN C G +A +F EM
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G + V++Y++++ K G A+R+ KM+ +PNV YN+++D
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIID 244
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/304 (18%), Positives = 107/304 (35%), Gaps = 73/304 (24%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ +M GI D Y I+ F +G + LF E R ++ P T + IL D
Sbjct: 258 FLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR--NVMPD-TVTFNILVD 314
Query: 69 SLGKSG-----------------------------------RAFEILKFFRDMKEKGILE 93
L K G + E +K M KG
Sbjct: 315 GLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAP 374
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ S Y LI + + A+ L E EK + D +
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTY-------------------- 414
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
++ G + A+ +++++ S G +P + Y+ +++ +C+
Sbjct: 415 ---------------STLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKH 459
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G +A K+ EM ++ ++ Y+ ++ G++ A L +K+ G P++W Y
Sbjct: 460 GHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTY 519
Query: 274 NSLM 277
N ++
Sbjct: 520 NVMI 523
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 20/185 (10%)
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+K++ Y +AV + Q+ G + +IN CR+ A V +M + G
Sbjct: 107 AKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDA 166
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN---------L 286
+ +++++ G+I++A+ L +M G EPNV YN++++ G KN
Sbjct: 167 ITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVIN--GLCKNGNTIMAVRVF 224
Query: 287 RQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
R++E+ Y T+I + R + V+F +E G D ++ F L
Sbjct: 225 RKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSL 284
Query: 338 SQIEE 342
Q+ E
Sbjct: 285 GQLNE 289
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 126/272 (46%), Gaps = 6/272 (2%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D Y +++ F+K GD K LF E R + P Y + +L K+ +
Sbjct: 222 DVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGI---PPDLVTYSSVVHALCKARAMGKAE 278
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
F R M KG+L D Y +LI ++S + K A +FKE +L D+ L+
Sbjct: 279 AFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSL 338
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G +++ +V ++M N +++NG++ + +++ ++ G P
Sbjct: 339 CKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDI 398
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
T++ +I AY G+ KA +F EM+ G VV Y++++A + G++ DAM +
Sbjct: 399 YTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQ 458
Query: 261 MKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
M +G P+ + Y+ L+ HG ++L
Sbjct: 459 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 490
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 130/305 (42%), Gaps = 16/305 (5%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D + + +L + G + + F +M++ G+ D Y ++I + I ++
Sbjct: 392 DGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDD 451
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A E F + ++G+ D + L+ + G + K E++ + N + + I+N
Sbjct: 452 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIIN 511
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
K A +++ ++ G P V Y+ +++ YC +G KA +VF M G +
Sbjct: 512 NLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 571
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD--------------M 279
VV Y ++V Y K GRI + + L +M KG +P+ +YN ++D
Sbjct: 572 NVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKF 631
Query: 280 HGRAKNLRQLEK--YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
H ++ + K Y V+ + R FD + + E R ID M+ +
Sbjct: 632 HEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 691
Query: 338 SQIEE 342
++EE
Sbjct: 692 RRVEE 696
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 43 ALFLECESRKLD---LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA 99
ALF SR L+P+S H Y IL D ++ R L FF + G+ D +
Sbjct: 96 ALFNRAASRAQGPRVLSPTS-HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIAN 154
Query: 100 SLICSFASIAEVKVAEE----LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
L+ F E K +E L E G + D+ + L+ ++G + +++
Sbjct: 155 HLLKGF---CEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRM 211
Query: 156 M-KNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M + + D ++ +++ F K A ++++++ +G P VTY+S+++A C+
Sbjct: 212 MAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKA 271
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
KAE +M KG Y++++ Y TG+ ++A+R+ +M+ P+V
Sbjct: 272 RAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 331
Query: 274 NSLM 277
N LM
Sbjct: 332 NMLM 335
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 8/169 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ M SAGI + Y ++ + KIG ++ +LF E + + ST +Y
Sbjct: 555 EKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK---PSTILY 611
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+ D L +GR F +M E GI + Y ++ F A LFKE
Sbjct: 612 NIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRA 671
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
+ D+ ++ + VE+ ++ S+ + L + CV+
Sbjct: 672 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL-----VPCVVT 715
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 147/337 (43%), Gaps = 24/337 (7%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y +M S G+ Y +M A K DSE V L E E L L P+ + + I
Sbjct: 212 LEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMED--LGLRPN-VYTFTIC 268
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
LG++G+ E + FR M ++G D Y LI + + +++ A+ELF + + G
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAV 185
D +++ L+ + + G ++ E M+ A+ + D ++ ++V+ K R + A
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKEFWSQME-ADGYMPDVVTFTILVDVLCKARDFDEAF 387
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++ + QG +P TY ++I R G A K+ M+ G Y + + +
Sbjct: 388 ATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYF 447
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREF 305
GK+G A+ KMK KG PN+ N+ + LR+ +
Sbjct: 448 GKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK--------------- 492
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+N R NG D +M+ +SK+ Q++E
Sbjct: 493 ----TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDE 525
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 3/267 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M S D+ Y ++ + K + +K F + S TP + Y L D
Sbjct: 846 YKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRT---YGPLIDG 902
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K GR E ++ F +M + G + +++ LI + I + + A +LFK +G+ D
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+ + LV G V++ L +K+ L+ I+NG K + A+ +Y
Sbjct: 963 LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYN 1022
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ ++G +P TY S++ G+ +A++++ E+Q G + V Y++++ Y +
Sbjct: 1023 EMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A + M GC PN+ Y L
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 45/293 (15%)
Query: 6 KLHYYEK-------MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS 58
++HY EK MK+ G D+ + ++ K G ++ L+ E SR+ P
Sbjct: 800 EVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRC--KPD 857
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ Y I+ SL KS + L FF D+ P Y LI A + ++ A LF
Sbjct: 858 AI-TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E + G + +F +++NG+ K
Sbjct: 917 EEMSDYGCKPNCAIF-----------------------------------NILINGYGKI 941
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A +++++++++G P +Y +++ C G +A F E++ G D +AY
Sbjct: 942 GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ ++ GK+ R+ +A+ L +M+ +G P+++ YNSLM G A + Q ++
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKR 1054
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G D Y +++A G E LF++ ++ P +Y L D
Sbjct: 285 FRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH--KPDQV-IYITLLDK 341
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G +F+ M+ G + D + L+ + A F ++G+L +
Sbjct: 342 FNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPN 401
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + L+ + G +E L+++++M++ + + ++ F K AV+ +E
Sbjct: 402 LHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFE 461
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ ++G +P V + + + +G +A+ +F +++ G V Y+ M+ Y K G
Sbjct: 462 KMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVG 521
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +A+ L+++M GCEP+V + NSL+D
Sbjct: 522 QVDEAVNLLSEMIRNGCEPDVIVVNSLID 550
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 127/305 (41%), Gaps = 40/305 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KMK+ G D Y +++ F GD + + + E+ D + IL D
Sbjct: 320 FVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA---DGYMPDVVTFTILVDV 376
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ E F M+++GIL + Y +LIC ++ A +L E G+
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPT 436
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-----------------VIV 172
++ + + + G K +E E MK A+ + + ++C +
Sbjct: 437 AYTYITFIDYFGKSGETGKAVETFEKMK-AKGIVPNIVACNASLYSLAEMGRLREAKTMF 495
Query: 173 NG-------------------FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
NG +SK AV + ++I GC P + S+I++ +
Sbjct: 496 NGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKA 555
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G +A ++F M+ VV Y+++++ GK GR++ A+ L M K C PN +
Sbjct: 556 GRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISF 615
Query: 274 NSLMD 278
N+L+D
Sbjct: 616 NTLLD 620
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 147/330 (44%), Gaps = 21/330 (6%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTH 61
+ L + M+S G+ + Y ++ F K G++ K F + +++ + ++ +
Sbjct: 419 EDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNAS 478
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y SL + GR E F ++E G+ D Y ++ ++ + +V A L E
Sbjct: 479 LY-----SLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM 533
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G D+ V L+ + G V++ ++ + MK+ +L+ + +++G K
Sbjct: 534 IRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRV 593
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A++++E +I + C P +++ ++++ +C+ A K+F +M V+ Y+++
Sbjct: 594 QKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTV 653
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ K ++ A ++K K P+ +L L L K + A ++
Sbjct: 654 IYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTL---------LPGLVKCGQIGDAISI 703
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
AR+F V+ FR+N + M G +V
Sbjct: 704 ARDFMYQVR----FRVNRSFWEDLMGGTLV 729
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 7/207 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTH 61
+ + +E+M G + + ++ + KIGD+E LF + E + DL
Sbjct: 910 EEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS---- 965
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL D L +GR E L +F ++K G+ D Y +I ++ A L+ E
Sbjct: 966 -YTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEM 1024
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G++ DL + L+L GMVE+ + E ++ A L ++ G+S
Sbjct: 1025 RNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENP 1084
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIIN 208
A VY+ ++ GC P TYA + N
Sbjct: 1085 EHAYTVYKNMMVDGCNPNIGTYAQLPN 1111
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 16/218 (7%)
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+E EK ++ + MKN +++ K ++Y+++IS+ C P
Sbjct: 799 LEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDA 858
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
+TY +I++ + KA F ++ F Y ++ K GR+ +AMRL +
Sbjct: 859 ITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEE 918
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLR----------------QLEKYTTVISAYNMARE 304
M GC+PN I+N L++ +G+ + L+ YT ++ +A
Sbjct: 919 MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
D + ++NE + G D ++ K ++EE
Sbjct: 979 VDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEE 1016
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 105/260 (40%), Gaps = 19/260 (7%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F M++K I D Y ++ + + ++ + + + G + + + L+ + I+
Sbjct: 145 FEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQ 204
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G + LEV M + L S ++ K+R + + +++ G P T
Sbjct: 205 SGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYT 264
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
+ I R G +A ++F M +G +V Y+ ++ G++ +A L KMK
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMK 324
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVI 322
G +P+ IY +L+D +N + D +F+++ +G +
Sbjct: 325 ANGHKPDQVIYITLLD-------------------KFNDFGDLDTFKEFWSQMEADGYMP 365
Query: 323 DRAMAGIMVGVFSKLSQIEE 342
D I+V V K +E
Sbjct: 366 DVVTFTILVDVLCKARDFDE 385
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 11/274 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKIL 66
+ +M GI D Y I+ +G + LF + E + K D+ Y +
Sbjct: 325 FLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVA-----YNTI 379
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + ++F +M ++GI + Y++++ F ++ ++ A +LFKE + +
Sbjct: 380 IDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNV 439
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAA 184
+ + F LV +EGMV + V E+M K E NI ++NG+ R A
Sbjct: 440 MPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIY--TYNALMNGYCLRCKMNEA 497
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
KV+E ++ +GC P +Y +IN YC KA+ + +M K V Y++++
Sbjct: 498 RKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKG 557
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR+ DA L KM G P + Y+ L++
Sbjct: 558 LCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLN 591
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 139/294 (47%), Gaps = 7/294 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYK 64
+ + +M GI D+ Y I+ +G + LF E K D+ Y
Sbjct: 253 MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVV-----TYN 307
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
I+ DSL K + F +M ++GI D Y +++ + ++ A LFK+ E+K
Sbjct: 308 IIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQK 367
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G D+ + ++ ++ +V +E + M + + + I++GF A
Sbjct: 368 GCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEA 427
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++++++ + +P +T++ +++ C+ G+ S+A VF M +KG + + Y++++
Sbjct: 428 TQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNG 487
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
Y ++ +A ++ M KGC P++ YN L++ + ++ + + + T +S
Sbjct: 488 YCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSV 541
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 124/271 (45%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ + +M GI ++ Y I+ F +G ++ LF E R ++ P+ T + IL
Sbjct: 393 MEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGR--NVMPN-TLTFSIL 449
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L + G E F M EKG+ + Y +L+ + ++ A ++F+ KG
Sbjct: 450 VDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGC 509
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
DL + L+ Y ++K ++ M +L + I+ G A +
Sbjct: 510 APDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQE 569
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++ S G +P +TY+ ++N C+ G +A K+F M++K + ++ Y+ ++
Sbjct: 570 LFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMF 629
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G++ A L +K+ G +P YN ++
Sbjct: 630 IGGKLEVAKGLFSKLSADGIQPPGRTYNVMI 660
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 2/179 (1%)
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
LI + V A ++ + + G+ D+ F L+ EG ++ +E+ M +
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193
Query: 161 LNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
+ D IS ++NG AV V++++ GC P VTY +II++ C+ L + A
Sbjct: 194 -HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
EM +G + Y+S+V G++ +A RL +M+ GC+P+V YN ++D
Sbjct: 253 MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIID 311
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M + GI D + +LI + ++KVA EL+ E G D+ + L+ G
Sbjct: 154 MFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGN 213
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+ V + M+ + I++ K R A+ +++ +G P +TY S
Sbjct: 214 TNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNS 273
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
I++ C +G ++A ++F M+Q G VV Y+ ++ K + DA +++M +G
Sbjct: 274 IVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQG 333
Query: 266 CEPNVWIYNSLMDMHG 281
P+V Y ++ +HG
Sbjct: 334 IPPDVVTYTTI--LHG 347
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y IL + S R + M K + + Y +++ + + A+ELFK+
Sbjct: 514 HSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKK 573
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
GML L + L+ + G +++ L++ +SMK +L + +++ G
Sbjct: 574 MCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGK 633
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
A ++ +L + G P TY +I + GL +A ++F
Sbjct: 634 LEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 5/153 (3%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSL 70
+M + ++ Y IM+ +G LF + C S L + Y IL + L
Sbjct: 538 QMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGML----PTLMTYSILLNGL 593
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G E LK F+ MKEK + D +Y LI +++VA+ LF + G+
Sbjct: 594 CKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPG 653
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI 163
+ ++ ++EG+ ++ E+ K + N+
Sbjct: 654 RTYNVMIKGLLKEGLSDEAYELFRKWKMMKHNV 686
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + IL ++L K G L+ F +MK G D Y +LI + S+ ++ A +L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
K+ E G R + ++ ++ +E+ EV + M ++ + +++G K
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 508
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A + Q+IS+G P +TY SI+ YC+ G KA + M GF+ VV
Sbjct: 509 DKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
Y +++ K GR + A++++ M+ KG P YN ++ R N+R
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ T +Y L + L + + + + +M +GI D + +L+ + +V+ A +
Sbjct: 144 ADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLM 203
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+E +G+ D F L+ ++EEG +E L V M + + V++NG+ K
Sbjct: 204 LEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCK 263
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A+ +Q I+ G P Q+TY + +N C+ A KV M Q+G D V
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y+ +V K G++ +A ++ +M +GC P++ +N+L+
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 113/236 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ + L K+G+ E M ++G L D + + +LI + + ++ A +L ++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ F L+ + G L + E MKN+ + +++
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + + + S GC +TY +II+ C+ +AE+VF +M +G + + +++++
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
K +I DA L+ +M +G +PN YNS++ + + ++++ ++A
Sbjct: 504 DGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 9/273 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ G+ D + ++ A K+GD LF E ++ TP Y
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC--TPDEV-TY 429
Query: 64 KILCD---SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
L D SLGK G+A ++LK DM+ G Y ++I ++ AEE+F +
Sbjct: 430 NTLIDNLCSLGKLGKALDLLK---DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ +G+ R+ F L+ ++ ++ ++ M + L ++ I+ + K+
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGD 546
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A + E + + G VTY ++IN C+ G A KV M+ KG AY+
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
++ + IRDA+ L +M G P+ Y
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 639
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L +L R E L R + KG+ D + LI + + + +A LF+E +
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G D + L+ G + K L++++ M++ S I++G K+
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +V++Q+ QG +T+ ++I+ C+ A + +M +G + Y+S++
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSIL 538
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y K G I+ A ++ M G E +V Y +L++
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLIN 574
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 90 GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKT 149
GI D VY L+ +++K+ E ++ E +G+ D+ F L+ V
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 150 LEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
+ ++E M + + + ++ GF + + AA++V +++ GC +VT +IN
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Query: 210 YCRIGLYSKAEKVFIEMQQK---GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
YC++G + E +QQ+ GF+ + Y++ V + + A++++ M +G
Sbjct: 261 YCKLG---RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Query: 267 EPNVWIYN 274
+P+V+ YN
Sbjct: 318 DPDVFTYN 325
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 97/261 (37%), Gaps = 39/261 (14%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +E+MK++G D Y +++ +G K L + ES P ST Y +
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG---CPRSTITYNTI 467
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K R E + F M +GI + + +LI ++ A L + +G+
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGL 527
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + ++ Y ++G ++K +++E+M + ++NG K A+K
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587
Query: 187 V-----------------------------------YEQLISQGCIPGQVTYASIINAYC 211
V + ++ G P +TY + C
Sbjct: 588 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 647
Query: 212 R-IGLYSKAEKVFIEMQQKGF 231
R G +A +EM KGF
Sbjct: 648 RGGGPIKEAFDFMLEMVDKGF 668
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 7/307 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++KM G + Y ++ K+G++ AA+ L + + P +Y +
Sbjct: 146 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS--AAIRLLRSMEQGNCQPDVV-IYTSI 202
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + E F M +GI D Y SL+ + ++ E K L + +
Sbjct: 203 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI 262
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L D+ +F +V +EG V + E+V+ M + +++G + AVK
Sbjct: 263 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 322
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++ ++ +G P ++Y ++IN YC+I KA +F EM +K + Y++++
Sbjct: 323 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLC 382
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
GR++DA+ L +M +G P++ Y+ L+D + +L + I A N+ +
Sbjct: 383 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPD-- 440
Query: 307 MCVKFYN 313
++ YN
Sbjct: 441 --IQVYN 445
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 117/277 (42%), Gaps = 22/277 (7%)
Query: 57 PSSTHMYKILCDS---LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
P + + IL +S L + G AF +L + + G DP+ + +LI ++
Sbjct: 88 PPNVYTLNILINSFCHLNRVGFAFSVLA---KILKLGHQPDPTTFTTLIRGLCVEGKIGE 144
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A LF + ++G ++ + L+ + G + ++ SM+ I I++
Sbjct: 145 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 204
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
K R A ++ Q++ QG P TY S+++A C + + + +M
Sbjct: 205 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 264
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-- 291
VV +S++V K G++ +A +V M +G EP+V Y +LMD H + + K
Sbjct: 265 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 324
Query: 292 --------------YTTVISAYNMAREFDMCVKFYNE 314
YTT+I+ Y + D + + E
Sbjct: 325 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEE 361
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 101/217 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K + + + F +M K + D Y +L+ + ++ A LF E
Sbjct: 339 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMV 398
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G + DL + L+ + +E+ + ++++++ + LN + +I++G +
Sbjct: 399 ARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELE 458
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AA ++ L S+G P TY +I+ C+ GL ++A K+F+EM Y+++
Sbjct: 459 AARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIA 518
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ + A++L+ +M +G +V L++M
Sbjct: 519 RGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEM 555
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 99/241 (41%), Gaps = 5/241 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCD 68
++ M G D Y ++ + KI +K LF E C + T Y L
Sbjct: 324 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI----PDTKTYNTLMH 379
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L GR + + F +M +G + D Y+ L+ S ++ A L K E +
Sbjct: 380 GLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNP 439
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D++V+ ++ G +E ++ ++ + L+ S ++++G KR A K++
Sbjct: 440 DIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLF 499
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ C P TY +I + + +A ++ EM +GF V + +V M
Sbjct: 500 MEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDD 559
Query: 249 G 249
G
Sbjct: 560 G 560
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ +K + Y + + Q+ S G P T +IN++C + A V ++ + G
Sbjct: 62 LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLG 121
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+++++ G+I +A+ L KM +G +PNV Y +L++
Sbjct: 122 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLIN 169
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 132/271 (48%), Gaps = 5/271 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y +M ++G+ +D Y ++ G+ + AL + + P + ++Y +L +
Sbjct: 405 YLIEMSTSGLEVDMISYGALIHGLVVAGEVD--TALTIRDRMMNRGILPDA-NIYNVLMN 461
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K G+ +M ++ I D VYA+L+ F + A++LF+ EKG+
Sbjct: 462 GLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDP 521
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKV 187
+ + ++ + + GM++ + ++ M+ A ++ D + I++G+ K+ A +K+
Sbjct: 522 GVVGYNVMIKGFSKSGMMDNAILCIDKMRRAH-HVPDIFTFSTIIDGYVKQHNMNAVLKI 580
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ ++ Q C P VTY S+IN YCR G AEK+F M+ G VV YS ++ + K
Sbjct: 581 FGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCK 640
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ A+ M C PN ++ L++
Sbjct: 641 EAKLGKAVSYFELMLINKCTPNDAAFHYLVN 671
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 166/388 (42%), Gaps = 54/388 (13%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S ++K+K G + + ++ F K+G E + L LE + R L + + MY
Sbjct: 260 ESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSV---NVQMY 316
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ D+ K G + ++M E D Y +LI F S EV+ AE+L ++
Sbjct: 317 NNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIR 376
Query: 124 KGMLRDLEVFLKLVLMYIEEGM-----------------------------------VEK 148
+G+ + + LV Y ++G V+
Sbjct: 377 RGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDT 436
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
L + + M N + I V++NG K+ A + +++ Q P YA++++
Sbjct: 437 ALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVD 496
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+ R G +A+K+F + +KG D VV Y+ M+ + K+G + +A+ + KM+ P
Sbjct: 497 GFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVP 556
Query: 269 NVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFY 312
+++ +++++D + + N+ + K YT++I+ Y E M K +
Sbjct: 557 DIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLF 616
Query: 313 NEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
+ R +G I++G F K +++
Sbjct: 617 SMMRSHGLKPSVVTYSILIGSFCKEAKL 644
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D K G K F+ +K KG + + SL+ F + + + L E +
Sbjct: 246 YNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMK 305
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G+ +++++ ++ + G K + ++ M ++N F R
Sbjct: 306 DRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVE 365
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K+ EQ I +G P ++TY +++ YC+ G Y+KA IEM G + +++Y +++
Sbjct: 366 EAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALI 425
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G + A+ + +M +G P+ IYN LM+
Sbjct: 426 HGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMN 461
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 75 RAFEILKF-FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE-KGMLRDLEV 132
R F ++F +MK K + + ++C++A + V A E++ + L
Sbjct: 112 RVFPEIEFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYA 171
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI----SCVIVNGFSKRRAYWAAVKVY 188
L+ + ++ +E ++ + M + + C+ + ++V G + +K+
Sbjct: 172 CNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLI 231
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E +GC+P V Y ++I+ YC+ G A K+F +++ KGF + + S+V + K
Sbjct: 232 ESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKM 291
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G L+ +MK +G NV +YN+++D
Sbjct: 292 GMFEAIDLLLLEMKDRGLSVNVQMYNNIID 321
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 116/259 (44%), Gaps = 22/259 (8%)
Query: 95 PSVYA--SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE----EGMVEK 148
PS YA SL+ ++ A +L+ E ++ D+ V + ++ +G +E
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIED 226
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
++++ES + +++G+ K+ +A K++++L +G IP T+ S++N
Sbjct: 227 GIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVN 286
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+C++G++ + + +EM+ +G V Y++++ K G A + +M CEP
Sbjct: 287 GFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEP 346
Query: 269 NVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFY 312
++ YN+L++ + + EK YT ++ Y E+ +
Sbjct: 347 DLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYL 406
Query: 313 NEFRMNGGVIDRAMAGIMV 331
E +G +D G ++
Sbjct: 407 IEMSTSGLEVDMISYGALI 425
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 24/165 (14%)
Query: 184 AVKVYEQLIS-QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM--QQKGFDKCVVAYSS 240
A++VY ++ +P S++N + A +++ EM + G D CV Y++
Sbjct: 152 ALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTT 211
Query: 241 MVAMYGK--TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
+ + G GRI D ++L+ KGC PN+ YN+L+D
Sbjct: 212 SIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLID-------------------G 252
Query: 299 YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
Y E + K + + +M G + G +V F K+ E +
Sbjct: 253 YCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAI 297
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/264 (16%), Positives = 101/264 (38%), Gaps = 17/264 (6%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M I D+ Y +++ F + G+ ++ LF + LD P Y ++
Sbjct: 478 EMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLD--PGVVG-YNVMIKGFS 534
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
KSG + M+ + D ++++I + + ++F ++ ++
Sbjct: 535 KSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVV 594
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ Y +G + ++ M++ L S +++ F K AV +E +
Sbjct: 595 TYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELM 654
Query: 192 ISQGCIPGQVTYASIINAYCRI----------GLYSKA----EKVFIEMQQKGFDKCVVA 237
+ C P + ++N + L+ + E F M G+ + A
Sbjct: 655 LINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAA 714
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKM 261
Y+ ++ + ++ A++L KM
Sbjct: 715 YNCILICLCQQRMVKTALQLRNKM 738
>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 600
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 124/297 (41%), Gaps = 10/297 (3%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + + +K G DS I K+G S + + E + +L ++
Sbjct: 168 NVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTA-- 225
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D L K G FE L F M KGI D Y LI + K A L
Sbjct: 226 -YSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANM 284
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
KG++ D++ F + + + GM+ + + M + + I+
Sbjct: 285 MRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQM 344
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A++V++ +IS+GC+P VTY S+I+ +C +KA EM G D VV +S++
Sbjct: 345 KDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTL 404
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNL-RQLEK 291
+ K G+ A L M G PN+ ++D H A +L R+LEK
Sbjct: 405 IGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEK 461
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 1/237 (0%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
K+ + PS + + + L G + ++F +K+ G D ++ +
Sbjct: 146 KIGVEPSIV-TFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHS 204
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A K+ EEK D+ + +V ++GMV + L + M + +
Sbjct: 205 SAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCL 264
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++G + A + ++ +G +P T+ I + + G+ S+A+ +F M G
Sbjct: 265 IHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGI 324
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ VV Y+S++ + +++DAM + M KGC PN+ Y SL+ KN+ +
Sbjct: 325 EHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNK 381
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 122/321 (38%), Gaps = 38/321 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ + +M GI D Y ++ D K AA L RK + P + ++
Sbjct: 243 LNLFSQMTGKGIQPDLFTYNCLIHGLCNF-DRWKEAAPLLANMMRK-GIMPD-VQTFNVI 299
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
K+G F M GI D Y S+I + + ++K A E+F KG
Sbjct: 300 AGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGC 359
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L ++ + L+ + E + K + + M N L+ + ++ G K AA +
Sbjct: 360 LPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKE 419
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ------------------ 228
++ + G +P T A I++ + +S+A +F E+++
Sbjct: 420 LFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMC 479
Query: 229 -----------------KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
KG VV Y+ M+ K G + DA L+ KM+ GC PN
Sbjct: 480 SSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNEC 539
Query: 272 IYNSLMDMHGRAKNLRQLEKY 292
YN + R + + KY
Sbjct: 540 TYNVFVQGLLRRYQISKSTKY 560
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 93/213 (43%), Gaps = 4/213 (1%)
Query: 82 FFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
F +M G+ DP+V +++LI + A+ELF + G L +L+ ++
Sbjct: 385 FLGEMVNNGL--DPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDG 442
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ + + + ++ +++ I +I++G A++++ L S+G
Sbjct: 443 LFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKID 502
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY +I C+ GL AE + ++M++ G Y+ V + +I + + +
Sbjct: 503 VVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLM 562
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
MK KG + + L++ K R LE +
Sbjct: 563 FMKDKGFQADATTTKFLINYFSANKENRALEVF 595
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 150/338 (44%), Gaps = 23/338 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M++ GI G Y +++ D KV A+F E +S+ L + Y + ++ +
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLS---GDVYFYSSVINAYCR 260
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G + F + GI + Y +LI F I +++ AE L + + +G+ + V
Sbjct: 261 AGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIV 320
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F ++ Y + MV+K LE+ M+ + + + G + A + +I
Sbjct: 321 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 380
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P V+Y ++I+ +C G +A ++F EM G + +V Y+ M+ Y K G IR
Sbjct: 381 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 440
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------LRQLEK------------YTT 294
+A R +M+ KG P+++ Y +L +HG N LR E+ YT
Sbjct: 441 EAERFKKEMEKKGLVPDIYSYAAL--VHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTA 498
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
+IS + + Y+ +G D A+ +VG
Sbjct: 499 LISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVG 536
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 117/270 (43%), Gaps = 38/270 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ +++ CY +++A+ + D ++VA + E+ ++ T + Y IL D L
Sbjct: 167 DEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGT---YTILVDGL 223
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ ++ F +MK K + D Y+S+I ++ V+ A E+F E G+ +
Sbjct: 224 SAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNE 283
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ NGF K AA +
Sbjct: 284 HTYGALI-----------------------------------NGFCKIGQMEAAEMLVTD 308
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G Q+ + ++I+ YCR + KA ++ + M++ G + V Y+++ + R
Sbjct: 309 MQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANR 368
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ +A L+ M KG PN Y +L+ +H
Sbjct: 369 MDEAKNLLRIMIEKGVRPNHVSYTTLISIH 398
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 1/192 (0%)
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
P + ++ + V A +L E G+ + + L+ Y E ++ E+++
Sbjct: 143 PLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLK 202
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M+N + + ++V+G S R V+E++ S+ Y+S+INAYCR G
Sbjct: 203 VMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAG 262
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A +VF E G + Y +++ + K G++ A LV M+ +G N ++N
Sbjct: 263 NVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFN 322
Query: 275 SLMDMHGRAKNL 286
+++D + R KN+
Sbjct: 323 TMIDGYCR-KNM 333
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
Query: 156 MKNAELNISDCIS----CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+K A + D ++ V+V+G+ K A ++ +++ G + Y S+++AY
Sbjct: 130 LKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYT 189
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
R + ++ M+ +G + V Y+ +V I + +MK K +V+
Sbjct: 190 REKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVY 249
Query: 272 IYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
Y+S+++ + RA N+R+ + FD CV NG + G ++
Sbjct: 250 FYSSVINAYCRAGNVRRASEV------------FDECVG-------NGIEPNEHTYGALI 290
Query: 332 GVFSKLSQIE 341
F K+ Q+E
Sbjct: 291 NGFCKIGQME 300
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 4/285 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + KMK + + ++ F ++G ++ + F + + + Y I+
Sbjct: 83 LQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAG---SKPTVFTYNIM 139
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D + K G F +MK +G++ D Y S+I + + + F+E +
Sbjct: 140 IDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSC 199
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ + + G + K LE MK + L + +V+ F K A+K
Sbjct: 200 EPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALK 259
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
Y + G +P + TY S+++AYC+IG S A ++ EM Q G + VV Y++++
Sbjct: 260 FYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLC 319
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLE 290
RI++A L KM G PN+ Y +L+ +AKN+ R LE
Sbjct: 320 DVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALE 364
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 130/292 (44%), Gaps = 16/292 (5%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + G+ + +FF+DM G Y +I +++ A LF+E + +G
Sbjct: 104 LLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRG 163
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
++ D + ++ Y + G ++ T+ E MK+ ++N F K +
Sbjct: 164 LIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGL 223
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ + ++ G P V+Y+++++A+C+ + +A K +++M++ G Y+S+V Y
Sbjct: 224 EFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAY 283
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------------MHGR---AKNLRQL 289
K G + DA RL +M G E NV Y +L+D + G+ A + L
Sbjct: 284 CKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNL 343
Query: 290 EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
YT +I + A+ D ++ +E + G D + G + L +IE
Sbjct: 344 ASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIE 395
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 134/276 (48%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MK G++ D+ Y +++ + K+G + F E +S + P Y L +
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS--MSCEPDVI-TYNTLINC 212
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G+ + L+FFR+MK+ G+ + Y++L+ +F ++ A + + + G++ +
Sbjct: 213 FCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPN 272
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ LV Y + G + + + M + + +++G A +++
Sbjct: 273 EHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFG 332
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++++ G IP +Y ++I+ + + +A ++ EM+ +G ++ Y + +
Sbjct: 333 KMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLE 392
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+I A ++ +M+ KG + N +IY +LMD + +++N
Sbjct: 393 KIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSEN 428
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-IVNGFSKRRAYWAAVKVYEQ 190
VF L + IEE M E+ L+ MK + SC +++ F++ + ++
Sbjct: 65 VFDALFSVLIEEDMFEEALQCFSKMKRCRV-FPKTRSCNGLLHKFARLGKTDGMKRFFKD 123
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I G P TY +I+ C+ G A +F EM+ +G V Y+SM+ YGK GR
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK---------YTT 294
+ D + +MK CEP+V YN+L++ + L R++++ Y+T
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYST 243
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++ A+ +KFY + R G V + +V + K+ + +
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSD 291
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 134/341 (39%), Gaps = 42/341 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ +MK +G+ + Y +++AF K + AL + R+L L P+ H Y L
Sbjct: 223 LEFFREMKQSGLKPNVVSYSTLVDAFCK--EDMMQQALKFYVDMRRLGLVPNE-HTYTSL 279
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K G + + +M + G+ + Y +LI + +K AEELF + G+
Sbjct: 280 VDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGV 339
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ +L + L+ +++ +++ LE+++ MK + + + AA
Sbjct: 340 IPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKV 399
Query: 187 VYEQLISQGCIPGQ-----------------------------------VTYASIINAYC 211
V ++ +G VT+ +I+ C
Sbjct: 400 VMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLC 459
Query: 212 RIGLYSKAEKVFIEMQQK-GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ L SKA F + G Y++M+ K ++ A L +M KG P+
Sbjct: 460 KNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDR 519
Query: 271 WIYNSLMDMHGRAKNLRQ---LEKYTTVISAYNMAREFDMC 308
Y SL+D + N+ Q L I + AR D+C
Sbjct: 520 TAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGARFGDLC 560
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 129/298 (43%), Gaps = 35/298 (11%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGD-------SEKVAALFLE--------- 47
Q L +Y M+ G+V + Y +++A+ KIG+ +++++ + +E
Sbjct: 255 QQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTAL 314
Query: 48 ----CESRKL-------------DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKG 90
C+ ++ + P+ Y L K+ L+ +MK +G
Sbjct: 315 IDGLCDVERIKEAEELFGKMVTAGVIPNLA-SYTALIHGFVKAKNMDRALELLDEMKGRG 373
Query: 91 ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
I D +Y + I S + +++ A+ + E +EKG+ + ++ L+ Y + + L
Sbjct: 374 IKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGL 433
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ-GCIPGQVTYASIINA 209
++E M ++ ++ CV+++G K + A+ + ++ + G Y ++I+
Sbjct: 434 HLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDG 493
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
C+ A +F +M QKG AY+S++ K G + A+ L KM G E
Sbjct: 494 LCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVE 551
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 145/309 (46%), Gaps = 11/309 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++KM G + Y ++ K+G++ AA+ L + + P +Y +
Sbjct: 155 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS--AAIRLLRSMEQGNCQPDVV-IYTSI 211
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + E F M +GI D Y SL+ + ++ E K L + +
Sbjct: 212 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI 271
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L D+ +F +V +EG V + E+V+ M + +++G + AVK
Sbjct: 272 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 331
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++ ++ +G P ++Y ++IN YC+I KA +F EM +K + Y+++ MYG
Sbjct: 332 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL--MYG 389
Query: 247 --KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
GR++DA+ L +M +G P++ Y+ L+D + ++L + I A N+ +
Sbjct: 390 LCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPD 449
Query: 305 FDMCVKFYN 313
++ YN
Sbjct: 450 ----IQVYN 454
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 117/277 (42%), Gaps = 22/277 (7%)
Query: 57 PSSTHMYKILCDS---LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
P + + IL +S L + G AF +L + + G DP+ + +LI ++
Sbjct: 97 PPNVYTLNILINSFCHLNRVGFAFSVLA---KILKLGHQPDPTTFTTLIRGLCVEGKIGE 153
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A LF + ++G ++ + L+ + G + ++ SM+ I I++
Sbjct: 154 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 213
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
K R A ++ Q++ QG P TY S+++A C + + + +M
Sbjct: 214 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 273
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-- 291
VV +S++V K G++ +A +V M +G EP+V Y +LMD H + + K
Sbjct: 274 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 333
Query: 292 --------------YTTVISAYNMAREFDMCVKFYNE 314
YTT+I+ Y + D + + E
Sbjct: 334 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEE 370
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 95/203 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K + + + F +M K + D Y +L+ + ++ A LF E
Sbjct: 348 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMV 407
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G + DL + L+ + +E+ + ++++++ + LN + +I++G +
Sbjct: 408 ARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELE 467
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AA ++ L S+G P TY +I+ C+ GL ++A K+F+EM Y+++
Sbjct: 468 AARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIA 527
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ + A++L+ +M +G
Sbjct: 528 RGFLQNNETLRAIQLLEEMLARG 550
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E +K F M KG D Y +LI + I ++ A LF+E K + D + + L+
Sbjct: 328 EAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLM 387
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGC 196
G ++ + + M A + D ++ ++++ K R A+ + + + +
Sbjct: 388 YGLCHVGRLQDAIALFHEMV-ARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNL 446
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P Y II+ CR G A +F + KG V Y+ M+ K G + +A +
Sbjct: 447 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 506
Query: 257 LVAKMKPKGCEPNVWIYNSL 276
L +M C P+ YN++
Sbjct: 507 LFMEMDGNDCSPDGCTYNTI 526
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 7/235 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCD 68
++ M G D Y ++ + KI +K LF E C + T Y L
Sbjct: 333 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI----PDTKTYNTLMY 388
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L GR + + F +M +G + D Y+ L+ S ++ A L K E +
Sbjct: 389 GLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNP 448
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D++V+ ++ G +E ++ ++ + L+ S ++++G KR A K++
Sbjct: 449 DIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLF 508
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVAYSSM 241
++ C P TY +I + + +A ++ EM +GF D C + S +
Sbjct: 509 MEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSCFLMLSVL 563
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ +K + Y + + Q+ S G P T +IN++C + A V ++ + G
Sbjct: 71 LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLG 130
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+++++ G+I +A+ L KM +G +PNV Y +L++
Sbjct: 131 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLIN 178
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 144/302 (47%), Gaps = 15/302 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++++M S V+ Y ++ + G+ E L E ++ L+ S+ +Y +
Sbjct: 277 HFDEMSSPPDVV---TYGTMVHGYCVRGELENAVKLLDEMAAKGLE---SNATVYTSVIA 330
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L G+ + L+ DM G+ D V+ ++I F S ++ A LF+E +++G+
Sbjct: 331 LLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAA 390
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D L+ G +++ V++ M + L++ V+++G+ KR A +V+
Sbjct: 391 DRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVH 450
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ + P VTY ++ + C+ G A ++ EM KG + V Y+S++ K
Sbjct: 451 NEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKF 510
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM------HGRAKNLRQ--LEK-YTTVISAY 299
G + AMR++ +M+ G +V+ Y +L+D RA N+ Q L+K I+ Y
Sbjct: 511 GNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATY 570
Query: 300 NM 301
N+
Sbjct: 571 NV 572
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 3/281 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L E M G+ LD+ + ++ F GD LF E + R L + + L
Sbjct: 342 LRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLA---ADRVTHTAL 398
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L ++G E + ++M +KG+ D Y LI + + A + E + +
Sbjct: 399 INGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRV 458
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L ++G V E++ M N L ++ ++NG K A++
Sbjct: 459 APNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMR 518
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ + G TY ++I+ C+ G + +A + EM KG + Y+ ++ +
Sbjct: 519 IMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFC 578
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+GR+ +L+ M K PNV YNSLM + KN++
Sbjct: 579 MSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMK 619
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 16/243 (6%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+K +M KG+ + +VY S+I + +V A + ++ G+ D VF ++
Sbjct: 307 VKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISG 366
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ +G + + E M+ L ++NG + A +V ++++ +G
Sbjct: 367 FCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVD 426
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY +I+ YC+ G +A +V EM + VV Y+++ K G +R A L+
Sbjct: 427 VVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLH 486
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAR 303
+M KG E NV+ YNSL++ + NL Q + YTT+I +
Sbjct: 487 EMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSG 546
Query: 304 EFD 306
EFD
Sbjct: 547 EFD 549
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 15/268 (5%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y + + K GD L E ++ L+L + + Y L + L K G + ++
Sbjct: 465 YTALSDGLCKQGDVRAANELLHEMCNKGLEL---NVYTYNSLINGLCKFGNLEQAMRIMT 521
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M+ G D Y +LI + E A + +E +KG+ + + L+ + G
Sbjct: 522 EMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSG 581
Query: 145 MVEKTLEVVESM--KNAELNISDCISCVIVNGFSKR----RAYWAAVKVYEQLISQGCIP 198
VE +++E M KN N+ V N K+ + + ++Y+ + SQ P
Sbjct: 582 RVEGGKKLLEWMLEKNVRPNV------VTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAP 635
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
+ TY +I +C+ +A EM +KG +YS+++ + K + +A
Sbjct: 636 NENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFF 695
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
KM+ +G +Y+ MD+ NL
Sbjct: 696 DKMRNEGLTAEPDVYSFYMDISFNEDNL 723
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 105/231 (45%), Gaps = 7/231 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECES--RKLDLTPSSTHMYKILCD 68
+M + G+ L+ Y ++ K G+ E+ + E E+ + D+ + Y L D
Sbjct: 486 HEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDV-----YTYTTLID 540
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+L KSG ++M +KGI + Y L+ F V+ ++L + EK +
Sbjct: 541 TLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRP 600
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + L+ Y + ++ T E+ + M + E+ ++ +++ G K R A+ +
Sbjct: 601 NVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFH 660
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+++I +G +Y+++I + +S+A F +M+ +G YS
Sbjct: 661 QEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYS 711
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 44/310 (14%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYK 64
LH+++K+ + G L+ Y ++ KIGD+ + A FL RK+D LT MY
Sbjct: 149 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDT-RAAIKFL----RKIDGRLTKPDVVMYN 203
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ D++ K E F +M KGI D Y +LI F + ++K A L E K
Sbjct: 204 TIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLK 263
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS---------------- 168
+ ++ + LV +EG V++ V+ M A + D I+
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK-PDVITYSTLMDGYFLVYEVKK 322
Query: 169 --------------------CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+++NGF K + A+ +++++ + +PG VTY+S+I+
Sbjct: 323 AQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
C+ G S + EM+ +G V+ YSS++ K G + A+ L KMK + P
Sbjct: 383 GLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRP 442
Query: 269 NVWIYNSLMD 278
N++ + L+D
Sbjct: 443 NIFTFTILLD 452
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 17/303 (5%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP KIL DS K + ++ KGI D LI F + ++
Sbjct: 56 TPPIIQFNKIL-DSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ + ++G D L+ +G V+K L + + ++ ++NG
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 174
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K AA+K ++ + P V Y +II+A C+ L S+A +F EM KG V
Sbjct: 175 CKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADV 234
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQLE-- 290
V Y++++ + G++++A+ L+ +M K PNV+ YN L+D G+ K + +
Sbjct: 235 VTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 291 -----------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
Y+T++ Y + E +N + G D I++ F K
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354
Query: 340 IEE 342
++E
Sbjct: 355 VDE 357
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 129/304 (42%), Gaps = 40/304 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M GI D Y ++ F +G ++ L E + ++ + + Y IL D+
Sbjct: 222 FSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTIN---PNVYTYNILVDA 278
Query: 70 LGKSGRA--------------------------------FEILK---FFRDMKEKGILED 94
L K G+ +E+ K F M G+ D
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y LI F V A LFKE +K M+ + + L+ + G + ++++
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLID 398
Query: 155 SMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M++ +D I+ +++G K A+ ++ ++ Q P T+ +++ C+
Sbjct: 399 EMRDRG-QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG 457
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G A++VF ++ KG+ V Y+ M+ + K G + +A+ +++KM+ GC PN + +
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 517
Query: 274 NSLM 277
+++
Sbjct: 518 ETII 521
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 113/253 (44%), Gaps = 3/253 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M A + D Y +M+ ++ + + +K +F + +TP H Y IL + K
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF--NAMSLMGVTPD-VHTYTILINGFCK 351
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ E L F++M +K ++ Y+SLI + +L E ++G D+
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVIT 411
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + G +++ + + MK+ E+ + ++++G K A +V++ L+
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLL 471
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
++G TY +IN +C+ GL +A + +M+ G + +++ K
Sbjct: 472 TKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEND 531
Query: 253 DAMRLVAKMKPKG 265
A +L+ +M +G
Sbjct: 532 KAEKLLRQMIARG 544
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 150/338 (44%), Gaps = 23/338 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M++ GI G Y +++ D KV A+F E +S+ L + Y + ++ +
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLS---GDVYFYSSVINAYCR 260
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G + F + GI + Y +LI F I +++ AE L + + +G+ + V
Sbjct: 261 AGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIV 320
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F ++ Y + MV+K LE+ M+ + + + G + A + +I
Sbjct: 321 FNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMI 380
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P V+Y ++I+ +C G +A ++F EM G + +V Y+ M+ Y K G IR
Sbjct: 381 EKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIR 440
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------LRQLEK------------YTT 294
+A R +M+ KG P+++ Y +L +HG N LR E+ YT
Sbjct: 441 EAERFKNEMEKKGLVPDIYSYAAL--VHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTA 498
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
+IS + + Y+ +G D A+ +VG
Sbjct: 499 LISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVG 536
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 117/270 (43%), Gaps = 38/270 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ +++ CY +++A+ + D ++VA + E+ ++ T + Y IL D L
Sbjct: 167 DEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGT---YTILVDGL 223
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ ++ F +MK K + D Y+S+I ++ V+ A E+F E G+ +
Sbjct: 224 SAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNE 283
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ NGF K AA +
Sbjct: 284 HTYGALI-----------------------------------NGFCKIGQMEAAEMLVTD 308
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G Q+ + ++I+ YCR + KA ++ + M++ G + V Y+++ + R
Sbjct: 309 MQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANR 368
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ +A L+ M KG PN Y +L+ +H
Sbjct: 369 MDEAKNLLRIMIEKGVRPNHVSYTTLISIH 398
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 1/192 (0%)
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
P + ++ + V A +L E G+ + + L+ Y E ++ E+++
Sbjct: 143 PLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLK 202
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M+N + + ++V+G S R V+E++ S+ Y+S+INAYCR G
Sbjct: 203 VMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAG 262
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A +VF E G + Y +++ + K G++ A LV M+ +G N ++N
Sbjct: 263 NVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFN 322
Query: 275 SLMDMHGRAKNL 286
+++D + R KN+
Sbjct: 323 TMIDGYCR-KNM 333
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
Query: 156 MKNAELNISDCIS----CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+K A + D ++ V+V+G+ K A ++ +++ G + Y S+++AY
Sbjct: 130 LKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYT 189
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
R + ++ M+ +G + V Y+ +V I + +MK K +V+
Sbjct: 190 REKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVY 249
Query: 272 IYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
Y+S+++ + RA N+R+ + FD CV NG + G ++
Sbjct: 250 FYSSVINAYCRAGNVRRASEV------------FDECVG-------NGIEPNEHTYGALI 290
Query: 332 GVFSKLSQIE 341
F K+ Q+E
Sbjct: 291 NGFCKIGQME 300
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 17/276 (6%)
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
+FR + K L+ S Y ++I A + A ELF+E + G ++ + ++ +
Sbjct: 96 YFRAVTPKASLDVIS-YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLL 154
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ G +E L+ E M + + V+++G K + A KV+EQ++ +GC+P +
Sbjct: 155 KAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTI 214
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY ++I+ + + +A K+ M KG + V Y S+V + K I +A ++A+M
Sbjct: 215 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 274
Query: 262 KPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK-------------YTTVISAYNMAREF 305
+ +GCEP ++I+ SL+ + GRA+ Q+ YT++I
Sbjct: 275 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRV 334
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
++ G D G ++ FSK+ +E
Sbjct: 335 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 370
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 3/279 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E++K+AG + Y +++ K G E F E P+ T Y ++ D
Sbjct: 131 FEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSC--VPTRT-TYTVVIDG 187
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ + K F M +KG + D Y +LI F+ +++ A +L KG
Sbjct: 188 LCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPT 247
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ +V + + M+ + EV+ M+ I +++ + + A +V
Sbjct: 248 AVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLT 307
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ ++GC P + Y S+I+ G +A VF M +KG + Y +++ + K G
Sbjct: 308 EMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIG 367
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ A ++ M G P+ + YNSLMD + + + + Q
Sbjct: 368 NVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ 406
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 6/230 (2%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
T Y L D K+ + E K M KG Y S++ F + + A+E+
Sbjct: 211 PDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEV 270
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI--SCVIVNGF 175
+ E+G L +F L+ Y+ +G E+ +V+ M A D I + +I F
Sbjct: 271 IAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM-TARGCAPDVILYTSLIDLLF 329
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
S R A V++ +I +GC P +TY +II + +IG A ++ M + G
Sbjct: 330 STGRVPEAR-HVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC 388
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
AY+S++ Y K R+ A + +M G +PN +N L MHG K+
Sbjct: 389 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL--MHGLFKD 436
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 1/217 (0%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L D L +GR E F M EKG D Y ++I +F+ I V+ A E+ +
Sbjct: 320 LYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELM 379
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G+ D + L+ Y++ V++ V + M + + + V+++G K
Sbjct: 380 AKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKT 439
Query: 182 WAAVKVYEQLISQGCIPGQ-VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A ++++++ + +P V+Y +I+ + G S+A F EM +G Y+S
Sbjct: 440 DRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTS 499
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ K GRI +A +LV M G P+V Y++L+
Sbjct: 500 LIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALI 536
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 7/188 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M ++GI ++ + +M +K G +++ +LF E + + P + Y IL D
Sbjct: 411 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK--EEVPPTLVSYTILIDG 468
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LGK+GR E F++M ++GI+ + Y SLI S A + A++L ++ + G+ D
Sbjct: 469 LGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPD 528
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF--SKRRAYWAAVKV 187
++ + L+ I+ MV+ +V + M ++ V+ GF + R AVK
Sbjct: 529 VQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVK- 587
Query: 188 YEQLISQG 195
Q SQG
Sbjct: 588 --QHFSQG 593
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
GC P V+Y ++I+ I +A K F M G + V+A+++++ + K G+ +
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR-------------QLEKYTTVISAYNM 301
+L+ + K P+V++Y S++ + +A +L + YTTVI
Sbjct: 62 HKLLNQAL-KRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120
Query: 302 AREFDMCVKFYNEFRMNG 319
++ D + + E + G
Sbjct: 121 SKRIDEACELFEELKTAG 138
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 139/307 (45%), Gaps = 13/307 (4%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S + +MK G+ + Y ++ F+K+ + LF E + Y
Sbjct: 244 SAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLF---EEMRHQYCRPDVFTYT 300
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L LGK+GR E FF +M+ +G D V ++I + A +LF+E
Sbjct: 301 ELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTL 360
Query: 125 GMLRDLEVFLKLV-LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + + ++ ++ + + + E MK + ++ S ++++GF K
Sbjct: 361 QCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEK 420
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ + E++ +G P Y S+I+A + Y A ++F E+++ Y+ M+
Sbjct: 421 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIK 480
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-------KNLRQLEKYTTV- 295
GK GR+ DA+ L +M GC PNV+ YN+LM RA +R+++++ +
Sbjct: 481 HLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIP 540
Query: 296 -ISAYNM 301
I++YN+
Sbjct: 541 DINSYNI 547
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 119/276 (43%), Gaps = 2/276 (0%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M + + Y I++A ++ +++ + E K S Y IL D
Sbjct: 354 FEEMGTLQCIPSVVTYNTIIKALFE--SKSRISEISSWFERMKGSGISPSPFTYSILIDG 411
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ R + + +M EKG P+ Y SLI + +A ELF+E +E
Sbjct: 412 FCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSS 471
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V+ ++ + G ++ + + + M + +++G ++ A+
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ GCIP +Y I+N + G +A ++ M+Q V+Y++++ G
Sbjct: 532 RMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAG 591
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+A +L+ +M G E ++ Y+S+++ G+ +
Sbjct: 592 LFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKVDH 627
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM-LR 128
LG + + + F +K + Y S+I + + EL+ E +G
Sbjct: 165 LGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFP 224
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ + + G + + ++ MK+ + + I +++ F K A+ ++
Sbjct: 225 DTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLF 284
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ Q C P TY +I + G + +A F EM+++G V ++M+ GK
Sbjct: 285 EEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKA 344
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ DA++L +M C P+V YN+++
Sbjct: 345 GRLDDAVKLFEEMGTLQCIPSVVTYNTII 373
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 2/270 (0%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+++ +M+ G D+ ++ K G + LF E + L PS I+
Sbjct: 317 NFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGT--LQCIPSVVTYNTIIK 374
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
R EI +F MK GI P Y+ LI F + A L +E +EKG
Sbjct: 375 ALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFP 434
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ L+ + + E+ + +K + S + V++ K AV +
Sbjct: 435 PCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNL 494
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++++ GC P Y ++++ R G+ +A MQ+ G + +Y+ ++ K
Sbjct: 495 FDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAK 554
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
TG AM +++ MK +P+ YN+++
Sbjct: 555 TGGPHRAMEMLSNMKQSAIKPDAVSYNTVL 584
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 186 KVYEQLISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++Y ++ ++G C P VTY+++I+A+C++G A ++ EM+ G Y+ ++A+
Sbjct: 211 ELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIAL 270
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
+ K + A+ L +M+ + C P+V+ Y L+ G+A
Sbjct: 271 FFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAG-------------------R 311
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
FD F++E R G D + M+ K ++++
Sbjct: 312 FDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDD 349
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 128/269 (47%), Gaps = 6/269 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILCD 68
E+MK +G D G + +E++ K ++V + +E E R + P T Y +L +
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYR---IKPD-TRFYNVLLN 176
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L + + + M + I D S + LI + +V+ A + +E G+
Sbjct: 177 VLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSP 236
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D F ++ YIE G ++ L + E M +D V++NGF K+ A+
Sbjct: 237 DETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFI 296
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ +S+G P Q TY +++N C+IG A +V M G D + Y+S+++ K
Sbjct: 297 QEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKL 356
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G I +A++++ +M + C PN YN+++
Sbjct: 357 GEIEEAVKILDQMVSRDCSPNAVTYNAII 385
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 3/261 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+ S GI+ D + +++ + + LF E + + Y +L DSL
Sbjct: 404 LTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCR---PDEFTYNMLIDSLCS 460
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
S + E L ++M+ G + +Y +LI F ++ AEE+F E E +G+ RD
Sbjct: 461 SRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVT 520
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + VE ++++ M L ++ F K A + + +
Sbjct: 521 YNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMT 580
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S GC P VTYA++I+ C+ G A ++ +Q KG AY+ ++ K R
Sbjct: 581 SSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTH 640
Query: 253 DAMRLVAKMKPKGCEPNVWIY 273
+AMRL +M K P+ Y
Sbjct: 641 EAMRLFREMLDKSEPPDAITY 661
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 129/281 (45%), Gaps = 3/281 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M S G+ D + IM+ + + G+ + AL ++ + + P + +L +
Sbjct: 227 EEMPSYGLSPDETTFTTIMQGYIEGGNLD--GALRIKEQMVEYG-CPCTDVTVNVLINGF 283
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR + L F ++ +G D Y +L+ I K A E+ G+ D+
Sbjct: 284 CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDI 343
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + G +E+ +++++ M + + + + I++ K A ++
Sbjct: 344 YTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARL 403
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L S+G +P T+ S+I C + A +F EM+ KG Y+ ++ + +
Sbjct: 404 LTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRK 463
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ +A+ L+ +M+ GC NV IYN+L+D + K + + E+
Sbjct: 464 LEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEE 504
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 98/198 (49%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+ F +MK KG D Y LI S S +++ A L KE E G R++ ++ L+
Sbjct: 433 MDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDG 492
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ + +E+ E+ + M+ ++ +++G K + A ++ +Q+I +G P
Sbjct: 493 FCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPD 552
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+ TY S++ +C+ G KA + M G + +V Y+++++ K GR++ A RL+
Sbjct: 553 KFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLR 612
Query: 260 KMKPKGCEPNVWIYNSLM 277
++ KG YN ++
Sbjct: 613 SIQMKGMVLTPHAYNPVI 630
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 140/336 (41%), Gaps = 27/336 (8%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDS----EKVAALFLECESRKLDLTPSSTHM 62
L + ++ S G D Y ++ KIG + E V A+ L L P +
Sbjct: 293 LSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLG------GLDPD-IYT 345
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L K G E +K M + + Y ++I S V A E+ +
Sbjct: 346 YNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLT 405
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+L D+ F L+ + +++ E MK + ++++ R
Sbjct: 406 SKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLE 465
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + +++ GC V Y ++I+ +C+ +AE++F EM+ +G + V Y++++
Sbjct: 466 EALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLI 525
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-------------- 288
K+ R+ DA +L+ +M +G P+ + YNSL+ + ++++
Sbjct: 526 DGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCN 585
Query: 289 --LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVI 322
+ Y T+IS A + + +M G V+
Sbjct: 586 PDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVL 621
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 118/257 (45%), Gaps = 11/257 (4%)
Query: 27 QIMEAFYKIGDSEKVAAL-FLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRD 85
Q++E + +++VAAL S++ + PSS+ +Y+ + LGK+G + + +
Sbjct: 66 QLIETLRR--QTDEVAALRVFNWASKQPNFVPSSS-VYEEILRKLGKAGSFEYMRRVLEE 122
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
MK G D ++ + S+ + K E++ ++ F ++L + +
Sbjct: 123 MKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDA- 181
Query: 146 VEKTLEVVESMKNAELN--ISDCISC--VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
L++VES ++ + I +S +++ K A+ + E++ S G P +
Sbjct: 182 --NKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDET 239
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
T+ +I+ Y G A ++ +M + G V + ++ + K GRI A+ + +
Sbjct: 240 TFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA 299
Query: 262 KPKGCEPNVWIYNSLMD 278
+G P+ + YN+L++
Sbjct: 300 VSEGFRPDQFTYNTLVN 316
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 24/185 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M S+G D Y ++ K G + + L + + + LTP H Y + +L
Sbjct: 577 QTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTP---HAYNPVIQAL 633
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPS------VYASLICSFASIAEVKVAEELFKEAEEK 124
K R E ++ FR+M +K E P VY L I E A + E E+
Sbjct: 634 FKRNRTHEAMRLFREMLDKS--EPPDAITYKIVYRGLCNGGGPIGE---AVDFTVEMIER 688
Query: 125 GMLRDLEVFLKLV----LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G + + F+ L + +++ +V+ ++E K +E IS + GF K R
Sbjct: 689 GNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREIS------TIRGFLKIRK 742
Query: 181 YWAAV 185
+ A+
Sbjct: 743 FQDAL 747
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 130/282 (46%), Gaps = 4/282 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KMK + + ++ F K+G ++ V F + + + Y I+ D
Sbjct: 86 FSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAG---SKPTVFTYNIMIDC 142
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K G F +MK +G++ D Y S+I + + + F+E + D
Sbjct: 143 MWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPD 202
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + G + K LE MK + L + +V+ F K A+K Y
Sbjct: 203 VITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYV 262
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G +P + TY S+++A C+IG S A ++ EM + G + VV Y++++
Sbjct: 263 DMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAE 322
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLE 290
R+++A +L KM G PN+ YN+L+ +AKN+ R LE
Sbjct: 323 RMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALE 364
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 16/292 (5%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L K G+ + +FF+DM G Y +I +++ A LF+E + +G
Sbjct: 104 LLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRG 163
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
++ D + ++ Y + G ++ T+ E MK+ ++N F K +
Sbjct: 164 LIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGL 223
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ Y ++ G P V+Y+++++A+C+ + +A K +++M++ G Y+S+V
Sbjct: 224 EFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDAN 283
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-------------- 291
K G + DA RL +M G E NV Y +L+D A+ +++ EK
Sbjct: 284 CKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNL 343
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
Y +I + A+ D ++ NE + G D + G + L +IE
Sbjct: 344 ASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIE 395
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 138/298 (46%), Gaps = 13/298 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MK G++ D+ Y +++ + K+G + F E +S + P Y L +
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS--MSCEPDVI-TYNSLINC 212
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KSG+ + L+F+R+MK+ G+ + Y++L+ +F ++ A + + + G + +
Sbjct: 213 FCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPN 272
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ LV + G + + M + + +++G A K++
Sbjct: 273 EFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFG 332
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++++ G IP +Y ++I+ + + +A ++ E++ +G ++ Y + +
Sbjct: 333 KMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLE 392
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----------LRQLEKYTTVIS 297
+I A ++ +M+ G + N IY +LMD + ++ N +++L+ TV++
Sbjct: 393 KIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVT 450
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 20/264 (7%)
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
S+ ++ S A + E V +EL+ + + VF L + I+ GM+E+ +
Sbjct: 31 SILREIVLSKAELEECDVFDELW--STRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSK 88
Query: 156 MKNAELNISDCISCV-IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MK + SC +++ F+K + ++ +I G P TY +I+ + G
Sbjct: 89 MKRFRV-FPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEG 147
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
A +F EM+ +G V Y+SM+ YGK GR+ D + +MK CEP+V YN
Sbjct: 148 DIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYN 207
Query: 275 SLMDMHGRAKNL-------RQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMN 318
SL++ ++ L R++++ Y+T++ A+ +KFY + R
Sbjct: 208 SLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRV 267
Query: 319 GGVIDRAMAGIMVGVFSKLSQIEE 342
G V + +V K+ + +
Sbjct: 268 GHVPNEFTYTSLVDANCKIGNLSD 291
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 100/204 (49%), Gaps = 4/204 (1%)
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
RA E+L ++K +GI D +Y + I + +++ A+ + E +E G+ + ++
Sbjct: 361 RALELLN---ELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYT 417
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ Y + G + L ++E M+ + ++ CV+++G K + A+ + ++ +
Sbjct: 418 TLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSND 477
Query: 195 -GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
G P Y ++I+ C+ A +F +M Q+G AY+S++ K G + +
Sbjct: 478 FGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLE 537
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLM 277
A+ L KM G + ++ Y SL+
Sbjct: 538 ALALRDKMAEIGMKLDLLAYTSLV 561
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 146/365 (40%), Gaps = 41/365 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++++E+MKS D Y ++ F K G K + E + L S Y L
Sbjct: 188 VYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS---YSTL 244
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K + +KF+ DM+ G + + Y SL+ + I + A L E E G+
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC----------VIVNGFS 176
++ + L+ +G+ + E MK AE ++ +++GF
Sbjct: 305 EWNVVTYTALI-----DGLCD-----AERMKEAEKLFGKMVTAGVIPNLASYNALIHGFV 354
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K + A+++ +L +G P + Y + I C + A+ V EMQ+ G +
Sbjct: 355 KAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTL 414
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY---------NSL----MDMHGRA 283
Y++++ Y K+G + + L+ +M+ E V + N L +D GR
Sbjct: 415 IYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRM 474
Query: 284 KNLRQLEK----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR-AMAGIMVGVFSKLS 338
N L+ YT +I + + + G V DR A +M G + +
Sbjct: 475 SNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGN 534
Query: 339 QIEEL 343
+E L
Sbjct: 535 MLEAL 539
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 98/209 (46%), Gaps = 4/209 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ GI ++ Y +M+A++K G+ + L E + ++T + + +L D L
Sbjct: 403 EMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVT---FCVLIDGLC 459
Query: 72 KSGRAFEILKFFRDMKEK-GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+ + + +F M G+ + +VY ++I +VK A LF++ ++G++ D
Sbjct: 460 KNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDR 519
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +++G + + L + + M + + +V GFS+ A E+
Sbjct: 520 TAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEE 579
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKA 219
+I + +P +V ++ + +G +A
Sbjct: 580 MIGEEILPDEVLCIGVLKKHYELGCIDEA 608
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 145/333 (43%), Gaps = 23/333 (6%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S + +MK G+ + Y +M +K+ + LF E + Y
Sbjct: 244 SAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLF---EEMRHQYCRPDVFTYT 300
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L LGK+GR E FF +M+ +G D + ++I + A +LF+E E
Sbjct: 301 ELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETL 360
Query: 125 GMLRDLEVFLKLV-LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + + ++ ++ + V + E MK + ++ S ++++GF K
Sbjct: 361 RCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEK 420
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ + E++ +G P Y S+I+A + Y A ++F E+++ Y+ M+
Sbjct: 421 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIK 480
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-------KNLRQLEKYTTV- 295
GK GR+ DA+ L +M GC PNV+ YN+LM RA +R+++ + +
Sbjct: 481 HLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIP 540
Query: 296 -ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
I++YN+ N GG DRAM
Sbjct: 541 DINSYNI---------ILNALAKTGGP-DRAMG 563
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 120/273 (43%), Gaps = 2/273 (0%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M++ + Y I++A ++ +V+ + E K S Y IL D
Sbjct: 354 FEEMETLRCIPSVVTYNTIIKALFE--SKSRVSEISSWFERMKGSGISPSPFTYSILIDG 411
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ R + + +M EKG P+ Y SLI + +A ELF+E +E
Sbjct: 412 FCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSS 471
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V+ ++ + G ++ +++ + M + +++G ++ A+
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ GCIP +Y I+NA + G +A + M+Q V+Y++++ G
Sbjct: 532 RMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAG 591
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+A +L+ +M G + ++ Y+S+++ G+
Sbjct: 592 MFEEAAKLMKEMNAIGFDYDLITYSSILEAIGK 624
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 111/270 (41%), Gaps = 2/270 (0%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+++ +M+ G D+ ++ K G + LF E E+ L PS I+
Sbjct: 317 NFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMET--LRCIPSVVTYNTIIK 374
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
R EI +F MK GI P Y+ LI F + A L +E +EKG
Sbjct: 375 ALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFP 434
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ L+ + + E+ + +K + S + V++ K AV +
Sbjct: 435 PCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDL 494
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++++ GC P Y ++++ R G+ +A MQ G + +Y+ ++ K
Sbjct: 495 FDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAK 554
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
TG AM ++ MK +P+ YN+++
Sbjct: 555 TGGPDRAMGMLCNMKQSAIKPDAVSYNTVL 584
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
Query: 186 KVYEQLISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++Y ++ ++G C P VTY+++I+A+C++G A + EM+ G Y+ ++A+
Sbjct: 211 ELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMAL 270
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
K + A+ L +M+ + C P+V+ Y L+ G+A L + AYN
Sbjct: 271 LFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDE---------AYN---- 317
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
F++E R G D + M+ K ++++
Sbjct: 318 ------FFHEMRREGCRPDTVLMNNMINFLGKAGRLDD 349
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 130/280 (46%), Gaps = 3/280 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
S + M G + Y ++ ++G ++ +F + R+ D P+ Y
Sbjct: 21 NSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKK--MREDDCYPT-VRTY 77
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ +L +SGR E + F +M+E+G + Y +I + +++ + E E
Sbjct: 78 TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVE 137
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG++ + + L+ Y +EGMVE E+++ M + N ++ ++ GF +++
Sbjct: 138 KGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHR 197
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ + +++ P VTY S+I+ C+IG A ++ M + G YS +
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
K GRI +A L +K KG + N IY +L+D + +A
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKA 297
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D+L K GR E F +KEKGI + +Y +LI + ++ A L
Sbjct: 252 YSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML 311
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ L + + L+ +E V++ L ++ESM L + +++ K +
Sbjct: 312 TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFD 371
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ +Q++S G P Y + I+A+C G +AE + M ++G + Y+ ++
Sbjct: 372 YAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVI 431
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
YG G + A ++ +M GC+P+ Y+ L+
Sbjct: 432 DAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI 466
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 104/249 (41%), Gaps = 16/249 (6%)
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
+V A +F +KG R+ + L+ E G V++ + + + M+ + +
Sbjct: 19 DVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYT 78
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
VIV+ + A+ ++ ++ +GC P TY +INA C+ + ++ EM +K
Sbjct: 79 VIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK 138
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ- 288
G V Y++++ Y K G + A ++ M C PN YN L+ R KN+ +
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRA 198
Query: 289 -------LE-KYTTVISAYNMARE-------FDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
LE + T + YN D + N NG V D+ + +
Sbjct: 199 MALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDT 258
Query: 334 FSKLSQIEE 342
K +IEE
Sbjct: 259 LCKKGRIEE 267
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 4/233 (1%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
ESR LTPS Y L K G + M E G++ D Y+ I +
Sbjct: 207 ESR---LTPSVV-TYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKK 262
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ A LF +EKG+ + ++ L+ Y + G ++ +++ M + +
Sbjct: 263 GRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTY 322
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++G K R A+ + E +I +G TY +I A + G + A ++ +M
Sbjct: 323 NALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVS 382
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
G+ V Y++ + + G I++A +++ M +G P+ Y ++D +G
Sbjct: 383 SGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYG 435
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 18/223 (8%)
Query: 95 PSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
PSV Y SLI I + A L E G++ D + + ++G +E+ +
Sbjct: 212 PSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVL 271
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
S+K + ++ I +++G+ K A + ++++++ C+P TY ++I+ C+
Sbjct: 272 FNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCK 331
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
+A + M QKG V Y+ ++ K G A R++ +M G +P+V+I
Sbjct: 332 ERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYI 391
Query: 273 YNSLMDMHGRAKNLRQLEK----------------YTTVISAY 299
Y + + N+++ E YT VI AY
Sbjct: 392 YTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAY 434
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 116/287 (40%), Gaps = 32/287 (11%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M + + +S Y +++ K KV L ES + Y IL ++
Sbjct: 308 DRMLTEDCLPNSSTYNALIDGLCK---ERKVQEALLLMESMIQKGLKCTVPTYTILIVAM 364
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G + M G D +Y + I +F + +K AE++ E+G++ D
Sbjct: 365 LKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDA 424
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD-CISCVI------------------ 171
+ ++ Y G++ +V++ M + + S SC+I
Sbjct: 425 LTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALC 484
Query: 172 ----------VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
V K + A++++E+++ GC P TYA +I C++G A+K
Sbjct: 485 DSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQK 544
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+F M ++G Y+S++ + G DA+RLV M G P
Sbjct: 545 LFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLP 591
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 111/294 (37%), Gaps = 32/294 (10%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G+V D Y ++ K G E+ LF S K ++ +Y L D K
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLF---NSLKEKGIKANEVIYTALIDGYCK 296
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G+ + M + L + S Y +LI +V+ A L + +KG+ +
Sbjct: 297 AGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPT 356
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L++ ++EG + +++ M ++ I ++ F R A + +
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF 416
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM----------- 241
+G +P +TY +I+AY +GL + A V M G D YS +
Sbjct: 417 ERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTK 476
Query: 242 ------------------VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
VA K + A+ L KM GC PN+ Y L+
Sbjct: 477 KYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLI 530
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 114/300 (38%), Gaps = 36/300 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILC 67
+ +K GI + Y +++ + K G + +L R L D P+S+ Y L
Sbjct: 272 FNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLL----DRMLTEDCLPNSS-TYNALI 326
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D L K + E L M +KG+ Y LI + + A + + G
Sbjct: 327 DGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQ 386
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ ++ + + G +++ +++ M + ++++ + A V
Sbjct: 387 PDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDV 446
Query: 188 YEQLISQGCIPGQVTYASIINA---------YCRIGL--------------------YSK 218
+++ GC P TY+ +I Y + L +
Sbjct: 447 LKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFET 506
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A ++F +M + G + Y+ ++ K GR+ A +L M +G P+ IYNSL++
Sbjct: 507 ALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLN 566
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 87/189 (46%), Gaps = 10/189 (5%)
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
P+V+ + + + + + A ELF++ E G ++ + KL++ + G + ++ +
Sbjct: 488 PNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFD 547
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M ++ S+ I ++N + Y AV++ ++ G +P S+ +C G
Sbjct: 548 HMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLP---LLESLNVLFC--G 602
Query: 215 LYS-----KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
LY KA+ VF + Q G++ VA+ ++ K G L+ M+ +GC+ +
Sbjct: 603 LYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIH 662
Query: 270 VWIYNSLMD 278
Y L++
Sbjct: 663 PQTYRMLIE 671
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 122/234 (52%), Gaps = 2/234 (0%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S Y + LGKSGR + FRDM+++GIL + + +I + A++L
Sbjct: 160 SGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDL 219
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFS 176
F+ + +L + L+ + EG + E+ +++ I D + ++ +S
Sbjct: 220 FRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGF-IPDVYTYNALLEAYS 278
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ A +V++ ++ G P QV+Y +I+A+ R GL + A+ V+ M++ GF +
Sbjct: 279 RGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMK 338
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
++ +++ Y K G++ +A RLV +++ G +P+ +++NSL+ +G + + ++E
Sbjct: 339 SHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEME 392
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 107/232 (46%), Gaps = 13/232 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ +L D+ GKS + E K F MK+ L + + L+ +++ +++ AE+LF E +
Sbjct: 86 FNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMK 145
Query: 123 EKG---------MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
E + + + + + + G + + + M+ + + +++N
Sbjct: 146 ESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMIN 205
Query: 174 GFSKRRAYWA--AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ K AY++ A ++ + C P TY +++NA+ R G +AE++F E+Q GF
Sbjct: 206 IYGK--AYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGF 263
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
V Y++++ Y + A + M G P+ YN L+D GRA
Sbjct: 264 IPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRA 315
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV----- 201
EKT + MK+ + ++ V++ +S+ A K++ ++ PG V
Sbjct: 103 EKTFHL---MKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIF 159
Query: 202 ----TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
TY + + + G S+AE F +MQ++G V ++ M+ +YGK A L
Sbjct: 160 SGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDL 219
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
M+ C PN++ Y +LM+ H R N
Sbjct: 220 FRSMRKALCPPNLYTYTALMNAHAREGN 247
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 128/259 (49%), Gaps = 3/259 (1%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+++A ++ GD+E AL S+ L Y + L +SG + + F++M
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVSKGLK---PGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 192
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+ G+ D + LI F + E++ A +++KE +G+ DL F L+ ++ G ++
Sbjct: 193 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 252
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ + M+ L I +++ GF + A++V ++++ GC+P VTY +++
Sbjct: 253 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL 312
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N C+ AE + EM+++G + +++++ Y G++ A++L M +
Sbjct: 313 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 372
Query: 268 PNVWIYNSLMDMHGRAKNL 286
P++ YN+L+D R +L
Sbjct: 373 PDIVTYNTLIDGMCRQGDL 391
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 132/282 (46%), Gaps = 12/282 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKI 65
Y +M+ G+V D Y ++ F + G D+ +V + C +T Y
Sbjct: 257 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT------YNT 310
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + L K R + +M+E+G+ D + +LI + ++ A +LF +
Sbjct: 311 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 370
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D+ + L+ +G ++K ++ + M + E+ + ++++ ++ A
Sbjct: 371 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 430
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+++I++G +P +TY SII YCR G SK +K +M ++ Y++++ Y
Sbjct: 431 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 490
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAK 284
K ++ DA +L+ M+ + +P+V YN L++ +HG +
Sbjct: 491 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 532
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 131/285 (45%), Gaps = 7/285 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILC 67
+++M G+ D + ++ F ++G+ E+ ++ E R K DL + L
Sbjct: 188 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVS-----FSCLI 242
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ G+ + + R+M+ G++ D +Y +I F + A + E G L
Sbjct: 243 GLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL 302
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ + L+ +E + ++ M+ + C +++G+ A+++
Sbjct: 303 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 362
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ +++Q P VTY ++I+ CR G KA ++ +M + V YS ++ + +
Sbjct: 363 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 422
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
G++ DA + +M KG PN+ YNS++ + R+ N+ + +K+
Sbjct: 423 KGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKF 467
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 118/257 (45%), Gaps = 12/257 (4%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
YC+ +E +KV A+ E E R + TH ++ D+ ++G A +
Sbjct: 105 YCKALEF-------DKVDAVISEMEKRCV-FPDVVTH--NVMVDARFRAGDAEAAMALVD 154
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M KG+ Y S++ A E+FKE ++ G+ D+ F L+ + G
Sbjct: 155 SMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVG 214
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+E+ L++ + M++ + ++ F++R A+ ++ G +P V Y
Sbjct: 215 EIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYT 274
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+I +CR GL S A +V EM G VV Y++++ K R+ DA L+ +M+ +
Sbjct: 275 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 334
Query: 265 GCEPNVWIYNSLMDMHG 281
G P++ + +L +HG
Sbjct: 335 GVPPDLCTFTTL--IHG 349
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 107/227 (47%), Gaps = 3/227 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ M + + D Y +++ + GD +K L+ + SR ++ P+ Y IL
Sbjct: 360 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR--EIFPNHV-TYSIL 416
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DS + G+ + F +M KGIL + Y S+I + V ++ ++ +
Sbjct: 417 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 476
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
DL + L+ YI+E + +++ M+ ++ +++NGFS A
Sbjct: 477 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 536
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
++E++ ++G P + TY S+IN + G +A ++ EM Q+G +K
Sbjct: 537 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEK 583
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 3/257 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M+ G+ D + ++ + G +K LF +++L Y L D +
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR---PDIVTYNTLIDGM 385
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G + + DM + I + Y+ LI S +V+ A E KG+L ++
Sbjct: 386 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 445
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y G V K + ++ M +++ +++G+ K A K+
Sbjct: 446 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 505
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + P VTY +IN + G +A +F +M KG + Y SM+ + G
Sbjct: 506 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 565
Query: 251 IRDAMRLVAKMKPKGCE 267
++A +L +M +G E
Sbjct: 566 SKEAFQLHDEMLQRGKE 582
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 87/183 (47%)
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
++ ++ E + + E E++ + D+ +V G E + +V+SM +
Sbjct: 101 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 160
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
L ++ G + + A +V++++ G P ++ +I +CR+G +A
Sbjct: 161 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 220
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
K++ EM+ +G +V++S ++ ++ + G++ AM + +M+ G P+ IY ++
Sbjct: 221 KIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGF 280
Query: 281 GRA 283
RA
Sbjct: 281 CRA 283
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 24/185 (12%)
Query: 179 RAYWA--AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
RA W A Y + S T +++ YC+ + K + V EM+++ VV
Sbjct: 72 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL-------------------M 277
++ MV + G AM LV M KG +P + YNS+ M
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 191
Query: 278 DMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
D G A ++R +T +I + E + +K Y E R G D ++G+F++
Sbjct: 192 DDFGVAPDVRS---FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 248
Query: 338 SQIEE 342
+++
Sbjct: 249 GKMDH 253
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 7/235 (2%)
Query: 59 STHMYKILCDSLGKSGRAFEI-LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+T Y + D+ GK G L +FR M + D + SL+ + + ++ A L
Sbjct: 267 TTVTYNAVIDACGKGGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARAL 326
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F E G+ RD+ + + + G +E ++V+ M+ + + +++G+SK
Sbjct: 327 FDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSK 386
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
Y A+K+YE++ S G +V Y +++ Y + G Y + V EM+ G +K V
Sbjct: 387 LEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVT 446
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNL 286
Y+S++ YGK GR+ LV M+ +G P+V Y++L+D MHG A N+
Sbjct: 447 YNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNV 501
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 134/282 (47%), Gaps = 3/282 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y+ +M + D + ++ A + G E ALF E + + Y
Sbjct: 289 LGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIG---RDIYTYNTF 345
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D++ K G ++ DM+ K + + Y++LI ++ + + A +L+++ + G+
Sbjct: 346 IDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGI 405
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + ++ +Y++ G + V + M+++ + ++NG+ K+
Sbjct: 406 QLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSF 465
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + + +G P +TY+++I+ Y + G++ A V+++ ++ G VV +SS +
Sbjct: 466 LVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLA 525
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
K G + A+ L+ M G +PNV YN+++D G++K L +
Sbjct: 526 KNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSE 567
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 117/284 (41%), Gaps = 20/284 (7%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H+ + L D + RA E+ + G ++ + + I + ++ +A F
Sbjct: 164 HILRELGDRDKSAIRALEVFHAALPLVGNGSVDKGKLLTAAIGALGKMSRPDLARRAFDA 223
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G + L+ Y G+V + + V+ESMK A L + +++ K
Sbjct: 224 GIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGGV 283
Query: 181 YWA-AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+ + Q++ P + T+ S+++A R G A +F EM G + + Y+
Sbjct: 284 DLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYN 343
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+ + K G I AM+++ M+ K +PNV Y++L+D Y
Sbjct: 344 TFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLID-------------------GY 384
Query: 300 NMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ ++D +K Y + + G +DR ++ ++ K + E+
Sbjct: 385 SKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEI 428
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 120/290 (41%), Gaps = 49/290 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L YEKMKS GI LD CY ++ + K G ++A + E E ++ T Y L
Sbjct: 394 LKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIE---KDTVTYNSL 450
Query: 67 CDSLGKSGRAFEILKFF-RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+ GK GR +I+ F +DM+ +G+ Y++LI ++ A ++ + +E G
Sbjct: 451 INGYGKQGR-LDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESG 509
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D+ +F + + G+VE L ++ M
Sbjct: 510 LKPDVVLFSSFIDTLAKNGLVEWALSLLNDMT---------------------------- 541
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
G P VTY +II+A+ + + S+ + EM G + ++
Sbjct: 542 -------EMGIKPNVVTYNTIIDAFGKSKVLSEEDPEAGEMGIVGVYNGQIIRAANPVTR 594
Query: 246 GKTG---RIRDA------MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
G++ R+R + + L KM +G PNV ++++++ R N
Sbjct: 595 GRSAIDVRMRRSQELYFILELFQKMVQQGVRPNVVTFSAILNACSRCNNF 644
>gi|111154024|dbj|BAF02664.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|111185880|dbj|BAF02672.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 531
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 134/282 (47%), Gaps = 4/282 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++ + AG+ D Y +++ F K+ KV +F + + P + +L +
Sbjct: 168 FKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQRNRC---PPDLKLCTVLIST 224
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G G + + +G+ D Y +L+ ++A + AE+ + + G++ D
Sbjct: 225 YGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIVDD 284
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ LV Y + G+ + +++E+MK + + S + ++N SK A A V +
Sbjct: 285 -RPYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQ 343
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + GC ++TY S++ AY R AE + EM++ G V+Y +++ Y + G
Sbjct: 344 LMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAG 403
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
R+ DA R++ M+ C+P V IYN ++ + AK Q E+
Sbjct: 404 RLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAER 445
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 135/325 (41%), Gaps = 60/325 (18%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA--EEKGMLRD 129
KSGR EI++ F +P + + S+ S A + + E+ L
Sbjct: 85 KSGRVTEIVQQFTPSPSSLPEGNPKPCQNPLRSWGSRAAFTIVQATSSSDYLEDDSQLNS 144
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY 188
++ + +L +++G + + + + + A L D +S ++ GF K ++Y V+
Sbjct: 145 VKDYNSALLNCVKDGRMRDAMTIFKRFEGAGLK-PDVVSYTALIQGFGKLKSYNKVTDVF 203
Query: 189 EQ---------------LIS--------------------QGCIPGQVTYASIINAYCRI 213
+ LIS QG P + Y ++++AY +
Sbjct: 204 SRMQRNRCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQE 263
Query: 214 GLYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
GL+ +AEK +M G D+ Y+++VA YGK G + +++ MK G E +
Sbjct: 264 GLWEEAEKTLSDMLDVGIVDDR---PYAALVAAYGKAGLTDNVNKILETMKASGVEASTT 320
Query: 272 IYNSLMDMHGRAK---------NLRQLE-------KYTTVISAYNMAREFDMCVKFYNEF 315
+YN+L+++H +A+ L Q + YT+V+ AY+ ++ M E
Sbjct: 321 LYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEM 380
Query: 316 RMNGGVIDRAMAGIMVGVFSKLSQI 340
+ G G+++ + + ++
Sbjct: 381 KRAGIQPGPVSYGVLISAYCRAGRL 405
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 112/253 (44%), Gaps = 4/253 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M GIV D Y ++ A+ K G ++ V + E+ K +ST +Y L + K
Sbjct: 276 MLDVGIV-DDRPYAALVAAYGKAGLTDNVNKIL---ETMKASGVEASTTLYNTLINIHSK 331
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ + + M+ G D Y S++ +++ + +AE + E + G+
Sbjct: 332 AEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVS 391
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ Y G + ++ +M+NA+ + I ++++G++ + A ++++ +
Sbjct: 392 YGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQ 451
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P VT+ ++I+ Y + +AE +I MQQ G V Y ++ Y
Sbjct: 452 DCGLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQQLGCKPNAVTYKILLKAYTDYNNSI 511
Query: 253 DAMRLVAKMKPKG 265
DA R+ M+ G
Sbjct: 512 DAERIRLDMRKAG 524
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 128/259 (49%), Gaps = 3/259 (1%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+++A ++ GD+E AL S+ L Y + L +SG + + F++M
Sbjct: 197 MVDARFRAGDAEAAMALVDSMVSKGLK---PGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 253
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+ G+ D + LI F + E++ A +++KE +G+ DL F L+ ++ G ++
Sbjct: 254 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 313
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ + M+ L I +++ GF + A++V ++++ GC+P VTY +++
Sbjct: 314 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL 373
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N C+ AE + EM+++G + +++++ Y G++ A++L M +
Sbjct: 374 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 433
Query: 268 PNVWIYNSLMDMHGRAKNL 286
P++ YN+L+D R +L
Sbjct: 434 PDIVTYNTLIDGMCRQGDL 452
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 132/282 (46%), Gaps = 12/282 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKI 65
Y +M+ G+V D Y ++ F + G D+ +V + C +T Y
Sbjct: 318 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT------YNT 371
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + L K R + +M+E+G+ D + +LI + ++ A +LF +
Sbjct: 372 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 431
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D+ + L+ +G ++K ++ + M + E+ + ++++ ++ A
Sbjct: 432 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 491
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+++I++G +P +TY SII YCR G SK +K +M ++ Y++++ Y
Sbjct: 492 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 551
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAK 284
K ++ DA +L+ M+ + +P+V YN L++ +HG +
Sbjct: 552 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 593
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 131/285 (45%), Gaps = 7/285 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILC 67
+++M G+ D + ++ F ++G+ E+ ++ E R K DL + L
Sbjct: 249 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVS-----FSCLI 303
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ G+ + + R+M+ G++ D +Y +I F + A + E G L
Sbjct: 304 GLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL 363
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ + L+ +E + ++ M+ + C +++G+ A+++
Sbjct: 364 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 423
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ +++Q P VTY ++I+ CR G KA ++ +M + V YS ++ + +
Sbjct: 424 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 483
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
G++ DA + +M KG PN+ YNS++ + R+ N+ + +K+
Sbjct: 484 KGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKF 528
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 118/257 (45%), Gaps = 12/257 (4%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
YC+ +E +KV A+ E E R + TH ++ D+ ++G A +
Sbjct: 166 YCKALEF-------DKVDAVISEMEKRCV-FPDVVTH--NVMVDARFRAGDAEAAMALVD 215
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M KG+ Y S++ A E+FKE ++ G+ D+ F L+ + G
Sbjct: 216 SMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVG 275
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+E+ L++ + M++ + ++ F++R A+ ++ G +P V Y
Sbjct: 276 EIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYT 335
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+I +CR GL S A +V EM G VV Y++++ K R+ DA L+ +M+ +
Sbjct: 336 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 395
Query: 265 GCEPNVWIYNSLMDMHG 281
G P++ + +L +HG
Sbjct: 396 GVPPDLCTFTTL--IHG 410
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 3/225 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ M + + D Y +++ + GD +K L+ + SR ++ P+ Y IL
Sbjct: 421 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR--EIFPNHV-TYSIL 477
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DS + G+ + F +M KGIL + Y S+I + V ++ ++ +
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
DL + L+ YI+E + +++ M+ ++ +++NGFS A
Sbjct: 538 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 597
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++E++ ++G P + TY S+IN + G +A ++ EM Q+GF
Sbjct: 598 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGF 642
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 108/259 (41%), Gaps = 3/259 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M+ G+ D + ++ + G +K LF +++L Y L D +
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR---PDIVTYNTLIDGM 446
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G + + DM + I + Y+ LI S +V+ A E KG+L ++
Sbjct: 447 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 506
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y G V K + ++ M +++ +++G+ K A K+
Sbjct: 507 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 566
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + P VTY +IN + G +A +F +M KG + Y SM+ + G
Sbjct: 567 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 626
Query: 251 IRDAMRLVAKMKPKGCEPN 269
++A +L +M +G P+
Sbjct: 627 SKEAFQLHDEMLQRGFAPD 645
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 87/183 (47%)
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
++ ++ E + + E E++ + D+ +V G E + +V+SM +
Sbjct: 162 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 221
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
L ++ G + + A +V++++ G P ++ +I +CR+G +A
Sbjct: 222 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 281
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
K++ EM+ +G +V++S ++ ++ + G++ AM + +M+ G P+ IY ++
Sbjct: 282 KIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGF 341
Query: 281 GRA 283
RA
Sbjct: 342 CRA 344
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 24/185 (12%)
Query: 179 RAYWA--AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
RA W A Y + S T +++ YC+ + K + V EM+++ VV
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL-------------------M 277
++ MV + G AM LV M KG +P + YNS+ M
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252
Query: 278 DMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
D G A ++R +T +I + E + +K Y E R G D ++G+F++
Sbjct: 253 DDFGVAPDVRS---FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 309
Query: 338 SQIEE 342
+++
Sbjct: 310 GKMDH 314
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKE-KGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D + K G L R M+E I+ + +Y+++I S A+ LF E
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+EKG+ DL + +++ + G ++++ M +++ ++N F K +
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ A ++Y++++ +G IP +TY+S+I+ +C+ AE +F M KG ++ ++++
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ Y RI D M L+ +M G + YN+L +HG
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL--IHG 439
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M GI+ ++ Y +++ F K + +F ++ +P+ + L D
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC--SPNLI-TFNTLIDG 404
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ R + ++ +M E G++ D + Y +LI F + ++ A +L +E G+ D
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDCISCV---------IVNGFSKR 178
+ L+ + G ++ LE+ + M+ + +L+ S + V +++G
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A ++YE++ +G +P +TY+S+I+ C+ +A ++F M K F VV +
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++++ Y K GR+ D + L +M +G N Y +L+
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 126/322 (39%), Gaps = 49/322 (15%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ + +M+ GI D Y ++ F G L E RK+ +P Y L
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI--SPDVV-TYNALI 332
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++ K G+ FE + + +M +GI+ + Y+S+I F + AE +F KG
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+L F L+ Y ++ +E++ M L +++GF AA+ +
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 188 YEQLISQGCIPGQVTYASIINAYC------------------------------------ 211
+++IS G P VT ++++ C
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 212 ----------RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
G + +AE+++ EM +G + YSSM+ K R+ +A ++ M
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 262 KPKGCEPNVWIYNSLMDMHGRA 283
K PNV + +L++ + +A
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKA 594
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 47/281 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYK 64
+ +M G+V D+ Y ++ FY +GD L E S L D+ T +
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT-LLD 473
Query: 65 ILCDSLGKSGRAFEILKFFRDMKE--------KGILEDPSVYASLICSFASIAEVKVAEE 116
LCD+ GK A E+ K + K+ G+ D Y LI + + AEE
Sbjct: 474 GLCDN-GKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L++E +G++ D + + ++G
Sbjct: 533 LYEEMPHRGIVPDTITYSSM-----------------------------------IDGLC 557
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K+ A ++++ + S+ P VT+ ++IN YC+ G ++F EM ++G +
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y +++ + K G I A+ + +M G P+ +++
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 143/333 (42%), Gaps = 22/333 (6%)
Query: 27 QIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRD 85
++ F++I E LF + SR L PS K++ + + R ++ ++
Sbjct: 49 KLQSGFHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLM-GVVVRMERPDLVISLYQK 104
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M+ K I D + LI F S +++ A F + + G+ D+ F L+ E
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDR 164
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
V + L + M + ++NG + AV + ++++ G P Q+TY +
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 206 IINAYCRIGLYSKAEKVFIEMQQ-KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
I++ C+ G A + +M++ VV YS+++ K GR DA L +M+ K
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 265 GCEPNVWIYNSLMD---MHGRAKNLRQLEK-------------YTTVISAYNMAREFDMC 308
G P+++ YNS++ GR + QL + Y +I+A+ +F
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ Y+E G + + M+ F K ++++
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 130/273 (47%), Gaps = 5/273 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY-KILCD 68
+ +M+ A V + + ++ + G EK LF++ + R P + + + +L D
Sbjct: 127 FNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLED 186
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ K R E L FRD+++ + Y +I + E AE L++
Sbjct: 187 A--KEYRRAEAL--FRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPP 242
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ F L+ + +G+ + + ++ + ++ +S+ + A++++
Sbjct: 243 NICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIF 302
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ + GC P V++ +INAY R GLY AEK+F MQ GF + + +++ Y +
Sbjct: 303 QTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARA 362
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
GR+ +A LV+ M+ G +P+ IYN+L++ +G
Sbjct: 363 GRVEEAEELVSAMERDGTKPDTLIYNALINAYG 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 128/279 (45%), Gaps = 9/279 (3%)
Query: 21 DSGCYCQIMEAFYK---IGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAF 77
D GCY +++A+ K I D+EK E L + + +L + +G
Sbjct: 103 DLGCYNLLIDAYGKSLNIEDAEKTFNRMQEA------LCVPNEETFGVLINGYRLAGSFE 156
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
+ + F M+++G P + + E + AE LF++ E+ +++ + +++
Sbjct: 157 KAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMI 216
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
++Y + G K + SM+ A + C ++N F+++ Y A + +++L
Sbjct: 217 VIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYK 276
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P Y +++ AY + G + A ++F MQ+ G V+++ ++ YG+ G DA ++
Sbjct: 277 PDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKI 336
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
M+ G PN+ L+ + RA + + E+ + +
Sbjct: 337 FKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAM 375
>gi|168056841|ref|XP_001780426.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695174|dbj|BAD67152.1| PpPPR_38 [Physcomitrella patens]
gi|162668102|gb|EDQ54716.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 134/282 (47%), Gaps = 4/282 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++ + AG+ D Y +++ F K+ KV +F + + P + +L +
Sbjct: 168 FKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQRNRC---PPDLKLCTVLIST 224
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G G + + +G+ D Y +L+ ++A + AE+ + + G++ D
Sbjct: 225 YGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIVDD 284
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ LV Y + G+ + +++E+MK + + S + ++N SK A A V +
Sbjct: 285 -RPYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQ 343
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + GC ++TY S++ AY R AE + EM++ G V+Y +++ Y + G
Sbjct: 344 LMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAG 403
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
R+ DA R++ M+ C+P V IYN ++ + AK Q E+
Sbjct: 404 RLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAER 445
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 135/325 (41%), Gaps = 60/325 (18%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA--EEKGMLRD 129
KSGR EI++ F +P + + S+ S A + + E+ L
Sbjct: 85 KSGRVTEIVQQFTPSPSSLPEGNPKPCQNPLRSWGSRAAFTIVQATSSSDYLEDDSQLNS 144
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY 188
++ + +L +++G + + + + + A L D +S ++ GF K ++Y V+
Sbjct: 145 VKDYNSALLNCVKDGRMRDAMTIFKRFEGAGLK-PDVVSYTALIQGFGKLKSYNKVTDVF 203
Query: 189 EQ---------------LIS--------------------QGCIPGQVTYASIINAYCRI 213
+ LIS QG P + Y ++++AY +
Sbjct: 204 SRMQRNRCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQE 263
Query: 214 GLYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
GL+ +AEK +M G D+ Y+++VA YGK G + +++ MK G E +
Sbjct: 264 GLWEEAEKTLSDMLDVGIVDDR---PYAALVAAYGKAGLTDNVNKILETMKASGVEASTT 320
Query: 272 IYNSLMDMHGRAK---------NLRQLE-------KYTTVISAYNMAREFDMCVKFYNEF 315
+YN+L+++H +A+ L Q + YT+V+ AY+ ++ M E
Sbjct: 321 LYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEM 380
Query: 316 RMNGGVIDRAMAGIMVGVFSKLSQI 340
+ G G+++ + + ++
Sbjct: 381 KRAGIQPGPVSYGVLISAYCRAGRL 405
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 101/236 (42%), Gaps = 21/236 (8%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M GIV D Y ++ A+ K G ++ V + E+ K +ST +Y L + K
Sbjct: 276 MLDVGIV-DDRPYAALVAAYGKAGLTDNVNKIL---ETMKASGVEASTTLYNTLINIHSK 331
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ + + M+ G D Y S++ +++ + +AE + E + G+
Sbjct: 332 AEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVS 391
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE--- 189
+ L+ Y G + ++ +M+NA+ + I ++++G++ + A ++++
Sbjct: 392 YGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQ 451
Query: 190 --------------QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ GC P VTY ++ AY AE++ ++M++ G
Sbjct: 452 DCGLRPDAAEDCYIRMQQLGCKPNAVTYKILLKAYTDYNNSIDAERIRLDMRKAGI 507
>gi|9755888|emb|CAC01941.1| RSP67.2 [Raphanus sativus]
Length = 700
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 151/335 (45%), Gaps = 22/335 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC-DSLGKSGRAFEILKFF 83
Y M+ F K D EK LF E R + ++T I C G RA E +F
Sbjct: 176 YNVTMKVFRKSKDLEKSEKLFDEMLQRGVK-PDNATFTTLISCARQCGLPNRAVE---WF 231
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
M G+ D A++I ++ V++A L+ A + D F L+ +Y
Sbjct: 232 EKMPSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYA 291
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G + L + E MK+ + + I +++ K + W A +++ LIS G P TY
Sbjct: 292 GNYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTY 351
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
A++I AY R A ++ +M+ KG + V+ Y+++++M G + +A + MK
Sbjct: 352 AALIRAYGRARYGEDALVIYRQMKGKGMELTVLLYNTLLSMCADIGYVDEAFEIFQDMKS 411
Query: 264 KG-CEPNVWIYNSLMDMH---GRAKN----LRQLEK---------YTTVISAYNMAREFD 306
G CEP+ W ++SL+ ++ GR LR++ + T++I Y A++ D
Sbjct: 412 SGTCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQVD 471
Query: 307 MCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
V+ + + G D G ++ V ++ + E
Sbjct: 472 DVVRTFEQVLELGIEPDDRFCGCLLNVMTQTPKEE 506
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 106/263 (40%), Gaps = 72/263 (27%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ YE+MKS G+ K +L +Y L
Sbjct: 298 LNIYEEMKSLGV---------------------------------KPNLV-----IYNRL 319
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DS+GK+ R ++ +D+ G + S YA+LI ++ + A ++++ + KGM
Sbjct: 320 LDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARYGEDALVIYRQMKGKGM 379
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ ++ L+ M + G V++ E+ + MK+
Sbjct: 380 ELTVLLYNTLLSMCADIGYVDEAFEIFQDMKS---------------------------- 411
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
S C P T++S+I Y G S+AE EM++ GF+ + +S++ YG
Sbjct: 412 ------SGTCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYG 465
Query: 247 KTGRIRDAMRLVAKMKPKGCEPN 269
K ++ D +R ++ G EP+
Sbjct: 466 KAKQVDDVVRTFEQVLELGIEPD 488
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKE-KGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D + K G L R M+E I+ + +Y+++I S A+ LF E
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+EKG+ DL + +++ + G ++++ M +++ ++N F K +
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ A ++Y++++ +G IP +TY+S+I+ +C+ AE +F M KG ++ ++++
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ Y RI D M L+ +M G + YN+L +HG
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL--IHG 439
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M GI+ ++ Y +++ F K + +F ++ +P+ + L D
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC--SPNLI-TFNTLIDG 404
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ R + ++ +M E G++ D + Y +LI F + ++ A +L +E G+ D
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDCISCV---------IVNGFSKR 178
+ L+ + G ++ LE+ + M+ + +L+ S + V +++G
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A ++YE++ +G +P +TY+S+I+ C+ +A ++F M K F VV +
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++++ Y K GR+ D + L +M +G N Y +L+
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 126/322 (39%), Gaps = 49/322 (15%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ + +M+ GI D Y ++ F G L E RK+ +P Y L
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI--SPDVV-TYNALI 332
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++ K G+ FE + + +M +GI+ + Y+S+I F + AE +F KG
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+L F L+ Y ++ +E++ M L +++GF AA+ +
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 188 YEQLISQGCIPGQVTYASIINAYC------------------------------------ 211
+++IS G P VT ++++ C
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 212 ----------RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
G + +AE+++ EM +G + YSSM+ K R+ +A ++ M
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 262 KPKGCEPNVWIYNSLMDMHGRA 283
K PNV + +L++ + +A
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKA 594
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 143/333 (42%), Gaps = 22/333 (6%)
Query: 27 QIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRD 85
++ F++I E LF + SR L PS K++ + + R ++ ++
Sbjct: 49 KLQSGFHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLM-GVVVRMERPDLVISLYQK 104
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M+ K I D + LI F S +++ A F + + G+ D+ F L+ E
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
V + L+ M + ++NG + AV + ++++ G P Q+TY +
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 206 IINAYCRIGLYSKAEKVFIEMQQ-KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
I++ C+ G A + +M++ VV YS+++ K GR DA L +M+ K
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 265 GCEPNVWIYNSLMD---MHGRAKNLRQLEK-------------YTTVISAYNMAREFDMC 308
G P+++ YNS++ GR + QL + Y +I+A+ +F
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ Y+E G + + M+ F K ++++
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 47/281 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYK 64
+ +M G+V D+ Y ++ FY +GD L E S L D+ T +
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT-LLD 473
Query: 65 ILCDSLGKSGRAFEILKFFRDMKE--------KGILEDPSVYASLICSFASIAEVKVAEE 116
LCD+ GK A E+ K + K+ G+ D Y LI + + AEE
Sbjct: 474 GLCDN-GKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L++E +G++ D + + ++G
Sbjct: 533 LYEEMPHRGIVPDTITYSSM-----------------------------------IDGLC 557
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K+ A ++++ + S+ P VT+ ++IN YC+ G ++F EM ++G +
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y +++ + K G I A+ + +M G P+ +++
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 142/336 (42%), Gaps = 58/336 (17%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +YE M+ G+V + Y ++ YK L+ + KL+ P+ +Y I+
Sbjct: 162 LEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVEKLE--PNFV-LYAII 218
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L K GR + + F+DM+ G L D +Y ++IC+ + + +E L+ + +++G+
Sbjct: 219 IHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMKKQGI 278
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ S +++N +SK + +A +
Sbjct: 279 VP-----------------------------------SKFTYTIMINVWSKAGRFASAAE 303
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ GCI +V Y SIIN Y + GLY +AEK+F EM G +Y+SM +
Sbjct: 304 TLAEMQRSGCIADEVVYCSIINMYGKAGLYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRA 363
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
+ GR +A++L M KG +N+L+ R ++ Q
Sbjct: 364 EAGRHAEALKLFDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQ------------------ 405
Query: 307 MCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
K YN+ + G + G M+ ++SK +E+
Sbjct: 406 -ATKVYNDM-VEAGSANVVTYGNMINLYSKFQMVED 439
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 142/294 (48%), Gaps = 42/294 (14%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
++ +H ++ M++AG + D Y I+ A K+G ++ AL+L+ +K + PS
Sbjct: 228 TEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDM--KKQGIVPSK-FT 284
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ + K+GR + +M+ G + D VY S+I + + AE++FKE +
Sbjct: 285 YTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYEEAEKIFKEMD 344
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+L + + + + E G ++AE
Sbjct: 345 TLGLLSHEKSYTSMAKVRAEAG------------RHAE---------------------- 370
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+K+++ + +G + ++T+ ++++ + RIG +A KV+ +M + G VV Y +M+
Sbjct: 371 -ALKLFDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAG-SANVVTYGNMI 428
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
+Y K + DA L+A+M+ G +P+ +IY S + ++ N ++K T V+
Sbjct: 429 NLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYC---NSDMIDKATMVV 479
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 152/346 (43%), Gaps = 29/346 (8%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+++ G ++D+ I + + G +K +LF + + P S ++Y +
Sbjct: 536 VEAGGCIVDTAAVLMI-NLYGRRGLFQKAKSLFNSLQKKD---HPPSLYVYNTMIKLCAV 591
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
E + F M+E G + D + L+ ++ K A L K A++ G+ D
Sbjct: 592 CKELEEAIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVA 651
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ + ++ G ++ LEV M+ A++ S ++++ FSK AV+ +E L
Sbjct: 652 YNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLN 711
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S ++ Y+ +I+ Y G +A +F EM+ KGF V Y++++ + + G
Sbjct: 712 SSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFA 771
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGR------AKNLRQL----------EKYTTVI 296
+A L++ M+ KGC P+ Y LM +G A++L L Y VI
Sbjct: 772 EARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVI 831
Query: 297 SAY-NMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
AY N+ + D C FY E + G G+ +G F L +I
Sbjct: 832 RAYGNVGKLSDACRIFY-ELKTVG-------IGLELGCFRTLVKIH 869
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 45 FLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICS 104
F E ++ +PS Y L G++G+ + +M + G+ D ++ +
Sbjct: 93 FFEWMKLQIPYSPSVI-AYTTLLGIYGQAGKLTLAEETLSEMLDAGVEPDEVAGGCMLEA 151
Query: 105 FASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS 164
+A E ++ ++G++ V+ +++ + L + E + +L +
Sbjct: 152 YARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVEKLEPN 211
Query: 165 DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI 224
+ +I++ +K AV ++ + + G +P ++ Y +II A ++G Y ++E +++
Sbjct: 212 FVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYL 271
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+M+++G Y+ M+ ++ K GR A +A+M+ GC + +Y S+++M+G+A
Sbjct: 272 DMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAG 331
Query: 285 NLRQLEK 291
+ EK
Sbjct: 332 LYEEAEK 338
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 139/366 (37%), Gaps = 96/366 (26%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ +G + D YC I+ + K G E+ +F E ++ L S Y +
Sbjct: 307 EMQRSGCIADEVVYCSIINMYGKAGLYEEAEKIFKEMDTLGL---LSHEKSYTSMAKVRA 363
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA----------------- 114
++GR E LK F M EKG+L + +L+ F I +V+ A
Sbjct: 364 EAGRHAEALKLFDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGSANVVT 423
Query: 115 -----------------EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
E L E E G+ D ++ V +Y M++K VV+ MK
Sbjct: 424 YGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMK 483
Query: 158 NAELN--------------ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ-----GCIP 198
+ L + I I+N +RA ++ E L+ + GCI
Sbjct: 484 DDGLESVCNEREMFPLGQALQSPIDTQILNQLLIKRAEAGELREAELLLDKLVEAGGCI- 542
Query: 199 GQVTYASI--INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM------------ 244
V A++ IN Y R GL+ KA+ +F +Q+K + Y++M+ +
Sbjct: 543 --VDTAAVLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIF 600
Query: 245 -----------------------YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
Y K GR +DA L+ + K G + YN+ + +
Sbjct: 601 VFDRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANL 660
Query: 282 RAKNLR 287
++ NL+
Sbjct: 661 KSGNLK 666
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 113/270 (41%), Gaps = 38/270 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++ K G+ +D+ Y ++A K G+ + AL + E ++ D+ PS+ Y IL
Sbjct: 638 KRAKKVGVAMDTVAYNTSLKANLKSGNLK--GALEVYGEMQEADIEPSA-KTYTILISLF 694
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G ++ F + + D Y+ +I + K A +LF+E E KG +
Sbjct: 695 SKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNE 754
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
++ L+ + G+ A L +SD RR
Sbjct: 755 VIYNNLLDAFARAGL----------FAEARLLLSDM-----------RR----------- 782
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+GC P VTY +++AY G + AE + MQ +G Y+ ++ YG G+
Sbjct: 783 ---KGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGK 839
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ DA R+ ++K G + + +L+ +H
Sbjct: 840 LSDACRIFYELKTVGIGLELGCFRTLVKIH 869
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 93/222 (41%), Gaps = 4/222 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E + S+ + D Y Q++ + G ++ A LF E E++ P+ +Y L D+
Sbjct: 707 FEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETK--GFKPNEV-IYNNLLDA 763
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++G E DM+ KG Y L+ ++ S + AE L +++G+ D
Sbjct: 764 FARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPD 823
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ +++ Y G + + +K + + +V + ++Y+
Sbjct: 824 CRHYNEVIRAYGNVGKLSDACRIFYELKTVGIGLELGCFRTLVKIHLDHGQFEQGWQIYK 883
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
L SQ Q Y + G ++A+++ +E++ KGF
Sbjct: 884 DL-SQSFTVDQNLYGIAVELCIGAGRRTEADQLKVELKGKGF 924
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 135/308 (43%), Gaps = 40/308 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH+++K+ + G L+ Y ++ KIGD+ L + + R LT + MY +
Sbjct: 149 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR---LTKPNVEMYSTI 205
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+L K E F +M KGI D Y++LI F ++K A L E K +
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTI 265
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS------------------ 168
++ + LV +EG V++ V+ M A + D I+
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK-PDVITYSTLMDGYFLVYEVKKAQ 324
Query: 169 ------------------CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
+++NGF K + A+ +++++ + +PG VTY+S+I+
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
C+ G + EM+ +G V+ YSS++ K G + A+ L KMK + PN+
Sbjct: 385 CKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNI 444
Query: 271 WIYNSLMD 278
+ + L+D
Sbjct: 445 FTFTILLD 452
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 126/303 (41%), Gaps = 17/303 (5%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP KIL DS K + ++ KGI D LI F + ++
Sbjct: 56 TPPIIQFNKIL-DSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ + ++G D L+ +G V+K L + + ++ ++NG
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 174
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A+K+ ++ + P Y++II+A C+ L S+A +F EM KG V
Sbjct: 175 CKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQLE-- 290
V YS+++ + G++++A+ L+ +M K PNV+ YN L+D G+ K + +
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 291 -----------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
Y+T++ Y + E +N + G D I++ F K
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354
Query: 340 IEE 342
++E
Sbjct: 355 VDE 357
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 91/195 (46%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F M G+ D Y LI F V A LFKE +K M+ + + L+ +
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G + ++++ M++ +++G K A+ ++ ++ Q P T
Sbjct: 387 SGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
+ +++ C+ G A++VF ++ KG+ V Y+ M+ + K G + +A+ +++KM+
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506
Query: 263 PKGCEPNVWIYNSLM 277
GC PN + + +++
Sbjct: 507 DNGCIPNAFTFETII 521
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 113/253 (44%), Gaps = 3/253 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M A + D Y +M+ ++ + + +K +F + +TP H Y IL + K
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF--NAMSLMGVTPD-VHTYTILINGFCK 351
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ E L F++M +K ++ Y+SLI + +L E ++G D+
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVIT 411
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + G +++ + + MK+ E+ + ++++G K A +V++ L+
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLL 471
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
++G TY +IN +C+ GL +A + +M+ G + +++ K
Sbjct: 472 TKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEND 531
Query: 253 DAMRLVAKMKPKG 265
A +L+ +M +G
Sbjct: 532 KAEKLLRQMIARG 544
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKE-KGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D + K G L R M+E I+ + +Y+++I S A+ LF E
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+EKG+ DL + +++ + G ++++ M +++ ++N F K +
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ A ++Y++++ +G IP +TY+S+I+ +C+ AE +F M KG ++ ++++
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ Y RI D M L+ +M G + YN+L +HG
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL--IHG 439
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M GI+ ++ Y +++ F K + +F ++ +P+ + L D
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC--SPNLI-TFNTLIDG 404
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ R + ++ +M E G++ D + Y +LI F + ++ A +L +E G+ D
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDCISCV---------IVNGFSKR 178
+ L+ + G ++ LE+ + M+ + +L+ S + V +++G
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A ++YE++ +G +P +TY+S+I+ C+ +A ++F M K F VV +
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++++ Y K GR+ D + L +M +G N Y +L+
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 126/322 (39%), Gaps = 49/322 (15%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ + +M+ GI D Y ++ F G L E RK+ +P Y L
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI--SPDVV-TYNALI 332
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++ K G+ FE + + +M +GI+ + Y+S+I F + AE +F KG
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+L F L+ Y ++ +E++ M L +++GF AA+ +
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 188 YEQLISQGCIPGQVTYASIINAYC------------------------------------ 211
+++IS G P VT ++++ C
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 212 ----------RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
G + +AE+++ EM +G + YSSM+ K R+ +A ++ M
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 262 KPKGCEPNVWIYNSLMDMHGRA 283
K PNV + +L++ + +A
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKA 594
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 47/281 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYK 64
+ +M G+V D+ Y ++ FY +GD L E S L D+ T +
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT-LLD 473
Query: 65 ILCDSLGKSGRAFEILKFFRDMKE--------KGILEDPSVYASLICSFASIAEVKVAEE 116
LCD+ GK A E+ K + K+ G+ D Y LI + + AEE
Sbjct: 474 GLCDN-GKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L++E +G++ D + + ++G
Sbjct: 533 LYEEMPHRGIVPDTITYSSM-----------------------------------IDGLC 557
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K+ A ++++ + S+ P VT+ ++IN YC+ G ++F EM ++G +
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y +++ + K G I A+ + +M G P+ +++
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 143/333 (42%), Gaps = 22/333 (6%)
Query: 27 QIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRD 85
++ F++I E LF + SR L PS K++ + + R ++ ++
Sbjct: 49 KLQSGFHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLM-GVVVRMERPDLVISLYQK 104
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M+ K I D + LI F S +++ A F + + G+ D+ F L+ E
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDR 164
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
V + L + M + ++NG + AV + ++++ G P Q+TY +
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 206 IINAYCRIGLYSKAEKVFIEMQQ-KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
I++ C+ G A + +M++ VV YS+++ K GR DA L +M+ K
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 265 GCEPNVWIYNSLMD---MHGRAKNLRQLEK-------------YTTVISAYNMAREFDMC 308
G P+++ YNS++ GR + QL + Y +I+A+ +F
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ Y+E G + + M+ F K ++++
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKE-KGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D + K G L R M+E I+ + +Y+++I S A+ LF E
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+EKG+ DL + +++ + G ++++ M +++ ++N F K +
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ A ++Y++++ +G IP +TY+S+I+ +C+ AE +F M KG ++ ++++
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ Y RI D M L+ +M G + YN+L +HG
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL--IHG 439
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M GI+ ++ Y +++ F K + +F ++ +P+ + L D
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC--SPNLI-TFNTLIDG 404
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ R + ++ +M E G++ D + Y +LI F + ++ A +L +E G+ D
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDCISCV---------IVNGFSKR 178
+ L+ + G ++ LE+ + M+ + +L+ S + V +++G
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A ++YE++ +G +P +TY+S+I+ C+ +A ++F M K F VV +
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++++ Y K GR+ D + L +M +G N Y +L+
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 126/322 (39%), Gaps = 49/322 (15%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ + +M+ GI D Y ++ F G L E RK+ +P Y L
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI--SPDVV-TYNALI 332
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++ K G+ FE + + +M +GI+ + Y+S+I F + AE +F KG
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+L F L+ Y ++ +E++ M L +++GF AA+ +
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 188 YEQLISQGCIPGQVTYASIINAYC------------------------------------ 211
+++IS G P VT ++++ C
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 212 ----------RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
G + +AE+++ EM +G + YSSM+ K R+ +A ++ M
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 262 KPKGCEPNVWIYNSLMDMHGRA 283
K PNV + +L++ + +A
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKA 594
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 47/281 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYK 64
+ +M G+V D+ Y ++ FY +GD L E S L D+ T +
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT-LLD 473
Query: 65 ILCDSLGKSGRAFEILKFFRDMKE--------KGILEDPSVYASLICSFASIAEVKVAEE 116
LCD+ GK A E+ K + K+ G+ D Y LI + + AEE
Sbjct: 474 GLCDN-GKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L++E +G++ D + + ++G
Sbjct: 533 LYEEMPHRGIVPDTITYSSM-----------------------------------IDGLC 557
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K+ A ++++ + S+ P VT+ ++IN YC+ G ++F EM ++G +
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y +++ + K G I A+ + +M G P+ +++
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 143/333 (42%), Gaps = 22/333 (6%)
Query: 27 QIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRD 85
++ F++I E LF + SR L PS K++ + + R ++ ++
Sbjct: 49 KLQSGFHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLM-GVVVRMERPDLVISLYQK 104
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M+ K I D + LI F S +++ A F + + G+ D+ F L+ E
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
V + L + M + ++NG + AV + ++++ G P Q+TY +
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 206 IINAYCRIGLYSKAEKVFIEMQQ-KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
I++ C+ G A + +M++ VV YS+++ K GR DA L +M+ K
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 265 GCEPNVWIYNSLMD---MHGRAKNLRQLEK-------------YTTVISAYNMAREFDMC 308
G P+++ YNS++ GR + QL + Y +I+A+ +F
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ Y+E G + + M+ F K ++++
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y K+ GI D Y ++ F + G +V L CE ++ P+ + + +L D+
Sbjct: 247 YLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLM--CEMVNKNINPN-VYTFNVLIDA 303
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G+ E F M ++G D + +LI V A +LF E+G+L D
Sbjct: 304 FCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPD 363
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L++ Y + +++ + + M+ + + + +++G K A +++
Sbjct: 364 VWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFS 423
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + G P +TY +I+A+C+I ++F M KG V+ Y+ ++ Y K+
Sbjct: 424 TINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSK 483
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
RIR+AM L++ M+ K P+ YNSL D
Sbjct: 484 RIREAMNLLSVMQSKNLAPDSITYNSLFD 512
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 122/283 (43%), Gaps = 3/283 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + +++ + + G++LD CY ++ KIG S L E E + + + +Y
Sbjct: 171 QKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQ---VVKPNIVIY 227
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ DS K + + + + GI D Y SLI F + ++L E
Sbjct: 228 NMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVN 287
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
K + ++ F L+ + +G + + + M +++G
Sbjct: 288 KNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLE 347
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K+++ + +G +P +Y +I YC+ +A +F EM+ K +V YSS++
Sbjct: 348 ARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLID 407
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
K+GRI A L + + G PNV YN L+D + +++
Sbjct: 408 GLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDI 450
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 125/288 (43%), Gaps = 19/288 (6%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ G AF +L + ++G + +++ EV+ A + +GML D
Sbjct: 132 LGEMGFAFSVLGI---VLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLD 188
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G ++++ M+ + + I +I++ F K A +Y
Sbjct: 189 EVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYL 248
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ G P +TY S+I +CR G + + +++ EM K + V ++ ++ + + G
Sbjct: 249 KIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKG 308
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL-------------EKYT 293
++ +A + M +G +P++ +N+L+ +HG R+L YT
Sbjct: 309 KMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYT 368
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+I Y + D V +NE R V+D + ++ K +I
Sbjct: 369 ILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRIS 416
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL K R E + F +M+ K ++ D +Y+SLI + A ELF
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTIN 426
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G ++ + L+ + + ++ +E+ + M L + +++NG+ K +
Sbjct: 427 NDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIR 486
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + + S+ P +TY S+ + C+ G S A ++F M G V Y+ ++
Sbjct: 487 EAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLL 546
Query: 243 AMYGK 247
+ K
Sbjct: 547 DAFCK 551
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 131/268 (48%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M + G+ ++ Y ++ + + G+ +F + K+++ P + Y L L
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT--KVNVLPD-LYCYNSLIFGL 407
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR E K+F M+E+G+L + Y+ LI + +++ AE+L + + G+ +
Sbjct: 408 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 467
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+++ L+ Y + +EK +SM + + + + I ++++ S AA +V +
Sbjct: 468 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSE 527
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G +P Y+S+I+ C+ KA + EM +KG D +V Y++++ K+G
Sbjct: 528 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 587
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
I A + + KG PN Y SL+D
Sbjct: 588 ISYARNVFNSILAKGLVPNCVTYTSLID 615
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 135/290 (46%), Gaps = 8/290 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYKIL 66
Y+ +M+ G++ + Y ++ + K GD E L R LD L P+ +Y L
Sbjct: 419 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV----QRMLDTGLKPNDV-IYIDL 473
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+S KS ++ F+ M ++G++ D +Y LI + +S ++ A + E E+ G
Sbjct: 474 LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGS 533
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ V+ L+ + EK +++ M ++ + +++G K A
Sbjct: 534 VPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARN 593
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+ ++++G +P VTY S+I+ C++G S A ++ EM G YS +
Sbjct: 594 VFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCS 653
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
G + AM L+ +M +G ++ +N+L+D + +++ K VI
Sbjct: 654 SAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVI 702
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 3/276 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M AGI D Y ++EA+ K+ + + + +E R L +T Y +L L
Sbjct: 106 EFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGL---NTVTYNVLIAGL 162
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+SG E F +DM++ G++ D Y +LI A+ L E + ++
Sbjct: 163 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 222
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
V+ L+ ++ EG ++ ++++ M A + + +V G K A + +Q
Sbjct: 223 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 282
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ P +TY II + R A ++ EM+ G V YS M+ ++G
Sbjct: 283 MVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 342
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
A L+ +M KG +PN ++Y L+ + R N+
Sbjct: 343 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 378
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 123/277 (44%), Gaps = 5/277 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ + M+ G+V D Y ++ K S + AL E +L + +Y L D
Sbjct: 174 FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELK---PNVVVYANLID 230
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ G A E K ++M G+ + Y +L+ + ++ A L K+
Sbjct: 231 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 290
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + ++ + + ++ M+NA ++ + ++++G + A +
Sbjct: 291 DTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 350
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ ++G P YA +I+ YCR G S A ++F +M + + Y+S++ K
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 410
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
GR+ ++ + A+M+ +G PN + Y+ L +HG KN
Sbjct: 411 GRVEESTKYFAQMQERGLLPNEFTYSGL--IHGYLKN 445
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 123/298 (41%), Gaps = 28/298 (9%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N ++ +++ G V D Y ++ K D EK + E + +D +
Sbjct: 517 NMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD---PNIV 573
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D L KSG F + KG++ + Y SLI + ++ A L+ E
Sbjct: 574 CYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEM 633
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRA 180
G+ D V+ L G +E+ + ++E M +IS + +V+GF KR
Sbjct: 634 LATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNN--LVDGFCKRGK 691
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+K+ ++ +G +P +T +II+ G S+ +F+E+QQK + +SS
Sbjct: 692 MQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSS 751
Query: 241 ------------------MVAMYGKTGRIRDAMRL----VAKMKPKGCEPNVWIYNSL 276
M+ + K G + A+ L VAK P GC + I ++L
Sbjct: 752 LFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNL 809
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%)
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
R V LV Y + G V+ EVV M++ L S ++ + A KV
Sbjct: 45 RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKV 104
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
E ++ G P TY+++I AYC++ + A+KV +EM+++G V Y+ ++A +
Sbjct: 105 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 164
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+G + +A M+ G P+ + Y +L++
Sbjct: 165 SGAVEEAFGFKKDMEDYGLVPDGFTYGALIN 195
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 16/118 (13%)
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--------- 291
+V Y K+GR++DA +V M+ +G P++ N+L+ RA + L K
Sbjct: 53 LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112
Query: 292 -------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+T+I AY REFD K E R G ++ +++ + +EE
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 151/358 (42%), Gaps = 25/358 (6%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF---LECESRKLDLTPSSTH 61
+ L M G ++ YC ++ FY+ GD+++ LF LEC L P T
Sbjct: 243 AALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECC-----LCPDVTT 297
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
K L +L K G E + F + ++G+ + + I + A L
Sbjct: 298 FNK-LVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCV 356
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ D+ + ++ + V + E + M N +D I++G+ K+
Sbjct: 357 SREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMV 416
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++ + + +G P + TY S++N +C+ G +A VF + KG ++ Y+++
Sbjct: 417 VDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTL 476
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------------MHGRAKN--- 285
+ + G I A++L+ +M KGC+P++W YN +++ + G A
Sbjct: 477 IKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGC 536
Query: 286 LRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ + Y T++ Y + D ++ N G D ++ K ++ EE+
Sbjct: 537 IPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEV 594
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 129/312 (41%), Gaps = 39/312 (12%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G D YC ++ F + GD ++ A+F + + L S +Y L L + G
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLR---PSIIVYNTLIKGLCQQGLI 486
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
L+ +M EKG D Y +I + + A L +A KG + D+ + L
Sbjct: 487 LPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTL 546
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
V Y + ++ +E+V M + + ++NG K +++++ + +GC
Sbjct: 547 VDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGC 606
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG------- 249
P +TY +II + C ++A + EM+ KG VV++ +++ + K G
Sbjct: 607 APNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYG 666
Query: 250 -----------------------------RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
++ A+RL ++MK GC+P+ + Y L+D
Sbjct: 667 LFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGF 726
Query: 281 GRAKNLRQLEKY 292
+ N+ Q K+
Sbjct: 727 CKTGNVNQGYKF 738
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 127/332 (38%), Gaps = 52/332 (15%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D K G + + +D KG D Y SL+ F + A +FK+
Sbjct: 403 YNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGL 462
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ + V+ L+ ++G++ L+++ M +I+NG K
Sbjct: 463 GKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLS 522
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + I++GCIP TY ++++ YCR A ++ M +G V+ Y++++
Sbjct: 523 DANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLL 582
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM------------------------- 277
KT + + M + M KGC PN+ YN+++
Sbjct: 583 NGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLT 642
Query: 278 -----------------DMHGRAKNLRQLEK----------YTTVISAYNMAREFDMCVK 310
D+ G R +EK Y +ISA++ M ++
Sbjct: 643 PDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALR 702
Query: 311 FYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++E + NG D +++ F K + +
Sbjct: 703 LFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQ 734
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 116/254 (45%), Gaps = 3/254 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y IM + G + +++ + +K++ S + Y I S ++GR + L+ R
Sbjct: 193 YNAIMNILVEFGYFNQAHKVYMRMKDKKVE---SDVYTYTIRIKSFCRTGRPYAALRLLR 249
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M G + Y +++ F + A ELF E E + D+ F KLV ++G
Sbjct: 250 NMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKG 309
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
V ++ + + + + + + + G K + AV++ + +G P VTY
Sbjct: 310 FVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYN 369
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++I CR +AE+ +M GF+ Y+S++ Y K G + DA R++ K
Sbjct: 370 TVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFK 429
Query: 265 GCEPNVWIYNSLMD 278
G +P+ + Y SL++
Sbjct: 430 GFKPDEFTYCSLVN 443
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TP Y L + L K+ ++ E+++ F+ M EKG + Y ++I S + +V A
Sbjct: 571 MTPDVI-TYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEA 629
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVN 173
+L E + KG+ D+ F L+ + + G ++ + M K +++ + +I++
Sbjct: 630 VDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIIS 689
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
FS++ A++++ ++ GC P TY +I+ +C+ G ++ K +E +KGF
Sbjct: 690 AFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIP 749
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ + ++ ++++A+ ++ M K P+
Sbjct: 750 SLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT 786
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV +E++ C P +Y +I+N G +++A KV++ M+ K + V Y+ +
Sbjct: 174 AVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIK 233
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
+ +TGR A+RL+ M GC N Y
Sbjct: 234 SFCRTGRPYAALRLLRNMPVLGCFSNAVAY 263
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 94/215 (43%), Gaps = 5/215 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMK---EKGILEDPSVYASLICSFASIAEVKVAEELFK 119
YK + LG G+ E+ +M+ + +LE VY + + +++ A + F+
Sbjct: 122 YKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLE--GVYVEAMRFYGRKGKIQEAVDTFE 179
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
+ + + ++ + +E G + +V MK+ ++ + + F +
Sbjct: 180 RMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTG 239
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+AA+++ + GC V Y +++ + G +A ++F EM + V ++
Sbjct: 240 RPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFN 299
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+V K G + ++ RL K+ +G PN++ +N
Sbjct: 300 KLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFN 334
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 3/159 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MKS G+ D + ++ F K+GD + LF E ++ D++ +T Y I+ +
Sbjct: 635 EMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGME-KQYDVS-HTTATYNIIISAFS 692
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ L+ F +MK+ G D Y LI F V + E EKG + L
Sbjct: 693 EQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLT 752
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
F +++ E V++ + ++ M ++ + D ++ +
Sbjct: 753 TFGRVLNCLCVEHKVQEAVGIIHLMVQKDI-VPDTVNTI 790
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV--AYSSMVAMYGKTGRIRDAMRLVA 259
TY S++ G +++ E + EM+ D ++ Y + YG+ G+I++A+
Sbjct: 121 TYKSMLQKLGFHGKFNEMENLLSEMRSN-LDNTLLEGVYVEAMRFYGRKGKIQEAVDTFE 179
Query: 260 KMKPKGCEPNVWIYNSLMDM 279
+M C+P+V+ YN++M++
Sbjct: 180 RMDLFNCDPSVYSYNAIMNI 199
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 141/294 (47%), Gaps = 9/294 (3%)
Query: 4 QSKLH----YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS 59
+++LH + E+M + + + Y +++ K G ++ AL + + P++
Sbjct: 59 ENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK---CVPTA 115
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
Y L L K+ RA E +M G + D Y +LI F + A +F+
Sbjct: 116 V-TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFE 174
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKR 178
+ +G D+ + L+ +EG +++ +++ M + + + ++ +++GF +
Sbjct: 175 QLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRM 234
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A+ + E++ G P VTY +++N +C++ A + +M +KG VV +
Sbjct: 235 GKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTF 294
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+S++ + R+ DA+ ++ +M+ K C P V+ YN+++D + RA L + K+
Sbjct: 295 TSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF 348
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 6/279 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M +G + D Y ++ F K S+ +F + +R Y L D L
Sbjct: 139 EEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR---PDVVTYSCLIDGL 195
Query: 71 GKSGRAFEILKFF-RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K GR E + F R +K + + Y SLI F + ++ A L + E G D
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + ++ +++ M L +++G + AV +
Sbjct: 256 VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILG 315
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + C P TY +I++ YCR +A K +E + VV+++ M+ K
Sbjct: 316 EMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVN 373
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
R +AM LV + + + C P+V +Y +++D R K + +
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 35/219 (15%)
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D Y SLI + ++ A + KG D+ + ++ E + + + +
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 154 ESMKNAELNISDCISCVIVNGFSK--------------RRAYWAAVKVYEQLIS------ 193
E M N L + V+++G K R+ Y LIS
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAE 129
Query: 194 --------------QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
GCIP TY ++I +C+ A +VF ++ +GF VV YS
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189
Query: 240 SMVAMYGKTGRIRDAMRLVAKM-KPKGCEPNVWIYNSLM 277
++ K GR+++A+ L +M K C PN YNSL+
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLI 228
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 123/316 (38%), Gaps = 40/316 (12%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSST 60
S L +E++ + G D Y +++ K G ++ LF R K +T
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLF----GRMIKSGSCMPNT 221
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y L + G+ E + M E G D Y +L+ F +A + A +L +
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 281
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
KG+ D+ F L+ E + + ++ M+ + + I++G+ +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A K L C P V++ +I C++ S+A ++ E +++ + VV Y++
Sbjct: 342 LEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399
Query: 241 MVAMYGKTGRIRDAMRLVAKM--KP------------------------------KGCEP 268
++ + ++ +A R+ KM +P KGC P
Sbjct: 400 VIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVP 459
Query: 269 NVWIYNSLMDMHGRAK 284
N+ YN L+D +A
Sbjct: 460 NIGTYNLLIDAFRKAN 475
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 22/266 (8%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ E+M G D Y +M F K+ + L L +RK LTP + L
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL-LNQMTRK-GLTPDVV-TFTSL 297
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L + R + + +M+ K P+VY ++ +I + +EA K M
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSC--SPTVY-----TYNTILDGYCRANQLEEAR-KFM 349
Query: 127 LRDLEVFLKLVLMYIE-EGMVE-----KTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
L +++ +V I G+ + + +E+VE + N + +++G + +
Sbjct: 350 LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKK 409
Query: 181 YWAAVKVYEQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A +VY +++ + GC+P +TY+++I C G+ +A + +IE KG + Y+
Sbjct: 410 VDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA-RGYIE---KGCVPNIGTYN 465
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKG 265
++ + K R DA L+ M +G
Sbjct: 466 LLIDAFRKANRDEDARELLDDMVQRG 491
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ G K + A+ +++S+G P TY ++I+A C +A K EM +
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----- 285
VV Y+ ++ K GR+ +A+ L++KM+ K C P YNSL+ +A+
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASEAY 135
Query: 286 -----------LRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
+ + YTT+I+ + +++ D ++ + + G D ++
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195
Query: 335 SKLSQIEE 342
K +++E
Sbjct: 196 CKEGRLKE 203
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+ C VTY S+I C++ +A +M KGF V Y++++ R+
Sbjct: 4 TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMD 278
+A + + +M + PNV Y L+D
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLID 89
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 8/297 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++KM G + Y ++ K+G++ AA+ L + + P +Y +
Sbjct: 159 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN--AAIRLLRSMEQGNCQPDVV-VYTSI 215
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + E F M +GI D Y SLI S ++ E K L + +
Sbjct: 216 IDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKI 275
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAA 184
+ D+ +F +V +EG + + +VV+ M + E N+ +++G + A
Sbjct: 276 MPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNV--VTYNALMDGHCLQSEMDEA 333
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
VKV++ ++ G P ++Y ++IN YC+I KA +F EM QK V Y++++
Sbjct: 334 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX 393
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
GR++DA+ L +M G P++ Y L+D + +L + I NM
Sbjct: 394 C-HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 449
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 6/227 (2%)
Query: 57 PSSTHMYKILCDS---LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
P + IL +S L + G AF +L + + G D + + +LI ++
Sbjct: 101 PPDVYTLNILINSFCHLNRLGFAFSVLA---KILKLGHQPDTATFTTLIRGLCVEGKIGD 157
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A LF + +G ++ + L+ + G + ++ SM+ + I++
Sbjct: 158 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIID 217
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
K R A ++ +++ QG P TY S+I++ C + + + +M
Sbjct: 218 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 277
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
VV +S++V K G+I +A +V M +G EPNV YN+LMD H
Sbjct: 278 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 324
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 101/217 (46%), Gaps = 1/217 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K R + F +M +K ++ + Y +L+ + ++ A LF E
Sbjct: 352 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFHEMV 410
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G + DL + L+ ++ +++ + ++++++ + ++ I ++++G +
Sbjct: 411 AHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELE 470
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AA ++ L S+G P TY +IN CR GL +A K+F+EM G Y+++
Sbjct: 471 AARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTIT 530
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ A++L+ +M +G +V L++M
Sbjct: 531 QGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM 567
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 27/190 (14%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ +K + Y + Q+ S G P T +IN++C + A V ++ + G
Sbjct: 75 LLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLG 134
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----- 285
+++++ G+I DA+ L KM +G +PNV Y +L++ + N
Sbjct: 135 HQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAI 194
Query: 286 --LRQLEK---------YTTVISAYNMAREFDMCVKFYNEF-RMNGGVIDRAMAGIMVGV 333
LR +E+ YT++I + R+ + +N F +M G GI +
Sbjct: 195 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV---TEAFNLFSKMVG-------QGISPDI 244
Query: 334 FSKLSQIEEL 343
F+ S I L
Sbjct: 245 FTYTSLIHSL 254
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 32/302 (10%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH+++K+ + G LD Y ++ KIG++ L + R LT + MY +
Sbjct: 153 LHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGR---LTEPNVVMYNTI 209
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K E F +M KGI + Y+++I F + ++ A E K +
Sbjct: 210 IDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAI 269
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR-------- 178
D+ ++ LV +EG V++ V+ + L + +++G++K
Sbjct: 270 NPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLM 329
Query: 179 ---RAYWA----------------AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
W+ A+ +Y+++ + +P VTY S+I+ C+ G S A
Sbjct: 330 GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYA 389
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ EM +G V+ Y+S++ K G++ A+ L+ KMK +G +P+++ N L +
Sbjct: 390 WDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNIL--L 447
Query: 280 HG 281
HG
Sbjct: 448 HG 449
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 129/303 (42%), Gaps = 25/303 (8%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP KIL DS K ++ R ++ K I D LI F + ++ +A
Sbjct: 60 TPPIIQFNKIL-DSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAF 118
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ + + G D L+ +G V+K L + + + ++NG
Sbjct: 119 SVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGV 178
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K AA+++ ++ + P V Y +II+ C+ L S+A +F EM KG V
Sbjct: 179 CKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANV 238
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-MH--GRAKNLRQLE-- 290
V YS+++ + G++ +A+ + +M K P+V+IYN+L+D +H G+ K + +
Sbjct: 239 VTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAV 298
Query: 291 -----------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
Y T+I Y A+ +N + G D IM+ K+ +
Sbjct: 299 IVKTCLKPNVITYNTLIDGY--AKH------VFNAVGLMGVTPDVWSYNIMINRLCKIKR 350
Query: 340 IEE 342
+EE
Sbjct: 351 VEE 353
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ + L K R E L +++M +K ++ + Y SLI + A +L E
Sbjct: 338 YNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMH 397
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG-FSKRRAY 181
++G ++ + L+ + G ++K + ++ MK+ + ++++G K +
Sbjct: 398 DRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRL 457
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++ L+ +G P TY II +C+ GL +A + +M+ G + + +
Sbjct: 458 KNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKII 517
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKG 265
+ + G A +L+ +M +G
Sbjct: 518 ICALLEKGETDKAEKLLCEMIARG 541
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 115/292 (39%), Gaps = 31/292 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M GI + Y I+ F +G + E + ++ ++Y L D+
Sbjct: 226 FSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAIN---PDVYIYNTLVDA 282
Query: 70 LGKSGRAFE-------ILK--------------------FFRDMKEKGILEDPSVYASLI 102
L K G+ E I+K F + G+ D Y +I
Sbjct: 283 LHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMI 342
Query: 103 CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN 162
I V+ A L+KE +K M+ + + L+ + G + ++++ M + +
Sbjct: 343 NRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHH 402
Query: 163 ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY-CRIGLYSKAEK 221
+ ++NG K A+ + ++ QG P T +++ C+ A+
Sbjct: 403 ANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQG 462
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
+F ++ KG+ V Y+ ++ + K G + +A L +KM+ GC PN +
Sbjct: 463 LFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITF 514
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 22/236 (9%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H + + G+ D Y ++ KI E+ L+ E + ++ P++ Y L
Sbjct: 321 HVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQK--NMVPNTV-TYNSLI 377
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D L KSGR +M ++G + Y SLI ++ A L + +++G+
Sbjct: 378 DGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQ 437
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS----------CVIVNGFSK 177
D MY ++ L + +KNA+ D + +I+ G K
Sbjct: 438 PD---------MYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCK 488
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
A + ++ GC P +T+ II A G KAEK+ EM +G K
Sbjct: 489 EGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLLK 544
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 3/257 (1%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D Y +++ F+K GD K LF E R + P Y + +L K+ +
Sbjct: 220 DVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI---PPDLVTYSSVVHALCKARAMDKAE 276
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
F R M KG+L D Y +LI ++S + K A +FKE + +L D+ L+
Sbjct: 277 AFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSL 336
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G +++ +V ++M N +++NG++ + +++ ++ G P
Sbjct: 337 CKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDI 396
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
T+ +I AY G+ KA +F EM+ G VV Y +++A + G++ DAM +
Sbjct: 397 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQ 456
Query: 261 MKPKGCEPNVWIYNSLM 277
M +G P+ + Y+ L+
Sbjct: 457 MIDQGVVPDKYAYHCLI 473
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 129/305 (42%), Gaps = 16/305 (5%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D + + +L + G + + F +M++ G+ Y ++I + I ++
Sbjct: 390 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A E F + ++G++ D + L+ + G + K E++ + N + + I+N
Sbjct: 450 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
K A +++ ++ G P V Y +++ YC +G KA +VF M G +
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD--------------M 279
VV Y ++V Y K GRI + + L +M KG +P+ +YN ++D
Sbjct: 570 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 629
Query: 280 HGRAKNLRQLEK--YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
H ++ + K Y+ V+ R FD + + E R ID M+ +
Sbjct: 630 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 689
Query: 338 SQIEE 342
++EE
Sbjct: 690 RRVEE 694
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 150/339 (44%), Gaps = 26/339 (7%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ ++ G+ +D+ +++ F + +++ + L + +L P Y IL
Sbjct: 133 LAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLH-RTPELGCVPD-VFSYNIL 190
Query: 67 CDSL---GKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEA 121
SL GKSG+A ++L+ M E G + P V Y ++I F +V A +LFKE
Sbjct: 191 LKSLCNQGKSGQADDLLRM---MAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEM 247
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++G+ DL + +V + ++K + M N + + ++ G+S +
Sbjct: 248 VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQW 307
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AV+V++++ Q +P V +++ + C+ G +A VF M KG + V +Y+ M
Sbjct: 308 KEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIM 367
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL--------------- 286
+ Y G + D L M G P+++ +N L+ + L
Sbjct: 368 LNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 427
Query: 287 -RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
+ Y TVI+A + D ++ +N+ G V D+
Sbjct: 428 KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDK 466
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 115/264 (43%), Gaps = 9/264 (3%)
Query: 17 GIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
G+ LD + I+ K+G D++ + L + + L P + +Y +L D
Sbjct: 496 GMRLDIVFFGSIINNLCKLGRVMDAQNIFDL-----TVNVGLHPDAV-VYNMLMDGYCLV 549
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+ + L+ F M GI + Y +L+ + I + LF+E +KG+ ++
Sbjct: 550 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 609
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ E G M + + ++ C +++ G K R + A+ ++++L +
Sbjct: 610 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 669
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+T ++I + +A+ +F + + G C V YS M+ K G + +
Sbjct: 670 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEE 729
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLM 277
A + + M+ GCEP+ + N ++
Sbjct: 730 AEDMFSSMQNAGCEPDSRLLNHVV 753
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 113/307 (36%), Gaps = 63/307 (20%)
Query: 43 ALFLECESRKLD---LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA 99
ALF SR L+P+S + Y IL D ++ R L FF + G+ D + +
Sbjct: 94 ALFNRAASRAQGPRVLSPTS-YTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIAS 152
Query: 100 SLICSFASIAEVKVAEE----LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
L+ F E K +E L E G + D+ + L+ +G + +++
Sbjct: 153 HLLKGFC---EAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRM 209
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
M C P V Y ++I+ + + G
Sbjct: 210 MAEG---------------------------------GTVCSPDVVAYNTVIDGFFKEGD 236
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+KA +F EM Q+G +V YSS+V K + A + +M KG P+ W YN+
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296
Query: 276 LMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
L I Y+ ++ V+ + E R + D ++G
Sbjct: 297 L-------------------IYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLC 337
Query: 336 KLSQIEE 342
K +I+E
Sbjct: 338 KYGKIKE 344
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 38/227 (16%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ M SAGI + Y ++ + KIG ++ +LF E + + ST +Y
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK---PSTILY 609
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+ D L ++GR F +M E GI + Y+ ++ A LFKE
Sbjct: 610 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE--- 666
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
LR + V + ++ ++ +I F RR A
Sbjct: 667 ---LRAMNVKIDII----------------------------TLNTMIAGMFQTRRVEEA 695
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ + G +P VTY+ +I + GL +AE +F MQ G
Sbjct: 696 K-DLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAG 741
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 10/279 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP---SST 60
S ++ ++ GI + Y ++ K ++ LF E L P
Sbjct: 161 DSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFRE------HLEPYFVPDV 214
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ + IL L + G + +FF++M G D Y +LI F + E+ +L KE
Sbjct: 215 YSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE 274
Query: 121 AEE-KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
KG+ D+ + ++ Y + G ++ E+ + M ++ + +D V+++GF K
Sbjct: 275 DMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVG 334
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+A+ +YE+++ GC+P VT+ S+I+ YCR G ++ K++ EM+ + V Y+
Sbjct: 335 NMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYA 394
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ K RIR+A + +K P +IYN ++D
Sbjct: 395 VLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVID 433
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 6/266 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +M K+G ++ +F +C R + P S+ + ++L S + G+ F
Sbjct: 112 YDLLMRNLCKVGLNDSAKIVF-DC-MRSDGILPDSS-ILELLVSSYARMGKLDSAKNFLN 168
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
++ GI P VY +L+ V A LF+E E + D+ F L+ G
Sbjct: 169 EVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIG 228
Query: 145 MVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY-EQLISQGCIPGQVT 202
++K E ++M N D +S ++NGF + + E ++ +G P +T
Sbjct: 229 EIDKAFEFFQNMGNFGC-FPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVIT 287
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y SII+ YC++G A ++F EM G ++ ++ +GK G +R AM + KM
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQ 288
GC P+V + SL+D + R + Q
Sbjct: 348 LLGCLPDVVTFTSLIDGYCREGEVNQ 373
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 127/284 (44%), Gaps = 4/284 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M+S GI+ DS ++ ++ ++G + E + ++P +Y L +
Sbjct: 132 FDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSP---FVYNNLLNM 188
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K E + FR+ E + D + LI I E+ A E F+ G D
Sbjct: 189 LVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPD 248
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVV-ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ + + K +++ E M ++ I++G+ K AA +++
Sbjct: 249 IVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELF 308
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++S G P T+ +I+ + ++G A ++ +M G VV ++S++ Y +
Sbjct: 309 DEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCRE 368
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
G + ++L +MK + PNV+ Y L++ + +R+ +
Sbjct: 369 GEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNF 412
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 113/273 (41%), Gaps = 6/273 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+++ M + G D Y ++ F ++ + K L E K ++P I+
Sbjct: 234 FEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIK-GVSPDVITYTSII 292
Query: 67 CD--SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
LG A E+ F +M GI + + LI F + ++ A ++++
Sbjct: 293 SGYCKLGDMKAASEL---FDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G L D+ F L+ Y EG V + L++ E MK L+ + V++N K A
Sbjct: 350 GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREA 409
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
L S +P Y +I+ +C+ G +A + EMQ+K + ++ ++
Sbjct: 410 RNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG 469
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ +A+ KM C P+ NSL+
Sbjct: 470 NCMKGRMVEAISTFYKMIEINCVPDEITINSLI 502
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 121/334 (36%), Gaps = 87/334 (26%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y +L +L K G F M+ GIL D S+ L+ S+A + ++ A+ E
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G+ V+ L+ M +++ +V++
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDE-------------------------------- 197
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ------------ 228
AV ++ + + +P ++ +I CRIG KA + F M
Sbjct: 198 ---AVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 254
Query: 229 ------------------------KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
KG V+ Y+S+++ Y K G ++ A L +M
Sbjct: 255 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314
Query: 265 GCEPNVWIYNSLMDMHGRAKNLR----------------QLEKYTTVISAYNMAREFDMC 308
G +PN + +N L+D G+ N+R + +T++I Y E +
Sbjct: 315 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 374
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+K + E ++ + +++ K ++I E
Sbjct: 375 LKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ + Y I++ K+GD+ V+AL L + ++ + +Y + D L
Sbjct: 206 DRMLEDGLQPNQITYGTIVDGMCKMGDT--VSALNLLRKMEEVSHIIPNVVIYNTIIDGL 263
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR + F +M+EK I D Y +I F AE+L +E E+ + D+
Sbjct: 264 WKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDV 323
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +++EG + E+ + M + S +++GF K+ AA ++
Sbjct: 324 VTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYL 383
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++GC P +T+ ++I YCR K+ EM + G + Y++++ + + G
Sbjct: 384 TPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 443
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ A L+ +M G PNV N+L+D
Sbjct: 444 LNAAQDLLQEMISSGVCPNVVTCNTLLD 471
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 144/361 (39%), Gaps = 30/361 (8%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ + +M+ I D Y ++ F G L E RK++ + L
Sbjct: 274 NLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKIN---PDVVTFSALI 330
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++ K G+ FE + + +M + I+ Y+S+I F + AE +F KG
Sbjct: 331 NAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCS 390
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ F L+ Y V+ ++++ M A L + +++GF + AA +
Sbjct: 391 PDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDL 450
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ-----------KGFDKCVV 236
+++IS G P VT ++++ C G A ++F MQ+ G + V
Sbjct: 451 LQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQ 510
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
Y+ ++ G+ +A L +M +G P+ Y+S++D + L + +
Sbjct: 511 TYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 570
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
+ T+I+ Y A D ++ + E G V D ++ F K+ I
Sbjct: 571 GSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNI 630
Query: 341 E 341
+
Sbjct: 631 D 631
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 123/304 (40%), Gaps = 54/304 (17%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M AG+V ++ Y ++ F ++GD L E S + P+ +L D L
Sbjct: 417 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGV--CPNVVTCNTLL-DGL 473
Query: 71 GKSGRAFEILKFFRDMKE-----------KGILEDPSVYASLICSFASIAEVKVAEELFK 119
+G+ + L+ F+ M++ G+ D Y LIC + + AEEL++
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYE 533
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E +G++ D + ++ +G K+
Sbjct: 534 EMPHRGIVPDTITYSSMI-----------------------------------DGLCKQS 558
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A ++++ + S+ P VT+ ++I YC+ G+ ++F EM Q+G + Y
Sbjct: 559 RLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYI 618
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPN-VWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
+++ + K I A+ + +M G P+ + I N L + + +LE+ ++
Sbjct: 619 TLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSK----EELERAVAMLED 674
Query: 299 YNMA 302
M+
Sbjct: 675 LQMS 678
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 8/196 (4%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ L+ F S +++ A F + + G + F L+ E + + L++ M
Sbjct: 119 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMC 178
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ ++NG + AV + ++++ G P Q+TY +I++ C++G
Sbjct: 179 KPNV----VTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 234
Query: 218 KAEKVFIEMQQ-KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A + +M++ VV Y++++ K GR DA L +M+ K P++ YN +
Sbjct: 235 SALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCM 294
Query: 277 MD---MHGRAKNLRQL 289
++ + GR + QL
Sbjct: 295 INGFCISGRWSDAEQL 310
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M GIV D+ Y +++ K ++ +F S+ +P + L
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS--FSPDVV-TFNTLITG 588
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+G + L+ F +M ++GI+ D Y +LI F + + A ++F+E G+ D
Sbjct: 589 YCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPD 648
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMK 157
++ + +E+ + ++E ++
Sbjct: 649 TITIRNMLTGLWSKEELERAVAMLEDLQ 676
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL L K + +M ++ +L D VYA+L+ F + A +LF+
Sbjct: 451 IYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 510
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
EKGM + + ++ Y + GM++ + + MK L + +++G+ K+
Sbjct: 511 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 570
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K++ +++ C P VTY S+IN +CR G ++ K+F EMQ G VV YS +
Sbjct: 571 DGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSIL 630
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+ + K ++ DA +M C PN +N L++ G +KN
Sbjct: 631 IGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVN--GFSKN 672
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 154/348 (44%), Gaps = 25/348 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF---LECESRKLDLTPSSTHMYKILCD 68
+M S G+ ++ Y I++A YK G K +EC + +T Y L
Sbjct: 299 EMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVT------YNTLIS 352
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ G+ E + KG++ + Y LI ++ A E E+G
Sbjct: 353 GSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKP 412
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
DL + LV + G V+ L + E M + I ++++G K+ AA +
Sbjct: 413 DLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLL 472
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ Q +P YA++++ + R G +A K+F +KG + +V Y++M+ Y K
Sbjct: 473 AEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKF 532
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLEK---------Y 292
G ++DAM + +MK + P+ + Y++++ D+ G K R++ K Y
Sbjct: 533 GMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTY 592
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
T++I+ + + +K + E + G V + I++G F K +++
Sbjct: 593 TSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKL 640
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D K G F ++K KG L Y ++I F + K + L E
Sbjct: 242 YNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMN 301
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G+ +++V+ ++ + G + K +E +E M +++G +
Sbjct: 302 SRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVS 361
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ EQ + +G +P + +Y +I+AYC+ G Y +A IEM ++G +V Y ++V
Sbjct: 362 EADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALV 421
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G + A+ + KM +G P+ IYN LM
Sbjct: 422 HGLVVAGEVDVALTIREKMLERGVFPDAGIYNILM 456
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 2/217 (0%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
I+ L K G+ E K D +G + + Y +LI + ++++A LF E + K
Sbjct: 209 IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK 268
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G L +E + ++ + ++G + ++ M + L ++ + I++ K A
Sbjct: 269 GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 328
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V+ E +I GC P VTY ++I+ CR G S+A+++ + KG +Y+ ++
Sbjct: 329 VETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHA 388
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
Y K G A + +M +G +P++ Y +L +HG
Sbjct: 389 YCKQGGYDRASNWLIEMTERGHKPDLVTYGAL--VHG 423
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 6/156 (3%)
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + +KL + I + ++ LE+ + N S +C++V G K K+ E
Sbjct: 172 LNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYS---TCIMVKGLCKEGKLEEGRKLIE 228
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
QGCIP + Y ++I+ YC+ G A +FIE++ KGF V Y +++ + K G
Sbjct: 229 DRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKG 288
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGR 282
+ RL+ +M +G NV +YN+++D HG
Sbjct: 289 DFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGH 324
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 138/317 (43%), Gaps = 26/317 (8%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M ++ D+ Y +++ F + G+ ++ LF E K + P Y +
Sbjct: 474 EMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLF-ELTIEK-GMNPGIVG-YNAMIKGYC 530
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G + + MK++ + D Y+++I + ++ A+++F+E + ++
Sbjct: 531 KFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVV 590
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + +G + ++L++ M+ L + +++ F K A +E++
Sbjct: 591 TYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEM 650
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEK--------------VFIEMQQKGFDKCVVA 237
+ C+P VT+ ++N + + G + +EK F M G+ A
Sbjct: 651 LMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAA 710
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEKYTT 294
Y+S++ + G R A++L KM KGC P+ + +L+ + GR+K ++
Sbjct: 711 YNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSK------EWKN 764
Query: 295 VISAYNMAREFDMCVKF 311
++S RE + V +
Sbjct: 765 IVSCNLNERELQIAVNY 781
>gi|9755886|emb|CAC01940.1| 67kD chloroplastic RNA-binding protein, P67.1 [Raphanus sativus]
Length = 700
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 150/336 (44%), Gaps = 21/336 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y M+ F K D EK LF E R + + L + G +++F
Sbjct: 176 YNVTMKVFRKSKDLEKSEKLFDEMLQRGVK---PDNATFTTLISCARQCGLPKRAVEWFE 232
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M G+ D A++I ++ V++A L+ A + D F L+ +Y G
Sbjct: 233 KMPSFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAG 292
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ L + E MK+ + + I +++ K + W A +++ LIS G P TYA
Sbjct: 293 NYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYA 352
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++I AY R A ++ +M+ KG + V+ Y+++++M G + +A + MK
Sbjct: 353 ALIRAYGRARYGEDALVIYRQMKGKGLELTVILYNTLLSMCADIGYVDEAFEIFQDMKSS 412
Query: 265 G-CEPNVWIYNSLMDMH---GRAKN----LRQLEK---------YTTVISAYNMAREFDM 307
G CEP+ W ++SL+ ++ GR LR++ + T++I Y A++ D
Sbjct: 413 GTCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQVDD 472
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
V+ + + G D G ++ V ++ + EE+
Sbjct: 473 VVRTFEQVLELGIEPDDRFCGCLLNVMTQ-TPTEEI 507
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 72/263 (27%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ YE+MKS G+ K +L +Y L
Sbjct: 298 LNIYEEMKSLGV---------------------------------KPNLV-----IYNRL 319
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DS+GK+ R ++ +D+ G + S YA+LI ++ + A ++++ + KG+
Sbjct: 320 LDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARYGEDALVIYRQMKGKGL 379
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ ++ L+ M + G V++ E+ + MK+
Sbjct: 380 ELTVILYNTLLSMCADIGYVDEAFEIFQDMKS---------------------------- 411
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
S C P T++S+I Y G S+AE EM++ GF+ + +S++ YG
Sbjct: 412 ------SGTCEPDSWTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYG 465
Query: 247 KTGRIRDAMRLVAKMKPKGCEPN 269
K ++ D +R ++ G EP+
Sbjct: 466 KAKQVDDVVRTFEQVLELGIEPD 488
>gi|357123699|ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 492
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 139/292 (47%), Gaps = 3/292 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH M++AG+ + Y +++ A + G + + AL LE R L L P + H Y L
Sbjct: 73 LHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEM--RHLGLRPDAAH-YNAL 129
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L + M + G+ + Y L+ ++A ++ + + E + +G+
Sbjct: 130 LEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGI 189
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + LV +Y + GM +K +++ M+ + + I +++ F K A +
Sbjct: 190 QLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARR 249
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++E++ ++G P T+ ++I +CR+G +A + F MQ++G + S+++ G
Sbjct: 250 LFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRLG 309
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
+ G+ + +L KM+ +G + + +Y L+D++G+ R + + A
Sbjct: 310 EQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKA 361
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 7/260 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILCDS 69
+M+ G+ LD Y +++ F K G LF + E K D+ + + + C
Sbjct: 218 EMQELGVELDVKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWNA-LIRWHC-R 275
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+G RA L+FF M+E+G+ DP ++ S+I + ++LF + +G+
Sbjct: 276 VGNMKRA---LRFFAAMQEEGMYPDPKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKES 332
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V+ LV +Y + G E V ++K EL++S I CV+ N ++++ V V +
Sbjct: 333 GAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLSPSIFCVLANAYAQQGLCEQTVNVLQ 392
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ ++G P V +INA+ G + +A VF ++ G VV Y++++ + +
Sbjct: 393 LMEAEGIEPNLVMLNLLINAFSTAGRHLEAVAVFQHIKDSGMSPDVVTYTTLMKGFMRVK 452
Query: 250 RIRDAMRLVAKMKPKGCEPN 269
+ + +M+ GC P+
Sbjct: 453 KFEKVSEVYNEMERAGCTPD 472
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 135/304 (44%), Gaps = 52/304 (17%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+ PS+ Y L +L ++GR E +M+ G+ D + Y +L+ + A + +A
Sbjct: 84 MRPSAA-AYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHLCLA 142
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+ L + + G+ R+ ++ L+ Y G +E + V+ MK
Sbjct: 143 DRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMK----------------- 185
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
RR QL + G Y++++ Y G++ KA + +EMQ+ G +
Sbjct: 186 ---RRGI--------QLDTAG-------YSTLVRLYRDNGMWKKATDLIMEMQELGVELD 227
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--- 291
V Y+ ++ +GK G++ DA RL KM+ +G +P++ +N+L+ H R N+++ +
Sbjct: 228 VKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFA 287
Query: 292 -------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
+ ++IS ++D K +++ R G A+ ++V ++ +
Sbjct: 288 AMQEEGMYPDPKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYG 347
Query: 339 QIEE 342
+ +
Sbjct: 348 RFRD 351
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
++ V + + G P YA +I A R G +AE + +EM+ G Y++++
Sbjct: 72 SLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLE 131
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ A RL+ +M G N Y L+D + RA L
Sbjct: 132 GLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRL 174
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 10/279 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP---SST 60
S ++ ++ GI + Y ++ K ++ LF E L P
Sbjct: 161 DSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFRE------HLEPYFVPDV 214
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ + IL L + G + +FF++M G D Y +LI F + E+ +L KE
Sbjct: 215 YSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE 274
Query: 121 AEE-KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
KG+ D+ + ++ Y + G ++ E+ + M ++ + +D V+++GF K
Sbjct: 275 DMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVG 334
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+A+ +YE+++ GC+P VT+ S+I+ YCR G ++ K++ EM+ + V Y+
Sbjct: 335 NMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYA 394
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ K RIR+A + +K P +IYN ++D
Sbjct: 395 VLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVID 433
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 6/266 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +M K+G ++ +F +C R + P S+ + ++L S + G+ F
Sbjct: 112 YDLLMRNLCKVGLNDSAKIVF-DC-MRSDGILPDSS-ILELLVSSYARMGKLDSAKNFLN 168
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
++ GI P VY +L+ V A LF+E E + D+ F L+ G
Sbjct: 169 EVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIG 228
Query: 145 MVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY-EQLISQGCIPGQVT 202
++K E ++M N D +S ++NGF + + E ++ +G P +T
Sbjct: 229 EIDKAFEFFQNMGNFGC-FPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVIT 287
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y SII+ YC++G A ++F EM G ++ ++ +GK G +R AM + KM
Sbjct: 288 YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQ 288
GC P+V + SL+D + R + Q
Sbjct: 348 LLGCLPDVVTFTSLIDGYCREGEVNQ 373
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 127/284 (44%), Gaps = 4/284 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M+S GI+ DS ++ ++ ++G + E + ++P +Y L +
Sbjct: 132 FDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSP---FVYNNLLNM 188
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K E + FR+ E + D + LI I E+ A E F+ G D
Sbjct: 189 LVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPD 248
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVV-ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ + + K +++ E M ++ I++G+ K AA +++
Sbjct: 249 IVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELF 308
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++S G P T+ +I+ + ++G A ++ +M G VV ++S++ Y +
Sbjct: 309 DEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCRE 368
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
G + ++L +MK + PNV+ Y L++ + +R+ +
Sbjct: 369 GEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNF 412
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 113/273 (41%), Gaps = 6/273 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+++ M + G D Y ++ F ++ + K L E K ++P I+
Sbjct: 234 FEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIK-GVSPDVITYTSII 292
Query: 67 CD--SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
LG A E+ F +M GI + + LI F + ++ A ++++
Sbjct: 293 SGYCKLGDMKAASEL---FDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G L D+ F L+ Y EG V + L++ E MK L+ + V++N K A
Sbjct: 350 GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREA 409
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
L S +P Y +I+ +C+ G +A + EMQ+K + ++ ++
Sbjct: 410 RNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG 469
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ +A+ KM C P+ NSL+
Sbjct: 470 NCMKGRMVEAISTFYKMIEINCVPDEITINSLI 502
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 121/334 (36%), Gaps = 87/334 (26%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y +L +L K G F M+ GIL D S+ L+ S+A + ++ A+ E
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G+ V+ L+ M +++ +V++
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDE-------------------------------- 197
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ------------ 228
AV ++ + + +P ++ +I CRIG KA + F M
Sbjct: 198 ---AVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 254
Query: 229 ------------------------KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
KG V+ Y+S+++ Y K G ++ A L +M
Sbjct: 255 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314
Query: 265 GCEPNVWIYNSLMDMHGRAKNLR----------------QLEKYTTVISAYNMAREFDMC 308
G +PN + +N L+D G+ N+R + +T++I Y E +
Sbjct: 315 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 374
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+K + E ++ + +++ K ++I E
Sbjct: 375 LKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 141/294 (47%), Gaps = 9/294 (3%)
Query: 4 QSKLH----YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS 59
+++LH + E+M + + + Y +++ K G ++ AL + + P++
Sbjct: 59 ENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK---CVPTA 115
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
Y L L K+ RA E +M G + D Y +LI F + A +F+
Sbjct: 116 V-TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFE 174
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKR 178
+ +G D+ + L+ +EG +++ +++ M + + + ++ +++GF +
Sbjct: 175 QLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRM 234
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A+ + E++ G P VTY +++N +C++ A + +M +KG VV +
Sbjct: 235 GKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTF 294
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+S++ + R+ DA+ ++ +M+ K C P V+ YN+++D + RA L + K+
Sbjct: 295 TSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF 348
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 6/279 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M +G + D Y ++ F K S+ +F + +R Y L D L
Sbjct: 139 EEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR---PDVVTYSCLIDGL 195
Query: 71 GKSGRAFEILKFF-RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K GR E + F R +K + + Y SLI F + ++ A L + E G D
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + ++ +++ M L +++G + AV +
Sbjct: 256 VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILG 315
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + C P TY +I++ YCR +A K +E + VV+++ M+ K
Sbjct: 316 EMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVN 373
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
R +AM LV + + + C P+V +Y +++D R K + +
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 118/278 (42%), Gaps = 9/278 (3%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSST 60
S L +E++ + G D Y +++ K G ++ LF R K +T
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLF----GRMIKSGSCMPNT 221
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y L + G+ E + M E G D Y +L+ F +A + A +L +
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 281
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
KG+ D+ F L+ E + + ++ M+ + + I++G+ +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A K L C P V++ +I C++ S+A ++ E +++ + VV Y++
Sbjct: 342 LEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399
Query: 241 MVAMYGKTGRIRDAMRLVAKM-KPKGCEPNVWIYNSLM 277
++ + ++ +A R+ KM + GC PN Y++L+
Sbjct: 400 VIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLV 437
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 35/219 (15%)
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D Y SLI + ++ A + KG D+ + ++ E + + + +
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 154 ESMKNAELNISDCISCVIVNGFSK--------------RRAYWAAVKVYEQLIS------ 193
E M N L + V+++G K R+ Y LIS
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAE 129
Query: 194 --------------QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
GCIP TY ++I +C+ A +VF ++ +GF VV YS
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189
Query: 240 SMVAMYGKTGRIRDAMRLVAKM-KPKGCEPNVWIYNSLM 277
++ K GR+++A+ L +M K C PN YNSL+
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLI 228
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 22/266 (8%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ E+M G D Y +M F K+ + L L +RK LTP + L
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL-LNQMTRK-GLTPDVV-TFTSL 297
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L + R + + +M+ K P+VY ++ +I + +EA K M
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSC--SPTVY-----TYNTILDGYCRANQLEEAR-KFM 349
Query: 127 LRDLEVFLKLVLMYIE-EGMVE-----KTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
L +++ +V I G+ + + +E+VE + N + +++G + +
Sbjct: 350 LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKK 409
Query: 181 YWAAVKVYEQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A +VY +++ + GC+P +TY++++ C G+ +A + +IE KG + Y+
Sbjct: 410 VDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA-RGYIE---KGCVPNIGTYN 465
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKG 265
++ + K R DA L+ M +G
Sbjct: 466 LLIDAFRKANRDEDARELLDDMVQRG 491
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ G K + A+ +++S+G P TY ++I+A C +A K EM +
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----- 285
VV Y+ ++ K GR+ +A+ L++KM+ K C P YNSL+ +A+
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASEAY 135
Query: 286 -----------LRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
+ + YTT+I+ + +++ D ++ + + G D ++
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195
Query: 335 SKLSQIEE 342
K +++E
Sbjct: 196 CKEGRLKE 203
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+ C VTY S+I C++ +A +M KGF V Y++++ R+
Sbjct: 4 TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMD 278
+A + + +M + PNV Y L+D
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLID 89
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 131/285 (45%), Gaps = 6/285 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M + G D Y ++ K GD++ L + E KL+ +Y + D L
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE---PGVLIYNTIIDGL 266
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + L F++M+ KGI + Y+SLI + A L + E+ + D+
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +++EG + + ++ + M ++ S ++NGF A +++E
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++S+ C P VTY ++I +C+ + +VF EM Q+G V Y+ ++ + G
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
A + +M G PN+ YN+L+D G KN +LEK V
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLD--GLCKN-GKLEKAMVV 488
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 128/273 (46%), Gaps = 7/273 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ +++M++ GI + Y ++ G + L + RK++ + L
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN---PDVFTFSAL 332
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
D+ K G+ E K + +M ++ I DPS+ Y+SLI F + A+++F+ K
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSI--DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D+ + L+ + + VE+ +EV M L + +++ G + A
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++++++S G P +TY ++++ C+ G KA VF +Q+ + + Y+ M+
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++ D L + KG +P+V YN+++
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 131/285 (45%), Gaps = 6/285 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M++ GI + Y ++ F + S+ AL + + KL P+ + +L +
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCR--RSQLPLALAVLGKMMKLGYEPNIVTLSSLL-NGY 161
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
S R E + M G + + +LI + A L KG DL
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V + G + ++ M+ +L I I++G K + A+ ++++
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ ++G P VTY+S+I+ C G +S A ++ +M ++ + V +S+++ + K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEKY 292
+ +A +L +M + +P++ Y+SL++ MH R +Q+ ++
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 95/203 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L K R E ++ FR+M ++G++ + Y LI + +A+E+FKE
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ ++ + L+ + G +EK + V E ++ +++ + +++ G K
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ L +G P V Y ++I+ +CR G +A+ +F EM++ G Y++++
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ G + L+ +M+ G
Sbjct: 579 RARLRDGDREASAELIKEMRSCG 601
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
Query: 108 IAEVKV--AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD 165
++E+K+ A LF E + + F KL+ + + + + E M+N + +
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 166 CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
+++N F +R A+ V +++ G P VT +S++N YC S+A + +
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 226 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
M G+ V +++++ + +AM L+ +M KGC+P++ Y +++
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S G+ + Y +++ K G EK +F + K++ T + Y I+ +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT---IYTYNIMIEG 510
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K+G+ + F ++ KG+ D Y ++I F + A+ LFKE +E G L +
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+ L+ + +G E + E+++ M++
Sbjct: 571 SGCYNTLIRARLRDGDREASAELIKEMRS 599
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCD 68
+ K S G V Y I++ F K G+ + ++ E CE + +TPS T Y L D
Sbjct: 377 FNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCE---VGITPS-TVTYTSLID 432
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K LK DMK KG+ D Y +LI F ++K A EL E G+
Sbjct: 433 GFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSP 492
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ ++ ++ + VE+ +++ + M N + +++G K A ++
Sbjct: 493 NRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIH 552
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++S+G +P + +IN C G + A K+ +M K V+ Y++++A + K
Sbjct: 553 TEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKE 612
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G +++A RL +M +G P+ Y+ L++
Sbjct: 613 GNLQEAFRLHDEMLDRGLVPDNITYDILVN 642
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 150/341 (43%), Gaps = 23/341 (6%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + +Y +MK+ GI I+E + K + +F + L+ ++
Sbjct: 195 NIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMF----NDALESGLANVF 250
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ L L K G+ E + ++ KGI + Y ++I + A +++KE
Sbjct: 251 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 310
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G + F L+ Y ++G +E + MK+A + +D +I+ G K
Sbjct: 311 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 370
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ ++ + +SQG +P + Y +II+ + + G + A V+ EM + G V Y+S+
Sbjct: 371 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSL 430
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ + K I A++L+ MK KG + ++ Y +L+D + ++++ SA+
Sbjct: 431 IDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMK---------SAH-- 479
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ NE R G +R + M+ F ++ +EE
Sbjct: 480 --------ELLNELRGAGLSPNRFIYNSMITGFKNMNNVEE 512
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 142/323 (43%), Gaps = 40/323 (12%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + Y++M G ++ + +M+ ++K GD E ++F + ++ P+ T
Sbjct: 299 NINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHR--MKDANILPTDTT 356
Query: 62 MYKILCDSLGKSGRAFEILKFF-----------------------------------RDM 86
+ I+ L K+GR+FE F R+M
Sbjct: 357 L-GIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM 415
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
E GI Y SLI F + +A +L + + KG+ D++ + L+ + + +
Sbjct: 416 CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDM 475
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV-TYAS 205
+ E++ ++ A L+ + I ++ GF A+ +Y++++++G IP + TY S
Sbjct: 476 KSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG-IPCDLKTYTS 534
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+I+ + G A + EM KG A++ ++ G+ +A +++ M K
Sbjct: 535 LIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKN 594
Query: 266 CEPNVWIYNSLMDMHGRAKNLRQ 288
P+V IYN+L+ H + NL++
Sbjct: 595 MIPSVLIYNTLIAGHFKEGNLQE 617
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 140/351 (39%), Gaps = 20/351 (5%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L + M + G ++ +M+ + G+ +AL L E + L P+
Sbjct: 125 NVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLR--SALVLVNEISESGLVPNKV- 181
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y +L D K+G + +F+ +MK KGI S++ + + A +F +A
Sbjct: 182 TYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA 241
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G L ++ F L+ +EG + + + + + ++ + I+ G ++
Sbjct: 242 LESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AA KVY++++ G P VT+ +++ Y + G A +F M+ +
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 360
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------- 291
+ K GR + L K +G P YN+++D + N+
Sbjct: 361 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 420
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
YT++I + D+ +K N+ + G +D G ++ F K
Sbjct: 421 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCK 471
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 105/250 (42%), Gaps = 34/250 (13%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G E + F K +G+ D Y+ + A L +E G +
Sbjct: 52 KEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 111
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F ++ ++EG V + L + + M N +++ ++ ++ G+ + +A+ + ++
Sbjct: 112 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 171
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK--------------GFDKC--- 234
G +P +VTY+ +I+ C+ G KA + + EM+ K G+ KC
Sbjct: 172 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 231
Query: 235 -----------------VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V ++++++ K G++ +A L ++ KG PNV YN+++
Sbjct: 232 QNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 291
Query: 278 DMHGRAKNLR 287
H R N+
Sbjct: 292 LGHCRKDNIN 301
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 73/164 (44%), Gaps = 3/164 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+++ AG+ + Y ++ F + + E+ L+ + + + P Y L D L
Sbjct: 483 NELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI---PCDLKTYTSLIDGL 539
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
KSGR +M KGIL D + LI + + + A ++ ++ K M+ +
Sbjct: 540 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSV 599
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
++ L+ + +EG +++ + + M + L + ++VNG
Sbjct: 600 LIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 131/285 (45%), Gaps = 6/285 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M + G D Y ++ K GD++ L + E KL+ +Y + D L
Sbjct: 5 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE---PGVLIYNTIIDGL 61
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + L F++M+ KGI + Y+SLI + A L + E+ + D+
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +++EG + + ++ + M ++ S ++NGF A +++E
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++S+ C P VTY ++I +C+ + +VF EM Q+G V Y+ ++ + G
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
A + +M G PN+ YN+L+D G KN +LEK V
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLD--GLCKN-GKLEKAMVV 283
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 128/273 (46%), Gaps = 7/273 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ +++M++ GI + Y ++ G + L + RK++ + L
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN---PDVFTFSAL 127
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
D+ K G+ E K + +M ++ I DPS+ Y+SLI F + A+++F+ K
Sbjct: 128 IDAFVKEGKLVEAEKLYDEMVKRSI--DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 185
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D+ + L+ + + VE+ +EV M L + +++ G + A
Sbjct: 186 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 245
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++++++S G P +TY ++++ C+ G KA VF +Q+ + + Y+ M+
Sbjct: 246 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 305
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++ D L + KG +P+V YN+++
Sbjct: 306 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 338
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 95/203 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L K R E ++ FR+M ++G++ + Y LI + +A+E+FKE
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ ++ + L+ + G +EK + V E ++ +++ + +++ G K
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ L +G P V Y ++I+ +CR G +A+ +F EM++ G Y++++
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 373
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ G + L+ +M+ G
Sbjct: 374 RARLRDGDREASAELIKEMRSCG 396
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S G+ + Y +++ K G EK +F + K++ T + Y I+ +
Sbjct: 249 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT---IYTYNIMIEG 305
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K+G+ + F ++ KG+ D Y ++I F + A+ LFKE +E G L +
Sbjct: 306 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 365
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+ L+ + +G E + E+++ M++
Sbjct: 366 SGCYNTLIRARLRDGDREASAELIKEMRS 394
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 129/275 (46%), Gaps = 5/275 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G D Y ++ K GD++ L + E+ K++ ++ +Y + DSL
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE---ANVVIYSTVIDSL 263
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + L F +M+ KG+ + Y+SLI + A L + E+ + +L
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ ++++G + K ++ E M ++ + ++NGF A ++ E
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I + C+P VTY ++IN +C+ K ++F EM Q+G V Y++++ + +
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+A + +M G PN+ YN L+D G KN
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLD--GLCKN 476
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 127/286 (44%), Gaps = 17/286 (5%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
KL P + +L + R + + M E G D + +LI +
Sbjct: 141 KLGYEPDIVTLNSLL-NGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKA 199
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A L ++G DL + +V + G + L ++ M+ A++ + I +
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ K R A+ ++ ++ ++G P +TY+S+I+ C G +S A ++ +M ++
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL------MDMHGRAKN 285
+ +V +S+++ + K G++ A +L +M + +PN++ Y+SL +D G AK
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 286 LRQLE----------KYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
+ +L Y T+I+ + A+ D ++ + E G V
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 115/246 (46%), Gaps = 7/246 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ + +M++ G+ + Y ++ G + L + RK++ + + L
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN---PNLVTFSAL 329
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
D+ K G+ + K + +M ++ I DP++ Y+SLI F + + A+++ + K
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSI--DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRK 387
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
L ++ + L+ + + V+K +E+ M L + +++GF + R A
Sbjct: 388 DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 447
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V++Q++S G P +TY +++ C+ G +KA VF +Q+ + + Y+ M+
Sbjct: 448 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
Query: 245 YGKTGR 250
K G+
Sbjct: 508 MCKAGK 513
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 96/221 (43%), Gaps = 1/221 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
PS K+L ++ K + ++ F M+ GI + Y LI F + + +A
Sbjct: 76 PSIIEFSKLL-SAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALA 134
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L + + G D+ L+ + + + +V+ M +++G
Sbjct: 135 LLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
AV + ++++ +GC P VTY +++N C+ G A + +M+ + VV
Sbjct: 195 LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV 254
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
YS+++ K DA+ L +M+ KG PNV Y+SL+
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 131/286 (45%), Gaps = 7/286 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M SAG+ D Y ++ AF K G +K + E+ +L T Y + D
Sbjct: 348 WEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPT---IETYTSILDG 404
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G + L+ F +K G+ Y SL+ A +++ A + E G++
Sbjct: 405 YVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPS 464
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ L Y G VEK V + MK L I ++ A A +V++
Sbjct: 465 ERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQ 524
Query: 190 QLISQGCIPGQVTYASIIN-AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
Q+ G Q+TY ++++ AY R G +AE++ M++ G + Y+S++ YG +
Sbjct: 525 QITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVS 584
Query: 249 GRIRDAMRLVAKM---KPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
GR D L+AKM K +P++ YN+L+ ++ +A + + E+
Sbjct: 585 GRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEE 630
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 140/336 (41%), Gaps = 62/336 (18%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM--------- 62
+M+ G + G Y ++ F +I D EK + F +L ++P + +M
Sbjct: 261 QMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFF-----HRLKVSPQAGNMAKALDILEE 315
Query: 63 ------------YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
Y ++ D + G K + DM G+ D +Y L+ +F
Sbjct: 316 MDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGR 375
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
+ A + + E +L +E + ++ Y++ G ++K LEV + +K A L
Sbjct: 376 MDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNS 435
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+++G +K R A + ++++ G +P + Y ++ Y R G KA VF M+++
Sbjct: 436 LLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKEN 495
Query: 231 FDKCVVAYSSMV-------AMYG-----------------------------KTGRIRDA 254
+VAY +++ AM+G + GR+ +A
Sbjct: 496 LAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEA 555
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
LV+ M+ G +P+ IYNSL++ +G + +E
Sbjct: 556 EELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDME 591
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 134/281 (47%), Gaps = 22/281 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M S GI L+ +C I+ + G++E F + ++ +L P +Y + +
Sbjct: 190 EEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAE--NLVPGGI-VYNSIVQAY 246
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G + M+E+G + +Y +++ FA I + EEK +
Sbjct: 247 CQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRD-----------EEKCL---- 291
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F + + + G + K L+++E M ++ + I +I++G+++ + AA KV+E
Sbjct: 292 -SFFHRLKVSPQAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWED 350
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++S G P V Y +++A+C+ G KA V ++ + Y+S++ Y K G
Sbjct: 351 MVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGN 410
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
I+ A+ + ++K G P V YNSL+ +A RQ+E
Sbjct: 411 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKA---RQMEN 448
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 154/353 (43%), Gaps = 38/353 (10%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ + + GD A F E+ + + H+Y L + ++ +
Sbjct: 134 YGLLVDFYARHGDKVAARATF---EAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTE 190
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M +GI + +V+ S+I +AS + AE F++ + + ++ V+ +V Y + G
Sbjct: 191 EMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAG 250
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR------AYWAAVKV----------- 187
+E ++ M+ + + ++NGF++ R +++ +KV
Sbjct: 251 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKAL 310
Query: 188 --YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
E++ G P ++ YA I++ Y R G ++ A KV+ +M G +V Y+ +V +
Sbjct: 311 DILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAF 370
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LE-------------- 290
K GR+ A+ ++ ++ P + Y S++D + + N+++ LE
Sbjct: 371 CKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGV 430
Query: 291 -KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y +++S AR+ + NE NG V + + +++ +E+
Sbjct: 431 VSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEK 483
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
++P + +Y +L L K+GR F +M ++ IL D VYA+LI F + A
Sbjct: 446 VSPDAA-IYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEA 504
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
++F + EKG+ D+ ++ + GM+++ L + M L I++G
Sbjct: 505 RKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+ K++ A+K++ + C P VTY S+IN +C G +S AE+ F EMQ +
Sbjct: 565 YVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPN 624
Query: 235 VVAYSSMVAMYGK-TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
VV Y++++ + K + + A+ M C PN +N L+
Sbjct: 625 VVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 139/296 (46%), Gaps = 16/296 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL + L K G+ + +KG++ YA LI ++ E +A +L +
Sbjct: 348 YNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLA 407
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G D+ + L+ + G ++ + + + + ++ I ++++G K +
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ +++ + +P YA++I+ + R G + +A KVF +KG VV +++M+
Sbjct: 468 PAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMI 527
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK---- 291
+ ++G + +A+ + +M + P+ + Y++++D + + +++ R +EK
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCK 587
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT++I+ + +F + + + E + V + ++ F+K S E
Sbjct: 588 PNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLE 643
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 131/331 (39%), Gaps = 55/331 (16%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
I+ + G+ E K D KG + + Y ++I + + +++ A+ +FKE + K
Sbjct: 210 IMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLK 269
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI--------------------- 163
G + LE F ++ + ++G + ++E +K L +
Sbjct: 270 GFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDP 329
Query: 164 ---------SDC-----ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
+DC +++N K A + ++ +G I ++YA +I A
Sbjct: 330 AESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQA 389
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
YC+ Y A K+ +++ ++G +V Y ++ +G + DA+ + K+ +G P+
Sbjct: 390 YCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 270 VWIYNSLMDMHGRAKNLRQLEK------------------YTTVISAYNMAREFDMCVKF 311
IYN LM G K R L Y T+I + + +FD K
Sbjct: 450 AAIYNMLMS--GLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 312 YNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ G +D M+ F + ++E
Sbjct: 508 FTLSVEKGVKVDVVHHNAMIKGFCRSGMLDE 538
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 168 SCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
+C++V G K+ E +GC+P V Y +II YC++G A+ VF E++
Sbjct: 208 TCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELK 267
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
KGF + + +M+ + K G + RL+ ++K +G VW N+++D R
Sbjct: 268 LKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYR 322
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 133/302 (44%), Gaps = 27/302 (8%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGD---SEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ +M I+ D+ Y +++ F + GD + KV L +E + K+D+ + M K
Sbjct: 473 FSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVE-KGVKVDVVHHNA-MIKGF 530
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
C +SG E L M E+ ++ D Y+++I + ++ A ++F++ E+
Sbjct: 531 C----RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKC 586
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW-AAV 185
++ + L+ + +G E + M++ +L + ++ F+K + AV
Sbjct: 587 KPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAV 646
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCR----------IGLYSKAEKVFIE----MQQKGF 231
+E +++ C+P +VT+ ++ + + G +F E M+ G+
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGW 706
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQ 288
AY+S++ G ++ A L +M KG P+ + +++ + G +K R
Sbjct: 707 SDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRN 766
Query: 289 LE 290
++
Sbjct: 767 MD 768
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 133/278 (47%), Gaps = 3/278 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ +++ G+ D Y ++ A+ G E+ L S+ +P + Y + +
Sbjct: 247 FLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSK--GFSPG-VYTYNTVIN 303
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K G+ + F +M G+ D + Y SL+ + E +F + + ++
Sbjct: 304 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVP 363
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
DL F ++ ++ G ++K L S+K A L + I +++ G+ ++ A+ +
Sbjct: 364 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLR 423
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ QGC VTY +I++ C+ + +A+K+F EM ++G + ++ + K
Sbjct: 424 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKL 483
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
G +++AM L KMK K + +V YN+L+D G+ ++
Sbjct: 484 GNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDI 521
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M+S +V D C+ +M F + G+ +K AL ++ L P + +Y IL
Sbjct: 353 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK--ALMYFNSVKEAGLIPDNV-IYTILIQG 409
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G E + +M ++G D Y +++ + A++LF E E+G+ D
Sbjct: 410 YCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPD 469
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+ + + G ++ +E+ + MK + + +++GF K A +++
Sbjct: 470 SYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWA 529
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++S+ +P ++++ ++NA C G S+A +V+ EM K V+ +SM+ Y ++G
Sbjct: 530 DMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSG 589
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
D + KM +G P+ YN+L+
Sbjct: 590 NASDGEIFLEKMISEGFVPDCISYNTLI 617
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 148/338 (43%), Gaps = 25/338 (7%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSS 59
N L Y+ +K AG++ D+ Y +++ + + G + L E + +D+
Sbjct: 380 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVV--- 436
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
Y + L K E K F +M E+G+ D LI + ++ A ELFK
Sbjct: 437 --TYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFK 494
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
+ +EK + D+ + L+ + + G ++ E+ M + E+ + ++VN +
Sbjct: 495 KMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKG 554
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A +V++++IS+ P + S+I YCR G S E +M +GF ++Y+
Sbjct: 555 HLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYN 614
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPK--GCEPNVWIYNSLMDMHGRAKNLRQLE------- 290
+++ + K + A LV KM+ K G P+V+ YNS++ R +++ E
Sbjct: 615 TLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMI 674
Query: 291 ---------KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
YT++I+ + +F++E G
Sbjct: 675 ERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRG 712
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 42/271 (15%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q+ + ++KMK I LD Y +++ F K+GD + ++ + S+++ TP S
Sbjct: 485 NLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS-- 542
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ IL ++L G E + + +M K I P+V +IC+ + K
Sbjct: 543 -FSILVNALCSKGHLSEAFRVWDEMISKSI--KPTV---MICN-----------SMIKGY 585
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRA 180
G D E+FL+ + I EG V DCIS ++ GF K
Sbjct: 586 CRSGNASDGEIFLEKM---ISEGFV-----------------PDCISYNTLIYGFVKEEN 625
Query: 181 YWAAVKVYEQLISQ--GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A + +++ + G +P TY SI++ +CR +AE V +M ++G + Y
Sbjct: 626 MSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTY 685
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
+S++ + + +A R +M +G P+
Sbjct: 686 TSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 106/229 (46%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S+ ++ +L + ++ + E + F ++ KG +LI S I V++A +
Sbjct: 153 SNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRI 212
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
++E G+ ++ +V ++G +EK + ++ + +++ +S
Sbjct: 213 YQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSS 272
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ + S+G PG TY ++IN C+ G Y +A++VF EM + G
Sbjct: 273 QGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 332
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
Y S++ K G + + + M+ + P++ ++S+M + R+ NL
Sbjct: 333 YRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 381
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 136/310 (43%), Gaps = 38/310 (12%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M++ G++ Y +M + GD EK+A+L E R+L P + +Y + D+L
Sbjct: 319 EMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL---PPNVQIYNSVIDALC 375
Query: 72 K-----------------------------------SGRAFEILKFFRDMKEKGILEDPS 96
K GR E + R+ + + S
Sbjct: 376 KCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLS 435
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
Y SLI F EV VA L E E+G D+ F L+ + G V + L V E M
Sbjct: 436 SYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKM 495
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+L I V+++G K++ AA + E+++ Q P + Y ++I+ + R
Sbjct: 496 AARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESL 555
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+A K+F M+QKG VV Y++M+ Y + G + +A+ ++ M+ G P+ + Y +L
Sbjct: 556 DEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTL 615
Query: 277 MDMHGRAKNL 286
+ + + N+
Sbjct: 616 IGGYAKQGNI 625
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 102/217 (47%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
++Y +L L K +M E+ + D VY +LI F + A ++F+
Sbjct: 505 NIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEF 564
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
E+KG+ D+ + ++ Y + GM+ + +E + +M+ + ++ G++K+
Sbjct: 565 MEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGN 624
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A+ + ++ + C P V Y+S+IN YC++G AE +F M+ +G V+ Y+
Sbjct: 625 ISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTI 684
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ K ++ A M C PN + +SL+
Sbjct: 685 LIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLV 721
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 4/213 (1%)
Query: 70 LGKSGRAFEILKFFRDMKEKGI---LEDPSVYASLICSFASIA-EVKVAEELFKEAEEKG 125
L ++GR + RDM G + + +L+ ++A E K AE + E G
Sbjct: 160 LARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQRAREHHG 219
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
L +L+ + +E + ++ + M E D +CV+V G +
Sbjct: 220 TLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGL 279
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K+ E GC+P V Y +I+ YCR G + + EM+ KG VV Y ++++
Sbjct: 280 KLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWL 339
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G+ G + L+++M+ + PNV IYNS++D
Sbjct: 340 GRKGDLEKIASLLSEMRERRLPPNVQIYNSVID 372
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
LK G + + Y LI + +V L E E KG+L + + L+
Sbjct: 279 LKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSW 338
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+G +EK ++ M+ L + I +++ K R+ A+ V +Q+ + GC P
Sbjct: 339 LGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPD 398
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+T++++I+ C+ G +AE++ E + + + +Y+S++ + G + A L+
Sbjct: 399 AITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLV 458
Query: 260 KMKPKGCEPNVWIYNSLMDMHG 281
+M +G P+V + +L +HG
Sbjct: 459 EMMERGHTPDVVTFGAL--IHG 478
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 141/350 (40%), Gaps = 19/350 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L E AG V ++ Y +++ + + GD + L E E++ L T Y L
Sbjct: 279 LKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPT---VVTYGTL 335
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
LG+ G +I +M+E+ + + +Y S+I + A + K+ G
Sbjct: 336 MSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGC 395
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D F L+ +EG V++ ++ ELN + +++GF R A
Sbjct: 396 DPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASN 455
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ +++ +G P VT+ ++I+ G S+A V +M + Y+ +++
Sbjct: 456 LLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLC 515
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--------------- 291
K + A L+ +M + P+ ++Y +L+D R ++L + K
Sbjct: 516 KKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVV 575
Query: 292 -YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y +I Y + V+ + R G + D ++G ++K I
Sbjct: 576 GYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNI 625
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 109/267 (40%), Gaps = 34/267 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECES--RKLDLTPSSTHMYKILC 67
+E M+ GI D Y +++ + + G + +EC S RK+ P Y L
Sbjct: 562 FEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEA----VECMSTMRKVGRIPDE-FTYTTLI 616
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
K G L DM ++ + Y+SLI + + + AE LF E +G+
Sbjct: 617 GGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLF 676
Query: 128 RDLEVFLKLV------------LMYIEEGMVEK------TLE-VVESMKNAELNI--SDC 166
++ + L+ MY E ++ + TL +V + N+ +I S C
Sbjct: 677 PNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHC 736
Query: 167 ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
S V ++G A + ++ L++ C P Y +II + C + +A + +M
Sbjct: 737 SSTVNLHGKG------ALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKM 790
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRD 253
KG+ + S++ + G+ R+
Sbjct: 791 ANKGYKPDSATFLSLLYGFCSVGKSRE 817
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCD 68
+ K S G V Y I++ F K G+ + ++ E CE + +TPS T Y L D
Sbjct: 495 FNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCE---VGITPS-TVTYTSLID 550
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K LK DMK KG+ D Y +LI F ++K A EL E G+
Sbjct: 551 GFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSP 610
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ ++ ++ + VE+ +++ + M N + +++G K A ++
Sbjct: 611 NRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIH 670
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++S+G +P + +IN C G + A K+ +M K V+ Y++++A + K
Sbjct: 671 TEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKE 730
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G +++A RL +M +G P+ Y+ L++
Sbjct: 731 GNLQEAFRLHDEMLDRGLVPDNITYDILVN 760
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 150/341 (43%), Gaps = 23/341 (6%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + +Y +MK+ GI I+E + K + +F + L+ ++
Sbjct: 313 NIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMF----NDALESGLANVF 368
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ L L K G+ E + ++ KGI + Y ++I + A +++KE
Sbjct: 369 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 428
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G + F L+ Y ++G +E + MK+A + +D +I+ G K
Sbjct: 429 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 488
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ ++ + +SQG +P + Y +II+ + + G + A V+ EM + G V Y+S+
Sbjct: 489 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSL 548
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ + K I A++L+ MK KG + ++ Y +L+D + ++++ SA+
Sbjct: 549 IDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMK---------SAH-- 597
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ NE R G +R + M+ F ++ +EE
Sbjct: 598 --------ELLNELRGAGLSPNRFIYNSMITGFKNMNNVEE 630
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 140/315 (44%), Gaps = 40/315 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M G ++ + +M+ ++K GD E ++F + ++ P+ T + I+
Sbjct: 425 YKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM--KDANILPTDTTL-GIIIKG 481
Query: 70 LGKSGRAFEILKFF-----------------------------------RDMKEKGILED 94
L K+GR+FE F R+M E GI
Sbjct: 482 LCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPS 541
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y SLI F + +A +L + + KG+ D++ + L+ + + ++ E++
Sbjct: 542 TVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN 601
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV-TYASIINAYCRI 213
++ A L+ + I ++ GF A+ +Y++++++G IP + TY S+I+ +
Sbjct: 602 ELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG-IPCDLKTYTSLIDGLLKS 660
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G A + EM KG A++ ++ G+ +A +++ M K P+V IY
Sbjct: 661 GRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIY 720
Query: 274 NSLMDMHGRAKNLRQ 288
N+L+ H + NL++
Sbjct: 721 NTLIAGHFKEGNLQE 735
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 133/329 (40%), Gaps = 44/329 (13%)
Query: 1 TNSQSKLHYYEKMKSA-GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK------- 52
++ S L Y+E++K + C ++ ++ + LF + S K
Sbjct: 93 SDPTSALKYFERIKKKIEFAKCTDAVCILLLILTNSAETHRAQYLFDQFASGKSVRFSCL 152
Query: 53 LDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVK 112
+D T +Y D + G E + F K +G+ D Y+ +
Sbjct: 153 MDRLVECTKLYNFPLDI--QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSG 210
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
A L +E G + F ++ ++EG V + L + + M N +++ ++ ++
Sbjct: 211 YALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLM 270
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK--- 229
G+ + +A+ + ++ G +P +VTY+ +I+ C+ G KA + + EM+ K
Sbjct: 271 KGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIR 330
Query: 230 -----------GFDKC--------------------VVAYSSMVAMYGKTGRIRDAMRLV 258
G+ KC V ++++++ K G++ +A L
Sbjct: 331 SSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLW 390
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
++ KG PNV YN+++ H R N+
Sbjct: 391 DEVIAKGISPNVVSYNNIILGHCRKDNIN 419
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 73/164 (44%), Gaps = 3/164 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+++ AG+ + Y ++ F + + E+ L+ + + + P Y L D L
Sbjct: 601 NELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI---PCDLKTYTSLIDGL 657
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
KSGR +M KGIL D + LI + + + A ++ ++ K M+ +
Sbjct: 658 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSV 717
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
++ L+ + +EG +++ + + M + L + ++VNG
Sbjct: 718 LIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 3/227 (1%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D P + L D + K GR ++FF +M+ KG+ + Y +LI +F ++ ++
Sbjct: 445 DGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEK 504
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIV 172
A ELF E E G D V+ L+ + G +++ V+ MK A + D +S V++
Sbjct: 505 AMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFS-PDIVSFNVLI 563
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
NGF ++ A ++ +++ + G P VTY ++I+ + + G +S A ++ +M ++G
Sbjct: 564 NGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLV 623
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG-CEPNVWIYNSLMD 278
VV Y +++ Y G + +AM++ M PN IYN L++
Sbjct: 624 PTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 128/303 (42%), Gaps = 32/303 (10%)
Query: 2 NSQSKL-HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE----CESRKLDLT 56
NS +KL ++ KS I L ++ F G ++ V FL C SR+L
Sbjct: 138 NSHNKLLDLFKTSKSHKIPLSVNAATLLIRCF---GRAQMVDESFLVYNELCPSRRL--- 191
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
TH+ IL D L + GR + L +M + P+ I F+++++
Sbjct: 192 ---THIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIV-FSALSKRDKVGR 247
Query: 117 LFKEAEEKGMLRDL---EVF------LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI 167
E E G++ EVF +L+ G ++ +V+ + + +
Sbjct: 248 AVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLG-GVMEAA 306
Query: 168 SC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
SC ++ + R + + ++ P VT+ +IN C+ +A +VF +M
Sbjct: 307 SCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM 366
Query: 227 ---QQKGF--DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG-CEPNVWIYNSLMDMH 280
+ GF + V+ Y++++ K GR + + LV +M+ + C PN YN L+D +
Sbjct: 367 NGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGY 426
Query: 281 GRA 283
+A
Sbjct: 427 CKA 429
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 134/291 (46%), Gaps = 3/291 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +M AGI+ D Y +M+ + G ++ F E E R + + + Y L
Sbjct: 1105 LDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS---ADVYTYNSL 1161
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L ++G E+ F M ++G D + LI +V A+++ + KG
Sbjct: 1162 IHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGK 1221
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ G +E ++ ES+ + + ++ +++NG+ K + A +
Sbjct: 1222 EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFR 1281
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+E++ +G P VTY ++I A C+ G A+K+F+EMQ G + Y ++
Sbjct: 1282 FFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLC 1341
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
K G + +AM L +K +PN+ +++ L+D RA L + K IS
Sbjct: 1342 KNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEIS 1392
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 3/267 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M+ G D Y +M +G E LF R + L S Y IL +
Sbjct: 1214 ELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFS---YNILINGY 1270
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + E +FF +M+ KG+ Y +LI + V+ A++LF E + G L
Sbjct: 1271 CKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKL 1330
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + G +E+ +++ +S+K E + + ++++G + A K +++
Sbjct: 1331 STYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDE 1390
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P + Y +IN C G+ S+A K+ +M++KG + ++ ++ K
Sbjct: 1391 ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENE 1450
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM 277
I +A++L+ +M+ + P+ + + L+
Sbjct: 1451 IHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 56/258 (21%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y ++ D+L K G E L F +M GIL D VY+SL+ +K A E FKE E
Sbjct: 1088 YGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 1147
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G+ D+ + L ++G S R W
Sbjct: 1148 GRGISADVYTYNSL-----------------------------------IHGLS-RAGLW 1171
Query: 183 AAVKVYEQL-ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
V + L + +G P T+ +I+ C+ G +A+++ M+ KG + ++ Y+++
Sbjct: 1172 KEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTL 1231
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ G++ DA +L + +G + NV+ YN L I+ Y
Sbjct: 1232 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL-------------------INGYCK 1272
Query: 302 AREFDMCVKFYNEFRMNG 319
++ D +F+ E R G
Sbjct: 1273 DQKIDEAFRFFEEMRPKG 1290
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 38/197 (19%)
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
++G D +L+ + A +LF E +KG+L D + +
Sbjct: 1009 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTY-------------- 1054
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV-TYASI 206
+++NG K R A+K++E++ +G G V TY I
Sbjct: 1055 ---------------------GILINGLCKARKTGLAIKLHEKM--KGNCKGDVFTYGMI 1091
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+A C+ G+ ++A +F EM G VV YSS++ + GR+++A+ +M+ +G
Sbjct: 1092 IDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGI 1151
Query: 267 EPNVWIYNSLMDMHGRA 283
+V+ YNSL+ RA
Sbjct: 1152 SADVYTYNSLIHGLSRA 1168
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 24/294 (8%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++KM G D Y ++ K+G++ AA+ L + + P + Y +
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS--AAIRLLGSMVQKNCQP-NVFAYNTI 207
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + E F +M KGI D Y SLI + ++ E K L E + +
Sbjct: 208 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ F +V +EG V + +VV+ M + + +++G AVK
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK 327
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSK-------------------AEKVFIEMQ 227
V++ ++ +GC+P ++Y ++IN YC+I K A KVF M
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMV 387
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
KG V++Y++++ Y K RI AM L +M + P+ Y++L +HG
Sbjct: 388 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL--IHG 439
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 10/229 (4%)
Query: 57 PSSTHMYKILCDS---LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
P + + IL +S L + G AF +L + + G D + + +LI ++
Sbjct: 93 PPNIYTLHILINSFCHLNRVGFAFSVLA---KILKLGHQPDTATFTTLIRGICVEGKIGE 149
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVI 171
A LF + +G D+ + L+ + G + ++ SM KN + N+ I
Sbjct: 150 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVF--AYNTI 207
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ K R A ++ +++++G P TY S+I+A C + + + EM
Sbjct: 208 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
VV+++++V K G++ +A +V KM +G EPNV Y +LMD H
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGH 316
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/291 (17%), Positives = 122/291 (41%), Gaps = 1/291 (0%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
KL P T + L + G+ E L F M +G D Y +LI +
Sbjct: 124 KLGHQPD-TATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNT 182
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A L +K ++ + ++ ++ V + + M ++ +
Sbjct: 183 SAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSL 242
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ + + +++ +P V++ ++++A C+ G ++A V +M Q+G
Sbjct: 243 IHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ VV Y++++ + + +A+++ M KGC PNV YN+L++ + + + + +
Sbjct: 303 EPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIH 362
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT ++ D VK ++ G + + ++ + K+ +I++
Sbjct: 363 YTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 413
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 98/205 (47%), Gaps = 4/205 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K R + + F +M + ++ D Y++LI + ++ A LF E
Sbjct: 398 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 457
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ +L + L+ + + + + ++++++ + L+ ++ + ++G +
Sbjct: 458 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 517
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--FDKCVVAYSS 240
AA ++ L S+G P TY+ +IN CR GL +A K+F EM + G + C+ Y++
Sbjct: 518 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCI--YNT 575
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKG 265
+ + + A++L+ +M +G
Sbjct: 576 ITRGFLRNNETSRAIQLLQEMVARG 600
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/323 (18%), Positives = 127/323 (39%), Gaps = 57/323 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M + GI D Y ++ A + + + VA L E K+ P + + D+
Sbjct: 224 FSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI--MPDVVS-FNTVVDA 280
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ E M ++G+ + Y +L+ ++E+ A ++F KG + +
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMK--------NAELNISDCISC-----------V 170
+ + L+ Y + ++K + M + + + D + C
Sbjct: 341 VISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNT 400
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++NG+ K + A+ ++ ++ Q IP VTY+++I+ C + A +F EM
Sbjct: 401 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 460
Query: 231 FDKCVVAYSSM---------------------------------VAMYG--KTGRIRDAM 255
+V Y + +A+ G + G + A
Sbjct: 461 QIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAAR 520
Query: 256 RLVAKMKPKGCEPNVWIYNSLMD 278
L + + KG +P+VW Y+ +++
Sbjct: 521 DLFSNLSSKGLQPDVWTYSIMIN 543
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 3/127 (2%)
Query: 29 MEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKE 88
++ + G+ E LF S+ L Y I+ + L + G E K FR+M E
Sbjct: 507 IDGMCRAGELEAARDLFSNLSSKGLQ---PDVWTYSIMINGLCRRGLLDEASKLFREMDE 563
Query: 89 KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
G + +Y ++ F E A +L +E +G D V M ++G+ +
Sbjct: 564 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQS 623
Query: 149 TLEVVES 155
+++ +
Sbjct: 624 LKQILRN 630
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 121/255 (47%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y + +LG++ + EI K +M G + Y LI S+ +K A +F +
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQ 419
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G D + L+ ++ + G ++ +++ + M+ A L+ VI+N K
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AA +++ +++ QGC P VT+ +I + + Y A K++ +MQ GF V YS
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
++ + G G + +A + A+M+ K P+ +Y L+D+ G+A N+ + ++ +
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG 599
Query: 301 MAREFDMCVKFYNEF 315
+ C + F
Sbjct: 600 LRPNVPTCNSLLSTF 614
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M+ AG+ D+ Y I+ K G LF CE TP+ + I+ +
Sbjct: 452 YQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLF--CEMVGQGCTPNLV-TFNIMI-A 507
Query: 70 LGKSGRAFEI-LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L R +E LK +RDM+ G D Y+ ++ ++ AE +F E + K +
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCVIVNGFSKRRAYWAAVK 186
D V+ LV ++ + G V+K + ++M A L N+ C S +++ F + A
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNS--LLSTFLRVHRMSEAYN 625
Query: 187 VYEQLISQGCIPGQVTYASIIN 208
+ + +++ G P TY +++
Sbjct: 626 LLQSMLALGLHPSLQTYTLLLS 647
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N ++ L Y M++AG D Y +ME G E+ +F E + + + P
Sbjct: 514 NYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK--NWVPDEP- 570
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D GK+G + ++++ M + G+ + SL+ +F + + A L +
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Query: 122 EEKGMLRDLEVFLKLV 137
G+ L+ + L+
Sbjct: 631 LALGLHPSLQTYTLLL 646
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 142/312 (45%), Gaps = 27/312 (8%)
Query: 11 EKMKSA-GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
E+M+ G ++ Y + +A ++GD + + E K +TP+ M I+
Sbjct: 228 ERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERME--KEGVTPNVITMNTIV-GG 284
Query: 70 LGKSGRAFEILKFFRDMKEKGILE---DPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L + GR L FFR+ K LE + Y++L+ +F V +A ELF E ++G
Sbjct: 285 LCRVGRVGAALDFFRE-KRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGY 343
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D ++ ++ + G + + SMK A + +++ GF +++ A +
Sbjct: 344 PPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQ 403
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++E++ G P TY ++++ C+ G +S +++ M G VV + ++V Y
Sbjct: 404 LFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYC 463
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
K G+ +A+++ M +PN IYN+L+D + +RE D
Sbjct: 464 KAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCK-------------------SREVD 504
Query: 307 MCVKFYNEFRMN 318
+ +K ++E R N
Sbjct: 505 VAIKLFDEMREN 516
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 122/291 (41%), Gaps = 30/291 (10%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGI-LEDPSVYASLICSFASIAEVKVAE 115
PS++ + K+L + + F RD G D S + SL+ + ++
Sbjct: 96 PSASLLSKLL----ARFSSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMT 151
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN-- 173
ELF E + D+ + L+ + G+V L+V++ M + ++ C VI+N
Sbjct: 152 ELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDV--CADIVILNTV 209
Query: 174 --GFSKRRAYWAAVKVYEQLISQ--GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
G K A+ ++ + Q GC P VTY + +A CR+G A ++ M+++
Sbjct: 210 VDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKE 269
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G V+ +++V + GR+ A+ + + W ++ G A
Sbjct: 270 GVTPNVITMNTIVGGLCRVGRVGAALDFFREKR------TTW-----LEARGNAVT---- 314
Query: 290 EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y+T++SA+ + ++ ++E G D M M+ ++ ++
Sbjct: 315 --YSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRL 363
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 7/181 (3%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL + R E + F +MK G+ D Y +L+ + +EL
Sbjct: 385 YNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMI 444
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G + F LV Y + G ++ L++ SM A + + I +++ K R
Sbjct: 445 DDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVD 504
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK--AEKVFIEMQQKGFDKCVVAYSS 240
A+K+++++ + +P VT NA + GL K EK F M Q ++C Y +
Sbjct: 505 VAIKLFDEM-RENNVPANVT---TYNALLK-GLQDKNMPEKAFELMDQMKEERCTPDYVT 559
Query: 241 M 241
M
Sbjct: 560 M 560
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Query: 4 QSKLH----YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS 59
+ +LH +E+MK AG+ D Y ++ K GD V L D S
Sbjct: 395 KKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMID---DGCQPS 451
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
+ L K+G+ E LK FR M E I + +Y +LI EV VA +LF
Sbjct: 452 VVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFD 511
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
E E + ++ + L+ ++ M EK E+++ MK
Sbjct: 512 EMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMK 549
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 130/310 (41%), Gaps = 38/310 (12%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ LH+++K+ + G +D Y ++ KIG++ L E R T MY
Sbjct: 97 KKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRS---TRPDVVMY 153
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE------------- 110
+ D L K E + +M +GI D Y +LIC F +
Sbjct: 154 STIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMIL 213
Query: 111 ----------------------VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
VK ++ L +KG+ D+ ++ L+ Y G V+K
Sbjct: 214 KNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQK 273
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
++ M +N +I+NG K + A+ + +++ + IP VTY+S+I+
Sbjct: 274 AKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLID 333
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
C++G + + EM +G +V Y+S++ K + A+ L KMK +G +P
Sbjct: 334 GLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQP 393
Query: 269 NVWIYNSLMD 278
N + Y +L+D
Sbjct: 394 NKYTYTALID 403
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 106/261 (40%), Gaps = 38/261 (14%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G+ D Y +M+ + +G+ +K +FL ++ + Y I+ + L K
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVN---PDVYSYNIIINGLCK 302
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R E + R+M K ++ D Y+SLI + + +L KE +G +L
Sbjct: 303 GKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVT 362
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ +G K + A+ ++ ++
Sbjct: 363 YNSLL-----------------------------------DGLCKNQNLDKAIALFMKMK 387
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P + TY ++I+ C+ G K + +F + KG+ V Y+ M++ K G
Sbjct: 388 ERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFD 447
Query: 253 DAMRLVAKMKPKGCEPNVWIY 273
+A+ + +KM+ GC PN +
Sbjct: 448 EALAMKSKMEDNGCIPNAVTF 468
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 124/269 (46%), Gaps = 5/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M + GI D Y ++ F G + L E + ++ + + Y L D+
Sbjct: 173 YSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNIN---PNIYTYNTLIDT 229
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ E M +KG+ D +Y+ L+ + + EV+ A+++F + G+ D
Sbjct: 230 LCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPD 289
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY 188
+ + ++ + V++ + ++ M + + I D ++ +++G K + +
Sbjct: 290 VYSYNIIINGLCKGKRVDEAMNLLREMLHKNM-IPDTVTYSSLIDGLCKLGRITTILDLT 348
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ +G VTY S+++ C+ KA +F++M+++G Y++++ K
Sbjct: 349 KEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 408
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR++ L + KG +VW Y ++
Sbjct: 409 GRLKKGQALFQHLLVKGYCIDVWTYTVMI 437
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P KIL SL K ++ + M+ KGI+ D + LI F + ++ +
Sbjct: 8 PPIIEFGKIL-GSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ + + G + + L+ +G V+K+L + + + +++NG
Sbjct: 67 VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A+K+ + + P V Y++II+ C+ L +A ++ EM +G V+
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y++++ + G++ +A L+ +M K PN++ YN+L+D
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLID 228
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 135/291 (46%), Gaps = 3/291 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +M AGI+ D Y +M+ + G ++ F E E R + + + Y L
Sbjct: 166 LDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS---ADVYTYNSL 222
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L ++G E+ F M ++G D + LI +V A+++ + KG
Sbjct: 223 IHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGK 282
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ G +E ++ ES+ + + ++ +++NG+ K + A +
Sbjct: 283 EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFR 342
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++E++ +G P VTY ++I A C+ G A+K+F+EMQ G + Y ++
Sbjct: 343 LFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLC 402
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
K G + +A+ L +K +PN+ +++ L+D RA L + K IS
Sbjct: 403 KNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEIS 453
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 3/267 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M G D Y +M +G E LF R + L S Y IL +
Sbjct: 275 ELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFS---YNILINGY 331
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + E + F +M+ KG+ Y +LI + V+ A++LF E + G L
Sbjct: 332 CKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKL 391
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + G +E+ +++ +S+K E + + ++++G + A K +++
Sbjct: 392 STYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDE 451
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P + Y +IN C G+ S+A K+ +M++KG + ++ ++ K
Sbjct: 452 ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENE 511
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM 277
I +A++L+ +M+ + P+ + + L+
Sbjct: 512 IHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 37/217 (17%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y ++ DSL K G E L F +M GIL D VY+SL+ +K A E FKE E
Sbjct: 149 YGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 208
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G+ D+ + L+ +G S R W
Sbjct: 209 GRGISADVYTYNSLI-----------------------------------HGLS-RAGLW 232
Query: 183 AAVKVYEQL-ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
V + L + +G P T+ +I+ C+ G +A+++ M KG + ++ Y+++
Sbjct: 233 KEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTL 292
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ G++ DA +L + +G + NV+ YN L++
Sbjct: 293 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 329
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV-TYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++NG K R A+K++E++ +G G V TY II++ C+ G+ ++A +F EM
Sbjct: 117 ILINGLCKARKTGLAIKLHEKM--KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIG 174
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
G VV YSS++ + GR+++A+ +M+ +G +V+ YNSL+ RA
Sbjct: 175 AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA 229
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 5/257 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ F+K G+ +K LF E + L P Y L D L K+ + + +
Sbjct: 203 YNTVIDGFFKEGEVDKAYFLFHEMMGQGL---PPDVVTYNSLIDGLCKAQAMDKAVAILQ 259
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M +KG++ D Y +I + S+ +++ A L K+ G+ D+ + L+ Y + G
Sbjct: 260 HMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIG 319
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ V +SM + I ++++G++ + A + + +I G +
Sbjct: 320 RCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFN 379
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+I AY + G KA F EM+Q G VV+YS+++ + KTGR+ DA+ +M +
Sbjct: 380 ILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSE 439
Query: 265 GCEPNVWIYNSLMDMHG 281
G PN+ + SL +HG
Sbjct: 440 GLSPNIISFTSL--IHG 454
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 129/290 (44%), Gaps = 9/290 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M G++ D+ Y ++ + +G E+ L + L Y +L
Sbjct: 259 QHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQ---PDVVTYSLLIQYY 315
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR E F M KG + ++Y L+ +A+ + +L G+ +
Sbjct: 316 CKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEH 375
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
F L+ Y + G V+K + M+ L D +S +++ K AV +
Sbjct: 376 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLR-PDVVSYSTVIHILCKTGRVEDAVYHFN 434
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q++S+G P +++ S+I+ C IG + K E++ EM +G + ++++ K G
Sbjct: 435 QMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEG 494
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRA-KNLRQLEKYTTV 295
R+ +A + G +P+V YN+L+D + G+ ++++QL++ ++
Sbjct: 495 RVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSI 544
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 127/277 (45%), Gaps = 3/277 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ ++++ +M S G+ + + ++ IG+ +KV L E +R + P + M
Sbjct: 427 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIH--PDAIFMN 484
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+ D+L K GR E FF + G+ D Y +LI + + ++ + +
Sbjct: 485 TIM-DNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVS 543
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D + L+ Y + G VE L + M ++ S ++++G + A
Sbjct: 544 IGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVA 603
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++Y +++ +G TY +++ C +A ++F +++ K F+ V +S ++
Sbjct: 604 ARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVIN 663
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
K GRI +A L + M +G P+V Y+ ++ H
Sbjct: 664 ALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSH 700
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 128/277 (46%), Gaps = 5/277 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+KM +G+ D Y +++ + KIG + ++F + RK P+ST +Y IL
Sbjct: 294 KKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVF-DSMVRK-GQKPNST-IYHILLHGY 350
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G ++ M GI + + LIC++A V A F E + G+ D+
Sbjct: 351 ATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDV 410
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ + + G VE + M + L+ + +++G + ++ +
Sbjct: 411 VSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFE 470
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I++G P + +I++ C+ G +A+ F + G VV+Y++++ Y G+
Sbjct: 471 MINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGK 530
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+ ++++ + +M G P+ W YNSL++ G KN R
Sbjct: 531 MDESIKQLDRMVSIGLRPDSWTYNSLLN--GYFKNGR 565
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 122/306 (39%), Gaps = 18/306 (5%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D P + IL + K G + + F +M++ G+ D Y+++I V+
Sbjct: 369 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVED 428
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A F + +G+ ++ F L+ G +K E+ M N ++ I++
Sbjct: 429 AVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMD 488
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
K A ++ +I G P V+Y ++I+ YC +G ++ K M G
Sbjct: 489 NLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRP 548
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE-----PNVWIYNSL------------ 276
Y+S++ Y K GR+ DA+ L +M K + N+ ++
Sbjct: 549 DSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELY 608
Query: 277 MDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
M M R LR +E Y TV+ D ++ + + R +D I++ K
Sbjct: 609 MKMVDRGTQLR-IETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLK 667
Query: 337 LSQIEE 342
+ +I+E
Sbjct: 668 VGRIDE 673
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
Query: 53 LDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVK 112
+ L P S Y L + K+GR + L +R+M K + ++ +
Sbjct: 544 IGLRPDSW-TYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIV 602
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
A EL+ + ++G +E + ++ E V++ L + E +++ E + +++
Sbjct: 603 AARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVI 662
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
N K A ++ ++ +G +P +TY+ +I ++ GL +++ +F+ M++ G
Sbjct: 663 NALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNG 720
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQG---CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
++ G + A+++ + + G C P V+Y ++I+ + + G KA +F EM
Sbjct: 168 LIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMM 227
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+G VV Y+S++ K + A+ ++ M KG P+ YN
Sbjct: 228 GQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYN 274
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC---VVAYSSMVA 243
V+ ++ G P +Y ++I C +A ++ I M G C VV+Y++++
Sbjct: 149 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVID 208
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ K G + A L +M +G P+V YNSL+D
Sbjct: 209 GFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLID 243
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 161/332 (48%), Gaps = 31/332 (9%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD---------SL 70
LDS +++ K G ++ +F +L PS H LCD
Sbjct: 233 LDSSAMAALLKELAKQGYLKRAVEIF----DWLRNLEPS--HELSSLCDLYTYTTMISQC 286
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G + L+ +M+ +GI + Y++L+ E+ +A++++K+ E+G +L
Sbjct: 287 GSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNL 346
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +Y++ E+ ++V+++++ + +++ +K A+KVYE+
Sbjct: 347 VTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEK 406
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+++ G P TY ++I+AY + G KA ++F +M ++G ++ V+ YSS+++ K GR
Sbjct: 407 MLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGR 466
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDM--HG----RAKNL-RQLE---------KYTT 294
A+ L +KM + C+PNV +NSL+ HG +A L Q++ Y
Sbjct: 467 WEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCG 526
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
+I+AY ++ +K + + + G D A+
Sbjct: 527 LITAYERGGQWRRALKAFEQMQTQGCHPDAAV 558
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
PS+T Y L + GK G+ + L+ FRDM +G + Y+SLI + ++A E
Sbjct: 414 PSAT-TYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALE 472
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF + ++ ++ F L+ G EK E+ E M+ C ++ +
Sbjct: 473 LFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYE 532
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY---SKAEKVFIEMQQKGF-- 231
+ + A+K +EQ+ +QGC P + S++ + G+ SKA +++ + G
Sbjct: 533 RGGQWRRALKAFEQMQTQGCHPDAAVFNSLMEVLWQSGVLLAQSKALQLWTLANRSGHFR 592
Query: 232 -------DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
D V+ YS++ G + +R V+++K K
Sbjct: 593 IYTNSKQDSNVLQYSTVAFTSGAA--VVTVVRWVSELKNK 630
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY ++I+ +A ++ EM+ +G D V YS+++ + K + A + +M
Sbjct: 278 TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 337
Query: 262 KPKGCEPNVWIYNSLMDMHGR-------AKNLRQLEK---------YTTVISAYNMAREF 305
+GC PN+ YN L+D++ + K L LEK Y TVISA N + +
Sbjct: 338 LEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQP 397
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +K Y + G ++ + K Q+E+
Sbjct: 398 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEK 434
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 131/285 (45%), Gaps = 6/285 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M + G D Y ++ K GD++ L + E KL+ +Y + D L
Sbjct: 824 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE---PGVLIYNTIIDGL 880
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + L F++M+ KGI + Y+SLI + A L + E+ + D+
Sbjct: 881 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 940
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +++EG + + ++ + M ++ S ++NGF A +++E
Sbjct: 941 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 1000
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++S+ C P VTY ++I +C+ + +VF EM Q+G V Y+ ++ + G
Sbjct: 1001 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 1060
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
A + +M G PN+ YN+L+D G KN +LEK V
Sbjct: 1061 CDMAQEIFKEMVSDGVPPNIMTYNTLLD--GLCKN-GKLEKAMVV 1102
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 116/251 (46%), Gaps = 18/251 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + DSL K+ R + FF++++ KGI + Y +L+ + + A L +
Sbjct: 296 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 355
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+K + ++ + L+ +++ G V + E+ E M ++ ++NG
Sbjct: 356 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 415
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++ ++S+GC+ V+Y ++IN +C+ K+F EM Q+G V Y++++
Sbjct: 416 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 475
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-----------------DMHGRAKN 285
+ + G + A ++M G P++W YN L+ DM R +
Sbjct: 476 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 535
Query: 286 LRQLEKYTTVI 296
L + YTTVI
Sbjct: 536 L-DIVTYTTVI 545
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 128/273 (46%), Gaps = 7/273 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ +++M++ GI + Y ++ G + L + RK++ + L
Sbjct: 890 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN---PDVFTFSAL 946
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
D+ K G+ E K + +M ++ I DPS+ Y+SLI F + A+++F+ K
Sbjct: 947 IDAFVKEGKLVEAEKLYDEMVKRSI--DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 1004
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D+ + L+ + + VE+ +EV M L + +++ G + A
Sbjct: 1005 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 1064
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++++++S G P +TY ++++ C+ G KA VF +Q+ + + Y+ M+
Sbjct: 1065 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 1124
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++ D L + KG +P+V YN+++
Sbjct: 1125 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 1157
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 1/223 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TP+ Y L D+ K+G+ E + F +M I D Y+SLI + A
Sbjct: 359 ITPNVI-TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 417
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
++F KG L D+ + L+ + + VE +++ M L + ++ G
Sbjct: 418 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 477
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F + A + + Q+ G P TY ++ C G KA +F +MQ++ D
Sbjct: 478 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 537
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+V Y++++ KTG++ +A L + KG +P++ Y ++M
Sbjct: 538 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 580
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K+ R + +K FR+M ++G++ + Y +LI F +V A+E F + +
Sbjct: 436 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 495
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ + L+ + G +EK L + E M+ E+++ ++ G K
Sbjct: 496 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 555
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ L +G P VTY ++++ C GL + E ++ +M+Q+G K S
Sbjct: 556 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD-- 613
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
G I + L+ KM G P++
Sbjct: 614 ------GDITLSAELIKKMLSCGYAPSL 635
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 131/285 (45%), Gaps = 6/285 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M++ GI + Y ++ F + S+ AL + + KL P+ + +L +
Sbjct: 719 EQMQNLGIPHNHYTYSILINCFCR--RSQLPLALAVLGKMMKLGYEPNIVTLSSLL-NGY 775
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
S R E + M G + + +LI + A L KG DL
Sbjct: 776 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 835
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V + G + ++ M+ +L I I++G K + A+ ++++
Sbjct: 836 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 895
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ ++G P VTY+S+I+ C G +S A ++ +M ++ + V +S+++ + K G+
Sbjct: 896 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 955
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEKY 292
+ +A +L +M + +P++ Y+SL++ MH R +Q+ ++
Sbjct: 956 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 1000
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 118/293 (40%), Gaps = 51/293 (17%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + + R + + M E G D Y ++I S V A + FKE E KG
Sbjct: 264 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 323
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ ++ + LV NG + A
Sbjct: 324 IRPNVVTYTALV-----------------------------------NGLCNSSRWSDAA 348
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++ +I + P +TY+++++A+ + G +A+++F EM + D +V YSS++
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK------- 291
RI +A ++ M KGC +V YN+L++ +AK + R++ +
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y T+I + A + D +F+++ G D I++G ++E+
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 521
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 95/203 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L K R E ++ FR+M ++G++ + Y LI + +A+E+FKE
Sbjct: 1013 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 1072
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ ++ + L+ + G +EK + V E ++ +++ + +++ G K
Sbjct: 1073 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 1132
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ L +G P V Y ++I+ +CR G +A+ +F EM++ G Y++++
Sbjct: 1133 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 1192
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ G + L+ +M+ G
Sbjct: 1193 RARLRDGDREASAELIKEMRSCG 1215
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N F A+ + +++ G P +VT S++N +CR S A + +M +
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G+ +VAY++++ KT R+ DA +++ KG PNV Y +L++
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 336
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/337 (17%), Positives = 135/337 (40%), Gaps = 55/337 (16%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + + +M G+V ++ Y +++ F++ GD +K F + + ++P Y
Sbjct: 450 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF--FGISPD-IWTY 506
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL L +G + L F DM+++ + D Y ++I +V+ A LF
Sbjct: 507 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 566
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC----------------- 166
KG+ D+ + ++ +G++ + + MK L +DC
Sbjct: 567 KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKM 626
Query: 167 ISC-------------------VIVNGFSKRRAYW----------------AAVKVYEQL 191
+SC ++ FS + +Y AV ++ ++
Sbjct: 627 LSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEM 686
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ P + ++ +++A ++ + + +MQ G YS ++ + + ++
Sbjct: 687 VKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQL 746
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
A+ ++ KM G EPN+ +SL++ + +K + +
Sbjct: 747 PLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 783
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 129/324 (39%), Gaps = 59/324 (18%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTH 61
+ L +E M+ + LD Y ++ K G E+ +LF L + K D+ +T
Sbjct: 520 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 579
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILE--------DPSVYASLI-----CSFAS- 107
M L G E+ + MK++G+++ D ++ A LI C +A
Sbjct: 580 M-----SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPS 634
Query: 108 ------------------------------------IAEVKV--AEELFKEAEEKGMLRD 129
++E+K+ A LF E +
Sbjct: 635 LLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPS 694
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F KL+ + + + + E M+N + + +++N F +R A+ V
Sbjct: 695 IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 754
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ G P VT +S++N YC S+A + +M G+ V +++++
Sbjct: 755 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 814
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIY 273
+ +AM L+ +M KGC+P++ Y
Sbjct: 815 KASEAMALIDRMVAKGCQPDLVTY 838
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S G+ + Y +++ K G EK +F + K++ T + Y I+ +
Sbjct: 1068 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT---IYTYNIMIEG 1124
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K+G+ + F ++ KG+ D Y ++I F + A+ LFKE +E G L +
Sbjct: 1125 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 1184
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+ L+ + +G E + E+++ M++
Sbjct: 1185 SGCYNTLIRARLRDGDREASAELIKEMRS 1213
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
T+ +IN +C S A + +M + G++ V S+V + + R+ DA+ LV KM
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284
Query: 262 KPKGCEPNVWIYNSLMD 278
G +P++ YN+++D
Sbjct: 285 VEIGYKPDIVAYNAIID 301
>gi|224137224|ref|XP_002322504.1| predicted protein [Populus trichocarpa]
gi|222867134|gb|EEF04265.1| predicted protein [Populus trichocarpa]
Length = 647
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 145/338 (42%), Gaps = 26/338 (7%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKL---DLTPSSTHMYKILCDSLGKSGRAFEILK 81
Y M+ K D KV LF E R + ++T S+ LC+ K+ ++
Sbjct: 126 YNVTMKVLRKCRDLNKVEKLFDEMIERAVKPDNVTFSTIISCARLCNLADKA------VE 179
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
+F M G+ D ++++I S+ + V+ A L+ A + D F L+ +Y
Sbjct: 180 WFEKMPSFGLDPDDVTFSTMIDSYGRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRIYK 239
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ G + L V E MK + + I +++ + R W A K Y+ +I G P
Sbjct: 240 DSGNFDCCLNVYEEMKALGVKPNLVIYNTLLDAMGRARRPWQAKKFYQDIIDSGLSPSYA 299
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TYA+++ AY R K++ EM++K V+ Y++++AM G + +A+ + M
Sbjct: 300 TYAALLRAYGRARYGEDTIKIYKEMKEKELSLNVLLYNTILAMCADLGFVDEAIEIFEDM 359
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREF 305
K G P+ W ++S++ M + + E T++I Y A+
Sbjct: 360 KNSGISPDSWTFSSMITMSSCCGKVSEAENMLNEMFEAGFQPNIFVLTSLIQCYGKAQRI 419
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
D VK +N D G ++ V ++ EEL
Sbjct: 420 DDVVKTFNRLYELLITPDDRFCGCLLNVMTQTPN-EEL 456
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 125/287 (43%), Gaps = 67/287 (23%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTH--- 61
+ ++EKM S G+ D + +++++ ++G+ EK +L+ E +LD T ST
Sbjct: 178 VEWFEKMPSFGLDPDDVTFSTMIDSYGRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRI 237
Query: 62 ---------------------------MYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
+Y L D++G++ R ++ KF++D+ + G+
Sbjct: 238 YKDSGNFDCCLNVYEEMKALGVKPNLVIYNTLLDAMGRARRPWQAKKFYQDIIDSGLSPS 297
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
+ YA+L+ ++ + +++KE +EK + ++ ++ ++ M + G V++ +E+ E
Sbjct: 298 YATYAALLRAYGRARYGEDTIKIYKEMKEKELSLNVLLYNTILAMCADLGFVDEAIEIFE 357
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MKN+ G P T++S+I G
Sbjct: 358 DMKNS-----------------------------------GISPDSWTFSSMITMSSCCG 382
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
S+AE + EM + GF + +S++ YGK RI D ++ ++
Sbjct: 383 KVSEAENMLNEMFEAGFQPNIFVLTSLIQCYGKAQRIDDVVKTFNRL 429
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 152/336 (45%), Gaps = 19/336 (5%)
Query: 23 GCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKF 82
G + + A ++G E+ + FL+ ++ P S + L L K GR KF
Sbjct: 186 GVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNA---LLHRLSKVGRGDLSRKF 242
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F+DM GI Y +I ++++A LF + +E G D+ + L+ + +
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G++++ + + E MK+A+ + ++N F K A + ++ + G P VT
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y++ I+A+C+ G+ +A K F++M++ Y+S++ K G + +A++LV ++
Sbjct: 363 YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEIL 422
Query: 263 PKGCEPNVWIYNSLMD---MHGRAKNLRQL-------------EKYTTVISAYNMAREFD 306
G + NV Y +L+D GR K ++ E YT ++ + A+E +
Sbjct: 423 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 482
Query: 307 MCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
E + D + G ++ S++EE
Sbjct: 483 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEE 518
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 155/355 (43%), Gaps = 19/355 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + ++ M+ + + Y +++A K G+ + L E + L + Y
Sbjct: 377 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVT---Y 433
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D L + GR E + FR M G+ + Y +L+ F E++ A+++ KE +E
Sbjct: 434 TALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 493
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
K + DL ++ ++ E +E+ ++ +K + +N + I +++ + K
Sbjct: 494 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE 553
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ + E+++ G I +VTY ++I+ C+ GL +A F M + G V Y+++V
Sbjct: 554 ALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVD 613
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGR---AKNLR---------- 287
K A +L +M KG P+ Y +L+D HG A NLR
Sbjct: 614 GLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL 673
Query: 288 QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
L YT +I + + + +E G + D + ++ + L +++E
Sbjct: 674 DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDE 728
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+++ M +AGI Y +++ K GD E +LF + ++ TP Y L D
Sbjct: 242 FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLF--TQMKEAGFTPDIV-TYNSLID 298
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
GK G E + F MK+ D Y +LI F + A E E + G+
Sbjct: 299 GHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKP 358
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + + + +EGM+++ ++ M+ L ++ +++ K A+K+
Sbjct: 359 NVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLV 418
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E+++ G VTY ++++ C G +AE+VF M G Y+++V + K
Sbjct: 419 EEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKA 478
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ A ++ +MK K +P++ +Y +++
Sbjct: 479 KEMEYAKDILKEMKEKCIKPDLLLYGTIL 507
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 5/220 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM-YKILCDSL 70
++K +GI ++ Y +M+A++K G + + L E LDL +T + Y L D L
Sbjct: 525 EIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE----MLDLGLIATEVTYCALIDGL 580
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
KSG E + F M E G+ + +VY +L+ +VA++LF E +KGM+ D
Sbjct: 581 CKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDK 640
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ ++ G +++ L + + M + + ++ G S A + ++
Sbjct: 641 IAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDE 700
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+I +G +P +V Y +I Y +G +A ++ EM ++G
Sbjct: 701 MIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 123/274 (44%), Gaps = 3/274 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MK AG D Y +++ K+G ++ +F + + D Y L +
Sbjct: 278 FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD---PDVITYNALINC 334
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K R + +F +MK G+ + Y++ I +F ++ A + F + + +
Sbjct: 335 FCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 394
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G + + L++VE + A + ++ +++G + A +V+
Sbjct: 395 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 454
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ G P Q TY ++++ + + A+ + EM++K ++ Y +++
Sbjct: 455 AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNES 514
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
R+ +A L+ ++K G N IY +LMD + ++
Sbjct: 515 RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKS 548
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 124/272 (45%), Gaps = 9/272 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MK A D Y ++ F K E++ F K + + Y D+
Sbjct: 313 FEQMKDADCDPDVITYNALINCFCKF---ERMPKAFEFLHEMKANGLKPNVVTYSTFIDA 369
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLI---CSFASIAEVKVAEELFKEAEEKGM 126
K G E +KFF DM+ + + Y SLI C ++AE A +L +E + G+
Sbjct: 370 FCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAE---ALKLVEEILQAGI 426
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L+ EEG +++ EV +M NA + + +V+GF K + A
Sbjct: 427 KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKD 486
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ +++ + P + Y +I+ C +A+ + E+++ G + V Y++++ Y
Sbjct: 487 ILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYF 546
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+G+ +A+ L+ +M G Y +L+D
Sbjct: 547 KSGQATEALTLLEEMLDLGLIATEVTYCALID 578
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS-STHMYKILCD 68
+++M G++ D Y +++ K G+ ++ L R +++ H Y L
Sbjct: 628 FDEMLDKGMMPDKIAYTALIDGNMKHGNLQEA----LNLRDRMIEIGMELDLHAYTALIW 683
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L SG+ + +M KG+L D VY LI + ++ +V A EL E ++GM+
Sbjct: 684 GLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMIT 743
Query: 129 DL 130
L
Sbjct: 744 GL 745
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 8/292 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH+++K+ + + Y ++ K G++ L E R T + MY +
Sbjct: 100 LHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRS---TRPNVVMYSAI 156
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K E + +M + I + Y +LIC+F ++ A L E K +
Sbjct: 157 IDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNI 216
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ F L+ +EG K ++ +M +N + +++NG K + A+
Sbjct: 217 NPDVYTFSILIDALCKEGKNAK--QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMN 274
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ +++ + +P VTY S+I+ C+ G + A + EM +G VV Y+S++
Sbjct: 275 LLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALC 334
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEKYTTV 295
K + A L KMK +G +P ++ Y +L+D GR KN ++L ++ V
Sbjct: 335 KNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLV 386
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 7/222 (3%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYAS--LICSFASIAEV 111
++ P + + IL D+L K G+ + + F M + G+ +P+VY+ +I V
Sbjct: 215 NINPD-VYTFSILIDALCKEGKNAK--QIFHAMVQMGV--NPNVYSYNIMINGLCKCKRV 269
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A L +E K M+ D + L+ + G + L ++ M + +
Sbjct: 270 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 329
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ K + A ++ ++ +G P TY ++I+ C+ G A+++F + KG
Sbjct: 330 LDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGC 389
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
V Y+ M++ K G +A+ + +KM+ GC PN +
Sbjct: 390 CIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 431
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 85/203 (41%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ + L K R E + R+M K ++ D Y SLI + A L E
Sbjct: 256 YNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMH 315
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G D+ + L+ + ++K + MK + + +++G K
Sbjct: 316 HRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLK 375
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++ L+ +GC TY +I+ C+ G++ +A + +M+ G V + ++
Sbjct: 376 NAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIII 435
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ A +L+ +M KG
Sbjct: 436 RSLFEKDENDKAEKLLHEMIAKG 458
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 99/222 (44%), Gaps = 1/222 (0%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
SL K ++ + M KGI ++ + LI F + ++ + L + + G
Sbjct: 19 SLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXP 78
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ +G V+K L + + + ++NG K A+K+
Sbjct: 79 NTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLL 138
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ + P V Y++II+ C+ L ++A ++ EM + V+ Y++++ +
Sbjct: 139 RMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLA 198
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-MHGRAKNLRQL 289
G++ A L+ +M K P+V+ ++ L+D + KN +Q+
Sbjct: 199 GQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQI 240
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 85/205 (41%), Gaps = 44/205 (21%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
I+ K + Y + + +Q+ +G VT + +IN +C +G + + + ++ + G
Sbjct: 16 ILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLG 75
Query: 231 F---------------------------DKCV--------VAYSSMVAMYGKTGRIRDAM 255
+ DK V V+Y +++ KTG R A+
Sbjct: 76 YXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAI 135
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEF 315
+L+ ++ + PNV +Y++++D L K V AY++ E D F N
Sbjct: 136 KLLRMIEDRSTRPNVVMYSAIID---------GLCKDKLVNEAYDLYSEMDAREIFPNVI 186
Query: 316 RMNGGVIDRAMAGIMVGVFSKLSQI 340
N + +AG ++G FS L ++
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEM 211
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 136/274 (49%), Gaps = 4/274 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDS-EKVAALFLECESRKLDLTPSSTHMYKILCD 68
+E M+ G ++ Y +++ + K GDS +++ +LF E + L+++P + Y +
Sbjct: 97 FETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQE--MKDLEISPDD-YTYNTMIT 153
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ ++ E L+ F++MKE G + Y +L+ + K A EL E E G+
Sbjct: 154 ACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISP 213
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + +L+ Y G+ ++ + +S+ + L + C +++ F++ Y A++ +
Sbjct: 214 NIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETF 273
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ C P VTY +I+ Y R+ KVF MQ+K +V ++S++ +G
Sbjct: 274 TEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNC 333
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
G + + + +MK G P V +N L++ +GR
Sbjct: 334 GMLTEVSNVFREMKRAGYMPGVDTFNILIECYGR 367
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 152/380 (40%), Gaps = 55/380 (14%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
S G+ D YC ++ AF + EK F E RK + TP+ Y IL D G+
Sbjct: 243 SKGLCPDEFTYCTLISAFNRAERYEKALETF--TEMRKTNCTPNIV-TYNILIDIYGRME 299
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE----------- 123
+ +++K F+ M+EK D + SL+ SF + + +F+E +
Sbjct: 300 KLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFN 359
Query: 124 -------------------KGMLRD-----LEVFLKLVLMYIEEGMVEKTLEVVESMKNA 159
KG+LR + F L+ EG ++ +V + M A
Sbjct: 360 ILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEA 419
Query: 160 ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP-GQVTYASIINAYCRIGLYSK 218
L +SD +++ ++ ++ K ++L P + + + AYC+ + ++
Sbjct: 420 GLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNE 479
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A+ ++ G + +++M++M K G I A++L+ +++ +P+ YN LM
Sbjct: 480 AQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMS 539
Query: 279 MHG----------------RAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVI 322
M+G RA L Y T++ +Y D + + +
Sbjct: 540 MYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRP 599
Query: 323 DRAMAGIMVGVFSKLSQIEE 342
D +VG +S L +E
Sbjct: 600 DNFTFNTLVGSYSSLGLYKE 619
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 124/276 (44%), Gaps = 21/276 (7%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILE-DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
LG + L+ F +K+ D Y SLI + LF+ + +G
Sbjct: 48 LGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRG 107
Query: 129 DLEVFLKLVLMYIEEG-MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + ++ +Y + G ++ + + MK+ E++ D ++ + A+++
Sbjct: 108 NAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRL 167
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++++ GC P +VTY ++++ Y + G++ +A ++ +EM+ G +V Y+ ++A Y +
Sbjct: 168 FQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYAR 227
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDM 307
G +A L + KG P+ + Y T+ISA+N A ++
Sbjct: 228 AGLCDEAAALKKSLLSKGLCPDEFTY-------------------CTLISAFNRAERYEK 268
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
++ + E R + I++ ++ ++ +++++
Sbjct: 269 ALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDM 304
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEK------GILEDPSVYASLICSFASIAEVKVAEELFK 119
L S SG+ F++ K+ ++++ GIL V A C + A++ + +L+
Sbjct: 431 LIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLAL-NQLY- 488
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
+ G D++VF ++ M + G +E+ ++++E ++ A+L +++ + +
Sbjct: 489 ---DNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREG 545
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
Y A +V ++ G P +TY +++ +Y + G A +VF +M ++
Sbjct: 546 MYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFN 605
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++V Y G ++A+ ++ M GC+P + +L+D
Sbjct: 606 TLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLD 644
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 3/145 (2%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+C G RA ++L+ R + K D Y L+ + AEE+ E G
Sbjct: 505 MCAKRGWIERAVKLLEEIRKAQLK---PDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAG 561
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+L + L+ Y + G ++ V M A + + +V +S Y A+
Sbjct: 562 KAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEAL 621
Query: 186 KVYEQLISQGCIPGQVTYASIINAY 210
V E + GC P Q+T+ ++++ Y
Sbjct: 622 SVIEYMTEHGCQPTQITFKALLDGY 646
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 133/284 (46%), Gaps = 19/284 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G V D+ Y +++ + +K LF E +K+ + P + Y IL DS
Sbjct: 441 KEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQE--MKKVGVNPD-VYTYTILIDSF 497
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+G + +F +M+ G + Y +L+ ++ ++ A ++F +
Sbjct: 498 CKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNA 557
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI----------SDCISC------VIVNG 174
+ L+ + G ++K EV + NI +D IS +VNG
Sbjct: 558 ITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNG 617
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K + A + + +++ GC P Q+ Y ++++ +C++G A++VF+ M + G+
Sbjct: 618 LCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPS 677
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y+S++ K GR+ AM+++++M C PNV Y +++D
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVD 721
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 117/237 (49%), Gaps = 20/237 (8%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++ + + LC +GK +AF+I+K +M KG + D S Y +I V A L
Sbjct: 419 NTANFARCLC-GVGKFEKAFQIVK---EMMRKGFVPDASTYTKVITFLCQAKRVDKAFLL 474
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F+E ++ G+ D+ + L+ + + G++E+ + M++A + + +++ + K
Sbjct: 475 FQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLK 534
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM----------- 226
+ + A ++ +++ C P +TY+++I+ C+ G KA +V+ ++
Sbjct: 535 SKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDF 594
Query: 227 --QQKGFDKC---VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ K D VV Y ++V K ++ DA L+ M GCEPN +Y++L+D
Sbjct: 595 YFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVD 651
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 36/244 (14%)
Query: 35 IGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
IG S+ + + F E + D + Y L + L K+ + + M G +
Sbjct: 584 IGTSDNIESDFY-FEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPN 642
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
VY +L+ F + E+ A+E+F + G L + + L+ ++G ++
Sbjct: 643 QIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLD------- 695
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
A+KV Q++ C P VTY ++++ C+ G
Sbjct: 696 ----------------------------LAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTG 727
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
KA + M++KG VV Y++++ GK G++ + L +MK KGC PN Y
Sbjct: 728 ETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYR 787
Query: 275 SLMD 278
L++
Sbjct: 788 ILIN 791
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV-------- 137
M +G PS++ SL+ ++ + + A +LF G V+ +
Sbjct: 332 MMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREE 391
Query: 138 -----LMYIEEGMVEKTLEVVESMKNAELNISDCISCVI-VNGFSKRRAYWAAVKVYEQL 191
L+ + E + E+ L V S ++N ++ C+ V F K A ++ +++
Sbjct: 392 LPNPELLDLAEKVYEEML--VASCVLNKINTANFARCLCGVGKFEK------AFQIVKEM 443
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ +G +P TY +I C+ KA +F EM++ G + V Y+ ++ + K G I
Sbjct: 444 MRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLI 503
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
A +M+ GC PNV Y +L+ + ++K L Q
Sbjct: 504 EQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQ 540
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A KVYE+++ C+ ++ A+ C +G + KA ++ EM +KGF Y+ ++
Sbjct: 401 AEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVIT 460
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+ R+ A L +MK G P+V+ Y L+D +A + Q + +
Sbjct: 461 FLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSW 509
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 109/236 (46%), Gaps = 8/236 (3%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ K G++EK AL L K +P+ Y L D LGK+G+ L+ F
Sbjct: 716 YTAMVDGLCKTGETEK--ALNLLSLMEKKGCSPNVV-TYTALIDGLGKAGKVDAGLELFM 772
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
MK KG + Y LI + + A L E ++ + L+ + V + +
Sbjct: 773 QMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRF 832
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI---SQGCIPGQV 201
+ +L ++E M++ + + ++++ FSK A++++++++ S + +
Sbjct: 833 LA--SLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKD 890
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
+ S+I A C +A ++ EM+++G + A+ +V + + +A++L
Sbjct: 891 MHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 3/257 (1%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D Y +++ F+K GD K LF E R + P Y + +L K+ +
Sbjct: 220 DVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI---PPDLVTYSSVVHALCKARAMDKAE 276
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
F R M KG+L D Y +LI ++S + K A +FKE + +L D+ L+
Sbjct: 277 AFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSL 336
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G +++ +V ++M N +++NG++ + +++ ++ G P
Sbjct: 337 CKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVI 396
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
T+ +I AY G+ KA +F EM+ G VV Y +++A + G++ DAM +
Sbjct: 397 CTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQ 456
Query: 261 MKPKGCEPNVWIYNSLM 277
M +G P+ + Y+ L+
Sbjct: 457 MIDQGVVPDKYAYHCLI 473
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 16/296 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ +L + G + + F +M++ G+ Y ++I + I ++ A E F +
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G++ D + L+ + G + K E++ + N + + I+N K
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +++ ++ G P V Y +++ YC +G KA +VF M G + VV Y ++V
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD--------------MHGRAKNLRQ 288
Y K GRI + + L +M KG +P+ +YN ++D H ++
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638
Query: 289 LEK--YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ K Y+ V+ R FD + + E R ID M+ + ++EE
Sbjct: 639 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 694
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 148/339 (43%), Gaps = 26/339 (7%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ ++ G+ +D+ +++ F + +++ + L + +L P Y IL
Sbjct: 133 LAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLH-RTPELGCVPD-VFSYNIL 190
Query: 67 CDSL---GKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEA 121
SL GKSG+A ++L+ M E G + P V Y ++I F +V A +LFKE
Sbjct: 191 LKSLCNQGKSGQADDLLRM---MAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEM 247
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++G+ DL + +V + ++K + M N + + ++ G+S +
Sbjct: 248 VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQW 307
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AV+V++++ Q +P V +++ + C+ G +A VF M KG + V +Y+ M
Sbjct: 308 KEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIM 367
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL--------------- 286
+ Y G + D L M G P + +N L+ + L
Sbjct: 368 LNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 427
Query: 287 -RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
+ Y TVI+A + D ++ +N+ G V D+
Sbjct: 428 KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDK 466
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 115/264 (43%), Gaps = 9/264 (3%)
Query: 17 GIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
G+ LD + I+ K+G D++ + L + + L P + +Y +L D
Sbjct: 496 GMRLDIVFFGSIINNLCKLGRVMDAQNIFDL-----TVNVGLHPDAV-VYNMLMDGYCLV 549
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+ + L+ F M GI + Y +L+ + I + LF+E +KG+ ++
Sbjct: 550 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 609
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ E G M + + ++ C +++ G K R + A+ ++++L +
Sbjct: 610 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 669
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+T ++I + +A+ +F + + G C V YS M+ K G + +
Sbjct: 670 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEE 729
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLM 277
A + + M+ GCEP+ + N ++
Sbjct: 730 AEDMFSSMQNAGCEPDSRLLNHVV 753
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 113/307 (36%), Gaps = 63/307 (20%)
Query: 43 ALFLECESRKLD---LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA 99
ALF SR L+P+S + Y IL D ++ R L FF + G+ D + +
Sbjct: 94 ALFNRAASRAQGPRVLSPTS-YTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIAS 152
Query: 100 SLICSFASIAEVKVAEE----LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
L+ F E K +E L E G + D+ + L+ +G + +++
Sbjct: 153 HLLKGFC---EAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRM 209
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
M C P V Y ++I+ + + G
Sbjct: 210 MAEG---------------------------------GTVCSPDVVAYNTVIDGFFKEGD 236
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+KA +F EM Q+G +V YSS+V K + A + +M KG P+ W YN+
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296
Query: 276 LMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
L I Y+ ++ V+ + E R + D ++G
Sbjct: 297 L-------------------IYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLC 337
Query: 336 KLSQIEE 342
K +I+E
Sbjct: 338 KYGKIKE 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 38/227 (16%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ M SAGI + Y ++ + KIG ++ +LF E + + ST +Y
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK---PSTILY 609
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+ D L ++GR F +M E GI + Y+ ++ A LFKE
Sbjct: 610 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE--- 666
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
LR + V + ++ ++ +I F RR A
Sbjct: 667 ---LRAMNVKIDII----------------------------TLNTMIAGMFQTRRVEEA 695
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ + G +P VTY+ +I + GL +AE +F MQ G
Sbjct: 696 K-DLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 741
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 130/273 (47%), Gaps = 7/273 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYK 64
L++++K+ + G LD Y ++ K G+++ VA L LE S K D+ MY
Sbjct: 183 LYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVV-----MYT 237
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ L K+ R + + +M KGI + Y +LI F + +K A L E + K
Sbjct: 238 TIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLK 297
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ D+ F L+ +EG +++ + + E MK+ + + +++G K A
Sbjct: 298 NINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERA 357
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ + +++ QG P +Y +++A C+ G A++ F + KG+ V Y+ M+
Sbjct: 358 IALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMING 417
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G D M L +KM+ KGC P+ + +++
Sbjct: 418 LCKAGLFGDVMDLKSKMEGKGCMPDAITFKTII 450
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 107/270 (39%), Gaps = 38/270 (14%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P T + + SL K+ ++ F+ + G+ + LI F +A + A
Sbjct: 90 PPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFS 149
Query: 117 LFKEAEEKGMLRDLEVFLKLV-----------LMYIEEGMVEKTLEV------------- 152
+F ++G D L+ +Y + +V + ++
Sbjct: 150 VFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLC 209
Query: 153 -----------VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ ++ + + I++ K + A +Y ++I +G P
Sbjct: 210 KAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVF 269
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY ++I +C +G +A + EM+ K + V ++ ++ GK G+I +A+ L +M
Sbjct: 270 TYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEM 329
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
K K PN+ Y SL+D G KN LE+
Sbjct: 330 KHKNMFPNIVTYTSLID--GLCKN-HHLER 356
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + L K+G + + R ++ + D +Y ++I V A +L+ E
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI 260
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ ++ + L+ + G +++ ++ MK +N
Sbjct: 261 VKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNIN-------------------- 300
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
P T+ +I+A + G +A +F EM+ K +V Y+S++
Sbjct: 301 ---------------PDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLI 345
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQLEKYTTVISAY 299
K + A+ L KMK +G +P+V+ Y L+D GR +N +Q ++ V +
Sbjct: 346 DGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYH 405
Query: 300 NMAREFDMCVKFYNEFRMNGGVID 323
R +++ + + + G V+D
Sbjct: 406 LNVRTYNVMINGLCKAGLFGDVMD 429
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 76/195 (38%), Gaps = 20/195 (10%)
Query: 166 CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
C +++N F A V+ ++ +G P +T ++I C G +A +
Sbjct: 129 CTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDK 188
Query: 226 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+ +GF V+Y +++ K G + RL+ K++ +P+V +Y ++ +H KN
Sbjct: 189 VVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTI--IHCLCKN 246
Query: 286 LR------------------QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
R + Y T+I + + NE ++ D
Sbjct: 247 KRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTF 306
Query: 328 GIMVGVFSKLSQIEE 342
I++ K +I+E
Sbjct: 307 NILIDALGKEGKIDE 321
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
I++ K + Y + +++Q S G P T +IN +C + + A VF + ++G
Sbjct: 99 ILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRG 158
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------MHGRA 283
+ + ++++ G I+ A+ K+ +G + + Y +L++ A
Sbjct: 159 YHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVA 218
Query: 284 KNLRQLEK---------YTTVI 296
+ LR+LE YTT+I
Sbjct: 219 RLLRKLEGHSVKPDVVMYTTII 240
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+KMK GI D Y +++A K G E F + L + Y ++ + L
Sbjct: 362 KKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHL---NVRTYNVMINGL 418
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
K+G +++ M+ KG + D + ++IC+ E AE+ +E +G+L
Sbjct: 419 CKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 155/344 (45%), Gaps = 42/344 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M G+ L++ CY +++ + + D +V + E+ ++ T
Sbjct: 38 DDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGD----------- 86
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G G ++L + G+ + Y LI F I +++ AE L + + +G+ +
Sbjct: 87 GTCGGPPKVLD---ECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQ 143
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMK--NAELNIS--DCISCVIVNGFSKRRAYWAAVK 186
+F ++ Y +GMV+ L++ +M+ EL+I + ++C G + A
Sbjct: 144 IIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLAC----GLCRVNRLDEAKT 199
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ +I G +P VTY ++I+ +C+ G +A ++F EM +KG VV Y+ M+ Y
Sbjct: 200 LLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYA 259
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------LRQLEK--------- 291
K G IR+A R +M+ KG P+V+ Y SL +HG N L+ E+
Sbjct: 260 KKGSIREAERFRKEMEKKGFVPDVYTYASL--VHGHCVNGKVDVALKLFEEMKQRGTEPN 317
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
YT +IS + + Y++ G + D ++ +VG
Sbjct: 318 VVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVG 361
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T + I C K G E + FR+M EKG Y +I +A ++ AE K
Sbjct: 217 TTLISIHC----KDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRK 272
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E E+KG + D+ + LV + G V+ L++ E MK + +++G +K
Sbjct: 273 EMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEG 332
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINA 209
AA ++Y+ ++ G IP Y++++ +
Sbjct: 333 RSEAAFQLYDDMLKAGLIPDDSLYSALVGS 362
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ ++M+ G V D Y ++ G + LF E + R T + Y L
Sbjct: 270 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRG---TEPNVVAYTALIS 326
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFAS 107
L K GR+ + + DM + G++ D S+Y++L+ S +
Sbjct: 327 GLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHT 365
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 142/334 (42%), Gaps = 23/334 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILC 67
+EKM AG + Y ++ F+ G E +F E R K DLT +T+M
Sbjct: 481 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYM----- 535
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D + K+G + F D++ G L D Y+ LI + + +F +++G
Sbjct: 536 DCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 595
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D + +V + + G V K E++E MK + + IV+G +K A +
Sbjct: 596 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 655
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+E+ S+G V Y+S+I+ + ++G +A + EM +KG V ++S++ K
Sbjct: 656 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK 715
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----------------LRQLEK 291
I +A+ MK C PN + Y+ L++ R + + +
Sbjct: 716 AEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 775
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
YTT+IS + F+ NGG+ D A
Sbjct: 776 YTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 809
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 100/193 (51%)
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
S Y LI + A + A EL ++ +E G + +F LV EG V L +V+
Sbjct: 180 SAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDE 239
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
+K + L + V ++ F K A K + +L +QG P V+Y S+I C+ G
Sbjct: 240 VKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGR 299
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+AE++F +M+ + C AY++M+ YG GR DA +L+ +++ +GC P+V +NS
Sbjct: 300 LGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 359
Query: 276 LMDMHGRAKNLRQ 288
++ G+ + + +
Sbjct: 360 ILTCLGKKRKVDE 372
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 156/385 (40%), Gaps = 65/385 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ + + I++D C + +E YKI +S +C + Y L D
Sbjct: 420 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT------------YCSLIDG 467
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLI--------------------------- 102
LGK G+ E + F M + G +P VY SLI
Sbjct: 468 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 527
Query: 103 ---------CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
C F + EV+ +F++ G L D+ + L+ + G +T +
Sbjct: 528 LTLLNTYMDCVFKA-GEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIF 586
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+MK + +V+GF K A ++ E++ + P TY +I++ +I
Sbjct: 587 HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKI 646
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
+A +F E + KG + VV YSS++ +GK GRI +A ++ +M KG PNV+ +
Sbjct: 647 DRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 706
Query: 274 NSLMDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDMCVKFYNEFRM 317
NSL+D +A+ + + Y+ +I+ ++++ F+ + +
Sbjct: 707 NSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQK 766
Query: 318 NGGVIDRAMAGIMVGVFSKLSQIEE 342
G V + M+ +K+ I +
Sbjct: 767 QGLVPNVVTYTTMISGLAKVGNITD 791
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 129/279 (46%), Gaps = 3/279 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ MK G LD+ Y +++ F K G K + E + + + T ++ Y + D
Sbjct: 586 FHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT---YGAIVDG 642
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K R E F + K KGI + +Y+SLI F + + A + +E +KG+ +
Sbjct: 643 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 702
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ ++ + + L +SMK + + +++NG + + Y A ++
Sbjct: 703 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 762
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ QG +P VTY ++I+ ++G + A +F + G ++++++
Sbjct: 763 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN 822
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
R +A ++ + + +GC N+ SL+D +++ L Q
Sbjct: 823 RAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQ 861
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 126/270 (46%), Gaps = 4/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ ++K+ G+ D Y ++ K G + LF + E+ + + + Y +
Sbjct: 271 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER---SVPCAYAYNTMIM 327
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G +GR + K ++E+G + + S++ +V A LF E +K
Sbjct: 328 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 386
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + ++ M G VE+ +++ M++A L + ++V+ K R A K++
Sbjct: 387 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 446
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E +GC P VTY S+I+ + G +A ++F +M G + V Y+S++ +
Sbjct: 447 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 506
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR D ++ ++ +GC+P++ + N+ MD
Sbjct: 507 GRKEDGHKIFKELIRRGCKPDLTLLNTYMD 536
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 14/285 (4%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
+ L +M+ G + + ++ A + G AL E + L+ +
Sbjct: 195 PERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLE---PDIVL 251
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D GK+G KFF ++K +G+ D Y S+I + AEELF + E
Sbjct: 252 YNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 311
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSK 177
+ + + +++ Y G E +++E ++ CI V I+ K
Sbjct: 312 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRE-----RGCIPSVVSFNSILTCLGK 366
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+R A+ ++E ++ + P TY II+ C G +A ++ EM+ ++
Sbjct: 367 KRKVDEALSLFE-VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 425
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+ MV K ++ +A ++ +GC P+ Y SL+D G+
Sbjct: 426 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 470
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P Y +I A +A ++ +MQ+ G++ V ++++V + G++ DA+ L
Sbjct: 177 PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 236
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
V ++K EP++ +YN +D G+A N+ DM KF++E +
Sbjct: 237 VDEVKGSCLEPDIVLYNVCIDCFGKAGNV-------------------DMAWKFFHELKA 277
Query: 318 NGGVIDRAMAGIMVGVFSK---LSQIEEL 343
G D M+ V K L + EEL
Sbjct: 278 QGLKPDDVSYTSMIWVLCKAGRLGEAEEL 306
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V++ ++ R A+++ Q+ G G + +++ A R G + A + E++
Sbjct: 184 VLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGS 243
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+ +V Y+ + +GK G + A + ++K +G +P+ Y S++ + +A L +
Sbjct: 244 CLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEA 303
Query: 290 EK----------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
E+ Y T+I Y A F+ K R G
Sbjct: 304 EELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 349
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 148/355 (41%), Gaps = 19/355 (5%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L M G ++ YC ++ FYK ++ ++ A L E K + P K
Sbjct: 164 AALRLLNNMPGQGCEFNAVSYCAVISGFYK--ENCQIEAYHLFDEMLKQGICPDILTFNK 221
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
++ L K G E K F + ++G+ + + I + A L + +
Sbjct: 222 LI-HVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ D+ + L+ + + + + + M N+ + ++ I+NGF K A
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
K+ + +G IP + TY+S+IN C G ++A VF E +KGF ++ Y+++V
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG 400
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYN----------SLMDMHGRAKN------LRQ 288
K G + A++L+ M GC P++W YN L D +G + +
Sbjct: 401 LSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPD 460
Query: 289 LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ + T+I Y R D ++ + +G D ++ K +++ +
Sbjct: 461 IFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNV 515
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 3/241 (1%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G + D Y ++ GD + A+F E + S +Y L L K G
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF---KHSIILYNTLVKGLSKQGLV 407
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
+ L+ +DM E G D Y ++ + + A + +A KG + D+ F L
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTL 467
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ Y ++ ++K +E++++M + + ++NG K R V ++ ++ +GC
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P +TY +I ++C+ S+A ++F EM+ +G +V +++ G + A
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 257 L 257
L
Sbjct: 588 L 588
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 106/243 (43%), Gaps = 35/243 (14%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + K+G K RD KG + D Y+SLI + ++ A +F EA
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-------------------------- 156
EKG + ++ LV ++G+V + L++++ M
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443
Query: 157 -KNAELNISDCISCV--------IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
N LN + C+ +++G+ K+R A+++ + ++S G P +TY +++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N C+ F M +KG ++ Y+ ++ + K ++ +AM L +MK +G
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Query: 268 PNV 270
P++
Sbjct: 564 PDI 566
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 119/285 (41%), Gaps = 17/285 (5%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
LTP ++C K + E + M G+ + Y ++I F ++ A
Sbjct: 282 LTPDVISYNTLIC-GFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+++ ++A KG + D + L+ +G + + + V S + +V G
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG 400
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
SK+ A+++ + ++ GC P TY ++N C++G S A + + KG
Sbjct: 401 LSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPD 460
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ------ 288
+ +++++ Y K + A+ ++ M G P+V YN+L++ +A+ L
Sbjct: 461 IFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFK 520
Query: 289 --LEK--------YTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
LEK Y +I ++ R+ ++ + E + G D
Sbjct: 521 AMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 2/215 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TP Y L + L K+ + ++ F+ M EKG + Y LI SF +V A
Sbjct: 492 ITPDVI-TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVN 173
ELFKE + +G+ D+ L+ G ++K E+ ++ K + + S I +++N
Sbjct: 551 MELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMIN 610
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
F + A K++ ++ C P TY +I++YC+ G A +E KG
Sbjct: 611 AFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
++ T R+ +A+ ++ M G P
Sbjct: 671 SFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM-LRD 129
G+ G+ E + F M +PSV S+ +I + V F +A + M ++D
Sbjct: 87 GRKGKVQEAVNVFERMDFYDC--EPSVQ-----SYNAIMNILVEYGYFSQAHKVYMRMKD 139
Query: 130 LEVFLKLVLMYIE------EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ ++ + I G L ++ +M + C +++GF K
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++++++ QG P +T+ +I+ C+ G ++EK+F ++ ++G + ++ +
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G I +A RL+ + +G P+V YN+L+
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLI 293
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 114 AEELFKEAE-EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVI 171
A ++F + + E G LE + ++ G E +V+ M KN + + + + I
Sbjct: 23 ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGI 82
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ + ++ AV V+E++ C P +Y +I+N G +S+A KV++ M+ G
Sbjct: 83 MRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGI 142
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
V ++ + + TGR A+RL+ M +GCE N Y +++ G K Q+E
Sbjct: 143 YPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVIS--GFYKENCQIEA 200
Query: 292 Y 292
Y
Sbjct: 201 Y 201
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 153/344 (44%), Gaps = 20/344 (5%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
S G++LD Y +M+ F+K G + E + + P Y +L + L + G
Sbjct: 511 SRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSI---PFDVVTYNVLINGLLEHG 567
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+ +E + M E G+ + + Y +I ++ E+ A EL+ E + ++
Sbjct: 568 K-YEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCN 626
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
LV+ E G +EK + V+ M ++ + I V++N SK A ++++EQL+
Sbjct: 627 TLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDM 686
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G Q Y ++I +CR+ + KA V M + GF V Y++++ Y ++ ++ A
Sbjct: 687 GLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKA 746
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISA 298
+ +M +G PN+ YN L+ A + + ++ Y T+IS
Sbjct: 747 LATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISG 806
Query: 299 YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y ++ Y E G V + +++ F+K+ ++++
Sbjct: 807 YGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQ 850
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M G + D Y I+ K G + L E +K+ + P+ Y L DS
Sbjct: 261 YEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREM--KKMGVDPNHV-AYTTLIDS 317
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G A+E + +G+ D + +L+ ++ K AE++F+ + ++ +
Sbjct: 318 LFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPN 377
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y + G +E+ +++ M+ +N + I+NG++K+ A+ V +
Sbjct: 378 SITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMK 437
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ Q IP YA +I+ YC+ G A ++ EM+ G V + +V +
Sbjct: 438 KMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGK 497
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
R+ +A L+ + +G + Y SLMD
Sbjct: 498 RMDEAEELLKDVTSRGLLLDHVNYTSLMD 526
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 161/352 (45%), Gaps = 30/352 (8%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR------KLDLTPSSTHMYKI 65
+MK G+ + Y ++++ +K G + + A C+S+ LDL +T
Sbjct: 298 EMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFA----CQSQLVVRGMTLDLVMCTT----- 348
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L D L KS + E FR + + ++ + Y +LI + + +++ E L +E EEK
Sbjct: 349 LVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKH 408
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ ++ + ++ Y ++G++++ + V++ M + + + + ++++G+ K A
Sbjct: 409 INPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIAT 468
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+Y ++ G V + ++N R +AE++ ++ +G V Y+S++ +
Sbjct: 469 DLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGF 528
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGR--AKNL----------RQLE 290
K G+ A+ +V +M K +V YN L++ HG+ AK++
Sbjct: 529 FKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQA 588
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y +I AY E D ++ +NE + + + +V S+ +IE+
Sbjct: 589 TYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEK 640
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 115/241 (47%), Gaps = 18/241 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L D K+G L M+++G+L D Y +LI F E A+ L E
Sbjct: 150 FNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEIS 209
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI-SDCIS-CVIVNGFSKRRA 180
E ++D VF I++ + K+ LN+ +D I+ I++ + K+
Sbjct: 210 ESRGVKD-SVFFN-----IDDRI----------KKDDNLNLEADLITYTTIISTYCKQHG 253
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +YE++I G +P VTY+SI+N C+ G S+A+++ EM++ G D VAY++
Sbjct: 254 LEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTT 313
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
++ K G +A +++ +G ++ + +L+D ++ ++ E +S N
Sbjct: 314 LIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLN 373
Query: 301 M 301
+
Sbjct: 374 L 374
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/353 (18%), Positives = 147/353 (41%), Gaps = 35/353 (9%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKI 65
L E+M+ G++ D Y ++ F K G+ +K +L E ESR +
Sbjct: 167 LDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGV------------ 214
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
K F I + + D Y ++I ++ ++ A L++E G
Sbjct: 215 ------KDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIING 268
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
L D+ + +V ++G + + E++ MK ++ + +++ K + W A
Sbjct: 269 FLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAF 328
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
QL+ +G V ++++ + +AE +F + + + Y++++ Y
Sbjct: 329 ACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGY 388
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL--------RQLEK------ 291
K G + L+ +M+ K PNV Y+S+++ + + L + L++
Sbjct: 389 CKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNA 448
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y +I Y A + ++ YNE +++G ++ + ++V + +++E
Sbjct: 449 YVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDE 501
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 125/312 (40%), Gaps = 50/312 (16%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L + +MKS I+ S ++ + G+ EK A+ + E + + P+ ++
Sbjct: 604 DNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEK--AMNVLNEMSVMGIHPNLV-IH 660
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++L ++ KSG+A +L+ + + G+ + Y +LI F + K A + K
Sbjct: 661 RVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIR 720
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTL--------------------------------- 150
G + D + L+ Y E V+K L
Sbjct: 721 DGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAE 780
Query: 151 --EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
E+ + MK LN +++G+ K ++++Y ++++QG +P TY +I+
Sbjct: 781 RDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLIS 840
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI------------RDAMR 256
+ ++G +A ++ EMQ +G Y ++ + + DA
Sbjct: 841 DFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKN 900
Query: 257 LVAKMKPKGCEP 268
L+ +M KG P
Sbjct: 901 LITEMNDKGFVP 912
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 119/259 (45%), Gaps = 16/259 (6%)
Query: 95 PSVYAS--LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
P+VY L+ ++ + + +A +L + + + D + ++ + + G+V +
Sbjct: 43 PNVYTHNVLVHAWCKMGNLILALDLLRNVDVE---VDTVTYNTVIWGFCQHGLVNQAFGF 99
Query: 153 VESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+ M + D I+C ++V GF + ++ + L+S G + + ++I+ YC
Sbjct: 100 LSIMVKKD-TCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYC 158
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM-KPKGCEPNV 270
+ G S A + M+++G +V+Y++++ + K G A L+ ++ + +G + +V
Sbjct: 159 KAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSV 218
Query: 271 WIYNSLMDMHGRAKNLR---QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
+ ++ D + NL L YTT+IS Y + Y E +NG + D
Sbjct: 219 FF--NIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTY 276
Query: 328 GIMVGVFSK---LSQIEEL 343
+V K LS+ +EL
Sbjct: 277 SSIVNGLCKDGRLSEAQEL 295
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + H + + L + G E + F++MK GIL D Y+ LI F V A E
Sbjct: 277 PLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASE 336
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGF 175
+FKE G+L ++ + L+ + +EG V+K LEV E MKN+ + + D S ++++GF
Sbjct: 337 VFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGI-LPDVYSYSILIDGF 395
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
++ +A+K +E++ S P Y S+I Y + ++ A K F MQ+ G
Sbjct: 396 CRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDT 455
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A + ++++Y + A+ L K + G N + YN +
Sbjct: 456 IACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFI 497
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 136/298 (45%), Gaps = 4/298 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + M+ G+ D+ I+ + + D K AL + + + P S Y
Sbjct: 440 LKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYS---YNEF 496
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ + + L+ M ++ +L D Y++LI FA + A LF + + G+
Sbjct: 497 IHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGI 556
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+++ + L+ ++I + ++ + + MK + + +V GF A
Sbjct: 557 TFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARA 616
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++ +GC P VTY IN Y ++ ++A K++ +M+++G + Y+ ++A +
Sbjct: 617 LFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFC 676
Query: 247 KTGRIRDAMRLVAKMKPKG-CEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
TG + A L +MK +G C PNV +Y L++ + + Q EK + A ++R
Sbjct: 677 NTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSR 734
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 124/266 (46%), Gaps = 3/266 (1%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEI 79
L++ C+ ++ + G ++ + +F E ++ + P + Y IL D + GR +
Sbjct: 278 LNNHCFNAVIYGLCQGGILDEASEVFKEMKNS--GILPD-VYSYSILIDGFCRKGRVDQA 334
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+ F++M+ GIL + Y+ LI F V A E+F+E + G+L D+ + L+
Sbjct: 335 SEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDG 394
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ +G ++ ++ E M + + S C ++ G+ K + + A+K + + G P
Sbjct: 395 FCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPD 454
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+ I++ YCR ++KA + + Q+ G +Y+ + + A++L+
Sbjct: 455 TIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLP 514
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKN 285
M + P+V Y++L+ + N
Sbjct: 515 VMLKRNVLPDVVNYSTLISCFAKRLN 540
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 146/365 (40%), Gaps = 55/365 (15%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +E+MK++GI+ D Y +++ F + GD + + E S + +PS+ + Y L
Sbjct: 370 LEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSN--NFSPSAFN-YCSL 426
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
KS + LK FR M++ G+ D ++ + + A L ++ +E G+
Sbjct: 427 IKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGV 486
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE-----LNISDCISC------------ 169
+ + + + + EK L+++ M +N S ISC
Sbjct: 487 HFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVM 546
Query: 170 ------------------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+++N F A ++++ + P Q+ Y S++ +C
Sbjct: 547 LFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFC 606
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
G ++A +F EM ++G VV Y+ + Y K + A +L KMK +G P+
Sbjct: 607 NTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQI 666
Query: 272 IYNSLM-----------------DMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNE 314
+Y L+ +M + + YT +I++Y + D K Y E
Sbjct: 667 LYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEE 726
Query: 315 FRMNG 319
R G
Sbjct: 727 MRAKG 731
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 5/271 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++MK++GI+ D Y +++ F + G ++ + +F E R + P + + Y IL D
Sbjct: 303 FKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFK--EMRNSGILP-NIYSYSILIDG 359
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K GR + L+ F +MK GIL D Y+ LI F ++ A + ++E
Sbjct: 360 FCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPS 419
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVY 188
+ L+ Y + L+ M+ + D I+C I++ + ++ + A+ +
Sbjct: 420 AFNYCSLIKGYYKSKQFANALKEFRIMQKLGM-WPDTIACNHILSIYCRKPDFNKALALS 478
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E+ G +Y I+ CR + KA ++ M ++ VV YS++++ + K
Sbjct: 479 EKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKR 538
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
A+ L KM G NV Y L+++
Sbjct: 539 LNSEKAVMLFIKMTKVGITFNVKTYTILINL 569
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 93 EDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
E P+V Y + I + VA L + K + F ++ + G++++
Sbjct: 241 ETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEAS 300
Query: 151 EVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
EV + MKN+ + + D S ++++GF ++ A +V++++ + G +P +Y+ +I+
Sbjct: 301 EVFKEMKNSGI-LPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDG 359
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
+C+ G KA +VF EM+ G V +YS ++ + + G + A++ +M P+
Sbjct: 360 FCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPS 419
Query: 270 VWIYNSLMDMHGRAKNL 286
+ Y SL+ + ++K
Sbjct: 420 AFNYCSLIKGYYKSKQF 436
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
KN LN + C + VI G + A +V++++ + G +P +Y+ +I+ +CR G
Sbjct: 274 KNQPLN-NHCFNAVIY-GLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRV 331
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+A +VF EM+ G + +YS ++ + K GR+ A+ + +MK G P+V+ Y+ L
Sbjct: 332 DQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSIL 391
Query: 277 MDMHGRAKNLRQLEKYTTVISAYNMARE-FDMC 308
+D R ++ K+ +++ N + F+ C
Sbjct: 392 IDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYC 424
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 6/305 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
EKMK G+ +S Y I+ +I + F E + + T +Y L D
Sbjct: 728 EKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGI---LPDTIVYTTLVDGF 784
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G KFF +M + I D Y ++I F I ++ A +LF E +G+ D+
Sbjct: 785 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDI 844
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F +L+ Y + G ++ V M A + + +++G K +A ++ +
Sbjct: 845 ITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 904
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P TY SI+N C+ G +A K+ E + G + V Y++++ Y K+G
Sbjct: 905 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 964
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEKYTTVISAYNMAREFDM 307
+ A ++ +M KG +P + +N LM+ +HG ++ +L + A F+
Sbjct: 965 MDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNC 1024
Query: 308 CVKFY 312
VK Y
Sbjct: 1025 LVKQY 1029
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 138/313 (44%), Gaps = 19/313 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ + G+ + Y ++ ++G + L L E + TP Y + +
Sbjct: 657 FREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELK--GYTPDVIS-YSTVING 713
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G ++ K MK+KG+ + Y S+I I ++ AEE F E +G+L D
Sbjct: 714 YCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPD 773
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V+ LV + + G + + M + ++ I++GF + A K++
Sbjct: 774 TIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 833
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ +G P +T+ ++N YC+ G A +V M Q G VV Y++++ K G
Sbjct: 834 EMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 893
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YT 293
+ A L+ +M G +PN++ YNS+++ ++ N+ + K YT
Sbjct: 894 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 953
Query: 294 TVISAYNMAREFD 306
T++ AY + E D
Sbjct: 954 TLMDAYCKSGEMD 966
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 140/334 (41%), Gaps = 19/334 (5%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ +M S I D Y I+ F +IGD + LF E R L+ + L +
Sbjct: 796 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLE---PDIITFTELMN 852
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K+G + + M + G + Y +LI ++ A EL E + G+
Sbjct: 853 GYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 912
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + +V + G +E+ +++V + A LN +++ + K A ++
Sbjct: 913 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 972
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ +G P VT+ ++N +C G+ EK+ M KG ++ +V Y
Sbjct: 973 TEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIR 1032
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKY 292
++ A + M +G EP+ Y +L+ H A+N+++ + Y
Sbjct: 1033 NNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTY 1092
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
+ +I + ++F + +++ R +G D+ +
Sbjct: 1093 SVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEI 1126
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 3/275 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M AG + Y +++ K GD + L E K+ L P+ Y + +
Sbjct: 867 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM--WKIGLQPN-IFTYNSIVNG 923
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSG E +K + + G+ D Y +L+ ++ E+ A+E+ E KG+
Sbjct: 924 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPT 983
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ + GM+E +++ M + + +V + R AA +Y+
Sbjct: 984 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYK 1043
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ S+G P TY +++ +C +A +F EM+ KGF V YS ++ + K
Sbjct: 1044 DMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRK 1103
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+ +A + +M+ G + I++ D + K
Sbjct: 1104 KFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGK 1138
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 22/244 (9%)
Query: 93 EDPSVYASLICSFASIAEVKVAEELFKEAE-----EKGMLRDLEVFLKLVLMYIEEGMVE 147
+D V SLI SF ++ V E + + K D VF + +E GM+
Sbjct: 556 KDLKVAQSLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLP 615
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKR-RAYWAAVKVYEQLISQGCIPGQVTYASI 206
+ +V E M N L +S V + SK A+ V+ + G +Y +
Sbjct: 616 EARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIV 675
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+ C++G ++A + + M+ KG+ V++YS+++ Y + G + +L+ KMK KG
Sbjct: 676 IHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGL 735
Query: 267 EPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVK 310
+PN + Y S++ + R L + E+ YTT++ + + K
Sbjct: 736 KPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASK 795
Query: 311 FYNE 314
F+ E
Sbjct: 796 FFYE 799
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 148/355 (41%), Gaps = 19/355 (5%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L M G ++ YC ++ FYK ++ ++ A L E K + P K
Sbjct: 164 AALRLLNNMPGQGCEFNAVSYCAVISGFYK--ENCQIEAYHLFDEMLKQGICPDILTFNK 221
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
++ L K G E K F + ++G+ + + I + A L + +
Sbjct: 222 LI-HVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ D+ + L+ + + + + + M N+ + ++ I+NGF K A
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
K+ + +G IP + TY+S+IN C G ++A VF E +KGF ++ Y+++V
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG 400
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYN----------SLMDMHGRAKN------LRQ 288
K G + A++L+ M GC P++W YN L D +G + +
Sbjct: 401 LSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPD 460
Query: 289 LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ + T+I Y R D ++ + +G D ++ K +++ +
Sbjct: 461 IFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNV 515
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 3/241 (1%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G + D Y ++ GD + A+F E + S +Y L L K G
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK---HSIILYNTLVKGLSKQGLV 407
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
+ L+ +DM E G D Y ++ + + A + +A KG + D+ F L
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTL 467
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ Y ++ ++K +E++++M + + ++NG K R V ++ ++ +GC
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P +TY +I ++C+ S+A ++F EM+ +G +V +++ G + A
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 257 L 257
L
Sbjct: 588 L 588
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 109/250 (43%), Gaps = 35/250 (14%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + K+G K RD KG + D Y+SLI + ++ A +F EA
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-------------------------- 156
EKG + ++ LV ++G+V + L++++ M
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443
Query: 157 -KNAELNISDCISCV--------IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
N LN + C+ +++G+ K+R A+++ + ++S G P +TY +++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N C+ F M +KG ++ Y+ ++ + K ++ +AM L +MK +G
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Query: 268 PNVWIYNSLM 277
P++ +L+
Sbjct: 564 PDIVTLCTLI 573
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 119/285 (41%), Gaps = 17/285 (5%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
LTP ++C K + E + M G+ + Y ++I F ++ A
Sbjct: 282 LTPDVISYNTLIC-GFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+++ ++A KG + D + L+ +G + + + V S + +V G
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG 400
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
SK+ A+++ + ++ GC P TY ++N C++G S A + + KG
Sbjct: 401 LSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPD 460
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ------ 288
+ +++++ Y K + A+ ++ M G P+V YN+L++ +A+ L
Sbjct: 461 IFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFK 520
Query: 289 --LEK--------YTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
LEK Y +I ++ R+ ++ + E + G D
Sbjct: 521 AMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 2/215 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TP Y L + L K+ + ++ F+ M EKG + Y LI SF +V A
Sbjct: 492 ITPDVI-TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVN 173
ELFKE + +G+ D+ L+ G ++K E+ ++ K + + S I +++N
Sbjct: 551 MELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMIN 610
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
F ++ A K++ ++ C P TY +I++YC+ G A +E KG
Sbjct: 611 AFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
++ T R+ +A+ ++ M G P
Sbjct: 671 SFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM-LRD 129
G+ G+ E + F M +PSV S+ +I + V F +A + M ++D
Sbjct: 87 GRKGKVQEAVNVFERMDFYDC--EPSVQ-----SYNAIMNILVEYGYFSQAHKVYMRMKD 139
Query: 130 LEVFLKLVLMYIE------EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ ++ + I G L ++ +M + C +++GF K
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++++++ QG P +T+ +I+ C+ G ++EK+F ++ ++G + ++ +
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G I +A RL+ + +G P+V YN+L+
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLI 293
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 114 AEELFKEAE-EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVI 171
A ++F + + E G LE + ++ G E +V+ M KN + + + + I
Sbjct: 23 ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGI 82
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ + ++ AV V+E++ C P +Y +I+N G +S+A KV++ M+ G
Sbjct: 83 MRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGI 142
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
V ++ + + TGR A+RL+ M +GCE N Y +++ G K Q+E
Sbjct: 143 YPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVIS--GFYKENCQIEA 200
Query: 292 Y 292
Y
Sbjct: 201 Y 201
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M + G+ ++ Y ++ + + G+ +F + K+++ P + Y L L
Sbjct: 478 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT--KVNVLPD-LYCYNSLIFGL 534
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR E K+F M+E+G+L + Y+ LI + +++ AE+L + + G+ +
Sbjct: 535 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 594
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+++ L+ Y + +EK +SM + + + + I ++++ S AA +V
Sbjct: 595 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 654
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G +P Y+S+I+ C+ KA + EM +KG D +V Y++++ K+G
Sbjct: 655 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 714
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
I A + + KG PN Y SL+D
Sbjct: 715 ISYARNVFNSILAKGLVPNCVTYTSLID 742
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 134/290 (46%), Gaps = 8/290 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYKIL 66
Y+ +M+ G++ + Y ++ + K GD E L R LD L P+ +Y L
Sbjct: 546 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV----QRMLDTGLKPNDV-IYIDL 600
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+S KS ++ F+ M ++G++ D +Y LI + +S ++ A + E+ G
Sbjct: 601 LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGS 660
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ V+ L+ + EK +++ M ++ + +++G K A
Sbjct: 661 VPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARN 720
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+ ++++G +P VTY S+I+ C++G S A ++ EM G YS +
Sbjct: 721 VFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCS 780
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
G + AM L+ +M +G ++ +N+L+D + +++ K VI
Sbjct: 781 SAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVI 829
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 3/276 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M AGI D Y ++EA+ K+ + + + +E R L +T Y +L L
Sbjct: 233 EFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGL---NTVTYNVLIAGL 289
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+SG E F +DM++ G++ D Y +LI A+ L E + ++
Sbjct: 290 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 349
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
V+ L+ ++ EG ++ ++++ M A + + +V G K A + +Q
Sbjct: 350 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 409
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ P +TY II + R A ++ EM+ G V YS M+ ++G
Sbjct: 410 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 469
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
A L+ +M KG +PN ++Y L+ + R N+
Sbjct: 470 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 505
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 123/277 (44%), Gaps = 5/277 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ + M+ G+V D Y ++ K S + AL E +L + +Y L D
Sbjct: 301 FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELK---PNVVVYANLID 357
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ G A E K ++M G+ + Y +L+ + ++ A L K+
Sbjct: 358 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 417
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + ++ + + ++ M+NA ++ + ++++G + A +
Sbjct: 418 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 477
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ ++G P YA +I+ YCR G S A ++F +M + + Y+S++ K
Sbjct: 478 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 537
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
GR+ ++ + A+M+ +G PN + Y+ L +HG KN
Sbjct: 538 GRVEESTKYFAQMQERGLLPNEFTYSGL--IHGYLKN 572
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 122/298 (40%), Gaps = 28/298 (9%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N ++ ++ G V D Y ++ K D EK + E + +D +
Sbjct: 644 NMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD---PNIV 700
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D L KSG F + KG++ + Y SLI + ++ A L+ E
Sbjct: 701 CYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEM 760
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRA 180
G+ D V+ L G +E+ + ++E M +IS + +V+GF KR
Sbjct: 761 LATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNN--LVDGFCKRGK 818
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+K+ ++ +G +P +T +II+ G S+ +F+E+QQK + +SS
Sbjct: 819 MQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSS 878
Query: 241 ------------------MVAMYGKTGRIRDAMRL----VAKMKPKGCEPNVWIYNSL 276
M+ + K G + A+ L VAK P GC + I ++L
Sbjct: 879 LFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNL 936
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
R V LV Y + G V+ EVV M++ + S ++ + A KV
Sbjct: 172 RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKV 231
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
E ++ G P TY+++I AYC++ + A+KV +EM+++G V Y+ ++A +
Sbjct: 232 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 291
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+G + +A M+ G P+ + Y +L++ G K+ R E
Sbjct: 292 SGAVEEAFGFKKDMEDYGLVPDGFTYGALIN--GLCKSRRSNE 332
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 77/195 (39%), Gaps = 39/195 (20%)
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS- 239
YW++ ++ P +A + + C L++ A + I+M + VV S
Sbjct: 109 YWSSPQLAPS------APAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLASI 162
Query: 240 ----------------SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+V Y K+GR++DA +V M+ +G P++ N+L+ RA
Sbjct: 163 HRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRA 222
Query: 284 KNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
+ L K Y+T+I AY REFD K E R G ++
Sbjct: 223 DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTY 282
Query: 328 GIMVGVFSKLSQIEE 342
+++ + +EE
Sbjct: 283 NVLIAGLCRSGAVEE 297
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 142/307 (46%), Gaps = 13/307 (4%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S + +MK G+ + Y I+ F+K+ + +LF E R + P Y
Sbjct: 248 SAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEM--RYMYCRPD-VFTYT 304
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L LGK+GR E F+ +M+ +G D V ++I + +LF+E
Sbjct: 305 ELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVS 364
Query: 125 GMLRDLEVFLKLV-LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ ++ + ++ ++ + V + E MK + ++ S ++++GF K
Sbjct: 365 HCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEK 424
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ + E++ +G P Y S+I+A + Y A ++F E+++ Y+ M+
Sbjct: 425 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIK 484
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-------KNLRQLEKYTTV- 295
GK GR+ DA+ L +M GC PNV+ YN+LM RA +R+++++ +
Sbjct: 485 HLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLP 544
Query: 296 -ISAYNM 301
I++YN+
Sbjct: 545 DINSYNI 551
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 11/243 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++E+MK +GI Y +++ F K EK L E + + P++ Y L D
Sbjct: 393 WFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAA---YCSLID 449
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+LGK+ R + F+++KE VYA +I + A LF E + G
Sbjct: 450 ALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTP 509
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKN----AELNISDCISCVIVNGFSKRRAYWAA 184
++ + L+ M+++ L + M+ ++N + +I+NG +K A
Sbjct: 510 NVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYN----IILNGLAKTGGPHRA 565
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++ + + P V+Y ++++A G++ +A ++ EM GF+ ++ YSS++
Sbjct: 566 MEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEA 625
Query: 245 YGK 247
GK
Sbjct: 626 IGK 628
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 120/276 (43%), Gaps = 2/276 (0%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +E+M + + + Y I++A ++ +V+ +F E K S Y IL
Sbjct: 355 LKLFEEMGVSHCIPNVVTYNTIIKALFE--SKSRVSEVFSWFERMKGSGISPSPFTYSIL 412
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D K+ R + + +M EKG P+ Y SLI + +A ELF+E +E
Sbjct: 413 IDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 472
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
V+ ++ + G ++ + + + M + +++G ++ A+
Sbjct: 473 SSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALT 532
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ GC+P +Y I+N + G +A ++ M+ V+Y+++++
Sbjct: 533 TMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALS 592
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
G +A L+ +M G E ++ Y+S+++ G+
Sbjct: 593 HAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR- 128
LG + + + F +K + Y S+I + + EL+ E +G +
Sbjct: 169 LGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQP 228
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ + + G + + ++ MK + + I +I++ F K A+ ++
Sbjct: 229 DTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLF 288
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ C P TY +I + G +A + EMQ++G V ++M+ GK
Sbjct: 289 EEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKA 348
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ D ++L +M C PNV YN+++
Sbjct: 349 GRLDDGLKLFEEMGVSHCIPNVVTYNTII 377
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 114/271 (42%), Gaps = 4/271 (1%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H+Y +M+ G D+ ++ K G + LF E + + Y +
Sbjct: 321 HFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLF---EEMGVSHCIPNVVTYNTII 377
Query: 68 DSLGKS-GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+L +S R E+ +F MK GI P Y+ LI F ++ A L +E +EKG
Sbjct: 378 KALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGF 437
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ L+ + + E+ + +K + S + V++ K A+
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAIN 497
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++ GC P Y ++++ R + +A +MQ+ G + +Y+ ++
Sbjct: 498 LFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLA 557
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
KTG AM ++ MK +P+ YN+++
Sbjct: 558 KTGGPHRAMEMLTNMKNSTIKPDAVSYNTVL 588
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 20/158 (12%)
Query: 186 KVYEQLISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++Y ++ ++G C P VTY+++I+A+C++G A ++ EM++ G Y+ ++++
Sbjct: 215 ELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISL 274
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
+ K + A+ L +M+ C P+V+ Y L +R L K + AY+
Sbjct: 275 FFKLDNVHGALSLFEEMRYMYCRPDVFTYTEL---------IRGLGKAGRIDEAYH---- 321
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
FY+E + G D + M+ K ++++
Sbjct: 322 ------FYHEMQREGCKPDTVVMNNMINFLGKAGRLDD 353
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
+L +T Y IL +L +GR + + F +M D Y ++ + +++E++
Sbjct: 247 ELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELET 303
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A +L E +G+ + + ++ + +EG V + VVE M + + + +++
Sbjct: 304 AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMS 363
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
GF ++ AA ++++ +G VTY ++IN CR G +AE+V EM+ KG D
Sbjct: 364 GFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV 423
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y+ ++ Y K G++ +A + KM K PNV Y +L D
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 134/278 (48%), Gaps = 8/278 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMYKILCD 68
+++M S V+ G ++ + + + E L E +R L+L P + T + +LCD
Sbjct: 276 FDEMASPPDVVTYGI---MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCD 332
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G+ + ++ DM G++ D +V+ +++ F ++ A F E +++G+
Sbjct: 333 E----GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ G +++ V++ M++ L++ V+++G+ K A V+
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ + P VTY ++ + C+ G A ++ EM KG + + Y+S++ K
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKA 508
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
G + AMR + M G +P+V+ Y +++ ++K L
Sbjct: 509 GNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKEL 546
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 7/279 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M G+VLD+ + +M F + GD F E + R L + Y L + L
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL---AADGVTYTALINGL 400
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G E + ++M++KG+ D Y LI + + ++ A + + +K + ++
Sbjct: 401 CRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNV 460
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ L ++G V E++ M K ELNI S ++NG K A++
Sbjct: 461 VTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS--LINGLCKAGNLEQAMRTM 518
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ G P TY +II A C+ +A + EM KG +V Y+ ++ + +
Sbjct: 519 IDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 578
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
GR+ RL+ M K PN YNSLM + KN++
Sbjct: 579 GRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMK 617
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 120/277 (43%), Gaps = 3/277 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KM + + Y + + K GD L E S+ L+L + Y L +
Sbjct: 448 HNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL---NIFTYNSLING 504
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G + ++ DM E G+ D Y ++I + E+ A L +E +KG+
Sbjct: 505 LCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G VE ++E M ++ + ++ + + + ++Y+
Sbjct: 565 IVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYK 624
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++SQ +P + TY +I +C+ +A EM +KGF +Y++++ + K
Sbjct: 625 GMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKK 684
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ +A RL KM+ +YN +D+ NL
Sbjct: 685 KFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNL 721
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 94/229 (41%), Gaps = 48/229 (20%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
+++ GI P +++C + A +LF+E EK + LK + G
Sbjct: 217 LRQYGISPSPESCNAVLCRLP----LDEAVQLFQELPEKNTC-SYNILLKAL---CTAGR 268
Query: 146 VEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ ++ + M + D ++ ++V+G+ A+K+ ++ ++G V Y
Sbjct: 269 IKDAHQLFDEMASP----PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT 324
Query: 205 SII-----------------------------------NAYCRIGLYSKAEKVFIEMQQK 229
S+I + +CR G + A F EMQ++
Sbjct: 325 SVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR 384
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G V Y++++ + G +++A R++ +M+ KG + + Y L+D
Sbjct: 385 GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLID 433
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 122/266 (45%), Gaps = 3/266 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M + ++ D Y ++ + ++G+ + LF E R L PS Y L D L +
Sbjct: 333 MVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSL--APSVV-TYNTLIDGLCR 389
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G ++ +M + G D + + + F + + +A+ELF E +G+ D
Sbjct: 390 LGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFA 449
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
++ ++ ++ G K + E M V ++G K A ++ ++++
Sbjct: 450 YITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKML 509
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G +P VTY SII+A+ G KA +F+EM KG VV Y+ ++ Y GR++
Sbjct: 510 YNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLK 569
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMD 278
A+ +M KG PNV YN+L++
Sbjct: 570 LAILHFFEMHEKGVHPNVITYNALIN 595
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 96/193 (49%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M E GI Y +++ SF V+ A +L + + G + + LV G
Sbjct: 193 MVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE 252
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+E+ E+++ M L +S ++ G+ ++ A ++ E+++S+G +P VTY +
Sbjct: 253 MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNT 312
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
I+ C+ G S A K+ M K +V+Y++++ Y + G I +A L A+++ +
Sbjct: 313 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS 372
Query: 266 CEPNVWIYNSLMD 278
P+V YN+L+D
Sbjct: 373 LAPSVVTYNTLID 385
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 124/290 (42%), Gaps = 7/290 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMYKILCD- 68
++M G D + + F K+G+ LF E +R L P ++ +I+ +
Sbjct: 401 DEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQ--PDRFAYITRIVGEL 458
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
LG +AF + + +M +G D Y I + +K A EL K+ G++
Sbjct: 459 KLGDPSKAFGMQE---EMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVP 515
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + ++ ++ G + K + M + + S V+++ ++ R A+ +
Sbjct: 516 DHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHF 575
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ +G P +TY ++IN C++ +A F EMQ KG Y+ ++
Sbjct: 576 FEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNL 635
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
G ++A+RL M + +P+ + SL+ + L + VI+A
Sbjct: 636 GHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHLENVIAA 685
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
+ VA E++ E G+ + + ++ + ++GMV++ L+++ M+ + +D
Sbjct: 182 NIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYN 241
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V+VNG S A ++ + ++ G TY +I YC G +A ++ EM +
Sbjct: 242 VLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSR 301
Query: 230 GFDKCVVAYSSMVAMYG--KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
G VV Y+++ MYG K GR+ DA +L+ M K P++ YN+L+ + R N+
Sbjct: 302 GAVPTVVTYNTI--MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 358
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/315 (19%), Positives = 126/315 (40%), Gaps = 19/315 (6%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q L +M++ G + Y ++ G+ E+ L + L++ S + Y
Sbjct: 219 QEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEV---SVYTY 275
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + G+ E + +M +G + Y +++ V A +L
Sbjct: 276 DPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVN 335
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
K ++ DL + L+ Y G + + + ++ L S +++G +
Sbjct: 336 KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDV 395
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+++ +++I G P T+ + + +C++G A+++F EM +G AY + +
Sbjct: 396 AMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIV 455
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
K G A + +M +G P++ YN +D + NL++ +
Sbjct: 456 GELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVP 515
Query: 292 ----YTTVISAYNMA 302
YT++I A+ MA
Sbjct: 516 DHVTYTSIIHAHLMA 530
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
K+V + +E G+++ SM + +L I D + + V K+ + V+ +++S+
Sbjct: 106 KVVSVKMENGVIDVVSSSEVSMPSVKL-ILDLLLWIYV----KKSLLEKCLLVFYKMVSK 160
Query: 195 GCIPGQVTYASIINAY-CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
G +P ++ R A +V+ M + G VV Y++M+ + K G +++
Sbjct: 161 GLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQE 220
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMD 278
A++L+ +M+ GC PN YN L++
Sbjct: 221 ALQLLFQMQAMGCSPNDVTYNVLVN 245
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 153/355 (43%), Gaps = 20/355 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + + ++ G+V D Y ++ K GD + AA L + K + P+ Y
Sbjct: 634 QEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLK--AAFELHDDMCKKGINPNIV-TY 690
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + L K G + + F + EKG+ + Y+++I + A + A +LF +
Sbjct: 691 NALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKL 750
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D V+ L+ + G EK L + M + + + +I +GF K
Sbjct: 751 VGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALI-DGFFKLGKLIE 809
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ E ++ P VTY +I +C +G +AE++F+EMQ++ V+ Y+S++
Sbjct: 810 AYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLH 869
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
Y + GR + L +M +G +P+ ++ ++D H + N + K
Sbjct: 870 GYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNV 929
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I A +K +E G + A G +V F + + +E
Sbjct: 930 CKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDE 984
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 4/260 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + MK G+ DS YC +++ K G++EK +LFL + TP+
Sbjct: 737 NLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPA--- 793
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ L D K G+ E + DM + I + Y LI ++ +K AE+LF E
Sbjct: 794 -FNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEM 852
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+++ ++ ++ + L+ Y G + + + M + D V+V+ K +
Sbjct: 853 QKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNW 912
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+K+ + ++S+G + Y +I+A C+ S+ KV E++++G + ++
Sbjct: 913 IKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTL 972
Query: 242 VAMYGKTGRIRDAMRLVAKM 261
V + + GR +A+R++ M
Sbjct: 973 VCCFHRAGRTDEALRVLESM 992
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 136/288 (47%), Gaps = 9/288 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L M + G++ D+ Y +++ F + S + ++ E + + L P Y L
Sbjct: 287 LELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYT--MGLKPDHV-AYTAL 343
Query: 67 CDSLGKS---GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ K G AF++ + +M + I + Y +LI I +++ AE+LF E
Sbjct: 344 INGFVKQSDIGGAFQVKE---EMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTM 400
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D++ + L+ Y + +EK E++ +K L + + IVNG
Sbjct: 401 MGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTR 460
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++++++IS G P V Y +I+ + G + +A K+ M+ +G V Y++++
Sbjct: 461 ANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVII 520
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ K G++ + + +M KG +PNV+ Y + + + RA ++ E+
Sbjct: 521 GFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAER 568
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 127/301 (42%), Gaps = 32/301 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL---------------- 53
+ +M GI D Y ++E +YK+ + EK L +E + L
Sbjct: 395 FSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCH 454
Query: 54 --DLTPSSTH--------------MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
DLT ++ +Y + L K GR E +K MK++G+ D
Sbjct: 455 CGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFC 514
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y ++I F +++ + E KG+ ++ + + Y G ++ M
Sbjct: 515 YNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEML 574
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
++ + +D I +++G+ K A + ++ QG +P T++ +I+ + G
Sbjct: 575 DSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQ 634
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A VF E+ KG V Y+S+++ K G ++ A L M KG PN+ YN+L+
Sbjct: 635 EAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALI 694
Query: 278 D 278
+
Sbjct: 695 N 695
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 141/320 (44%), Gaps = 27/320 (8%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M + I L++ Y ++ KIGD EK LF E + + P Y L +
Sbjct: 361 EEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLF--SEMTMMGIKPD-IQTYNCLIEGY 417
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + + ++K++ + + + +++ ++ A ELF+E G+ ++
Sbjct: 418 YKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNI 477
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD-CISCVIVNGFSKRRAYWAAVKVYE 189
++ +V ++EG E+ ++++ MK+ L+ C + VI+ GF K
Sbjct: 478 VIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVII-GFCKAGKMEEGKSYLV 536
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++I++G P TY + I+ YCR G AE+ FIEM G V + ++ Y K G
Sbjct: 537 EMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDG 596
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------------K 291
A M +G P+V ++ L +HG +KN + E
Sbjct: 597 NTTKAFAKFRCMLDQGVLPDVQTHSVL--IHGLSKNGKLQEAMGVFSELLDKGLVPDVFT 654
Query: 292 YTTVISAYNMAREFDMCVKF 311
YT++IS N+ +E D+ F
Sbjct: 655 YTSLIS--NLCKEGDLKAAF 672
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 127/303 (41%), Gaps = 39/303 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+ M A IV D Y ++ A+ ++G E+ + + E + P+ Y ++
Sbjct: 221 YKGMLGA-IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEK--GCIPNLV-TYSVVIAG 276
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++G E L+ R M KG+L D +YA+LI F + + E G+ D
Sbjct: 277 LCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPD 336
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ ++++ + +V E M ++ ++ +++G K A ++
Sbjct: 337 HVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFS 396
Query: 190 QLISQGCIPGQVTY-----------------------------------ASIINAYCRIG 214
++ G P TY +I+N C G
Sbjct: 397 EMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCG 456
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
++A ++F EM G +V Y+++V K GR +A++++ MK +G P+V+ YN
Sbjct: 457 DLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYN 516
Query: 275 SLM 277
+++
Sbjct: 517 TVI 519
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 115/251 (45%), Gaps = 5/251 (1%)
Query: 67 CDSLGKS---GRAFEIL-KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
C+SL K G E+ K ++ M I+ D Y +LI ++ + +V+ + + + E
Sbjct: 201 CNSLSKDLLKGNRVELFWKVYKGML-GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDME 259
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
EKG + +L + ++ G V++ LE+ SM N L + I +++GF +++
Sbjct: 260 EKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRST 319
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ +++ + G P V Y ++IN + + A +V EM + Y +++
Sbjct: 320 EGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALI 379
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
K G + A L ++M G +P++ YN L++ + + +N+ + + I N+
Sbjct: 380 HGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLT 439
Query: 303 REFDMCVKFYN 313
MC N
Sbjct: 440 ANAYMCGAIVN 450
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 131/317 (41%), Gaps = 52/317 (16%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L D K G + FR M ++G+L D ++ LI + +++ A +F E +KG
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
++ D+ + L+ +EG ++ E+ + M +N + ++NG K A
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAR 707
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG-----------FDKC 234
++++ + +G VTY++II YC+ ++A ++F M+ G D C
Sbjct: 708 ELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGC 767
Query: 235 -----------------------VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
A+++++ + K G++ +A +LV M PN
Sbjct: 768 CKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHV 827
Query: 272 IYNSLMDMHGRAKNLRQLEK----------------YTTVISAYN-MAREFDMCVKFYNE 314
Y L++ H N+++ E+ YT+++ YN + R +M ++E
Sbjct: 828 TYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEM-FSLFDE 886
Query: 315 FRMNGGVIDRAMAGIMV 331
G D +MV
Sbjct: 887 MVARGIKPDDLAWSVMV 903
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 99/218 (45%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y L ++ + G+ E DM+EKG + + Y+ +I +V A EL +
Sbjct: 233 YTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRS 292
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
KG+L D ++ L+ + + + +++ M L ++NGF K+
Sbjct: 293 MANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSD 352
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +V E++ ++ TY ++I+ C+IG KAE +F EM G + Y+
Sbjct: 353 IGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNC 412
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ Y K + A L+ ++K + N ++ ++++
Sbjct: 413 LIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVN 450
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ ++ + Y ++ + +IG ++ +LF E +R + P + ++ D+
Sbjct: 849 FMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVAR--GIKPDDL-AWSVMVDA 905
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLI---CSFASIAEVKVAEELFKEAEEKGM 126
K G + LK DM +G+ ++Y LI C +++EV ++ E E++G
Sbjct: 906 HLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVL---KVLDEVEKQGS 962
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI 163
L LV + G ++ L V+ESM + LN+
Sbjct: 963 KLSLATCGTLVCCFHRAGRTDEALRVLESMVRSFLNL 999
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 154/365 (42%), Gaps = 54/365 (14%)
Query: 25 YCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILK 81
Y +M+ + K+G D K+ +EC++ Y IL ++ R + L+
Sbjct: 267 YNSLMDGYCKLGRVDDGLKLLLQMVECDNF------PDIQTYNILVAGFSRANRLDDALE 320
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA--------------EEKGML 127
F+ + G + + Y ++I ++ A+ F EA + K +
Sbjct: 321 LFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRID 380
Query: 128 RDLEVFLKL--------VLMY-------IEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
E+F KL V+ Y ++ G +E L+ E M + + V++
Sbjct: 381 EACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVI 440
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+G K + A KV+EQ++ +GC+P +TY ++I+ + + +A K+ M KG +
Sbjct: 441 DGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 500
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQL 289
V Y S+V + K I +A ++A+M+ +GCEP ++I+ SL+ + GRA+ Q+
Sbjct: 501 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 560
Query: 290 EK-------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
YT++I ++ G D G ++ FSK
Sbjct: 561 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK 620
Query: 337 LSQIE 341
+ +E
Sbjct: 621 IGNVE 625
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 157/351 (44%), Gaps = 31/351 (8%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M +AG + D+ Y +++ K+G ++ LF E + + L ++L
Sbjct: 148 EEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELF---ERMRKSGCLGDYVTFMTLIEAL 204
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G+ E + +R+M E+G V SLI + +V A E+++ K +
Sbjct: 205 SNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSR 264
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y + G V+ L+++ M + N D + ++V GFS+ A+++++
Sbjct: 265 VAYNSLMDGYCKLGRVDDGLKLLLQMVECD-NFPDIQTYNILVAGFSRANRLDDALELFK 323
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC--VVAYSSMVAMYGK 247
L S GC P TY +II GLY +E + FD+ V++Y++++
Sbjct: 324 LLSSYGCKPNAATYTTIIQ-----GLYDAQR---MEEAKAFFDEALDVISYTTVIKGLAD 375
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKN-LRQLEK------------ 291
+ RI +A L K+K GC PNV Y +++D GR ++ L+ E
Sbjct: 376 SKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTT 435
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT VI A+ K + + G V D ++ FSK S+++E
Sbjct: 436 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDE 486
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 3/279 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+EK+K+AG + Y +++ K G E F + P+ T Y ++ D
Sbjct: 386 FEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSC--VPTRT-TYTVVIDG 442
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ + K F M +KG + D Y +LI F+ +++ A +L KG
Sbjct: 443 LCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPT 502
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ +V + + M+ + EV+ M+ I +++ + + A +V
Sbjct: 503 AVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLT 562
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ ++GC P + Y S+I+ G +A VF M +KG + Y +++ + K G
Sbjct: 563 EMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIG 622
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ A ++ M G P+ + YNSLMD + + + + Q
Sbjct: 623 NVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ 661
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 6/230 (2%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
T Y L D K+ + E K M KG Y S++ F + + A+E+
Sbjct: 466 PDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEV 525
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI--SCVIVNGF 175
+ E+G L +F L+ Y+ +G E+ +V+ M A D I + +I F
Sbjct: 526 IAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM-TARGCAPDVILYTSLIDLLF 584
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
S R A V++ +I +GC P +TY +II + +IG A ++ M + G
Sbjct: 585 STGRV-PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC 643
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
AY+S++ Y K R+ A + +M G +PN +N L MHG K+
Sbjct: 644 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL--MHGLFKD 691
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 1/217 (0%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L D L +GR E F M EKG D Y ++I +F+ I V+ A E+ +
Sbjct: 575 LYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELM 634
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G+ D + L+ Y++ V++ V + M + + + V+++G K
Sbjct: 635 AKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKT 694
Query: 182 WAAVKVYEQLISQGCIPGQ-VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A ++++++ + +P V+Y +I+ + G S+A F EM +G Y+S
Sbjct: 695 DRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTS 754
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ K GRI +A +LV M G P+V Y++L+
Sbjct: 755 LIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALI 791
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 7/188 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M ++GI ++ + +M +K G +++ +LF E + D P + Y IL D
Sbjct: 666 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK--DEVPPTLVSYTILIDG 723
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LGK+GR E F++M ++GI+ + Y SLI S A + A++L ++ + G+ D
Sbjct: 724 LGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPD 783
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF--SKRRAYWAAVKV 187
++ + L+ I+ MV+ +V + M ++ V+ GF + R AVK
Sbjct: 784 VQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVK- 842
Query: 188 YEQLISQG 195
Q SQG
Sbjct: 843 --QHFSQG 848
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 119/295 (40%), Gaps = 40/295 (13%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++M + G++ D ++ K +K LFLE S + T S Y
Sbjct: 2 EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVS---Y 58
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ L + E KFF M + G D + +LI F + +V L +A
Sbjct: 59 NTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQA-- 116
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
L+ F V +Y +++G+ K
Sbjct: 117 ------LKRFRPDVFLYTS----------------------------VIHGYCKAGDLDT 142
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
K+ E++++ GCIP Y +I+ C++G +A ++F M++ G V + +++
Sbjct: 143 GFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIE 202
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL-EKYTTVIS 297
G++ +A L +M +G EP + + +SL+ +A + + E Y TV++
Sbjct: 203 ALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVA 257
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ +++ + G +P V ++N C+ KA ++F+EM G + +V+Y+++++
Sbjct: 4 ALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS 63
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN---------LRQLEK--- 291
++ +A + M GCEP+V + +L +HG K L Q K
Sbjct: 64 GLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTL--IHGFCKAGQPQVGHMLLNQALKRFR 121
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT+VI Y A + D K E G + D A +++ KL +++E
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 134/281 (47%), Gaps = 3/281 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++MKSAGI DS Y ++ + E+ A + E KL Y L D
Sbjct: 260 DRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEM---KLAGFSPDKVTYNALLDVY 316
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GKS R+ E ++ ++M+ G Y SLI ++A ++ A EL + EKG+ D+
Sbjct: 317 GKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDV 376
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + + G + +++ E M+N + C ++ R + +KV+E
Sbjct: 377 FTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFED 436
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + C P VT+ ++++ + + G+ S+ VF EM++ GF ++++++ Y + G
Sbjct: 437 IKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGS 496
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
AM + +M G P++ YN+++ R +Q EK
Sbjct: 497 FDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEK 537
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 136/296 (45%), Gaps = 38/296 (12%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LGK GR ++ + G D Y S+I +F S + A +FK+ EE G
Sbjct: 175 LGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPT 234
Query: 130 LEVFLKLVLMYIEEGMV-EKTLEVVESMKNAEL-----NISDCISC-------------- 169
L + ++ +Y + GM K + +V+ MK+A + + ISC
Sbjct: 235 LITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVL 294
Query: 170 ----------------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+++ + K R A++V +++ GC P VTY S+I+AY R
Sbjct: 295 KEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARD 354
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
GL A ++ +M +KG V Y+++++ + K G+ + A+++ +M+ +GC+PN+ +
Sbjct: 355 GLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTF 414
Query: 274 NSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGI 329
N+L+ MHG ++ K I + + + + F NG +D ++G+
Sbjct: 415 NALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNG--MDSEVSGV 468
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 125/277 (45%), Gaps = 16/277 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L G++G E+ F++MK G + + + +LI S++ A ++K
Sbjct: 449 WNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRML 508
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G+ DL + ++ G+ +++ +V+ MK+ ++ C +++ ++ +
Sbjct: 509 EAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIE 568
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ E++ S P V +++ + L + E+ F+E++Q+GF + ++MV
Sbjct: 569 RMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMV 628
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------- 291
++YG+ + A ++ MK G P++ YNSLM M+ R+ N + E+
Sbjct: 629 SIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIR 688
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
Y TVI AY + +E R +G D
Sbjct: 689 PDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPD 725
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 137/301 (45%), Gaps = 23/301 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSST-HMYKI 65
Y++M AG+ D Y ++ A + G SEKV A + + +LT S H Y
Sbjct: 504 YKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYA- 562
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV-AEELFKEAEEK 124
+G+ E + + GI+E +V + S ++ + E F E ++
Sbjct: 563 -------NGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQR 615
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G D+ +V +Y MV K E+++ MK S ++ +S+ + +
Sbjct: 616 GFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERS 675
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ +++++G P ++Y ++I AYCR G A +V EM++ G ++ Y++ +A
Sbjct: 676 EEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIAS 735
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR----------AKNLRQLEKYTT 294
Y +A+ +V M GC+PN YNS++D + + NLR+L+ + +
Sbjct: 736 YAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKLDPHIS 795
Query: 295 V 295
+
Sbjct: 796 M 796
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ E V + K +EL ++ I VI++ K AA + L G Y S+I
Sbjct: 148 RVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMI 207
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM-RLVAKMKPKGC 266
A+ G Y +A VF +M++ G ++ Y+ ++ +YGK G + M LV +MK G
Sbjct: 208 TAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGI 267
Query: 267 EPNVWIYNSLM 277
P+ + YN+L+
Sbjct: 268 APDSYTYNTLI 278
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 125/269 (46%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G D Y I+ K+G++ L + E + + Y + DS
Sbjct: 33 FDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCK---PNVVAYNTIIDS 89
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K E + FF +M ++GI D Y+S++ F ++ V A LFK+ E+ ++ +
Sbjct: 90 LCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPN 149
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F L+ ++ M+ + V E+M L +V+G+ R A K++
Sbjct: 150 KVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFN 209
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ +GC P +Y +IN +C+ G +A+ + EM K + YS+++ + + G
Sbjct: 210 IMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVG 269
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
R ++A L+ +M G PN+ Y+ ++D
Sbjct: 270 RPQEAQELLKEMCSYGLLPNLITYSIVLD 298
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 124/271 (45%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ ++ +M GI D Y I+ F +G + +LF + R ++ P+ + IL
Sbjct: 100 MDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVER--NVIPNKV-TFTIL 156
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K E F M EKG+ D Y +L+ + S +++ A++LF + KG
Sbjct: 157 IDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGC 216
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L+ + + G +++ ++ M + L ++ GF + A +
Sbjct: 217 APNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQE 276
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ +++ S G +P +TY+ +++ C+ G +A ++ MQ+ + + Y+ ++
Sbjct: 277 LLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMC 336
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G++ A L + + KG +P V Y ++
Sbjct: 337 TFGKLEAARELFSNLFVKGIQPTVVTYTVMI 367
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 109/227 (48%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL + KSGR E +M K + D Y++L+ F + + A+EL KE
Sbjct: 223 YNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMC 282
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+L +L + ++ + G +++ E++++M+ +++ + I +++ G
Sbjct: 283 SYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLE 342
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AA +++ L +G P VTY +I+ + GL ++A ++F EM G Y+ ++
Sbjct: 343 AARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVII 402
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+ + G +A+RL+ +M KG + + L D+ + + Q
Sbjct: 403 QGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSDLESSDEIISQF 449
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 45/278 (16%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
KL L P+ + L L + + +K F +M + G D Y+++I +
Sbjct: 3 KLGLQPTLV-TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNT 61
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+A +L K+ EEKG ++ + I
Sbjct: 62 TMALQLLKKMEEKGCKPNVVAY-----------------------------------NTI 86
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ K R A+ + +++ +G P TY+SI++ +C +G ++A +F +M ++
Sbjct: 87 IDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNV 146
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
V ++ ++ K I +A + M KG EP+V+ YN+L+D + + + +K
Sbjct: 147 IPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQK 206
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNG----GVIDRA 325
++ A V+ YN +NG G ID A
Sbjct: 207 LFNIMDRKGCAPN----VRSYN-ILINGHCKSGRIDEA 239
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
+L +T Y IL +L +GR + + F +M D Y ++ + +++E++
Sbjct: 247 ELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELET 303
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A +L E +G+ + + ++ + +EG V + VVE M + + + +++
Sbjct: 304 AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMS 363
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
GF ++ AA ++++ +G VTY ++IN CR G +AE+V EM+ KG D
Sbjct: 364 GFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV 423
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y+ ++ Y K G++ +A + KM K PNV Y +L D
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 134/278 (48%), Gaps = 8/278 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMYKILCD 68
+++M S V+ G ++ + + + E L E +R L+L P + T + +LCD
Sbjct: 276 FDEMASPPDVVTYGI---MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCD 332
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G+ + ++ DM G++ D +V+ +++ F ++ A F E +++G+
Sbjct: 333 E----GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ G +++ V++ M++ L++ V+++G+ K A V+
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ + P VTY ++ + C+ G A ++ EM KG + + Y+S++ K
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKA 508
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
G + AMR + M G +P+V+ Y +++ ++K L
Sbjct: 509 GNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKEL 546
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 7/279 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M G+VLD+ + +M F + GD F E + R L + Y L + L
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL---AADGVTYTALINGL 400
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G E + ++M++KG+ D Y LI + + ++ A + + +K + ++
Sbjct: 401 CRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNV 460
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ L ++G V E++ M K ELNI S ++NG K A++
Sbjct: 461 VTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS--LINGLCKAGNLEQAMRTM 518
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ G P TY +II A C+ +A + EM KG +V Y+ ++ + +
Sbjct: 519 IDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 578
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
GR+ RL+ M K PN YNSLM + KN++
Sbjct: 579 GRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMK 617
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 124/279 (44%), Gaps = 7/279 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KM + + Y + + K GD L E S+ L+L + Y L +
Sbjct: 448 HNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL---NIFTYNSLING 504
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G + ++ DM E G+ D Y ++I + E+ A L +E +KG+
Sbjct: 505 LCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G VE ++E M ++ + ++ + + + ++Y+
Sbjct: 565 IVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYK 624
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++SQ +P + TY +I +C+ +A EM +KGF +Y++++ + K
Sbjct: 625 GMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKK 684
Query: 250 RIRDAMRLVAKMKPK--GCEPNVWIYNSLMDMHGRAKNL 286
+ +A RL KM+ + EP+V YN +D+ NL
Sbjct: 685 KFTEARRLFEKMRKERLTAEPDV--YNFYIDLSFNEDNL 721
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 94/229 (41%), Gaps = 48/229 (20%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
+++ GI P +++C + A +LF+E EK + LK + G
Sbjct: 217 LRQYGISPSPESCNAVLCRLP----LDEAVQLFQELPEKNTC-SYNILLKAL---CTAGR 268
Query: 146 VEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ ++ + M + D ++ ++V+G+ A+K+ ++ ++G V Y
Sbjct: 269 IKDAHQLFDEMASP----PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT 324
Query: 205 SII-----------------------------------NAYCRIGLYSKAEKVFIEMQQK 229
S+I + +CR G + A F EMQ++
Sbjct: 325 SVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR 384
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G V Y++++ + G +++A R++ +M+ KG + + Y L+D
Sbjct: 385 GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLID 433
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 20/284 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M S G + D+ Y +++ EK LF E ++ + P ++Y L DS
Sbjct: 212 EMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQE--MKRNGIAPD-VYVYTTLIDSFC 268
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G + +F +M+ G + Y +LI ++ +V A E+++ KG ++
Sbjct: 269 KAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIV 328
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC-----------------ISCVIVNG 174
+ L+ + G +EK ++ + MK + I D +V+G
Sbjct: 329 TYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDG 388
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K A + + + +GC P V Y ++I+ C+ G +A++VF M + G+D
Sbjct: 389 LCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPN 448
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V YSS++ K R+ A+++++KM C PNV IY ++D
Sbjct: 449 VYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMID 492
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 167/404 (41%), Gaps = 69/404 (17%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECE-------------- 49
+ +++MK GI D Y ++++F K G E+ F E E
Sbjct: 239 EKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTAL 298
Query: 50 ------SRKLD-------------LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEK- 89
SRK+ TP+ Y L D L K+G+ + + ++ MK++
Sbjct: 299 IHAYLKSRKVSKANEVYEMMLSKGCTPNIV-TYTALIDGLCKAGKIEKASQIYKIMKKEN 357
Query: 90 --------------GILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G +P+V Y +L+ +VK A +L K +G + V+
Sbjct: 358 VEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVY 417
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ + G +++ EV +M + + +++ K + A+KV +++
Sbjct: 418 DALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLE 477
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
C P V Y +I+ C++G +A K+ + M++KG + VV Y++M+ +GK+GR+
Sbjct: 478 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEK 537
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNL----------RQLEKYTTVIS 297
+ L+ +M KGC PN Y L++ + A L R + Y VI
Sbjct: 538 CLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIE 597
Query: 298 AYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+N REF + E N V + +++ F K ++E
Sbjct: 598 GFN--REFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLE 639
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 56/246 (22%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
++ + LC +GK +A+ ++ R+M KG + D S Y+ +I + ++V+ A +LF+
Sbjct: 191 SNFSRCLC-GIGKFEKAYNVI---REMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQ 246
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E + G+ D+ V+ L+ + + G +E+
Sbjct: 247 EMKRNGIAPDVYVYTTLIDSFCKAGFIEQ------------------------------- 275
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A ++++ GC P VTY ++I+AY + SKA +V+ M KG +V Y+
Sbjct: 276 ----ARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYT 331
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGC-----------------EPNVWIYNSLMDMHGR 282
+++ K G+I A ++ MK + EPNV+ Y +L+D +
Sbjct: 332 ALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCK 391
Query: 283 AKNLRQ 288
A +++
Sbjct: 392 AYQVKE 397
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 15/294 (5%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE-----VK 112
S ++ L + +SG K + M + G VY LI S E +
Sbjct: 110 PSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLD 169
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
+AE+ + E E G++ + G EK V+ M + ++
Sbjct: 170 LAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVI 229
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
A ++++++ G P Y ++I+++C+ G +A F EM++ G
Sbjct: 230 GYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCA 289
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
VV Y++++ Y K+ ++ A + M KGC PN+ Y +L+D +A + + +
Sbjct: 290 PNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQI 349
Query: 293 TTVISAYNMA-REFDMCVKFYNEFRMNGGVIDRAMA---GIMVGVFSKLSQIEE 342
++ N+ + DM FR+ G + G +V K Q++E
Sbjct: 350 YKIMKKENVEIPDVDM------HFRVVDGASNEPNVFTYGALVDGLCKAYQVKE 397
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 105/265 (39%), Gaps = 23/265 (8%)
Query: 100 SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA 159
+L C S+ + E E++ + D ++ K++ E + E+ ++ + M+ +
Sbjct: 12 TLGCFAHSLCKSGKWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRAS 71
Query: 160 ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
+ +++ G + ++ +I++GC P + S+++AYCR G Y+ A
Sbjct: 72 SCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYA 131
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI-RDAMRLVAKMKPKGCEPNVWI------ 272
K+ +M Q G V Y+ ++ + +D + L K + E V +
Sbjct: 132 YKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNIS 191
Query: 273 ---------------YNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
YN + +M + + Y+ VI A + + + + E +
Sbjct: 192 NFSRCLCGIGKFEKAYNVIREMMSKG-FIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKR 250
Query: 318 NGGVIDRAMAGIMVGVFSKLSQIEE 342
NG D + ++ F K IE+
Sbjct: 251 NGIAPDVYVYTTLIDSFCKAGFIEQ 275
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 133/284 (46%), Gaps = 19/284 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G V D+ Y +++ + EK LF E ++ + P + Y IL DS
Sbjct: 441 KEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQE--MKRAGVNPD-VYTYTILIDSF 497
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+G + +F +M+ G + Y +L+ ++ ++ A ++F + +
Sbjct: 498 CKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNA 557
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI------SCVI----------VNG 174
+ L+ + G ++K EV E + N+ +C I ++G
Sbjct: 558 VTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDG 617
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K + A ++ + +++ GC P Q+ Y ++I+ +C+IG A++VF+ M + G+
Sbjct: 618 LCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPS 677
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y+S++ K GR+ AM+++++M C PNV Y +++D
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMID 721
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 144/317 (45%), Gaps = 36/317 (11%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++ + + LC +GK +AF+ILK +M KG + D S Y +I +V+ + L
Sbjct: 419 NTANFSRCLC-GVGKFEKAFQILK---EMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLL 474
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F+E + G+ D+ + L+ + + G++E+ + M++ + + +++ + K
Sbjct: 475 FQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLK 534
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ--------- 228
+ A ++ +++ C P VTY+++I+ C+ G KA +V+ ++
Sbjct: 535 SKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDF 594
Query: 229 --KGFDKC-----VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH- 280
+G D C VV Y +++ K ++ DA L+ M GCEPN +Y++L+D
Sbjct: 595 YFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFC 654
Query: 281 --GRAKN-------------LRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
G+ N L + YT++I D+ +K +E + +
Sbjct: 655 KIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVV 714
Query: 326 MAGIMVGVFSKLSQIEE 342
M+ SK+ +IE+
Sbjct: 715 TYTAMIDGLSKVGEIEK 731
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 3/237 (1%)
Query: 26 CQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRD 85
C++ E IG S V + F + + P+ Y L D L K+ + + +
Sbjct: 577 CEVYEKL--IGTSGNVESDFYFEGNDTCTIAPNVV-TYGALIDGLCKAQKVSDAHELLDA 633
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M G + VY +LI F I ++ A+E+F + G L + + L+ ++G
Sbjct: 634 MLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGR 693
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
++ ++V+ M N N + +++G SK A+ + + +GC P VTY +
Sbjct: 694 LDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTA 753
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
+I+ + G + K+F +M KG V Y ++ G + +A L+ +MK
Sbjct: 754 LIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMK 810
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
KVYE++++ C+ +V A+ C +G + KA ++ EM +KGF Y+ ++
Sbjct: 403 KVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFL 462
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+ ++ + L +MK G P+V+ Y L+D +A + Q +
Sbjct: 463 CQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSW 509
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 14/239 (5%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ K+G+ EK L E + +P+ Y L D LGK+G+A LK F+
Sbjct: 716 YTAMIDGLSKVGEIEKALNLLSLMEEK--GCSPNVV-TYTALIDGLGKTGKADASLKLFK 772
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M KG + Y LI + + A L E + + L+ + V +G
Sbjct: 773 QMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAV-----QG 827
Query: 145 MVEK---TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI---SQGCIP 198
+K +L ++E M++ E + ++++ FSK A++++++L+ S +
Sbjct: 828 FSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMT 887
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
YAS+I A C +A ++ EM +KG ++ + S+V + + +A++L
Sbjct: 888 STGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 85/205 (41%), Gaps = 7/205 (3%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G E L+ +K+ G Y +L+ AS +V++ + KE G D
Sbjct: 181 RHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMD-- 238
Query: 132 VFLKLVLMYIEEGM--VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + Y + + V + + + ++ + N+ + +++G + + A+
Sbjct: 239 ---RSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLH 295
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ CIP VTY ++++ + + + +++ M +G + ++S+V Y G
Sbjct: 296 RMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAG 355
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYN 274
A +L +M G P YN
Sbjct: 356 DYAYAYKLFNRMTTCGSPPGYVAYN 380
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 81/198 (40%), Gaps = 26/198 (13%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV---YASLICSFASIAEVKV 113
PS+ Y L L +G+ + ++M G D S +A +C A+
Sbjct: 202 PSAV-TYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADA-- 258
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV--- 170
E++ D + +++ +E + + + + M+ C SC+
Sbjct: 259 ----LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMR--------CNSCIPNV 306
Query: 171 -----IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
+++GF K++ + ++ ++++GC P + S+++ YC G Y+ A K+F
Sbjct: 307 VTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNR 366
Query: 226 MQQKGFDKCVVAYSSMVA 243
M G VAY+ +
Sbjct: 367 MTTCGSPPGYVAYNIFIG 384
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 62 MYKILCDSLGKSGR---AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+Y +L DS K+GR A E+ K ++ + +YASLI + ++V+ A L+
Sbjct: 853 VYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLY 912
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD 165
E KG++ DL VF+ LV IE ++ L++ + +N D
Sbjct: 913 TEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGVNWQD 959
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L E+M+S V + Y ++++F K G E L E L +ST MY
Sbjct: 834 ASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYA 893
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI 102
L +L + + E + +M KGI+ D V+ SL+
Sbjct: 894 SLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLV 931
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 143/333 (42%), Gaps = 28/333 (8%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSS 59
N + + + ++ G +S + I+ K+GD+ + +E +R DL +
Sbjct: 92 NVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLLIA- 150
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
Y + DSL K G L FF M KGI D Y SLI S A L
Sbjct: 151 ---YSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLG 207
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
KG++ +++ F LV + +EG + + ++ M + + +++G
Sbjct: 208 NMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLS 267
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
AVKV+E +I +G +P VTY+S+I+ +C+ +KA V EM G + VV +S
Sbjct: 268 QMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWS 327
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNL-RQLEK- 291
+++ + K GR A+ L M PN+ ++D H A +L R++EK
Sbjct: 328 TLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKM 387
Query: 292 --------YTTVISA------YNMAREFDMCVK 310
Y V+ +N ARE C+
Sbjct: 388 NLELNIVTYNIVLDGMCSFGKFNDARELFSCLP 420
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
+ +K F M KG+L + Y+SLI + + A + E G+ D+ + L+
Sbjct: 271 DAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLI 330
Query: 138 LMYIEEGMVEKTLEVVESMKNAE--LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
+ + G E +E+ +M N+ C +I++G K + + A+ ++ ++
Sbjct: 331 GGFCKAGRPEAAIELFCTMHEHHQLPNLQTC--AIILDGLFKCQFHSEAISLFRKMEKMN 388
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
VTY +++ C G ++ A ++F + KG VVAY++M+ K G + DA
Sbjct: 389 LELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAE 448
Query: 256 RLVAKMKPKGCEPNVWIYNSLM 277
L+ KM+ GC PN + YN L+
Sbjct: 449 DLLMKMEENGCPPNEFTYNVLV 470
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF--IEMQ 227
++NG AA + + L G T+ +IIN C++G + A IE +
Sbjct: 82 TLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGR 141
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+GFD ++AYS+++ K G + A+ + M KG +P++ YNSL +HG R
Sbjct: 142 NRGFD-LLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSL--IHGLCSFGR 198
Query: 288 QLEKYTTVISAYNMARE 304
E TT++ NM R+
Sbjct: 199 WNEA-TTLLG--NMMRK 212
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 77/181 (42%)
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M G+ D +++LI F + A ELF E L +L+ ++ +
Sbjct: 313 EMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQ 372
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ + + M+ L ++ ++++G + A +++ L S+G V Y
Sbjct: 373 FHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYT 432
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++I C+ GL AE + ++M++ G Y+ +V + I + + + MK K
Sbjct: 433 TMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGK 492
Query: 265 G 265
G
Sbjct: 493 G 493
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 91/224 (40%), Gaps = 4/224 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + ++M + G+ LD + ++ F K G E LF C + P+
Sbjct: 303 NINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELF--CTMHEHHQLPN-LQ 359
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
I+ D L K E + FR M++ + + Y ++ S + A ELF
Sbjct: 360 TCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCL 419
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
KG+ D+ + ++ +EG+++ +++ M+ ++ V+V G +R
Sbjct: 420 PSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDI 479
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
+ K Y L+ + T ++ +Y + A +VF++
Sbjct: 480 SRSTK-YLMLMKGKGLSADATTTELLISYFSANKENSALQVFLQ 522
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 140/307 (45%), Gaps = 12/307 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + +Y++M+ G+ D + ++ F G + AA E + L L P +Y
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKG--LGLVPDGV-IY 335
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ ++G E L+ +M G L D Y +L+ + AEEL E +E
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKE 395
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ DL F L+ Y +G EK L++ +++ + L +++G ++
Sbjct: 396 RGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAK 455
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++++ + ++ P VTY+ +I+++C G +A EM KG ++ Y+S++
Sbjct: 456 ANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIK 515
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLEKYTTVI 296
Y ++G ++ + + KM P++ +N+L+ +MHG +EK
Sbjct: 516 GYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQP 575
Query: 297 SA--YNM 301
A YNM
Sbjct: 576 DAVTYNM 582
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 126/259 (48%), Gaps = 3/259 (1%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+++A ++ GD + AL ++ L P +L L K R + + FR M
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGL--KPGIVTFNSVL-KGLCKHRRFDKAKEVFRAMD 254
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+ + D + LI F + EV+ A + +KE +++G+ D+ F L+ ++ G ++
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD 314
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ MK L I +++ GF + + A++V ++++ GC+P VTY +++
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N C+ AE++ EM+++G + +++++ Y + G A++L + +
Sbjct: 375 NGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLR 434
Query: 268 PNVWIYNSLMDMHGRAKNL 286
P+V YNSL+D R +L
Sbjct: 435 PDVVAYNSLIDGMCRKGDL 453
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 123/280 (43%), Gaps = 3/280 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y +MK G+V D Y ++ F + G + AL + E L P Y L +
Sbjct: 319 YLREMKGLGLVPDGVIYTMVIGGFCRAGSMSE--ALRVRDEMVGLGCLPDVV-TYNTLLN 375
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K R + + +MKE+G+ D + +LI + + A +LF + +
Sbjct: 376 GLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRP 435
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ +G + K E+ + M E+ + ++++ ++ A
Sbjct: 436 DVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFL 495
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++S+G +P +TY SII YCR G K ++ +M Q ++ +++++ Y K
Sbjct: 496 DEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKE 555
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ A + M+ + +P+ YN +++ N+ +
Sbjct: 556 ENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEE 595
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + L ++ + + D Y +++ + GD K L+ + +R ++ P+
Sbjct: 417 NFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAR--EIFPNHV- 473
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL DS + G+ E F +M KG L + Y S+I + VK ++ ++
Sbjct: 474 TYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ +L DL F L+ YI+E + V M+ + +I+NGFS++
Sbjct: 534 MQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNM 593
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A +V++++ + G P + TY S+IN + G +A ++ EM +GF
Sbjct: 594 EEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGF 643
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 113/259 (43%), Gaps = 5/259 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK G+ D + ++ + + G+ EK LF ++L P Y L D +
Sbjct: 392 EMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL--RPDVV-AYNSLIDGMC 448
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G + + + DM + I + Y+ LI S +V+ A E KG L ++
Sbjct: 449 RKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIM 508
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y G V+K + ++ M + + D I+ +++G+ K A V+
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMMQDNI-LPDLITFNTLIHGYIKEENMHGAFNVFNI 567
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + P VTY IIN + G +A +VF +M G + Y S++ + G
Sbjct: 568 MEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGN 627
Query: 251 IRDAMRLVAKMKPKGCEPN 269
++A +L +M +G P+
Sbjct: 628 SKEAFQLHDEMMHRGFAPD 646
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 3/236 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ +L D+ ++G + M KG+ + S++ A+E+F+ +
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMD 254
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
+ + D+ F L+ + G VE+ ++ + M+ + D +S ++ FS R
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVT-PDVVSFSCLIGLFSTRGKM 313
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++ G +P V Y +I +CR G S+A +V EM G VV Y+++
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL 373
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLEKYTTVI 296
+ K R+ DA L+ +MK +G P++ + +L+ + R N + L+ + T++
Sbjct: 374 LNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL 429
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%)
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
++ S+ E A+ + E E++ + D+ L+ G V+ + +V+SM N
Sbjct: 163 MVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKG 222
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
L ++ G K R + A +V+ + P ++ +I +CR+G +A
Sbjct: 223 LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAM 282
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
K + EMQQ+G VV++S ++ ++ G++ A + +MK G P+ IY ++
Sbjct: 283 KFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGF 342
Query: 281 GRAKNLRQ 288
RA ++ +
Sbjct: 343 CRAGSMSE 350
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 24/185 (12%)
Query: 179 RAYWA--AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
RA W A + Y ++S T ++++YC+ + KA+ V EM+++ VV
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL-------------------M 277
++ ++ + G + A+ LV M KG +P + +NS+ M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253
Query: 278 DMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
D A ++R + +I + E + +KFY E + G D ++G+FS
Sbjct: 254 DQCSVAPDVRS---FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTR 310
Query: 338 SQIEE 342
+++
Sbjct: 311 GKMDH 315
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
+L +T Y IL +L +GR + + F +M D Y ++ + +++E++
Sbjct: 247 ELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELET 303
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A +L E +G+ + + ++ + +EG V + VVE M + + + +++
Sbjct: 304 AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMS 363
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
GF ++ AA ++++ +G VTY ++IN CR G +AE+V EM+ KG D
Sbjct: 364 GFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV 423
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y+ ++ Y K G++ +A + KM K PNV Y +L D
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 134/278 (48%), Gaps = 8/278 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMYKILCD 68
+++M S V+ G ++ + + + E L E +R L+L P + T + +LCD
Sbjct: 276 FDEMASPPDVVTYGI---MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCD 332
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G+ + ++ DM G++ D +V+ +++ F ++ A F E +++G+
Sbjct: 333 E----GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAA 388
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ G +++ V++ M++ L++ V+++G+ K A V+
Sbjct: 389 DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVH 448
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ + P VTY ++ + C+ G A ++ EM KG + + Y+S++ K
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKA 508
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
G + AMR + M G +P+V+ Y +++ ++K L
Sbjct: 509 GNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKEL 546
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 7/279 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M G+VLD+ + +M F + GD F E + R L + Y L + L
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL---AADGVTYTALINGL 400
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G E + ++M++KG+ D Y LI + + ++ A + + +K + ++
Sbjct: 401 CRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNV 460
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ L ++G V E++ M K ELNI S ++NG K A++
Sbjct: 461 VTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS--LINGLCKAGNLEQAMRTM 518
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ G P TY +II A C+ +A + EM KG +V Y+ ++ + +
Sbjct: 519 IDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 578
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
GR+ RL+ M K PN YNSLM + KN++
Sbjct: 579 GRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMK 617
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 121/277 (43%), Gaps = 3/277 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KM + + Y + + K GD L E S+ L+L + Y L +
Sbjct: 448 HNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL---NIFTYNSLING 504
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G + ++ DM E G+ D Y ++I + E+ A L +E +KG+
Sbjct: 505 LCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G VE ++E M ++ + ++ + + + ++Y+
Sbjct: 565 IVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYK 624
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++SQ +P + TY +I +C+ +A EM +KGF +Y++++ + K
Sbjct: 625 GMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKK 684
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ +A RL KM+ + +YN +D+ NL
Sbjct: 685 KFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNL 721
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 94/229 (41%), Gaps = 48/229 (20%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
+++ GI P +++C + A +LF+E EK + LK + G
Sbjct: 217 LRQYGISPSPESCNAVLCRLP----LDEAVQLFQELPEKNTC-SYNILLKAL---CTAGR 268
Query: 146 VEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ ++ + M + D ++ ++V+G+ A+K+ ++ ++G V Y
Sbjct: 269 IKDAHQLFDEMASP----PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT 324
Query: 205 SII-----------------------------------NAYCRIGLYSKAEKVFIEMQQK 229
S+I + +CR G + A F EMQ++
Sbjct: 325 SVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR 384
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G V Y++++ + G +++A R++ +M+ KG + + Y L+D
Sbjct: 385 GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLID 433
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 1/233 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L+P + + IL ++L K G L+ F +MK G D Y +LI + S+ ++ A
Sbjct: 391 LSPD-VYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKA 449
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+L KE E G R + ++ ++ +E+ EV + M ++ + +++G
Sbjct: 450 LDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 509
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K + A ++ Q+IS+G P +TY SI+ YC+ G KA + M GF+
Sbjct: 510 LCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVD 569
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
VV Y +++ K GR + A++L+ M+ KG YN ++ R N R
Sbjct: 570 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTR 622
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ T +Y L + L + + + + +M E+GI D + +L+ + +V+ A +
Sbjct: 148 ADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLM 207
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+E G+ D F L+ ++EEG ++ L V M + + V++NG+ K
Sbjct: 208 LEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCK 267
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A+ +Q I+ G P Q+TY + +N C+ G A KV M Q+G D V
Sbjct: 268 LGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFT 327
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y+ +V K G++ +A ++ +M +GC P++ +N+L+
Sbjct: 328 YNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLI 367
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 117/236 (49%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ + L K+G+ E M E+G L D + + +LI + S ++ A +L ++
Sbjct: 328 YNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVT 387
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ F L+ + G + L + E MK++ + +++
Sbjct: 388 LKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLG 447
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + +++ S GC VTY +II+ C+ +AE+VF +M +G + + +++++
Sbjct: 448 KALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 507
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
K RI DA +L+++M +G +PN YNS++ + + ++++ ++A
Sbjct: 508 DGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTA 563
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 129/304 (42%), Gaps = 40/304 (13%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM-------- 62
E+M S+G+ D + +M+ F + G S K A L ++R L++ S T +
Sbjct: 209 EEMSSSGVAPDETTFTTLMQGFVEEG-SIKAA---LRVKARMLEMGCSPTKVTVNVLING 264
Query: 63 ----------------------------YKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
Y + L ++G LK M ++G D
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y ++ +++ A+ + + E+G L D+ F L++ +E+ L++
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
+ L+ +++N K A++++E++ S GC P +VTY ++I+ C +G
Sbjct: 385 QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLG 444
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
KA + EM+ G + V Y++++ K RI +A + +M +G N +N
Sbjct: 445 KLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 504
Query: 275 SLMD 278
+L+D
Sbjct: 505 TLID 508
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 9/260 (3%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD---SLGKS 73
G+ D + ++ A K+GD + LF E +S TP Y L D SLGK
Sbjct: 390 GLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGC--TPDEV-TYNTLIDNLCSLGKL 446
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+A ++LK +M+ G Y ++I ++ AEE+F + + +G+ R+ F
Sbjct: 447 GKALDLLK---EMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 503
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ ++ ++ +++ M + L ++ I+ + K+ A + + + +
Sbjct: 504 NTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTA 563
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
G VTY ++IN C+ G A K+ M+ KG AY+ ++ + RD
Sbjct: 564 NGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRD 623
Query: 254 AMRLVAKMKPKGCEPNVWIY 273
AM L +M G P+ + Y
Sbjct: 624 AMNLFREMTEVGEPPDAFTY 643
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 94/189 (49%)
Query: 90 GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKT 149
GI D VY L+ +++K+ E ++ E E+G+ D+ F L+ V
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204
Query: 150 LEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
+ ++E M ++ + + ++ GF + + AA++V +++ GC P +VT +IN
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
YC++G A + GF+ + Y++ V + G + A++++ M +G +P+
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324
Query: 270 VWIYNSLMD 278
V+ YN +++
Sbjct: 325 VFTYNIVVN 333
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L +L R E L R + KG+ D + LI + + + ++A LF+E +
Sbjct: 363 FNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMK 422
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G D + L+ G + K L++++ M++A S I++G K+
Sbjct: 423 SSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIE 482
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +V++Q+ QG +T+ ++I+ C+ A ++ +M +G + Y+S++
Sbjct: 483 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSIL 542
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y K G I+ A ++ M G E +V Y +L++
Sbjct: 543 THYCKQGDIKKAADILQTMTANGFEVDVVTYGTLIN 578
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 3/257 (1%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D Y +++ F+K GD K LF E R + P Y + +L K+ +
Sbjct: 218 DVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGI---PPDFVTYSSVVHALCKARAMDKAE 274
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
F R M KG+L + Y +LI ++S + K A +FKE +L D+ L+
Sbjct: 275 AFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 334
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G +++ +V ++M N + +++NG++ + +++ ++ G P
Sbjct: 335 CKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDI 394
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
T+ +I AY G+ KA +F EM+ G VV Y +++A + G++ DAM +
Sbjct: 395 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 454
Query: 261 MKPKGCEPNVWIYNSLM 277
M +G P+ + Y+ L+
Sbjct: 455 MIDQGVAPDKYAYHCLI 471
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 104/218 (47%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ + +L + G + + F +M++ G+ D Y ++I + I ++ A E F +
Sbjct: 395 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 454
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
++G+ D + L+ + G + K E++ + N +++ I+N K
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 514
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +++ ++ G P V Y+ +++ YC +G KA +VF M G + V Y +
Sbjct: 515 VMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+V Y K GRI + + L +M KG +P+ +YN ++D
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIID 612
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 126/285 (44%), Gaps = 27/285 (9%)
Query: 63 YKILCDSL---GKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEEL 117
Y IL SL GKSG+A ++L+ M E G + P V Y+++I F +V A +L
Sbjct: 185 YSILLKSLCDQGKSGQADDLLRM---MAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDL 241
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
FKE ++G+ D + +V + ++K + M N + ++ ++ G+S
Sbjct: 242 FKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSS 301
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ AV+V++++ +P VT + ++ + C+ G +A VF M KG + V +
Sbjct: 302 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFS 361
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
Y+ M+ Y G + D L M G P+++ +N L I
Sbjct: 362 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVL-------------------IK 402
Query: 298 AYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
AY D + +NE R +G D ++ ++ ++++
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 447
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 9/264 (3%)
Query: 17 GIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
G+ LD + I+ K+G D++ + L + + L P++ +Y +L D
Sbjct: 494 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDL-----TVNVGLHPTAV-VYSMLMDGYCLV 547
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+ + L+ F M GI + VY +L+ + I + LF+E +KG+ ++
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 607
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ E G M + + ++ C +++ G K R + A+ ++++L +
Sbjct: 608 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRA 667
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+T ++I + +A+ +F + + G CVV YS M+ K G + +
Sbjct: 668 MNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEE 727
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLM 277
A + + M+ GCEP+ + N ++
Sbjct: 728 AEDMFSSMQNAGCEPDSRLLNHVV 751
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 134/328 (40%), Gaps = 49/328 (14%)
Query: 43 ALFLECESRKLD---LTPSSTHMYKILCDSLGKSGRAFEILKFFRDM------------- 86
ALF SR L+P+S H Y IL D ++ R L FF +
Sbjct: 92 ALFNRAASRAQGPRVLSPTS-HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIAN 150
Query: 87 -----------------------KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
E G + D Y+ L+ S + A++L + E
Sbjct: 151 HLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE 210
Query: 124 KGML--RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G + D+ + ++ + +EG V K ++ + M + +V+ K RA
Sbjct: 211 GGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAM 270
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A Q++++G +P TY ++I Y G + +A +VF EM++ VV S +
Sbjct: 271 DKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 330
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ K G+I++A + M KG PNV+ Y +++ + L + ++ +
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 390
Query: 302 ARE---FDMCVKFYNEFRMNGGVIDRAM 326
A + F++ +K Y N G++D+AM
Sbjct: 391 APDIYTFNVLIKAY----ANCGMLDKAM 414
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ M SAGI + Y ++ + KIG ++ +LF E + + ST +Y
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK---PSTILY 607
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+ D L ++GR F +M E GI + Y ++
Sbjct: 608 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVL--------------------- 646
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ ++ F + + ++ E + +M N ++NI ++ +I F RR A
Sbjct: 647 RGLFKN-RCFDEAIFLFKE----------LRAM-NVKINII-TLNTMIAGMFQTRRVEEA 693
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ + G +P VTY+ +I + GL +AE +F MQ G
Sbjct: 694 K-DLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
>gi|414874000|tpg|DAA52557.1| TPA: hypothetical protein ZEAMMB73_743775 [Zea mays]
Length = 630
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 3/259 (1%)
Query: 19 VLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE 78
V+ + + +++A + GD LF + + LT + Y +L L G A
Sbjct: 228 VVSAEAFNPVLKAMLRAGDVNGAVKLFRFMQLKGCTLTAVT---YNVLLHGLLLCGEARA 284
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
+ R M+ +GI+ Y +++ V+ A ++ +E +G+ VF ++
Sbjct: 285 AMNIMRRMENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVIT 344
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
+ + G V++ L V E+M A + + + +++GF++ A K++E+++ CIP
Sbjct: 345 GFCKSGEVDRALMVWETMVAARVKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIP 404
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
VTY+S++ Y I S+A + EM + G ++YS +++ GR++DAM +
Sbjct: 405 NIVTYSSMVRGYFHIANSSRALSTWEEMIKVGCVPTAISYSILISGLCDVGRLKDAMMVW 464
Query: 259 AKMKPKGCEPNVWIYNSLM 277
M +GC P+ Y S+M
Sbjct: 465 KNMIGRGCAPDTIAYTSMM 483
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 121/276 (43%), Gaps = 10/276 (3%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSS 59
+++ ++ +M++ GIV Y +++ K G D+ KVA E L PS
Sbjct: 282 ARAAMNIMRRMENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQ-----EMGGQGLAPSE 336
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
++ + KSG L + M + + +Y+++I FA + AE+LF+
Sbjct: 337 -FVFSAVITGFCKSGEVDRALMVWETMVAARVKPNVVLYSAMIDGFARSGRMTEAEKLFE 395
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E + + ++ + +V Y + L E M + ++++G
Sbjct: 396 EMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGCVPTAISYSILISGLCDVG 455
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC-VVAY 238
A+ V++ +I +GC P + Y S++ C G+ ++F +M KG K V++Y
Sbjct: 456 RLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLRLFNDMLAKGDAKPDVISY 515
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ ++ +T + AM L+ +M + C+P+ N
Sbjct: 516 NVLLDALIRTNDLPRAMDLLNQMLDQMCDPDTITCN 551
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 114/258 (44%), Gaps = 8/258 (3%)
Query: 41 VAALFLECESRKLDLTP---SSTHMYKILCDSLGKSGRAFEI---LKFFRD-MKEKGILE 93
+ A F R LTP S + K +C S+ + L D + ++
Sbjct: 136 LPAFFTHSILRFPGLTPTLLSFNLLLKCICSSMVPRNPGLYLAVALGILHDVIPAWNLVP 195
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D Y++++ + A V+ A L E G++ E F ++ + G V +++
Sbjct: 196 DKFTYSTVVSALADAGCVEEAVALVHEMVVDGVV-SAEAFNPVLKAMLRAGDVNGAVKLF 254
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M+ ++ V+++G AA+ + ++ ++G +PG +TY ++++ +
Sbjct: 255 RFMQLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPGLMTYGAVVDGLVKC 314
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G A KV EM +G +S+++ + K+G + A+ + M +PNV +Y
Sbjct: 315 GRVEDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPNVVLY 374
Query: 274 NSLMDMHGRAKNLRQLEK 291
++++D R+ + + EK
Sbjct: 375 SAMIDGFARSGRMTEAEK 392
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 132/282 (46%), Gaps = 4/282 (1%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
S + +++MK G+ + Y +M ++K+G E+ L E R+ T +
Sbjct: 247 DDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPT---VYT 303
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L LGKSGR + +++M + G D + +LI +K A ELF+E
Sbjct: 304 YTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMR 363
Query: 123 EKGMLRDLEVFLKLV-LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++ + ++ ++ ++ + +E MK + S ++++GF K
Sbjct: 364 LLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRV 423
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+ + E++ +G P Y S+IN+ + Y A ++F E+++ V Y+ M
Sbjct: 424 EKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVM 483
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ +GK GR +AM L +MK GC P+V+ YN+L+ RA
Sbjct: 484 IKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRA 525
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 3/245 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ E+MK G+V S Y +++ F K EK L E + + P++ Y L +
Sbjct: 394 WLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAA---YCSLIN 450
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
SLGK+ R + F+++KE VYA +I F A LF E ++ G +
Sbjct: 451 SLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIP 510
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ + M+++ + +M+ N +I+NG ++ A++++
Sbjct: 511 DVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMF 570
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ S P V+Y +++ R GL+ +A K+ EM KGF+ ++ YSS++ GK
Sbjct: 571 AKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKV 630
Query: 249 GRIRD 253
R+
Sbjct: 631 DEDRN 635
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 127/285 (44%), Gaps = 12/285 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M+ + Y I+++ ++ A+ +LE +K + PSS Y IL D
Sbjct: 359 FEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLE-RMKKDGVVPSS-FTYSILIDG 416
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ R + L +M EKG P+ Y SLI S + A ELF+E +E
Sbjct: 417 FCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSS 476
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSKRRAYWAA 184
+ V+ ++ + + G + + + MK CI V ++ G + A
Sbjct: 477 VRVYAVMIKHFGKCGRFNEAMGLFNEMKKL-----GCIPDVYAYNALITGMVRADMMDEA 531
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ + GC P ++ I+N R G +A ++F +M+ V+Y++++
Sbjct: 532 FSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGC 591
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+ G +A +L+ +M KG E ++ Y+S+++ G+ R +
Sbjct: 592 LSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKVDEDRNM 636
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 113/232 (48%), Gaps = 3/232 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S+T+M I C L ++ E+ + +DM + PS + ++ + V A +
Sbjct: 125 STTYMALIRC--LDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSI 182
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFS 176
F + + + + ++LM ++EG EK E+ M + D ++ +++ F
Sbjct: 183 FYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFG 242
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K +AV++++++ G P Y +++ Y ++G +A + EM+ + V
Sbjct: 243 KLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVY 302
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
Y+ ++ GK+GR+ DA + M GC+P+V + N+L+++ GR+ L++
Sbjct: 303 TYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKE 354
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 9/198 (4%)
Query: 110 EVKVAEELFKEA-EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
EV V + FK A +++ D ++ L+ E +V + ++ M + I
Sbjct: 104 EVHVKIQFFKWAGKKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSEL 163
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
IV + + A+ ++ Q+ + C P TY S+I + G + K +++ EM
Sbjct: 164 SEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCS 223
Query: 229 KGFDKC---VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+G C V YS++++ +GK R A+RL +MK G +P IY +LM ++ +
Sbjct: 224 EG--HCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFK--- 278
Query: 286 LRQLEKYTTVISAYNMAR 303
L ++E+ ++ M R
Sbjct: 279 LGKVEEALNLVHEMRMRR 296
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M + G+ ++ Y ++ + + G+ +F + K+++ P + Y L L
Sbjct: 456 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT--KVNVLPD-LYCYNSLIFGL 512
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR E K+F M+E+G+L + Y+ LI + +++ AE+L + + G+ +
Sbjct: 513 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 572
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+++ L+ Y + +EK +SM + + + + I ++++ S AA +V
Sbjct: 573 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 632
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G +P Y+S+I+ C+ KA + EM +KG D +V Y++++ K+G
Sbjct: 633 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 692
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
I A + + KG PN Y SL+D
Sbjct: 693 ISYARNVFNSILAKGLVPNCVTYTSLID 720
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 134/290 (46%), Gaps = 8/290 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYKIL 66
Y+ +M+ G++ + Y ++ + K GD E L R LD L P+ +Y L
Sbjct: 524 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV----QRMLDTGLKPNDV-IYIDL 578
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+S KS ++ F+ M ++G++ D +Y LI + +S ++ A + E+ G
Sbjct: 579 LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGS 638
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ V+ L+ + EK +++ M ++ + +++G K A
Sbjct: 639 VPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARN 698
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+ ++++G +P VTY S+I+ C++G S A ++ EM G YS +
Sbjct: 699 VFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCS 758
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
G + AM L+ +M +G ++ +N+L+D + +++ K VI
Sbjct: 759 SAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVI 807
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 124/279 (44%), Gaps = 9/279 (3%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKIL 66
+ + M+ G+V D Y ++ K S + AL + C K ++ +Y L
Sbjct: 279 FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV-----VYANL 333
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D + G A E K ++M G+ + Y +L+ + ++ A L K+
Sbjct: 334 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 393
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + ++ + + ++ M+NA ++ + ++++G + A
Sbjct: 394 RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 453
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ E++ ++G P YA +I+ YCR G S A ++F +M + + Y+S++
Sbjct: 454 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 513
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
K GR+ ++ + A+M+ +G PN + Y+ L +HG KN
Sbjct: 514 KVGRVEESTKYFAQMQERGLLPNEFTYSGL--IHGYLKN 550
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 3/264 (1%)
Query: 23 GCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKF 82
G + +EA+ K+ + + + +E R L +T Y +L L +SG E F
Sbjct: 223 GRHGSALEAYCKVREFDTAKKVLVEMRERGCGL---NTVTYNVLIAGLCRSGAVEEAFGF 279
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
+DM++ G++ D Y +LI A+ L E + ++ V+ L+ ++
Sbjct: 280 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 339
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
EG ++ ++++ M A + + +V G K A + +Q++ P +T
Sbjct: 340 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 399
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y II + R A ++ EM+ G V YS M+ ++G A L+ +M
Sbjct: 400 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 459
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNL 286
KG +PN ++Y L+ + R N+
Sbjct: 460 TKGLKPNAFVYAPLISGYCREGNV 483
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 122/298 (40%), Gaps = 28/298 (9%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N ++ ++ G V D Y ++ K D EK + E + +D +
Sbjct: 622 NMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD---PNIV 678
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D L KSG F + KG++ + Y SLI + ++ A L+ E
Sbjct: 679 CYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEM 738
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRA 180
G+ D V+ L G +E+ + ++E M +IS + +V+GF KR
Sbjct: 739 LATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNN--LVDGFCKRGK 796
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+K+ ++ +G +P +T +II+ G S+ +F+E+QQK + +SS
Sbjct: 797 MQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSS 856
Query: 241 ------------------MVAMYGKTGRIRDAMRL----VAKMKPKGCEPNVWIYNSL 276
M+ + K G + A+ L VAK P GC + I ++L
Sbjct: 857 LFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNL 914
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 132/278 (47%), Gaps = 16/278 (5%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+T+ Y L SL ++ R E FR M +G + Y+ LI +V A EL
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E + G ++ + L+ + G +++ +++ M + V+++GFSK
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A +++E+++ +GCIP TY S+++ + R G + + + +F +M ++G +
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLE 290
+++++ + K G + +A RL +M+ GC P+V YN+LM H + LR++
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMI 289
Query: 291 K---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ Y +I Y+ + D +K + E +G
Sbjct: 290 RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 38/259 (14%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ K+G ++ LF R P +Y +L D K G E + F
Sbjct: 125 YGSLLSGLCKMGKLKEAVDLFSRMVYRG---CPPDGVVYNVLIDGFSKKGDMGEAYRLFE 181
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M EKG + Y SL+ F+ E + LFK+ +G + ++ F L+
Sbjct: 182 EMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL------- 234
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+GF K A +++ ++ S GC P V+Y
Sbjct: 235 ----------------------------DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYN 266
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+++ C G +A+++ EM + G +V+Y+ ++ Y K+G + A++L ++
Sbjct: 267 TLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS 326
Query: 265 GCEPNVWIYNSLMDMHGRA 283
G EP+ + Y++++D RA
Sbjct: 327 GLEPDAFSYSTIIDCLCRA 345
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%)
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
Y ++ GC+P TY ++ + C+ + +A VF M +G V +YS ++A
Sbjct: 39 TYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLC 98
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ ++ +A L+ +M G +PNV Y SL+
Sbjct: 99 RGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 87/222 (39%), Gaps = 3/222 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M G V + + +++ F K+GD + LFLE S P Y L
Sbjct: 215 FKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG---CPPDVVSYNTLMRG 271
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G+ E + R+M G+ D Y LI ++ + A +LF E + G+ D
Sbjct: 272 MCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPD 331
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ G V V + M + +V G + + ++++
Sbjct: 332 AFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQ 391
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ C+P Y ++ C+ ++F E+ ++GF
Sbjct: 392 AMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGF 433
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 134/271 (49%), Gaps = 7/271 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++++K+ G + D+ Y ++ K G + + LF + + L T Y + D
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVL---DTRAYNTVIDG 628
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGML 127
KSG+ + + +MK KG +P+V Y S+I A I + A LF+EA+ KG+
Sbjct: 629 FCKSGKVNKAYQLLEEMKTKG--HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIE 686
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ ++ L+ + + G +++ ++E + L + +++ K A+
Sbjct: 687 LNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVC 746
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ + C P +TY+ +I+ C+I ++KA + EMQ++GF V Y++M++ K
Sbjct: 747 FQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAK 806
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G I +A L K K KG + IYN++++
Sbjct: 807 AGNIVEADTLFEKFKEKGGVADSAIYNAIIE 837
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
PS+ +I+ S KS + E F + M++ S Y +LI + ++ +
Sbjct: 163 PSNNTCIEIVL-SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLT 221
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF++ +E G ++ +F L+ ++ EG V+ L +++ MK+ L + V ++ F
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A K + ++ + G + VTY S+I C+ ++A ++F M Q C
Sbjct: 282 KAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
AY++M+ YG G+ DA L+ + + KGC P+V YN ++ GR
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 23/317 (7%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLT--PSSTHMYKILCDSLGKSGRAFE 78
D+ YC ++E + G ++ L+ + LD P++ +Y L + K GR +
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLY----EQMLDANQIPNAV-VYTSLIRNFFKCGRKED 532
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
K + +M G D + + + E++ LF+E + G + D + L+
Sbjct: 533 GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIH 592
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
++ G + E+ +MK + +++GF K A ++ E++ ++G P
Sbjct: 593 GLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEP 652
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
VTY S+I+ +I +A +F E + KG + VV YSS++ +GK GRI +A ++
Sbjct: 653 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIM 712
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRA-------------KNLRQLEKYTT---VISAYNMA 302
++ KG PNV+ +N L+D +A K+L+ Y T +I
Sbjct: 713 EELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKI 772
Query: 303 REFDMCVKFYNEFRMNG 319
R+F+ F+ E + G
Sbjct: 773 RKFNKAFVFWQEMQKQG 789
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 8/271 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MK+ G+VLD Y ++ K + LF + K + Y +
Sbjct: 293 FHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK---QVPCAYAYNTMIMG 349
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE--KGML 127
G +G+ + + KG + PSV S C + + +E K+ EE K +
Sbjct: 350 YGMAGKFEDAYSLLERQRRKGCI--PSV-VSYNCILSCLGRKGQVDEALKKFEEMKKDAI 406
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+L + ++ M + G +E L V ++MK+A L + ++V+ K + A +
Sbjct: 407 PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSI 466
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+E L + C P VTY S+I R G +A K++ +M V Y+S++ + K
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR D ++ +M GC P++ + N+ MD
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPDLLLLNTYMD 557
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 131/340 (38%), Gaps = 29/340 (8%)
Query: 19 VLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE 78
V+DS CQI+E G S +E +LDL P+ + +L L A
Sbjct: 67 VIDS--VCQILET-GPWGSS-------VENRLAELDLNPNPELVIGVL-RRLKDVNNAVN 115
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
++ + ++ + Y SL+ A + E++ +E G +++VL
Sbjct: 116 YFRWAERLTDRAHCRE--AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVL 173
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
+I+ + + +++M+ + + ++ S R + +++Q+ G
Sbjct: 174 SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAV 233
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
+ ++I + R G A + EM+ + VV Y+ + +GK G++ A +
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXF 293
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMA 302
+MK G + Y S++ + +A L + + Y T+I Y MA
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMA 353
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+F+ R G + ++ + Q++E
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDE 393
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 125/275 (45%), Gaps = 3/275 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L Y ++M G+ + Y ++ A + G + L E + L Y
Sbjct: 161 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL---APDVFTY 217
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL + K G + L+ F +M +G+ Y SLI + + +V+ ++LF EA
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ DL ++ L+ + G +++ E++ M+ + D ++ G
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K+ +++ +G P VTY ++I+ Y G A ++ EM KGF+ ++ Y++++
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 397
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G+ DA +V +M G P+ Y SL++
Sbjct: 398 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 432
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 23/318 (7%)
Query: 4 QSKLHYYEKMKS-AGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
Q+ L +M+ GI + Y ++ + K+G ++ +F E + K ++ P + M
Sbjct: 89 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKPEAV-M 146
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L G+ L + M E+G+ + Y L+ + A EL +E
Sbjct: 147 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 206
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + L+ + +EG V+K LE+ E+M + + ++ SK+
Sbjct: 207 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQ 266
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
K++++ + +G P V Y ++IN++ G +A ++ EM++K V Y++++
Sbjct: 267 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 326
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
GR+ +A +L+ +M +G +P++ YN+L IS Y+M
Sbjct: 327 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTL-------------------ISGYSMK 367
Query: 303 REFDMCVKFYNEFRMNGG 320
+ ++ NE MN G
Sbjct: 368 GDVKDALRIRNEM-MNKG 384
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 136/305 (44%), Gaps = 36/305 (11%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDL-TPSSTHMYKILCDSLG 71
MKS + + + ++ A S ALF + +L L T + M + LC S G
Sbjct: 1 MKSLSLPISTASLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLC-SAG 55
Query: 72 KSGRAFEILK----------------------------FFRDMKEKG-ILEDPSVYASLI 102
K RA E+L+ R+M+E+G I + Y ++I
Sbjct: 56 KPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVI 115
Query: 103 CSFASIAEVKVAEELFKEAEEKGMLRDLEV-FLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
+ + V A ++F E KG ++ V + L+ Y ++G ++ L + M +
Sbjct: 116 SGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGV 175
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
++ ++V+ A ++ E++ +G P TY +IN +C+ G KA +
Sbjct: 176 AMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALE 235
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+F M ++G VV Y+S++ K G++++ +L + +G P++ +YN+L++ H
Sbjct: 236 IFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 295
Query: 282 RAKNL 286
+ N+
Sbjct: 296 TSGNI 300
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 3/259 (1%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+++A ++ GD + AL +R L Y + L K R + + FR M
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANRGLK---PGIVTYNSVLKGLCKHRRFDKAKEVFRTMD 254
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+ + D + LI F + EVK A + +KE + + + D+ F L+ ++ G ++
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMD 314
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ MK L I +++ GF + + A++V ++++ GC+P VTY +++
Sbjct: 315 HAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLL 374
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N C+ AEK+ EM+++G + +++++ Y + G +A++L + +
Sbjct: 375 NGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLR 434
Query: 268 PNVWIYNSLMDMHGRAKNL 286
P+V YNSL+D R +L
Sbjct: 435 PDVVTYNSLIDGMCRKGDL 453
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 137/302 (45%), Gaps = 12/302 (3%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+Y++M+ + D + ++ F + G+ + A E + L L P +Y ++
Sbjct: 284 FYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKG--LGLVPDGV-IYTMVIG 340
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
++G E L+ +M G L D Y +L+ + AE+L E EE+G+
Sbjct: 341 GFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTP 400
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
DL F L+ Y +G E L++ +++ L +++G ++ A +++
Sbjct: 401 DLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELW 460
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ + ++ +P +TY+ +I+++C G A EM +KG + Y+S++ Y ++
Sbjct: 461 DDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRS 520
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLEKYTTVISA--Y 299
G ++ + + KM+ P++ +N+L+ +MHG +EK A Y
Sbjct: 521 GNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTY 580
Query: 300 NM 301
NM
Sbjct: 581 NM 582
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 128/315 (40%), Gaps = 38/315 (12%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y +MK G+V D Y ++ F + G + AL + E P Y L +
Sbjct: 319 YLREMKGLGLVPDGVIYTMVIGGFCRAGSMSE--ALRVRDEMVGFGCLPDVV-TYNTLLN 375
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K R + K +M+E+G+ D + +LI + + A +LF + +
Sbjct: 376 GLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRP 435
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ +G + K E+ + M E+ + ++++ ++ A
Sbjct: 436 DVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFL 495
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG-------FDKCV------ 235
++++ +G +P TY SII YCR G K ++ +M+Q F+ +
Sbjct: 496 DEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKE 555
Query: 236 ----------------------VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
V Y+ ++ + + G ++DA R+ M G EP+ + Y
Sbjct: 556 ENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTY 615
Query: 274 NSLMDMHGRAKNLRQ 288
SL++ H A N +Q
Sbjct: 616 MSLINGHVTAGNSKQ 630
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 3/230 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N ++ L ++ + + D Y +++ + GD K L+ + +R ++ P+
Sbjct: 417 NFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAR--EILPNHI- 473
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL DS + G+ + F +M +KG L + Y S+I + VK ++ ++
Sbjct: 474 TYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ + DL F L+ YI+E + V M+ + +I+NGFS++
Sbjct: 534 RQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNM 593
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A +V++ + G P + TY S+IN + G +A ++ EM +GF
Sbjct: 594 QDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGF 643
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 5/260 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M+ G+ D + ++ + + G+ E LF ++L P Y L D +
Sbjct: 391 NEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRL--RPDVV-TYNSLIDGM 447
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G + + + DM + IL + Y+ LI S +V+ A E +KG L ++
Sbjct: 448 CRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNI 507
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
+ ++ Y G V+K + ++ M+ + D I+ +++G+ K A V+
Sbjct: 508 RTYNSIIKGYCRSGNVKKGQQFLQKMRQDNV-FPDLITFNTLIHGYIKEENMHGAFNVFN 566
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + P VTY IIN + G A +VF M G + Y S++ + G
Sbjct: 567 IMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAG 626
Query: 250 RIRDAMRLVAKMKPKGCEPN 269
+ A +L +M +G P+
Sbjct: 627 NSKQAFQLHDEMIHRGFAPD 646
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 108/236 (45%), Gaps = 3/236 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ +L D+ ++G + M +G+ Y S++ A+E+F+ +
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMD 254
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ + D+ F L+ + G V++ ++ + M++ + D +S + G RR
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVT-PDVVSFSCLIGLFSRRGEM 313
Query: 183 AAVKVY-EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
Y ++ G +P V Y +I +CR G S+A +V EM G VV Y+++
Sbjct: 314 DHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTL 373
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKYTTVI 296
+ K R+ DA +L+ +M+ +G P++ + +L+ + R N L+ + T++
Sbjct: 374 LNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLL 429
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 86/188 (45%)
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
++ S+ E A+ + E E++ + D+ L+ G V+ + +V+SM N
Sbjct: 163 MVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRG 222
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
L ++ G K R + A +V+ + P ++ +I +CR+G +A
Sbjct: 223 LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAV 282
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
K + EMQ + VV++S ++ ++ + G + A + +MK G P+ IY ++
Sbjct: 283 KFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGF 342
Query: 281 GRAKNLRQ 288
RA ++ +
Sbjct: 343 CRAGSMSE 350
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 94/233 (40%), Gaps = 26/233 (11%)
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA--AVKVY 188
+VF L+ Y + + E + + + + S ++ S RA W A + Y
Sbjct: 88 QVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLS--RAGWPHLAQEAY 145
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++S T ++++YC+ + A+ V EM+++ VV ++ ++ +
Sbjct: 146 RLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRA 205
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSL-------------------MDMHGRAKNLRQL 289
G + A+ LV M +G +P + YNS+ MD A ++R
Sbjct: 206 GDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS- 264
Query: 290 EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +I + E VKFY E + D ++G+FS+ +++
Sbjct: 265 --FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDH 315
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 138/288 (47%), Gaps = 10/288 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL-DLTPSSTHMYKI 65
L ++KM +G D Y ++ A K + + +E R L ++ + Y +
Sbjct: 29 LELFDKMTRSGFQGDILLYGYLINALRKTRQARRA----VELHRRMLSEICSGNFFTYGL 84
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+ DSL K G A + LK FR+M GI + VY+SLI + +++ A LF E +G
Sbjct: 85 VIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQG 144
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAA 184
+ ++ + L+ G+ ++ M E + D ++ +++ SK+ A
Sbjct: 145 IKANVITYNSLIHASCRFGLWKEATRTFSQMV-GEGILPDVVTFTTLIDHLSKKGKVQEA 203
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
K++E +I QG P VTY S++N C A ++F M ++G V++Y++++
Sbjct: 204 YKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLING 263
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
Y +G+ +AM L KM+ + P++ Y L+ +GR + ++L
Sbjct: 264 YCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKEL 311
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 117/219 (53%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + SG+ E + FR M+ + + + Y L+ + ++ A+ELF +
Sbjct: 257 YNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQ 316
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G L+ + L+ + G +E+ ++V S+K+ + S I +++ G + R +
Sbjct: 317 ICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWE 376
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+A+++++++ + G +P VTY +IN C+ G +AE++F++M++ G ++ ++++ ++
Sbjct: 377 SAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFII 436
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ + +++ AM + +M+ K PN + L++++
Sbjct: 437 RGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYA 475
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 103/205 (50%)
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+ + L+ F M G D +Y LI + + + A EL + + + +
Sbjct: 23 GKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTY 82
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ ++G+ K L++ M N + + + ++NG + AV ++++++S
Sbjct: 83 GLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVS 142
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
QG +TY S+I+A CR GL+ +A + F +M +G VV +++++ K G++++
Sbjct: 143 QGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQE 202
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMD 278
A ++ M +G PN+ YNSL++
Sbjct: 203 AYKIFELMIKQGEAPNIVTYNSLLN 227
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%)
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
EG V LE+ + M + + ++N K R AV+++ +++S+ C T
Sbjct: 22 EGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFT 81
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y +I++ C+ GL K K+F EM G V+ YSS++ + G++R+A+ L +M
Sbjct: 82 YGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMV 141
Query: 263 PKGCEPNVWIYNSLM 277
+G + NV YNSL+
Sbjct: 142 SQGIKANVITYNSLI 156
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 114/272 (41%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ +++M S GI + Y ++ A + G ++ F + + P + L
Sbjct: 134 VNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGE--GILPDVV-TFTTL 190
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K G+ E K F M ++G + Y SL+ ++ A LF+ E+G+
Sbjct: 191 IDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGI 250
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ Y G E+ + + M+ EL S +++ + A +
Sbjct: 251 KIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKE 310
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ + G P TY +++ C+ G +A VF ++ + + YS ++
Sbjct: 311 LFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMF 370
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ R AM + ++ G PN+ YN +++
Sbjct: 371 QARRWESAMEIFDEIPTVGLVPNIVTYNIMIN 402
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M+ G Y +++ K G E+ +F +S K S +Y IL
Sbjct: 312 FNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYK---PSIRIYSILIGG 368
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ ++ R ++ F ++ G++ + Y +I ++ AE LF + EE G +D
Sbjct: 369 MFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQD 428
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
F ++ +++E V+K +E ++ M+ + +D ++ ++VN ++
Sbjct: 429 EISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYA 475
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L K+G+ + + +M+++GI +V+ +I A FK
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVA 92
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
D+ F LV ++ G VE+ ++ ESM + + + ++ ++NG K
Sbjct: 93 GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++ + + GC P +TY+ ++ C+ G K + EM ++GF V+ Y+++
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+ K+ R+ +A+ LV M GC P V YNSLM++ R+K + + + V+S
Sbjct: 213 LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 3/226 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKG-ILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ IL D+L KSGR E + F M L + Y ++I ++ A EL
Sbjct: 103 FNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLM 162
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G ++ + LV + G +K +++ M + ++NG K R
Sbjct: 163 NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRL 222
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++ + +I GC P VTY S++ +CR +A ++ M ++G V+ Y+++
Sbjct: 223 DEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTV 282
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+A + R+ DA L+ +M C P+V Y++++D G K+ R
Sbjct: 283 IAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIID--GLCKDWR 326
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ AV+++ + + C+P + TY S+I+ C+ G +A ++ EM+ +G V ++
Sbjct: 14 HGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNG 70
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-----------------MHGRA 283
++ K GR DA+ + C P++ +N L+D MH +
Sbjct: 71 VIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSS 130
Query: 284 KNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ L + YTTVI+ + D ++ + G
Sbjct: 131 QCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETG 166
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 114/262 (43%), Gaps = 12/262 (4%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAF---YKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
++M +A V D Y I++ +++ K+ A E K P + Y ++
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ L ++ ++ + L R M + ++ D S ++ +I S ++ A ++F E+
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEV----VESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + L+ + G V+K + V VES + + +++G
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNS-----VLDGLCGVGRIEE 474
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV++ E +I + C P +Y ++I CR+ +A ++F ++ KGF V Y+ +V
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVN 534
Query: 244 MYGKTGRIRDAMRLVAKMKPKG 265
K R+ DA + K+ G
Sbjct: 535 ELCKKKRLSDAHGVANKLIEAG 556
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 133/321 (41%), Gaps = 32/321 (9%)
Query: 11 EKMKSAGIVLDSGCYCQI------MEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
E ++ +++ SGCY + ME F + S++V F + P Y
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCR---SKQVDRAFRLIQVMSERGCPPDVINYN 280
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV------KVAEELF 118
+ L + R + + M + D Y+++I V + A E+
Sbjct: 281 TVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEIL 340
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSK 177
+ ++ G + + ++ ++ L ++ M ++E+ + D S +++ K
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEV-VPDLSSFSMVIGSLCK 399
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
AA K++ + + C P V YA++I+ + G KA +VF E+ + F V
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVAT 458
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
Y+S++ GRI +A+R+V M K C P+ Y +L +R L + + V
Sbjct: 459 YNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGAL---------IRGLCRVSCVEE 509
Query: 298 AYNM-----AREFDMCVKFYN 313
AY + A+ F M V YN
Sbjct: 510 AYELFQAVEAKGFAMEVGVYN 530
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 23/243 (9%)
Query: 63 YKILCDSLGKSGR---------AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
Y + D L K R A EIL+ MK+ G + YA +I + +
Sbjct: 314 YSTIIDGLCKDWRVDADWKLEAACEILEM---MKQTGCPPNAGTYAVVIEGLCRARKSQQ 370
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A L + + ++ DL F ++ + ++ ++ M E + +++
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G SK AV+V+E L+ + PG TY S+++ C +G +A ++ M K
Sbjct: 431 GLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFP 489
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM----------DMHGRA 283
+Y +++ + + +A L ++ KG V +YN L+ D HG A
Sbjct: 490 DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVA 549
Query: 284 KNL 286
L
Sbjct: 550 NKL 552
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 134/271 (49%), Gaps = 7/271 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++++K+ G + D+ Y ++ K G + + LF + + L T Y + D
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVL---DTRAYNTVIDG 628
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGML 127
KSG+ + + +MK KG +P+V Y S+I A I + A LF+EA+ KG+
Sbjct: 629 FCKSGKVNKAYQLLEEMKTKG--HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIE 686
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ ++ L+ + + G +++ ++E + L + +++ K A+
Sbjct: 687 LNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVC 746
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ + C P +TY+ +I+ C+I ++KA + EMQ++GF V Y++M++ K
Sbjct: 747 FQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAK 806
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G I +A L K K KG + IYN++++
Sbjct: 807 AGNIVEADTLFEKFKEKGGVADSAIYNAIIE 837
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
PS+ +I+ S KS + E F + M++ S Y +LI + ++ +
Sbjct: 163 PSNNTCIEIVL-SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLT 221
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF++ +E G ++ +F L+ ++ EG V+ L +++ MK+ L + V ++ F
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A K + ++ + G + VTY S+I C+ ++A ++F M Q C
Sbjct: 282 KAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
AY++M+ YG G+ DA L+ + + KGC P+V YN ++ GR
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 23/317 (7%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLT--PSSTHMYKILCDSLGKSGRAFE 78
D+ YC ++E + G ++ L+ + LD P++ +Y L + K GR +
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLY----EQMLDANQIPNAV-VYTSLIRNFFKCGRKED 532
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
K + +M G D + + + E++ LF+E + G + D + L+
Sbjct: 533 GHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIH 592
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
++ G + E+ +MK + +++GF K A ++ E++ ++G P
Sbjct: 593 GLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEP 652
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
VTY S+I+ +I +A +F E + KG + VV YSS++ +GK GRI +A ++
Sbjct: 653 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIM 712
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRA-------------KNLRQLEKYTT---VISAYNMA 302
++ KG PNV+ +N L+D +A K+L+ Y T +I
Sbjct: 713 EELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKI 772
Query: 303 REFDMCVKFYNEFRMNG 319
R+F+ F+ E + G
Sbjct: 773 RKFNKAFVFWQEMQKQG 789
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 8/272 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ +MK+ G+VLD Y ++ K + LF + K + Y +
Sbjct: 292 FFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK---QVPCAYAYNTMIM 348
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE--KGM 126
G +G+ + + KG + PSV S C + + +E K+ EE K
Sbjct: 349 GYGMAGKFEDAYSLLERQRRKGCI--PSV-VSYNCILSCLGRKGQVDEALKKFEEMKKDA 405
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ +L + ++ M + G +E L V ++MK+A L + ++V+ K + A
Sbjct: 406 IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACS 465
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++E L + C P VTY S+I R G +A K++ +M V Y+S++ +
Sbjct: 466 IFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFF 525
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K GR D ++ +M GC P++ + N+ MD
Sbjct: 526 KCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMD 557
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 131/340 (38%), Gaps = 29/340 (8%)
Query: 19 VLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE 78
V+DS CQI+E G S +E +LDL P+ + +L L A
Sbjct: 67 VIDS--VCQILET-GPWGSS-------VENRLAELDLNPNPELVIGVL-RRLKDVNNAVN 115
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
++ + ++ + Y SL+ A + E++ +E G +++VL
Sbjct: 116 YFRWAERLTDRAHCRE--AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVL 173
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
+I+ + + +++M+ + + ++ S R + +++Q+ G
Sbjct: 174 SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAV 233
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
+ ++I + R G A + EM+ + VV Y+ + +GK G++ A +
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFF 293
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMA 302
+MK G + Y S++ + +A L + + Y T+I Y MA
Sbjct: 294 HEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMA 353
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+F+ R G + ++ + Q++E
Sbjct: 354 GKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDE 393
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 4/210 (1%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR-D 129
G G A+E+LK +M G+ ++ ++ +I S ++ A ELFKE EE G D
Sbjct: 891 GDIGTAYELLK---EMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPD 947
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + +V ++ G V+ +VE M + + + +++G K A + +
Sbjct: 948 VFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQ 1007
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ GC P VTY +II+ +C++G +A + EM G VV Y+ ++ + K G
Sbjct: 1008 RMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 1067
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ DA+ LV M KG PN++ YNSL+DM
Sbjct: 1068 KAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 1097
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 48 CESRKLDLT-------------PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
C +RKLD P Y + DSL KSG+ + + DM KG +
Sbjct: 923 CSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPN 982
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y+SL+ ++ A L + G ++ + ++ + + G +++ ++E
Sbjct: 983 VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE 1042
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M + + V+++ F K A+ + E ++ +G +P TY S+++ +C+
Sbjct: 1043 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 1102
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A ++ M QKG VV+Y++++A K ++ + + L+ +M C P++ +N
Sbjct: 1103 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 1162
Query: 275 SLMD 278
+++D
Sbjct: 1163 TIID 1166
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 126/282 (44%), Gaps = 5/282 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M G D C +++A K + L S +D P Y IL +L
Sbjct: 429 EQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRM--SIGMDCAPDVV-AYSILIHAL 485
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+ R E + M + D Y S++ + A LF G++ D+
Sbjct: 486 CKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDV 545
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
+ ++ + ++ ++ +++E MK A+ + D ++ ++NG K A V++
Sbjct: 546 VTYSIVIHSFCKDNNLDSAFKMLERMKEAKC-VPDVVTYSALINGLCKAGTVDKAFDVFQ 604
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ GC P VTY ++I+ C+I +A ++ M+++ + Y+ ++
Sbjct: 605 EMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNAS 664
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
R+ +A R++ +MK KGC P+ Y +L+ + NL +E+
Sbjct: 665 RLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQ 706
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 126/299 (42%), Gaps = 17/299 (5%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
T Y L ++G+ + F +M KG+ V+ S++ + A F
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHF 219
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E K D + ++ + ++ + ++E M + + +++GF K
Sbjct: 220 REMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKA 278
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A+ + EQ++++GC P V+Y ++IN C++ +A +V +M Q+G V+ Y
Sbjct: 279 NRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITY 338
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------- 291
++V + + G + A+ LV KM +G PN YN++M + R ++ + +
Sbjct: 339 GTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ 398
Query: 292 ---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
Y+T+IS + A + + G D A ++ K + I+
Sbjct: 399 TGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAID 457
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 120/287 (41%), Gaps = 17/287 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + L K+ + E + M + D + ++I + V +A ELF +
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 1185
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
E G +L + LV + ++ ++ M + D I+ +++G K +
Sbjct: 1186 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 1245
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K++ Q++S G P VTY+ +I++ C+ +A V M + GFD + Y ++
Sbjct: 1246 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL 1305
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----LE------- 290
+ + KTG + A+ ++ + KG P+V ++ +D + LRQ LE
Sbjct: 1306 IDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 1365
Query: 291 -----KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
Y T++ + A + V + R G D A +VG
Sbjct: 1366 VPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVG 1412
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 117/295 (39%), Gaps = 16/295 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + K+ R L M +G D Y ++I + +V A + +
Sbjct: 268 YNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI 327
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G ++ + LV + G ++ +E+V M + I++ F +R
Sbjct: 328 QRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDME 387
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +V + +I GC P + Y++II+ +C+ G +A + +M ++G V S+++
Sbjct: 388 RAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLI 447
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------- 291
K I A L+ C P+V Y+ L+ +AK L + E
Sbjct: 448 DALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCY 507
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
Y +V+ +R + ++ R G + D I++ F K + ++
Sbjct: 508 PDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLD 562
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F L+ G + E+++ M + + + V++ G R +A+++++++
Sbjct: 879 TFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEM 938
Query: 192 ISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
G C P TY++I+++ + G A ++ +M KG VV YSS++ K G+
Sbjct: 939 EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGK 998
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ +A L+ +M GC PN+ YN+++D H
Sbjct: 999 LDEATALLQRMTRSGCSPNIVTYNTIIDGH 1028
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 11/216 (5%)
Query: 50 SRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA---SLICSFA 106
+RK +P Y + D L KS R K F M G+ D Y+ S +C +
Sbjct: 1220 TRKQGCSPDII-TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 1278
Query: 107 SIAEVK-VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD 165
+ E V E + K + G + + L+ + + G ++K LE+++ + ++ + D
Sbjct: 1279 FMDEANNVLELMLKNGFDPGAI----TYGTLIDGFCKTGNLDKALEILQLLL-SKGSYPD 1333
Query: 166 CIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI 224
++ + ++ SKR A ++ E ++ G +P VTY +++ +C L A +F
Sbjct: 1334 VVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFE 1393
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
M+Q G + Y+++V +D + V+K
Sbjct: 1394 VMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSK 1429
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 40/137 (29%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV------- 236
A++VY + C P T+ +I+ CR G A ++ EM + G + V+
Sbjct: 863 ALQVYRNKLC--CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIK 920
Query: 237 -----------------------------AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
YS++V K+G++ DA RLV M KGC
Sbjct: 921 GLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCS 980
Query: 268 PNVWIYNSLMDMHGRAK 284
PNV Y+SL +HG K
Sbjct: 981 PNVVTYSSL--LHGLCK 995
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 117/298 (39%), Gaps = 66/298 (22%)
Query: 106 ASIAEVKVAEELFKEAEEKGMLR----------DLEVFLKLVLMYIEEGMVEKTLEVVES 155
S + + V E + + A ++ LR E+ K++ I+ G E E+
Sbjct: 59 GSDSPISVLERIVQGASDEQALRVALDEYRGQLSPEIVGKVLQRLIDPGAALVFFEWAET 118
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
+ I C +C++ N K Y A ++ I VTY+++I+ + R G
Sbjct: 119 RDGYQHEIF-CCNCLL-NVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGK 176
Query: 216 YSKAEKVFIEMQQKGFD-----------------KC-----------------VVAYSSM 241
A ++F EM +KG +C V Y++M
Sbjct: 177 ILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTM 236
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG-----RAKN-LRQLEK---- 291
+ K+ R+ DA+RL+ +M G PNV+ YN++ +HG R +N L LE+
Sbjct: 237 INGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTV--LHGFCKANRVENALWLLEQMVTR 294
Query: 292 --------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
YTTVI+ + D + ++ G + G +V F ++ ++
Sbjct: 295 GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 352
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 105/215 (48%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + DSL K+ R + L FF+++ KGI + Y +L+ + A L ++
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++ + ++ + L+ +++ G V + E+ E M ++ ++NG
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++ ++S+GC P V+Y ++IN +C+ K+F +M Q+G V Y++++
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLI 372
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ + G + A ++M G P++W YN L+
Sbjct: 373 QGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILL 407
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++++ GI + Y ++ G A L + RK+ TP+ Y L
Sbjct: 210 LDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKI--TPNVIT-YSAL 266
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K+G+ E + F +M I D Y+SLI + A ++F KG
Sbjct: 267 LDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ + + VE +++ M L + ++ GF + A +
Sbjct: 327 FPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQE 386
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ Q+ S G P TY ++ C GL KA +F +MQ+ D +V Y++++
Sbjct: 387 FFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMC 446
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
KTG++ DA L + KG +P++ Y ++M
Sbjct: 447 KTGKVEDAWGLFCSLSLKGLKPDIVTYTTMM 477
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K+ R + +K FR M ++G++ + Y +LI F + +V A+E F + +
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMD 392
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ + L+ + G++EK L + E M+ +E+++ ++ G K
Sbjct: 393 SFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVE 452
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ L +G P VTY ++++ C GL + E ++ +M+Q+G K SM+
Sbjct: 453 DAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMK----NDSML 508
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ G I + L+ KM G P++
Sbjct: 509 CL--GDGDITISAELIKKMLSCGYAPSL 534
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 121/276 (43%), Gaps = 6/276 (2%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + + R + + M E G D Y ++I S V A + FKE KG
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKG 220
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ ++ + LV G ++ M ++ + +++ F K A
Sbjct: 221 IRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+++E+++ P VTY+S+IN C +A ++F M KG VV+Y++++ +
Sbjct: 281 EIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGF 340
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREF 305
K R+ D M+L KM +G N YN+L+ + ++ + +++ + + ++ ++ +
Sbjct: 341 CKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPD- 399
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ YN GG+ D + + +F + + E
Sbjct: 400 ---IWTYNILL--GGLCDNGLLEKALVIFEDMQKSE 430
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 113/263 (42%), Gaps = 16/263 (6%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M + G D SL+ F V A L + E G D+ + ++ +
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRR 205
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
V L+ + + + + +VNG + A ++ +I + P +TY++
Sbjct: 206 VNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSA 265
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+++A+ + G +A+++F EM + D +V YSS++ RI +A ++ M KG
Sbjct: 266 LLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 266 CEPNVWIYNSLMDMHGRAKNL-------RQLEK---------YTTVISAYNMAREFDMCV 309
C P+V YN+L++ +AK + R++ + Y T+I + + D
Sbjct: 326 CFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQ 385
Query: 310 KFYNEFRMNGGVIDRAMAGIMVG 332
+F+++ G D I++G
Sbjct: 386 EFFSQMDSFGVSPDIWTYNILLG 408
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 58/109 (53%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N F A+ V +++ G P +VT S++N +CR S A + +M +
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G+ +VAY++++ KT R+ DA+ ++ KG PNV Y +L++
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVN 233
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
T+ +IN +C S A V +M + G++ V S+V + + R+ DA+ LV KM
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 262 KPKGCEPNVWIYNSLMD 278
G P++ YN+++D
Sbjct: 182 VEIGYRPDIVAYNAIID 198
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 132/268 (49%), Gaps = 14/268 (5%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAF-E 78
LD + I+ A+ +IG E+ +F + RK L+P+ Y ++ D GK GR++ +
Sbjct: 207 LDVRAWTTILHAYSRIGKYERAITMFEKM--RKTGLSPTLV-TYNVMLDVYGKMGRSWNK 263
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
IL +M+ G+ D +++I + + A + F + +G + + L+
Sbjct: 264 ILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQ 323
Query: 139 MYIEEGMVEKTLEVVESMKNAE-----LNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ + G+ + L +++ M+ + ++ ++ + GF + A + +I
Sbjct: 324 VFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGA-----DFIDTMIR 378
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G +P +TY ++INAY + G KA F +M++ G V Y++++ M GK R+ +
Sbjct: 379 KGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEE 438
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ ++ M+ GC PN +N+++ M G
Sbjct: 439 MIDMLCDMRSNGCAPNSVTWNTMLAMCG 466
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 132/306 (43%), Gaps = 10/306 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDS-EKVAALFLECESRKLDLTPSSTHMYKILCD 68
+EKM+ G+ Y +++ + K+G S K+ L E S L+ + C
Sbjct: 232 FEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISAC- 290
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G+ G E KFF +K +G + Y SL+ F A + KE E+
Sbjct: 291 --GREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPP 348
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
DL + +LV Y+ G E+ + +++M + + ++N + K A+ +
Sbjct: 349 DLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFF 408
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
Q+ GC+P TY +I+ + + + +M+ G V +++M+AM G
Sbjct: 409 RQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNK 468
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR-AKNLRQLEKYTTVISAYNMAREFDM 307
G + R+ +MK G EPN +N+L+ +GR + ++ Y +I A F
Sbjct: 469 GMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKA-----GFTP 523
Query: 308 CVKFYN 313
CV YN
Sbjct: 524 CVTTYN 529
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 131/297 (44%), Gaps = 5/297 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M AG Y ++ A + GD E ++ L+ +S+ P+ T Y ++ +
Sbjct: 513 YEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSK--GFKPNETS-YSLMLNC 569
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G I K ++ I + +L+ + + E F+E + G D
Sbjct: 570 YAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPD 629
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L +F ++ ++ + M ++ E++ ++ + L +++ +++ W ++ +
Sbjct: 630 LVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILK 689
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G P V+Y ++I +CR GL +A + EM G C+V Y++ VA Y G
Sbjct: 690 GIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKG 749
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
+ +++ M C PN Y ++D + + K ++ + + I+ M + FD
Sbjct: 750 MFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNIT--EMDKSFD 804
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 131/283 (46%), Gaps = 3/283 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ ++KS G V + Y +++ F K G + ++ E E P Y L
Sbjct: 302 FFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNN---CPPDLVTYNELVA 358
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ ++G E F M KGI+ + Y ++I ++ + A F++ +E G +
Sbjct: 359 AYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVP 418
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + ++ M ++ +E+ ++++ M++ + ++ + + +V+
Sbjct: 419 NVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVF 478
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ S G P + T+ ++I AY R G K++ EM + GF CV Y++++ +
Sbjct: 479 REMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARR 538
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
G A ++ MK KG +PN Y+ +++ + + N R +EK
Sbjct: 539 GDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEK 581
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 138/305 (45%), Gaps = 25/305 (8%)
Query: 40 KVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA 99
K A L L + K+D + +++ LG+ + L+ ++ + D +
Sbjct: 159 KWAILNLYSRNEKID-----NQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWT 213
Query: 100 SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV-EKTLEVVESMKN 158
+++ +++ I + + A +F++ + G+ L + ++ +Y + G K L +++ M++
Sbjct: 214 TILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRS 273
Query: 159 AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK 218
L + +++ + A K + +L S+G + G TY S++ + + G+YS+
Sbjct: 274 NGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSE 333
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A + EM++ +V Y+ +VA Y + G + + M KG PN Y
Sbjct: 334 ALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITY----- 388
Query: 279 MHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
TTVI+AY A + D + F+ + + +G V + ++G+ K S
Sbjct: 389 --------------TTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKS 434
Query: 339 QIEEL 343
++EE+
Sbjct: 435 RLEEM 439
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 132/312 (42%), Gaps = 42/312 (13%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ + M GI+ ++ Y ++ A+ K G +K + F + ++ P+ Y +
Sbjct: 372 FIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQM--KESGCVPNVC-TYNAILG 428
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
LGK R E++ DM+ G + + +++ + K +F+E + G
Sbjct: 429 MLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEP 488
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC--VIVNGFSKRRAYWAAVK 186
+ + F L+ Y G +++ E M A + C++ ++N ++R + AA
Sbjct: 489 NRDTFNALIGAYGRCGSQIDVVKMYEEMIKA--GFTPCVTTYNALLNALARRGDWEAAES 546
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIG-----------LYSKA---------------- 219
V + S+G P + +Y+ ++N Y + G +Y+
Sbjct: 547 VILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANF 606
Query: 220 --------EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
E+ F E + G+ +V ++SM++++ K A ++ ++ G +P++
Sbjct: 607 KRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLV 666
Query: 272 IYNSLMDMHGRA 283
YNSLMDM+ R
Sbjct: 667 TYNSLMDMYARG 678
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 120/265 (45%), Gaps = 3/265 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+S G +S + ++ G + V +F E +S + + + L + G+
Sbjct: 446 MRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFE---PNRDTFNALIGAYGR 502
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G +++K + +M + G + Y +L+ + A + + AE + + + KG +
Sbjct: 503 CGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETS 562
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ Y + G ++ E + N + S + +V KRRA + +++
Sbjct: 563 YSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFC 622
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P V + S+++ + + +Y +A ++ +++ G +V Y+S++ MY + G
Sbjct: 623 KHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECW 682
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLM 277
++ ++ G +P++ YN+++
Sbjct: 683 KGEEILKGIQKSGGKPDLVSYNTVI 707
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 126/275 (45%), Gaps = 3/275 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L Y ++M G+ + Y ++ A + G + L E + L L Y
Sbjct: 274 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAL---DVFTY 330
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL + K G + L+ F +M +G+ Y SLI + + +V+ ++LF EA
Sbjct: 331 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ DL ++ L+ + G +++ E++ M+ + D ++ G
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K+ +++ +G P VTY ++I+ Y G A ++ EM KGF+ ++ Y++++
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 510
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G+ DA +V +M G P+ Y SL++
Sbjct: 511 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 545
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 23/318 (7%)
Query: 4 QSKLHYYEKMKS-AGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
Q+ L +M+ GI + Y ++ + K+G ++ +F E + K ++ P + M
Sbjct: 202 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKPEAV-M 259
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L G+ L + M E+G+ + Y L+ + A EL +E
Sbjct: 260 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 319
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + L+ + +EG V+K LE+ E+M + + ++ SK+
Sbjct: 320 GKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQ 379
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
K++++ + +G P V Y ++IN++ G +A ++ EM++K V Y++++
Sbjct: 380 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 439
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
GR+ +A +L+ +M +G +P++ YN T+IS Y+M
Sbjct: 440 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYN-------------------TLISGYSMK 480
Query: 303 REFDMCVKFYNEFRMNGG 320
+ ++ NE MN G
Sbjct: 481 GDVKDALRIRNEM-MNKG 497
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 139/313 (44%), Gaps = 36/313 (11%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDL-TPSSTHMY 63
+ L Y +MKS + + + ++ A S ALF + +L L T + M
Sbjct: 106 TSLRLYSRMKSLSLPISTASLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIML 161
Query: 64 KILCDSLGKSGRAFEILK----------------------------FFRDMKEKG-ILED 94
+ LC S GK RA E+L+ R+M+E+G I +
Sbjct: 162 RHLC-SAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPN 220
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV-FLKLVLMYIEEGMVEKTLEVV 153
Y ++I + + V A ++F E KG ++ V + L+ Y ++G ++ L
Sbjct: 221 QYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR 280
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ M + ++ ++V+ A ++ E++ +G TY +IN +C+
Sbjct: 281 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKE 340
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G KA ++F M ++G VV Y+S++ K G++++ +L + +G P++ +Y
Sbjct: 341 GNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 400
Query: 274 NSLMDMHGRAKNL 286
N+L++ H + N+
Sbjct: 401 NALINSHSTSGNI 413
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L K+G+ + + +M+++GI +V+ +I A FK
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVA 92
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
D+ F LV ++ G VE+ ++ ESM + + + ++ ++NG K
Sbjct: 93 GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++ + + GC P +TY+ ++ C+ G K + EM ++GF V+ Y+++
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+ K+ R+ +A+ LV M GC P V YNSLM++ R+K + + + V+S
Sbjct: 213 LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 3/226 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKG-ILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ IL D+L KSGR E + F M L + Y ++I ++ A EL
Sbjct: 103 FNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLM 162
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G ++ + LV + G +K +++ M + ++NG K R
Sbjct: 163 NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRL 222
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++ + +I GC P VTY S++ +CR +A ++ M ++G V+ Y+++
Sbjct: 223 DEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTV 282
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+A + R+ DA L+ +M C P+V Y++++D G K+ R
Sbjct: 283 IAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIID--GLCKDWR 326
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ AV+++ + + C+P + TY S+I+ C+ G +A ++ EM+ +G V ++
Sbjct: 14 HGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNG 70
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-----------------MHGRA 283
++ K GR DA+ + C P++ +N L+D MH +
Sbjct: 71 VIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSS 130
Query: 284 KNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ L + YTTVI+ + D ++ + G
Sbjct: 131 QCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETG 166
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 114/262 (43%), Gaps = 12/262 (4%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAF---YKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
++M +A V D Y I++ +++ K+ A E K P + Y ++
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ L ++ ++ + L R M + ++ D S ++ +I S ++ A ++F E+
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEV----VESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + L+ + G V+K + V VES + + +++G
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNS-----VLDGLCGVGRIEE 474
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV++ E +I + C P +Y ++I CR+ +A ++F ++ KGF V Y+ +V
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVN 534
Query: 244 MYGKTGRIRDAMRLVAKMKPKG 265
K R+ DA + K+ G
Sbjct: 535 ELCKKKRLSDAHGVANKLIEAG 556
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 133/321 (41%), Gaps = 32/321 (9%)
Query: 11 EKMKSAGIVLDSGCYCQI------MEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
E ++ +++ SGCY + ME F + S++V F + P Y
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCR---SKQVDRAFRLIQVMSERGCPPDVINYN 280
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV------KVAEELF 118
+ L + R + + M + D Y+++I V + A E+
Sbjct: 281 TVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEIL 340
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSK 177
+ ++ G + + ++ ++ L ++ M ++E+ + D S +++ K
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEV-VPDLSSFSMVIGSLCK 399
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
AA K++ + + C P V YA++I+ + G KA +VF E+ + F V
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVAT 458
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
Y+S++ GRI +A+R+V M K C P+ Y +L +R L + + V
Sbjct: 459 YNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGAL---------IRGLCRVSCVEE 509
Query: 298 AYNM-----AREFDMCVKFYN 313
AY + A+ F M V YN
Sbjct: 510 AYELFQAVEAKGFAMEVGVYN 530
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 23/243 (9%)
Query: 63 YKILCDSLGKSGR---------AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
Y + D L K R A EIL+ MK+ G + YA +I + +
Sbjct: 314 YSTIIDGLCKDWRVDADWKLEAACEILEM---MKQTGCPPNAGTYAVVIEGLCRARKSQQ 370
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A L + + ++ DL F ++ + ++ ++ M E + +++
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G SK AV+V+E L+ + PG TY S+++ C +G +A ++ M K
Sbjct: 431 GLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFP 489
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM----------DMHGRA 283
+Y +++ + + +A L ++ KG V +YN L+ D HG A
Sbjct: 490 DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVA 549
Query: 284 KNL 286
L
Sbjct: 550 NKL 552
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 132/268 (49%), Gaps = 14/268 (5%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAF-E 78
LD + I+ A+ +IG E+ +F + RK L+P+ Y ++ D GK GR++ +
Sbjct: 207 LDVRAWTTILHAYSRIGKYERAITMFEKM--RKTGLSPTLV-TYNVMLDVYGKMGRSWNK 263
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
IL +M+ G+ D +++I + + A + F + +G + + L+
Sbjct: 264 ILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQ 323
Query: 139 MYIEEGMVEKTLEVVESMKNAE-----LNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ + G+ + L +++ M+ + ++ ++ + GF + A + +I
Sbjct: 324 VFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGA-----DFIDTMIR 378
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G +P +TY ++INAY + G KA F +M++ G V Y++++ M GK R+ +
Sbjct: 379 KGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEE 438
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ ++ M+ GC PN +N+++ M G
Sbjct: 439 MIDMLCDMRSNGCAPNSVTWNTMLAMCG 466
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 132/306 (43%), Gaps = 10/306 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDS-EKVAALFLECESRKLDLTPSSTHMYKILCD 68
+EKM+ G+ Y +++ + K+G S K+ L E S L+ + C
Sbjct: 232 FEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISAC- 290
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G+ G E KFF +K +G + Y SL+ F A + KE E+
Sbjct: 291 --GREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPP 348
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
DL + +LV Y+ G E+ + +++M + + ++N + K A+ +
Sbjct: 349 DLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFF 408
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
Q+ GC+P TY +I+ + + + +M+ G V +++M+AM G
Sbjct: 409 RQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNK 468
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR-AKNLRQLEKYTTVISAYNMAREFDM 307
G + R+ +MK G EPN +N+L+ +GR + ++ Y +I A F
Sbjct: 469 GMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKA-----GFTP 523
Query: 308 CVKFYN 313
CV YN
Sbjct: 524 CVTTYN 529
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 131/297 (44%), Gaps = 5/297 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M AG Y ++ A + GD E ++ L+ +S+ P+ T Y ++ +
Sbjct: 513 YEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSK--GFKPNETS-YSLMLNC 569
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G I K ++ I + +L+ + + E F+E + G D
Sbjct: 570 YAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPD 629
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L +F ++ ++ + M ++ E++ ++ + L +++ +++ W ++ +
Sbjct: 630 LVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILK 689
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G P V+Y ++I +CR GL +A + EM G C+V Y++ VA Y G
Sbjct: 690 GIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKG 749
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
+ +++ M C PN Y ++D + + K ++ + + I+ M + FD
Sbjct: 750 MFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNIT--EMDKSFD 804
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 131/283 (46%), Gaps = 3/283 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ ++KS G V + Y +++ F K G + ++ E E P Y L
Sbjct: 302 FFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNN---CPPDLVTYNELVA 358
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ ++G E F M KGI+ + Y ++I ++ + A F++ +E G +
Sbjct: 359 AYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVP 418
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + ++ M ++ +E+ ++++ M++ + ++ + + +V+
Sbjct: 419 NVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVF 478
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ S G P + T+ ++I AY R G K++ EM + GF CV Y++++ +
Sbjct: 479 REMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARR 538
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
G A ++ MK KG +PN Y+ +++ + + N R +EK
Sbjct: 539 GDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEK 581
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 138/305 (45%), Gaps = 25/305 (8%)
Query: 40 KVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA 99
K A L L + K+D + +++ LG+ + L+ ++ + D +
Sbjct: 159 KWAILNLYSRNEKID-----NQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWT 213
Query: 100 SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV-EKTLEVVESMKN 158
+++ +++ I + + A +F++ + G+ L + ++ +Y + G K L +++ M++
Sbjct: 214 TILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRS 273
Query: 159 AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK 218
L + +++ + A K + +L S+G + G TY S++ + + G+YS+
Sbjct: 274 NGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSE 333
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A + EM++ +V Y+ +VA Y + G + + M KG PN Y
Sbjct: 334 ALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITY----- 388
Query: 279 MHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
TTVI+AY A + D + F+ + + +G V + ++G+ K S
Sbjct: 389 --------------TTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKS 434
Query: 339 QIEEL 343
++EE+
Sbjct: 435 RLEEM 439
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 132/312 (42%), Gaps = 42/312 (13%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ + M GI+ ++ Y ++ A+ K G +K + F + ++ P+ Y +
Sbjct: 372 FIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQM--KESGCVPNVC-TYNAILG 428
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
LGK R E++ DM+ G + + +++ + K +F+E + G
Sbjct: 429 MLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEP 488
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC--VIVNGFSKRRAYWAAVK 186
+ + F L+ Y G +++ E M A + C++ ++N ++R + AA
Sbjct: 489 NRDTFNALIGAYGRCGSQIDVVKMYEEMIKA--GFTPCVTTYNALLNALARRGDWEAAES 546
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIG-----------LYSKA---------------- 219
V + S+G P + +Y+ ++N Y + G +Y+
Sbjct: 547 VILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANF 606
Query: 220 --------EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
E+ F E + G+ +V ++SM++++ K A ++ ++ G +P++
Sbjct: 607 KRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLV 666
Query: 272 IYNSLMDMHGRA 283
YNSLMDM+ R
Sbjct: 667 TYNSLMDMYARG 678
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 120/265 (45%), Gaps = 3/265 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+S G +S + ++ G + V +F E +S + + + L + G+
Sbjct: 446 MRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFE---PNRDTFNALIGAYGR 502
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G +++K + +M + G + Y +L+ + A + + AE + + + KG +
Sbjct: 503 CGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETS 562
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ Y + G ++ E + N + S + +V KRRA + +++
Sbjct: 563 YSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFC 622
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P V + S+++ + + +Y +A ++ +++ G +V Y+S++ MY + G
Sbjct: 623 KHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECW 682
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLM 277
++ ++ G +P++ YN+++
Sbjct: 683 KGEEILKGIQKSGGKPDLVSYNTVI 707
>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 481
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Query: 37 DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
++E F E L TH+ KI+ + LG++ + DM +KG+ D
Sbjct: 24 NAEHALQFFRWVERSNLFEHNRETHL-KII-EILGRASKLNHARCILLDMPKKGLEWDED 81
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
++ +I S+ V+ + +LF++ EE G+ R ++ + L + G + M
Sbjct: 82 MWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKM 141
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
N + + V++ GF A + +E L S+ P VTY ++IN Y R+
Sbjct: 142 VNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDLKSREITPDVVTYNTMINGYTRVKKM 201
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+AEK F+EM++K D VV Y++++ Y R+ DA+RLV +MK G +PN Y++L
Sbjct: 202 EEAEKYFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDALRLVEEMKGLGIKPNAITYSTL 261
Query: 277 M 277
+
Sbjct: 262 L 262
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 17/271 (6%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
M+ ++ DS GK G E +K F+ M+E G+ Y +L + +++ F +
Sbjct: 82 MWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKM 141
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ F L+ + G VE E +K+ E+ ++NG+++ +
Sbjct: 142 VNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDLKSREITPDVVTYNTMINGYTRVKKM 201
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K + ++ + P VTY ++I Y I A ++ EM+ G + YS++
Sbjct: 202 EEAEKYFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDALRLVEEMKGLGIKPNAITYSTL 261
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEP-NVWIYNSLMDMHGRAKNL-------------- 286
+ ++ +A L+ +M K P + I+ L+ +A NL
Sbjct: 262 LPGLCDAEKMSEARSLLKEMVDKYIAPKDNSIFIRLISSQCKAGNLDAAADVLKAMIRLS 321
Query: 287 --RQLEKYTTVISAYNMAREFDMCVKFYNEF 315
+ Y +I Y A ++D VK +++
Sbjct: 322 IPTEAGHYGVLIENYCKAGKYDQAVKLFDKL 352
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 122/278 (43%), Gaps = 13/278 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++E +KS I D Y ++ + ++ E+ FLE + +K+D T + Y L
Sbjct: 172 FFEDLKSREITPDVVTYNTMINGYTRVKKMEEAEKYFLEMKEKKIDPTVVT---YTTLIK 228
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML- 127
R + L+ +MK GI + Y++L+ ++ A L KE +K +
Sbjct: 229 GYASIDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCDAEKMSEARSLLKEMVDKYIAP 288
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+D +F++L+ + G ++ +V+++M + V++ + K Y AVK+
Sbjct: 289 KDNSIFIRLISSQCKAGNLDAAADVLKAMIRLSIPTEAGHYGVLIENYCKAGKYDQAVKL 348
Query: 188 YEQLISQGCI--PGQV------TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+++LI + I P Y +I C G KAE + ++ + G ++ +
Sbjct: 349 FDKLIEKDIILRPQSTLHMEPSAYNPLIEYLCNNGQTGKAETLVRQLMKLGVQDS-ISLN 407
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+++ + + G A ++ M + + Y+SL+
Sbjct: 408 TLIRGHSQEGSPDSAFEILKIMLRRKVDSEKSAYDSLV 445
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 142/292 (48%), Gaps = 6/292 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+MKS GI + Y ++ + K D++ LF E +++ +L + +Y + +
Sbjct: 310 EEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNL---NGIIYSNIIHAH 366
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+SG + R+M+E GI VY S++ + + + K +F+ +E G +
Sbjct: 367 CQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTI 426
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +Y++ G V K + + + M++ + ++ +++NGF + A ++E
Sbjct: 427 ISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFED 486
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I G P + Y ++ A+C++G +A ++F MQ++ + ++ + G
Sbjct: 487 MIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGD 546
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
++ A + M+ GC P V YN+L +HG + Q+EK +V+ ++A
Sbjct: 547 MKRAFDTLDLMRRSGCAPTVMTYNAL--IHGLVRK-HQVEKAVSVLDKMSIA 595
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 153/376 (40%), Gaps = 47/376 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M +G+ D Y ++EAF K+G+ ++ +F + ++ S ++ + +
Sbjct: 484 FEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQ---PSNRTFRPIIEG 540
Query: 70 LGKSG---RAFEILKFFR--------------------------------DMKEKGILED 94
+G RAF+ L R M GI +
Sbjct: 541 FAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPN 600
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y ++ +A+ ++ A E F + +E G+ D+ ++ L+ + G ++ L V
Sbjct: 601 EHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTR 660
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M ++ + I ++++G+++R W A + +Q+ G P T+ S INA C+ G
Sbjct: 661 EMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAG 720
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+AE V EM G V +++++ + + A++ +MK G +P+ Y+
Sbjct: 721 DMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYH 780
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV---------KFYNEFRMNGGVIDRA 325
L+ + + YT + S E D+ V K+ ++ GG + A
Sbjct: 781 CLVTSLLSRATVMEGSTYTGIFSVCREMFENDLTVDLRTAVHWSKWLHKIERTGGALTEA 840
Query: 326 MAGIMVGVFSKLSQIE 341
+ I ++ +E
Sbjct: 841 LQRIFPPDWNSSENLE 856
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 140/332 (42%), Gaps = 21/332 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+S GI ++ Y ++ F + D ++F + K L P +Y +L ++
Sbjct: 450 KEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDM--IKSGLQPDRA-IYNLLVEAF 506
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G ++ F M+++ + + +I FA ++K A + G +
Sbjct: 507 CKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTV 566
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + + VEK + V++ M A + ++ +I+ G++ A + + +
Sbjct: 567 MTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTK 626
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G Y +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 627 IKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGD 686
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQ----------LEKYT 293
+ +A L+ +MK G PN+ + S + DM RA+N+ Q ++ +T
Sbjct: 687 VWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQ-RAENVIQEMADVGLKPNVKTFT 745
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
T+I + D +K + E + G D A
Sbjct: 746 TLIKGWARVSLPDRALKCFEEMKSAGLKPDEA 777
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 9/269 (3%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF---LECESRKLDLTPSSTHMYKILCD 68
+M+ GI Y +M + + D +K +F EC + ++ Y L +
Sbjct: 381 EMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIIS------YGCLIN 434
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G+ + + ++M+ GI + Y+ LI F + + A +F++ + G+
Sbjct: 435 LYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQP 494
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D ++ LV + + G +++ + + E M+ + S+ I+ GF+ A
Sbjct: 495 DRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTL 554
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ + GC P +TY ++I+ R KA V +M G Y+ ++ Y +
Sbjct: 555 DLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAAS 614
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G I A K+K G + +V+IY +L+
Sbjct: 615 GDIGKAFEYFTKIKESGLKLDVYIYETLL 643
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 32 FYKIGDSEKVAALFLECESRKLDLTP----SSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+ K GD A F +R ++ S H Y + D G L +MK
Sbjct: 261 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGA-------LSCVEEMK 313
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE--VFLKLVLMYIEEGM 145
+GI Y+ LI + + + A+ LFKEA+ K L +L ++ ++ + + G
Sbjct: 314 SEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTK--LDNLNGIIYSNIIHAHCQSGN 371
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+++ E+V M+ ++ + +++G++ + + V+E+L G P ++Y
Sbjct: 372 MDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGC 431
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+IN Y ++G KA + EM+ G YS ++ + +A + M G
Sbjct: 432 LINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSG 491
Query: 266 CEPNVWIYNSLMDMHGRAKNL 286
+P+ IYN L++ + N+
Sbjct: 492 LQPDRAIYNLLVEAFCKMGNM 512
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/279 (17%), Positives = 115/279 (41%), Gaps = 54/279 (19%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ ++ +A + A F+ +G+ + VF LV Y G + L VE MK
Sbjct: 254 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMK 313
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ + ++ ++++G+ K +A ++++ ++ + Y++II+A+C+ G
Sbjct: 314 SEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMD 373
Query: 218 KAEKVFIEMQQKGFD--------------------KC---------------VVAYSSMV 242
+AE++ EM++ G D KC +++Y ++
Sbjct: 374 RAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLI 433
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+Y K G++ A+ + +M+ G + N + Y+ +I+ +
Sbjct: 434 NLYVKVGKVPKAIAISKEMESHGIKHNN-------------------KTYSMLINGFIHL 474
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+F + + +G DRA+ ++V F K+ ++
Sbjct: 475 HDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMD 513
>gi|26452823|dbj|BAC43491.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 702
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 146/334 (43%), Gaps = 20/334 (5%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y M+ F K D EK LF E R + ++T I C ++G +++F
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIK-PDNATFTTIISCAR--QNGVPKRAVEWFE 234
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M G D A++I ++ V +A L+ A + D F L+ +Y G
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ L + E MK + + I +++ + + W A +Y+ LI+ G P TYA
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP- 263
+++ AY R A ++ EM++KG V+ Y+++++M G + +A + MK
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNC 414
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDM 307
+ C+P+ W ++SL+ ++ + + + E T+VI Y A++ D
Sbjct: 415 ETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDD 474
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
V+ +++ G D G ++ V ++ E
Sbjct: 475 VVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEE 508
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 5/222 (2%)
Query: 57 PSST-HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
P+ T Y + SL + L++ M G D + SLI + +V VA
Sbjct: 149 PAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVAR 208
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+LF + +G +D+ + L+ E G +++ +E+ M ++++ +V G
Sbjct: 209 DLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMY----AALVKGL 264
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+ + ++ G P YA++++ CR +AE++ EM +KG CV
Sbjct: 265 CNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCV 324
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V ++++ Y K GR+ DA+R++ MK +GC+PNVW YN+L+
Sbjct: 325 VTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 366
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 144/361 (39%), Gaps = 58/361 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++KM G D Y ++E + G ++ LF E + + HMY L
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDM-------HMYAALVKG 263
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM--- 126
L + R E L R MKE G YA+++ + K AEE+ +E EKG+
Sbjct: 264 LCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPC 323
Query: 127 --------------------LRDLEV------------FLKLVLMYIEEGMVEKTLEVVE 154
LR LE+ + LV + EG V K + ++
Sbjct: 324 VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLN 383
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M+ +N +++ G +A ++ + G I Q TY ++INA C+ G
Sbjct: 384 KMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDG 443
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A +F ++ +G V ++S++ K+G+ A + + KM GC P+ + Y+
Sbjct: 444 RTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYS 503
Query: 275 SLMD----MHGRAKNL----RQLEK--------YTTVISAYNMAREFDMCVKFYNEFRMN 318
S ++ M G + L L+K YT VI R + + + + E +
Sbjct: 504 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 563
Query: 319 G 319
G
Sbjct: 564 G 564
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 139/336 (41%), Gaps = 15/336 (4%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM++ G+ D+ Y ++ G E L E L + + Y L ++L
Sbjct: 384 KMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI---ADQYTYNALINALC 440
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K GR + F ++ +GI + + SLI + +A + ++ G D
Sbjct: 441 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTY 500
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ + + ++ L + M ++ S ++++ K R Y + + ++
Sbjct: 501 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 560
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+S GC P VTY + + AYC G ++AE V +EM + G +AY++++ + G+
Sbjct: 561 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 620
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTT-----VISAYNMAREFD 306
A+ ++ +M PN + Y L+ R + + + T I ++ FD
Sbjct: 621 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 680
Query: 307 MCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ K NEF N G + G FS+ + EE
Sbjct: 681 VMKK--NEFLPNSGTYSSILEG-----FSEDGRTEE 709
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 115/306 (37%), Gaps = 40/306 (13%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L G+ + + M+ G+ D Y LI ++ A L + E
Sbjct: 362 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 421
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G++ D + L+ ++G ++ + +S++ + + ++NG K
Sbjct: 422 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKAD 481
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRI-----GL---------------------- 215
A K E+++S GC P TY+S I C++ GL
Sbjct: 482 IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 541
Query: 216 --------YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
Y + + EM G + VV Y++ + Y GR+ +A ++ +M G
Sbjct: 542 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 601
Query: 268 PNVWIYNSLMDMHGRAKNLRQ----LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
+ YN+LMD H L++ T+V S N F + ++ R+ V+
Sbjct: 602 VDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF-ILLRHLVRMRLVEDVLP 660
Query: 324 RAMAGI 329
AG+
Sbjct: 661 LTPAGV 666
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 132/346 (38%), Gaps = 57/346 (16%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S M+ G++ D Y ++ A K G +++ +LF E+R + P++ +
Sbjct: 411 ESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIK--PNAV-TF 467
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI------------CSF------ 105
L + L KSG+A KF M G D Y+S I SF
Sbjct: 468 NSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 527
Query: 106 -----ASIAEVKVAEELFKEAE------------EKGMLRDLEVFLKLVLMYIEEGMVEK 148
+++ V +L KE G D+ + + Y EG + +
Sbjct: 528 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 587
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
V+ M + + +++G + AV + +Q+ S +P Q TY ++
Sbjct: 588 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 647
Query: 209 AYCRI------------GLYSKAE-----KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
R+ G++ E +F M++ F YSS++ + + GR
Sbjct: 648 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 707
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+A LV+ MK N IY +L+ ++K R L+ + V S
Sbjct: 708 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSK--RYLDAWVLVCS 751
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 135/302 (44%), Gaps = 8/302 (2%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
G LD Y ++ A + G E+ LF E R+ + P+ Y ++ D G+ G
Sbjct: 176 PPGARLDVRAYTTVLHALSREGRYERALRLFDEL--RREGVAPTRV-TYNVVLDVYGRMG 232
Query: 75 RAFE-ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
R++ ++ DM+ G+ D +++I + V A F++ + +G + +
Sbjct: 233 RSWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTY 292
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ ++ + G + L V+ M++A + +++ Y A K + +I
Sbjct: 293 NALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIG 352
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G +P TY +I+ AY G +A +F M++ GF Y+ ++ M GK R
Sbjct: 353 KGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAA 412
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYN 313
+ ++ +M GC PN +N+L+ + G+ R +E Y T + + + ++C YN
Sbjct: 413 MLEMLGEMSRSGCTPNRVTWNTLLAVCGK----RGMESYVTRVLEGMKSCKVELCRDTYN 468
Query: 314 EF 315
Sbjct: 469 TL 470
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 138/320 (43%), Gaps = 20/320 (6%)
Query: 38 SEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
S + AL SR+ DL ++ L +L SG L R + +G + P+
Sbjct: 92 STPLPALPSFLASRRDDLLRAAD--LPSLLKALELSGHWEWALALLRWARAEGAADGPAP 149
Query: 98 YASLICSFASIAEVKVAEELFKEAE-EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
+ ++ + L E G D+ + ++ EG E+ L + + +
Sbjct: 150 FEMVVRALGREGRHDAVCALLDEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDEL 209
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWA-AVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
+ + + V+++ + + W V + + + G P T +++I A R GL
Sbjct: 210 RREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGL 269
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+A F +++ +G CVV Y++++ ++GK G +A+R++ +M+ GC+P+ YN
Sbjct: 270 VDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNE 329
Query: 276 LMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
L + RA ++ K Y T+++AY A + D + ++ + NG
Sbjct: 330 LAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNG 389
Query: 320 GVIDRAMAGIMVGVFSKLSQ 339
+ +++G+ K S+
Sbjct: 390 FIPYTNTYNLVLGMLGKKSR 409
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 127/297 (42%), Gaps = 12/297 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M +AG Y ++ + GD ++ + +S S Y +L
Sbjct: 487 YDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMS---YSLLLQC 543
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G A I +++ + I + +L+ + ++ E F+E + +G D
Sbjct: 544 HAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPD 603
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + ++ +Y + G+ K +E+ ES++ L+ +++ ++K W A K+
Sbjct: 604 LVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILN 663
Query: 190 QL---------ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+L Q P V+Y ++IN +C+ GL +A++V EM G CV+ Y +
Sbjct: 664 RLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIADGVAPCVITYHT 723
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+V Y +A +V M + +P Y ++D + RAK + V++
Sbjct: 724 LVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDARDFLAVVA 780
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 7/287 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF-LECESRKLDLTPSSTHMYKI 65
L +++MK G + + Y ++ +G + AA+ + E + TP+ +
Sbjct: 379 LALFDRMKKNGFIPYTNTYNLVLGM---LGKKSRFAAMLEMLGEMSRSGCTPNRV-TWNT 434
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L GK G + + MK + Y +LIC++ A +++ E G
Sbjct: 435 LLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAG 494
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
L + L+ + +G +V MK+ +D +++ +K A +
Sbjct: 495 FAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKG-GNAAGI 553
Query: 186 KVYEQLISQGCI-PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ E+ + QG I P V +++ A + E+ F E++ +G +V +SM+++
Sbjct: 554 EAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSI 613
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
Y K G AM + ++ G P++ YNSLMDM+ ++ + EK
Sbjct: 614 YAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEK 660
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 3/276 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ G+ + ++ K G E +F E + LTP Y L K
Sbjct: 216 MREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMA--REGLTPDGVS-YNTLVSGYCK 272
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G E L F +M +KG++ D + SLI + ++ A L + E+G+ +
Sbjct: 273 AGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFT 332
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F L+ + G ++ L ++ M+ + S V++NG+ K A ++ ++
Sbjct: 333 FTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEME 392
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
++G P VTY++I++ YC+IG A ++ +M +KG + YSS++ + R+
Sbjct: 393 AKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLG 452
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
DA L KM G +P+ + Y +L+D H + N+++
Sbjct: 453 DACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQK 488
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 5/275 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
L + +M G+V D + ++ A + G+ E+ AL + R L + + +
Sbjct: 277 HEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFT---F 333
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D ++G + L ++M+E I Y LI + + + A EL E E
Sbjct: 334 TALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEA 393
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYW 182
KGM D+ + ++ Y + G + E+ M + + D I+ ++ G + R
Sbjct: 394 KGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGV-VPDAITYSSLIRGLCEERRLG 452
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +++E+++ G P + TY ++I+ +C+ G KA + EM +KG VV YS ++
Sbjct: 453 DACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLI 512
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K+ R ++A RL+ K+ + P+ Y +LM
Sbjct: 513 DGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 17/263 (6%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFF-RDMKEKGILEDPSVYASLICSFASIAEVK 112
D + + Y IL +L G+ E L DM+ G + Y +L+ +F EV
Sbjct: 148 DGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVD 207
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
AE L E G+ L F +V + G +E ++ + M L +V
Sbjct: 208 AAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLV 267
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+G+ K A+ V+ ++ +G +P VT+ S+I+A CR G +A + +M+++G
Sbjct: 268 SGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLR 327
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQL 289
+++++ + + G + DA+ + +M+ +P+V YN L++ + GR R+L
Sbjct: 328 MNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEAREL 387
Query: 290 -------------EKYTTVISAY 299
Y+T++S Y
Sbjct: 388 IHEMEAKGMKPDVVTYSTILSGY 410
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 122/265 (46%), Gaps = 26/265 (9%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCDSLGKSGRAFEILK 81
CY ++ + K+G ++ L E E++ K D+ ST + C +G + AFE+
Sbjct: 367 CYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYST-ILSGYC-KIGDTDSAFEL-- 422
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
R M +KG++ D Y+SLI + A ELF++ + G+ D + L+ +
Sbjct: 423 -NRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHC 481
Query: 142 EEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+EG V+K L + + M + + D ++ V+++G SK A ++ +L + +P
Sbjct: 482 KEGNVQKALSLHDEMIKKGV-LPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDN 540
Query: 201 VTYASIINAYCRI----------------GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ Y ++++ CR GL ++A+KV+ M + + YS ++
Sbjct: 541 IKYEALMHC-CRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHG 599
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPN 269
+ + G I A+ ++ G PN
Sbjct: 600 HCRGGNIMKALSFHKQLLRCGFSPN 624
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF-IEMQQKGFDKCVVAYSSM 241
+A ++ ++ G P TY ++ A C G +A V +M+ G VV Y+++
Sbjct: 137 SARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTL 196
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL--------- 289
VA + + G + A RLV M+ G P++ +N++++ GR ++ R++
Sbjct: 197 VAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGL 256
Query: 290 ----EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
Y T++S Y A + + E G V D
Sbjct: 257 TPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 101/243 (41%), Gaps = 24/243 (9%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAF---YKIGDSEKVAALFLECESRKLDLTPS 58
++ S KM G+V D+ Y ++ ++GD+ ++ L+ L L P
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQ-----LGLQPD 469
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL- 117
Y L D K G + L +M +KG+L D Y+ LI + A K A+ L
Sbjct: 470 E-FTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLL 528
Query: 118 FKEAEEKGMLRDLEV--------------FLKLVLMYIEEGMVEKTLEVVESMKNAELNI 163
FK E + +++ + L+ + +G++ + +V +SM + +
Sbjct: 529 FKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKL 588
Query: 164 SDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
+ V+++G + A+ ++QL+ G P + S++ G+ +A+ V
Sbjct: 589 DGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVI 648
Query: 224 IEM 226
E+
Sbjct: 649 QEL 651
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 26/251 (10%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M++ G+ D Y I+ + KIGD++ +A L + K + P + Y L L
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTD--SAFELNRKMLKKGVVPDAI-TYSSLIRGL 445
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ R + + F M + G+ D Y +LI V+ A L E +KG+L D+
Sbjct: 446 CEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDV 505
Query: 131 EVFLKLV-----------------LMYIEEGMVE--KTLEVVESMKNAELNISDCISCVI 171
+ L+ +Y E+ + + K ++ + AE +
Sbjct: 506 VTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSV----VAL 561
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ GFS + A KVY+ ++ + Y+ +I+ +CR G KA ++ + GF
Sbjct: 562 LKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGF 621
Query: 232 DKCVVAYSSMV 242
+ S+V
Sbjct: 622 SPNSTSTISLV 632
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 136/274 (49%), Gaps = 4/274 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDS-EKVAALFLECESRKLDLTPSSTHMYKILCD 68
+E M+ G ++ Y +++ + K GDS +++ +LF E + L+++P + Y +
Sbjct: 236 FETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEM--KDLEISPDD-YTYNTMIT 292
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ ++ E L+ F++MKE G + Y +L+ + K A EL E E G+
Sbjct: 293 ACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISP 352
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + +L+ Y G+ ++ + +S+ + L + C +++ F++ Y A++ +
Sbjct: 353 NIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETF 412
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ C P VTY +I+ Y R+ KVF MQ+K +V ++S++ +G
Sbjct: 413 TEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNC 472
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
G + + + +MK G P V +N L++ +GR
Sbjct: 473 GMLTEVSNVFREMKRAGYMPGVDTFNILIECYGR 506
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 153/380 (40%), Gaps = 55/380 (14%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
S G+ D YC ++ AF + EK F E RK + TP+ Y IL D G+
Sbjct: 382 SKGLCPDEFTYCTLISAFNRAERYEKALETFTEM--RKTNCTPNIV-TYNILIDIYGRME 438
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE----------- 123
+ +++K F+ M+EK D + SL+ SF + + +F+E +
Sbjct: 439 KLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFN 498
Query: 124 -------------------KGMLR-----DLEVFLKLVLMYIEEGMVEKTLEVVESMKNA 159
KG+LR + F L+ EG ++ +V + M A
Sbjct: 499 ILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEA 558
Query: 160 ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP-GQVTYASIINAYCRIGLYSK 218
L +SD +++ ++ ++ K ++L P + + + AYC+ G+ ++
Sbjct: 559 GLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNE 618
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A+ ++ G + +++M++M K G I A++L+ +++ +P+ YN LM
Sbjct: 619 AQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMS 678
Query: 279 MHG----------------RAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVI 322
M+G RA L Y T++ +Y D + + +
Sbjct: 679 MYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRP 738
Query: 323 DRAMAGIMVGVFSKLSQIEE 342
D +VG +S L +E
Sbjct: 739 DNFTFNTLVGSYSSLGLYKE 758
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 124/276 (44%), Gaps = 21/276 (7%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILE-DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
LG + L+ F +K+ D Y SLI + LF+ + +G
Sbjct: 187 LGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRG 246
Query: 129 DLEVFLKLVLMYIEEG-MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + ++ +Y + G ++ + + MK+ E++ D ++ + A+++
Sbjct: 247 NAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRL 306
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++++ GC P +VTY ++++ Y + G++ +A ++ +EM+ G +V Y+ ++A Y +
Sbjct: 307 FQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYAR 366
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDM 307
G +A L + KG P+ + Y T+ISA+N A ++
Sbjct: 367 AGLCDEAAALKKSLLSKGLCPDEFTY-------------------CTLISAFNRAERYEK 407
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
++ + E R + I++ ++ ++ +++++
Sbjct: 408 ALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDM 443
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 108/223 (48%), Gaps = 11/223 (4%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEK------GILEDPSVYASLICSFASIAEVKVAEELFK 119
L S SG+ F++ K+ ++++ GIL V A C + A++ + +L+
Sbjct: 570 LIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLAL-NQLY- 627
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
+ G D++VF ++ M + G +E+ ++++E ++ A+L +++ + +
Sbjct: 628 ---DNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREG 684
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
Y+ A +V ++ G P +TY +++ +Y + G A +VF +M ++
Sbjct: 685 MYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFN 744
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
++V Y G ++A+ ++ M GC+P + +L+D + R
Sbjct: 745 TLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNR 787
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 160/359 (44%), Gaps = 23/359 (6%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L ++++M+ G + + Y +++ + K+ K+ F S L +
Sbjct: 220 NLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKL---RKIDDGFELLRSMALKGLEPNLI 276
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y ++ + L + GR EI +M ++G D Y +LI + A + E
Sbjct: 277 SYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G+ + + L+ + G + + E ++ M+ L ++ +V+GFS++
Sbjct: 337 LRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +V +++I G P VTY ++IN +C G A V +M++KG VV+YS++
Sbjct: 397 NEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTV 456
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE----------- 290
++ + ++ + +A+R+ KM KG +P+ Y+SL + G + R E
Sbjct: 457 LSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSL--IQGFCEQRRTKEACDLFDEMLRV 514
Query: 291 -------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I+AY M + ++ +NE G + D +++ +K ++ E
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTRE 573
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 132/281 (46%), Gaps = 5/281 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G LD Y +++ + K G+ + AL + E + L+PS Y L S+
Sbjct: 300 EMNKRGYSLDEVTYNTLIKGYCKEGNFHQ--ALVMHAEMLRHGLSPSVI-TYTSLIHSMC 356
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G +F M+ +G+ + Y +L+ F+ + A + KE + G +
Sbjct: 357 KAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVV 416
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + G + + V+E MK L D +S +++GF + A++V +
Sbjct: 417 TYNALINGHCIAGKMVDAIAVLEDMKEKGLT-PDVVSYSTVLSGFCRSYDVDEALRVKRK 475
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++++G P +TY+S+I +C +A +F EM + G Y++++ Y G
Sbjct: 476 MVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
++ A++L +M KG P+V Y+ L++ + R+ ++
Sbjct: 536 LQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKR 576
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 108/218 (49%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL +G L+FF M++KG L + Y +LI + + ++ EL +
Sbjct: 208 YNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMA 267
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ +L + ++ EG +++ V+ M ++ + ++ G+ K +
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ ++ +++ G P +TY S+I++ C+ G ++A + +M+ +G Y+++V
Sbjct: 328 QALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLV 387
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ + G + +A R++ +M G P+V YN+L++ H
Sbjct: 388 DGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGH 425
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++ GF A++ ++++ +GC+P VTY ++I+ YC++ ++ M K
Sbjct: 210 ILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALK 269
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ- 288
G + +++Y+ ++ + GR+++ ++ +M +G + YN+L+ + + N Q
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 289 ---------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
+ YT++I + A + +F ++ R+ G + +V
Sbjct: 330 LVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 334 FSKLSQIEE 342
FS+ + E
Sbjct: 390 FSQKGYMNE 398
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 116/276 (42%), Gaps = 27/276 (9%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E MK G+ D Y ++ F + D ++ AL ++ + + P T Y L
Sbjct: 439 EDMKEKGLTPDVVSYSTVLSGFCRSYDVDE--ALRVKRKMVAKGIKPD-TITYSSLIQGF 495
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ R E F +M G+ D Y +LI ++ +++ A +L E EKG+L D+
Sbjct: 496 CEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDV 555
Query: 131 EVF------------------LKLVLMYIEEGMVEKTLE-VVESMKNAELNISDCISCVI 171
+ L L L Y E + T ++E+ N E +S +
Sbjct: 556 VTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF--KSVVS--L 611
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ GF + A +V+E ++ + P Y +I+ +CR G KA ++ EM + GF
Sbjct: 612 IKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGF 671
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
V ++V K G++ + ++A + + CE
Sbjct: 672 LLHTVTVIALVKTLHKEGKVNELNSVIANVL-RSCE 706
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
SKR +A V+++++ P TY +I +C G A + F M++KG V
Sbjct: 182 SKRNISFAE-NVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNV 240
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y++++ Y K +I D L+ M KG EPN+ YN +++
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVIN 283
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 133/272 (48%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + MK GI D Y +++ ++ +AL E R L++ P + +L
Sbjct: 258 LDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALL--NEMRSLNIMPDIV-TFNVL 314
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D++ K G+ E + M E G+ D Y+SL+ ++ +EV A +LF KG
Sbjct: 315 VDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGC 374
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ Y + +++ ++ M + L ++ +++G + + A
Sbjct: 375 KPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARN 434
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ + + G +P TY+ +++ +C+ G + KA ++F MQ +V Y+ ++
Sbjct: 435 LFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMC 494
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+G +RDA +L +++ KG +PN IY ++++
Sbjct: 495 KSGNLRDARKLFSELFVKGLQPNAQIYTTIIN 526
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 83/161 (51%)
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L K+ E G+ ++ L+ + V+ V+ + L + ++N
Sbjct: 120 LTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLC 179
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K + A+++++ ++++GC P TY +IIN C+IG + A + +M++ G VV
Sbjct: 180 KVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVV 239
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
YS+++ + K R+ +A+ + + MK KG P+++ YNSL+
Sbjct: 240 TYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLI 280
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Query: 103 CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKT-LEVVESMKNAEL 161
CSF +I + + F + L + F KL+ ++ G T + + + M+ A L
Sbjct: 73 CSFRNIDDALAS---FNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
+ + +++N FS + A V ++I G P VT+ ++IN C++G +++A +
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+F +M +G V Y++++ K G A L+ KM+ GC+PNV Y++++D H
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249
Query: 282 RAKNLRQ 288
+ + + +
Sbjct: 250 KDRRVNE 256
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 36/226 (15%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
KL L P+ + L + L K G+ + ++ F DM +G D Y ++I I E
Sbjct: 161 KLGLQPTIV-TFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGET 219
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A L K+ EE G ++ + I
Sbjct: 220 AAAAGLLKKMEEAGCQPNVVTY-----------------------------------STI 244
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ K R A+ ++ + +G P TY S+I C + +A + EM+
Sbjct: 245 IDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNI 304
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+V ++ +V K G++ +A ++ M G EP+V Y+SLM
Sbjct: 305 MPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLM 350
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++A K G+ LF E + L + +Y + + L K G E L+ FR
Sbjct: 486 YNILIDAMCKSGNLRDARKLFSELFVKGLQ---PNAQIYTTIINGLCKEGLLDEALEAFR 542
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+M+E G D Y +I F + A +L E +KG + D+
Sbjct: 543 NMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADV 588
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 154/335 (45%), Gaps = 12/335 (3%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N++ L Y+ M G+V D + +++ K G+ + LF+ K +TP+
Sbjct: 267 NAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVN--MIKFSVTPN-IA 323
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L D+ K G E + F +++ + D Y+ LI S++ + A +F++
Sbjct: 324 VYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKM 383
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++G+L + + L+ +EG ++K LE+ M + + +++G+ K R
Sbjct: 384 TKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNL 443
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AA+ +Y +++ + P VTY ++I+ +C+ G +A K++ +M G S +
Sbjct: 444 QAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCL 503
Query: 242 VAMYGKTGRIRDAMRLVA-KMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
+ K G+I DA+ L K++ + NV D G +L YT +I
Sbjct: 504 LDGLCKDGKISDALELFTEKIEFQTPRCNV-------DAGGSKPSLTNHVAYTALIHGLC 556
Query: 301 MAREFDMCVKFYNEFRMNGGVIDRAMAGIMV-GVF 334
+F VK +++ R G D + +M+ G+F
Sbjct: 557 QDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLF 591
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 117/238 (49%), Gaps = 1/238 (0%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R++ + P+ + Y L D K A + L+ ++DM +G++ D + LI E
Sbjct: 244 REVGVYPN-VYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGE 302
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
+K A LF + + ++ V+ L+ Y + G V + + + ++ E++ +
Sbjct: 303 MKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSI 362
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ G A ++E++ +G + VTY S+I+ C+ G KA ++ +M + G
Sbjct: 363 LIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENG 422
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ V+ +S+++ Y K ++ AM + ++M K P+V Y +++D H + ++++
Sbjct: 423 VEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKE 480
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M+ G+ + Y +M+ + K+ ++++ L+ + L P + IL D
Sbjct: 240 HRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGE--GLVPDVV-TFGILIDG 296
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G F +M + + + +VY SLI ++ + +V A LF E E + D
Sbjct: 297 LCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPD 356
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ E+ + E M + + +++G K A+++
Sbjct: 357 VFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICS 416
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+ G P +T++++I+ YC+I A ++ EM K VV Y++M+ + K G
Sbjct: 417 QMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYG 476
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+++A++L + M G PN + + L+D
Sbjct: 477 SMKEALKLYSDMLDNGITPNCYTISCLLD 505
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
V+ +L+++ + +VE+ L + + A L I C V++ K + ++YE+
Sbjct: 116 NVYGELIIVLCKMELVEEALSMYHKV-GAALTIQAC--NVLLYVLVKTGRFELLWRIYEE 172
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+IS G P +T+ ++I+ CR G +A+++F EM+ KG V+ Y+ ++ +
Sbjct: 173 MISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNK 232
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
I +A + M+ G PNV+ YN+LMD + + N +Q
Sbjct: 233 IEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 37/220 (16%)
Query: 70 LGKSGRAFEIL-KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K+GR FE+L + + +M G+ + +LI ++ A+E+F E KG++
Sbjct: 157 LVKTGR-FELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVP 215
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ V+ L+ + +E+ ESM A +
Sbjct: 216 TVIVYTILIRGLCSDNKIEEA----ESMHRAMREV------------------------- 246
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
G P TY ++++ YC++ +A +++ +M +G VV + ++ K
Sbjct: 247 ------GVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKF 300
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G ++ A L M PN+ +YNSL+D + + ++ +
Sbjct: 301 GEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSE 340
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 84/184 (45%), Gaps = 3/184 (1%)
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
P+VY LI + ++++ EE + G ++ L+ + ++ G E + E
Sbjct: 115 PNVYGELI---IVLCKMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYE 171
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M + L+ S +++G ++ A ++++++ +G +P + Y +I C
Sbjct: 172 EMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDN 231
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+AE + M++ G V Y++++ Y K + A+RL M +G P+V +
Sbjct: 232 KIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFG 291
Query: 275 SLMD 278
L+D
Sbjct: 292 ILID 295
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 12/291 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL---DLTPSST 60
Q + EK+ + G Y ++ K+G E+ L RK+ TP
Sbjct: 182 QDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL-----RKIVDNGCTPDVV 236
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y L D LGK R+FE K F++M +G++ D Y +LI ++ A ++K
Sbjct: 237 -TYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKT 295
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+G + D+ ++ + G + + + +SM+ L ++ + +++G K R
Sbjct: 296 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 355
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A+++ Q+ C P +TY +I+ C+ G A F EM + G V Y+
Sbjct: 356 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 415
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+V+ + K G A + M C PNV Y +L+ G K RQL K
Sbjct: 416 LVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLIS--GLCKR-RQLTK 463
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 2/251 (0%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+++ F + D++ LF +C S S H L D ++ R E ++
Sbjct: 28 VVKIFQCLKDADLAWELF-QCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNEL 86
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK-GMLRDLEVFLKLVLMYIEEGMV 146
L D + LI + E + A + +E EE G+ L+ ++ + G V
Sbjct: 87 ATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKV 146
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
++ E+ I IV+ +K + AV + E++ + GC P TY ++
Sbjct: 147 LAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNAL 206
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
+N C++G +A + ++ G VV Y+S++ GK R +A +L +M +G
Sbjct: 207 LNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGL 266
Query: 267 EPNVWIYNSLM 277
+ Y +L+
Sbjct: 267 VLDTVCYTALI 277
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 1/218 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D + G ++ R M E+G + Y +++ S ++ A +LFKE E
Sbjct: 152 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEME 211
Query: 123 EKGMLR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G D+ + +V ++ G V+ +VE+M + + + +++G K
Sbjct: 212 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKL 271
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + +++ GC P VTY +II+ +C++G +A + EM G VV Y+ +
Sbjct: 272 DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL 331
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ + K G+ DA+ LV M KG PN++ YNSL+DM
Sbjct: 332 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 369
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 110/244 (45%), Gaps = 13/244 (5%)
Query: 48 CESRKLDLT-------------PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
C RKLD P Y + DSL KSG+ + + M KG +
Sbjct: 195 CSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPN 254
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y+SL+ ++ A L + G ++ + ++ + + G +++ ++E
Sbjct: 255 VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE 314
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M + + V+++ F K A+ + E ++ +G +P TY S+++ +C+
Sbjct: 315 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 374
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A ++ M QKG VV+Y++++A K ++ + + L+ +M C P++ +N
Sbjct: 375 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 434
Query: 275 SLMD 278
+++D
Sbjct: 435 TIID 438
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 120/287 (41%), Gaps = 17/287 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + L K+ + E + M + D + ++I + V +A ELF +
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 457
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
E G +L + LV + ++ ++ M + D I+ +++G K +
Sbjct: 458 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 517
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K++ Q++S G P VTY+ +I++ C+ +A V M + GFD + Y ++
Sbjct: 518 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL 577
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----LE------- 290
+ + KTG + A+ ++ + KG P+V ++ +D + LRQ LE
Sbjct: 578 IDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 637
Query: 291 -----KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
Y T++ + A + V + R G D A +VG
Sbjct: 638 VPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVG 684
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + K+ R L M +G D Y ++I + +V A + +
Sbjct: 82 YNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI 141
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G ++ + LV + G ++ +E+V M + I++G R
Sbjct: 142 QRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLD 201
Query: 183 AAVKVYEQLISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+A+++++++ G C P TY++I+++ + G A ++ M KG VV YSS+
Sbjct: 202 SALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSL 261
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ K G++ +A L+ +M GC PN+ YN+++D H
Sbjct: 262 LHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGH 300
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++GF K A+ + EQ++ +GC P V+Y ++IN C++ +A +V +M Q+
Sbjct: 84 TVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQR 143
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
G V+ Y ++V + + G + A+ LV KM +G PN YN++ MHG
Sbjct: 144 GCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI--MHG 193
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 81/166 (48%), Gaps = 16/166 (9%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++NG SK A+++ E+++ G P +Y ++++ +C+ A + +M +
Sbjct: 49 TMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMR 108
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGR 282
G VV+Y++++ K ++ +A R++ KM +GC+PNV Y +L+ D+ G
Sbjct: 109 GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGA 168
Query: 283 AKNLRQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ +R++ + Y ++ R+ D ++ + E +G
Sbjct: 169 VELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESG 214
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 11/216 (5%)
Query: 50 SRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA---SLICSFA 106
+RK +P Y + D L KS R K F M G+ D Y+ S +C +
Sbjct: 492 TRKQGCSPDII-TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 550
Query: 107 SIAEVK-VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD 165
+ E V E + K + G + + L+ + + G ++K LE+++ + ++ + D
Sbjct: 551 FMDEANNVLELMLKNGFDPGAI----TYGTLIDGFCKTGNLDKALEILQLLL-SKGSYPD 605
Query: 166 CIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI 224
++ + ++ SKR A ++ E ++ G +P VTY +++ +C A +F
Sbjct: 606 VVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFE 665
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
M+Q G + Y+++V +D + V+K
Sbjct: 666 VMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSK 701
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 133/276 (48%), Gaps = 11/276 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYK 64
LH+++K+ + G L+ Y ++ K+G ++ + + + +LD+ MY
Sbjct: 159 LHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVV-----MYN 213
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ D + K + F+ +M K I Y +LIC + ++K A L + +
Sbjct: 214 TIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILE 273
Query: 125 GMLRDLEVFLKLVLMYIEEGMVE--KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ + F LV + +EG V+ K + VV K+ + NI S ++NG+
Sbjct: 274 NINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNS--LMNGYCLVNEVN 331
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ + G P +Y+ +I+ +C+I + +A K+F EM K VV Y+S++
Sbjct: 332 KAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLI 391
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+GRI A++L+ +M +G PN+ YNSL+D
Sbjct: 392 DGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLD 427
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
++ P+ + + IL D+ K G+ E F M +K + + Y SL+ + + EV
Sbjct: 274 NINPT-VYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNK 332
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
AE +F + G+ D+ + ++ + + MV++ +++ E M ++ +++
Sbjct: 333 AESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLID 392
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G K A+K+ ++ +G P +TY S+++A C+ KA ++ +++
Sbjct: 393 GLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQP 452
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V Y+ ++ K+GR++DA ++ + G +V+ YN+++
Sbjct: 453 SVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMI 496
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 108/273 (39%), Gaps = 22/273 (8%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG + +F + F ++ +KG D +LI ++ A + G +
Sbjct: 117 LGHNSLSFSV---FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLN 173
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G + LE++ + + + + I++G K + A Y
Sbjct: 174 QVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYS 233
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++++ P VTY ++I C +G A + +M + + V +S +V + K G
Sbjct: 234 EMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEG 293
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
++++A + M K +PN+ YNSLM+ Y + E +
Sbjct: 294 KVKEAKNVFVVMMKKDVKPNIVTYNSLMN-------------------GYCLVNEVNKAE 334
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+N G D IM+ F K+ ++E
Sbjct: 335 SIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDE 367
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 3/191 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +M + + + K ++F ++ + P H Y I+ K E +K F
Sbjct: 317 YNSLMNGYCLVNEVNKAESIF--NTMAQIGVAPD-VHSYSIMISGFCKIKMVDEAMKLFE 373
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M K I D Y SLI + A +L E ++G ++ + L+ +
Sbjct: 374 EMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNH 433
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
V+K +E++ +K+ + S C +++NG K A KV+E ++ G TY
Sbjct: 434 HVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYN 493
Query: 205 SIINAYCRIGL 215
++I +C+ G
Sbjct: 494 TMIKGFCKKGF 504
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F M + G+ D Y+ +I F I V A +LF+E K + D+ + L+ +
Sbjct: 337 FNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCK 396
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G + L+++ M + + +++ K A+++ +L P T
Sbjct: 397 SGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCT 456
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
Y +IN C+ G A+KVF ++ G++ V Y++M+ + K G +
Sbjct: 457 YNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 54/109 (49%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N FS+ + V+ ++ +G P +T ++I C G KA ++
Sbjct: 109 ILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLAL 168
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GF V+Y +++ K G+ + A+ ++ ++ K +V +YN+++D
Sbjct: 169 GFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIID 217
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
I+ K Y V ++ Q+ G VT + +IN + ++G S + VF + +KG
Sbjct: 75 ILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKG 134
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ + ++++ G I A+ K+ G + N Y +L++
Sbjct: 135 YEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLIN 182
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 145/333 (43%), Gaps = 25/333 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD-- 68
++M G+ D Y +++A+ + G E L E E+ + PSS +IL
Sbjct: 323 DEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAGFR 380
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G +AF +L R+M+ G+ D Y +I +F + A + F + E+G+
Sbjct: 381 DRGDWQKAFAVL---REMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEP 437
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK-V 187
D+ + L+ + + G ++ E+ E M+ + +++N ++ +W V+ +
Sbjct: 438 DVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQE-HWEGVEAM 496
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ QG +P +TY ++++ Y R G Y +A M+ G Y ++V Y +
Sbjct: 497 LSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 556
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG---------------RAKNLRQ-LEK 291
G A+ +V MK G E ++ + NSL++ G R LR +
Sbjct: 557 RGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVIT 616
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
YTT++ A +FD Y E +G DR
Sbjct: 617 YTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 649
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 134/299 (44%), Gaps = 39/299 (13%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE-- 78
D+ + ++ AF + + AAL L ++ + LTP S + L +LG +GR E
Sbjct: 227 DAPLFSDLISAFARAALPD--AALELLASAQAIGLTPRSNAV-TALISALGTAGRVAEAE 283
Query: 79 --ILKFF--------------------------------RDMKEKGILEDPSVYASLICS 104
L+FF +M + G+ D + Y+ L+ +
Sbjct: 284 ALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 343
Query: 105 FASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS 164
+ + A L KE E G+ VF +++ + + G +K V+ M+ + +
Sbjct: 344 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPD 403
Query: 165 DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI 224
V+++ F K A+ + ++ +G P VT+ ++I+A+C+ G + +A ++F
Sbjct: 404 RHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFE 463
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
EM++ Y+ M+ + G+ ++++MK +G PN+ Y +L+D++GR+
Sbjct: 464 EMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRS 522
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KM+ GI D + +++A K G ++ A LF E P T Y I+ +
Sbjct: 427 FNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN---CPPGTTTYNIMINL 483
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ + +MKE+G++ + Y +L+ + K A + + + G+
Sbjct: 484 LGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPS 543
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ LV Y + G+ + L VV++MK L +S + ++N F + R A V +
Sbjct: 544 PTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQ 603
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+ G P +TY +++ A R+ + K ++ EM G
Sbjct: 604 FMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSG 644
>gi|9755842|emb|CAC01928.1| 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana]
Length = 702
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 146/334 (43%), Gaps = 20/334 (5%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y M+ F K D EK LF E R + ++T I C ++G +++F
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIK-PDNATFTTIISCAR--QNGVPKRAVEWFE 234
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M G D A++I ++ V +A L+ A + D F L+ +Y G
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ L + E MK + + I +++ + + W A +Y+ LI+ G P TYA
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP- 263
+++ AY R A ++ EM++KG V+ Y+++++M G + +A + MK
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNC 414
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDM 307
+ C+P+ W ++SL+ ++ + + + E T+VI Y A++ D
Sbjct: 415 ETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDD 474
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
V+ +++ G D G ++ V ++ E
Sbjct: 475 VVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEE 508
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 129/267 (48%), Gaps = 3/267 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G LD Y ++ G+ + AL + + + + P + ++Y +L L
Sbjct: 402 EMSERGHTLDLIAYGALVHGLVVAGEVD--VALTVRDKMMERGILPDA-NIYNVLMSGLC 458
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K GR + +M ++ + D V A+L+ F + A++LF+ E+G+ +
Sbjct: 459 KKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVV 518
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
++ Y + GM+ L + M N + + I++G+ K+ A++++ +
Sbjct: 519 ECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLM 578
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ + C P VT+ S+IN +CR G ++AEKVF EM+ GF+ VV Y+ ++ + K G++
Sbjct: 579 LKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKL 638
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A +M C PN +N L++
Sbjct: 639 TKACFFFEQMLINKCIPNDATFNYLVN 665
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D K+G F+++K KG L Y ++I +F + + ++L E +
Sbjct: 240 YNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMK 299
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G+ L++F ++ + G + + V M + ++NG +
Sbjct: 300 ERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVR 359
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ E I +G P + +Y +I+A+ + G Y +A ++ IEM ++G ++AY ++V
Sbjct: 360 EAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALV 419
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
G + A+ + KM +G P+ IYN LM GR +QL
Sbjct: 420 HGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQL 469
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 156/378 (41%), Gaps = 54/378 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++++K G + Y ++ AF K G E V L +E + R L + S ++ + D+
Sbjct: 260 FKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAV---SLQIFNGIIDA 316
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA-------- 121
K G E R M E G D + Y +LI S +V+ AEEL + A
Sbjct: 317 RFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPN 376
Query: 122 ---------------------------EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
E+G DL + LV + G V+ L V +
Sbjct: 377 KFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRD 436
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M + I V+++G K+ + AA ++ +++ Q P A++++ + R G
Sbjct: 437 KMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHG 496
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A+K+F ++G D VV ++M+ Y K G + DA+ +M P+ + Y+
Sbjct: 497 NLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYS 556
Query: 275 SLMDMHGRAKNLR----------------QLEKYTTVISAYNMAREFDMCVKFYNEFRMN 318
+++D + + +LR + +T++I+ + + + K + E R
Sbjct: 557 TIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSF 616
Query: 319 GGVIDRAMAGIMVGVFSK 336
G + I++G F K
Sbjct: 617 GFEPNVVTYTILIGYFCK 634
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 117/252 (46%), Gaps = 9/252 (3%)
Query: 32 FYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILK----FFRDMK 87
F +I D ++ F E S++ L+ S + +C SL K F + K MK
Sbjct: 68 FDQIHDP-RLGLNFFEWASKQSTLSNS---LDGFVCSSLLKLLARFRVFKEIENLLETMK 123
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEA-EEKGMLRDLEVFLKLVLMYIEEGMV 146
K ++ + +I ++A VK A EL+ + + D+ L+ + + G V
Sbjct: 124 SKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKV 183
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
E +V + M + ++ + C++ G K + E+ +GC+P V Y ++
Sbjct: 184 EIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTL 243
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+ YC+ G +A +F E++ KGF V Y +M+ + K G+ +L+ +MK +G
Sbjct: 244 IDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGL 303
Query: 267 EPNVWIYNSLMD 278
++ I+N ++D
Sbjct: 304 AVSLQIFNGIID 315
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 129/312 (41%), Gaps = 19/312 (6%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH-MYKILCDSL 70
+M + D+ +++ F + G+ ++ LF R +D + + M K C
Sbjct: 472 EMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYC--- 528
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G + L F+ M D Y+++I + +++ A +F +K ++
Sbjct: 529 -KYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNV 587
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ + G + + +V E M++ + +++ F K A +EQ
Sbjct: 588 VTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQ 647
Query: 191 LISQGCIPGQVTYASIINAYCR---IGLYSKAE--------KVFIEMQQKGFDKCVVAYS 239
++ CIP T+ ++N I + SK + F M G+D + AY+
Sbjct: 648 MLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYN 707
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
S++ + ++ A++L KM KG P+ + +L +HG R L+ + VI
Sbjct: 708 SILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIAL--LHGLCLEGR-LQDWNNVIPCN 764
Query: 300 NMAREFDMCVKF 311
R+ + VK+
Sbjct: 765 FNERQLQIAVKY 776
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 4/282 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KMK + + ++ F K+G ++ V F + + Y I+ D
Sbjct: 215 FSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAG---ARPTVFTYNIMIDC 271
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K G F +MK +G++ D Y S+I F + + F+E ++ D
Sbjct: 272 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 331
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + G + LE MK L + +V+ F K A+K Y
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G +P + TY S+I+A C+IG S A ++ EM Q G + VV Y++++
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 451
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLE 290
R+++A L KM G PN+ YN+L+ +AKN+ R LE
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E ++ F MK + L+ FA + + + FK+ G + + ++
Sbjct: 210 EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMI 269
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
+EG VE + E MK L +++GF K V +E++ C
Sbjct: 270 DCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE 329
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P +TY ++IN +C+ G + + EM+ G VV+YS++V + K G ++ A++
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
M+ G PN + Y SL+D + + NL
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 133/291 (45%), Gaps = 7/291 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +Y +MK G+ + Y +++AF K G ++ +++ R++ L P+ + Y L
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVD--MRRVGLVPNE-YTYTSL 408
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K G + + +M + G+ + Y +LI +K AEELF + + G+
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ +L + L+ +++ +++ LE++ +K + + + G AA
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V ++ G + Y ++++AY + G ++ + EM++ + VV + ++
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 247 KTGRIRDAMRLVAKMKPK-GCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
K + A+ ++ G + N I+ +++D G K+ Q+E TT+
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMID--GLCKD-NQVEAATTLF 636
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 117/284 (41%), Gaps = 4/284 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + +Y M+ G+V + Y +++A KIG+ L E ++ + Y
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT---Y 440
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D L + R E + F M G++ + + Y +LI F + A EL E +
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ DL ++ + +E V+ MK + + I +++ + K
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK-GFDKCVVAYSSMV 242
+ + +++ VT+ +I+ C+ L SKA F + G +++M+
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
K ++ A L +M KG P+ Y SLMD + + N+
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 125/274 (45%), Gaps = 8/274 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILC 67
+ KM +AG++ + Y ++ F K + ++ L E + R K DL T ++ LC
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG-LC 518
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
SL K A ++ +MKE GI + +Y +L+ ++ L E +E +
Sbjct: 519 -SLEKIEAAKVVMN---EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA-ELNISDCISCVIVNGFSKRRAYWAAVK 186
+ F L+ + +V K ++ + N L + I +++G K AA
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++EQ++ +G +P + Y S+++ + G +A + +M + G ++AY+S+V
Sbjct: 635 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLS 694
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+++ A + +M +G P+ + S++ H
Sbjct: 695 HCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKH 728
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 103/219 (47%), Gaps = 8/219 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+MK GI +S Y +M+A++K G+ + L L E ++LD+ + + +L D L
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTE--GLHLLDEMKELDIEVTVV-TFCVLIDGL 587
Query: 71 GKSGRAFEILKFF-RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ + + +F R + G+ + +++ ++I +V+ A LF++ +KG++ D
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ ++G V + L + + M + + +V G S A E
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
++I +G P +V S++ + +G +A +E+Q
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHYELGCIDEA----VELQS 742
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 8/271 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G+V D G Y I++A K +K + + + ++ P Y +
Sbjct: 255 FNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVE--PDGV-TYNAIIHG 311
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
SG E K FR M KG++ D ++S + S K AEE+F+ KG + D
Sbjct: 312 YSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPD 371
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC--VIVNGFSKRRAYWAAVKV 187
+ + L+ Y EG + SM + + +S+C C ++++ +KR A+ V
Sbjct: 372 IVSYSILLHGYATEGRFADMNNLFHSMADKGI-VSNC-HCINILISAHAKRGMMDEAMLV 429
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ ++ QG P VTY+++I+A+CR+G + A + F +M G + Y S++ +
Sbjct: 430 FTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCM 489
Query: 248 TGRIRDAMRLVAKMKPKGCE-PNVWIYNSLM 277
G + A +++M KG PN+ ++S++
Sbjct: 490 HGDLVKAKEFISEMMSKGLHRPNIVFFSSII 520
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 19/268 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKE 120
Y + SL R+ E L + M ++G P V + ++I F EV A LF E
Sbjct: 198 YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNE 257
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+KG++ D+ + +V + ++K V+ M + + I++G+S
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGH 317
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ + K++ ++ S+G IP VT++S +++ C+ G AE++F M KG +V+YS
Sbjct: 318 WKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSI 377
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR---------------AKN 285
++ Y GR D L M KG N N L+ H + +
Sbjct: 378 LLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQG 437
Query: 286 LR-QLEKYTTVISAY-NMAREFDMCVKF 311
+R + Y+T+ISA+ M R D KF
Sbjct: 438 VRPNVVTYSTLISAFCRMGRLADAMEKF 465
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 4/269 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M G+ D Y I+ + G ++ A +F + S+ L P T + SL
Sbjct: 291 RQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGL--IPD-TVTFSSFMSSL 347
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR+ + + F+ M KG + D Y+ L+ +A+ LF +KG++ +
Sbjct: 348 CKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNC 407
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
L+ + + GM+++ + V M+ + + +++ F + A++ + Q
Sbjct: 408 HCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQ 467
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC-VVAYSSMVAMYGKTG 249
+IS G P Y S+I+ +C G KA++ EM KG + +V +SS++ G
Sbjct: 468 MISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEG 527
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
R+ DA + + G P + +NSL+D
Sbjct: 528 RVMDAQDVFNLVIHIGDRPTIVTFNSLID 556
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 33/302 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF---------------------LEC 48
+ KM S G++ D+ + M + K G S+ +F
Sbjct: 325 FRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYAT 384
Query: 49 ESRKLDLTP-----------SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
E R D+ S+ H IL + K G E + F +M+ +G+ +
Sbjct: 385 EGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVT 444
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y++LI +F + + A E F + G+ + V+ L+ + G + K E + M
Sbjct: 445 YSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMM 504
Query: 158 NAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ L+ + + I++ A V+ +I G P VT+ S+I+ YC +G
Sbjct: 505 SKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 564
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
KA V M G + VV +++V+ Y K+G+I D + L +M K +P YN +
Sbjct: 565 EKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIV 624
Query: 277 MD 278
+D
Sbjct: 625 LD 626
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 121/305 (39%), Gaps = 39/305 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M GIV + C ++ A K G ++ +F E + + + + Y L +
Sbjct: 395 FHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVR---PNVVTYSTLISA 451
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ GR + ++ F M GI + +VY SLI F ++ A+E E KG+ R
Sbjct: 452 FCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRP 511
Query: 130 LEVFLK------------------------------------LVLMYIEEGMVEKTLEVV 153
VF L+ Y G +EK V+
Sbjct: 512 NIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVL 571
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
++M + + + +V+G+ K + ++ +++ + P VTY +++ R
Sbjct: 572 DAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRA 631
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G S A+K+F EM G + Y ++ + +A+ L K+ C+ ++ I
Sbjct: 632 GRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITIL 691
Query: 274 NSLMD 278
N++++
Sbjct: 692 NTMIN 696
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 107/268 (39%), Gaps = 2/268 (0%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M S GI ++ Y ++ F GD K E S+ L P+ I+ S
Sbjct: 465 FSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLH-RPNIVFFSSII-HS 522
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L GR + F + G + SLI + + +++ A + G+ D
Sbjct: 523 LCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 582
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ LV Y + G ++ L + M + ++ + ++++G + AA K++
Sbjct: 583 VVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFH 642
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++I G TY ++ CR L +A +F ++ + ++M+ K
Sbjct: 643 EMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVR 702
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R +A L A + G PNV Y ++
Sbjct: 703 RREEANDLFAAISTSGLVPNVSTYGVMI 730
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 184 AVKVYEQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC---VVAYS 239
AV V +S+ C+P ++Y ++I + C +A + M ++G +C VV+++
Sbjct: 178 AVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEG-GRCSPDVVSFN 236
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE--------- 290
+++ + K G + A L +M KG P+V YNS++D +A+ + + E
Sbjct: 237 TVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDK 296
Query: 291 -------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
Y +I Y+ + + K + + G + D
Sbjct: 297 GVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPD 336
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/159 (18%), Positives = 65/159 (40%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
KSG+ + L FR+M K + Y ++ A+++F E + G D++
Sbjct: 595 KSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDID 654
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + ++ + + + + I ++N K R A ++ +
Sbjct: 655 TYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAI 714
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+ G +P TY +I + G +A+ +F M++ G
Sbjct: 715 STSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSG 753
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 145/308 (47%), Gaps = 27/308 (8%)
Query: 6 KLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKI 65
KL Y + + G +L C +IGD+ + L + K P+ +Y
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVN------RIGDAFSLVILMV-----KSGYEPNVV-VYNT 181
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L D L K+G L+ +M++KG+ D Y +L+ A + ++ ++
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D+ F L+ +++++G +++ E+ + M + ++ ++ I+NG + A
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K ++ + S+GC P VTY ++I+ +C+ + + K+F M +GF+ + Y++++ Y
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------------LRQLEKYT 293
+ G++R A+ + M + P++ + L +HG N +R+ EKY
Sbjct: 362 CQVGKLRVALDIFCWMVSRRVTPDIITHCIL--LHGLCVNGEIESALVKFDDMRESEKYI 419
Query: 294 TVISAYNM 301
++ AYN+
Sbjct: 420 GIV-AYNI 426
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 103/217 (47%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y + + L K+ L+ F M++KGI D Y +LI ++ A L ++
Sbjct: 711 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 770
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++ + ++ F L+ +++EG + + + + M + + ++NGF
Sbjct: 771 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 830
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++ ++S+GC P VTY ++I +C+ K+F EM +G Y+++
Sbjct: 831 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 890
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ Y + G++ A ++ +M G P++ YN L+D
Sbjct: 891 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 927
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 128/285 (44%), Gaps = 3/285 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ Y KM++ GI D + ++ F + S AL L + KL PS + +L
Sbjct: 624 IYLYHKMENLGISHDLYSFTILIHCFCRC--SRLSLALALLGKMMKLGFRPSIVTLGSLL 681
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ + R E + M G + + +Y ++I ++ A E+F E+KG+
Sbjct: 682 -NGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI 740
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ G ++ M +++ + +++ F K A
Sbjct: 741 RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 800
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+Y+++I + +P TY S+IN +C G A+ +F M KG VV Y++++ +
Sbjct: 801 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC 860
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
K+ R+ D M+L +M +G + + YN+L+ + +A L +K
Sbjct: 861 KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 905
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L KS R + +K F +M +G++ D Y +LI + ++ VA+++F
Sbjct: 852 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 911
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G+ D+ + L+ G +EK L +VE ++ +E+++ +I+ G +
Sbjct: 912 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLK 971
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A ++ L +G P + Y ++I+ CR GL +A+K+ M++ GF
Sbjct: 972 EAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 1020
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 122/287 (42%), Gaps = 7/287 (2%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + + M G V + Y ++ K D +F E + + + Y
Sbjct: 691 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIR---ADAVTY 747
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEA 121
L L SGR + + RDM ++ I DP+V + +LI +F + A L+KE
Sbjct: 748 NTLISGLSNSGRWTDAARLLRDMVKRKI--DPNVIFFTALIDTFVKEGNLLEARNLYKEM 805
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ ++ ++ + L+ + G + + + M + ++ GF K +
Sbjct: 806 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 865
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+K++ ++ QG + TY ++I+ YC+ G + A+KVF M G +V Y+ +
Sbjct: 866 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 925
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ G+I A+ +V ++ + ++ YN ++ R L++
Sbjct: 926 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 972
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 125/289 (43%), Gaps = 5/289 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L + M+ GI D+ Y ++ G A L + RK+D + +
Sbjct: 726 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID---PNVIFF 782
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D+ K G E +++M + ++ + Y SLI F + A+ +F
Sbjct: 783 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 842
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYW 182
KG D+ + L+ + + VE +++ M L + D + +++G+ +
Sbjct: 843 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL-VGDAFTYNTLIHGYCQAGKLN 901
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A KV+ +++ G P VTY +++ C G KA + ++Q+ D ++ Y+ ++
Sbjct: 902 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 961
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+T ++++A L + KG +P+ Y +++ R R+ +K
Sbjct: 962 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 1010
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 90/194 (46%), Gaps = 2/194 (1%)
Query: 95 PSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
PS+ + ++ A + + + L+ + E G+ DL F L+ + + L +
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ M S ++NGF + + AV + + + G +P V Y ++IN C+
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
+ A +VF M++KG V Y+++++ +GR DA RL+ M + +PNV
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 273 YNSLMDMHGRAKNL 286
+ +L+D + NL
Sbjct: 782 FTALIDTFVKEGNL 795
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 2/230 (0%)
Query: 50 SRKLDLTPSSTHMYK--ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFAS 107
S+K++L S +Y IL + R L M + G + SL+ F
Sbjct: 94 SQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCL 153
Query: 108 IAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI 167
+ + A L + G ++ V+ L+ + G + LE++ M+ L
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT 213
Query: 168 SCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
++ G + A ++ ++ + P VT+ ++I+ + + G +A++++ EM
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Q D V Y+S++ GR+ DA + M KGC PNV YN+L+
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLI 323
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 5/259 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M I D + +++ F K G+ ++ L+ E +D P++ Y + + L
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD--PNNV-TYNSIINGLCM 293
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR ++ K F M KG + Y +LI F V +LF+ +G D+
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ Y + G + L++ M + + C++++G +A+ ++ +
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G V Y +I+ C+ KA ++F + +G Y+ M+ K G R
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473
Query: 253 DAMRLVAKMKPKG--CEPN 269
+A L+ +MK +G C+ N
Sbjct: 474 EADELIRRMKEEGIICQMN 492
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 110/242 (45%), Gaps = 4/242 (1%)
Query: 43 ALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI 102
A L CE + PS ++L + K + ++ + M+ GI D + LI
Sbjct: 588 AFSLFCEMLQSRPIPSIVDFTRVL-TVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 646
Query: 103 CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN 162
F + + +A L + + G + L+ + + ++ + +V+SM
Sbjct: 647 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 706
Query: 163 ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
+ I ++NG K R A++V+ + +G VTY ++I+ G ++ A ++
Sbjct: 707 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 766
Query: 223 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---M 279
+M ++ D V+ +++++ + K G + +A L +M + PNV+ YNSL++ +
Sbjct: 767 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 826
Query: 280 HG 281
HG
Sbjct: 827 HG 828
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
++ +I+ +CR S A V +M + G++ +V + S++ + RI DA LV M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKN 285
G EPNV +YN+L+D G KN
Sbjct: 168 VKSGYEPNVVVYNTLID--GLCKN 189
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 111/288 (38%), Gaps = 38/288 (13%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ K G+ L E E + L + Y L L SGR + + R
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLG---ADVVTYNTLLTGLCYSGRWSDAARMLR 235
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA----------------------- 121
DM ++ I D + +LI F + A+EL+KE
Sbjct: 236 DMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 122 ------------EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
KG ++ + L+ + + MV++ +++ + M N
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++G+ + A+ ++ ++S+ P +T+ +++ C G A F +M++
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRES 415
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+VAY+ M+ K ++ A L ++ +G +P+ Y ++
Sbjct: 416 EKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 139/289 (48%), Gaps = 9/289 (3%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCDSL 70
M + G+ L++ Y ++ A K G + ++ E S+ K D+ ++ +Y L
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY-----GL 487
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+ + E L +RDM +G++ + Y +LI +F + ++ A++L E +G D
Sbjct: 488 CKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDN 547
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + G EK L ++E M E+ S +++N F + A++
Sbjct: 548 ITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRD 607
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I +G P VTY S+IN C++G + +A +F +Q KG V Y+++++ Y G
Sbjct: 608 MIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
DA +L+ K G PN ++ L++ KN E++T ++ +
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILINYF--VKNNSDSEQFTILMGNW 714
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 156/383 (40%), Gaps = 55/383 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M S GI + +M+AF + + + +L + K P+S +Y++L +
Sbjct: 188 FYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRD--MTKHGCVPNSI-IYQMLIHA 244
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF----------- 118
L ++ R E +K +M G D + +I + A +L
Sbjct: 245 LSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTAD 304
Query: 119 ---------------KEAEEKGMLRDLE-----VFLKLVLMYIEEGMVEKTLEVV-ESMK 157
K E + ML + ++ L+ Y+ G E+ +++ ++M
Sbjct: 305 ALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMV 364
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
A ++++G K+ +A++ ++++ +G P +TY +I+ +C+ G +
Sbjct: 365 IAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFE 424
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A KV M KG V Y+ ++ K G+I+DA+++ +M KGC+P+++ +NSL
Sbjct: 425 EASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL- 483
Query: 278 DMHGRAKNLRQLE------------------KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
++G KN + E Y T+I A+ K E R G
Sbjct: 484 -IYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRG 542
Query: 320 GVIDRAMAGIMVGVFSKLSQIEE 342
+D ++ K E+
Sbjct: 543 CPLDNITYNGLIKALCKTGATEK 565
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 95/205 (46%), Gaps = 11/205 (5%)
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
++G + VY LI ++ E K+ ++L K+ +++G + +F+ ++ Y + G+
Sbjct: 87 QRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPG 146
Query: 148 KTLEVVESMKN-----AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
+ ++ M + + ++V G + A V+ ++S+G P T
Sbjct: 147 QATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPK----VAPNVFYDMLSRGISPTVYT 202
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
+ ++ A+C + A + +M + G + Y ++ + R+ +AM+L+ +M
Sbjct: 203 FGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMF 262
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLR 287
GCEP+V +N + +HG K R
Sbjct: 263 LMGCEPDVQTFNDV--IHGLCKAGR 285
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 93/220 (42%), Gaps = 40/220 (18%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ G LD+ Y +++A K G +EK L + ++ + +S + IL +S
Sbjct: 537 EMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCN---ILINSFC 593
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
++G+ + L+F RDM ++G+ D Y SLI + + A LF + KG+ D
Sbjct: 594 RTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAV 653
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ Y EG+ A ++ +
Sbjct: 654 TYNTLISRYCYEGLFND-----------------------------------ACQLLFKG 678
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+S G IP ++T++ +IN + + S +E+ I M GF
Sbjct: 679 VSNGFIPNEITWSILINYFVKNN--SDSEQFTILMGNWGF 716
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 133/279 (47%), Gaps = 10/279 (3%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
+ S + +++MK + Y ++ ++K+G EK LF E ++ +P+ +
Sbjct: 249 NDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM--KRAGCSPT-VYT 305
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L LGK+GR E F++DM G+ D +L+ + V EEL
Sbjct: 306 YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV---EELTNVFS 362
Query: 123 EKGMLRDLEVFLK----LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E GM R + + ++ + V + + MK ++ S+ ++++G+ K
Sbjct: 363 EMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT 422
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A+ + E++ +G P Y S+INA + Y A+++F E+++ + Y
Sbjct: 423 NRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVY 482
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ M+ +GK G++ +A+ L +MK +G P+V+ YN+LM
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 4 QSKLH------YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP 57
+SK H +++KMK+ + Y +++ + K EK L E + + P
Sbjct: 385 ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++ Y L ++LGK+ R + F+++KE VYA +I F ++ A +L
Sbjct: 445 AA---YCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK----NAELNISDCISCVIVN 173
F E + +G D+ + L+ ++ GM+ + ++ M+ A++N + +I+N
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHN----IILN 557
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
GF++ A++++E + G P VTY +++ + G++ +A ++ EM+ KGF+
Sbjct: 558 GFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEY 617
Query: 234 CVVAYSSMVAMYGKTGRIRD 253
+ YSS++ G +D
Sbjct: 618 DAITYSSILDAVGNVDHEKD 637
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 104/230 (45%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
K D S Y IL D K+ R + L +M EKG P+ Y SLI +
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+ A+ELFKE +E V+ ++ + + G + + +++ MKN +
Sbjct: 461 EAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++G K A + ++ GC ++ I+N + R G+ +A ++F ++ G
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
V Y++++ + G +A R++ +MK KG E + Y+S++D G
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVG 630
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 156/350 (44%), Gaps = 21/350 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E +++ + + ++++A + K ++F + + RK T SST+ IL L
Sbjct: 151 EVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPT-SSTYNSVILM--L 207
Query: 71 GKSGRAFEILKFFRDM-KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G+ ++ + + +M E D Y++LI S+ + A LF E ++ M
Sbjct: 208 MQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPT 267
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+++ L+ +Y + G VEK L++ E MK A + + ++ G K A Y+
Sbjct: 268 EKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYK 327
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKT 248
++ G P V +++N ++G + VF EM VV+Y++++ A++
Sbjct: 328 DMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESK 387
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----KNLRQLEK------------Y 292
+ + KMK P+ + Y+ L+D + + K L LE+ Y
Sbjct: 388 AHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAY 447
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++I+A A+ ++ + + E + N G + + +M+ F K ++ E
Sbjct: 448 CSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE 497
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 119/272 (43%), Gaps = 32/272 (11%)
Query: 80 LKFFR-DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL------EV 132
++FF+ K + D S Y +LI + E ++ E+++ +E ++R+ V
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLI---RCLEEARLYGEMYRTIQE--VVRNTYVSVSPAV 164
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+LV MV K L V K + + ++ + + +VY ++
Sbjct: 165 LSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMC 224
Query: 193 SQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
++G C P +TY+++I++Y ++G A ++F EM+ Y++++ +Y K G++
Sbjct: 225 NEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKV 284
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
A+ L +MK GC P V+ Y L+ G+A + D F
Sbjct: 285 EKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV-------------------DEAYGF 325
Query: 312 YNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
Y + +G D ++ + K+ ++EEL
Sbjct: 326 YKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 145/308 (47%), Gaps = 27/308 (8%)
Query: 6 KLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKI 65
KL Y + + G +L C +IGD+ + L + K P+ +Y
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVN------RIGDAFSLVILMV-----KSGYEPNVV-VYNT 181
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L D L K+G L+ +M++KG+ D Y +L+ A + ++ ++
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D+ F L+ +++++G +++ E+ + M + ++ ++ I+NG + A
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K ++ + S+GC P VTY ++I+ +C+ + + K+F M +GF+ + Y++++ Y
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------------LRQLEKYT 293
+ G++R A+ + M + P++ + L +HG N +R+ EKY
Sbjct: 362 CQVGKLRVALDIFCWMVSRRVTPDIITHCIL--LHGLCVNGEIESALVKFDDMRESEKYI 419
Query: 294 TVISAYNM 301
++ AYN+
Sbjct: 420 GIV-AYNI 426
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 2/230 (0%)
Query: 50 SRKLDLTPSSTHMYK--ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFAS 107
S+K++L S +Y IL + R L M + G + SL+ F
Sbjct: 94 SQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCL 153
Query: 108 IAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI 167
+ + A L + G ++ V+ L+ + G + LE++ M+ L
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT 213
Query: 168 SCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
++ G + A ++ ++ + P VT+ ++I+ + + G +A++++ EM
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Q D V Y+S++ GR+ DA + M KGC PNV YN+L+
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLI 323
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 5/259 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M I D + +++ F K G+ ++ L+ E +D P++ Y + + L
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD--PNNV-TYNSIINGLCM 293
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR ++ K F M KG + Y +LI F V +LF+ +G D+
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ Y + G + L++ M + + C++++G +A+ ++ +
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G V Y +I+ C+ KA ++F + +G Y+ M+ K G R
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473
Query: 253 DAMRLVAKMKPKG--CEPN 269
+A L+ +MK +G C+ N
Sbjct: 474 EADELIRRMKEEGIICQMN 492
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
++ +I+ +CR S A V +M + G++ +V + S++ + RI DA LV M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKN 285
G EPNV +YN+L+D G KN
Sbjct: 168 VKSGYEPNVVVYNTLID--GLCKN 189
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 111/288 (38%), Gaps = 38/288 (13%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ K G+ L E E + L + Y L L SGR + + R
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLG---ADVVTYNTLLTGLCYSGRWSDAARMLR 235
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA----------------------- 121
DM ++ I D + +LI F + A+EL+KE
Sbjct: 236 DMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 122 ------------EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
KG ++ + L+ + + MV++ +++ + M N
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++G+ + A+ ++ ++S+ P +T+ +++ C G A F +M++
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRES 415
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+VAY+ M+ K ++ A L ++ +G +P+ Y ++
Sbjct: 416 EKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 12/291 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL---DLTPSST 60
Q + EK+ + G Y ++ K+G E+ L RK+ TP
Sbjct: 51 QEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL-----RKIVDNGCTPDVV 105
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y L D LGK R+FE K F++M +G+ D Y +LI ++ A ++K
Sbjct: 106 -TYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKT 164
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+G + D+ ++ + G + + + +SM+ L ++ + +++G K R
Sbjct: 165 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 224
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A+++ Q+ C P +TY +I+ C+ G + A F EM + G V Y+
Sbjct: 225 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNI 284
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+++ + K G A + M C PNV Y +L+ G K RQL K
Sbjct: 285 LISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLIS--GLCKR-RQLTK 332
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 9/266 (3%)
Query: 19 VLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
++D+GC Y +++ K S + LF E SR L L T Y L L +
Sbjct: 95 IVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLAL---DTVCYTALIRGLLQ 151
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G+ + ++ M +G + D +++I + A +FK E +G+ + V
Sbjct: 152 AGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVV 211
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + ++ LE++ MK A ++++G K AA +++++
Sbjct: 212 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEML 271
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
GC P TY +I+ +C+ G A VF +M VV Y ++++ K ++
Sbjct: 272 EAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLT 331
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMD 278
A MK +GC P+ ++Y+SL+D
Sbjct: 332 KASLYYQHMKERGCPPDSFVYSSLVD 357
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%)
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F L+ ++ GM+ + + + I IV+ +K + AV + E++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ GC P TY +++N C++G +A + ++ G VV Y+S++ GK R
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A +L +M +G + Y +L+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALI 146
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++NG K A + ++ + GC TY +I++ + +A + ++
Sbjct: 4 ILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITAN 63
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G + Y++++ K GR+ +A+ L+ K+ GC P+V Y SL+D G+ K R
Sbjct: 64 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKK--RSF 121
Query: 290 EKY 292
E Y
Sbjct: 122 EAY 124
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
T++ +IN + G+ +A + E G + Y+++V K +I++A+ L+ K+
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 262 KPKGCEPNVWIYNSLMD 278
GC P + YN+L++
Sbjct: 61 TANGCTPTIATYNALLN 77
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 121/239 (50%), Gaps = 8/239 (3%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEI-LKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
L P++ Y + D+ GK G L +FR M + G+ D + SL+ + + + ++
Sbjct: 12 LRPTTVS-YNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAACSRVGHLED 70
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A +F E G+ RD+ + + + G +E ++V+ M+ + + +++
Sbjct: 71 ARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTLID 130
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G+SK Y A+K+ E++ S +V Y +++ Y + G Y++ V EM++ G +K
Sbjct: 131 GYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEK 190
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNL 286
V Y+S++ YGK GR+ LV M+ +G P+V Y++L+D MHG A N+
Sbjct: 191 DTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNV 249
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 132/278 (47%), Gaps = 3/278 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y+ +M G+ D + ++ A ++G E A+F E + + Y
Sbjct: 37 LGYFRQMLKDGLCPDRKTFNSLLAACSRVGHLEDARAVFDEMIHLGIG---RDIYTYNTF 93
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D++ K G ++ DM+ KG+ + Y++LI ++ + + + A +L ++ + +
Sbjct: 94 IDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRI 153
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ +Y++ G + V + M+ + ++NG+ K+
Sbjct: 154 QLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSI 213
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + + +G P +TY+++I+ Y + G++ A V+++ ++ G VV +SS +
Sbjct: 214 LVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLA 273
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
K G I A+ L+ M G +PNV YN+++D G++K
Sbjct: 274 KNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKSK 311
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWA-AVKVYEQLISQGCIPGQVTYASIINAY 210
V+ESMK A L + +++ K + + Q++ G P + T+ S++ A
Sbjct: 3 VLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAAC 62
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
R+G A VF EM G + + Y++ + K G + AM+++ M+ KG +PNV
Sbjct: 63 SRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNV 122
Query: 271 WIYNSLMDMHGRAKNLRQLEKY 292
Y++L+D + + LEKY
Sbjct: 123 VTYSTLIDGYSK------LEKY 138
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 128/316 (40%), Gaps = 55/316 (17%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
EKMKS I LD CY ++ + K G ++A + E E ++ T Y L +
Sbjct: 146 EKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIE---KDTVTYNSLINGY 202
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK GR + +DM+++G+ Y++LI ++ A ++ + +E G+ D+
Sbjct: 203 GKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDV 262
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK------------- 177
+F + + G++E L ++ M + + I++ F K
Sbjct: 263 VLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKSKVMMEDDSEVGD 322
Query: 178 ------------------------------RRA--YWAAVKVYEQLISQGCIPGQVTYAS 205
RR+ + ++++++++ QG P VT+++
Sbjct: 323 MGIVGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSA 382
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCV--VAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
I+NA R + A + +E Q + FD V VAY +V G A L ++
Sbjct: 383 ILNACSRCNSFEDA-ALLLE-QLRLFDNFVYGVAYGLLV---GSREVWSQAQSLFNQLGR 437
Query: 264 KGCEPNVWIYNSLMDM 279
+ YN+L D+
Sbjct: 438 MDSPTSSAFYNALTDV 453
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 106/215 (49%), Gaps = 4/215 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + SL + L++ M G D + SLI + +V VA +LF +
Sbjct: 14 YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G +D+ + L+ + E G +++ +E+ M ++++ +V G K
Sbjct: 74 LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHMY----AALVKGLCKAGRGE 129
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ + ++ G P YA++++ C +AE++ EM +KG CVV ++++
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 189
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y K GR+ DA+R++ MK +GC+PNVW YN+L+
Sbjct: 190 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 224
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 148/361 (40%), Gaps = 58/361 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++KM G D Y ++E F + G ++ LF E + + HMY L
Sbjct: 69 FDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDM-------HMYAALVKG 121
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM--- 126
L K+GR E L R MKE G YA+++ + K AEE+ +E EKG+
Sbjct: 122 LCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPC 181
Query: 127 --------------------LRDLEV------------FLKLVLMYIEEGMVEKTLEVVE 154
LR LE+ + LV + EG V K + ++
Sbjct: 182 VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLN 241
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M+ +N +++ G +A ++ + G I Q TY ++INA C+ G
Sbjct: 242 KMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDG 301
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A +F ++ +G V ++S++ K+G++ A + + KM GC P+ + Y+
Sbjct: 302 RTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYS 361
Query: 275 SLMD----MHGRAKNL----RQLEK--------YTTVISAYNMAREFDMCVKFYNEFRMN 318
S ++ M G + L L+K YT VI R + + + + E +
Sbjct: 362 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 421
Query: 319 G 319
G
Sbjct: 422 G 422
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 124/290 (42%), Gaps = 12/290 (4%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + Y L ++L K GR + F ++ +GI + + SLI +V +A +
Sbjct: 285 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKF 344
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
++ G D + + + ++ L + M ++ S ++++ K
Sbjct: 345 LEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLK 404
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
R Y + + +++S GC P VTY + + AYC G ++AE V +EM + G +A
Sbjct: 405 ERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 464
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTT--- 294
Y++++ + G+ A+ ++ +M PN + Y L+ R + + + T
Sbjct: 465 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGV 524
Query: 295 --VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
I ++ FD+ K NEF N G + G FS+ + EE
Sbjct: 525 WKAIELTDVFGLFDVMKK--NEFLPNSGTYSSILEG-----FSEDGRTEE 567
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 115/306 (37%), Gaps = 40/306 (13%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L G+ + + M+ G+ D Y LI ++ A L + E
Sbjct: 220 YNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 279
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G++ D + L+ ++G ++ + +S++ + + ++NG K
Sbjct: 280 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVD 339
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRI-----GL---------------------- 215
A K E+++S GC P TY+S I C++ GL
Sbjct: 340 IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 399
Query: 216 --------YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
Y + + EM G + VV Y++ + Y GR+ +A ++ +M G
Sbjct: 400 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 459
Query: 268 PNVWIYNSLMDMHGRAKNLRQ----LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
+ YN+LMD H L++ T+V S N F + ++ R+ V+
Sbjct: 460 VDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF-ILLRHLVRMRLVEDVLP 518
Query: 324 RAMAGI 329
AG+
Sbjct: 519 LTPAGV 524
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 131/346 (37%), Gaps = 57/346 (16%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S M+ G++ D Y ++ A K G +++ +LF E+R + P++ +
Sbjct: 269 ESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR--GIKPNAV-TF 325
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI------------CSF------ 105
L + L KSG+ KF M G D Y+S I SF
Sbjct: 326 NSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 385
Query: 106 -----ASIAEVKVAEELFKEAE------------EKGMLRDLEVFLKLVLMYIEEGMVEK 148
+++ V +L KE G D+ + + Y EG + +
Sbjct: 386 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 445
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
V+ M + + +++G + AV + +Q+ S +P Q TY ++
Sbjct: 446 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 505
Query: 209 AYCRI------------GLYSKAE-----KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
R+ G++ E +F M++ F YSS++ + + GR
Sbjct: 506 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 565
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+A LV+ MK N IY +L+ ++K R L+ + V S
Sbjct: 566 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSK--RYLDAWVLVCS 609
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 63/152 (41%), Gaps = 31/152 (20%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ +R +A++ ++ G P T+ S+I YCR A +F +M +G
Sbjct: 17 VIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRG 76
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVA------------------------------- 259
F + VV+Y++++ + +TGRI +A+ L
Sbjct: 77 FAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHMYAALVKGLCKAGRGEEGLLMLR 136
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+MK G P+ Y +++D + ++ E+
Sbjct: 137 RMKELGWRPSTRAYAAVVDFRCWERKAKEAEE 168
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 133/289 (46%), Gaps = 36/289 (12%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++ + + LC +GK +AF+I+K M KG + D S Y+ +I +V+ A L
Sbjct: 422 NTANFARCLC-GMGKFDKAFQIIKL---MMRKGFVPDTSTYSKVITFLCEAMKVEKAFLL 477
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F+E + G++ D+ + L+ + + G++E+ + M++ + S +++ + K
Sbjct: 478 FQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLK 537
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM----------- 226
+ A ++ +++ GC P +TY+++++ C+ G KA +V+ +M
Sbjct: 538 TKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDF 597
Query: 227 -----QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH- 280
VV Y +++ K ++ DA L+ M GCEPN IY++L+D
Sbjct: 598 YFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFC 657
Query: 281 --GRAKN-------------LRQLEKYTTVISAYNMAREFDMCVKFYNE 314
G+ N L + YT++I A R D+ +K ++
Sbjct: 658 KVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQ 706
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 167/399 (41%), Gaps = 70/399 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS----------- 58
+++MKS G++ D Y ++++F K+G E+ + F E ES + +PS
Sbjct: 478 FQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMES--VGCSPSVVTYTALLHAY 535
Query: 59 -----------------------STHMYKILCDSLGKSG---RAFEILK----------- 81
+T Y L D L K+G +A E+
Sbjct: 536 LKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGS 595
Query: 82 --FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+F I + Y +LI +V A+EL G + ++ L+
Sbjct: 596 DFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDG 655
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ + G ++ EV M + +++ K R A+KV Q++ C P
Sbjct: 656 FCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPN 715
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY ++I+ CRIG KA K+ M+++G + VV Y+S++ GK+G++ +++L
Sbjct: 716 VVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFT 775
Query: 260 KMKPKGCEPNVWIYNSLMD----------MHGRAKNLRQ------LEKYTTVISAYNMAR 303
+M +GC PN Y L++ H ++Q ++ Y +V+ + ++
Sbjct: 776 QMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SK 833
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+F + E +G V + G+++ FSK ++E+
Sbjct: 834 KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEK 872
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 151/379 (39%), Gaps = 69/379 (18%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC-------------ESRKLDLT 56
+ +M AG ++ Y +++ K G+S+K ++ + E D
Sbjct: 548 FHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSI 607
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
+ Y L D L K+ + + + M G + +Y +LI F + ++ A+E
Sbjct: 608 APNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQE 667
Query: 117 LFKEAEEKGML----------------RDLEVFLKLVLMYIEE----------------- 143
+F + G L R L++ +K++ +E
Sbjct: 668 VFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLC 727
Query: 144 --GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
G +K L+++ M+ N + +++G K +++++ Q+I+QGC P V
Sbjct: 728 RIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYV 787
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY +IN C GL +A + EM+Q + K V Y S+V + K + ++ L+ ++
Sbjct: 788 TYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEEL 845
Query: 262 KPKGCEPNVWIYNSLMDMHGRAK-------------------NLRQLEKYTTVISAYNMA 302
+ G +Y L+D +A N+ + YT++I A +A
Sbjct: 846 ESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLA 905
Query: 303 REFDMCVKFYNEFRMNGGV 321
+ + + Y+E G V
Sbjct: 906 SQLEKAFELYSEITRKGVV 924
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A KVYE++++ C+ +V A+ C +G + KA ++ M +KGF YS ++
Sbjct: 404 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVIT 463
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ ++ A L +MK G P+V+ Y L+D
Sbjct: 464 FLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILID 498
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 121/272 (44%), Gaps = 23/272 (8%)
Query: 19 VLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+L+S C Y +++ +IG+ +K L E R + + Y L D LGK
Sbjct: 707 MLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCN---PNVVTYTSLIDGLGK 763
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
SG+ L+ F M +G + Y LI + + A L E ++ + ++
Sbjct: 764 SGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQG 823
Query: 133 FLKLVLMYIEEGMVEK---TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ +V +G +K +L ++E +++ + + ++++ FSK A+++++
Sbjct: 824 YCSVV-----QGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHK 878
Query: 190 QLI---SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ S I + TY S+I A C KA +++ E+ +KG + A+ ++
Sbjct: 879 EMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLI 938
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K + +A++L M +G W N+ D
Sbjct: 939 KVNKWNEALQLCYSMCDEGVN---WQSNNSFD 967
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 81/208 (38%), Gaps = 6/208 (2%)
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
C G +A E L +D G + Y +L+ A+ ++ + + KE E G
Sbjct: 182 CCRHGAWAKALEELGRLKDF---GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGF 238
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D +EG L ++E + + + +++G + + A+
Sbjct: 239 CTDKFTVGCFAQALCKEGRWSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAIS 295
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ CIP VTY +++ + + +++ M +G + ++S+V Y
Sbjct: 296 FLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYC 355
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
A +L+ +M GC P +YN
Sbjct: 356 NARDYPYAYKLLNRMAGCGCPPGYVVYN 383
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 148/333 (44%), Gaps = 18/333 (5%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S L E M G D + ++ K D + A FL+ RK+ SS Y
Sbjct: 392 SALSLLETMIKRGYCPDMATHSMLINELCK-ADKIQEAQEFLQGMDRKISSRSSSCFSYN 450
Query: 65 ILCDSLGKSGRAFEILKFFRDM-KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L +SL K+ + + F M E+ + D Y+ LI F I E+ AE+L+K+ +
Sbjct: 451 SLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 510
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ ++ + + + +G + V E M A + +++GFS R +
Sbjct: 511 LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQ 570
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +++E +IS+GC P VTY +++ C+ +A ++F +M ++G D V Y++++
Sbjct: 571 AHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLY 630
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNLRQLE------- 290
+ G+I A+ + +M KG +P+V YN L+ G AK L Q+
Sbjct: 631 GFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKP 690
Query: 291 ---KYTTVISAYNMAREFDMCVKFYNEFRMNGG 320
+ +I + A+ D V+ + + G
Sbjct: 691 DTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHG 723
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 4/220 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M +AG D Y ++ F ++ LF SR P++ Y L
Sbjct: 540 YEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR--GCRPNAV-TYNCLLHG 596
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K + E + FR M E+G D Y +L+ F ++ +++ A E+F E KG D
Sbjct: 597 LCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD 656
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G + ++ + M + + ++++G SK + AV+V+E
Sbjct: 657 VVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFE 716
Query: 190 QL-ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
++ GC P VTY S+I C S+A KVF E+ +
Sbjct: 717 RMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDR 756
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 131/289 (45%), Gaps = 15/289 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+EKM + G+V + Y ++++ +S++ F E + PSST +Y+ + +
Sbjct: 152 FEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDK--GFKPSST-LYQKVTEC 208
Query: 70 LGKSGRAFEILKFF-RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L +G+ E + F RD+ EK + + + +L+ +F + A +LF+ + G
Sbjct: 209 LKATGKEGEFSRVFGRDL-EKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKP 267
Query: 129 DLEVFLKLVLMYIE-EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK----RRAYWA 183
D ++ +VL + + E + E +E ++ +++ ++G K +A+ A
Sbjct: 268 DATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEA 327
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+ E L S Q Y +I G KAE+ +E+ + S++
Sbjct: 328 CRTMQESLSSS-----QPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQ 382
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
K GR+ A+ L+ M +G P++ ++ L++ +A +++ +++
Sbjct: 383 ELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEF 431
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 130/305 (42%), Gaps = 18/305 (5%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
NS + ++ +M G S Y ++ E G + + +F R L+ +
Sbjct: 179 NSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVF----GRDLEKRVAVEM 234
Query: 62 MYK-ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
M K L + +A E K FR M + G D ++Y+ ++ + + + A +LF E
Sbjct: 235 MLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLE 294
Query: 121 --AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK---NAELNISDCISCVIVNGF 175
E K L ++ + + + G +E+ E +M+ ++ + D + +++
Sbjct: 295 MAVESKAPLNNV-AWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESG 353
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+A A +++ + I P T S+I C+ G A + M ++G+ +
Sbjct: 354 RIDKAEEACLEIAGRNIQ----PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDM 409
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPK--GCEPNVWIYNSLMDMHGRAKNLRQ-LEKY 292
+S ++ K +I++A + M K + + YNSL++ +AK + Q +
Sbjct: 410 ATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIF 469
Query: 293 TTVIS 297
+T++S
Sbjct: 470 STMVS 474
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 61/151 (40%), Gaps = 35/151 (23%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+++ + R A +V+E++++QG +P TYA ++ + C +A + F EM KG
Sbjct: 135 LLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKG 194
Query: 231 FDKCVVAYSSMVAMYGKTGR-------------------------------IRD----AM 255
F Y + TG+ I+D A
Sbjct: 195 FKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEAS 254
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+L M GC+P+ IY+ ++ H + +NL
Sbjct: 255 KLFRAMVKSGCKPDATIYSYMVLAHCKLENL 285
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 113/277 (40%), Gaps = 25/277 (9%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L + + + F M +G++ + YA L+ S A F E
Sbjct: 132 YNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMV 191
Query: 123 EKGMLRDLEVFLKLVLMYIEEGM-----------VEKTLEVVESMKNAELNISDCISCVI 171
+KG ++ K+ G +EK + V +K A ++
Sbjct: 192 DKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKA----------LL 241
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ-QKG 230
VN + +A A+ K++ ++ GC P Y+ ++ A+C++ +A K+F+EM +
Sbjct: 242 VNFVIQDKAIEAS-KLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESK 300
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
VA+++ ++ K+G+I A M+ + + +Y+ L+ + + + + E
Sbjct: 301 APLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ-ESLSSSQPVYDMLIRLLIESGRIDKAE 359
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
+ I+ N+ C E G +D A++
Sbjct: 360 EACLEIAGRNIQPSSGTCHSVIQEL-CKAGRVDSALS 395
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 147/294 (50%), Gaps = 12/294 (4%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL---CD 68
KMK GI + Y I+ F K G +E AA + E++++ T +++ KI+ C
Sbjct: 369 KMKEEGIEMSLVTYSVIVGGFSKAGHAE--AADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ RA ++ R+M+E+GI ++Y +++ + +A+ K +FK +E G
Sbjct: 427 TCNME-RAEALV---REMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ +Y + G + K LEV MK + + +++NGF K + + A V+
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E ++ +G P + Y +II+A+C +G +A + EMQ+ + ++ Y K+
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
G +R ++ + M+ GC P V +N L++ G + RQ+EK ++ +A
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLIN--GLVEK-RQMEKAVEILDEMTLA 653
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 116/254 (45%), Gaps = 3/254 (1%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
+ I+ + K GD + +F R+ P+ H + L + L + + + ++
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMM--RRCGCVPT-VHTFNGLINGLVEKRQMEKAVEIL 647
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+M G+ + Y ++ +AS+ + A E F + +G+ D+ + L+ +
Sbjct: 648 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKS 707
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G ++ L V + M + + + ++++G+++R W A + +Q+ +G P TY
Sbjct: 708 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 767
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
S I+A + G ++A + EM+ G + Y++++ + + A+ +MK
Sbjct: 768 TSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA 827
Query: 264 KGCEPNVWIYNSLM 277
G +P+ +Y+ L+
Sbjct: 828 MGIKPDKAVYHCLL 841
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 147/332 (44%), Gaps = 23/332 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTHMYKILCDSL 70
MK G+ + Y ++ F K+ D A+F + E K D+ + ++ C +
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN-NIISAFC-GM 567
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G RA + +K + ++ + + +I +A +++ + E+F G + +
Sbjct: 568 GNMDRAIQTVKEMQKLRHRPTTR---TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTV 624
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +E+ +EK +E+++ M A ++ ++ I+ G++ A + + +
Sbjct: 625 HTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTR 684
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L ++G TY +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 685 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 744
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLE---------KYTT 294
+ +A L+ +MK +G +P++ Y S + DM+ + + ++E YTT
Sbjct: 745 VWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 804
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
+I + A + + Y E + G D+A+
Sbjct: 805 LIKGWARASLPEKALSCYEEMKAMGIKPDKAV 836
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 28 IMEAFY-KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDM 86
+M FY + GD + F +R +TP+S +Y L + E L R M
Sbjct: 314 LMVKFYGRRGDMHRARETFERMRAR--GITPTS-RIYTSLIHAYAVGRDMDEALSCVRKM 370
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
KE+GI Y+ ++ F+ + A+ F EA+ + ++ K++ + + +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
E+ +V M+ ++ I +++G++ + V+++L G P VTY +
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
IN Y ++G SKA +V M+++G + YS M+ + K +A + M +G
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 267 EPNVWIYNSLM 277
+P+V +YN+++
Sbjct: 551 KPDVILYNNII 561
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 17/231 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M AG+ + Y +IM+ + +GD+ K F ++ LD+ Y+ L +
Sbjct: 648 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV---DIFTYEALLKAC 704
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
KSGR L ++M + I + VY LI +A +V A +L ++ +++G+ D+
Sbjct: 705 CKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDI 764
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ + + G + + + +E M+ + + ++ G+++ A+ YE+
Sbjct: 765 HTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEE 824
Query: 191 LISQGCIPGQVTY----------ASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ + G P + Y ASI AY +YS + EM + G
Sbjct: 825 MKAMGIKPDKAVYHCLLTSLLSRASIAEAY----IYSGVMTICKEMVEAGL 871
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 131/275 (47%), Gaps = 3/275 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N++ + + M+ + D Y +++A Y G+ + L+ E E R L++ P H
Sbjct: 275 NTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPP---H 331
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y ++ L K GR E F +M +KG + ++Y +LI ++ V A LF+
Sbjct: 332 AYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERM 391
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ +G D + +V + G +++ +E E K+ E+ ++ +++G K
Sbjct: 392 KGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRV 451
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K +E+++ +GC Y ++I+A + G +A +F M+++G D+ V Y+ +
Sbjct: 452 DEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTIL 511
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
++ K R +A++L M KG P + +L
Sbjct: 512 ISGLFKEHRNEEALKLWDLMIDKGITPTTASFRAL 546
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 3/274 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S +E M+ I D Y +++ + K G+++K F + E R L+ Y
Sbjct: 242 ESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLE---PDKITY 298
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + G L +++M+E+G+ P Y+ +I +F+ +
Sbjct: 299 LTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNK 358
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG ++ ++ L+ Y + G V + + + E MK D VIVNG K
Sbjct: 359 KGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDE 418
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV+ +E + Y+S+I+ + G +AEK F EM ++G + Y++++
Sbjct: 419 AVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALID 478
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K+G++ +A+ L +M+ +GC+ V+ Y L+
Sbjct: 479 ALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILI 512
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 143/339 (42%), Gaps = 27/339 (7%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
CY +++ D ++V +F E + + +T + + L S G G E+L +
Sbjct: 157 CYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANS---LIRSFGALGMVEELLWVW 213
Query: 84 RDMKEKGILEDPSVYAS--LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
R MKE GI +PS+Y L+ + ++ AE +F+ E + D+ + ++ Y
Sbjct: 214 RRMKESGI--EPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYC 271
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ G +K +E M+ L ++ + + + +Y+++ +G
Sbjct: 272 KAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPH 331
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
Y+ +I C+ G + VF M +KG V Y++++ YGK G + +A+ L +M
Sbjct: 332 AYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERM 391
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------------YTTVISAYNMAR 303
K +G EP+ Y +++ G K+ R E Y+++I A
Sbjct: 392 KGEGFEPDDVTYGVIVN--GLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAG 449
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
D KF+ E G D ++ +K ++EE
Sbjct: 450 RVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEE 488
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 129/285 (45%), Gaps = 9/285 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYK---IGDSEKVAALFLECESRKLDLTPSSTHMY 63
L + +MK +GI + ++ I +E+V + +EC D+ +T M
Sbjct: 210 LWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEV-MECGKIGPDVVSYNT-MI 267
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
K C K+G + ++ F DM+++ + D Y +LI + S L++E EE
Sbjct: 268 KGYC----KAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEE 323
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ + ++ ++G + V E+M + I +++ + K
Sbjct: 324 RGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNE 383
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ ++E++ +G P VTY I+N C+ G +A + F + + YSS++
Sbjct: 384 AINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLID 443
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
GK GR+ +A + +M +GC + + YN+L+D ++ + +
Sbjct: 444 GLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEE 488
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 4/258 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M G + Y +++A+ K G+ + LF E K + Y ++ +
Sbjct: 353 FENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLF---ERMKGEGFEPDDVTYGVIVNG 409
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR E +++F K+ + + Y+SLI V AE+ F+E E+G +D
Sbjct: 410 LCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQD 469
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G +E+ L + + M+ + + ++++G K A+K+++
Sbjct: 470 SYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWD 529
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I +G P ++ ++ C G ++A K+ E+ G A+ M+ + K G
Sbjct: 530 LMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIP-ETAFEDMINVLCKAG 588
Query: 250 RIRDAMRLVAKMKPKGCE 267
R A +L + +G E
Sbjct: 589 RTEQACKLADGIVDRGRE 606
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 145/333 (43%), Gaps = 25/333 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD-- 68
++M G+ D Y +++A+ + G E L E E+ + PSS +IL
Sbjct: 323 DEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAGFR 380
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G +AF +L R+M+ G+ D Y +I +F + A + F + E+G+
Sbjct: 381 DRGDWQKAFAVL---REMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEP 437
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK-V 187
D+ + L+ + + G ++ E+ E M+ + +++N ++ +W V+ +
Sbjct: 438 DVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQE-HWEGVEAM 496
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ QG +P +TY ++++ Y R G Y +A M+ G Y ++V Y +
Sbjct: 497 LSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 556
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG---------------RAKNLRQ-LEK 291
G A+ +V MK G E ++ + NSL++ G R LR +
Sbjct: 557 RGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVIT 616
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
YTT++ A +FD Y E +G DR
Sbjct: 617 YTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 649
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 134/299 (44%), Gaps = 39/299 (13%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE-- 78
D+ + ++ AF + + AAL L ++ + LTP S + L +LG +GR E
Sbjct: 227 DAPLFSDLISAFARAALPD--AALELLASAQAIGLTPRSNAV-TALISALGTAGRVAEAE 283
Query: 79 --ILKFF--------------------------------RDMKEKGILEDPSVYASLICS 104
L+FF +M + G+ D + Y+ L+ +
Sbjct: 284 ALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDA 343
Query: 105 FASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS 164
+ + A L KE E G+ VF +++ + + G +K V+ M+ + +
Sbjct: 344 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPD 403
Query: 165 DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI 224
V+++ F K A+ + ++ +G P VT+ ++I+A+C+ G + +A ++F
Sbjct: 404 RHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFE 463
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
EM++ Y+ M+ + G+ ++++MK +G PN+ Y +L+D++GR+
Sbjct: 464 EMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRS 522
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KM+ GI D + +++A K G ++ A LF E P T Y I+ +
Sbjct: 427 FNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN---CPPGTTTYNIMINL 483
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ + +MKE+G++ + Y +L+ + K A + + + G+
Sbjct: 484 LGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPS 543
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ LV Y + G+ + L VV++MK L +S + ++N F + R A V +
Sbjct: 544 PTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQ 603
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+ G P +TY +++ A R+ + K ++ EM G
Sbjct: 604 FMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSG 644
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+KM+ +G Y ++ + K G + L +S+ +D + Y +L L
Sbjct: 217 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD---ADVCTYNMLIHDL 273
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+S R + RDM+++ I + Y +LI F++ +V +A +L E G+ +
Sbjct: 274 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 333
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +I EG ++ L++ M+ L S+ V+++G K + A Y +
Sbjct: 334 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 393
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G G++TY +I+ C+ G +A + EM + G D +V YS+++ + K GR
Sbjct: 394 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 453
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ A +V ++ G PN IY++L+
Sbjct: 454 FKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 20/288 (6%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA--SLICSFASIAEVK 112
L S+ +Y IL + G + L+ FR M G +PSVY +++ S E
Sbjct: 118 LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGF--NPSVYTCNAILGSVVKSGEDV 175
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
KE ++ + D+ F L+ + EG EK+ +++ M+ + + ++
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+ + K+ + AA+++ + + S+G TY +I+ CR +K + +M+++
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK- 291
V Y++++ + G++ A +L+ +M G PN +N+L+D H N ++ K
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 292 ---------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
Y ++ EFD+ FY + NG + R
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 125/289 (43%), Gaps = 5/289 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M S G+ + + +++ G+ ++ +F E++ LTPS Y +L D L
Sbjct: 322 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK--GLTPSEVS-YGVLLDGL 378
Query: 71 GKSGRAFEILK-FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ F++ + F+ MK G+ Y +I + A L E + G+ D
Sbjct: 379 CKNAE-FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + G + E+V + L+ + I ++ + A+++YE
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I +G T+ ++ + C+ G ++AE+ M G V++ ++ YG +G
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
A + +M G P + Y SL+ + +LR+ EK+ + A
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 606
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 2/225 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D L K+G E + +M + GI D Y++LI F + K A+E+
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 465
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
G+ + ++ L+ G +++ + + E+M E + D + V+V K
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI-LEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + + S G +P V++ +IN Y G KA VF EM + G Y S+
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ K G +R+A + + + + +YN+L+ ++ NL
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 103/258 (39%), Gaps = 38/258 (14%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ +L SL K+G+ E +F R M GIL + + LI + + E A +F E
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G + L+ + G + + + ++S+ + + ++ K
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIG------LYSKAEKV-------------F 223
AV ++ +++ + +P TY S+I+ CR G L++K + F
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 224 I-----------------EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
+ +M G +V ++M+ Y + G+I L+ +M +
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750
Query: 267 EPNVWIYNSLMDMHGRAK 284
PN+ YN L +HG +K
Sbjct: 751 GPNLTTYNIL--LHGYSK 766
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 116/286 (40%), Gaps = 38/286 (13%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
I+ + K G+ V + E RK+ + IL + L G + + M+
Sbjct: 164 ILGSVVKSGEDVSVWSFLKEMLKRKI---CPDVATFNILINVLCAEGSFEKSSYLMQKME 220
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+ G Y +++ + K A EL + KG+ D+ + L+ +
Sbjct: 221 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 280
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
K ++ M+ ++ ++ ++NGFS A ++ +++S G P VT+ ++I
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
Query: 208 NAYCRIGLYSKAEKVFIEMQQKG--------------------FD-------------KC 234
+ + G + +A K+F M+ KG FD C
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400
Query: 235 V--VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V + Y+ M+ K G + +A+ L+ +M G +P++ Y++L++
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 120/294 (40%), Gaps = 3/294 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
++ +++ E+M + G D +++ + ++G EK L E ++ + P+ T Y
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ--NGGPNLT-TY 757
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL K +R + GIL D SL+ +++ ++ K
Sbjct: 758 NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 817
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ D F L+ G + ++V+ M + +++ +V+ ++ +
Sbjct: 818 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 877
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+ V ++ QG P Y +IN CR+G A V EM VA S+MV
Sbjct: 878 SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
K G+ +A L+ M P + + +LM + + N+ + + V+S
Sbjct: 938 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS 991
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 97/253 (38%), Gaps = 38/253 (15%)
Query: 51 RKLDLTPSS--THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
+ L P++ T MY L ++ KSG + + F +M ++ IL D Y SLI
Sbjct: 602 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Query: 109 AEVKVAEELFKEAEEKGML------------------------------------RDLEV 132
+ +A KEAE +G + D+
Sbjct: 662 GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 721
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
++ Y G +EKT +++ M N + ++++G+SKR+ + +Y +I
Sbjct: 722 TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 781
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G +P ++T S++ C + K+ +G + ++ +++ G I
Sbjct: 782 LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841
Query: 253 DAMRLVAKMKPKG 265
A LV M G
Sbjct: 842 WAFDLVKVMTSLG 854
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 19/313 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ + G+ + Y ++ ++G ++ L L E + TP Y + +
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK--GYTPDVIS-YSTVVNG 290
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G ++ K MK KG+ + +Y S+I I ++ AEE F E +G+L D
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V+ L+ + + G + + M + ++ I++GF + A K++
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P VT+ +IN YC+ G A +V M Q G VV Y++++ K G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YT 293
+ A L+ +M G +PN++ YNS+++ ++ N+ + K YT
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 294 TVISAYNMAREFD 306
T++ AY + E D
Sbjct: 531 TLMDAYCKSGEMD 543
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 3/258 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
T +Y L D K G KFF +M + I D Y ++I F I ++ A +L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F E KG+ D F +L+ Y + G ++ V M A + + +++G K
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+A ++ ++ G P TY SI+N C+ G +A K+ E + G + V
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEKYTT 294
Y++++ Y K+G + A ++ +M KG +P + +N LM+ +HG ++ +L +
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 295 VISAYNMAREFDMCVKFY 312
A F+ VK Y
Sbjct: 589 AKGIAPNATTFNSLVKQY 606
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 125/280 (44%), Gaps = 3/280 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ +M S I D Y I+ F +IGD + LF E + L+ P S + L +
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE--PDSV-TFTELIN 429
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K+G + + M + G + Y +LI ++ A EL E + G+
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + +V + G +E+ +++V + A LN +++ + K A ++
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++ +G P VT+ ++N +C G+ EK+ M KG ++S+V Y
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
++ A + M +G P+ Y +L+ H +A+N+++
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 3/275 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M AG + Y +++ K GD + L E K+ L P+ Y + +
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM--WKIGLQPN-IFTYNSIVNG 500
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSG E +K + + G+ D Y +L+ ++ E+ A+E+ KE KG+
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ + GM+E +++ M + + +V + R AA +Y+
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ S+G P TY +++ +C+ +A +F EM+ KGF V YS ++ + K
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+ +A + +M+ +G + I++ D + K
Sbjct: 681 KFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Query: 93 EDPSVYASLICSFASIAEVKVAEELFKEAE-----EKGMLRDLEVFLKLVLMYIEEGMVE 147
+D V SLI SF ++ V + + + K D VF + ++ G++
Sbjct: 133 KDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLR 192
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA-AVKVYEQLISQGCIPGQVTYASI 206
+ V E M N L +S V + SK A A+ V+ + G +Y +
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+ C++G +A + + M+ KG+ V++YS++V Y + G + +L+ MK KG
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 267 EPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVK 310
+PN +IY S++ + R L + E+ YTT+I + + K
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 311 FYNE 314
F+ E
Sbjct: 373 FFYE 376
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 3/249 (1%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
I+ A K K L+ E S TP + Y L L K+GR+ E +K F +M
Sbjct: 864 IISALVKSNSINKALDLYYEIISGDFSPTPCT---YGPLIGGLLKAGRSEEAMKIFEEMP 920
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+ + ++Y LI F V +A +LFK ++G+ DL+ + LV G V+
Sbjct: 921 DYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVD 980
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ E +K L+ +++NG K R A+ ++ ++ ++G P TY ++I
Sbjct: 981 DAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALI 1040
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
+ G+ +A K+F E+Q G + V Y++++ + K+G A + KM GC
Sbjct: 1041 LHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCS 1100
Query: 268 PNVWIYNSL 276
PN + L
Sbjct: 1101 PNAGTFAQL 1109
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 129/304 (42%), Gaps = 38/304 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y KM+++ D Y +M F GD E V + E E+ D Y IL ++
Sbjct: 320 YTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEA---DGYAPDVVTYTILVEA 376
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSG+ + M+ +GI+ + Y +LI ++ + A ELF E G+
Sbjct: 377 LCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPT 436
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMK-----------NAEL----------------- 161
++ + Y + G EK L+ E MK NA L
Sbjct: 437 AYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFN 496
Query: 162 NISDC-------ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
+I +C +++ +SK A K+ +++S+GC P + S+I+ + G
Sbjct: 497 DIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAG 556
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A ++F ++ VV Y+ ++ GK G++ A+ L MK GC PN +N
Sbjct: 557 RVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFN 616
Query: 275 SLMD 278
+L+D
Sbjct: 617 ALLD 620
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 3/278 (1%)
Query: 14 KSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
KS G Y +M+ +E AAL L E + P+ Y +L D+ GKS
Sbjct: 780 KSLGTHPTPESYNCLMDGLLGCNITE--AALKLFVEMKNAGCCPN-IFTYNLLLDAHGKS 836
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
R E+ + + +M +G + + +I + + A +L+ E +
Sbjct: 837 KRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTY 896
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ ++ G E+ +++ E M + + + I +++NGF K A +++++I
Sbjct: 897 GPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIK 956
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G P +Y ++ G A F E++ G D V+Y+ M+ GK+ R+ +
Sbjct: 957 EGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEE 1016
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
A+ L ++MK +G P ++ YN+L+ G A + Q K
Sbjct: 1017 ALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGK 1054
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 137/326 (42%), Gaps = 41/326 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y++M S G+ Y +M A + D+ + L E E+ L L P+ + Y I
Sbjct: 212 LKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMET--LGLRPN-IYTYTIC 268
Query: 67 CDSLGKSGR---AFEILKFFRD--------------------------------MKEKGI 91
LG++GR A+ ILK D M+
Sbjct: 269 IRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH 328
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D Y +L+ F + +++ + + E E G D+ + LV + G V++ +
Sbjct: 329 KPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFD 388
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+++ M+ + + +++G R A++++ + S G P +Y I+ Y
Sbjct: 389 MLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYG 448
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
++G KA F +M+++G + A ++ + + GRIR+A + + G P+
Sbjct: 449 KLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSV 508
Query: 272 IYNSLMDMHGRAKNLRQLEKYTTVIS 297
YN +M + +A Q++K T +++
Sbjct: 509 TYNMMMKCYSKAG---QIDKATKLLT 531
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 116/272 (42%), Gaps = 7/272 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYK 64
L + M+S G+ + Y ++ + K+GD EK F + + R + + + +Y
Sbjct: 422 LELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLY- 480
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
SL + GR E F D+ G+ D Y ++ ++ ++ A +L E +
Sbjct: 481 ----SLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSE 536
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G D+ V L+ + G V++ ++ +K+ +L + +++ G K A
Sbjct: 537 GCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKA 596
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ + GC P VT+ ++++ C+ A K+F M V+ Y++++
Sbjct: 597 LDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYG 656
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
K GR A +MK +V +Y L
Sbjct: 657 LIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLL 688
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 143/334 (42%), Gaps = 26/334 (7%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKI-GDSEKVAALFLECESRKLDLTPSS 59
++ S L Y++ + ++ + C M F ++ G E +A +F + + ++ P++
Sbjct: 100 SDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNT 159
Query: 60 -THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
++K L G F + K M++ G + + Y LI K A +++
Sbjct: 160 YLTIFKALSIKGGIRQAPFALGK----MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVY 215
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCVIVNGFS 176
K +G+ ++ + L++ ++++E M+ L NI C+ V G +
Sbjct: 216 KRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRA 275
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
R A + + + +GC P VTY +I+A C G KA++++ +M+ +V
Sbjct: 276 GRID--DAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLV 333
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-------- 288
Y ++++ +G G + R ++M+ G P+V Y L++ ++ + Q
Sbjct: 334 TYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVM 393
Query: 289 --------LEKYTTVISAYNMAREFDMCVKFYNE 314
L Y T+IS R D ++ +N
Sbjct: 394 RVRGIVPNLHTYNTLISGLLNLRRLDEALELFNN 427
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 120/273 (43%), Gaps = 10/273 (3%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP S Y L D L LK F +MK G + Y L+ + +
Sbjct: 787 TPES---YNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELF 843
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
EL+ E +G ++ ++ ++ + K L++ + + + + + C ++ G
Sbjct: 844 ELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGL 903
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A+K++E++ C P Y +IN + + G + A +F M ++G +
Sbjct: 904 LKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDL 963
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
+Y+ +V TGR+ DA+ ++K G +P+ YN +++ G++ R+LE+ ++
Sbjct: 964 KSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKS---RRLEEALSL 1020
Query: 296 ISAYNMAREFDMCVKFYNEFRM---NGGVIDRA 325
S R + YN + N G++D+A
Sbjct: 1021 FSEMK-NRGISPELYTYNALILHFGNAGMVDQA 1052
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 133/295 (45%), Gaps = 7/295 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + MK +G ++ + +++ K D+ +A L + C ++ +P Y +
Sbjct: 597 LDLFGSMKESGCPPNTVTFNALLDCLCK-NDAVDLA-LKMFCRMTIMNCSPD-VLTYNTI 653
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE-AEEKG 125
L K GRA F+ MK K + D +L+ V+ A ++ E + G
Sbjct: 654 IYGLIKEGRAGYAFWFYHQMK-KFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSG 712
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ +V+ +L+ + E +E+ + E + + D + ++ K++ A
Sbjct: 713 LQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAK 772
Query: 186 KVYEQLI-SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
K++++ S G P +Y +++ + A K+F+EM+ G + Y+ ++
Sbjct: 773 KLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDA 832
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLEKYTTVISA 298
+GK+ RI + L +M +GC+PN+ +N ++ ++ ++ + L+ Y +IS
Sbjct: 833 HGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISG 887
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 7/208 (3%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSST 60
S+ + +E+M + Y ++ F K G+ LF E + DL
Sbjct: 909 SEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKS--- 965
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y IL + L +GR + + +F ++K G+ D Y +I ++ A LF E
Sbjct: 966 --YTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSE 1023
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ +G+ +L + L+L + GMV++ ++ E ++ L + ++ G SK
Sbjct: 1024 MKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGN 1083
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIIN 208
A V+++++ GC P T+A + N
Sbjct: 1084 KDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++KM G D Y ++ K G + AA+ L K + P +Y L
Sbjct: 164 LHLFDKMIWEGFQPDVVIYATLINGLCKTGHTS--AAIRLLRSMEKGNCQPDVV-VYGTL 220
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
SL K + + F +M KGI + SL+ + ++ E K L E + +
Sbjct: 221 IHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKI 280
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + +V +EGMV + +VV+ M + + +++G R AVK
Sbjct: 281 MPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVK 340
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++ ++ +GC P +Y ++IN YC+I KA +F EM ++ V Y++++
Sbjct: 341 VFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLC 400
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR++DA+ L +M G P++ Y L+D
Sbjct: 401 HVGRLQDAIALFREMVACGQIPDLVTYRILLD 432
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 107/258 (41%), Gaps = 7/258 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDL--TPSSTHMYKILCDSLGKSGRAFEILKF 82
+ +I+ + K+ V +L SRK+D P + + +L +S R
Sbjct: 77 FAKILTSITKVKRYSTVLSL-----SRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
+ + G D + + +LI ++ A LF + +G D+ ++ L+ +
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G + ++ SM+ + +++ K R A ++ ++I++G P VT
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
S++ A C +G + + EM ++ +++V K G + A +V M
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311
Query: 263 PKGCEPNVWIYNSLMDMH 280
G EP+V Y +L+D H
Sbjct: 312 QSGVEPDVVTYTALIDGH 329
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 9/260 (3%)
Query: 11 EKMKSAGIVLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
E +K +++ GC Y ++ + KI +K LF E +KL P++ Y
Sbjct: 337 EAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKL--IPNTV-TYN 393
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L L GR + + FR+M G + D Y L+ + A L K E
Sbjct: 394 TLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGS 453
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ D++++ ++ G +E ++ ++ + L + ++ +G KR A
Sbjct: 454 NLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEA 513
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
K++ ++ C TY +I + R S+A ++ EM +GF V + +V M
Sbjct: 514 TKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGM 573
Query: 245 YGKTGRIRDAMRLVAKMKPK 264
G + + M P
Sbjct: 574 LSDDGLDQSEAHKLEDMFPH 593
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 4/150 (2%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D Y +++ + G+ E LF S+ L + Y I+ L K G E
Sbjct: 458 DIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLK---PNVWTYNIMTHGLCKRGLLDEAT 514
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
K F +M E D Y ++ F E A +L +E +G D+ LV M
Sbjct: 515 KLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGML 574
Query: 141 IEEGMVEKTLEVVESM-KNAELNISDCISC 169
++G+ + +E M + + + D + C
Sbjct: 575 SDDGLDQSEAHKLEDMFPHLRIQVKDTVFC 604
>gi|218191264|gb|EEC73691.1| hypothetical protein OsI_08267 [Oryza sativa Indica Group]
Length = 751
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 21/292 (7%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH------- 61
+YE M S GI + +++ F K+G + +V A FL+ + L L
Sbjct: 330 HYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKGEMQNAQQVFE 389
Query: 62 ------------MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA 109
Y IL KSG E+ M ++G+ + Y I F
Sbjct: 390 EMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGG 449
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
+ AE LF EEKG+ ++ +V Y+ G + + + + N+ D SC
Sbjct: 450 NLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVAR-QGNLVDHFSC 508
Query: 170 V-IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
++N + A V + ++ +P ++Y+ +I+ YC+ G KA F +M Q
Sbjct: 509 SKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQ 568
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+G V+ Y+ ++ Y K GR+++A +L +M G +P+V Y L+D H
Sbjct: 569 RGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGH 620
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 140/345 (40%), Gaps = 50/345 (14%)
Query: 48 CESRKLDL------------TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDP 95
C+ RK DL P Y ++ D L K R E K + +G D
Sbjct: 249 CDCRKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDV 308
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRD-------LEVFLKLVL---------- 138
Y+ LI S+ + + A + ++ G+ + L+ F KL +
Sbjct: 309 YGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLK 368
Query: 139 -----MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
+++++G ++ +V E M A + ++ +GF K + +++
Sbjct: 369 FKDSGLHLDKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMAD 428
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
QG P +TY I +CR G S+AE +F +++KG D V YSSMV Y +G
Sbjct: 429 QGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDH 488
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR--------QLEK--------YTTVIS 297
A L ++ +G + + + L++ R N++ LE Y+ +IS
Sbjct: 489 AYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLIS 548
Query: 298 AYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y + D ++++ G ID + I++ + K +++E
Sbjct: 549 IYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQE 593
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 22/240 (9%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q + + M +V D Y +++ + + GD +K F + R L +
Sbjct: 520 NVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSI---DVI 576
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL + K+GR E + F M GI D Y L+ + + E L +
Sbjct: 577 VYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLL-------DGHLKETLQQGW 629
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G+ ++ FL + +++ SMK+ ++ V+++G K
Sbjct: 630 E--GIAKERRSFL----------LRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYL 677
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++++++ +G P Y ++IN YC G SKAE + EM KG + + +S +
Sbjct: 678 VEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 737
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 16/218 (7%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M E ++ D Y+ LI + ++ A F + ++G+ D+ V+ L+ Y + G
Sbjct: 531 MLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGR 590
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSK-------------RRAYWAAV---KVYE 189
+++ ++ M N + V+++G K RR++ K+
Sbjct: 591 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 650
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ P Y +I+ C+ +A ++F EM QKG AY++++ Y G
Sbjct: 651 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 710
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
I A L+ +M KG EP+ ++ L R++ ++
Sbjct: 711 EISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 748
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 116/291 (39%), Gaps = 21/291 (7%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y++ +S G D Y ++++ + + +LF E S + +S L D
Sbjct: 65 YFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSS----SNASGPEILPLVD 120
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
++ L F D K + V A+ IC F+ I + V ++
Sbjct: 121 HHRRTCATPCSLSFMVDCLIKACITCYDVQAT-ICLFSGICRLGVVPSVWT--------- 170
Query: 129 DLEVFLKLVLMYI-EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
L+L +I E G E L MK +L ++ + + A++V
Sbjct: 171 -----WNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQV 225
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ ++ G P Y+S + C Y A + E+ ++ +AY+ ++ K
Sbjct: 226 WAEMTEMGVKPDARGYSSFLIGLCDCRKYDLAYVILQEINREKVPVEAMAYNMVMDGLCK 285
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLEKYTTVIS 297
R+ +A +L+ +G P+V+ Y+ L+ + + NL + ++ Y ++S
Sbjct: 286 EMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVS 336
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 130/278 (46%), Gaps = 3/278 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ +++ G+ D Y ++ A+ G E+ L + + Y + +
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS---PGVYTYNTVIN 313
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K G+ + F +M G+ D + Y SL+ +V E++F + + ++
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
DL F ++ ++ G ++K L S+K A L + I +++ G+ ++ A+ +
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ QGC VTY +I++ C+ + +A+K+F EM ++ + ++ + K
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
G +++AM L KMK K +V YN+L+D G+ ++
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 130/279 (46%), Gaps = 3/279 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M+S +V D C+ +M F + G+ +K AL ++ L P + +Y IL
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK--ALMYFNSVKEAGLIPDNV-IYTILIQG 419
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G + +M ++G D Y +++ + A++LF E E+ + D
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+ + + G ++ +E+ + MK + + +++GF K A +++
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++S+ +P ++Y+ ++NA C G ++A +V+ EM K V+ +SM+ Y ++G
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
D + KM +G P+ YN+L+ R +N+ +
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 132/291 (45%), Gaps = 5/291 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L Y+ +K AG++ D+ Y +++ + + G L E + + +
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT-- 447
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + L K E K F +M E+ + D LI + ++ A ELF++
Sbjct: 448 -YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+EK + D+ + L+ + + G ++ E+ M + E+ + ++VN +
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +V++++IS+ P + S+I YCR G S E +M +GF ++Y+++
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Query: 242 VAMYGKTGRIRDAMRLVAKMKPK--GCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ + + + A LV KM+ + G P+V+ YNS++ R +++ E
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 108/232 (46%), Gaps = 5/232 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q+ + ++KMK I LD Y +++ F K+GD + ++ + S+++ TP S
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS-- 552
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL ++L G E + + +M K I + S+I + E ++
Sbjct: 553 -YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN-ISDCIS-CVIVNGFSKRR 179
+G + D + L+ ++ E + K +V+ M+ + + D + I++GF ++
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A V ++I +G P + TY +IN + ++A ++ EM Q+GF
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 107/229 (46%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S+ ++ +L + ++ + E + F ++ KG +LI S I V++A +
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
++E G+ ++ +V ++G +EK + ++ + +++ +S
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ + +G PG TY ++IN C+ G Y +A++VF EM + G
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
Y S++ K G + + ++ + M+ + P++ ++S+M + R+ NL
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 391
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 125/244 (51%), Gaps = 2/244 (0%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E +L H +L +SL K G + K ++ M + G++ + +Y L + +
Sbjct: 150 EQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKS 209
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+V+ AE+L E + KG+L+D+ + L+ +Y ++GM + L + M+ +N+
Sbjct: 210 GDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSY 269
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
++ GF K A++++ ++ + P VTY ++I+ YC+ +A K+ M+
Sbjct: 270 NSLIYGFCKEGRMREAMRMFSEI--KNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEA 327
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
KG VV Y+S++ + GRIRDA +L+ +M + + + N+L++ + + +L+
Sbjct: 328 KGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKS 387
Query: 289 LEKY 292
K+
Sbjct: 388 ALKF 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 93/199 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + L + GR + K +M E+ + D +LI ++ I ++K A + +
Sbjct: 337 YNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKML 396
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G+ D + L+ + + +E E++ SM +A S C IV+G++K+
Sbjct: 397 EAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMD 456
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + + ++ +S+G Y ++I + C++ AE++F M+ KG V Y+S+
Sbjct: 457 AVLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIA 516
Query: 243 AMYGKTGRIRDAMRLVAKM 261
Y G + A ++ +M
Sbjct: 517 YAYWNVGNVSAASSMLEEM 535
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 37/253 (14%)
Query: 95 PSVYASLICSFASIA------EVKVAEELFKEAEEKGMLR-----------------DLE 131
P SL CS+A I K A+ + ++ K L + +
Sbjct: 68 PHYSHSLQCSWAMIHILTEHKHFKTAQHVLEKIAHKDFLSSPSVLSTLVRTHDNQEVNSQ 127
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
V LV+ Y + M + ++V E M+ E+ V++N K K+Y+++
Sbjct: 128 VLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRM 187
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ G +P Y + +A + G +AE++ EM KG + + Y++++++Y K G
Sbjct: 188 VQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMH 247
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSL-------------MDMHGRAKNLRQLE-KYTTVIS 297
+A+ + +M+ +G ++ YNSL M M KN YTT+I
Sbjct: 248 YEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNATPNHVTYTTLID 307
Query: 298 AYNMAREFDMCVK 310
Y E + +K
Sbjct: 308 GYCKTNELEEALK 320
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M G++ D Y ++ + K G + ++ E ++L S Y L
Sbjct: 220 NEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVS---YNSLIYGF 276
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR E ++ F ++K + Y +LI + E++ A ++ K E KG+ +
Sbjct: 277 CKEGRMREAMRMFSEIKNAT--PNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGV 334
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYE 189
+ ++ ++G + +++ M +L +D I+C ++N + K +A+K
Sbjct: 335 VTYNSILRKLCQDGRIRDANKLLNEMSERKLQ-ADNITCNTLINAYCKIGDLKSALKFKN 393
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ G P TY ++I+ +C+ A+++ M GF YS +V Y K
Sbjct: 394 KMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKD 453
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ + L + +G +V +Y +L+
Sbjct: 454 NMDAVLALPDEFLSRGICLDVSVYRALI 481
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+KM+ +G Y ++ + K G + L +S+ +D + Y +L L
Sbjct: 257 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD---ADVCTYNMLIHDL 313
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+S R + RDM+++ I + Y +LI F++ +V +A +L E G+ +
Sbjct: 314 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 373
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +I EG ++ L++ M+ L S+ V+++G K + A Y +
Sbjct: 374 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 433
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G G++TY +I+ C+ G +A + EM + G D +V YS+++ + K GR
Sbjct: 434 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ A +V ++ G PN IY++L+
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 20/288 (6%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA--SLICSFASIAEVK 112
L S+ +Y IL + G + L+ FR M G +PSVY +++ S E
Sbjct: 158 LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGF--NPSVYTCNAILGSVVKSGEDV 215
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
KE ++ + D+ F L+ + EG EK+ +++ M+ + + ++
Sbjct: 216 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 275
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+ + K+ + AA+++ + + S+G TY +I+ CR +K + +M+++
Sbjct: 276 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 335
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK- 291
V Y++++ + G++ A +L+ +M G PN +N+L+D H N ++ K
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395
Query: 292 ---------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
Y ++ EFD+ FY + NG + R
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 126/293 (43%), Gaps = 5/293 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M S G+ + + +++ G+ ++ +F E++ LTPS Y +L D L
Sbjct: 362 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK--GLTPSEVS-YGVLLDGL 418
Query: 71 GKSGRAFEILK-FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ F++ + F+ MK G+ Y +I + A L E + G+ D
Sbjct: 419 CKNAE-FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + G + E+V + L+ + I ++ + A+++YE
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I +G T+ ++ + C+ G ++AE+ M G V++ ++ YG +G
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
A + +M G P + Y SL+ + +LR+ EK+ + A A
Sbjct: 598 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 650
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D L K+G E + +M + GI D Y++LI F + K A+E+
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ + ++ L+ G +++ + + E+M V+V K
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + + S G +P V++ +IN Y G KA VF EM + G Y S++
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
K G +R+A + + + + +YN+L+ ++ NL
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 669
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 103/258 (39%), Gaps = 38/258 (14%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ +L SL K+G+ E +F R M GIL + + LI + + E A +F E
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G + L+ + G + + + ++S+ + + ++ K
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIG------LYSKAEKV-------------F 223
AV ++ +++ + +P TY S+I+ CR G L++K + F
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730
Query: 224 I-----------------EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
+ +M G +V ++M+ Y + G+I L+ +M +
Sbjct: 731 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 790
Query: 267 EPNVWIYNSLMDMHGRAK 284
PN+ YN L +HG +K
Sbjct: 791 GPNLTTYNIL--LHGYSK 806
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 116/286 (40%), Gaps = 38/286 (13%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
I+ + K G+ V + E RK+ + IL + L G + + M+
Sbjct: 204 ILGSVVKSGEDVSVWSFLKEMLKRKI---CPDVATFNILINVLCAEGSFEKSSYLMQKME 260
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+ G Y +++ + K A EL + KG+ D+ + L+ +
Sbjct: 261 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 320
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
K ++ M+ ++ ++ ++NGFS A ++ +++S G P VT+ ++I
Sbjct: 321 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 380
Query: 208 NAYCRIGLYSKAEKVFIEMQQKG--------------------FD-------------KC 234
+ + G + +A K+F M+ KG FD C
Sbjct: 381 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 440
Query: 235 V--VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V + Y+ M+ K G + +A+ L+ +M G +P++ Y++L++
Sbjct: 441 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 120/294 (40%), Gaps = 3/294 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
++ +++ E+M + G D +++ + ++G EK L E ++ + P+ T Y
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ--NGGPNLT-TY 797
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL K +R + GIL D SL+ +++ ++ K
Sbjct: 798 NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 857
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ D F L+ G + ++V+ M + +++ +V+ ++ +
Sbjct: 858 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 917
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+ V ++ QG P Y +IN CR+G A V EM VA S+MV
Sbjct: 918 SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 977
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
K G+ +A L+ M P + + +LM + + N+ + + V+S
Sbjct: 978 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS 1031
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 97/253 (38%), Gaps = 38/253 (15%)
Query: 51 RKLDLTPSS--THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
+ L P++ T MY L ++ KSG + + F +M ++ IL D Y SLI
Sbjct: 642 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 109 AEVKVAEELFKEAEEKGML------------------------------------RDLEV 132
+ +A KEAE +G + D+
Sbjct: 702 GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 761
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
++ Y G +EKT +++ M N + ++++G+SKR+ + +Y +I
Sbjct: 762 TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 821
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G +P ++T S++ C + K+ +G + ++ +++ G I
Sbjct: 822 LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 881
Query: 253 DAMRLVAKMKPKG 265
A LV M G
Sbjct: 882 WAFDLVKVMTSLG 894
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 135/298 (45%), Gaps = 20/298 (6%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ D L K GR E + F +MK +G++ D Y++LI F + ++ LF E
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G+ D+ F L+ +EG V + +++E M + + +++GF
Sbjct: 300 DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLN 359
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+A +++ + S+G P +++Y ++IN YC+ +A ++ EM Q G V Y +++
Sbjct: 360 SARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLL 419
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------------LR--- 287
+ G++ DA +L MK G N IY +D G KN L+
Sbjct: 420 KGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLD--GLCKNDCLFEAMELFNELKSYN 477
Query: 288 ---QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+E Y+ +I A + + + + + G D IM+ F K+ Q++
Sbjct: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDN 535
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 38/303 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MK+ G++ D Y ++ F G ++ LF E + + + +L D+
Sbjct: 260 FEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ---PDMVTFSVLIDT 316
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ E K M ++GI+ + Y SLI F + ++ A ELF KG+ D
Sbjct: 317 LCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPD 376
Query: 130 LEVFLKLVLMY-----------------------------------IEEGMVEKTLEVVE 154
+ L+ Y ++G V ++
Sbjct: 377 EISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFG 436
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MK ++ + I + ++G K + A++++ +L S Y+ +I+ C+ G
Sbjct: 437 VMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAG 496
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
A ++F ++ Q+G VV Y+ M+ + K G++ +A L KM+ GC P++ YN
Sbjct: 497 KLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYN 556
Query: 275 SLM 277
+L+
Sbjct: 557 TLL 559
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 132/271 (48%), Gaps = 7/271 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M GIV + Y +++ F +GD LFL S+ L+ S Y L +
Sbjct: 331 EVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEIS---YTTLINGY 387
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+ + E + + +M + G + + Y +L+ +V A++LF + G+ +
Sbjct: 388 CKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANS 447
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMK--NAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+++ + + + + +E+ +K N +LNI + SC+I +G K A +++
Sbjct: 448 QIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIEN-YSCLI-DGLCKAGKLETAWELF 505
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E+L +G P VTY +I+ +C++G A +F +M++ G ++AY++++ + +
Sbjct: 506 EKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEG 565
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
++ + ++L+ KM K PN ++DM
Sbjct: 566 NKLEEVIKLLHKMVQKDVSPNAASCTIVVDM 596
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ ++ +G IP VTY ++I C S+A ++F+ MQ+ G V Y +++
Sbjct: 145 ALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIK 204
Query: 244 MYGKTGRIRDAMRLVAKMKPKG------CEPNVWIYNSLMD---MHGRAKNLRQLEK--- 291
+TG + A++L +M C+P V Y+ ++D GR ++L +
Sbjct: 205 GLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMK 264
Query: 292 ----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
Y+T+I + A ++D ++E G D +++ K ++
Sbjct: 265 AQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVT 324
Query: 342 E 342
E
Sbjct: 325 E 325
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 8/212 (3%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
A + FF M + S + L+ A I L+ E G+ DL
Sbjct: 72 AIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSI 131
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
L V + L + + + ++ G A +++ ++ G
Sbjct: 132 LANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLG 191
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEM----QQKGFD--KCVVAYSSMVAMYGKTG 249
C P VTY ++I C+ G + A K+ EM Q G + V+ YS ++ K G
Sbjct: 192 CTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVG 251
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
R +A L +MK +G P+V Y++L +HG
Sbjct: 252 REDEAKELFEEMKAQGMIPDVISYSTL--IHG 281
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 103/248 (41%), Gaps = 3/248 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M S G+ D Y ++ + K ++ A+ L E ++ +P+ T Y L L +
Sbjct: 368 MPSKGLEPDEISYTTLINGYCKTWKVKE--AMNLYNEMLQVGKSPNVT-TYGTLLKGLFQ 424
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G+ + K F MK G+ + +Y + + A ELF E + ++E
Sbjct: 425 KGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIEN 484
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + G +E E+ E + L ++++GF K A ++E++
Sbjct: 485 YSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKME 544
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
GC P + Y +++ +C + K+ +M QK + + +V M K + +
Sbjct: 545 ENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYK 604
Query: 253 DAMRLVAK 260
+ L+ K
Sbjct: 605 KFVDLLPK 612
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 138/330 (41%), Gaps = 41/330 (12%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ LH+++K+ + G +D Y ++ KIG++ L E R T + MY
Sbjct: 97 KKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRS---TRPNVVMY 153
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE------------- 110
+ D L K E + +M +GI D Y +LI F + +
Sbjct: 154 NTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMIL 213
Query: 111 ----------------------VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
VK A+ L ++G+ + + L+ Y G V+
Sbjct: 214 KNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQN 273
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
++ +M +N + +++NG K + A+ + +++ + +P VTY S+I+
Sbjct: 274 AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLID 333
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
C+ G + A + EM +G VV Y+S++ K + A L KMK +G +P
Sbjct: 334 GLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 393
Query: 269 NVWIYNSLMD---MHGRAKNLRQLEKYTTV 295
++ Y +L+D GR KN ++L ++ V
Sbjct: 394 TMYTYTALIDGLCKGGRLKNAQELFQHLLV 423
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/299 (18%), Positives = 126/299 (42%), Gaps = 38/299 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M + GI D+ Y ++ F +G +L E + ++ ++Y IL ++
Sbjct: 173 YSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNIN---PGVYIYNILINA 229
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G E M ++GI Y++L+ + + EV+ A+++F + G+ +
Sbjct: 230 LCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPN 289
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ + V++ + ++ M + + +++G K +A+ +
Sbjct: 290 VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN 349
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G VTY S+++A C+ KA +F++M+++G + Y++++ K G
Sbjct: 350 EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGG 409
Query: 250 RIRDAMRLV-----------------------------------AKMKPKGCEPNVWIY 273
R+++A L +KM+ GC PN +
Sbjct: 410 RLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 468
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 105/253 (41%), Gaps = 3/253 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M GI Y +M+ + +G+ + +F ++ + P+ + Y I+ + L K
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHA--MVQMGVNPN-VYSYNIMINGLCK 302
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R E + R+M K ++ D Y SLI + A L E +G D+
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 362
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + ++K + MK + + +++G K A ++++ L+
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+GC TY +I+ C+ G++ +A + +M+ G V + ++ +
Sbjct: 423 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEND 482
Query: 253 DAMRLVAKMKPKG 265
A +L+ +M KG
Sbjct: 483 KAEKLLHEMIAKG 495
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 9/171 (5%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N F + V +++ G P +T +++ C G K+ ++ +
Sbjct: 50 ILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQ 109
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
GF V+Y +++ K G R A++L+ ++ + PNV +YN+++D L
Sbjct: 110 GFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIID---------GL 160
Query: 290 EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
K V AY++ E D F + + + G ++G FS L ++
Sbjct: 161 CKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEM 211
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 138/310 (44%), Gaps = 27/310 (8%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++EA + DS A+ L E R TP Y +L + + K GR E +KF
Sbjct: 242 YTILIEATCR--DSGVGHAMKLLDEMRDRGCTPDVV-TYNVLVNGICKEGRLDEAIKFLN 298
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
DM G + + ++ S S AE+L + KG + F L+ +G
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ + ++++E M + +++GF K + A++ E+++S+GC P VTY
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+++ A C+ G A ++ ++ KG ++ Y++++ K G+ A++L+ +M+ K
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEF-----RMNG 319
+P+ Y+SL + + + D +KF++EF R N
Sbjct: 479 DLKPDTITYSSL-------------------VGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 320 GVIDRAMAGI 329
+ M G+
Sbjct: 520 VTFNSIMLGL 529
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 12/278 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKIL 66
+ E M G V D ++ F ++G + K A + LE D+ Y ++
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI-----TYNVM 178
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
K+G L M + D Y +++ S ++K A E+ ++
Sbjct: 179 ISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ + V +++++ M++ V+VNG K A+K
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ S GC P +T+ I+ + C G + AEK+ +M +KGF VV ++ ++
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+ G + A+ ++ KM GC+PN YN L +HG K
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPL--LHGFCK 391
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 154/348 (44%), Gaps = 22/348 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E ++ +G V D Y ++ + K G+ ++ L+ S D+ +T + + LCDS
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSV-LDRMSVSPDVVTYNT-ILRSLCDS- 217
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK +A E+L M ++ D Y LI + + V A +L E ++G D+
Sbjct: 218 GKLKQAMEVLD---RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ LV +EG +++ ++ + M ++ + +I+ + A K+
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ +G P VT+ +IN CR GL +A + +M Q G ++Y+ ++ + K +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKN----LRQLEK---------YTT 294
+ A+ + +M +GC P++ YN+++ G+ ++ L QL Y T
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
VI A + +K +E R D +VG S+ +++E
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K E ++ G +P + ++I +CR+G KA K+ ++ G V+ Y+ M++ Y
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGY 182
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----LEK---------- 291
K G I +A+ ++ +M P+V YN+++ + L+Q L++
Sbjct: 183 CKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I A +K +E R G D ++V K +++E
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 86/227 (37%), Gaps = 38/227 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ Y E+M S G D Y ++ A K G E + + S+ +P Y +
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK--GCSPVLI-TYNTV 455
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K+G+ + +K +M+ K + D Y+SL+ + +V A + F E E G+
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ F ++L G K R A+
Sbjct: 516 RPNAVTFNSIML-----------------------------------GLCKSRQTDRAID 540
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+I++GC P + +Y +I G+ +A ++ E+ KG K
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMK 587
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 83/203 (40%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L K + +++ M +G D Y +++ + +V+ A E+ +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG L + ++ + G K +++++ M+ +L +V G S+
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+K + + G P VT+ SI+ C+ +A + M +G +Y+ ++
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
G ++A+ L+ ++ KG
Sbjct: 562 EGLAYEGMAKEALELLNELCNKG 584
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 143/312 (45%), Gaps = 27/312 (8%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++EA + DS A+ L E R TP Y +L + + K GR E +KF
Sbjct: 242 YTILIEATCR--DSGVGQAMKLLDEMRDRGCTPDVV-TYNVLVNGICKEGRLDEAIKFLN 298
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
DM G + + ++ S S AE+L + KG + F L+ +G
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ + ++++E M + +++GF K + A++ E+++S+GC P VTY
Sbjct: 359 LLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+++ A C+ G A ++ ++ KG ++ Y++++ K G+ A++L+ +M+ K
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEF-RMNGGVID 323
+P+ Y+SL + + + D +KF++EF RM GV
Sbjct: 479 DLKPDTITYSSL-------------------VGGLSREGKVDEAIKFFHEFERM--GVRP 517
Query: 324 RAMA--GIMVGV 333
A+ IM+G+
Sbjct: 518 NAVTFNSIMLGL 529
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 12/278 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKIL 66
+ E M G V D ++ F ++G + K A + LE D+ Y ++
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVI-----TYNVM 178
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
K+G L M + D Y +++ S ++K A E+ ++
Sbjct: 179 ISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ + V + +++++ M++ V+VNG K A+K
Sbjct: 236 YPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ S GC P +T+ I+ + C G + AEK+ +M +KGF VV ++ ++
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+ G + A+ ++ KM GC+PN YN L +HG K
Sbjct: 356 RKGLLGRAIDILEKMPKHGCQPNSLSYNPL--LHGFCK 391
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 154/348 (44%), Gaps = 22/348 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E ++ +G V D Y ++ + K G+ ++ L+ S D+ +T + + LCDS
Sbjct: 161 EVLEGSGAVPDVITYNVMISGYCKAGEINNALSV-LDRMSVSPDVVTYNT-ILRSLCDS- 217
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK +A E+L M ++ D Y LI + + V A +L E ++G D+
Sbjct: 218 GKLKQAMEVLD---RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDV 274
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ LV +EG +++ ++ + M ++ + +I+ + A K+
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ +G P VT+ +IN CR GL +A + +M + G ++Y+ ++ + K +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKK 394
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKN----LRQLEK---------YTT 294
+ A+ + +M +GC P++ YN+++ G+ ++ L QL Y T
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
VI A + +K +E R D +VG S+ +++E
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 123/278 (44%), Gaps = 15/278 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMY 63
+ + M S+G + + I+ + G D+EK+ A L + +PS +
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML-----RKGFSPSVV-TF 347
Query: 64 KILCDSL---GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
IL + L G GRA +IL+ M + G + Y L+ F ++ A E +
Sbjct: 348 NILINFLCRKGLLGRAIDILE---KMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+G D+ + ++ ++G VE +E++ + + + +++G +K
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A+K+ +++ ++ P +TY+S++ R G +A K F E ++ G V ++S
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNS 524
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ KT + A+ + M +GC+P Y L++
Sbjct: 525 IMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIE 562
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K E ++ G +P + ++I +CR+G KA K+ ++ G V+ Y+ M++ Y
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGY 182
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----LEK---------- 291
K G I +A+ ++ +M P+V YN+++ + L+Q L++
Sbjct: 183 CKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I A +K +E R G D ++V K +++E
Sbjct: 240 ITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 83/203 (40%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L K + +++ M +G D Y +++ + +V+ A E+ +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG L + ++ + G K +++++ M+ +L +V G S+
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+K + + G P VT+ SI+ C+ +A + M +G +Y+ ++
Sbjct: 502 EAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILI 561
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
G ++A+ L+ ++ KG
Sbjct: 562 EGLAYEGMAKEALELLNELCNKG 584
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 86/227 (37%), Gaps = 38/227 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ Y E+M S G D Y ++ A K G E + + S+ +P Y +
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK--GCSPVLI-TYNTV 455
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K+G+ + +K +M+ K + D Y+SL+ + +V A + F E E G+
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGV 515
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ F ++L G K R A+
Sbjct: 516 RPNAVTFNSIML-----------------------------------GLCKTRQTDRAID 540
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+I++GC P + +Y +I G+ +A ++ E+ KG K
Sbjct: 541 FLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMK 587
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 147/294 (50%), Gaps = 12/294 (4%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL---CD 68
KMK GI + Y I+ F K G +E AA + E++++ T +++ KI+ C
Sbjct: 367 KMKEEGIEMSLVTYSVIVGGFSKAGHAE--AADYWFDEAKRIHKTLNASIYGKIIYAHCQ 424
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ RA ++ R+M+E+GI ++Y +++ + +A+ K +FK +E G
Sbjct: 425 TCNME-RAEALV---REMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 480
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ +Y + G + K LEV MK + + +++NGF K + + A V+
Sbjct: 481 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 540
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E ++ +G P + Y +II+A+C +G +A + EMQ+ + ++ Y K+
Sbjct: 541 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 600
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
G +R ++ + M+ GC P V +N L++ G + RQ+EK ++ +A
Sbjct: 601 GDMRRSLEVFDMMRRCGCVPTVHTFNGLIN--GLVEK-RQMEKAVEILDEMTLA 651
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 116/254 (45%), Gaps = 3/254 (1%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
+ I+ + K GD + +F R+ P+ H + L + L + + + ++
Sbjct: 589 TFMPIIHGYAKSGDMRRSLEVFDMM--RRCGCVPT-VHTFNGLINGLVEKRQMEKAVEIL 645
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+M G+ + Y ++ +AS+ + A E F + +G+ D+ + L+ +
Sbjct: 646 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKS 705
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G ++ L V + M + + + ++++G+++R W A + +Q+ +G P TY
Sbjct: 706 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 765
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
S I+A + G ++A + EM+ G + Y++++ + + A+ +MK
Sbjct: 766 TSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA 825
Query: 264 KGCEPNVWIYNSLM 277
G +P+ +Y+ L+
Sbjct: 826 MGIKPDKAVYHCLL 839
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 147/332 (44%), Gaps = 23/332 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTHMYKILCDSL 70
MK G+ + Y ++ F K+ D A+F + E K D+ + ++ C +
Sbjct: 508 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN-NIISAFC-GM 565
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G RA + +K + ++ + + +I +A +++ + E+F G + +
Sbjct: 566 GNMDRAIQTVKEMQKLRHRPTTR---TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTV 622
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +E+ +EK +E+++ M A ++ ++ I+ G++ A + + +
Sbjct: 623 HTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTR 682
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L ++G TY +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 683 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 742
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLE---------KYTT 294
+ +A L+ +MK +G +P++ Y S + DM+ + + ++E YTT
Sbjct: 743 VWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 802
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
+I + A + + Y E + G D+A+
Sbjct: 803 LIKGWARASLPEKALSCYEEMKAMGIKPDKAV 834
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 28 IMEAFY-KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDM 86
+M FY + GD + F +R +TP+S +Y L + E L R M
Sbjct: 312 LMVKFYGRRGDMHRARETFERMRAR--GITPTS-RIYTSLIHAYAVGRDMDEALSCVRKM 368
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
KE+GI Y+ ++ F+ + A+ F EA+ + ++ K++ + + +
Sbjct: 369 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 428
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
E+ +V M+ ++ I +++G++ + V+++L G P VTY +
Sbjct: 429 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 488
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
IN Y ++G SKA +V M+++G + YS M+ + K +A + M +G
Sbjct: 489 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 548
Query: 267 EPNVWIYNSLM 277
+P+V +YN+++
Sbjct: 549 KPDVILYNNII 559
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 17/231 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M AG+ + Y +IM+ + +GD+ K F ++ LD+ Y+ L +
Sbjct: 646 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV---DIFTYEALLKAC 702
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
KSGR L ++M + I + VY LI +A +V A +L ++ +++G+ D+
Sbjct: 703 CKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDI 762
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ + + G + + + +E M+ + + ++ G+++ A+ YE+
Sbjct: 763 HTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEE 822
Query: 191 LISQGCIPGQVTY----------ASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ + G P + Y ASI AY +YS + EM + G
Sbjct: 823 MKAMGIKPDKAVYHCLLTSLLSRASIAEAY----IYSGVMTICKEMVEAGL 869
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 137/293 (46%), Gaps = 17/293 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS---STHMY 63
L +++M G+ D CY +++ F+K GD + ++ +L PS + Y
Sbjct: 179 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW-----ERLLKGPSVYPNIPSY 233
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ + L K G+ E + + MK+ +D Y++LI + A ++KE E
Sbjct: 234 NVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 293
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV----IVNGFSKRR 179
G+ D+ V+ ++ Y+ G +E+ LE+ + M+ C + V ++ G +
Sbjct: 294 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK-----EGCRTVVSYNILIRGLFENA 348
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+ ++E L + C +TY +++ C+ G +KA + E + D AYS
Sbjct: 349 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYS 408
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
SM+ + GR+ + ++ +M GC+PN ++ N++++ RA L ++
Sbjct: 409 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRF 461
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 136/330 (41%), Gaps = 39/330 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M G+ D Y ++ + + G E+ L+ E S Y IL
Sbjct: 288 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS----YNILIRG 343
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++ + E + + + EK D Y L+ + A + +EAE D
Sbjct: 344 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 403
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ EG +++ V++ M + + ++NGF + A++ +
Sbjct: 404 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFG 463
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM-------- 241
++S+GC P VTY ++IN + +S+A + EM QKG+ ++ YS +
Sbjct: 464 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGK 523
Query: 242 -------------------------VAMYG--KTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ ++G +G++ DA++L ++MK + C PN+ +N
Sbjct: 524 KLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHN 583
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
+LM+ + ++ + K I Y + +
Sbjct: 584 TLMEGFYKVRDFERASKIWDHILQYGLQPD 613
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 132/288 (45%), Gaps = 17/288 (5%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS-STH--MYKILCDSLGKSGRAFEILK 81
Y ++ A + ++ + FL E+ + L+P+ T+ + KI C + +A E+L
Sbjct: 92 YNSLLNALIESNKWDEAESFFLYFET--MGLSPNLQTYNILIKISCRK-KQFDKAKELLN 148
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
+ M +G D Y +LI S A + A +LF E E+G+ D+ + L+ +
Sbjct: 149 W---MWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFF 205
Query: 142 EEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
++G + E+ E + + S V++NG K + + +++ ++
Sbjct: 206 KKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDL 265
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
TY+++I+ C G A +V+ EM + G VV Y++M+ Y + GRI + + L
Sbjct: 266 YTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKV 325
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
M+ +GC V YN L+ + L + K IS + + E D C
Sbjct: 326 MEKEGCR-TVVSYNILI------RGLFENAKVDEAISIWELLPEKDCC 366
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
NI ISC +++ + A ++ + QG P +Y ++IN+ + G S A K
Sbjct: 128 NILIKISC-------RKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALK 180
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM-KPKGCEPNVWIYNSLMD-- 278
+F EM ++G V Y+ ++ + K G I +A + ++ K PN+ YN +++
Sbjct: 181 LFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGL 240
Query: 279 ------------MHGRAKNLR--QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
H KN R L Y+T+I + D + Y E NG D
Sbjct: 241 CKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDV 300
Query: 325 AMAGIMVGVFSKLSQIEE 342
+ M+ + + +IEE
Sbjct: 301 VVYNTMLNGYLRAGRIEE 318
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/258 (17%), Positives = 107/258 (41%), Gaps = 3/258 (1%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEI 79
LD+ Y ++ + G ++VA + + P ++ + + ++ + +
Sbjct: 402 LDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP---YVCNAVINGFVRASKLEDA 458
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
L+FF +M KG Y +LI + A L KE +KG ++ + L+
Sbjct: 459 LRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNG 518
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ ++ L + + +I++G A+++Y ++ + C+P
Sbjct: 519 LCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPN 578
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VT+ +++ + ++ + +A K++ + Q G +++Y+ + RI DA+ +
Sbjct: 579 LVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLN 638
Query: 260 KMKPKGCEPNVWIYNSLM 277
+G P +N L+
Sbjct: 639 DAVDRGVLPTAITWNILV 656
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 77/183 (42%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + L K+ R E ++M +KG + Y+ L+ ++ +A L+ +A
Sbjct: 477 YNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 536
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
EKG D+++ ++ G VE L++ MK + ++ GF K R +
Sbjct: 537 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFE 596
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K+++ ++ G P ++Y + C S A + +G + ++ +V
Sbjct: 597 RASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 656
Query: 243 AMY 245
Y
Sbjct: 657 QGY 659
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 133/282 (47%), Gaps = 3/282 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y+ +M G+ D + ++ A + G E +F E + + Y
Sbjct: 79 LGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLG---SGRDIYTYNTF 135
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D++ K G + DM+ I + Y++L+ F+ + + A +L ++ + G+
Sbjct: 136 VDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGI 195
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ +Y++ G ++ V E M+N + ++NG+ K+
Sbjct: 196 QLDRVCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAF 255
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + + +QG P +TY+++I+ Y + G++ A V+++ ++ G VV +SS +
Sbjct: 256 LVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLA 315
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
K G + A+ L+ +M G +PNV YN+++D G++K L +
Sbjct: 316 KNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKILTE 357
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA-AVKVYEQLISQ 194
L+ Y G+ + + V+ESMK A L + +++ K + + Q++
Sbjct: 29 LISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLQD 88
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G P + T+ S++ A R G A VF EM G + + Y++ V K G + A
Sbjct: 89 GLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELA 148
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNE 314
++V M+ +PNV Y++LMD ++ ++D +K +
Sbjct: 149 TQVVLDMEANNIKPNVVTYSTLMD-------------------GFSKLEKYDEALKLREK 189
Query: 315 FRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ G +DR ++ ++ K + +E+
Sbjct: 190 MKSLGIQLDRVCYNTLLAIYVKTGKYDEI 218
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG-RIRDAMRLVAKM 261
++++I+AY R GL ++A V M+ G V+Y++++ GK G +R + +M
Sbjct: 26 HSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQM 85
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNL 286
G P+ +NSL+ RA +L
Sbjct: 86 LQDGLCPDRKTFNSLLAACSRAGHL 110
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 137/301 (45%), Gaps = 3/301 (0%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++KM G + Y ++ K+G + AA+ L + + P +Y +
Sbjct: 149 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS--AAIRLLRSMEQGNCQPDVV-VYTSI 205
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + + F +M +GI Y SLI + ++ E K L E +
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 265
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ ++ +F +V +EG V + +VV+ M + + +++G R AVK
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 325
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++ ++ +G P V+Y+++IN YC+I KA +F EM +K V YS+++
Sbjct: 326 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 385
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
GR++DA+ L +M +G P+ Y L+D + + L + I NM +
Sbjct: 386 HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQ 445
Query: 307 M 307
+
Sbjct: 446 I 446
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 6/227 (2%)
Query: 57 PSSTHMYKILCDS---LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
P + + IL +S L + G AF +L + + + + +C I EV
Sbjct: 91 PPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVL- 149
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
LF + +G ++ + L+ + G + ++ SM+ + I++
Sbjct: 150 --HLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIID 207
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
K R A ++ ++I QG P TY S+I+A C + + + EM
Sbjct: 208 SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP 267
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
VV +S++V K G++ +A +V M +G EPNV YN+LMD H
Sbjct: 268 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 314
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 104/217 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K R + + F +M K ++ + Y++L+ + ++ A LF E
Sbjct: 342 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 401
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G + D + L+ + +++ + ++++++ + ++ I ++++G +
Sbjct: 402 TRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELE 461
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AA ++ L S+G P TY +IN C+ GL ++A K+F EM++KG+ Y+ +
Sbjct: 462 AARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLIT 521
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ + ++L+ +M +G +V L++M
Sbjct: 522 RGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 558
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 3/240 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M G D Y ++ + KI EK LF E RK +L P++ Y L
Sbjct: 327 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEM-CRK-ELIPNTV-TYSTLMHG 383
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L GR + + F +M +G + D Y L+ + A L K E M D
Sbjct: 384 LCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPD 443
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++++ ++ G +E ++ ++ + L+ + +++NG ++ A K++
Sbjct: 444 IQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFG 503
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P TY I + R + ++ EM +GF V + +V M G
Sbjct: 504 EMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 563
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/225 (18%), Positives = 96/225 (42%), Gaps = 3/225 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ ++ +E+M ++ ++ Y +M +G + ALF E +R P Y
Sbjct: 356 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQ--IPDFVS-Y 412
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL D L K+ R E + + ++ + D +Y +I E++ A +LF
Sbjct: 413 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 472
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ ++ + ++ ++G++ + ++ MK + + C +I GF +
Sbjct: 473 KGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLR 532
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ ++++++G T ++ GL +++ E Q
Sbjct: 533 GIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 16/160 (10%)
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+K + Y + + Q+ S G P T +IN++C + A V ++ + G +
Sbjct: 70 TKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNI 129
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------MHGRAKNLRQ 288
+++++ G+I + + L KM +G +PNV Y +L++ + LR
Sbjct: 130 ATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRS 189
Query: 289 LEK---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
+E+ YT++I + R+ ++E G
Sbjct: 190 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQG 229
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 3/270 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
L++++K+ + G + Y +++ K+G++ L + + L + MY
Sbjct: 174 HQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGK---LVQPNVVMY 230
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ D + K + + +M KGI + Y++LI F ++ ++K A +LF +
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + D+ F LV ++ + G + L++V+ M + + I++ K
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDK 350
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV + +L QG P TY +I+ C G A +F ++ KG+D VV Y M
Sbjct: 351 AVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFY 410
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
+ K G +A L++KM+ GC P+ Y
Sbjct: 411 GFCKKGLFDEASALLSKMEENGCIPDAKTY 440
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 115/255 (45%), Gaps = 3/255 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y F+ D + +LF C R+ + TP + KIL SL KS +L +
Sbjct: 55 YSSTSTTFHSNNDVDDAVSLF-NCLLRQ-NPTPPAIEFNKIL-GSLVKSKHYHTVLYLSK 111
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M+ +GI + LI F + + A +F + + G + F L+ +G
Sbjct: 112 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKG 171
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ + L + + + +++G K AA+ + ++ + P V Y+
Sbjct: 172 QIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYS 231
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+II+ C+ + A ++ EM KG VV YS++++ + G+++DA+ L KM +
Sbjct: 232 TIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISE 291
Query: 265 GCEPNVWIYNSLMDM 279
+P+V+ +N L+D+
Sbjct: 292 NIKPDVYTFNILVDV 306
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 102/221 (46%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+T + L L G+ + L F + G + Y +LI + E + A +L
Sbjct: 155 PNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDL 214
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+ + K + ++ ++ ++ ++ V ++ M + ++ + +++GF
Sbjct: 215 LRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFT 274
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
AV ++ ++IS+ P T+ +++ +C+ G S A K+ EM +G +V
Sbjct: 275 VGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVT 334
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
YSS++ KT R+ A+ L+ K+K +G PN+ Y L+D
Sbjct: 335 YSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILID 375
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 11/225 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M S GI + Y ++ F+ +G + LF + S + + + IL D
Sbjct: 250 YSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIK---PDVYTFNILVDV 306
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KSG+ LK +M ++G + Y+S++ + V A L + +++G+ +
Sbjct: 307 FCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPN 366
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ G +E + E + +I+ V+ GF K+ + A +
Sbjct: 367 MHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLS 426
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
++ GCIP TY I ++ L+ K E +M +K +C
Sbjct: 427 KMEENGCIPDAKTYELI-----KLSLFKKGEN---DMAEKLHREC 463
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 16/273 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L K+GR+ E K F M ++G+ D + Y +L+ +A+ + L
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMV 363
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D VF L+ Y ++ V++ + V M+ LN + ++ K +
Sbjct: 364 RNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD 423
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ +EQ+I +G P + Y S+I++ C + KAE++ +EM +G + ++S++
Sbjct: 424 DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSII 483
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------- 291
+ K GR+ ++ +L M G +PNV Y++L+D + A + + K
Sbjct: 484 HSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMK 543
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y T+I+ Y D + + E +G
Sbjct: 544 PDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 121/271 (44%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH + G D Y ++ F+K GDS+K + + E R++ +P Y +
Sbjct: 181 LHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRI--SPDVV-TYSSI 237
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+L K + ++ M + G++ + Y S++ + S + K A K+ G+
Sbjct: 238 IAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGV 297
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ + G + ++ +SM L C ++ G++ + A
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHA 357
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + ++ G P + +I AY + +A VF +M+Q G + VV Y +++ +
Sbjct: 358 LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K+G + DAM +M +G PN+ +Y SL+
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 7/274 (2%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKV-AALFLECESRKLDLTPSSTHMYKILCDSLG 71
M GI D + ++ A+ K EKV A+ + + R+ L P+ Y + L
Sbjct: 362 MVRNGIHPDHHVFNILICAYAK---QEKVDEAMLVFSKMRQHGLNPNVV-TYGAVIGILC 417
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
KSG + + +F M ++G+ + VY SLI S + AEEL E ++G+ +
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F ++ + +EG V ++ ++ + M + + +++G+ A K+ +
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S G P VTY ++IN YCR+ A +F EM G ++ Y+ ++ T R
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
A L + G + + YN + +HG KN
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNII--LHGLCKN 629
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 126/287 (43%), Gaps = 24/287 (8%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S T + K LCD +S A E+L D + G D Y ++I F + A
Sbjct: 160 SCTILLKGLCDE-NRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCIS-CVIVNGF 175
+ E ++ + D+ + ++ + ++K +EV+ +M KN + +C++ I++G+
Sbjct: 219 YHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVM--PNCMTYNSILHGY 276
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
A+ +++ S G P VTY S+++ C+ G ++A K+F M ++G + +
Sbjct: 277 CSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
Y +++ Y G + + L+ M G P+ ++N L
Sbjct: 337 ATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNIL------------------- 377
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
I AY + D + +++ R +G + G ++G+ K +++
Sbjct: 378 ICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDD 424
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 8/242 (3%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TP+ H Y IL ++GR ++ +KG + + L+ + A
Sbjct: 83 VTPT-VHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141
Query: 115 EEL-FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS--DCIS-CV 170
++ + E + D+ L+ +E ++ LE++ M + S D +S
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT 201
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++NGF K A Y +++ + P VTY+SII A C+ KA +V M + G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLR 287
+ Y+S++ Y + + ++A+ + KM+ G EP+V YNSLMD +GR+ R
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321
Query: 288 QL 289
++
Sbjct: 322 KI 323
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 3/265 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y+E+M G+ + Y ++ + +K L LE R + L +T + +
Sbjct: 428 YFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL---NTIFFNSIIH 484
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
S K GR E K F M G+ + Y++LI + ++ A +L GM
Sbjct: 485 SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP 544
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ Y ++ L + + M ++ ++ + +I+ G R AA ++Y
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 604
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ G TY I++ C+ L +A ++F + ++ M+ K
Sbjct: 605 VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 664
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIY 273
GR +A L G PN W Y
Sbjct: 665 GRNDEAKDLFVAFSSNGLVPNYWTY 689
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 134/284 (47%), Gaps = 5/284 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E++KS V D+ Y ++ K G + + LF + + L T Y I+ D
Sbjct: 540 FEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL---DTRAYNIVIDG 596
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G+ + + +MK KG Y S+I A I + A LF+EA+ K + +
Sbjct: 597 FCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ L+ + + G +++ ++E + L + +++ K A+ ++
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 716
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ C P QVTY +IN C++ ++KA + EMQ++G ++Y++M++ K G
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYT 293
I +A L + K G P+ YN++++ G + R ++ ++
Sbjct: 777 NIAEAGALFDRFKANGGVPDSACYNAMIE--GLSNGNRAMDAFS 818
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 158/352 (44%), Gaps = 25/352 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+E+M D +C +++ K+G D+ K+ L+ + R +++ +Y L
Sbjct: 435 FEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCR------TNSIVYTSL 488
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ GR + K ++DM + D + + + E + +F+E + +
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRF 548
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D + L+ I+ G +T E+ SMK + ++++GF K A +
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ E++ ++G P VTY S+I+ +I +A +F E + K + VV YSS++ +G
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------KNLRQLE------ 290
K GRI +A ++ ++ KG PNV+ +NSL+D +A +++++L+
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y +I+ R+F+ F+ E + G M+ +K I E
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 106/211 (50%), Gaps = 3/211 (1%)
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
C K F++++ R K + S Y +LI +F+++ + LF++ +E G
Sbjct: 143 CVKANKLREGFDVVQNMRKFKFRPAF---SAYTTLIGAFSAVNHSDMMLTLFQQMQELGY 199
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ +F L+ + +EG V+ L +++ MK++ L+ + V ++ F K A K
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 259
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ + G P +VTY S+I C+ +A ++F +++ C AY++M+ YG
Sbjct: 260 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 319
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G+ +A L+ + + KG P+V YN ++
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 114/253 (45%), Gaps = 3/253 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G VLD+ Y +++ F K G K L E +++ + T + Y + D L K
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT---YGSVIDGLAK 634
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R E F + K K I + +Y+SLI F + + A + +E +KG+ ++
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYT 694
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ ++ + + L +SMK + + +++NG K R + A ++++
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
QG P ++Y ++I+ + G ++A +F + G Y++M+ R
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAM 814
Query: 253 DAMRLVAKMKPKG 265
DA L + + +G
Sbjct: 815 DAFSLFEETRRRG 827
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 125/283 (44%), Gaps = 6/283 (2%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
+S L +++M+ G + ++ F K G + +L E +S LD +
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLD---ADI 238
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+Y + DS GK G+ KFF +++ G+ D Y S+I + A E+F+
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRR 179
E+ + + +++ Y G ++ ++E + A+ +I I+ I+ K
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR-AKGSIPSVIAYNCILTCLRKMG 357
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A++V+E++ + P TY +I+ CR G A ++ MQ+ G V +
Sbjct: 358 KVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVN 416
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
MV K+ ++ +A + +M K C P+ + SL+D G+
Sbjct: 417 IMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGK 459
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/306 (18%), Positives = 121/306 (39%), Gaps = 19/306 (6%)
Query: 53 LDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVK 112
L+ P + +L L RA E +++ E + P Y SL+ A
Sbjct: 59 LNFKPQPEFVIGVL-RRLKDVNRAIEYFRWYERRTE--LPHCPESYNSLLLVMARCRNFD 115
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
+++ E G + +++VL ++ + + +VV++M+ + + ++
Sbjct: 116 ALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLI 175
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
FS + +++Q+ G P + ++I + + G A + EM+ D
Sbjct: 176 GAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLD 235
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL------ 286
+V Y+ + +GK G++ A + +++ G +P+ Y S++ + +A L
Sbjct: 236 ADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEM 295
Query: 287 -RQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
LEK Y T+I Y A +FD R G + ++ K
Sbjct: 296 FEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRK 355
Query: 337 LSQIEE 342
+ +++E
Sbjct: 356 MGKVDE 361
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 139/324 (42%), Gaps = 55/324 (16%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+ ++ G + Y I+ K+G ++ +F E K D P+ + Y IL D L
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVF---EEMKKDAAPNLS-TYNILIDML 387
Query: 71 GKSGR---AFEILKFFRD-MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
++G+ AFE+ RD M++ G+ + ++ ++ A +F++ + K
Sbjct: 388 CRAGKLDCAFEL----RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVC 443
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D F L+ + G V+ ++ E M +++ + + ++ F K
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 187 VYEQLISQGC-----------------------------------IPGQVTYASIINAYC 211
+Y+ +++Q C +P +Y+ +I+
Sbjct: 504 IYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLI 563
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVV---AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+ G ++ ++F M+++G CV+ AY+ ++ + K G++ A +L+ +MK KG EP
Sbjct: 564 KAGFANETYELFYSMKEQG---CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 269 NVWIYNSLMDMHGRAKNLRQLEKY 292
V Y S++D G AK R E Y
Sbjct: 621 TVVTYGSVID--GLAKIDRLDEAY 642
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 16/262 (6%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D + + Y IL +L G E L RDM+ G + Y +L+ +F EV
Sbjct: 151 DGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDR 210
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
AE L E G+ +L F +V + G +E +V + M L +V
Sbjct: 211 AERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVG 270
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G+ K A+ V+ ++ +G +P VT+ S+I+ C+ G +A + EM+++G
Sbjct: 271 GYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQM 330
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLE 290
+ +++++ + K G + DA+ V +M+ +P+V YN+L++ M GR R+L
Sbjct: 331 NEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELV 390
Query: 291 K-------------YTTVISAY 299
+ Y+T++SAY
Sbjct: 391 REMEAKGVKPDVVTYSTILSAY 412
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 4/289 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M+ G+ + + ++ K G E +F E K L P Y L
Sbjct: 216 DMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDE--MVKEGLAPDGVS-YNTLVGGY 272
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G + E L F +M KGI+ D + SLI ++ A L +E E+G+ +
Sbjct: 273 CKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNE 332
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ + ++G ++ L V M+ + S ++NG+ A ++ +
Sbjct: 333 ITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVRE 392
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ ++G P VTY++I++AYC+ G A ++ +M + G + YSS++ + + R
Sbjct: 393 MEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKR 452
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLEKYTTVISA 298
+ DA L M G +P+ Y SL+D H + N+ R L + ++ A
Sbjct: 453 LGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKA 501
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 1/195 (0%)
Query: 95 PSVYA-SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
PSV A + + S A + A F G+ ++ + LV G ++ L V+
Sbjct: 121 PSVLAYNAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVL 180
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M+ A + + +V F + A ++ + + G P VT+ S++N C+
Sbjct: 181 RDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKA 240
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G A KVF EM ++G V+Y+++V Y K G +A+ + A+M KG P+V +
Sbjct: 241 GRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTF 300
Query: 274 NSLMDMHGRAKNLRQ 288
SL+ + +A NL +
Sbjct: 301 TSLIHVMCKAGNLER 315
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 112/262 (42%), Gaps = 20/262 (7%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
CY ++ + +G ++ L E E++ + Y + + K+G +
Sbjct: 369 CYNALINGYCMVGRMDEARELVREMEAKGVK---PDVVTYSTILSAYCKNGDTHSAFQLN 425
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+ M E G+L D Y+SLI + A LFK G+ D + L+ + +E
Sbjct: 426 QQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKE 485
Query: 144 GMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G VE+ L + + M A + + D ++ V++NG SK A ++ +L + +P +
Sbjct: 486 GNVERALSLHDEMVKAGV-LPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIK 544
Query: 203 Y---------------ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
Y +++ +C GL ++A+KV+ + + ++ YS ++ + +
Sbjct: 545 YDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCR 604
Query: 248 TGRIRDAMRLVAKMKPKGCEPN 269
G + A+ +M G PN
Sbjct: 605 EGNVMKALSFHKQMLQCGFAPN 626
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 104/225 (46%), Gaps = 3/225 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + +M+ G+ ++ + +++ F K G + AL E R+ + PS
Sbjct: 312 NLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDD--ALLAVREMRQCRIQPSVV- 368
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L + GR E + R+M+ KG+ D Y++++ ++ + A +L ++
Sbjct: 369 CYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQM 428
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G+L D + L+ + EE + + ++M + L + +++G K
Sbjct: 429 LENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNV 488
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
A+ ++++++ G +P VTY+ +IN + +A+++ ++
Sbjct: 489 ERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKL 533
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+A + ++ ++S G P TY ++ A C G +A V +M+ G D V Y+++V
Sbjct: 140 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLV 199
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
A + + G + A RLV M+ G +PN+ +NS+++ GR ++ R++
Sbjct: 200 AAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKV 249
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G P + Y +++ A L S A + F M G V Y+ +V G ++A
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ ++ M+ GC+PN YN+L+ RA + + E+
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAER 213
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 127/304 (41%), Gaps = 38/304 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+EKMK+ D Y +++ F D + V + E E D + IL D+
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK---DGHVPDVVTFTILVDA 372
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G E M+++GIL + Y +LIC + + A ELF E G+
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCV----------------- 170
++ + Y + G LE E MK + NI C + +
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 492
Query: 171 ----------------IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
++ +SK A+K+ +++ GC P + S+IN +
Sbjct: 493 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 552
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A K+F+ M++ VV Y++++A GK G+I++A+ L M KGC PN +N
Sbjct: 553 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 612
Query: 275 SLMD 278
+L D
Sbjct: 613 TLFD 616
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 3/250 (1%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
++ K G+ + L+ + S + D +P++ Y L D L KSGR +E + F M
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDR-DFSPTAC-TYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+ G + ++Y LI F E A LFK ++G+ DL+ + LV G V+
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 978
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL-ISQGCIPGQVTYASI 206
+ L + +K + LN +I+NG K A+ ++ ++ S+G P TY S+
Sbjct: 979 EGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I G+ +A K++ E+Q+ G + V +++++ Y +G+ A + M G
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Query: 267 EPNVWIYNSL 276
PN Y L
Sbjct: 1099 SPNTGTYEQL 1108
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 121/258 (46%), Gaps = 7/258 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYK 64
L + M+S G+ + Y ++ + K GDS F + +++ + ++ + +Y
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY- 476
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
SL K+GR E + F +K+ G++ D Y ++ ++ + E+ A +L E E
Sbjct: 477 ----SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G D+ V L+ + V++ ++ MK +L + ++ G K A
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++++E ++ +GC P +T+ ++ + C+ + A K+ +M G V Y++++
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFG 652
Query: 245 YGKTGRIRDAMRLVAKMK 262
K G++++AM +MK
Sbjct: 653 LVKNGQVKEAMCFFHQMK 670
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 127/304 (41%), Gaps = 22/304 (7%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLIC--SFASIAEVKVAE 115
S Y L LGK ++ ++M+ G+ P+VY IC ++ A
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGL--KPNVYTFTICIRVLGRAGKINEAY 278
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
E+ K +++G D+ + L+ ++ EV E MK +++ F
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
S R + + + ++ G +P VT+ +++A C+ G + +A M+ +G +
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----LRQLEK 291
Y++++ + R+ DA+ L M+ G +P + Y +D +G++ + L EK
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 292 YTTVISAYNM-------------AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
T A N+ R+ + FY + G V D +M+ +SK+
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG-LKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 339 QIEE 342
+I+E
Sbjct: 518 EIDE 521
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 108/240 (45%), Gaps = 4/240 (1%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F +K G + D + Y L+ ++ ++ EL+KE + ++ ++
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 143 EGMVEKTLEVV-ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
G V+ L++ + M + + + + C +++G SK + A +++E ++ GC P
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
Y +IN + + G A +F M ++G + YS +V GR+ + + ++
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
K G P+V YN +++ G++ +LE+ + + +R + YN +N G+
Sbjct: 988 KESGLNPDVVCYNLIINGLGKS---HRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 124/305 (40%), Gaps = 75/305 (24%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ ++KS G + D Y +++A+ K G +++ L+ E + + + ++T + I+
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE---ANTITHNIVISG 864
Query: 70 LGKSGRAFEILKFFRD-MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K+G + L + D M ++ Y LI + + A++LF
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF---------- 914
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
EGM++ ++ N +++NGF K AA ++
Sbjct: 915 --------------EGMLDYGCRPNCAIYN-----------ILINGFGKAGEADAACALF 949
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++ +G P TY+ +++ C +G + F E+++ G + VV Y+ ++ GK+
Sbjct: 950 KRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKS 1009
Query: 249 GRIRDAMRLVAKMKPK------------------------------------GCEPNVWI 272
R+ +A+ L +MK G EPNV+
Sbjct: 1010 HRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1069
Query: 273 YNSLM 277
+N+L+
Sbjct: 1070 FNALI 1074
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 141/371 (38%), Gaps = 57/371 (15%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ Y +M G Y +M K D + V L E E+ L L P+ + + I
Sbjct: 208 MEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET--LGLKPN-VYTFTIC 264
Query: 67 CDSLGKSGR---AFEILK--------------------------------FFRDMKEKGI 91
LG++G+ A+EILK F MK
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D Y +L+ F+ ++ ++ + E E+ G + D+ F LV + G + +
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
++ M++ + + ++ G + A++++ + S G P TY I+ Y
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ G A + F +M+ KG +VA ++ + K GR R+A ++ +K G P+
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 272 IYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
YN +M Y+ E D +K +E NG D + ++
Sbjct: 505 TYNMMM-------------------KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 332 GVFSKLSQIEE 342
K +++E
Sbjct: 546 NTLYKADRVDE 556
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 19 VLDSGC------YCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILCDSL 70
+LD GC Y ++ F K G+++ ALF + E + DL Y +L D L
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL-----KTYSVLVDCL 971
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE-EKGMLRD 129
GR E L +F+++KE G+ D Y +I ++ A LF E + +G+ D
Sbjct: 972 CMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPD 1031
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + L+L GMVE+ ++ ++ A L + ++ G+S A VY+
Sbjct: 1032 LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091
Query: 190 QLISQGCIPGQVTYASIIN 208
+++ G P TY + N
Sbjct: 1092 TMVTGGFSPNTGTYEQLPN 1110
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 134/349 (38%), Gaps = 75/349 (21%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-----CES----------------- 50
+K G+V DS Y +M+ + K+G+ ++ L E CE
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR 553
Query: 51 -----------RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA 99
+++ L P+ Y L LGK+G+ E ++ F M +KG + +
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVV-TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 612
Query: 100 SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA 159
+L EV +A ++ + + G + D+ + ++ ++ G V++ + MK
Sbjct: 613 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-- 670
Query: 160 ELNISDCIS-CVIVNGFSKR----------------------RAYW-------------- 182
+L D ++ C ++ G K +W
Sbjct: 671 KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGID 730
Query: 183 AAVKVYEQLISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK-GFDKCVVAYSS 240
AV E+L++ G C G II C+ S A +F + + G + Y+
Sbjct: 731 NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNL 790
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
++ + I A + ++K GC P+V YN L+D +G++ + +L
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 85/225 (37%), Gaps = 52/225 (23%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE---- 225
+++ G + A V+ Q+ S GCIP TY +++AY + G + +++ E
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH 849
Query: 226 --------------------------------MQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
M + F Y ++ K+GR+ +
Sbjct: 850 ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 909
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRA---------------KNLR-QLEKYTTVIS 297
A +L M GC PN IYN L++ G+A + +R L+ Y+ ++
Sbjct: 910 AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 969
Query: 298 AYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
M D + ++ E + +G D +++ K ++EE
Sbjct: 970 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 105/280 (37%), Gaps = 40/280 (14%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P +T + L D L K+ LK M + G + D Y ++I +VK A
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 664
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM------KNAELNISDCISCV 170
F + + K + D L+ ++ ++E +++ + + A L D I +
Sbjct: 665 FFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSI 723
Query: 171 ----------------IVNGFS---------------KRRAYWAAVKVYEQLISQ-GCIP 198
+ NG K A ++E+ G P
Sbjct: 724 LAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQP 783
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
TY +I + A+ VF++++ G V Y+ ++ YGK+G+I + L
Sbjct: 784 KLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELY 843
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKYTTVIS 297
+M CE N +N ++ +A N+ L+ Y ++S
Sbjct: 844 KEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 59/151 (39%), Gaps = 39/151 (25%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LHY++++K +G+ D CY ++
Sbjct: 981 LHYFKELKESGLNPDVVCY--------------------------------------NLI 1002
Query: 67 CDSLGKSGRAFEILKFFRDMK-EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+ LGKS R E L F +MK +GI D Y SLI + V+ A +++ E + G
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
+ ++ F L+ Y G E V ++M
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 3/207 (1%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
AF++L+ R K + S Y +LI + + + E LF + +E G ++ +
Sbjct: 45 AFDLLQMMRHFKFRPAF---SAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTT 101
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
L+ ++ EG V+ L +++ MK+ + + V ++ F K A K + ++ + G
Sbjct: 102 LIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANG 161
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
+P VTY S++ C+ +A ++F +M+Q C AY++M+ YG G+ +A
Sbjct: 162 LVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAY 221
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGR 282
L+ + + KGC P+V YN ++ G+
Sbjct: 222 SLLERQRAKGCIPSVVAYNCILTCLGK 248
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 3/279 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y MK G VLD+ Y +++ F K G K L LE E + + P+ Y + D
Sbjct: 468 YYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQL-LE-EMKTMGHHPTVV-TYGSVVDG 524
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K R E F + K GI + +Y+SLI F + V A + +E +KG+ +
Sbjct: 525 LAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPN 584
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ ++ + + L +SMK+ + + C+++NG K R + A ++
Sbjct: 585 VYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQ 644
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ QG P +TY ++I+ + G ++A +F + G +Y++M+
Sbjct: 645 EMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIAN 704
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
R DA +L + + KGC + +L+D +A+ L Q
Sbjct: 705 RALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQ 743
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 133/283 (46%), Gaps = 5/283 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E++K+ G + D+ Y ++ + K G + + L+ + + L T Y + D
Sbjct: 433 FEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVL---DTRAYNTVIDG 489
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KSG+ + + +MK G Y S++ A I + A LF+EA+ G+ +
Sbjct: 490 FCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELN 549
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ L+ + + G V++ V+E M L + +++G K A+ ++
Sbjct: 550 QVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQ 609
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ C P Q+TY +IN C++ ++KA + EMQ++G + Y++M++ K+G
Sbjct: 610 SMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSG 669
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+ A L + + G P+ YN++++ G + R L+ Y
Sbjct: 670 NVAQASSLFERFRASGGIPDSASYNAMIE--GLSIANRALDAY 710
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 165/400 (41%), Gaps = 84/400 (21%)
Query: 3 SQSKLHYYEKMK--------SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE------- 47
+ L +E+MK + I++ C +EA +K+ D+ K A LF
Sbjct: 252 TDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIM 311
Query: 48 ----CESRKLDLTPS--STHMYKI----------LCDSLGKSGRAFEILKFFRDMKEKGI 91
C+++KLD S YK+ L D LGK GR + + + M +
Sbjct: 312 IDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQ 371
Query: 92 LEDPSVYASLI------------------------------------CSFASIAEVKVAE 115
+ + VY SLI C F + E +
Sbjct: 372 IPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKA-GETEKGR 430
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
LF+E + +G L D + L+ ++ G +T E+ +MK+ + +++GF
Sbjct: 431 ALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGF 490
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A ++ E++ + G P VTY S+++ +I +A +F E + G +
Sbjct: 491 CKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQ 550
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------KN 285
V YSS++ +GK GR+ +A ++ +M KG PNV+ +N L+D +A ++
Sbjct: 551 VIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQS 610
Query: 286 LRQLE------KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
++ L+ Y +I+ R+F+ F+ E + G
Sbjct: 611 MKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQG 650
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 125/265 (47%), Gaps = 6/265 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ A ++G+S+++ ALF + + ++ + H+ L + GR L
Sbjct: 64 YTTLIGALSEVGESDRMLALFNQMQELGYEV---NVHLLTTLIRVFSREGRVDAALSLLD 120
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+MK D +Y I F + +V +A + F E + G++ D + ++ + +
Sbjct: 121 EMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKAN 180
Query: 145 MVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
+++ +E+ E M +N ++ + + +I+ G+ + A + E+ ++GCIP V Y
Sbjct: 181 RLDEAVEIFEQMEQNRQVPCAYAYNTMIM-GYGSAGKFDEAYSLLERQRAKGCIPSVVAY 239
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
I+ + G KA ++F EM++ + Y+ ++ M K G + A ++ MK
Sbjct: 240 NCILTCLGKKGKTDKALRIFEEMKRDAMPN-LPTYNIIIGMLCKAGNVEAAFKVRDAMKE 298
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQ 288
G PNV N ++D +A+ L +
Sbjct: 299 AGLFPNVRTINIMIDRLCKAQKLDE 323
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 141/348 (40%), Gaps = 20/348 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+ ++ G + Y I+ K G ++K +F E K D P+ Y I+ L
Sbjct: 225 ERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIF---EEMKRDAMPN-LPTYNIIIGML 280
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+G K MKE G+ + +I ++ A +F+ + K D
Sbjct: 281 CKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDG 340
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ ++G V+ + E M +A+ + + ++ F K K+Y++
Sbjct: 341 ATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKE 400
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ GC P + + ++ + G K +F E++ +GF +YS ++ K G
Sbjct: 401 MMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGF 460
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEK-------------YTT 294
R+ L MK +GC + YN+++D G+ QL + Y +
Sbjct: 461 ARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGS 520
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
V+ D + E + NG +++ + ++ F K+ +++E
Sbjct: 521 VVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDE 568
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 19/145 (13%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P Y ++I A +G + +F +MQ+ G++ V ++++ ++ + GR+ A+ L
Sbjct: 59 PAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSL 118
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
+ +MK + ++ +YN +D G+ + DM KF++E +
Sbjct: 119 LDEMKSNTFDADIVLYNVCIDCFGKVGKV-------------------DMAWKFFHEMKA 159
Query: 318 NGGVIDRAMAGIMVGVFSKLSQIEE 342
NG V D M+GV K ++++E
Sbjct: 160 NGLVPDDVTYTSMMGVLCKANRLDE 184
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 139/332 (41%), Gaps = 22/332 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KMK + + ++ F K+G ++ V F + T Y I+ D
Sbjct: 83 FSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT---VFTYNIMIDC 139
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K G F +MK +G++ D Y S+I F + + F+E ++ D
Sbjct: 140 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 199
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + G + LE MK L + +V+ F K A+K Y
Sbjct: 200 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 259
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G +P + TY S+I+A C+IG S A ++ EM Q G + VV Y++++
Sbjct: 260 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 319
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
R+++A L KM G PN+ YN+L +HG K A+ D +
Sbjct: 320 RMKEAEELFGKMDTAGVIPNLASYNAL--IHGFVK-----------------AKNMDRAL 360
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ NE + G D + G + L +IE
Sbjct: 361 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 392
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E ++ F MK + L+ FA + + + FK+ G + + ++
Sbjct: 78 EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMI 137
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
+EG VE + E MK L +++GF K V +E++ C
Sbjct: 138 DCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE 197
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P +TY ++IN +C+ G + + EM+ G VV+YS++V + K G ++ A++
Sbjct: 198 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 257
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
M+ G PN + Y SL+D + + NL
Sbjct: 258 YVDMRRVGLVPNEYTYTSLIDANCKIGNL 286
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 133/290 (45%), Gaps = 7/290 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +Y +MK G+ + Y +++AF K G ++ +++ R++ L P+ + Y L
Sbjct: 220 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM--RRVGLVPNE-YTYTSL 276
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K G + + +M + G+ + Y +LI +K AEELF + + G+
Sbjct: 277 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 336
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ +L + L+ +++ +++ LE++ +K + + + G AA
Sbjct: 337 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 396
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V ++ G + Y ++++AY + G ++ + EM++ + VV + ++
Sbjct: 397 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 456
Query: 247 KTGRIRDAMRLVAKMKPK-GCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
K + A+ ++ G + N I+ +++D G K+ Q+E TT+
Sbjct: 457 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMID--GLCKD-NQVEAATTL 503
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 117/284 (41%), Gaps = 4/284 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + +Y M+ G+V + Y +++A KIG+ L E ++ + Y
Sbjct: 252 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT---Y 308
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D L + R E + F M G++ + + Y +LI F + A EL E +
Sbjct: 309 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 368
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ DL ++ + +E V+ MK + + I +++ + K
Sbjct: 369 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 428
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK-GFDKCVVAYSSMV 242
+ + +++ VT+ +I+ C+ L SKA F + G +++M+
Sbjct: 429 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 488
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
K ++ A L +M KG P+ Y SLMD + + N+
Sbjct: 489 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 532
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 125/274 (45%), Gaps = 8/274 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILC 67
+ KM +AG++ + Y ++ F K + ++ L E + R K DL T ++ LC
Sbjct: 328 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG-LC 386
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
SL K A ++ +MKE GI + +Y +L+ ++ L E +E +
Sbjct: 387 -SLEKIEAAKVVMN---EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 442
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA-ELNISDCISCVIVNGFSKRRAYWAAVK 186
+ F L+ + +V K ++ + N L + I +++G K AA
Sbjct: 443 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 502
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++EQ++ +G +P + Y S+++ + G +A + +M + G ++AY+S+V
Sbjct: 503 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLS 562
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+++ A + +M +G P+ + S++ H
Sbjct: 563 HCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKH 596
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 103/217 (47%), Gaps = 8/217 (3%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK GI +S Y +M+A++K G+ + L L E ++LD+ + + +L D L
Sbjct: 400 EMKECGIKANSLIYTTLMDAYFKSGNPTE--GLHLLDEMKELDIEVTVV-TFCVLIDGLC 456
Query: 72 KSGRAFEILKFF-RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+ + + +F R + G+ + +++ ++I +V+ A LF++ +KG++ D
Sbjct: 457 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 516
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ ++G V + L + + M + + +V G S A E+
Sbjct: 517 TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 576
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
+I +G P +V S++ + +G +A +E+Q
Sbjct: 577 MIGEGIHPDEVLCISVLKKHYELGCIDEA----VELQ 609
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 132/279 (47%), Gaps = 10/279 (3%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
+ S + +++MK + Y ++ ++K+G EK LF E ++ +P+ +
Sbjct: 249 NDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM--KRAGCSPT-VYT 305
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L LGK+GR E F++DM G+ D +L+ + V EEL
Sbjct: 306 YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV---EELTNVFS 362
Query: 123 EKGMLRDLEVFLK----LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E GM R + + ++ + V + + MK ++ S+ ++++G+ K
Sbjct: 363 EMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT 422
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A+ + E++ +G P Y S+INA + Y A ++F E+++ + Y
Sbjct: 423 NRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVY 482
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ M+ +GK G++ +A+ L +MK +G P+V+ YN+LM
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 4 QSKLH------YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP 57
+SK H +++KMK+ + Y +++ + K EK L E + + P
Sbjct: 385 ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++ Y L ++LGK+ R + F+++KE VYA +I F ++ A +L
Sbjct: 445 AA---YCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK----NAELNISDCISCVIVN 173
F E + +G D+ + L+ ++ GM+ + ++ M+ A++N + +I+N
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHN----IILN 557
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
GF++ A++++E + G P VTY +++ + G++ +A ++ EM+ KGF+
Sbjct: 558 GFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEY 617
Query: 234 CVVAYSSMVAMYGKTGRIRD 253
+ YSS++ G +D
Sbjct: 618 DAITYSSILDAVGNVDHEKD 637
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
K D S Y IL D K+ R + L +M EKG P+ Y SLI +
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+ A ELFKE +E V+ ++ + + G + + +++ MKN +
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++G K A + ++ GC ++ I+N + R G+ +A ++F ++ G
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
V Y++++ + G +A R++ +MK KG E + Y+S++D G
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVG 630
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 157/350 (44%), Gaps = 21/350 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E +++ + + ++++A + K ++F + + RK T SST+ IL L
Sbjct: 151 EVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPT-SSTYNSVILM--L 207
Query: 71 GKSGRAFEILKFFRDMKEKG-ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G+ ++ + + +M +G D Y++LI S+ + A LF E ++ M
Sbjct: 208 MQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPT 267
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+++ L+ +Y + G VEK L++ E MK A + + ++ G K A Y+
Sbjct: 268 EKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYK 327
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKT 248
++ G P V +++N ++G + VF EM VV+Y++++ A++
Sbjct: 328 DMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESK 387
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----KNLRQLEK------------Y 292
+ + KMK P+ + Y+ L+D + + K L LE+ Y
Sbjct: 388 AHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAY 447
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++I+A A+ ++ + + E + N G + + +M+ F K ++ E
Sbjct: 448 CSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE 497
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 119/272 (43%), Gaps = 32/272 (11%)
Query: 80 LKFFR-DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL------EV 132
++FF+ K + D S Y +LI + E ++ E+++ +E ++R+ V
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLI---RCLEEARLYGEMYRTIQE--VVRNTYVSVSPAV 164
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+LV MV K L V K + + ++ + + +VY ++
Sbjct: 165 LSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMC 224
Query: 193 SQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
++G C P +TY+++I++Y ++G A ++F EM+ Y++++ +Y K G++
Sbjct: 225 NEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKV 284
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
A+ L +MK GC P V+ Y L+ G+A + D F
Sbjct: 285 EKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV-------------------DEAYGF 325
Query: 312 YNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
Y + +G D ++ + K+ ++EEL
Sbjct: 326 YKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 13/241 (5%)
Query: 78 EILKFFRDMKEKGILED-PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
E L FF + + P++YA++I A +A L E E+ + +V L +
Sbjct: 121 EALTFFHHVVPSLPADSLPALYAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQVILAI 180
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISD-CISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
+ Y+ GM + E+ M+ + D + ++ SK+R A +++ S
Sbjct: 181 IRRYVRAGMSPEASELFRRMEEYGAGVPDPAVLASLLGALSKKRLAGEAQALFDSYKSV- 239
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDA 254
P V Y ++++A+CR G KAE+VF EMQQ G V Y+S++ AMY + G++ A
Sbjct: 240 FPPDVVLYTTLVHAWCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMY-RAGQVPRA 298
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREF--DMCVKFY 312
L+ +M GC PN +N++M H +A Q V+ +N R+ D + Y
Sbjct: 299 QELLCQMMETGCPPNTATFNAIMRAHVKAGRSEQ------VLQVHNQMRQLGCDPDIITY 352
Query: 313 N 313
N
Sbjct: 353 N 353
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 17/277 (6%)
Query: 10 YEKMKSAGI-VLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ +M+ G V D ++ A K + + ALF +S + P +Y L
Sbjct: 197 FRRMEEYGAGVPDPAVLASLLGALSKKRLAGEAQALFDSYKS----VFPPDVVLYTTLVH 252
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ ++G + + F +M++ GI+ + Y S+I + +V A+EL + E G
Sbjct: 253 AWCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPP 312
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF-------SKRRAY 181
+ F ++ +++ G E+ L+V M+ C +I F +
Sbjct: 313 NTATFNAIMRAHVKAGRSEQVLQVHNQMRQL-----GCDPDIITYNFLMETHCGKGQSNL 367
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AA+KV ++I++GCIP T+ ++ G A +++ MQ+ VV Y+ +
Sbjct: 368 DAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNLL 427
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ ++ K + +R+ M +G EPNV Y +L++
Sbjct: 428 MKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIE 464
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 5/281 (1%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H ++M+ I + S I+ + + G S + + LF E + P + +L
Sbjct: 160 HLLDEMRERSIPVSSQVILAIIRRYVRAGMSPEASELFRRMEEYGAGV-PDPAVLASLL- 217
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+L K A E F D + D +Y +L+ ++ + AE++F E ++ G++
Sbjct: 218 GALSKKRLAGEAQALF-DSYKSVFPPDVVLYTTLVHAWCRAGCLDKAEQVFAEMQQAGIM 276
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ + ++ G V + E++ M + I+ K ++V
Sbjct: 277 PNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPPNTATFNAIMRAHVKAGRSEQVLQV 336
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYS--KAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ Q+ GC P +TY ++ +C G + A KV +M KG ++ M+ +
Sbjct: 337 HNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMIAKGCIPDCHTFNPMLKLV 396
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
TG + A RL +M+ C+PNV YN LM + + K++
Sbjct: 397 LGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLFNKEKSM 437
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 118/259 (45%), Gaps = 6/259 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ AGI+ + Y +++A Y+ G + L C+ + P +T + + +
Sbjct: 267 FAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELL--CQMMETG-CPPNTATFNAIMRA 323
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE--VKVAEELFKEAEEKGML 127
K+GR+ ++L+ M++ G D Y L+ + + + A ++ + KG +
Sbjct: 324 HVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMIAKGCI 383
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D F ++ + + G VE + E M+ + + +++ F+K ++ +++
Sbjct: 384 PDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLFNKEKSMDMVLRI 443
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM-QQKGFDKCVVAYSSMVAMYG 246
+ + +QG P TY ++I ++C G + +A EM ++K Y ++ +
Sbjct: 444 KKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHATLREMVEEKSLKPTKPVYDMVLMLLR 503
Query: 247 KTGRIRDAMRLVAKMKPKG 265
K G++R LV M +G
Sbjct: 504 KAGQLRKHEELVELMADRG 522
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 131/281 (46%), Gaps = 4/281 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
S + +++MK G+ + Y ++ ++K+ EK + E + + LT Y
Sbjct: 251 DSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLT---VFTY 307
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
LGK+GR + + F DM + G D + SLI + ++V +LF++ E
Sbjct: 308 TEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMES 367
Query: 124 KGMLRDLEVFLKLVLMYIE-EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++ + ++ E + + E MK + S ++++GF K
Sbjct: 368 WQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIE 427
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + E++ +G P Y S+IN+ ++ Y A ++F+E+++ Y+ M+
Sbjct: 428 KALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMI 487
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+GK GR+ +A+ L +M+ G +P+V+ YN+LM RA
Sbjct: 488 KHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRA 528
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 117/248 (47%), Gaps = 11/248 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++EKMK GI S Y +++ F K EK L E + + P++ Y L +
Sbjct: 397 WFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAA---YCSLIN 453
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
SLGK R + F ++KE VYA +I F + A +LF E E+ G
Sbjct: 454 SLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKP 513
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMK----NAELNISDCISCVIVNGFSKRRAYWAA 184
D+ + L+ + GM+++ ++ +M + +LN + +I+NG ++ A
Sbjct: 514 DVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHN----IILNGLARTGVPDRA 569
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++++ ++ S P V+Y +++ GL+ +A K+ EM KGF+ + Y+S++
Sbjct: 570 IEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEA 629
Query: 245 YGKTGRIR 252
GK R
Sbjct: 630 VGKVDEDR 637
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 2/223 (0%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE-VKVAEELFKEAEEK 124
L SL ++G E+ K +DM SVY S I A+ V A +F + + +
Sbjct: 133 LIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSVFYQIKGR 192
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWA 183
+ ++LM +EG +EK E+ M N D ++ +++ F K Y +
Sbjct: 193 KCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDS 252
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+++++++ G P Y +++ Y ++ KA V EM+ KG V Y+ +
Sbjct: 253 AIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIK 312
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
GK GR+ DA R+ M GC+P+V + NSL+++ G+ L
Sbjct: 313 GLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRL 355
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 154/348 (44%), Gaps = 21/348 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
++S+ V+ S +I++ K K ++F + + RK P++T Y + L +
Sbjct: 154 VRSSTCVISSVYLSEIVKLLGKAKMVNKALSVFYQIKGRKC--KPAAT-TYNSMILMLKQ 210
Query: 73 SGRAFEILKFFRDMKEKG-ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
G ++ + + +M G D Y++LI +F + A LF E +E G+ +
Sbjct: 211 EGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAK 270
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
++ L+ +Y + VEK L+V++ MK+ ++ + G K A +V+ +
Sbjct: 271 IYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDM 330
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGR 250
I GC P V S+IN ++G K+F +M+ VV Y++++ A++
Sbjct: 331 IKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAP 390
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----KNLRQLEK------------YTT 294
+A KMK G P+ + Y+ L+D + K L LE+ Y +
Sbjct: 391 ASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCS 450
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+I++ + ++ + + E + N G + +M+ F K ++ E
Sbjct: 451 LINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSE 498
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+KM+ +G Y ++ + K G + L +S+ +D + Y +L L
Sbjct: 217 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD---ADVCTYNMLIHDL 273
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+S R + RDM+++ I + Y +LI F++ +V +A +L E G+ +
Sbjct: 274 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 333
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +I EG ++ L++ M+ L S+ V+++G K + A Y +
Sbjct: 334 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 393
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G G++TY +I+ C+ G +A + EM + G D +V YS+++ + K GR
Sbjct: 394 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 453
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ A +V ++ G PN IY++L+
Sbjct: 454 FKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 20/288 (6%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA--SLICSFASIAEVK 112
L S+ +Y IL + G + L+ FR M G +PSVY +++ S E
Sbjct: 118 LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGF--NPSVYTCNAILGSVVKSGEDV 175
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
KE ++ + D+ F L+ + EG EK+ +++ M+ + + ++
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+ + K+ + AA+++ + + S+G TY +I+ CR +K + +M+++
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK- 291
V Y++++ + G++ A +L+ +M G PN +N+L+D H N ++ K
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 292 ---------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
Y ++ EFD+ FY + NG + R
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 126/293 (43%), Gaps = 5/293 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M S G+ + + +++ G+ ++ +F E++ LTPS Y +L D L
Sbjct: 322 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK--GLTPSEVS-YGVLLDGL 378
Query: 71 GKSGRAFEILK-FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ F++ + F+ MK G+ Y +I + A L E + G+ D
Sbjct: 379 CKNAE-FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + G + E+V + L+ + I ++ + A+++YE
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I +G T+ ++ + C+ G ++AE+ M G V++ ++ YG +G
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
A + +M G P + Y SL+ + +LR+ EK+ + A A
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D L K+G E + +M + GI D Y++LI F + K A+E+
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 465
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ + ++ L+ G +++ + + E+M V+V K
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 525
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + + S G +P V++ +IN Y G KA VF EM + G Y S++
Sbjct: 526 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
K G +R+A + + + + +YN+L+ ++ NL
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 103/258 (39%), Gaps = 38/258 (14%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ +L SL K+G+ E +F R M GIL + + LI + + E A +F E
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G + L+ + G + + + ++S+ + + ++ K
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIG------LYSKAEKV-------------F 223
AV ++ +++ + +P TY S+I+ CR G L++K + F
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 224 I-----------------EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
+ +M G +V ++M+ Y + G+I L+ +M +
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750
Query: 267 EPNVWIYNSLMDMHGRAK 284
PN+ YN L +HG +K
Sbjct: 751 GPNLTTYNIL--LHGYSK 766
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 116/286 (40%), Gaps = 38/286 (13%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
I+ + K G+ V + E RK+ + IL + L G + + M+
Sbjct: 164 ILGSVVKSGEDVSVWSFLKEMLKRKI---CPDVATFNILINVLCAEGSFEKSSYLMQKME 220
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+ G Y +++ + K A EL + KG+ D+ + L+ +
Sbjct: 221 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 280
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
K ++ M+ ++ ++ ++NGFS A ++ +++S G P VT+ ++I
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
Query: 208 NAYCRIGLYSKAEKVFIEMQQKG--------------------FD-------------KC 234
+ + G + +A K+F M+ KG FD C
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400
Query: 235 V--VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V + Y+ M+ K G + +A+ L+ +M G +P++ Y++L++
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 120/294 (40%), Gaps = 3/294 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
++ +++ E+M + G D +++ + ++G EK L E ++ + P+ T Y
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ--NGGPNLT-TY 757
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL K +R + GIL D SL+ +++ ++ K
Sbjct: 758 NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 817
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ D F L+ G + ++V+ M + +++ +V+ ++ +
Sbjct: 818 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 877
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+ V ++ QG P Y +IN CR+G A V EM VA S+MV
Sbjct: 878 SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
K G+ +A L+ M P + + +LM + + N+ + + V+S
Sbjct: 938 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS 991
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 97/253 (38%), Gaps = 38/253 (15%)
Query: 51 RKLDLTPSS--THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
+ L P++ T MY L ++ KSG + + F +M ++ IL D Y SLI
Sbjct: 602 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Query: 109 AEVKVAEELFKEAEEKGML------------------------------------RDLEV 132
+ +A KEAE +G + D+
Sbjct: 662 GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 721
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
++ Y G +EKT +++ M N + ++++G+SKR+ + +Y +I
Sbjct: 722 TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 781
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G +P ++T S++ C + K+ +G + ++ +++ G I
Sbjct: 782 LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841
Query: 253 DAMRLVAKMKPKG 265
A LV M G
Sbjct: 842 WAFDLVKVMTSLG 854
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 129/278 (46%), Gaps = 10/278 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH+++K+ + G L+ Y ++ KIGD+ L + + R LT MY +
Sbjct: 148 LHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGR---LTKPDVVMYSTI 204
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+L K E F +M KGI D Y +LI F + ++K A L K +
Sbjct: 205 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTI 264
Query: 127 LRDLEVFLKLVLMYIEEGMVEK-------TLEVVESMKNAELNISDCISCVIVNGFSKRR 179
D+ + LV +EG V++ ++++ M++ +++G K
Sbjct: 265 NPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNG 324
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+ ++ ++ QG P T+ +++ + G A++VF ++ KG+ V Y+
Sbjct: 325 HLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYN 384
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
M+ + K G + +A+ +++KM+ GC PN + + +++
Sbjct: 385 VMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 422
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 2/223 (0%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP KIL DS K + + + ++ KGI D LI F + ++
Sbjct: 56 TPPIIQFNKIL-DSFAKM-KHYSTVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGF 113
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ + ++G L+ +G V+K L + + ++ ++NG
Sbjct: 114 SVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGV 173
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K AA+K+ +++ + P V Y++II+A C+ L S+A +F EM KG V
Sbjct: 174 CKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 233
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y++++ + G++++A+ L+ M K P+V+ Y L+D
Sbjct: 234 VTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVD 276
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 10/229 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M GI D Y ++ F +G ++ L L + Y IL D+
Sbjct: 221 FSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLL---NVMVLKTINPDVYTYTILVDA 277
Query: 70 LGKSGRAFE-------ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
L K G+ E + +M+++G D Y+SLI + A LF + +
Sbjct: 278 LCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK 337
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G+ ++ F L+ + G ++ EV + + +++ V++NG K+
Sbjct: 338 DQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 397
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A+ + ++ GCIP T+ +II A + KAEK+ +M +G
Sbjct: 398 EALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 446
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 147/348 (42%), Gaps = 19/348 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M S G+ D + +M+ F + G+ AL + E PSS +L
Sbjct: 235 EEMGSYGLSPDEKTFTTLMQGFIEEGNMN--GALRIR-EQMVAAGCPSSNVTVNVLVHGY 291
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR E+L F +M +G D + SL+ I VK A E+ ++G D+
Sbjct: 292 CKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDI 351
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + G VE+ +E++ M + + + +++ K A ++
Sbjct: 352 FTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARV 411
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L S+G +P T+ S+I C + A ++F EM+ KG Y+ ++ GR
Sbjct: 412 LTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGR 471
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
+ +A+ L+ +M+ GC NV YN+L+D + K + + E+ Y T
Sbjct: 472 LEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT 531
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+I R + + ++ M G D+ ++ F + I++
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKK 579
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 126/271 (46%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + M G D Y ++ K+G+ E+ + + R D +P+ T Y L
Sbjct: 336 LEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILR--DFSPN-TVTYNTL 392
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+L K + E + R + KGIL D + SLI ++A ELF+E + KG
Sbjct: 393 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGC 452
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ G +E+ L +++ M+++ + + +++GF K + A +
Sbjct: 453 HPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEE 512
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++ QG VTY ++I+ C+ +A ++ +M +G Y+S++ +
Sbjct: 513 IFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFC 572
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G I+ A +V M GCEP+ Y +L+
Sbjct: 573 RAGDIKKAADIVQTMTSNGCEPDSVTYGTLI 603
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 127/270 (47%), Gaps = 8/270 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGD-SEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++MK G + G + ++E++ K E VA + + E L L Y L +
Sbjct: 129 QEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKL---DAFTYNFLLNV 185
Query: 70 L--GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
L G + EI+ M +GI D + + LI + +++ A + +E G+
Sbjct: 186 LVDGNKLKLVEIVN--SRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLS 243
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D + F L+ +IEEG + L + E M A S+ V+V+G+ K +
Sbjct: 244 PDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSF 303
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++ ++G P + T+ S++N CRIG A ++ M Q+GFD + Y+S++ K
Sbjct: 304 IDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCK 363
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G + +A+ ++ +M + PN YN+L+
Sbjct: 364 LGEVEEAVEILNQMILRDFSPNTVTYNTLI 393
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
++ F +MK KG D Y LI S S ++ A L KE E G R++ + L+
Sbjct: 441 MELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDG 500
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ + +E+ E+ + M+ ++ + +++G K R A ++ +Q++ +G P
Sbjct: 501 FCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPD 560
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+ TY S++ +CR G KA + M G + V Y +++ K GR+ A RL+
Sbjct: 561 KFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLR 620
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAK 284
++ KG YN ++ R K
Sbjct: 621 TVQLKGMVLAPQTYNPVIKALFREK 645
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 3/261 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+ S GI+ D + +++ + LF E +++ Y +L DSL
Sbjct: 412 LTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCH---PDEFTYNMLIDSLCS 468
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR E L ++M+ G + Y +LI F ++ AEE+F E E +G+ R++
Sbjct: 469 RGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVT 528
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + VE+ ++++ M L ++ F + A + + +
Sbjct: 529 YNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMT 588
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S GC P VTY ++I + G A ++ +Q KG Y+ ++ + R
Sbjct: 589 SNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTS 648
Query: 253 DAMRLVAKMKPKGCEPNVWIY 273
+A+RL +M KG P+ Y
Sbjct: 649 EAVRLFREMMEKGDPPDAVTY 669
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 122/287 (42%), Gaps = 38/287 (13%)
Query: 27 QIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDM 86
Q+ +A + D + + L L+ S++ + PSS +Y+ + LGK G + + ++M
Sbjct: 74 QLRDALRRQSDEDSILDL-LDWASKQPNFVPSSV-IYEEVLRKLGKDGSFGSMRRVLQEM 131
Query: 87 KEKGILEDPSVYASLICSFA-------SIAEVKVAEELF--------------------- 118
K G + LI S+A ++A V + EE F
Sbjct: 132 KHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNK 191
Query: 119 --------KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
+G+ D+ F L+ + + ++E M + L+ +
Sbjct: 192 LKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTT 251
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ GF + A+++ EQ+++ GC VT +++ YC+ G + EM +G
Sbjct: 252 LMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEG 311
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
F ++S+V + G ++ A+ ++ M +G +P+++ YNSL+
Sbjct: 312 FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLI 358
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 4/270 (1%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
N + + +E+MK+ G D Y ++++ G E+ +L E ES +
Sbjct: 435 NNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCS---RNV 491
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y L D K+ R E + F +M+ +GI + Y +LI V+ A +L +
Sbjct: 492 VTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQ 551
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+G+ D + L+ + G ++K ++V++M + ++ G SK
Sbjct: 552 MLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGR 611
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A ++ + +G + TY +I A R S+A ++F EM +KG V Y
Sbjct: 612 VELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKV 671
Query: 241 MV-AMYGKTGRIRDAMRLVAKMKPKGCEPN 269
+ + G I +A+ + +M KG P+
Sbjct: 672 VFRGLCSGGGPIGEAVDFLVEMTDKGFLPD 701
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/335 (19%), Positives = 153/335 (45%), Gaps = 23/335 (6%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+++ + + GD +++A + + + R++ + P + Y IL D+ GK+G + + + DM+
Sbjct: 104 LLQGYGRAGDRQRLAQV--QRDMREVGVRPGMS-TYTILIDAWGKAGDLRRMWQAWEDMR 160
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK---GMLRDLEVFLKLVLMYIEEG 144
E+G+ + VY S+I + + +V E F E + G+ + + +V Y ++
Sbjct: 161 EQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQ 220
Query: 145 MVEKTLEVVESMK-NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
M++K +VE M+ + L + + +V +S+ A++ ++ + + G P +
Sbjct: 221 MMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAW 280
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+I++ G + + +M++ G Y++++ +GK I M M+
Sbjct: 281 TAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRR 340
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEKY----------------TTVISAYNMAREFDM 307
G +V YN+L+D + + EK+ +++ AY A +F+
Sbjct: 341 DGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEK 400
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++ + + G D + +++ + ++ + EE
Sbjct: 401 VLRLISRMKKEGRAPDNVVFNLLIDTYGRMGKPEE 435
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 140/327 (42%), Gaps = 20/327 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M+ G+ + Y ++ K+GD + F E + D + Y + S
Sbjct: 156 WEDMREQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHS 215
Query: 70 LGKSGRAFEILKFFRDMK-EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G+ ++ M+ + G+ D +++++ +++ V A E F G
Sbjct: 216 YGQQQMMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQP 275
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
L + ++ M G ++ L ++ MK + S + I+N F K R + + +
Sbjct: 276 SLHAWTAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTF 335
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ + G TY ++I+ + + G +AEK ++ M+++G + +S++ Y +
Sbjct: 336 KAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRA 395
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------- 291
+ +RL+++MK +G P+ ++N L+D +GR + EK
Sbjct: 396 DQFEKVLRLISRMKKEGRAPDNVVFNLLIDTYGRMGKPEEAEKVLCGAMKEYGIALETNN 455
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMN 318
+T+VI A+ D ++ + RMN
Sbjct: 456 FTSVIEAWARNGNLDKAEEWLH--RMN 480
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 117/240 (48%), Gaps = 10/240 (4%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P ++ +L G++G + + RDM+E G+ S Y LI ++ +++ +
Sbjct: 95 PVPLAVFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQ 154
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMV---EKTLEVVESMKNAELNISDCISCVIVN 173
+++ E+G+ ++ V+ ++ + G V E+T ++ + + +V+
Sbjct: 155 AWEDMREQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVH 214
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPG----QVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+ +++ + E++ + PG T+++++ A+ R G KA + F +
Sbjct: 215 SYGQQQMMDKMEALVERMRAD---PGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAAT 271
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G + A+++++ M G GR + +R + KMK G +P+ +YN++++ G+A+N+ +
Sbjct: 272 GGQPSLHAWTAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSM 331
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V++ G+ + +V + G PG TY +I+A+ + G + + + +M+++
Sbjct: 103 VLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDMREQ 162
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK---PKGCEPNVWIYNSLMDMHGRAKNL 286
G VV Y+S++A GK G + R A+M+ G EPN YN+++ +G+ + +
Sbjct: 163 GLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQMM 222
Query: 287 RQLE-----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGG 320
++E ++ V++A++ A D ++ ++ GG
Sbjct: 223 DKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGG 273
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 135/295 (45%), Gaps = 3/295 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++KM G + Y ++ K+G + AA+ L + + P +Y +
Sbjct: 158 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS--AAIRLLRSMEQGNCQPDVV-VYTSI 214
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K + + F +M +GI Y SLI + ++ E K L E +
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 274
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ ++ +F +V +EG V + +VV+ M + + +++G R AVK
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 334
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++ ++ +G P V+Y+++IN YC+I KA +F EM +K V YS+++
Sbjct: 335 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 394
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
GR++DA+ L +M +G P+ Y L+D + + L + I NM
Sbjct: 395 HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 449
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 6/227 (2%)
Query: 57 PSSTHMYKILCDS---LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
P + + IL +S L + G AF +L + + + + +C I EV
Sbjct: 100 PPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVL- 158
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
LF + +G ++ + L+ + G + ++ SM+ + I++
Sbjct: 159 --HLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIID 216
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
K R A ++ ++I QG P TY S+I+A C + + + EM
Sbjct: 217 SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP 276
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
VV +S++V K G++ +A +V M +G EPNV YN+LMD H
Sbjct: 277 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 323
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 104/217 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K R + + F +M K ++ + Y++L+ + ++ A LF E
Sbjct: 351 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 410
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G + D + L+ + +++ + ++++++ + ++ I ++++G +
Sbjct: 411 TRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELE 470
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AA ++ L S+G P TY +IN C+ GL ++A K+F EM++KG+ Y+ +
Sbjct: 471 AARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLIT 530
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ + ++L+ +M +G +V L++M
Sbjct: 531 RGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 567
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 3/240 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M G D Y ++ + KI EK LF E RK +L P++ Y L
Sbjct: 336 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEM-CRK-ELIPNTV-TYSTLMHG 392
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L GR + + F +M +G + D Y L+ + A L K E M D
Sbjct: 393 LCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPD 452
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++++ ++ G +E ++ ++ + L+ + +++NG ++ A K++
Sbjct: 453 IQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFG 512
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P TY I + R + ++ EM +GF V + +V M G
Sbjct: 513 EMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 572
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/225 (18%), Positives = 96/225 (42%), Gaps = 3/225 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ ++ +E+M ++ ++ Y +M +G + ALF E +R P Y
Sbjct: 365 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTR--GQIPDFVS-Y 421
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL D L K+ R E + + ++ + D +Y +I E++ A +LF
Sbjct: 422 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 481
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ ++ + ++ ++G++ + ++ MK + + C +I GF +
Sbjct: 482 KGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLR 541
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ ++++++G T ++ GL +++ E Q
Sbjct: 542 GIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 16/160 (10%)
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+K + Y + + Q+ S G P T +IN++C + A V ++ + G +
Sbjct: 79 TKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNI 138
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------MHGRAKNLRQ 288
+++++ G+I + + L KM +G +PNV Y +L++ + LR
Sbjct: 139 ATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRS 198
Query: 289 LEK---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
+E+ YT++I + R+ ++E G
Sbjct: 199 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQG 238
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 3/267 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M + G ++ Y ++ K +K L+ S TP + + L D
Sbjct: 848 YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCT---FGPLIDG 904
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR + + F M G + ++Y L+ + + V A E FK ++G+ D
Sbjct: 905 LLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPD 964
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+ + LV + G V+ L E +K A L+ +++NG + + A+ ++
Sbjct: 965 LKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFH 1024
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ ++G +P TY S+I +G+ +A K++ E+Q G V Y++++ Y +G
Sbjct: 1025 EMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSG 1084
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A + KM GC+PN + L
Sbjct: 1085 NSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 128/306 (41%), Gaps = 42/306 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KMKS+ D Y +++ F G +KV ++ E E+ D + IL ++
Sbjct: 322 FTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEA---DGYAPDVVTFTILVNA 378
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+GR E M+++G+L + Y +LI + A +LF E G+
Sbjct: 379 LCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPT 438
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCVIVNGFSKRRAYWAAVKV 187
++ L+ + + G K LE E MK + NI C + + ++ A +
Sbjct: 439 AYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLY--SLAEMGRLGEAKAM 496
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIG-------LYSKAEKV------------------ 222
+ +L S G P VTY ++ Y ++G L S+ KV
Sbjct: 497 FNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYK 556
Query: 223 ----------FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
F M++ VV Y+ ++A GK G+I+ A++L M GC PN
Sbjct: 557 AGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTIT 616
Query: 273 YNSLMD 278
+N+L+D
Sbjct: 617 FNTLLD 622
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 120/264 (45%), Gaps = 3/264 (1%)
Query: 14 KSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
K G+ Y +++ F ++ + E LF E +S T Y L D+ GKS
Sbjct: 782 KELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAG---CAPDTFTYNSLIDAHGKS 838
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+ E+ + +M +G + Y +I + + A +L+ F
Sbjct: 839 GKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTF 898
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ ++ G ++ E+ + M + + I ++VNG+ K A + +++++
Sbjct: 899 GPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVK 958
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G P +Y +++ C G A F +++Q G D +VAY+ M+ G++ R +
Sbjct: 959 EGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEE 1018
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLM 277
A+ L +M+ +G P+++ YNSL+
Sbjct: 1019 ALSLFHEMQNRGIVPDLYTYNSLI 1042
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 108/228 (47%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ + Y L L +SG E L+ +R M +G+ +++L+ + +K L
Sbjct: 193 NAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLL 252
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E E G+ ++ + + + +G +++ +++ M + V+++
Sbjct: 253 EEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTA 312
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
R A+ ++ ++ S P +VTY ++++ + G K EK++ EM+ G+ VV +
Sbjct: 313 RKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTF 372
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ +V K GRI +A L+ M+ +G PN+ YN+L+ RA L
Sbjct: 373 TILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRL 420
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 151/350 (43%), Gaps = 23/350 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
EKM+ AG VL++ Y ++ + G ++ ++ S L S + L +
Sbjct: 183 EKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLK---PSLKTFSALMVAS 239
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLIC--SFASIAEVKVAEELFKEAEEKGMLR 128
GK ++ +M+ G+ P++Y IC ++ A + K ++ G
Sbjct: 240 GKRRNIKTVMGLLEEMESMGL--RPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGP 297
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ ++ + + MK++ +++ FS K++
Sbjct: 298 DVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIW 357
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ + G P VT+ ++NA C+ G ++A + M+++G + Y+++++ +
Sbjct: 358 TEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRA 417
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----KNLRQLEKY------TTVI-- 296
R+ DA+ L + M+ G EP + Y L+D HG++ K L EK ++
Sbjct: 418 NRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVAC 477
Query: 297 --SAYNMAR--EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
S Y++A +NE + +G D +M+ +SK+ Q++E
Sbjct: 478 NASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDE 527
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 124/273 (45%), Gaps = 5/273 (1%)
Query: 50 SRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA 109
+++L + P+ +Y +L D + F +MK G D Y SLI +
Sbjct: 781 TKELGVKPT-LKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSG 839
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
++ +L+ E +G + + ++ ++ ++K +++ ++ + + + + C
Sbjct: 840 KINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFG 899
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++G K A ++++ ++ GC P Y ++N Y ++G A + F M ++
Sbjct: 900 PLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKE 959
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G + +Y+ +V + GR+ DA+ K+K G +P++ YN +++ GR++ R
Sbjct: 960 GIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQ--RTE 1017
Query: 290 EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVI 322
E + N D+ YN +N G++
Sbjct: 1018 EALSLFHEMQNRGIVPDLYT--YNSLILNLGIV 1048
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 124/287 (43%), Gaps = 38/287 (13%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M+ G++ + Y ++ + + LF ES L + P++ + Y +L D
Sbjct: 393 DTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMES--LGVEPTA-YTYILLIDYH 449
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GKSG + L+ F MK +GI + + + S A + + A+ +F E + G+ D
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDS 509
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNA------------------------------- 159
+ ++ Y + G V++ ++++ M
Sbjct: 510 VTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCR 569
Query: 160 --ELNISDCISC--VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
E+N++ + +++ G K AV+++E + GC P +T+ ++++ C+
Sbjct: 570 MEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDE 629
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
A K+F +M V+ +++++ + K +I++A+ L +MK
Sbjct: 630 VDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK 676
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 7/201 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
++ M G +S Y ++ + K+G + F + E + DL Y IL
Sbjct: 918 FDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKS-----YTILV 972
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D L +GR + L +F +K+ G+ D Y +I + A LF E + +G++
Sbjct: 973 DILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIV 1032
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
DL + L+L GM+E+ ++ E ++ L + ++ G++ A +
Sbjct: 1033 PDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGI 1092
Query: 188 YEQLISQGCIPGQVTYASIIN 208
Y++++ GC P T+A + N
Sbjct: 1093 YKKMMVGGCDPNTGTFAQLPN 1113
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 6/250 (2%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE-DPSVYASLICSFASIAEVKVA 114
T + HM +IL + R E + F D+ ++ I+ + Y + S ++ A
Sbjct: 124 TETCNHMLEIL-----RVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQA 178
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
++ E G + + + L+ ++ G ++ LEV M + L S ++
Sbjct: 179 PSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVA 238
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
KRR + + E++ S G P TY I R G +A ++ M G
Sbjct: 239 SGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPD 298
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTT 294
VV Y+ ++ ++ DAM L KMK +P+ Y +L+D +L ++EK T
Sbjct: 299 VVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWT 358
Query: 295 VISAYNMARE 304
+ A A +
Sbjct: 359 EMEADGYAPD 368
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LHY+EK+K AG+ D Y ++ + +E+ +LF E ++R + P + Y L
Sbjct: 985 LHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRG--IVP-DLYTYNSL 1041
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+LG G E K + +++ G+ + Y +LI + ++A ++K+
Sbjct: 1042 ILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKK 1095
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 136/293 (46%), Gaps = 17/293 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS---STHMY 63
L +++M G+ D CY +++ F+K GD + ++ +L PS + Y
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW-----ERLLKGPSVYPNIPSY 258
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ + L K G+ E + + MK+ +D Y++LI + A ++KE E
Sbjct: 259 NVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 318
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV----IVNGFSKRR 179
G+ D+ V+ ++ Y+ G +E+ LE+ + M+ C + V ++ G +
Sbjct: 319 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK-----EGCRTVVSYNILIRGLFENA 373
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+ ++E L + C +TY +++ C+ G +KA + E + D AYS
Sbjct: 374 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYS 433
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
SM+ + GR+ + ++ +M GC+PN + N++++ RA L ++
Sbjct: 434 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRF 486
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 133/325 (40%), Gaps = 39/325 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M G+ D Y ++ + + G E+ L+ E S Y IL
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS----YNILIRG 368
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++ + E + + + EK D Y L+ + A + +EAE D
Sbjct: 369 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 428
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ EG +++ V++ M + + ++NGF + A++ +
Sbjct: 429 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFG 488
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM-------- 241
++S+GC P VTY ++IN + +S+A + EM KG+ ++ YS +
Sbjct: 489 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGK 548
Query: 242 -------------------------VAMYG--KTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ ++G +G++ DA++L ++MK + C PN+ +N
Sbjct: 549 KLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHN 608
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAY 299
+LM+ + ++ + K I Y
Sbjct: 609 TLMEGFYKVRDFERASKIWDHILQY 633
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 11/285 (3%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ A + ++ + FL E+ + L+P+ Y IL + + + +
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFET--MGLSPN-LQTYNILIKISCRKKQFDKAKELLN 173
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M E+G D Y +LI S A + A +LF E E+G+ D+ + L+ + ++G
Sbjct: 174 WMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 233
Query: 145 MVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
+ E+ E + + S V++NG K + + +++ ++ TY
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 293
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+++I+ C G A +V+ EM + G VV Y++M+ Y + GRI + + L M+
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
+GC V YN L+ + L + K IS + + E D C
Sbjct: 354 EGCR-TVVSYNILI------RGLFENAKVDEAISIWELLPEKDCC 391
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSKRRAYWAAV 185
+V L ++ Y + M ++ L++ + M I C + ++N + + A
Sbjct: 79 DVALTVIKAYAKNSMPDQALDIFQRMHE----IFGCQPGIRSYNSLLNALIESNKWDEAE 134
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ + G P TY +I CR + KA+++ M ++GF V +Y +++
Sbjct: 135 SFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSL 194
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G + DA++L +M +G P+V YN L+D
Sbjct: 195 AKNGYMSDALKLFDEMPERGVTPDVACYNILID 227
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+++ + A ++ + QG P +Y ++IN+ + G S A K+F EM ++G V
Sbjct: 161 RKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKM-KPKGCEPNVWIYNSLMD--------------MHG 281
Y+ ++ + K G I +A + ++ K PN+ YN +++ H
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280
Query: 282 RAKNLR--QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
KN R L Y+T+I + D + Y E NG D + M+ + + +
Sbjct: 281 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340
Query: 340 IEE 342
IEE
Sbjct: 341 IEE 343
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/258 (17%), Positives = 106/258 (41%), Gaps = 3/258 (1%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEI 79
LD+ Y ++ + G ++VA + + P H+ + + ++ + +
Sbjct: 427 LDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP---HVCNAVINGFVRASKLEDA 483
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
L+FF +M KG Y +LI + A L KE KG ++ + L+
Sbjct: 484 LRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG 543
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ ++ L + + +I++G A+++Y ++ + C+P
Sbjct: 544 LCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPN 603
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VT+ +++ + ++ + +A K++ + Q G +++Y+ + RI DA+ +
Sbjct: 604 LVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLN 663
Query: 260 KMKPKGCEPNVWIYNSLM 277
+G P +N L+
Sbjct: 664 DAVDRGVLPTAITWNILV 681
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 16/273 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L K+GR+ E K F M ++G+ D + Y +L+ +A+ + L
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMV 363
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D VF L+ Y ++ V++ + V M+ LN + ++ K +
Sbjct: 364 RNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD 423
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ +EQ+I +G P + Y S+I++ C + KAE++ +EM +G + ++S++
Sbjct: 424 DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSII 483
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------- 291
+ K GR+ ++ +L M G +PNV Y++L+D + A + + K
Sbjct: 484 HSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMK 543
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y T+I+ Y D + + E +G
Sbjct: 544 PDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 121/271 (44%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH + G D Y ++ F+K GDS+K + + E R++ +P Y +
Sbjct: 181 LHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRI--SPDVV-TYSSI 237
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+L K + ++ M + G++ + Y S++ + S + K A K+ G+
Sbjct: 238 IAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGV 297
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ + G + ++ +SM L C ++ G++ + A
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHA 357
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + ++ G P + +I AY + +A VF +M+Q G + VV Y +++ +
Sbjct: 358 LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K+G + DAM +M +G PN+ +Y SL+
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 7/274 (2%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKV-AALFLECESRKLDLTPSSTHMYKILCDSLG 71
M GI D + ++ A+ K EKV A+ + + R+ L P+ Y + L
Sbjct: 362 MVRNGIHPDHHVFNILICAYAK---QEKVDEAMLVFSKMRQHGLNPNVV-TYGAVIGILC 417
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
KSG + + +F M ++G+ + VY SLI S + AEEL E ++G+ +
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F ++ + +EG V ++ ++ + M + + +++G+ A K+ +
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S G P VTY ++IN YCR+ A +F EM G ++ Y+ ++ T R
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
A L + G + + YN + +HG KN
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNII--LHGLCKN 629
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 126/287 (43%), Gaps = 24/287 (8%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S T + K LCD +S A E+L D + G D Y ++I F + A
Sbjct: 160 SCTILLKGLCDE-NRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCIS-CVIVNGF 175
+ E ++ + D+ + ++ + ++K +EV+ +M KN + +C++ I++G+
Sbjct: 219 YHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVM--PNCMTYNSILHGY 276
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
A+ +++ S G P VTY S+++ C+ G ++A K+F M ++G + +
Sbjct: 277 CSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
Y +++ Y G + + L+ M G P+ ++N L
Sbjct: 337 ATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNIL------------------- 377
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
I AY + D + +++ R +G + G ++G+ K +++
Sbjct: 378 ICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDD 424
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 8/242 (3%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TP+ H Y IL ++GR ++ +KG + + L+ + A
Sbjct: 83 VTPT-VHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141
Query: 115 EEL-FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS--DCIS-CV 170
++ + E + D+ L+ +E ++ LE++ M + S D +S
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT 201
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++NGF K A Y +++ + P VTY+SII A C+ KA +V M + G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLR 287
+ Y+S++ Y + + ++A+ + KM+ G EP+V YNSLMD +GR+ R
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321
Query: 288 QL 289
++
Sbjct: 322 KI 323
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 110/269 (40%), Gaps = 4/269 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y+E+M G+ + Y ++ + +K L LE R + L +T + +
Sbjct: 428 YFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL---NTIFFNSIIH 484
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
S K GR E K F M G+ + Y++LI + ++ A +L GM
Sbjct: 485 SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP 544
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ Y ++ L + + M ++ ++ + +I+ G R AA ++Y
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 604
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ G TY I++ C+ L +A ++F + ++ M+ K
Sbjct: 605 VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 664
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR +A L A + G P+V Y SLM
Sbjct: 665 GRNDEAKDLFAALSANGLVPDVRTY-SLM 692
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 13/271 (4%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+M GI L++ + I+ + K G +SEK+ L + ++ + P+ Y L D
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMV-----RIGVKPNVI-TYSTLID 519
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+G+ E K M G+ D Y +LI + ++ + A LFKE G+
Sbjct: 520 GYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSP 579
Query: 129 DLEVFLKLV--LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + ++ L + K L V + +L +S +I++G K A++
Sbjct: 580 NIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELS--TYNIILHGLCKNNLTDEALR 637
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ L T+ +I A ++G +A+ +F + G V YS M
Sbjct: 638 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 697
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G + + L M+ GC N + NS++
Sbjct: 698 EQGLLEELDDLFLSMEENGCTANSRMLNSIV 728
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 119/276 (43%), Gaps = 1/276 (0%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ G V D + ++ A K G E AL L E R+ + P Y L + +
Sbjct: 275 MRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDII-TYNTLISACSR 333
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
E + F DM+ D Y ++I + A + AEELFKE E KG D
Sbjct: 334 ESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVT 393
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + EG EK ++ E M + I++ + K+ + A+++Y +
Sbjct: 394 YNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMK 453
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G P VTY +I++ + +A V EM G + YS+++ Y K G+
Sbjct: 454 SSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKRE 513
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+A M+ G +P+ Y+ ++D R +++
Sbjct: 514 EAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKK 549
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 145/318 (45%), Gaps = 18/318 (5%)
Query: 43 ALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI 102
AL +E +R + +Y + ++GR ++ + M+E+G + D + +LI
Sbjct: 232 ALAVEIFARAESSVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLI 291
Query: 103 CSF--ASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
+ + E +A +L E G+ D+ + L+ E +E+ + V M++
Sbjct: 292 NARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHR 351
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
+++ + + A +++++L S+G P VTY S++ A+ R G K
Sbjct: 352 CQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVR 411
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ EM ++GF + + Y++++ MYGK GR AM++ MK G P+ Y L+D
Sbjct: 412 DICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSL 471
Query: 281 GRAKNLRQ----------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
G+A + + L Y+ +I AY A + + + +N R +G DR
Sbjct: 472 GKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDR 531
Query: 325 AMAGIMVGVFSKLSQIEE 342
+M+ F + +++++
Sbjct: 532 LAYSVMLDFFLRFNEMKK 549
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 128/271 (47%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++ +GI D Y ++ A + + E+ A+F + ES + Y +
Sbjct: 306 LQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQ---PDLWTYNAM 362
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
G+ RA + + F++++ KG D Y SL+ +F+ + ++ +E ++G
Sbjct: 363 ISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGF 422
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+D + ++ MY ++G ++ +++ MK++ N V+++ K A
Sbjct: 423 GQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAAN 482
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V +++ G P TY+++I AY + G +AE+ F M++ G +AYS M+ +
Sbjct: 483 VMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFL 542
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ ++ AM L +M +G P+ +Y +M
Sbjct: 543 RFNEMKKAMGLYHEMIREGFTPDNGLYEVMM 573
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 135/289 (46%), Gaps = 4/289 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++++ G+ + +EAF + G+ +V ++ K + H+Y+I+ L
Sbjct: 868 QELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIY---NGMKAAGYFPTMHVYRIMLRLL 924
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K R ++ +M+E G D + S++ + I + K ++++ ++ + D
Sbjct: 925 CKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDE 984
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
E + L++MY + E+ ++ M++ L ++ F+K+R Y A +++E+
Sbjct: 985 ETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEE 1044
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L S G + Y ++ Y G + KAE + M++ G + + ++ YGK+G+
Sbjct: 1045 LRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQ 1104
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKYTTVISA 298
+A ++ ++ G + Y+S++D + + + + +EK T + A
Sbjct: 1105 PEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEA 1153
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++++S G D+ Y ++ AF + G++EKV + E R Y +
Sbjct: 379 FKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFG---QDEMTYNTIIHM 435
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK GR + ++ +RDMK G D Y LI S ++V+ A + E + G+
Sbjct: 436 YGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPT 495
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + L+ Y + G E+ E M+ + + V+++ F + A+ +Y
Sbjct: 496 LHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYH 555
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ-KGFDKCVVA 237
++I +G P Y +++A R ++ +++ +M++ G + V++
Sbjct: 556 EMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELSGMNPQVIS 604
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 109/257 (42%), Gaps = 16/257 (6%)
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D V+ +LI ++A + A +F G ++ L+ I + + + V+
Sbjct: 808 DRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVI 867
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ +++ L IS + + F++ + K+Y + + G P Y ++ C+
Sbjct: 868 QELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKC 927
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
E + EM++ GF + +S++ +Y + + K++ +P+ Y
Sbjct: 928 KRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETY 987
Query: 274 NSLMDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDMCVKFYNEFRM 317
N+L+ M+ R + + L+ Y ++I+A+N R ++ + + E R
Sbjct: 988 NTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRS 1047
Query: 318 NGGVIDRAMAGIMVGVF 334
NG +DRA +M+ +
Sbjct: 1048 NGYKLDRAFYHLMMKTY 1064
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+++S G LD Y +M+ + GD K L + ++ T S+ H+ + S
Sbjct: 1042 FEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMV---S 1098
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GKSG+ E ++++ G++ D Y+S+I ++ + K E E +E G+ D
Sbjct: 1099 YGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPD 1158
Query: 130 LEVF 133
++
Sbjct: 1159 HRIW 1162
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 88/221 (39%), Gaps = 3/221 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ AG D I++ + I D + + ++ + + L Y L
Sbjct: 939 EMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLK---PDEETYNTLIIMYC 995
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ R E M+ G+ Y SLI +F + AEELF+E G D
Sbjct: 996 RDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRA 1055
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ ++ Y G K ++ MK + + + +++ + K A V + L
Sbjct: 1056 FYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNL 1115
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+ G + + Y+S+I+AY + G + + EM++ G +
Sbjct: 1116 RTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIE 1156
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 9/190 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST-HMYKI 65
+ Y MKS+G D+ Y ++++ K E+ A + S LD T H Y
Sbjct: 446 MQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVM----SEMLDAGVKPTLHTYSA 501
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + K+G+ E + F M+ GI D Y+ ++ F E+K A L+ E +G
Sbjct: 502 LICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREG 561
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
D ++ ++ + E M + ++ M+ IS V+V G Y A
Sbjct: 562 FTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELSGMNPQVISSVLVKG----GCYDHAA 617
Query: 186 KVYEQLISQG 195
K+ + IS G
Sbjct: 618 KMLKVAISNG 627
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 131/279 (46%), Gaps = 3/279 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S + M + G + Y +++ F K E+ + E ++ +L + Y
Sbjct: 398 SAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFEL---NIMGYN 454
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+L +L K+G+ + L +M +KG D + +LI + + A L+++
Sbjct: 455 VLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLD 514
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G++ + + L+ ++ G +++ L++V M + + ++ F K A A
Sbjct: 515 GVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKA 574
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++++++ + +P ++ +IN CR+G A ++ +M +G VV Y+S++
Sbjct: 575 LGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLING 634
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
K G IR+A L K++ +G +P+ YN+L+ H RA
Sbjct: 635 LCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRA 673
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 9/262 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCD 68
+M + G L+ Y ++ A K G K + E + K D+ +T ++
Sbjct: 439 NEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIF----- 493
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K R + L +RDM G++ + Y +LI +F ++ A +L + +G
Sbjct: 494 GLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPL 553
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKV 187
D + L+ + + G EK L + + M +L S+ ISC +++NG + A+++
Sbjct: 554 DEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSN-ISCNLLINGLCRVGKVCNALEL 612
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+I +G P VTY S+IN C++G +A +F ++Q +G + Y++++ + +
Sbjct: 613 LRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCR 672
Query: 248 TGRIRDAMRLVAKMKPKGCEPN 269
G DA L+ + PN
Sbjct: 673 AGMFDDAYLLLLRGVENAFIPN 694
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 155/384 (40%), Gaps = 56/384 (14%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+YE M S G++ + +M+A + + + +L + K P+S +Y+ L
Sbjct: 196 FYE-MLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRD--MTKHGCVPNSV-VYQTLIH 251
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI---CSFASIAE-VKVAEELF------ 118
+L K R E LK +M G L D + +I C I E K+ + +
Sbjct: 252 ALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTP 311
Query: 119 ----------------KEAEEKGMLRDLEV-----FLKLVLMYIEEGMV-EKTLEVVESM 156
K E + +L + F L+ Y++ G + E + + M
Sbjct: 312 NDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKM 371
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+++G K+ +AV + + + GC P +TY ++++ +C+
Sbjct: 372 IKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQL 431
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+A V EM KGF+ ++ Y+ ++ K G++ A+ ++ +M KGC+P+++ +N+L
Sbjct: 432 EEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTL 491
Query: 277 MDMHGRAKNLRQLE------------------KYTTVISAYNMAREFDMCVKFYNEFRMN 318
+ G K R+ + Y T+I A+ +K N+
Sbjct: 492 --IFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFR 549
Query: 319 GGVIDRAMAGIMVGVFSKLSQIEE 342
G +D ++ F KL E+
Sbjct: 550 GCPLDEITYNGLIKAFCKLGATEK 573
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D K + E +M KG + Y L+ + +V A ++ E
Sbjct: 418 YTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMS 477
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+KG D+ F L+ + E L + M + + +++ F + A
Sbjct: 478 DKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQ 537
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+K+ ++ +GC ++TY +I A+C++G KA +F EM +K ++ + ++
Sbjct: 538 EALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLI 597
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ G++ +A+ L+ M +G P+V YNSL++ + N+R+
Sbjct: 598 NGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIRE 643
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 5/175 (2%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q L M G LD Y +++AF K+G +EK LF E + DL PS+
Sbjct: 537 QEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRK--DLVPSNISC- 593
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+L + L + G+ L+ RDM +G+ D Y SLI + ++ A LF + +
Sbjct: 594 NLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQA 653
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKT-LEVVESMKNAELNISDCISCVIVNGFSK 177
+G+ D + L+ + GM + L ++ ++NA + +D ++V+ F K
Sbjct: 654 EGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIP-NDVTWYILVSNFIK 707
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 88/202 (43%), Gaps = 23/202 (11%)
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+KG VY LI + E KV ++L + +E+G+ +F+ ++ Y +
Sbjct: 95 QKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPG 154
Query: 148 KTLEVVESMK------------NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
+ ++ MK N L+I +C V A V+ +++S+G
Sbjct: 155 QATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSV-----------AANVFYEMLSKG 203
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
IP T+ ++ A C + A + +M + G V Y +++ K R+ +A+
Sbjct: 204 VIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEAL 263
Query: 256 RLVAKMKPKGCEPNVWIYNSLM 277
+L+ +M GC P+V +N ++
Sbjct: 264 KLLEEMFLMGCLPDVDTFNDVI 285
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 100/253 (39%), Gaps = 10/253 (3%)
Query: 21 DSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
D GC + ++ K+ E AL+ LD ++T Y L + + G
Sbjct: 478 DKGCKPDIFTFNTLIFGLCKVDRKEDALALY---RDMLLDGVIANTVTYNTLIHAFLRGG 534
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
E LK DM +G D Y LI +F + + A LF E K ++
Sbjct: 535 AIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCN 594
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ G V LE++ M + L ++NG K A ++ +L ++
Sbjct: 595 LLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAE 654
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK-TGRIRD 253
G P +TY ++I +CR G++ A + + + F V + +V+ + K G+
Sbjct: 655 GIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENG 714
Query: 254 AMRLVAKMKPKGC 266
AK+ P C
Sbjct: 715 ISFGTAKVIPSIC 727
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 54/214 (25%)
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA-----ELNISDCI 167
VA +F E KG++ + F G+V K L +V + NA ++ C+
Sbjct: 191 VAANVFYEMLSKGVIPTVYTF----------GVVMKALCMVNEVDNACSLLRDMTKHGCV 240
Query: 168 SCVIV-----NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
+V + SKR A+K+ E++ GC+P T+ +I CR+ + K+
Sbjct: 241 PNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKL 300
Query: 223 FIEMQQKGFDKCVVAY-------------------------------SSMVAMYGKTGRI 251
M +GF + Y + ++ Y K+GR+
Sbjct: 301 VDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRL 360
Query: 252 RDAMR-LVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+A L KM GC P+V+ +N+L +HG K
Sbjct: 361 DEANAFLYDKMIKNGCRPDVFTFNTL--IHGLCK 392
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 159/347 (45%), Gaps = 29/347 (8%)
Query: 13 MKSAGIVLDSGCYCQIMEAFY---KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
M+ G+V Y ++E + +IG++EKV + E R +++ ++Y +
Sbjct: 243 MEREGVVASLVTYTILIEWYASSERIGEAEKV---YEEMCERNVEM---DVYVYTSMISW 296
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++G F +M +GI+ + + +LI +++ AE L +E + KG+ +
Sbjct: 297 NCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLN 356
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ +F ++ Y + GM+++ + + M+ ++ +G K Y A +V
Sbjct: 357 VVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLN 416
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P VT A+ I YC+ G ++ E+ ++++G +V Y++++ Y K
Sbjct: 417 VMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNE 476
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR-----------------AKNLR-QLEK 291
+++ A L A+M KG P+V+ Y SL +HG K +R ++
Sbjct: 477 KVKQAHXLKAEMVEKGLLPDVFTYTSL--IHGECIVDKVDEALKLFNEMLVKGIRGNVKT 534
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
YT +IS + D +K Y+E G + D + +VG K S
Sbjct: 535 YTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVGSLHKPS 581
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M GIV ++ + ++ K G E L E + + +DL + ++ + D
Sbjct: 310 FDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDL---NVVIFNTMMDG 366
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G E + M+ KG D Y L + + A+ + EKG+ +
Sbjct: 367 YCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPN 426
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + +Y +EG + + + +++ + + +++ +SK A +
Sbjct: 427 VVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKA 486
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ +G +P TY S+I+ C + +A K+F EM KG V Y+++++ K G
Sbjct: 487 EMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEG 546
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R +A++L +M G P+ ++ +L+
Sbjct: 547 RADEALKLYDEMMRMGLIPDDRVFEALV 574
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 7/203 (3%)
Query: 80 LKFFRDMKEKGILE----DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
++FFR M E G ++ ++ ++C EV A+EL E +G++ + +
Sbjct: 166 VRFFRRMVESGRVDIGVQSLTIVVDVLCRRG---EVGRAKELMNEMAARGVVPTVFTYNT 222
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
L+ + E E++ M+ + S +++ ++ A KVYE++ +
Sbjct: 223 LLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERN 282
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
Y S+I+ CR G +A +F EM +G + ++++ K G++ A
Sbjct: 283 VEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAE 342
Query: 256 RLVAKMKPKGCEPNVWIYNSLMD 278
L+ +M+ KG + NV I+N++MD
Sbjct: 343 ILLEEMQCKGVDLNVVIFNTMMD 365
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%)
Query: 6 KLHYYEKMKSA-------GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS 58
KLH YE+ K G+ + +E + + G+ + E R + P+
Sbjct: 404 KLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKR--GVVPN 461
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
Y L D+ K+ + + +M EKG+L D Y SLI + +V A +LF
Sbjct: 462 IV-TYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLF 520
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E KG+ +++ + ++ +EG ++ L++ + M L D + +V K
Sbjct: 521 NEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVGSLHKP 580
Query: 179 RAYWA 183
++ A
Sbjct: 581 SSHAA 585
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 124/272 (45%), Gaps = 6/272 (2%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D Y ++ + G+ ++V E +R LD Y +L D L K+G+ E
Sbjct: 338 DIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLD---PDVVTYSLLLDYLCKNGKCTEAR 394
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
K F M KGI + ++Y L+ +A+ + +L G+ + +F ++ Y
Sbjct: 395 KIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAY 454
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
++ M+++ + + M L+ ++++ K AV + Q+I+ G P
Sbjct: 455 AKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNS 514
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
V + S++ C + + KAE++F EM +G VV +++++ G++ A RL+
Sbjct: 515 VVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDS 574
Query: 261 MKPKGCEPNVWIYNSLMDMH---GRAKNLRQL 289
M+ G PNV YN+L+ H GR QL
Sbjct: 575 MERVGVRPNVISYNTLIGGHCLAGRTDEAAQL 606
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 126/305 (41%), Gaps = 21/305 (6%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP+ Y + D L K+ + M +KG+ D Y+++I V AE
Sbjct: 196 TPNVV-TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAE 254
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ + +KG+ D+ + ++ + V++ V++ M + + I++G
Sbjct: 255 GVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGL 314
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K +A A V + +I + P TY +I+ Y G + + + EM +G D V
Sbjct: 315 CKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDV 374
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-----KNLRQLE 290
V YS ++ K G+ +A ++ M KG +PNV IY L +HG A +L L
Sbjct: 375 VTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGIL--LHGYAARGAIADLTDLL 432
Query: 291 K-------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
+ V+ AY D + ++ +G D GI++ KL
Sbjct: 433 DLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKL 492
Query: 338 SQIEE 342
++++
Sbjct: 493 GRVDD 497
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 131/307 (42%), Gaps = 40/307 (13%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+H + +M G+ D Y +++A K+G + F + + + TP+S ++ L
Sbjct: 464 MHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV--TPNSV-VFNSL 520
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L R + + F +M ++G+ + + +++C+ + +V VA+ L E G+
Sbjct: 521 VYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGV 580
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAV 185
++ + L+ + G ++ ++++ M + L D IS ++ G+ K A
Sbjct: 581 RPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLK-PDLISYDTLLRGYCKTGRIDNAY 639
Query: 186 KVYEQLISQGCIPGQVTYAS-----------------------------------IINAY 210
++ +++ +G PG VTY++ I+N
Sbjct: 640 CLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGL 699
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
C+ +A K+F + K ++ ++ M+ + K GR +DAM L A + G PNV
Sbjct: 700 CKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNV 759
Query: 271 WIYNSLM 277
Y +M
Sbjct: 760 VTYCIMM 766
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 91/215 (42%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D L K+ + M +K + D Y LI + S E K +E
Sbjct: 307 YNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMY 366
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G+ D+ + L+ + G + ++ M + + I ++++G++ R A
Sbjct: 367 ARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIA 426
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ + +++ G P + ++ AY + + +A +F M Q G VV Y ++
Sbjct: 427 DLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILI 486
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K GR+ DA+ +M G PN ++NSL+
Sbjct: 487 DALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLV 521
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSKRRAYWAAVKVYEQLISQGC 196
E VE+ LE++ +M AE +C V I++G K +A A V + +I +G
Sbjct: 173 NEKRVEEALELLHTM--AEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV 230
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
VTY++II+ C+ +AE V M KG VV Y++++ K + A
Sbjct: 231 KLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEG 290
Query: 257 LVAKMKPKGCEPNVWIYNSLMD 278
++ M KG +P+V YN+++D
Sbjct: 291 VLQHMIDKGVKPDVVTYNTIID 312
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 8/219 (3%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
LCD+ + A +IL R M E G + + +L+ + V+ A EL E G
Sbjct: 135 LCDA-KRVDEAMDIL--LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDG 191
Query: 126 ---MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++ + ++ + V++ V++ M + + + I++G K +A
Sbjct: 192 GGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVD 251
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A V + +I +G P VTY +II+ C+ +AE V M KG VV Y++++
Sbjct: 252 RAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTII 311
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
K + A ++ M K +P++ YN L +HG
Sbjct: 312 DGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCL--IHG 348
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 74/168 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L K+GR FR+M KG+ Y++++ A+EL+
Sbjct: 622 YDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMI 681
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G D+ + ++ + V++ ++ +S+ + +L + ++++ K
Sbjct: 682 KSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKK 741
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
A+ ++ + S G +P VTY ++ + GL + + +F+ M++ G
Sbjct: 742 DAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG 789
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H +L +SL K + K ++ M G+ + VY LI + +V+ A+ L E
Sbjct: 166 HACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSE 225
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
E K + DL + L+ +Y ++GM + L V + M+ + +++GF K
Sbjct: 226 MESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGR 285
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A+++++++ + P VTY ++I+ YCR+ +A ++ EM+ +G VV Y+S
Sbjct: 286 MREAMRLFKEI--RDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNS 343
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
++ + GRIRDA +L+ +M K EP+ N+L++ + + +++
Sbjct: 344 ILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMK 390
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 131/332 (39%), Gaps = 24/332 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+KM G+ + Y ++ A K GD EK L E ES+ Y L
Sbjct: 188 YKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESK---CVFPDLFTYNTLISL 244
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G +E L M+ +GI D Y SLI F ++ A LFKE + +
Sbjct: 245 YCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT--PN 302
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y +++ L + E M+ L + I+ + A K+
Sbjct: 303 HVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLN 362
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + P VT ++INAYC+IG A KV M + G Y +++ + K
Sbjct: 363 EMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIR 422
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
+ A L+ M G P+ Y+ L+D + +N + +
Sbjct: 423 EMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQN-------------------EEAVL 463
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
K +EF G +D+++ ++ F K Q++
Sbjct: 464 KLPDEFVRKGLCVDKSLYRALIRRFCKREQVD 495
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 119/252 (47%), Gaps = 3/252 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ + ++ D ++ L E E++ L T + Y + L + GR + K
Sbjct: 306 YTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVT---YNSILRKLCEIGRIRDANKLLN 362
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M EK I D +LI ++ I ++K A ++ E G+ D + L+ + +
Sbjct: 363 EMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIR 422
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ E++ SM +A + S C +V+G+ ++ A +K+ ++ + +G + Y
Sbjct: 423 EMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYR 482
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++I +C+ A+K+F MQ+KG V Y+S+ Y K G+ A L+ +M +
Sbjct: 483 ALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKR 542
Query: 265 GCEPNVWIYNSL 276
+ IY +L
Sbjct: 543 RLMITLKIYRAL 554
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 45/255 (17%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
SL S IL F+ +K L + Y + + + V L + ++ +
Sbjct: 77 SLQSSWTMIHILTKFKHLKTAQSLLEKIAYRDFLSTQS------VLSALVRLHDDPDI-- 128
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR---AYW--- 182
+ VF LV++Y M ++ ++V E M V++N +K R W
Sbjct: 129 NSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVY 188
Query: 183 ---------AAVKVYEQLISQGCIPGQV--------------------TYASIINAYCRI 213
A + VY LI C G V TY ++I+ YC+
Sbjct: 189 KKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKK 248
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G++ +A V M+++G +V Y+S++ + K GR+R+AMRL ++ + PN Y
Sbjct: 249 GMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVTY 306
Query: 274 NSLMDMHGRAKNLRQ 288
+L+D + R +L Q
Sbjct: 307 TTLIDGYCRLNDLDQ 321
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 96/241 (39%), Gaps = 3/241 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M++ G+ Y I+ +IG L E +K++ P + L ++
Sbjct: 327 EEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIE--PDNV-TCNTLINAY 383
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G LK M E G+ D Y +LI F I E+ A+EL + G
Sbjct: 384 CKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSY 443
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ LV Y + E L++ + L + + ++ F KR A K++
Sbjct: 444 CTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSL 503
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G + V Y S+ AY ++G + A + EM ++ + Y ++ A Y
Sbjct: 504 MQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRALNASYAGDNS 563
Query: 251 I 251
I
Sbjct: 564 I 564
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 122/259 (47%), Gaps = 1/259 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y + +LG++ + I K +M G + Y LI S+ + A +F +
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G D + L+ ++ + G ++ +++ + M+ L+ VI+N K
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AA K++ +++ QGC P VTY +++ + + Y A K++ +MQ GF+ V YS
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
++ + G G + +A + +M+ K P+ +Y L+D+ G+A N+ + ++ +
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 301 MAREFDMCVKFYNEF-RMN 318
+ C + F R+N
Sbjct: 605 LRPNVPTCNSLLSTFLRVN 623
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ V+ Q+ GC P +VTY ++I+ + + G A ++ MQ G YS ++
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
GK G + A +L +M +GC PN+ YN +MD+H +A+N + K
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ V+ + + E + + D + G++V ++ K +E+
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ + +M+ AG D YC +++ K G + ++ ++ L T Y ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS---PDTFTYSVI 475
Query: 67 CDSLGKSG----------------------------------RAFE-ILKFFRDMKEKGI 91
+ LGK+G R ++ LK +RDM+ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D Y+ ++ ++ AE +F E ++K + D V+ LV ++ + G VEK +
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 152 VVESMKNAEL--NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
++M +A L N+ C S +++ F + A ++ + +++ G P TY +++
Sbjct: 596 WYQAMLHAGLRPNVPTCNS--LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q+ L Y M++AG D Y +ME G E+ A+F E + + + P
Sbjct: 519 NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK--NWIPDEP- 575
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D GK+G + ++++ M G+ + SL+ +F + ++ A EL +
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 122 EEKGMLRDLEVFLKLV 137
G+ L+ + L+
Sbjct: 636 LALGLRPSLQTYTLLL 651
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 8/242 (3%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L DSL K+G E + M +G + + Y+ LI + + A EL +E
Sbjct: 119 YNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMT 178
Query: 123 EKG--MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS-DCIS-CVIVNGFSKR 178
K +L ++ + + ++ M + E++ S+++ L +S D ++ +++G K
Sbjct: 179 RKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC 238
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A + +I+ G +P VTY +++N C+ +A + M KG V+ Y
Sbjct: 239 GQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 296
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
S +V + K R+ +A+ L+ M +GC PNV +NS++D G K+ R E + +
Sbjct: 297 SVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID--GLCKSDRSGEAFQIALQV 354
Query: 299 YN 300
YN
Sbjct: 355 YN 356
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 3/298 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M G+ D Y +++AF K ++ L SR TP+ I+ D L
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC--TPNVVTFNSII-DGL 338
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
KS R+ E + + + ++ D + LI + A LF+E K M D+
Sbjct: 339 CKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDV 398
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ + G VE ++++ M N + + V+V+G K + E+
Sbjct: 399 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEE 458
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++S GC+P +TY S++ A CR A ++ +++ G+D V Y+ +V K+G+
Sbjct: 459 MVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGK 518
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
A+ ++ +M KG +P+ + + + R+ NL + V+ A M + C
Sbjct: 519 TEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTC 576
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
I+NG K A ++++E+L+ +G P VTY ++I++ C+ G +A ++ M +
Sbjct: 86 TIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSR 145
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE--PNVWIYNSLMD 278
G VV YS ++ K GRI +A L+ +M K C+ PN+ YNS +D
Sbjct: 146 GCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 196
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 114/271 (42%), Gaps = 5/271 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M S G V + Y ++ K+G ++ L E + D+ P+ Y D
Sbjct: 139 HGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII-TYNSFLDG 197
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGML 127
L K E + R +++ + P +++LI + E + G +
Sbjct: 198 LCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTD--EACNDDMIAGGYV 255
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ + LV + +E+ ++ESM + + V+V+ F K A+++
Sbjct: 256 PNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 315
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ S+GC P VT+ SII+ C+ +A ++ +++ + V ++ ++A K
Sbjct: 316 LHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACK 375
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G A L +M K +P+V + +L+D
Sbjct: 376 AGNFEQASALFEEMVAKNMQPDVMTFGALID 406
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ G P VTY +IIN C+ ++F E+ ++G VV Y++++ K G
Sbjct: 71 EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAG 130
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
+ +A RL M +GC PNV Y+ L++ GR R+L
Sbjct: 131 DLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEAREL 173
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 203 YASIINAYCRIGLYSKAEKVFI-EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
Y ++ + CR G ++A ++F EM + G +V Y++++ K+ + M L ++
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+G P+V YN+L+D +A +L + +
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARR 137
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 122/259 (47%), Gaps = 1/259 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y + +LG++ + I K +M G + Y LI S+ + A +F +
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G D + L+ ++ + G ++ +++ + M+ L+ VI+N K
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AA K++ +++ QGC P VTY +++ + + Y A K++ +MQ GF+ V YS
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
++ + G G + +A + +M+ K P+ +Y L+D+ G+A N+ + ++ +
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 301 MAREFDMCVKFYNEF-RMN 318
+ C + F R+N
Sbjct: 605 LRPNVPTCNSLLSTFLRVN 623
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ V+ Q+ GC P +VTY ++I+ + + G A ++ MQ G YS ++
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
GK G + A +L +M +GC PN+ YN +MD+H +A+N + K
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ V+ + + E + + D + G++V ++ K +E+
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ + +M+ AG D YC +++ K G + ++ ++ L T Y ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS---PDTFTYSVI 475
Query: 67 CDSLGKSG----------------------------------RAFE-ILKFFRDMKEKGI 91
+ LGK+G R ++ LK +RDM+ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D Y+ ++ ++ AE +F E ++K + D V+ LV ++ + G VEK +
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 152 VVESMKNAEL--NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
++M +A L N+ C S +++ F + A ++ + +++ G P TY +++
Sbjct: 596 WYQAMLHAGLRPNVPTCNS--LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q+ L Y M++AG D Y +ME G E+ A+F E + + + P
Sbjct: 519 NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK--NWIPDEP- 575
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D GK+G + ++++ M G+ + SL+ +F + ++ A EL +
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 122 EEKGMLRDLEVFLKLV 137
G+ L+ + L+
Sbjct: 636 LALGLRPSLQTYTLLL 651
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 143/292 (48%), Gaps = 6/292 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+MKS G+ L Y ++ F KI DS+ LF E +++ L+ + +Y + +
Sbjct: 323 EEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTK---LSSLNGIIYSNIIHAH 379
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+SG + R+M+E GI VY S++ + I +F+ +E G +
Sbjct: 380 CQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSI 439
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +Y++ G V K L + + M++ + ++ +++NGF + A ++E+
Sbjct: 440 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEE 499
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G P + Y +I A+C++G +A + +MQ++ A+ ++ Y G
Sbjct: 500 MLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD 559
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
++ A+ + M+ GC P V YN+L +HG + ++++ +V+ ++A
Sbjct: 560 MKSALDTLDLMRRSGCVPTVMTYNAL--IHGLVRK-HKVQRAVSVLDKMSIA 608
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 151/369 (40%), Gaps = 41/369 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK----------------- 52
+E+M +G+ D Y ++EAF K+G+ ++ + + + +
Sbjct: 497 FEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAV 556
Query: 53 ----------LDLTPSS-----THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
LDL S Y L L + + + M GI +
Sbjct: 557 AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHT 616
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y ++ +A+ ++ A E F + +E G+ D+ ++ L+ + G ++ L V M
Sbjct: 617 YTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 676
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
++ + I ++++G+++R W A + +Q+ G P TY S INA C+ G
Sbjct: 677 FQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQ 736
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+AEKV EM G V Y++++ + + A++ +MK G +P+ Y+ L+
Sbjct: 737 RAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLV 796
Query: 278 DMHGRAKNLRQLEKYTTVISAYNMAREFDMCV---------KFYNEFRMNGGVIDRAMAG 328
+ + YT +IS E D+ V ++ ++ GG + A+
Sbjct: 797 TSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHWSRWLHKIERTGGALTEALQR 856
Query: 329 IMVGVFSKL 337
I ++ L
Sbjct: 857 IFPPDWNSL 865
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 131/309 (42%), Gaps = 32/309 (10%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECE----SRKLDLT 56
+SQS + +++ K+ L+ Y I+ A + G+ E+ L E E +D+
Sbjct: 348 NDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVY 407
Query: 57 PSSTHMYKILCD---------------------SLG-------KSGRAFEILKFFRDMKE 88
S H Y I+ + S G K G+ + L ++M+
Sbjct: 408 HSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMES 467
Query: 89 KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
GI + Y+ LI F + + A +F+E G+ D ++ L+ + + G +++
Sbjct: 468 CGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDR 527
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+ ++E M+ + S+ I+ G++ +A+ + + GC+P +TY ++I+
Sbjct: 528 AICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIH 587
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
R +A V +M G Y+ ++ Y +G I A K+K G +
Sbjct: 588 GLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKL 647
Query: 269 NVWIYNSLM 277
+V+IY +L+
Sbjct: 648 DVYIYETLL 656
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 11/259 (4%)
Query: 32 FYKIGDSEKVAALFLECESRKLDLT----PSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+ K GD A F +R ++ S H Y + D G L +MK
Sbjct: 274 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGA-------LSCVEEMK 326
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+G+ Y+ LI FA I + + A+ LFKEA+ K + ++ ++ + + G +E
Sbjct: 327 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 386
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ E+V M+ ++ + +++G++ + + V+E+L G P ++Y ++
Sbjct: 387 RAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL 446
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N Y +IG +KA + EM+ G YS ++ + +A + +M G +
Sbjct: 447 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQ 506
Query: 268 PNVWIYNSLMDMHGRAKNL 286
P+ IYN L++ + N+
Sbjct: 507 PDRAIYNLLIEAFCKMGNM 525
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 139/331 (41%), Gaps = 19/331 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+S GI ++ Y ++ F + D A+F E + L P +Y +L ++
Sbjct: 463 KEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM--LRSGLQPDRA-IYNLLIEAF 519
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G + M+++ + + +I +A ++K A + G + +
Sbjct: 520 CKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTV 579
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + + V++ + V++ M A + ++ +I+ G++ A + + +
Sbjct: 580 MTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK 639
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G Y +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 640 IKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGD 699
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
+ +A L+ +MK G PN+ Y S ++ +A ++++ EK YTT
Sbjct: 700 VWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTT 759
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
+I + D +K + E ++ G D A
Sbjct: 760 LIKGWARVSLPDRALKCFEEMKLAGLKPDEA 790
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 121/260 (46%), Gaps = 16/260 (6%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ +I +A + A F+ +G+ + VF LV Y + L VE MK
Sbjct: 267 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 326
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ L ++ ++++GF+K +A ++++ ++ + Y++II+A+C+ G
Sbjct: 327 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 386
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+AE++ EM++ G D + Y SM+ Y + + ++K G +P++ Y L+
Sbjct: 387 RAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL 446
Query: 278 DMHGR----AKNL---RQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
+++ + AK L +++E Y+ +I+ + +F + E +G
Sbjct: 447 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQ 506
Query: 322 IDRAMAGIMVGVFSKLSQIE 341
DRA+ +++ F K+ ++
Sbjct: 507 PDRAIYNLLIEAFCKMGNMD 526
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 38/240 (15%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + +KM AGI + Y IM + GD K F + + L L ++Y
Sbjct: 596 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKL---DVYIY 652
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ L + KSGR L R+M + I + +Y LI +A +V AE+L K+ +E
Sbjct: 653 ETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKE 712
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ ++ + + + G M+ AE
Sbjct: 713 DGVPPNIHTYTSYINACCKAG----------DMQRAE----------------------- 739
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
KV E+++ G P TY ++I + R+ L +A K F EM+ G +Y +V
Sbjct: 740 --KVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVT 797
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 132/278 (47%), Gaps = 16/278 (5%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+T+ Y L SL ++ R E FR M +G + Y+ LI +V A EL
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E + G ++ + L+ + G +++ +++ M + V+++GFSK
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A +++E+++ +GCIP TY S+++ + R G + + + +F +M ++G +
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLE 290
+++++ + K G + +A RL +M+ GC P+V YN+L+ H + LR++
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMI 289
Query: 291 K---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ Y +I Y+ + D +K + E +G
Sbjct: 290 RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 38/259 (14%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ K+G ++ LF R P +Y +L D K G E + F
Sbjct: 125 YGSLLSGLCKMGKLKEAVDLFSRMVYRG---CPPDGVVYNVLIDGFSKKGDMGEAYRLFE 181
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M EKG + Y SL+ F+ E + LFK+ +G + ++ F L+
Sbjct: 182 EMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL------- 234
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+GF K A +++ ++ S GC P V+Y
Sbjct: 235 ----------------------------DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYN 266
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++I C G +A+++ EM + G +V+Y+ ++ Y K+G + A++L ++
Sbjct: 267 TLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS 326
Query: 265 GCEPNVWIYNSLMDMHGRA 283
G EP+ + Y++++D RA
Sbjct: 327 GLEPDAFSYSTIIDCLCRA 345
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%)
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
Y +++ GC+P TY ++ + C+ + +A VF M +G V +YS ++A
Sbjct: 39 TYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLC 98
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ ++ +A L+ +M G +PNV Y SL+
Sbjct: 99 RGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 87/222 (39%), Gaps = 3/222 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M G V + + +++ F K+GD + LFLE S P Y L
Sbjct: 215 FKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG---CPPDVVSYNTLIRG 271
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G+ E + R+M G+ D Y LI ++ + A +LF E + G+ D
Sbjct: 272 MCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPD 331
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ G V V + M + +V G + + ++++
Sbjct: 332 AFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQ 391
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ C+P Y ++ C+ ++F E+ ++GF
Sbjct: 392 AMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGF 433
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 135/289 (46%), Gaps = 9/289 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS---STHMY 63
L +++M G+ D CY +++ F+K GD + ++ +L PS + Y
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW-----ERLLKGPSVYPNIPSY 258
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ + L K G+ E + + MK+ +D Y++LI + A ++KE E
Sbjct: 259 NVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 318
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D+ V+ ++ Y+ G +E+ LE+ + M+ + +++ G +
Sbjct: 319 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYN-ILIRGLFENAKVDE 377
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ ++E L + C +TY +++ C+ G +KA + E + D AYSSM+
Sbjct: 378 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 437
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+ GR+ + ++ +M GC+PN + N++++ RA L ++
Sbjct: 438 GLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRF 486
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 131/317 (41%), Gaps = 39/317 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M G+ D Y ++ + + G E+ L+ E S Y IL
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS----YNILIRG 368
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++ + E + + + EK D Y L+ + A + +EAE D
Sbjct: 369 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 428
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ EG +++ V++ M + + ++NGF + A++ +
Sbjct: 429 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFG 488
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM-------- 241
++S+GC P VTY ++IN + +S+A + EM KG+ ++ YS +
Sbjct: 489 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGK 548
Query: 242 -------------------------VAMYG--KTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ ++G +G++ DA++L ++MK + C PN+ +N
Sbjct: 549 KLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHN 608
Query: 275 SLMDMHGRAKNLRQLEK 291
+LM+ + ++ + K
Sbjct: 609 TLMEGFYKVRDFERASK 625
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 11/285 (3%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ A + ++ + FL E+ + L+P+ Y IL + + + +
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFET--MGLSPN-LQTYNILIKISCRKKQFDKAKELLN 173
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M E+G D Y +LI S A + A +LF E E+G+ D+ + L+ + ++G
Sbjct: 174 WMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 233
Query: 145 MVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
+ E+ E + + S V++NG K + + +++ ++ TY
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 293
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+++I+ C G A +V+ EM + G VV Y++M+ Y + GRI + + L M+
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
+GC V YN L+ + L + K IS + + E D C
Sbjct: 354 EGCR-TVVSYNILI------RGLFENAKVDEAISIWELLPEKDCC 391
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSKRRAYWAAV 185
+V L ++ Y + M ++ L++ + M I C + ++N + + A
Sbjct: 79 DVALTVIKAYAKNSMPDQALDIFQRMHE----IFGCQPGIRSYNSLLNALIESNKWDEAE 134
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ + G P TY +I CR + KA+++ M ++GF V +Y +++
Sbjct: 135 SFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSL 194
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G + DA++L +M +G P+V YN L+D
Sbjct: 195 AKNGYMSDALKLFDEMPERGVTPDVACYNILID 227
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+++ + A ++ + QG P +Y ++IN+ + G S A K+F EM ++G V
Sbjct: 161 RKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKM-KPKGCEPNVWIYNSLMD--------------MHG 281
Y+ ++ + K G I +A + ++ K PN+ YN +++ H
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280
Query: 282 RAKNLR--QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
KN R L Y+T+I + D + Y E NG D + M+ + + +
Sbjct: 281 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340
Query: 340 IEE 342
IEE
Sbjct: 341 IEE 343
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/209 (17%), Positives = 86/209 (41%), Gaps = 3/209 (1%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEI 79
LD+ Y ++ + G ++VA + + P H+ + + ++ + +
Sbjct: 427 LDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP---HVCNAVINGFVRASKLEDA 483
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
L+FF +M KG Y +LI + A L KE KG ++ + L+
Sbjct: 484 LRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG 543
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ ++ L + + +I++G A+++Y ++ + C+P
Sbjct: 544 LCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPN 603
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
VT+ +++ + ++ + +A K++ + Q
Sbjct: 604 LVTHNTLMEGFYKVRDFERASKIWDHILQ 632
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ D L K GR E + F++MK G++ D Y SLI F + K A+ LF E
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 545
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G+ D+ F L+ M +EG V + E++E M
Sbjct: 546 DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVM-------------------------- 579
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
I +GCIP VTY +++ C S+A ++F++MQ+ G VV Y +++
Sbjct: 580 ---------IQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLM 630
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCE------PNVWIYNSLMD---MHGRAKNLRQLEK-- 291
+TG I+ A+ L KM + P+V Y+ ++D HGR R+L K
Sbjct: 631 KGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM 690
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
YT++I + + + + +NE G ++ +M+ F K QI
Sbjct: 691 KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 750
Query: 341 EE 342
++
Sbjct: 751 DK 752
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 139/297 (46%), Gaps = 28/297 (9%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILC 67
+++MK+ GI+ D Y ++ F G EK LF E + D+T SS +L
Sbjct: 325 FKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSS-----VLI 379
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D L K G+ E K + ++G + D +L+ + A +LF + ++ G +
Sbjct: 380 DMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCM 439
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC----ISC--------VIVNGF 175
++ L+ + G ++ LE+ ++M +SD I+C +I++G
Sbjct: 440 PNVVTCATLMKGLCQSGNIKIALELHKNM------LSDTSPYGINCKPNAISYSIIIDGL 493
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A ++++++ + G IP ++Y S+I+ +CR G + A+ +F EM G V
Sbjct: 494 CKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDV 553
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
+S ++ M K G++ +A L+ M +GC PN Y +L+ M+ R QL
Sbjct: 554 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQL 610
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 120/252 (47%), Gaps = 9/252 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++MK+ G++ D Y ++ F + G + LF E + + P T + +L D
Sbjct: 506 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNE--MVDIGVQPDVT-TFSVLIDM 562
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ E + M ++G + + Y +L+ + A +LF + ++ G L D
Sbjct: 563 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 622
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI-----SDCIS-CVIVNGFSKRRAYWA 183
+ + L+ + G ++ LE+ + M + D IS +I++G K
Sbjct: 623 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 682
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++++++ + G IP ++Y S+I+ +CR G A+ +F EM +G V YS M+
Sbjct: 683 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIH 742
Query: 244 MYGKTGRIRDAM 255
+ K G+I A+
Sbjct: 743 GFCKEGQIDKAL 754
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 155/362 (42%), Gaps = 35/362 (9%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST---HMYKILC 67
E M G +LD Y +++ + LF+ +KL P + + K LC
Sbjct: 34 EVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMS--MKKLGCRPDAIAYGTLMKGLC 91
Query: 68 DSLGKSGRAFEILK-FFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
+ GK A + + D + GI P++ Y+ +I A ELFKE + +
Sbjct: 92 QT-GKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQ 150
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
GM+ D+ + L+ + G EK + M + + S ++++ K A
Sbjct: 151 GMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEA 210
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ E +I +GCI VTY+++I C S+A ++F+ MQ+ G +AY +++
Sbjct: 211 NELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKG 270
Query: 245 YGKTGRIRDAMRLVAKMKPKG------CEPNVWIYNSLMDMHGRAKNLRQLE-------- 290
+TG I A++L +M C+P + Y+ ++D G K+ R+ E
Sbjct: 271 LCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIID--GLCKDRREDEARELFKEM 328
Query: 291 ----------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
YTT+I + ++ +++ +NE G D + +++ + K ++
Sbjct: 329 KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKV 388
Query: 341 EE 342
E
Sbjct: 389 IE 390
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 153/360 (42%), Gaps = 31/360 (8%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M G +LD Y +++ + LF+ +KL P + Y L L
Sbjct: 215 EVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMS--MQKLGCRPDAI-AYGTLMKGL 271
Query: 71 GKSGRAFEILKFFRDMKEK----GILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
++G L+ ++M GI P++ Y+ +I A ELFKE + +
Sbjct: 272 CQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ 331
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G++ D+ + L+ + G EK + M + + S V+++ K+ A
Sbjct: 332 GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEA 391
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
K+ E +I +GCIP VT +++ C SKA ++F++MQ+ G VV ++++
Sbjct: 392 NKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKG 451
Query: 245 YGKTGRIRDAMRLVAKM----KPKG--CEPNVWIYNSLMD---MHGRAKNLRQLEK---- 291
++G I+ A+ L M P G C+PN Y+ ++D GR R+L K
Sbjct: 452 LCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKA 511
Query: 292 ---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT++I + + ++ +NE G D +++ + K ++ E
Sbjct: 512 LGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIE 571
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 26/199 (13%)
Query: 168 SCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
S V+++ F K A ++ E ++ +GCI VTY+++I C S+A ++F+ M+
Sbjct: 13 SGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMK 72
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG------CEPNVWIYNSLMDMHG 281
+ G +AY +++ +TG+I A+ L +M C+P + Y+ ++D G
Sbjct: 73 KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIID--G 130
Query: 282 RAKNLRQLE------------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
K+ R+ E YT++I + + +++ +NE G D
Sbjct: 131 LCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSD 190
Query: 324 RAMAGIMVGVFSKLSQIEE 342
+ +++ + K ++ E
Sbjct: 191 VTTSSMLIDILCKEGKVIE 209
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G P T +I+ +C+ G +A ++ M Q+G +V YS+++ R
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM 277
I +A +L MK GC P+ Y +LM
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLM 87
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ D L K GR E + F++MK G++ D Y SLI F + K A+ LF E
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 701
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G+ D+ F L+ M +EG V + E++E M
Sbjct: 702 DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVM-------------------------- 735
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
I +GCIP VTY +++ C S+A ++F++MQ+ G VV Y +++
Sbjct: 736 ---------IQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLM 786
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCE------PNVWIYNSLMD---MHGRAKNLRQLEK-- 291
+TG I+ A+ L KM + P+V Y+ ++D HGR R+L K
Sbjct: 787 KGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM 846
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
YT++I + + + + +NE G ++ +M+ F K QI
Sbjct: 847 KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 906
Query: 341 EE 342
++
Sbjct: 907 DK 908
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 139/297 (46%), Gaps = 28/297 (9%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILC 67
+E+MK+ GI+ D Y ++ F G EK LF E + D+T SS +L
Sbjct: 481 FEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSS-----VLI 535
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D L K G+ E K + ++G + D +L+ + A +LF + ++ G +
Sbjct: 536 DMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCM 595
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC----ISC--------VIVNGF 175
++ L+ + G ++ LE+ ++M +SD I+C +I++G
Sbjct: 596 PNVVTCATLMKGLCQSGNIKIALELHKNM------LSDTSPYGINCKPNAISYSIIIDGL 649
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A ++++++ + G IP ++Y S+I+ +CR G + A+ +F EM G V
Sbjct: 650 CKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDV 709
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
+S ++ M K G++ +A L+ M +GC PN Y +L+ M+ R QL
Sbjct: 710 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQL 766
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 120/252 (47%), Gaps = 9/252 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++MK+ G++ D Y ++ F + G + LF E + + P T + +L D
Sbjct: 662 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNE--MVDIGVQPDVT-TFSVLIDM 718
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ E + M ++G + + Y +L+ + A +LF + ++ G L D
Sbjct: 719 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 778
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI-----SDCIS-CVIVNGFSKRRAYWA 183
+ + L+ + G ++ LE+ + M + D IS +I++G K
Sbjct: 779 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 838
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++++++ + G IP ++Y S+I+ +CR G A+ +F EM +G V YS M+
Sbjct: 839 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIH 898
Query: 244 MYGKTGRIRDAM 255
+ K G+I A+
Sbjct: 899 GFCKEGQIDKAL 910
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 111/236 (47%), Gaps = 15/236 (6%)
Query: 50 SRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA 109
S + D+T SS +L D L K G+ E + M ++G + D Y++LI
Sbjct: 49 SIRPDVTTSS-----MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEH 103
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
+ A LF ++ G D + L+ + G + L++ + M N I C
Sbjct: 104 RISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG--IKC 161
Query: 170 --------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
+I++G K R A ++++++ +QG +P ++Y S+I+ +C G + KA+
Sbjct: 162 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKC 221
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+F EM G V ++ M+ K G++ +A L+ M +GC ++ Y++L+
Sbjct: 222 LFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLI 277
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 156/365 (42%), Gaps = 38/365 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++MK+ G++ D Y ++ F G EK LF E + + P T +L D
Sbjct: 188 FKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNE--MLDVGIQPDVT-TSGVLIDM 244
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G+ E + M +G + D Y++LI + A +LF ++ G D
Sbjct: 245 FCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPD 304
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKN--AELNISDCI------SCVIVNGFSKRRAY 181
+ L+ + G + L + + M N ++ I CI S ++++ K
Sbjct: 305 AIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIK-CIRPDVTTSSMLIDILCKEGKV 363
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++ E +I +GCI VTY+++I C S+A +F+ MQ+ G + Y ++
Sbjct: 364 IEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTL 423
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKG------CEPNVWIYNSLMDMHGRAKNLRQLE----- 290
+ +TG I A++L +M C+P + Y+ ++D G K+ R+ E
Sbjct: 424 MKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID--GLCKDRREDEARELF 481
Query: 291 -------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
YTT+I + ++ +++ +NE G D + +++ + K
Sbjct: 482 EEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKK 541
Query: 338 SQIEE 342
++ E
Sbjct: 542 GKVIE 546
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 9/257 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M G +LD Y +++ + LF+ +KL P + Y L L
Sbjct: 78 EVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMS--MQKLGCRPDAI-TYGTLMKGL 134
Query: 71 GKSGRAFEILKFFRDMKEK----GILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
++G L+ ++M GI P++ Y+ +I A ELFKE + +
Sbjct: 135 CQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ 194
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
GM+ D+ + L+ + G EK + M + + S V+++ F K A
Sbjct: 195 GMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEA 254
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ E ++ +GCI VTY+++I C S+A ++F+ M++ G +AY +++
Sbjct: 255 NELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKG 314
Query: 245 YGKTGRIRDAMRLVAKM 261
+TG+I A+ L +M
Sbjct: 315 LCQTGKINIALHLHQEM 331
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 152/360 (42%), Gaps = 31/360 (8%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M G +LD Y +++ + LF+ +KL P + Y L L
Sbjct: 371 EVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMS--MQKLGCRPDAI-TYGTLMKGL 427
Query: 71 GKSGRAFEILKFFRDMKEK----GILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
++G L+ ++M GI P++ Y+ +I A ELF+E + +
Sbjct: 428 CQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQ 487
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G++ D+ + L+ + G EK + M + + S V+++ K+ A
Sbjct: 488 GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEA 547
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
K+ E +I +GCI VT +++ C SKA ++F++MQ+ G VV ++++
Sbjct: 548 NKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKG 607
Query: 245 YGKTGRIRDAMRLVAKM----KPKG--CEPNVWIYNSLMD---MHGRAKNLRQLEK---- 291
++G I+ A+ L M P G C+PN Y+ ++D GR R+L K
Sbjct: 608 LCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKA 667
Query: 292 ---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT++I + + ++ +NE G D +++ + K ++ E
Sbjct: 668 LGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIE 727
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 135/303 (44%), Gaps = 38/303 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+EKM++ GI S Y ++ A+ D E+ + + + +++ S Y IL
Sbjct: 334 FEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEM---SLVTYSILVSG 390
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+G A +F++ KEK + +Y ++I ++ + AE L +E EE+G+
Sbjct: 391 FAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAP 450
Query: 130 LEVFLK-----------------------------------LVLMYIEEGMVEKTLEVVE 154
++++ L+ +Y + G V K LEV +
Sbjct: 451 IDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSK 510
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M++A + + +++NGF K + + A ++E LI G P V Y +II A+C +G
Sbjct: 511 EMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMG 570
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A EMQ++ + ++ + + G ++ A+ + M+ GC P V YN
Sbjct: 571 KMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYN 630
Query: 275 SLM 277
+L+
Sbjct: 631 ALI 633
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 115/253 (45%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ I+ F + G+ +K +F + ++ + H Y L L + + + +
Sbjct: 594 FMPIIHGFARKGEMKKALDVF---DMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILD 650
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M G+ + Y +++ +AS+ + A F + ++G+ D+ + L+ + G
Sbjct: 651 EMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSG 710
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ L V + M + + I ++++G+++R W A + +Q+ +G P TY
Sbjct: 711 RMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYT 770
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S INA + G +A K EM+ G V Y++++ + + A+ +MK
Sbjct: 771 SFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLS 830
Query: 265 GCEPNVWIYNSLM 277
G +P+ +Y+ LM
Sbjct: 831 GLKPDRAVYHCLM 843
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 149/338 (44%), Gaps = 23/338 (6%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++M+ AGI + Y ++ F K+ D A+F + K + P I+
Sbjct: 506 LEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDL--IKDGIKPDVVLYNNII 563
Query: 67 CD--SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+GK RA +K + + K + +I FA E+K A ++F
Sbjct: 564 TAFCGMGKMDRAVCTVKEMQKQRHKPTTR---TFMPIIHGFARKGEMKKALDVFDMMRMS 620
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G + + + L+L +E+ +EK ++++ M A ++ ++ I++G++ A
Sbjct: 621 GCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKA 680
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ +L +G TY +++ A C+ G A V EM + + Y+ ++
Sbjct: 681 FTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDG 740
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------- 291
+ + G I +A L+ +MK +G +P++ Y S ++ +A ++++ K
Sbjct: 741 WARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPN 800
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
YTT+I+ + A + + + E +++G DRA+
Sbjct: 801 VKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAV 838
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 118/253 (46%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ + + GD + F + +R ++ PSS H+Y L + E L R
Sbjct: 314 YGLMVNYYTRRGDMHRARETFEKMRARGIE--PSS-HVYTNLIHAYAVGRDMEEALSCVR 370
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
MKE+GI Y+ L+ FA + A+ F+EA+EK + ++ ++ Y +
Sbjct: 371 KMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRC 430
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++K +V M+ ++ I +++G++ + V+E+ G P +TY
Sbjct: 431 NMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYG 490
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+IN Y ++G SKA +V EM+ G + YS ++ + K +A + +
Sbjct: 491 CLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKD 550
Query: 265 GCEPNVWIYNSLM 277
G +P+V +YN+++
Sbjct: 551 GIKPDVVLYNNII 563
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 90/199 (45%), Gaps = 3/199 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M AG+ + Y IM + +GD+ K F + L L + Y+ L +
Sbjct: 650 DEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQL---DVYTYEALLKAC 706
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
KSGR L ++M + I + +Y LI +A ++ A +L ++ + +G+ D+
Sbjct: 707 CKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDI 766
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ + + G +++ + +E MK+ + + ++NG+++ A+ +E+
Sbjct: 767 HTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEE 826
Query: 191 LISQGCIPGQVTYASIINA 209
+ G P + Y ++ +
Sbjct: 827 MKLSGLKPDRAVYHCLMTS 845
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 130/275 (47%), Gaps = 10/275 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH---MY 63
L ++M +G+ D CY ++ +K G+ EKV ++ KL P + Y
Sbjct: 213 LDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVW-----DKLVKDPGARPNLATY 267
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ D L K GR E+ + + M + D Y LI +V A ++ E +
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G++ D ++ LV + + G V++ + +S A L + +++ G
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYN-IMIKGLFDSGMVDE 386
Query: 184 AVKVYEQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+++++ L CIP VT+ ++I+ C+ G +KA +F E + G V +YSSM+
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ DA+++ KM GC+PN IYN+L+
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALI 481
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 27/283 (9%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAF---------YKIGDSEKVAALFLECESRKLDLTPSST 60
Y ++ G+V+D+ Y +++ F +K DS A L R L
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL------RNL------- 368
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGI--LEDPSVYASLICSFASIAEVKVAEELF 118
Y I+ L SG E ++ + D+ EK + + D + +LI A +F
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF 427
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+EA G D+ + ++ G + ++V E M + I +++GF +
Sbjct: 428 EEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQV 487
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
AV++Y ++ GC P +TY ++I+ C+ Y +A V EM + GF + Y
Sbjct: 488 YRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTY 547
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
S++ +I DA+ + ++ KG + +V ++N L +HG
Sbjct: 548 GSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNIL--IHG 588
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ SL G + F ++ + + D Y++L+C A + A +L E
Sbjct: 161 YNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMP 220
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRAY 181
G+ D+ + L+ + G EK + V + + K+ + V+++G K +
Sbjct: 221 RSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRF 280
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+V+E++++ P +TY +I+ CR G A +V+ E+ + G Y+S+
Sbjct: 281 KEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSL 340
Query: 242 VAMYGKTGRIRDAMRL 257
V + + GR+++A +
Sbjct: 341 VKGFCQAGRVQEAWKF 356
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 45/272 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAF---YKIGDSEKVAALFLECESRKLDLTPSSTHM-YKI 65
YEKM G +S Y ++ F Y+ D+ ++ S+ D S T + Y
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRI-------YSKMADNGCSPTVITYNT 514
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L D L K+ + E R+M E G D + Y SLI S ++ A ++K+ KG
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D+ + L+ G V++ L V MK
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKE--------------------------- 607
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ C P VTY ++++ G KA ++ + + G + +++Y++ +
Sbjct: 608 -------KKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGL 660
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
RI + ++L+ ++ +G P V +N L+
Sbjct: 661 CSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV +++ L + P +TY++++ + A + EM + G VV Y++++
Sbjct: 177 AVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLG 236
Query: 244 MYGKTGRIRDAMRLVAKM-KPKGCEPNVWIYNSLMD---MHGR------------AKNLR 287
K G MR+ K+ K G PN+ YN ++D GR A NL+
Sbjct: 237 GCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296
Query: 288 -QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ Y +I + + D + Y+E G VID AM +V F + +++E
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQE 352
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCI-----PGQVTYASIINAYCRIGLYSKAEKVFIE 225
+++ F + R + A + L S G P TY ++ + C G +A +F
Sbjct: 125 LLDAFVRARRFSDADAFFASL-SHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDS 183
Query: 226 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++++ + YS+++ K R+ A+ L+ +M G +P+V YN+L+
Sbjct: 184 LRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALL 235
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 122/259 (47%), Gaps = 1/259 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y + +LG++ + I K +M G + Y LI S+ + A +F +
Sbjct: 482 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 541
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G D + L+ ++ + G ++ +++ + M+ L+ VI+N K
Sbjct: 542 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 601
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AA K++ +++ QGC P VTY +++ + + Y A K++ +MQ GF+ V YS
Sbjct: 602 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 661
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
++ + G G + +A + +M+ K P+ +Y L+D+ G+A N+ + ++ +
Sbjct: 662 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 721
Query: 301 MAREFDMCVKFYNEF-RMN 318
+ C + F R+N
Sbjct: 722 LRPNVPTCNSLLSTFLRVN 740
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ V+ Q+ GC P +VTY ++I+ + + G A ++ MQ G YS ++
Sbjct: 535 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 594
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
GK G + A +L +M +GC PN+ YN +MD+H +A+N + K
Sbjct: 595 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 654
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ V+ + + E + + D + G++V ++ K +E+
Sbjct: 655 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 709
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ + +M+ AG D YC +++ K G + ++ ++ L T Y ++
Sbjct: 536 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS---PDTFTYSVI 592
Query: 67 CDSLGKSG----------------------------------RAFE-ILKFFRDMKEKGI 91
+ LGK+G R ++ LK +RDM+ G
Sbjct: 593 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 652
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D Y+ ++ ++ AE +F E ++K + D V+ LV ++ + G VEK +
Sbjct: 653 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 712
Query: 152 VVESMKNAEL--NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
++M +A L N+ C S +++ F + A ++ + +++ G P TY +++
Sbjct: 713 WYQAMLHAGLRPNVPTCNS--LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 769
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q+ L Y M++AG D Y +ME G E+ A+F E + + + P
Sbjct: 636 NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK--NWIPDEP- 692
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D GK+G + ++++ M G+ + SL+ +F + ++ A EL +
Sbjct: 693 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 752
Query: 122 EEKGMLRDLEVFLKLV 137
G+ L+ + L+
Sbjct: 753 LALGLRPSLQTYTLLL 768
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 149/341 (43%), Gaps = 43/341 (12%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
C+ ++E D K+ +F E + R L +T S+ + L S G G E+L +
Sbjct: 152 CHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANS---LIKSFGNLGLVEELLWVW 208
Query: 84 RDMKEKGILEDPSVYAS--LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
R MKE GI DPS+Y L+ + ++ AE++F+ + ++ D + ++ Y
Sbjct: 209 RRMKENGI--DPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC 266
Query: 142 EEGMVEKTLEVVESM--KN----------------AELNISDCIS--------------- 168
+ G ++K +E M KN +E + C+S
Sbjct: 267 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 326
Query: 169 --CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
+++ G K+R A V+E + +GC Y ++I++Y + G +A ++F M
Sbjct: 327 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM 386
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ +GF+ V YS +V K+GR+ D M L + KG N Y SL+D G+A +
Sbjct: 387 KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRI 446
Query: 287 RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
E +S AR+ C + G ID+A+A
Sbjct: 447 EDAENLFEEMSEKGCARD-SYCYNAIIDALAKHGKIDQALA 486
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 128/273 (46%), Gaps = 3/273 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + + M+ + D Y +++A Y D + +L+LE E R L++ P H Y
Sbjct: 272 QKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPP---HSY 328
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ L K + E F M +KG + ++Y +LI S++ ++ A LF+ +
Sbjct: 329 SLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKN 388
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G D + LV + G ++ +E+ + +N + I+ +++G K
Sbjct: 389 EGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIED 448
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++E++ +GC Y +II+A + G +A +F M+++G D+ V ++ ++
Sbjct: 449 AENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILID 508
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
K + +A++ KM KG P V + +L
Sbjct: 509 GLFKEHKNEEAIKFWDKMIDKGITPTVASFRAL 541
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 129/271 (47%), Gaps = 7/271 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMYKILCD 68
+E M IV D+ Y +++ + K G +K F + E + ++ P T+M I
Sbjct: 243 FEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMK--NVKPDKITYMTLI--- 297
Query: 69 SLGKSGRAFEI-LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
S R F+ L + +M+E+G+ P Y+ +I + A +F+ +KG
Sbjct: 298 QACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCR 357
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ ++ L+ Y + G +E+ + + E MKN V+VNG K +++
Sbjct: 358 ANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMEL 417
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ ++G + YAS+I+ + G AE +F EM +KG + Y++++ K
Sbjct: 418 FDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAK 477
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G+I A+ L +M+ +GC+ V+ + L+D
Sbjct: 478 HGKIDQALALFGRMEEEGCDQTVYTFTILID 508
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 126/276 (45%), Gaps = 4/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M G + Y +++++ K G E+ LF ++ + P + Y +L +
Sbjct: 348 FETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFE--PDAV-TYSVLVNG 404
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR + ++ F + KG+ + YASLI ++ AE LF+E EKG RD
Sbjct: 405 LCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARD 464
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + G +++ L + M+ + + ++++G K A+K ++
Sbjct: 465 SYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWD 524
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++I +G P ++ ++ C G ++A K+ ++ G A+ M+ K
Sbjct: 525 KMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIP-ETAFEDMINTLCKAQ 583
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
RI++A +L + +G E I L++ +A N
Sbjct: 584 RIKEACKLADGIVDRGREIPGRIRTVLINALRKAGN 619
>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 145/332 (43%), Gaps = 32/332 (9%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSST--HMYKI 65
+E+M+ + D Y ++ F K G + + + E ++ DL S + +
Sbjct: 178 FEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRK 237
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
LCD +A I F +K GI D Y S+I F + A L E G
Sbjct: 238 LCDY----SKAISI---FSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGG 290
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAA 184
++ D + L+ MY+E G + L V M + D +C V+++ + + A
Sbjct: 291 VMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPL-DLTTCNVMIDVYGQLDMAKEA 349
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++ + G PG V+Y +++ Y L+ +A +F MQ+K ++ VV Y++M+ +
Sbjct: 350 DRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKI 409
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
YGK+ A LV +M+ +G EPN Y+T+IS ++ A +
Sbjct: 410 YGKSLEHEKATNLVQEMQNRGIEPNAIT-------------------YSTIISIWDKAGK 450
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
D + + R +G ID+ + M+ + +
Sbjct: 451 LDRAAMLFQKLRSSGIEIDQVLYQTMIVAYER 482
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/255 (17%), Positives = 115/255 (45%), Gaps = 7/255 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M++ GI ++ Y I+ + K G ++ A LF + S +++ +Y+ + +
Sbjct: 424 QEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQV---LYQTMIVAY 480
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G + ++K D + I A ++ A +F++A + G ++D+
Sbjct: 481 ERAGLVAHAKRLLHELKRP----DNIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDI 536
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
VF ++ ++ +EV + M+ A + +++N K R + A +Y++
Sbjct: 537 TVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREFEKADAIYKE 596
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +GC+ + +++ Y G + + +F + + + ++Y + R
Sbjct: 597 MEEEGCVFSDEVHFQMLSLYGARGDFQMVDSLFERLDSDPNINKKELHLVVASIYERANR 656
Query: 251 IRDAMRLVAKMKPKG 265
+ DA +++ +M+ +G
Sbjct: 657 LNDASQIMNRMRERG 671
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 120/257 (46%), Gaps = 23/257 (8%)
Query: 105 FASIAEVKVAEELFK-EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI 163
ASI++ +EL+ + KG R L + + L+ E +++L +++ + N E +
Sbjct: 96 LASISQTSNEQELYSLMSPYKG--RQLSIRFMVSLLSREPDW-QRSLALLDWI-NEEASY 151
Query: 164 SDCISC--VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
S + V++ + + + A ++E++ + P + TY+++I + + G++ A
Sbjct: 152 SPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALS 211
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+M+Q +V YS+++ + K A+ + +++K G P++ YNS++++ G
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFG 271
Query: 282 RAKNLRQLE----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
+AK R+ Y+T++S Y ++ + ++E +D
Sbjct: 272 KAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLT 331
Query: 326 MAGIMVGVFSKLSQIEE 342
+M+ V+ +L +E
Sbjct: 332 TCNVMIDVYGQLDMAKE 348
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L L + GR E L F + +KG D +Y +LI F + ++FK +
Sbjct: 523 YTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQ 582
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ ++ L+ M+ EG VE LE++ + L ++ G+ + +
Sbjct: 583 SNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFS 642
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+K++E L P +T+ +I+AYC+ G A +F M ++G + ++ YS ++
Sbjct: 643 KAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLI 702
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y KT A L KM PN+ Y+ L+D
Sbjct: 703 DGYFKTENTESAFELYEKMLGDRVSPNIVSYSILID 738
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 143/316 (45%), Gaps = 27/316 (8%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILCDSLGKSG 74
G+ +D + IM+A+ ++GD K +E +R L ++P+ Y IL + L ++G
Sbjct: 340 GVKMDVVIFSSIMDAYVRVGDLGKA----IEVYTRMLKEGISPNVV-TYSILINGLCRNG 394
Query: 75 RAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R E F + ++G+ +PSV Y+SLI F ++ L+ KG + D+ V
Sbjct: 395 RVLEACGVFGQILKQGL--EPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVV 452
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
L+ +GM+++ L L +++ + +++G + + +K+Y +
Sbjct: 453 CSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMG 512
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
IP VTY ++ G +A +F ++ +KGF + Y +++ + K
Sbjct: 513 MYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPA 572
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQLEK-------------YTTVI 296
+++ M+ G P++ IYN L++M G +N+ +L + Y T+I
Sbjct: 573 TGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMI 632
Query: 297 SAYNMAREFDMCVKFY 312
Y + F +K +
Sbjct: 633 CGYCSLKIFSKAIKLF 648
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 109/227 (48%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y+ + +S K G + L F R + E+G++ ++ ++ VA + F
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G +L F L+ +Y +E +++ + M + I +++NG +
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
++ +++G V ++SI++AY R+G KA +V+ M ++G VV YS +
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ + GR+ +A + ++ +G EP+V Y+SL+D +++NLR
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRD 433
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 7/272 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + ++ G D YC +++ F K D +F +S + +Y +L
Sbjct: 540 LALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIF---PDICIYNVL 596
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ + G +L+ R++ + G+ D Y ++IC + S+ A +LF+ +
Sbjct: 597 INMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRT 656
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAA 184
+ F L+ Y ++G ++ + + SM + E NI SC+I +G+ K +A
Sbjct: 657 QPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT-YSCLI-DGYFKTENTESA 714
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++YE+++ P V+Y+ +I+ C+ GL +A F + V+AY ++
Sbjct: 715 FELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRG 774
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
Y K GR+ +AM L M G P+ + +L
Sbjct: 775 YCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 98/238 (41%), Gaps = 35/238 (14%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL + L ++G+ E LF A
Sbjct: 312 IYSILINGLFRAGKLEE-----------------------------------GNSLFSMA 336
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ D+ +F ++ Y+ G + K +EV M ++ + +++NG +
Sbjct: 337 LARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRV 396
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A V+ Q++ QG P +TY+S+I+ +C+ ++ M +KG VV S +
Sbjct: 397 LEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSML 456
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+ + G + +A+R + +G N +++N+L+D R K R K ++ Y
Sbjct: 457 INGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMY 514
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 157/357 (43%), Gaps = 19/357 (5%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + L ++E+M+ + + Y ++ A+ K+ +++ F S L+ +
Sbjct: 218 NLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL---KRIDEAFKLLRSMGLEGLEPNLL 274
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y ++ + L + GR E +M KG D Y +L+ + + A L E
Sbjct: 275 TYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM 334
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G+ D+ + L+ + G + + +E + M L + ++NGFS++
Sbjct: 335 LRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFM 394
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++++++I G P VTY +++N +C G +A + M+ KG VV+YS++
Sbjct: 395 DEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTI 454
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ--------LEK-- 291
+A + + + A ++ A+M KG P+ Y+SL+ + L + L K
Sbjct: 455 IAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSL 514
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT++I+ Y + + + ++E G + D +++ +K ++ E
Sbjct: 515 LPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTRE 571
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 130/281 (46%), Gaps = 22/281 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL +G L+FF +M+ L + Y ++I ++ + + A +L +
Sbjct: 206 YNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMG 265
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G+ +L + ++ G +E+T V+ M +VNG+ K +
Sbjct: 266 LEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFH 325
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ ++ +++ G P VTY S+IN C+ G ++A + F +M +G V Y+S++
Sbjct: 326 QALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLI 385
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKN----LRQLE----- 290
+ + G + +A R+ +M G P + YN+L++ H GR + LR +E
Sbjct: 386 NGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLS 445
Query: 291 ----KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
Y+T+I+ + +E D F+MN ++++ ++
Sbjct: 446 PDVVSYSTIIAGFCRYQELDRA------FQMNAEMVEKGVS 480
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 125/280 (44%), Gaps = 3/280 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G D Y ++ + K+G+ + AL L E + L P Y L +++
Sbjct: 298 EMDRKGFAPDGVTYNTLVNGYCKVGNFHQ--ALVLHSEMLRNGLPPDVV-TYTSLINTMC 354
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G ++FF M +G+ + Y SLI F+ + A ++ E G +
Sbjct: 355 KAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIV 414
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + G +E+ + ++ M+ L+ I+ GF + + A ++ ++
Sbjct: 415 TYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEM 474
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ +G P +TY+S+I C ++A +F EM K Y+S++ Y K G +
Sbjct: 475 VEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDL 534
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+A+ L +M KG P+ YN L++ + R+ ++
Sbjct: 535 NEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKR 574
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
K +R+M G+ + Y LI F + +++ F+E E L ++ + ++ Y
Sbjct: 189 KVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAY 248
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ +++ +++ SM L + +++NG + V ++ +G P
Sbjct: 249 CKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDG 308
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY +++N YC++G + +A + EM + G VV Y+S++ K G + AM +
Sbjct: 309 VTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQ 368
Query: 261 MKPKGCEPNVWIYNSLMD 278
M +G PN Y SL++
Sbjct: 369 MHVRGLRPNGVTYTSLIN 386
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 135/305 (44%), Gaps = 18/305 (5%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + ++++M G+ + Y ++ F + G ++ ++ E P +
Sbjct: 358 NLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGF---PPTIV 414
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L + SGR E + R M+ KG+ D Y+++I F E+ A ++ E
Sbjct: 415 TYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEM 474
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
EKG+ D + L+ E+ + + ++ + M N L + ++NG+ K
Sbjct: 475 VEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDL 534
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM-------QQKGFDKC 234
A+ +++++I +G +P VTY +IN + +A+++ +++ +D
Sbjct: 535 NEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTL 594
Query: 235 V-----VAYSSMVAM---YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ + + S+VA+ + G + +A ++ M + +PN +YN ++ H R N+
Sbjct: 595 IESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNV 654
Query: 287 RQLEK 291
+ K
Sbjct: 655 HKAHK 659
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 110/272 (40%), Gaps = 37/272 (13%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ G+ D Y I+ F + + ++ A + E + ++P + Y L L +
Sbjct: 439 MEGKGLSPDVVSYSTIIAGFCRYQELDR--AFQMNAEMVEKGVSPDAI-TYSSLIQGLCE 495
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R E F++M K +L D Y SLI + ++ A L E +KG L D
Sbjct: 496 QRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVT 555
Query: 133 F------------------LKLVLMY---IEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+ L L L Y I G+ TL +ES + E +
Sbjct: 556 YNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTL--IESCSDIEFKSV----VAL 609
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ GF + A +V+E +I + P + Y II+ +CR G KA K++ EM GF
Sbjct: 610 IKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGF 669
Query: 232 DKCVVAYSSMV-AMYGKTGR------IRDAMR 256
V ++V A+Y + IRD +R
Sbjct: 670 IPHTVTIIALVKALYSEGMDEQLNLVIRDILR 701
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
R+ A KVY ++I+ G +Y +I +C G + F EM++ VV
Sbjct: 181 RKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVT 240
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------- 290
Y++++ Y K RI +A +L+ M +G EPN+ YN +++ R + +
Sbjct: 241 YNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMD 300
Query: 291 ---------KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y T+++ Y F + ++E NG
Sbjct: 301 RKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNG 338
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 18/272 (6%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G+ D+ Y +++ + + LF E ++ L P Y L +
Sbjct: 473 EMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSL--LPDE-FTYTSLINGYC 529
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL-----FKEAEEKGM 126
K G E L +M +KG L D Y LI A + A+ L + E+ G+
Sbjct: 530 KEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGI 589
Query: 127 LRDL------EVFLKLVLMYIE----EGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
D ++ K V+ I+ +G++ + +V ESM ++ + VI++G
Sbjct: 590 TYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHC 649
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ A K+Y++++ G IP VT +++ A G+ + V ++ +
Sbjct: 650 RDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAE 709
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
++V + K G I L+ +M G P
Sbjct: 710 LSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 3/277 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M +G + D+ + ++ A E+ AL L E L+P+ + + IL ++L
Sbjct: 361 QMVDSGCLPDTTTFNTLIVALCTENQLEE--ALDLARELTVKGLSPN-VYTFNILINALC 417
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G ++ F +MK G D Y LI + S ++ A +L KE E G +
Sbjct: 418 KVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTV 477
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ ++ + +E+ EV + M + + +++G A ++ +Q+
Sbjct: 478 TYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQM 537
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
IS+G P VTY SI+ YC+ G SKA + M GF+ VV Y++++ K R
Sbjct: 538 ISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRT 597
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ A++L+ M+ KG +P YN ++ R N R
Sbjct: 598 QAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRD 634
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 132/302 (43%), Gaps = 36/302 (11%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL---C 67
E+M S + D + +ME F + G E AAL L+ ++ +P+S + ++ C
Sbjct: 220 EEMSSCDVAPDETTFTTLMEGFVEEGSIE--AALRLKARMSEMGCSPTSVTVNVLINGYC 277
Query: 68 ------DSLG-------------------------KSGRAFEILKFFRDMKEKGILEDPS 96
D+LG ++G LK M ++G D
Sbjct: 278 KLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVY 337
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
Y+++I + E++ A+ + + + G L D F L++ E +E+ L++ +
Sbjct: 338 TYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAREL 397
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
L+ + +++N K AV+++E++ S GC P +VTY +I+ C G
Sbjct: 398 TVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKL 457
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+KA + EM+ G + V Y++++ K RI +A + +M G N +N+L
Sbjct: 458 AKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTL 517
Query: 277 MD 278
+D
Sbjct: 518 ID 519
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 2/230 (0%)
Query: 50 SRKLDL--TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFAS 107
S +LD+ ++T +Y L L + + + + +M +GI D + ++I +
Sbjct: 149 SNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCR 208
Query: 108 IAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI 167
+ + A + +E + D F L+ ++EEG +E L + M + +
Sbjct: 209 ARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVT 268
Query: 168 SCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
V++NG+ K A+ +Q I+ G P +VT+++ +N C+ G A KV M
Sbjct: 269 VNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLML 328
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Q+G + V YS+++ G + +A +V +M GC P+ +N+L+
Sbjct: 329 QEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLI 378
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 3/246 (1%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
++ A K+GD LF E +S TP Y IL D+L SG+ + L ++M+
Sbjct: 412 LINALCKVGDPHLAVRLFEEMKSSGC--TPDEV-TYNILIDNLCSSGKLAKALDLLKEME 468
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
G + Y ++I ++ AEE+F + + G+ R+ F L+ ++
Sbjct: 469 VSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERID 528
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
E+V+ M + L ++ I+ + K+ A + + + + G VTYA++I
Sbjct: 529 DAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLI 588
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N C+ A K+ M+ KG AY+ ++ + RDA+ L +M G
Sbjct: 589 NGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGP 648
Query: 268 PNVWIY 273
P+ + Y
Sbjct: 649 PDAFTY 654
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 99/203 (48%), Gaps = 2/203 (0%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
AF+++ DM G+ + VY L+ A +++K+ E + E +G+ D+ F
Sbjct: 144 AFDLVSNQLDMF--GVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNT 201
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
++ + ++E M + ++ + ++ GF + + AA+++ ++ G
Sbjct: 202 VIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMG 261
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C P VT +IN YC++G A + GF+ V +S+ V + G + A+
Sbjct: 262 CSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHAL 321
Query: 256 RLVAKMKPKGCEPNVWIYNSLMD 278
+++ M +GCEP+V+ Y+++++
Sbjct: 322 KVLGLMLQEGCEPDVYTYSTVIN 344
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 106/263 (40%), Gaps = 4/263 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ +E+MKS+G D Y +++ G K L E E + P ST Y +
Sbjct: 426 VRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEME---VSGCPQSTVTYNTI 482
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K R E + F M GI + + +LI + + A EL + +G+
Sbjct: 483 IDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGL 542
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + ++ Y ++G + K +++++M + ++NG K R AA+K
Sbjct: 543 QPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALK 602
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMY 245
+ + +G P Y +I + R A +F EM + G Y + +
Sbjct: 603 LLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLC 662
Query: 246 GKTGRIRDAMRLVAKMKPKGCEP 268
G I++A + +M G P
Sbjct: 663 RGGGPIKEAFDFLVEMADNGFIP 685
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 153/325 (47%), Gaps = 19/325 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ L++ CY +++ + + D +V L E+ ++ T + Y IL DSL
Sbjct: 156 DEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGT---YTILVDSL 212
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+G ++ +MK K + D +Y ++I ++ V+ A E+F E G+ +
Sbjct: 213 STAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNE 272
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + + G +E ++ M+ + + I +++G+ ++ A+KV
Sbjct: 273 RTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAA 332
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G TY ++ CR+ ++A+ + M +KG V Y+++++++ K G
Sbjct: 333 MEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGD 392
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
+ +A RL +M KG P+V YN +MD + + ++R+ E+ Y +
Sbjct: 393 MVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYAS 452
Query: 295 VISAYNMAREFDMCVKFYNEFRMNG 319
++ + + + D+ +K + E + G
Sbjct: 453 LVHGHCVNGKVDVALKLFEEMKHRG 477
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 3/261 (1%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
GI + Y ++ F KIG E L + + R + + ++ + D + G
Sbjct: 267 GIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVG---HNQIIFNTMIDGYCRQGMV 323
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
LK M++ GI D Y +L C + + A+ L EKG+ + + L
Sbjct: 324 DNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTL 383
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ ++ +EG + + + M S V+++G+ K+ + A + +++ +G
Sbjct: 384 ISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGL 443
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
+P TYAS+++ +C G A K+F EM+ +G + VVAY+++++ K GR +A +
Sbjct: 444 VPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQ 503
Query: 257 LVAKMKPKGCEPNVWIYNSLM 277
L M G P+ +Y++L+
Sbjct: 504 LYDDMLKAGLTPDDSLYSALV 524
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 136/313 (43%), Gaps = 22/313 (7%)
Query: 50 SRKLDLTPSSTHMY--KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFAS 107
+R L P S ++ D KSGR + +M G+ + Y SL+ +
Sbjct: 120 TRALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVR 179
Query: 108 IAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI 167
+ +EL + E G+ + + LV G + K VV+ MK + +
Sbjct: 180 RKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYL 239
Query: 168 SCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
++N + + A +V+++ + G P + TY +IN +C+IG AE + +MQ
Sbjct: 240 YTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQ 299
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL------MDMHG 281
+G + +++M+ Y + G + +A+++ A M+ G E +V+ YN+L ++
Sbjct: 300 GRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMA 359
Query: 282 RAKNLRQ--LEK--------YTTVISAYNMAREFDM--CVKFYNEFRMNGGVIDRAMAGI 329
AK L +EK YTT+IS + +E DM + + E G + +
Sbjct: 360 EAKTLLHIMIEKGVPPNYVTYTTLISIH--CKEGDMVEARRLFREMAGKGAMPSVVTYNV 417
Query: 330 MVGVFSKLSQIEE 342
M+ + K I E
Sbjct: 418 MMDGYIKKGSIRE 430
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + Y L K G E + FR+M KG + Y ++ + ++ AE
Sbjct: 374 PPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAER 433
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
KE E+KG++ D+ + LV + G V+ L++ E MK+ + +++G +
Sbjct: 434 FRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLA 493
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
K A ++Y+ ++ G P Y++++ +
Sbjct: 494 KEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGS 526
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 134/278 (48%), Gaps = 17/278 (6%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+T Y L +L + R I +M+E GI D + ++I +F+ VK A E+F
Sbjct: 91 TTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAMEIF 150
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSK 177
++ EE G F L+ Y E++++++E M + L ++ ++V K
Sbjct: 151 QKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCK 210
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+++ A V Q+++ G P VTY ++ AY + G +KAE + ++M K +
Sbjct: 211 KKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERT 270
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLE 290
+V Y + G + +A+R+V +M+ G PN+ I+NSL+ D G K L +E
Sbjct: 271 CGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMME 330
Query: 291 K---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ ++T+++ ++ A D C + +++ +G
Sbjct: 331 ESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSG 368
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 121/289 (41%), Gaps = 4/289 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ GI DS I+ AF + G+ ++ +F + E T S+ + L G
Sbjct: 117 EMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTST---FNTLIKGYG 173
Query: 72 KSGRAFEILKFFRDM-KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ E +K M + + + Y L+ + +K A + + G+ D+
Sbjct: 174 IIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDV 233
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L Y ++G K ++ M N ++N ++ +IV G+ ++ A++V +
Sbjct: 234 VTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYR 293
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P V + S+I + IG +K M++ G V+ +S+++ + GR
Sbjct: 294 MRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGR 353
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+ + M G EP++ +++ L RA + E +S Y
Sbjct: 354 MDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKY 402
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 147/361 (40%), Gaps = 38/361 (10%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + ++KM+ +G + + +++ + I E+ L LE +R +L P++
Sbjct: 142 NVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKL-LELMTRTTNLKPNN-R 199
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL +L K E M G+ D Y +L ++A E AE + +
Sbjct: 200 TYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDM 259
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
K + + +V Y E+G + + L VV M++ ++ + I ++ GF
Sbjct: 260 LNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDS 319
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK-------- 233
K + G P +T+++I+N + G K +++F +M + G +
Sbjct: 320 DGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSIL 379
Query: 234 ---------------------------CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
VV ++++++ + G++ A ++ M
Sbjct: 380 AKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDV 439
Query: 267 EPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
PN+ + +L+ +G AK + E+ ++ N+ E + +K +E + G+++ A
Sbjct: 440 SPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPE-NSTLKLVSEAWRSIGMVNDAK 498
Query: 327 A 327
A
Sbjct: 499 A 499
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 51/95 (53%)
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ L+ QG P VTY +++ A R + + EM++ G + ++++ +
Sbjct: 79 IFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFS 138
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++G +++AM + KM+ GC+P +N+L+ +G
Sbjct: 139 ESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYG 173
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 81/215 (37%), Gaps = 42/215 (19%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + L + G+ E F + E+G Y +L+ + K L E EE G
Sbjct: 63 LMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG 122
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D + L I+N FS+ A+
Sbjct: 123 IKPD-SILLN----------------------------------AIINAFSESGNVKEAM 147
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV--FIEMQQK--GFDKCVVAYSSM 241
++++++ GC P T+ ++I Y G+ K E+ +E+ + Y+ +
Sbjct: 148 EIFQKMEESGCKPTTSTFNTLIKGY---GIIRKPEESMKLLELMTRTTNLKPNNRTYNIL 204
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
V K I++A +V +M G +P+V YN+L
Sbjct: 205 VGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTL 239
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 136/292 (46%), Gaps = 8/292 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+++K+ + G LD Y ++ K+G++ L + + + L MY +
Sbjct: 29 FHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAV---MYNTVIY 85
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ K + + +M KGI + Y++LI F + ++K A +LF + + +
Sbjct: 86 GMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKP 145
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKV 187
D F LV + ++ +++ V M + I D ++ +V+G+ + A +
Sbjct: 146 DGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGI-IPDVVTYNSLVDGYRLVKEVNTAKSI 204
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ + G P +Y +IN +C+I KA +F EM K VV Y+S++ K
Sbjct: 205 FNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSK 264
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+GRI A++LV +M +G PN+ YNS++D + Q++K +I+ +
Sbjct: 265 SGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT---HQVDKAIALITKF 313
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 124/285 (43%), Gaps = 45/285 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
Y +M S GI + Y ++ F+ +G + LF + E+ K D + + IL
Sbjct: 100 YSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPD-----GYTFNILV 154
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D K + E F M ++GI+ D Y SL+ + + EV A+ +F + G+
Sbjct: 155 DGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVN 214
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ + +++NGF K + A+ +
Sbjct: 215 PDIRSY-----------------------------------NILINGFCKIKKVDKAMNL 239
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ ++ + IP VTY S+I+ + G S A ++ +M +G ++ Y+S++ K
Sbjct: 240 FNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFK 299
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
T ++ A+ L+ K K +G +P+++ Y L+D GR K+ R +
Sbjct: 300 THQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNI 344
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/188 (18%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+++G K AA+ + +++ + V Y ++I C+ + A ++ EM KG
Sbjct: 48 LIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG 107
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-- 288
VV YS++++ + G+++DA+ L K+ + +P+ + +N L+D + + +++
Sbjct: 108 ISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGK 167
Query: 289 --------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
+ Y +++ Y + +E + +N G D I++ F
Sbjct: 168 TVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGF 227
Query: 335 SKLSQIEE 342
K+ ++++
Sbjct: 228 CKIKKVDK 235
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ G + A +++L++ G QV+Y ++I+ C++G A + + K
Sbjct: 13 LIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKL 72
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V Y++++ K + DA L ++M KG PNV Y++L+
Sbjct: 73 VQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 119
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/182 (17%), Positives = 75/182 (41%), Gaps = 3/182 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M GI+ D Y +++ + + + ++F ++ S Y IL +
Sbjct: 170 FAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRS---YNILING 226
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K + + + F +M K I+ + Y SLI + + A +L + ++G+ +
Sbjct: 227 FCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPN 286
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ + V+K + ++ K+ + S ++++G K A ++E
Sbjct: 287 ILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFE 346
Query: 190 QL 191
L
Sbjct: 347 DL 348
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M+++G++ + Y +M+ + KI +K L+ E L P+ + IL D
Sbjct: 251 FRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGD--GLLPNVV-TFGILIDG 307
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ KF DM G++ + VY LI + + A L E E+ +L D
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ +E+ +++ MK + +++G+ K A++V
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+ +G P +T++++I+ YC+ G A ++ EM KG VVAY++++ + K G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++A RL +M+ G PNV+ + L+D
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLID 516
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 135/281 (48%), Gaps = 17/281 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y M + G + Y +++ + GD K LF E +K+ T +Y IL
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT---VVIYTILIRG 237
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L R E FR M+ G+L + Y +++ + IA VK A EL+ E G+L +
Sbjct: 238 LCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPN 297
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMK----NAELNISDCI---SCVIVNGFSKRRAYW 182
+ F L+ +G+ KT E+V + K A + I +C+I +G+ K
Sbjct: 298 VVTFGILI-----DGLC-KTDEMVSARKFLIDMASFGVVPNIFVYNCLI-DGYCKAGNLS 350
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ ++ ++ +P TY+ +I C + +A+ + EM++KGF V Y++++
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y K G + A+ + ++M KG EPN+ +++L+D + +A
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 13/229 (5%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L D K+G E L ++++ IL D Y+ LI + ++ A+ L +E
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++KG L + + L+ Y +EG +EK +EV M + + +++G+ K
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AA+ +Y +++ +G +P V Y ++I+ + + G +A ++ EMQ+ G V S +
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514
Query: 242 VAMYGKTGRIRDAMRL-------------VAKMKPKGCEPNVWIYNSLM 277
+ K GRI DA++L ++ C PN +Y +L+
Sbjct: 515 IDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 131 EVFLKLVLMYIEEGMVEKTL------EVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
VF L++ + E G+VE+ L +V+ +M+ + +++G K+ +
Sbjct: 127 NVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNM---------VLDGLVKKGRFDTM 177
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
KVY ++++G P VTY ++I+ CR G + KA ++F EM +K VV Y+ ++
Sbjct: 178 WKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRG 237
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKYTTVI 296
RI +A + M+ G PN++ YN++MD + + ++++ LE Y ++
Sbjct: 238 LCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEML 290
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 16/288 (5%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L + +++ I+ D Y +++ + E+ L E +K P++
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE--MKKKGFLPNAV- 404
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D K G + ++ M EKGI + +++LI + +++ A L+ E
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
KG+L D+ + L+ + ++G ++ + + M+ A L+ + +++G K
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524
Query: 182 WAAVKVY-------------EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
A+K++ +L C P V Y ++I C G KA K F +M+
Sbjct: 525 SDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRC 584
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
G V ++ + + +RD M L A + G PN +Y L
Sbjct: 585 SGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
K+D+ P+ +L D L K GR + K + DM +G + Y +LI +
Sbjct: 151 KMDVLPAMQACNMVL-DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A LF E EK + + ++ L+ E + + + +M+N+
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNS------------ 257
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
G +P TY ++++ YC+I KA +++ EM G
Sbjct: 258 -----------------------GMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGL 294
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
VV + ++ KT + A + + M G PN+++YN L+D + +A NL +
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 3/280 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KMK + D Y +++ F GDS+ V ++ + K D + Y + D+
Sbjct: 323 FWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIW---NAMKADGYNDNVVAYTAVIDA 379
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + GR FE L+ F +MK+KGI+ + Y SLI F A ELFK + G +
Sbjct: 380 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 439
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + Y + G K ++ E MK+ + ++ G +K A +V+
Sbjct: 440 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 499
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L + G P +TY +I + + +A K+F +M + V+A +S++ K G
Sbjct: 500 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 559
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
R +A R+ ++K EP YN+L+ GR ++++
Sbjct: 560 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEV 599
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 155/349 (44%), Gaps = 25/349 (7%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK AGIVL++ Y ++ K G + ++ +D S Y +L + GK
Sbjct: 186 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY---RVMMVDGVVPSVRTYSVLMVAFGK 242
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK---EAEEKGMLRD 129
+L R+M+ G+ P+VY+ IC + + K +E ++ + E +G D
Sbjct: 243 RRDVETVLWLLREMEAHGV--KPNVYSYTIC-IRVLGQAKRFDEAYRILAKMENEGCKPD 299
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + + G + +V MK ++ +++ F + ++++
Sbjct: 300 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN 359
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + G V Y ++I+A C++G +A ++F EM+QKG +Y+S+++ + K
Sbjct: 360 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 419
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-KNLRQLEKY---------------T 293
R DA+ L M G +PN + + ++ +G++ ++++ +++Y
Sbjct: 420 RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 479
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
V+ + M + ++E + G D +M+ SK S+ +E
Sbjct: 480 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDE 528
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 2/214 (0%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L L K +A E + + K G+ +Y SLIC + +AE LF E +E G
Sbjct: 761 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 820
Query: 126 MLRDLEVFLKLVLMYIEEGM-VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D E L+L + + M +E+ L+V E M + I++G K R A
Sbjct: 821 CGPD-EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 879
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ +Y L+SQG P TY +++ + G AE +F EM + G Y+ ++
Sbjct: 880 IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 939
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ G L M +G P++ Y ++D
Sbjct: 940 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/371 (19%), Positives = 143/371 (38%), Gaps = 57/371 (15%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y M G+V Y +M AF K D E V L E E+ + + + Y I
Sbjct: 215 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVK---PNVYSYTIC 271
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
LG++ R E + M+ +G D + LI + A+++F + ++
Sbjct: 272 IRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 331
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D ++ L+ + + G + +E+ +MK N + +++ + + A++
Sbjct: 332 KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE 391
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM-------------------- 226
+++++ +G +P Q +Y S+I+ + + + A ++F M
Sbjct: 392 MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYG 451
Query: 227 ---------------QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ KG VVA ++++ K+GR+ A R+ ++K G P+
Sbjct: 452 KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 511
Query: 272 IYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
YT +I + A +FD VK + + N V D ++
Sbjct: 512 T-------------------YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLI 552
Query: 332 GVFSKLSQIEE 342
K + +E
Sbjct: 553 DTLYKAGRGDE 563
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 115/276 (41%), Gaps = 10/276 (3%)
Query: 18 IVLDSGCYCQIMEAFYKIGDSEKVAAL----FLECESRKLDLTPSSTHMYKILCDSLGKS 73
++ D C I+ +F KIG ++ + FL+ S K D + + M IL K
Sbjct: 680 LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGS-KTDRSSCHSLMEGIL-----KK 733
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
+ ++F + GI D LI + A EL K+ + G+ ++
Sbjct: 734 AGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLY 793
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ ++E +++ + MK + ++++ K +KV E++
Sbjct: 794 NSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 853
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G VTY +II+ + +A ++ + +GF Y ++ K GRI D
Sbjct: 854 KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIED 913
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
A L +M GC+ N IYN L++ H A N ++
Sbjct: 914 AENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKV 949
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 138/356 (38%), Gaps = 33/356 (9%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ ++K + G Y ++ + G ++V L E P + Y + D
Sbjct: 568 FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNY---PPNLITYNTILDC 624
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA------EE 123
L K+G + L M KG + D S Y ++I V EE + EA +
Sbjct: 625 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL-------VKEERYNEAFSIFCQMK 677
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYW 182
K ++ D ++ +++ G++++ L +++ + +D SC ++ G K+
Sbjct: 678 KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE 737
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+++ E + S G +I C+ +A ++ + + G Y+S++
Sbjct: 738 KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLI 797
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------- 291
I A L A+MK GC P+ + YN L+D G++ + ++ K
Sbjct: 798 CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE 857
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y T+IS +R + + Y G G ++ K +IE+
Sbjct: 858 STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIED 913
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 137/284 (48%), Gaps = 19/284 (6%)
Query: 23 GC--YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
GC Y I++ F+K GD++ + E + +P+ + L + KS R L
Sbjct: 589 GCTSYNSIIDGFFKEGDTDSAVEAYREMSENGI--SPNVV-TFTSLINGFCKSNRMDLAL 645
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ +MK K + D Y +LI F ++K A LF E E G++ ++ V+ L+ +
Sbjct: 646 EMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGF 705
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISC------VIVNGFSKRRAYWAAVKVYEQLISQ 194
G ++ +++ + M ++D ISC +++G K A +Y +L++
Sbjct: 706 RNLGKMDAAIDLYKKM------VNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLAL 759
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G +P ++ Y ++N + G + +A K+ EM++K V+ YS+++A + + G + +A
Sbjct: 760 GIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEA 819
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
R+ +M KG + I+N L+ GR + K +++ S
Sbjct: 820 FRVHDEMLEKGLVHDDTIFNLLVS--GRVEKPPAAAKISSLASP 861
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 154/341 (45%), Gaps = 24/341 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G+ ++ Y +++ F+K D + + + + + ++ +Y + +
Sbjct: 507 FSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFE---ANEVIYNTIING 563
Query: 70 L---GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L G++ +A E+L+ +KEK + Y S+I F + A E ++E E G+
Sbjct: 564 LCKVGQTSKAKEMLQNL--IKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGI 621
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ F L+ + + ++ LE++ MK+ +L + +++GF K+ A
Sbjct: 622 SPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYT 681
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ +L+ G +P Y ++I+ + +G A ++ +M G + Y++M+
Sbjct: 682 LFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLL 741
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR-------AKNLRQLEK-------- 291
K G + A L +++ G P+ +Y L++ + +K L +++K
Sbjct: 742 KDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVL 801
Query: 292 -YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
Y+TVI+ ++ + + ++E G V D + ++V
Sbjct: 802 IYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLV 842
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 125/278 (44%), Gaps = 15/278 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ +M+ G+ D + ++E F K + EK ++ +S + + PSS ++K++
Sbjct: 365 LDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKS--VGIAPSSVLVHKMI 422
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICS-----FASIAEVKVAEELFKEA 121
L K+ L+ F D E I +C+ +V A +
Sbjct: 423 QGCL-KAESPEAALEIFNDSFETWIAH------GFMCNKIFLLLCKQGKVDAATSFLRMM 475
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E KG+ ++ + ++L + ++ + M L ++ ++++GF K +
Sbjct: 476 ENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDE 535
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM-QQKGFDKCVVAYSS 240
A +V Q+I+ +V Y +IIN C++G SKA+++ + ++K + +Y+S
Sbjct: 536 QNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNS 595
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ + K G A+ +M G PNV + SL++
Sbjct: 596 IIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLIN 633
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG-MLRDLEVFLKL 136
E +K FR + +G D +++ + + + ++ +A +L +E EKG + E + +
Sbjct: 257 EAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSV 316
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
++ ++EG +E+ ++V + M + +S + ++ GF A+ + ++ +G
Sbjct: 317 IVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGL 376
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF-----------DKCVVAYSSMVAM- 244
P +V ++ +I +C+ KA +++ M+ G C+ A S A+
Sbjct: 377 APDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALE 436
Query: 245 -----------YG-----------KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+G K G++ A + M+ KG EPNV YN++M H R
Sbjct: 437 IFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCR 496
Query: 283 AKNL 286
KN+
Sbjct: 497 MKNM 500
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 123/273 (45%), Gaps = 11/273 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ ++ S G D + ++A K+ D V AL L E R+ P+S Y + +
Sbjct: 262 FRRVMSRGAEPDGLLFSLAVQAACKMKD--LVMALDLLREMREKGGVPASQETYTSVIVA 319
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G E +K +M GI SLI F + E+ A + F EE+G+ D
Sbjct: 320 CVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPD 379
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV-- 187
+F ++ + + +EK +E+ + MK+ + S + ++ G K + AA+++
Sbjct: 380 KVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFN 439
Query: 188 --YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+E I+ G + + I C+ G A M+ KG + VV Y++M+ +
Sbjct: 440 DSFETWIAHGFMCNK-----IFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAH 494
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ + A + ++M KG +PN + Y+ L+D
Sbjct: 495 CRMKNMDLARSIFSEMLEKGLQPNNFTYSILID 527
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG-FDKCV 235
+ R A+K++ +++S+G P + ++ + A C++ A + EM++KG
Sbjct: 251 RERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQ 310
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
Y+S++ K G + +A+++ +M G +V T++
Sbjct: 311 ETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVI-------------------AATSL 351
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
I+ + E + F+N G D+ M +M+ F K ++E+
Sbjct: 352 ITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEK 398
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 3/267 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M S D+ Y ++ + K + +K F + S TP + Y L D
Sbjct: 846 YKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRT---YGPLIDG 902
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K GR E ++ F +M + G + +++ LI + I + + A +LFK +G+ D
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+ + LV G V++ L +K+ L+ I+NG K + A+ +Y
Sbjct: 963 LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYN 1022
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ ++G +P TY S++ G+ +A++++ E+Q G + V Y++++ Y +
Sbjct: 1023 EMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A + M GC PN+ Y L
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 152/352 (43%), Gaps = 54/352 (15%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y +M S G+ Y +M A K DSE V L E E L L P+ + + I
Sbjct: 212 LEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMED--LGLRPN-VYTFTIC 268
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
LG++G+ E + FR M ++G D Y LI + + +++ A+ELF + + G
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D +++ L+ + + G ++ E +W+
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKE-----------------------------FWS--- 356
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
Q+ + G +P VT+ +++ C+ + +A F M+++G + Y++++
Sbjct: 357 ---QMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLL 413
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----KNLRQLEK------YTTVI 296
+ GRI DA++L+ M+ G +P + YN +D G++ K + EK ++
Sbjct: 414 RAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIV 473
Query: 297 ----SAYNMAR--EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
S Y++A +N R NG D +M+ +SK+ Q++E
Sbjct: 474 ACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDE 525
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 45/293 (15%)
Query: 6 KLHYYEK-------MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS 58
++HY EK MK+ G D+ + ++ K G ++ L+ E SR+ P
Sbjct: 800 EVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRC--KPD 857
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ Y I+ SL KS + L FF D+ P Y LI A + ++ A LF
Sbjct: 858 AI-TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E + G + +F +++NG+ K
Sbjct: 917 EEMSDYGCKPNCAIF-----------------------------------NILINGYGKI 941
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A +++++++++G P +Y +++ C G +A F E++ G D +AY
Sbjct: 942 GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ ++ GK+ R+ +A+ L +M+ +G P+++ YNSLM G A + Q ++
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKR 1054
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G D Y +++A G E LF++ ++ P +Y L D
Sbjct: 285 FRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH--KPDQV-IYITLLDK 341
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G +F+ M+ G + D + L+ + A F ++G+L +
Sbjct: 342 FNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPN 401
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + L+ + G +E L+++ +M++ + + + ++ F K AV+ +E
Sbjct: 402 LHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFE 461
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ ++G +P V + + + +G +A+ +F +++ G V Y+ M+ Y K G
Sbjct: 462 KMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVG 521
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +A+ L+++M GCEP+V + NSL+D
Sbjct: 522 QVDEAVNLLSEMIRNGCEPDVIVVNSLID 550
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 122/270 (45%), Gaps = 3/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ +M++ G + D + +++ K D ++ A F RK + P+ H Y L
Sbjct: 354 FWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF--DVMRKQGILPN-LHTYNTLIC 410
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L ++GR + LK M+ G+ Y I F E A E F++ + KG++
Sbjct: 411 GLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVP 470
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + E G + + + ++ L +++ +SK AV +
Sbjct: 471 NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLL 530
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++I GC P + S+I++ + G +A ++F M+ VV Y+++++ GK
Sbjct: 531 SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKE 590
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR++ A+ L M K C PN +N+L+D
Sbjct: 591 GRVQKAIELFESMIEKKCSPNTISFNTLLD 620
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 144/321 (44%), Gaps = 21/321 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILCDSL 70
M+S G+ + Y ++ F K G++ K F + +++ + ++ + +Y SL
Sbjct: 428 MESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLY-----SL 482
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ GR E F ++E G+ D Y ++ ++ + +V A L E G D+
Sbjct: 483 AEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
V L+ + G V++ ++ + MK+ +L+ + +++G K A++++E
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I + C P +++ ++++ +C+ A K+F +M V+ Y++++ K +
Sbjct: 603 MIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVK 310
+ A ++K K P+ +L L L K + A ++AR+F V+
Sbjct: 663 VNHAFWFFHQLK-KSMHPDHVTICTL---------LPGLVKCGQIGDAISIARDFMYQVR 712
Query: 311 FYNEFRMNGGVIDRAMAGIMV 331
FR+N + M G +V
Sbjct: 713 ----FRVNRSFWEDLMGGTLV 729
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 7/207 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTH 61
+ + +E+M G + + ++ + KIGD+E LF + E + DL
Sbjct: 910 EEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS---- 965
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL D L +GR E L +F ++K G+ D Y +I ++ A L+ E
Sbjct: 966 -YTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEM 1024
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G++ DL + L+L GMVE+ + E ++ A L ++ G+S
Sbjct: 1025 RNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENP 1084
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIIN 208
A VY+ ++ GC P TYA + N
Sbjct: 1085 EHAYTVYKNMMVDGCNPNIGTYAQLPN 1111
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 16/218 (7%)
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+E EK ++ + MKN +++ K ++Y+++IS+ C P
Sbjct: 799 LEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDA 858
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
+TY +I++ + KA F ++ F Y ++ K GR+ +AMRL +
Sbjct: 859 ITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEE 918
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLR----------------QLEKYTTVISAYNMARE 304
M GC+PN I+N L++ +G+ + L+ YT ++ +A
Sbjct: 919 MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
D + ++NE + G D ++ K ++EE
Sbjct: 979 VDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEE 1016
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 105/260 (40%), Gaps = 19/260 (7%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F M++K I D Y ++ + + ++ + + + G + + + L+ + I+
Sbjct: 145 FEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQ 204
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G + LEV M + L S ++ K+R + + +++ G P T
Sbjct: 205 SGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYT 264
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
+ I R G +A ++F M +G +V Y+ ++ G++ +A L KMK
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMK 324
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVI 322
G +P+ IY +L+D +N + D +F+++ +G +
Sbjct: 325 ANGHKPDQVIYITLLD-------------------KFNDFGDLDTFKEFWSQMEADGYMP 365
Query: 323 DRAMAGIMVGVFSKLSQIEE 342
D I+V V K +E
Sbjct: 366 DVVTFTILVDVLCKARDFDE 385
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 122/259 (47%), Gaps = 1/259 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y + +LG++ + I K +M G + Y LI S+ + A +F +
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G D + L+ ++ + G ++ +++ + M+ L+ VI+N K
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AA K++ +++ QGC P VTY +++ + + Y A K++ +MQ GF+ V YS
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSI 544
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
++ + G G + +A + +M+ K P+ +Y L+D+ G+A N+ + ++ +
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 301 MAREFDMCVKFYNEF-RMN 318
+ C + F R+N
Sbjct: 605 LLPNVPTCNSLLSTFLRVN 623
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ V+ Q+ GC P +VTY ++I+ + + G A ++ MQ G YS ++
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
GK G + A +L +M +GC PN+ YN +MD+H +A+N + K
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEP 537
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ V+ + + E + + D + G++V ++ K +E+
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N QS L Y M++AG D Y +ME G E+ A+F E + + + P
Sbjct: 519 NYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK--NWIPDEP- 575
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D GK+G + ++++ M G+L + SL+ +F + ++ A EL +
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 122 EEKGMLRDLEVFLKLV 137
G+ L+ + L+
Sbjct: 636 LALGLRPSLQTYTLLL 651
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ + +M+ AG D YC +++ K G + ++ ++ L T Y ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS---PDTFTYSVI 475
Query: 67 CDSLGKSG----------------------------------RAFE-ILKFFRDMKEKGI 91
+ LGK+G R ++ LK +RDM+ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGF 535
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D Y+ ++ ++ AE +F E ++K + D V+ LV ++ + G VEK +
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 152 VVESMKNAEL--NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
++M +A L N+ C S +++ F + A ++ + +++ G P TY +++
Sbjct: 596 WYQAMLHAGLLPNVPTCNS--LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y + DSL K+G L F M+ GI D +Y SL+ + + A+ L +
Sbjct: 178 IYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGM 237
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++ + D+ F L+ +++EG + E+ M + + ++NG
Sbjct: 238 MKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRL 297
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++ + ++GC P V Y S+IN +C+ A K+F EM QKG + Y+++
Sbjct: 298 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTL 357
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ +G G+ A + M +G PN+ YN L+
Sbjct: 358 IQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLL 393
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%)
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
R E + M E GI D +Y ++I S V A LF + E G+ D+ ++
Sbjct: 156 RIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYT 215
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
LV G ++ M ++ +++ F K A ++Y ++I
Sbjct: 216 SLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQM 275
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
P TY S+IN C G +A ++F M+ KG VVAY+S++ + K ++ DA
Sbjct: 276 SIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDA 335
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHG 281
M++ +M KG N Y +L+ G
Sbjct: 336 MKIFYEMSQKGLTGNTITYTTLIQGFG 362
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 16/258 (6%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+++AF K G L+ E ++ + P+ Y L + L GR E + F M+
Sbjct: 252 LIDAFVKEGKLLDAKELY--NEMIQMSIAPN-IFTYTSLINGLCMEGRLDEARQMFYLME 308
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
KG D Y SLI F +V+ A ++F E +KG+ + + L+ + G
Sbjct: 309 TKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPN 368
Query: 148 KTLEVVESM--KNAELNISD---CISCVIVNGFSKRRAYWAAVKVYEQLISQ---GCIPG 199
EV M + NI + C+ NG + A+ ++E + + G P
Sbjct: 369 VAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNK-----ALMIFEDMQKREIDGVPPN 423
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
TY +++ C G KA VF +MQ++ D ++ Y+ ++ K G+++DA+ L
Sbjct: 424 IRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFC 483
Query: 260 KMKPKGCEPNVWIYNSLM 277
+ KG +PNV Y +++
Sbjct: 484 SLPSKGVKPNVVTYTTMI 501
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 121/287 (42%), Gaps = 20/287 (6%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
ESR L PS ++L + + K + ++ + ++ G+ D L+ F
Sbjct: 64 ESRPL---PSIIDFTRLL-NVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQS 119
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ +A + + G D+ F L+ + +E+ + +V M + I
Sbjct: 120 SQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIY 179
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
I++ K A+ ++ Q+ + G P V Y S++N C G + A+ + M +
Sbjct: 180 TTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMK 239
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKN 285
+ V+ +++++ + K G++ DA L +M PN++ Y SL++ M GR
Sbjct: 240 RKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDE 299
Query: 286 LRQL-------------EKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
RQ+ YT++I+ + ++ + +K + E G
Sbjct: 300 ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKG 346
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 3/206 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K + + +K F +M +KG+ + Y +LI F + + VA+E+F
Sbjct: 319 YTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMV 378
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN-ISDCISC--VIVNGFSKRR 179
+G+ ++ + L+ G V K L + E M+ E++ + I V+++G
Sbjct: 379 SRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNG 438
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+ V+ + + G +TY II C+ G A +F + KG VV Y+
Sbjct: 439 KLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYT 498
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKG 265
+M++ + G + +A L KMK G
Sbjct: 499 TMISGLFREGLMLEAHVLFRKMKEDG 524
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 6/221 (2%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M++ G D Y ++ F K E +F E + L +T Y L G
Sbjct: 307 METKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLT---GNTITYTTLIQGFGL 363
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK---GMLRD 129
G+ + F M +G+ + Y L+ +V A +F++ +++ G+ +
Sbjct: 364 VGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPN 423
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ G +EK L V M+ +++I +I+ G K A+ ++
Sbjct: 424 IRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFC 483
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
L S+G P VTY ++I+ R GL +A +F +M++ G
Sbjct: 484 SLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 3/280 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KMK + D Y +++ F GDS+ V ++ + K D + Y + D+
Sbjct: 413 FWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIW---NAMKADGYNDNVVAYTAVIDA 469
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + GR FE L+ F +MK+KGI+ + Y SLI F A ELFK + G +
Sbjct: 470 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 529
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + Y + G K ++ E MK+ + ++ G +K A +V+
Sbjct: 530 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 589
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L + G P +TY +I + + +A K+F +M + V+A +S++ K G
Sbjct: 590 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 649
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
R +A R+ ++K EP YN+L+ GR ++++
Sbjct: 650 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEV 689
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 122/273 (44%), Gaps = 3/273 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+K KS G+ L +G Y ++ + LF E ++L P Y +L D++
Sbjct: 869 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF--AEMKELGCGPDE-FTYNLLLDAM 925
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GKS R E+LK +M KG Y ++I ++ A +L+ +G
Sbjct: 926 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 985
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ ++ G +E + M + I +++NG +++
Sbjct: 986 CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 1045
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ QG P +Y II+ C+ G + F ++ + G + ++ Y+ ++ GK+ R
Sbjct: 1046 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 1105
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ +A+ L +M+ KG PN++ YNSL+ G+A
Sbjct: 1106 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKA 1138
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 155/349 (44%), Gaps = 25/349 (7%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK AGIVL++ Y ++ K G + ++ +D S Y +L + GK
Sbjct: 276 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY---RVMMVDGVVPSVRTYSVLMVAFGK 332
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK---EAEEKGMLRD 129
+L R+M+ G+ P+VY+ IC + + K +E ++ + E +G D
Sbjct: 333 RRDVETVLWLLREMEAHGV--KPNVYSYTIC-IRVLGQAKRFDEAYRILAKMENEGCKPD 389
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + + G + +V MK ++ +++ F + ++++
Sbjct: 390 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN 449
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + G V Y ++I+A C++G +A ++F EM+QKG +Y+S+++ + K
Sbjct: 450 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 509
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-KNLRQLEKY---------------T 293
R DA+ L M G +PN + + ++ +G++ ++++ +++Y
Sbjct: 510 RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 569
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
V+ + M + ++E + G D +M+ SK S+ +E
Sbjct: 570 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDE 618
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MK G D Y +++A +G S ++ + E S+ Y +
Sbjct: 903 FAEMKELGCGPDEFTYNLLLDA---MGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISG 959
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KS R + + + ++ +G P Y L+ ++ AE LF E E G +
Sbjct: 960 LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 1019
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ L+ + G EK + + M + +N +I++ K + +
Sbjct: 1020 CTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFR 1079
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
QL+ G P +TY +I+ + +A +F EMQ+KG + Y+S++ GK G
Sbjct: 1080 QLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAG 1139
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ +A ++ ++ KG +PNV+ YN+L+
Sbjct: 1140 KAAEAGKMYEELLTKGWKPNVFTYNALI 1167
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 37/259 (14%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L L K +A E + + K G+ +Y SLIC + +AE LF E +E G
Sbjct: 851 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 910
Query: 126 MLRDLEVFLKLVLMYIEEGM-VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D E L+L + + M +E+ L+V E M + I++G K R A
Sbjct: 911 CGPD-EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 969
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ---------------- 228
+ +Y L+SQG P TY +++ + G AE +F EM +
Sbjct: 970 IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 1029
Query: 229 -------------------KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
+G + + +Y+ ++ K G++ D + ++ G EP+
Sbjct: 1030 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 1089
Query: 270 VWIYNSLMDMHGRAKNLRQ 288
+ YN L+D G++K L +
Sbjct: 1090 LITYNLLIDGLGKSKRLEE 1108
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y I+ K E+ L+ S+ TP + Y L D L K+GR + F
Sbjct: 953 YNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCT---YGPLLDGLLKAGRIEDAENLFN 1009
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M E G + ++Y L+ + LF++ ++G+ D++ + ++ + G
Sbjct: 1010 EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1069
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ L + L ++++G K + AV ++ ++ +G +P TY
Sbjct: 1070 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1129
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+I + G ++A K++ E+ KG+ V Y++++ Y +G A +M
Sbjct: 1130 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVG 1189
Query: 265 GCEPN 269
GC PN
Sbjct: 1190 GCLPN 1194
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/371 (19%), Positives = 143/371 (38%), Gaps = 57/371 (15%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y M G+V Y +M AF K D E V L E E+ + + + Y I
Sbjct: 305 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVK---PNVYSYTIC 361
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
LG++ R E + M+ +G D + LI + A+++F + ++
Sbjct: 362 IRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 421
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D ++ L+ + + G + +E+ +MK N + +++ + + A++
Sbjct: 422 KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE 481
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM-------------------- 226
+++++ +G +P Q +Y S+I+ + + + A ++F M
Sbjct: 482 MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYG 541
Query: 227 ---------------QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ KG VVA ++++ K+GR+ A R+ ++K G P+
Sbjct: 542 KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 601
Query: 272 IYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
YT +I + A +FD VK + + N V D ++
Sbjct: 602 T-------------------YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLI 642
Query: 332 GVFSKLSQIEE 342
K + +E
Sbjct: 643 DTLYKAGRGDE 653
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 137/345 (39%), Gaps = 26/345 (7%)
Query: 18 IVLDSGCYCQIMEAFYKIGDSEKVAAL----FLECESRKLDLTPSSTHMYKILCDSLGKS 73
++ D C I+ +F KIG ++ + FL+ S K D + + M IL K
Sbjct: 770 LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGS-KTDRSSCHSLMEGIL-----KK 823
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
+ ++F + GI D LI + A EL K+ + G+ ++
Sbjct: 824 AGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLY 883
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ ++E +++ + MK + ++++ K +KV E++
Sbjct: 884 NSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 943
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G VTY +II+ + +A ++ + +GF Y ++ K GRI D
Sbjct: 944 KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIED 1003
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVIS 297
A L +M GC+ N IYN L++ H A N + ++ YT +I
Sbjct: 1004 AENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 1063
Query: 298 AYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
A + + + ++ + G D +++ K ++EE
Sbjct: 1064 TLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 1108
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 19 VLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+L+ GC Y ++ G++EKV LF + + ++ S Y I+ D+L K
Sbjct: 1011 MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS---YTIIIDTLCK 1067
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G+ + L +FR + E G+ D Y LI ++ A LF E ++KG++ +L
Sbjct: 1068 AGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYT 1127
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+L + G + ++ E + + ++ G+S + +A Y ++I
Sbjct: 1128 YNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMI 1187
Query: 193 SQGCIP 198
GC+P
Sbjct: 1188 VGGCLP 1193
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 143/292 (48%), Gaps = 6/292 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+MKS G+ L Y ++ F KI DS+ LF E +++ L+ + +Y + +
Sbjct: 301 EEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTK---LSSLNGIIYSNIIHAH 357
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+SG + R+M+E GI VY S++ + I +F+ +E G +
Sbjct: 358 CQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSI 417
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +Y++ G V K L + + M++ + ++ +++NGF + A ++E+
Sbjct: 418 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEE 477
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G P + Y +I A+C++G +A + +MQ++ A+ ++ Y G
Sbjct: 478 MLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD 537
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
++ A+ + M+ GC P V YN+L +HG + ++++ +V+ ++A
Sbjct: 538 MKSALDTLDLMRRSGCVPTVMTYNAL--IHGLVRK-HKVQRAVSVLDKMSIA 586
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 151/369 (40%), Gaps = 41/369 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK----------------- 52
+E+M +G+ D Y ++EAF K+G+ ++ + + + +
Sbjct: 475 FEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAV 534
Query: 53 ----------LDLTPSS-----THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
LDL S Y L L + + + M GI +
Sbjct: 535 AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHT 594
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y ++ +A+ ++ A E F + +E G+ D+ ++ L+ + G ++ L V M
Sbjct: 595 YTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 654
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
++ + I ++++G+++R W A + +Q+ G P TY S INA C+ G
Sbjct: 655 FQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQ 714
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+AEKV EM G V Y++++ + + A++ +MK G +P+ Y+ L+
Sbjct: 715 RAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLV 774
Query: 278 DMHGRAKNLRQLEKYTTVISAYNMAREFDMCV---------KFYNEFRMNGGVIDRAMAG 328
+ + YT +IS E D+ V ++ ++ GG + A+
Sbjct: 775 TSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHWSRWLHKIERTGGALTEALQR 834
Query: 329 IMVGVFSKL 337
I ++ L
Sbjct: 835 IFPPDWNSL 843
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 131/309 (42%), Gaps = 32/309 (10%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECE----SRKLDLT 56
+SQS + +++ K+ L+ Y I+ A + G+ E+ L E E +D+
Sbjct: 326 NDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVY 385
Query: 57 PSSTHMYKILCD---------------------SLG-------KSGRAFEILKFFRDMKE 88
S H Y I+ + S G K G+ + L ++M+
Sbjct: 386 HSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMES 445
Query: 89 KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
GI + Y+ LI F + + A +F+E G+ D ++ L+ + + G +++
Sbjct: 446 CGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDR 505
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+ ++E M+ + S+ I+ G++ +A+ + + GC+P +TY ++I+
Sbjct: 506 AICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIH 565
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
R +A V +M G Y+ ++ Y +G I A K+K G +
Sbjct: 566 GLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKL 625
Query: 269 NVWIYNSLM 277
+V+IY +L+
Sbjct: 626 DVYIYETLL 634
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 11/259 (4%)
Query: 32 FYKIGDSEKVAALFLECESRKLDLT----PSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+ K GD A F +R ++ S H Y + D G L +MK
Sbjct: 252 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGA-------LSCVEEMK 304
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+G+ Y+ LI FA I + + A+ LFKEA+ K + ++ ++ + + G +E
Sbjct: 305 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 364
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ E+V M+ ++ + +++G++ + + V+E+L G P ++Y ++
Sbjct: 365 RAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL 424
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N Y +IG +KA + EM+ G YS ++ + +A + +M G +
Sbjct: 425 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQ 484
Query: 268 PNVWIYNSLMDMHGRAKNL 286
P+ IYN L++ + N+
Sbjct: 485 PDRAIYNLLIEAFCKMGNM 503
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 139/331 (41%), Gaps = 19/331 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+S GI ++ Y ++ F + D A+F E + L P +Y +L ++
Sbjct: 441 KEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM--LRSGLQPDRA-IYNLLIEAF 497
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G + M+++ + + +I +A ++K A + G + +
Sbjct: 498 CKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTV 557
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + + V++ + V++ M A + ++ +I+ G++ A + + +
Sbjct: 558 MTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK 617
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G Y +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 618 IKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGD 677
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
+ +A L+ +MK G PN+ Y S ++ +A ++++ EK YTT
Sbjct: 678 VWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTT 737
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
+I + D +K + E ++ G D A
Sbjct: 738 LIKGWARVSLPDRALKCFEEMKLAGLKPDEA 768
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 121/260 (46%), Gaps = 16/260 (6%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ +I +A + A F+ +G+ + VF LV Y + L VE MK
Sbjct: 245 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 304
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ L ++ ++++GF+K +A ++++ ++ + Y++II+A+C+ G
Sbjct: 305 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 364
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+AE++ EM++ G D + Y SM+ Y + + ++K G +P++ Y L+
Sbjct: 365 RAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL 424
Query: 278 DMHGR----AKNL---RQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
+++ + AK L +++E Y+ +I+ + +F + E +G
Sbjct: 425 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQ 484
Query: 322 IDRAMAGIMVGVFSKLSQIE 341
DRA+ +++ F K+ ++
Sbjct: 485 PDRAIYNLLIEAFCKMGNMD 504
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 38/240 (15%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + +KM AGI + Y IM + GD K F + + L L ++Y
Sbjct: 574 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKL---DVYIY 630
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ L + KSGR L R+M + I + +Y LI +A +V AE+L K+ +E
Sbjct: 631 ETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKE 690
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ ++ + + + G M+ AE
Sbjct: 691 DGVPPNIHTYTSYINACCKAG----------DMQRAE----------------------- 717
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
KV E+++ G P TY ++I + R+ L +A K F EM+ G +Y +V
Sbjct: 718 --KVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVT 775
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 119/253 (47%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ ++ A + GD + A LF E +L + Y +L L GRA + R
Sbjct: 156 FNPVLRAMLRAGDVKGAAKLF---EFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMR 212
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M+ +G++ Y +++ VK A ++ +E E G+ R+ V+ ++ + + G
Sbjct: 213 RMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSG 272
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ L+V E+M + + + + ++ G + A ++ ++I C P +TY
Sbjct: 273 EIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYG 332
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+I Y +IG S+A V+ EM G V+YS ++ GR++DAM + M +
Sbjct: 333 SMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDR 392
Query: 265 GCEPNVWIYNSLM 277
GC P+ Y S++
Sbjct: 393 GCAPDTIAYTSMI 405
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 10/263 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+M+ G+V Y +++ + G D+ KVA E + + + +Y +
Sbjct: 212 RRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVA------EEMERNGLARNEFVYSTVI 265
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
KSG LK + M + + +Y+++I A+ ++ AE LF+E +
Sbjct: 266 TGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCA 325
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ + ++ Y + G + L V E M A + +++NG A+ V
Sbjct: 326 PNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMV 385
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF-DKCVVAYSSMVAMYG 246
++ ++ +GC P + Y S+I C G+ ++F +M G D V++Y+ ++
Sbjct: 386 WKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLL 445
Query: 247 KTGRIRDAMRLVAKMKPKGCEPN 269
+ AM L+ +M +GC+P+
Sbjct: 446 LAKDLPRAMDLLNRMLDQGCDPD 468
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 113/269 (42%), Gaps = 4/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E + + D Y ++ A G + AL E + + + + + +
Sbjct: 107 HEIIPGWDLAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGV----VAAEAFNPVLRA 162
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ ++G K F M+ KG + + Y L+ A + + E +G++
Sbjct: 163 MLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPG 222
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + +V + G V+ +V E M+ L ++ + ++ GF K A+KV+E
Sbjct: 223 VMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWE 282
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ P V Y+++I G ++AE +F EM ++ Y SM+ Y K G
Sbjct: 283 AMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIG 342
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A+ + +M GC PN Y+ L++
Sbjct: 343 DTSRALSVWEEMIGAGCMPNAVSYSILIN 371
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 17/175 (9%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV + ++++ G + + + ++ A R G A K+F MQ KG Y+ +V
Sbjct: 138 AVALVHEMVADGVVAAE-AFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVH 196
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEK--------- 291
GR AM ++ +M+ +G P V Y +++D GR K+ ++ +
Sbjct: 197 GLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAR 256
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+TVI+ + + E D +K + + + + M+G + ++ E
Sbjct: 257 NEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTE 311
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 142/292 (48%), Gaps = 6/292 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+MKS G+ + Y ++ + K D+E LF E +++ +L + +Y + +
Sbjct: 312 EEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNL---NGIIYSNIIHAH 368
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+SG + R+M+E GI VY S++ + + K +F+ +E G +
Sbjct: 369 CQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSI 428
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +Y++ G V K L V + M++ + ++ +++NGF + A ++E
Sbjct: 429 ISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFED 488
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I G P + Y ++ A+C++G +A ++F M+++ + ++ + G
Sbjct: 489 MIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGD 548
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
++ A+ + M+ GC P V YN+L +HG + Q+E+ +V+ ++A
Sbjct: 549 MKRALDTLDLMRRSGCAPTVMTYNAL--IHGLIRK-HQVERAVSVLDKMSIA 597
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 153/376 (40%), Gaps = 47/376 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M +G+ D Y ++EAF K+G+ ++ +F E K + S ++ + +
Sbjct: 486 FEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIF---ERMKKERMQPSNRTFRPIIEG 542
Query: 70 LGKSG---RAFEILKFFR--------------------------------DMKEKGILED 94
+G RA + L R M GI +
Sbjct: 543 FAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPN 602
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y ++ +A+ ++ A E F + +E G+ D+ ++ L+ + G ++ L V
Sbjct: 603 EHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTR 662
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M ++ + I ++++G+++R W A + +Q+ G P T+ S INA C+ G
Sbjct: 663 EMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAG 722
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+AE V EM G V +++++ + K A++ +MK G +P+ Y+
Sbjct: 723 DMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYH 782
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV---------KFYNEFRMNGGVIDRA 325
L+ + + YT ++S E D+ V K+ +E GG + A
Sbjct: 783 CLVTSLLSRATVMEGSTYTGILSVCREMFENDLTVDLRTAVHWSKWLHEIERTGGALTEA 842
Query: 326 MAGIMVGVFSKLSQIE 341
+ I ++ +E
Sbjct: 843 LQRIFPPDWNSSENLE 858
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 9/269 (3%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF---LECESRKLDLTPSSTHMYKILCD 68
+M+ GI Y +M + D +K +F EC R S Y L +
Sbjct: 383 EMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFR------PSIISYGCLIN 436
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G+ + L ++M+ GI + Y+ LI F + + A +F++ + G+
Sbjct: 437 LYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQP 496
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D ++ LV + + G +++ + + E MK + S+ I+ GF+ A+
Sbjct: 497 DRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTL 556
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ + GC P +TY ++I+ R +A V +M G Y+ ++ Y +
Sbjct: 557 DLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAAS 616
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G I A K+K G + +V+IY +L+
Sbjct: 617 GDIGKAFEYFTKIKESGLKLDVYIYETLL 645
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 140/332 (42%), Gaps = 21/332 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+S GI ++ Y ++ F + D ++F + K L P +Y +L ++
Sbjct: 452 KEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDM--IKSGLQPDRA-IYNLLVEAF 508
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G ++ F MK++ + + +I FA ++K A + G +
Sbjct: 509 CKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTV 568
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ I + VE+ + V++ M A + ++ +I+ G++ A + + +
Sbjct: 569 MTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTK 628
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G Y +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 629 IKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGD 688
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQ----------LEKYT 293
+ +A L+ +MK G PN+ + S + DM RA+N+ Q ++ +T
Sbjct: 689 VWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQ-RAENVIQEMADVGLKPNVKTFT 747
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
T+I + D +K + E + G D A
Sbjct: 748 TLIKGWAKVSLPDRALKCFEEMKSAGLKPDEA 779
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 16/266 (6%)
Query: 28 IMEAFY-KIGDSEKVAALFLECESRKLDLTP----SSTHMYKILCDSLGKSGRAFEILKF 82
+M +Y K GD A F +R ++ S H Y + D G L
Sbjct: 258 LMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGA-------LSC 310
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE--VFLKLVLMY 140
+MK +G+ Y+ LI + + + A++LFKEA+ K L +L ++ ++ +
Sbjct: 311 VEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTK--LDNLNGIIYSNIIHAH 368
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G +++ E+V M+ ++ + +++G++ + + V+E+L G P
Sbjct: 369 CQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSI 428
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
++Y +IN Y +IG KA V EM+ G YS ++ + +A +
Sbjct: 429 ISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFED 488
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNL 286
M G +P+ IYN L++ + N+
Sbjct: 489 MIKSGLQPDRAIYNLLVEAFCKMGNM 514
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/279 (18%), Positives = 114/279 (40%), Gaps = 54/279 (19%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ ++ +A + A F+ +G+ + VF LV Y + L VE MK
Sbjct: 256 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 315
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ L ++ +++ G+ K +A K++++ ++ + Y++II+A+C+ G
Sbjct: 316 SEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMD 375
Query: 218 KAEKVFIEMQQKGFD--------------------KC---------------VVAYSSMV 242
+AE++ EM++ G D KC +++Y ++
Sbjct: 376 RAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLI 435
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+Y K G++ A+ + +M+ G + N + Y+ +I+ +
Sbjct: 436 NLYVKIGKVPKALAVSKEMESHGIKHNN-------------------KTYSMLINGFIHL 476
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+F + + +G DRA+ ++V F K+ ++
Sbjct: 477 HDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMD 515
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 149/341 (43%), Gaps = 43/341 (12%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
C+ ++E D K+ +F E + R L +T S+ + L S G G E+L +
Sbjct: 150 CHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANS---LIKSFGNLGLVEELLWVW 206
Query: 84 RDMKEKGILEDPSVYAS--LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
R MKE GI DPS+Y L+ + ++ AE++F+ + ++ D + ++ Y
Sbjct: 207 RRMKENGI--DPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC 264
Query: 142 EEGMVEKTLEVVESM--KN----------------AELNISDCIS--------------- 168
+ G ++K +E M KN +E + C+S
Sbjct: 265 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 324
Query: 169 --CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
+++ G K+R A V+E + +GC Y ++I++Y + G +A ++F M
Sbjct: 325 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM 384
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ +GF+ V YS +V K+GR+ D M L + KG N Y SL+D G+A +
Sbjct: 385 KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRI 444
Query: 287 RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
E +S AR+ C + G ID+A+A
Sbjct: 445 EDAENLFEEMSEKGCARD-SYCYNAIIDALAKHGKIDQALA 484
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 128/273 (46%), Gaps = 3/273 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + + M+ + D Y +++A Y D + +L+LE E R L++ P H Y
Sbjct: 270 QKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPP---HSY 326
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ L K + E F M +KG + ++Y +LI S++ ++ A LF+ +
Sbjct: 327 SLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKN 386
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G D + LV + G ++ +E+ + +N + I+ +++G K
Sbjct: 387 EGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIED 446
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++E++ +GC Y +II+A + G +A +F M+++G D+ V ++ ++
Sbjct: 447 AENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILID 506
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
K + +A++ KM KG P V + +L
Sbjct: 507 GLFKEHKNEEAIKFWDKMIDKGITPTVASFRAL 539
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 129/271 (47%), Gaps = 7/271 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMYKILCD 68
+E M IV D+ Y +++ + K G +K F + E + ++ P T+M I
Sbjct: 241 FEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMK--NVKPDKITYMTLI--- 295
Query: 69 SLGKSGRAFEI-LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
S R F+ L + +M+E+G+ P Y+ +I + A +F+ +KG
Sbjct: 296 QACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCR 355
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ ++ L+ Y + G +E+ + + E MKN V+VNG K +++
Sbjct: 356 ANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMEL 415
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ ++G + YAS+I+ + G AE +F EM +KG + Y++++ K
Sbjct: 416 FDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAK 475
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G+I A+ L +M+ +GC+ V+ + L+D
Sbjct: 476 HGKIDQALALFGRMEEEGCDQTVYTFTILID 506
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 126/276 (45%), Gaps = 4/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M G + Y +++++ K G E+ LF ++ + P + Y +L +
Sbjct: 346 FETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFE--PDAV-TYSVLVNG 402
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR + ++ F + KG+ + YASLI ++ AE LF+E EKG RD
Sbjct: 403 LCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARD 462
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + G +++ L + M+ + + ++++G K A+K ++
Sbjct: 463 SYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWD 522
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++I +G P ++ ++ C G ++A K+ ++ G A+ M+ K
Sbjct: 523 KMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIP-ETAFEDMINTLCKAQ 581
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
RI++A +L + +G E I L++ +A N
Sbjct: 582 RIKEACKLADGIVDRGREIPGRIRTVLINALRKAGN 617
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 3/280 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KMK + D Y +++ F GDS+ V ++ + K D + Y + D+
Sbjct: 288 FWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIW---NAMKADGYNDNVVAYTAVIDA 344
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + GR FE L+ F +MK+KGI+ + Y SLI F A ELFK + G +
Sbjct: 345 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 404
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + Y + G K ++ E MK+ + ++ G +K A +V+
Sbjct: 405 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 464
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L + G P +TY +I + + +A K+F +M + V+A +S++ K G
Sbjct: 465 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 524
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
R +A R+ ++K EP YN+L+ GR ++++
Sbjct: 525 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEV 564
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 122/273 (44%), Gaps = 3/273 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+K KS G+ L +G Y ++ + LF E ++L P Y +L D++
Sbjct: 744 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF--AEMKELGCGPDE-FTYNLLLDAM 800
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GKS R E+LK +M KG Y ++I ++ A +L+ +G
Sbjct: 801 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 860
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ ++ G +E + M + I +++NG +++
Sbjct: 861 CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 920
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ QG P +Y II+ C+ G + F ++ + G + ++ Y+ ++ GK+ R
Sbjct: 921 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 980
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ +A+ L +M+ KG PN++ YNSL+ G+A
Sbjct: 981 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKA 1013
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 155/349 (44%), Gaps = 25/349 (7%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK AGIVL++ Y ++ K G + ++ +D S Y +L + GK
Sbjct: 151 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY---RVMMVDGVVPSVRTYSVLMVAFGK 207
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK---EAEEKGMLRD 129
+L R+M+ G+ P+VY+ IC + + K +E ++ + E +G D
Sbjct: 208 RRDVETVLWLLREMEAHGV--KPNVYSYTIC-IRVLGQAKRFDEAYRILAKMENEGCKPD 264
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + + G + +V MK ++ +++ F + ++++
Sbjct: 265 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN 324
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + G V Y ++I+A C++G +A ++F EM+QKG +Y+S+++ + K
Sbjct: 325 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 384
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-KNLRQLEKY---------------T 293
R DA+ L M G +PN + + ++ +G++ ++++ +++Y
Sbjct: 385 RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 444
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
V+ + M + ++E + G D +M+ SK S+ +E
Sbjct: 445 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDE 493
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MK G D Y +++A +G S ++ + E S+ Y +
Sbjct: 778 FAEMKELGCGPDEFTYNLLLDA---MGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISG 834
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KS R + + + ++ +G P Y L+ ++ AE LF E E G +
Sbjct: 835 LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 894
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ L+ + G EK + + M + +N +I++ K + +
Sbjct: 895 CTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFR 954
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
QL+ G P +TY +I+ + +A +F EMQ+KG + Y+S++ GK G
Sbjct: 955 QLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAG 1014
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ +A ++ ++ KG +PNV+ YN+L+
Sbjct: 1015 KAAEAGKMYEELLTKGWKPNVFTYNALI 1042
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 37/259 (14%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L L K +A E + + K G+ +Y SLIC + +AE LF E +E G
Sbjct: 726 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 785
Query: 126 MLRDLEVFLKLVLMYIEEGM-VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D E L+L + + M +E+ L+V E M + I++G K R A
Sbjct: 786 CGPD-EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 844
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ---------------- 228
+ +Y L+SQG P TY +++ + G AE +F EM +
Sbjct: 845 IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 904
Query: 229 -------------------KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
+G + + +Y+ ++ K G++ D + ++ G EP+
Sbjct: 905 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 964
Query: 270 VWIYNSLMDMHGRAKNLRQ 288
+ YN L+D G++K L +
Sbjct: 965 LITYNLLIDGLGKSKRLEE 983
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 107/252 (42%), Gaps = 3/252 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y I+ K E+ L+ S+ TP + Y L D L K+GR + F
Sbjct: 828 YNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCT---YGPLLDGLLKAGRIEDAENLFN 884
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M E G + ++Y L+ + LF++ ++G+ D++ + ++ + G
Sbjct: 885 EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 944
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ L + L ++++G K + AV ++ ++ +G +P TY
Sbjct: 945 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1004
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+I + G ++A K++ E+ KG+ V Y++++ Y +G A +M
Sbjct: 1005 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVG 1064
Query: 265 GCEPNVWIYNSL 276
GC PN Y L
Sbjct: 1065 GCLPNSSTYMQL 1076
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/371 (19%), Positives = 143/371 (38%), Gaps = 57/371 (15%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y M G+V Y +M AF K D E V L E E+ + + + Y I
Sbjct: 180 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVK---PNVYSYTIC 236
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
LG++ R E + M+ +G D + LI + A+++F + ++
Sbjct: 237 IRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 296
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D ++ L+ + + G + +E+ +MK N + +++ + + A++
Sbjct: 297 KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE 356
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM-------------------- 226
+++++ +G +P Q +Y S+I+ + + + A ++F M
Sbjct: 357 MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYG 416
Query: 227 ---------------QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ KG VVA ++++ K+GR+ A R+ ++K G P+
Sbjct: 417 KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 476
Query: 272 IYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
YT +I + A +FD VK + + N V D ++
Sbjct: 477 T-------------------YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLI 517
Query: 332 GVFSKLSQIEE 342
K + +E
Sbjct: 518 DTLYKAGRGDE 528
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 19 VLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+L+ GC Y ++ G++EKV LF + + ++ S Y I+ D+L K
Sbjct: 886 MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS---YTIIIDTLCK 942
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G+ + L +FR + E G+ D Y LI ++ A LF E ++KG++ +L
Sbjct: 943 AGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYT 1002
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+L + G + ++ E + + ++ G+S + +A Y ++I
Sbjct: 1003 YNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMI 1062
Query: 193 SQGCIPGQVTYASIIN 208
GC+P TY + N
Sbjct: 1063 VGGCLPNSSTYMQLPN 1078
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 137/345 (39%), Gaps = 26/345 (7%)
Query: 18 IVLDSGCYCQIMEAFYKIGDSEKVAAL----FLECESRKLDLTPSSTHMYKILCDSLGKS 73
++ D C I+ +F KIG ++ + FL+ S K D + + M IL K
Sbjct: 645 LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGS-KTDRSSCHSLMEGIL-----KK 698
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
+ ++F + GI D LI + A EL K+ + G+ ++
Sbjct: 699 AGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLY 758
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ ++E +++ + MK + ++++ K +KV E++
Sbjct: 759 NSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 818
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G VTY +II+ + +A ++ + +GF Y ++ K GRI D
Sbjct: 819 KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIED 878
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVIS 297
A L +M GC+ N IYN L++ H A N + ++ YT +I
Sbjct: 879 AENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 938
Query: 298 AYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
A + + + ++ + G D +++ K ++EE
Sbjct: 939 TLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 983
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 133/322 (41%), Gaps = 3/322 (0%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L E M G+V Y +++ KI E +L +E +S + L H
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL---DNH 313
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y +L D L K A +M GI P +Y IC + ++ A+ LF
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G++ + + L+ Y E V + E++ MK + IS +V G
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + +++I+ GC P V Y ++I + + + A +V EM+++G + Y+S+
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ K R+ +A + +M G +PN + Y + + + A +KY + +
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 302 AREFDMCVKFYNEFRMNGGVID 323
+C NE+ G VI+
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIE 575
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 127/296 (42%), Gaps = 16/296 (5%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L + ++ R + ++ ++MKE+GI D Y SLI + + A E
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G+ + + + YIE + V+ M+ + + + ++N + K+
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A Y ++ QG + TY ++N + AE++F EM+ KG V +Y +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------- 291
+ + K G ++ A + +M +G PNV IYN L+ R+ + + ++
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
Y T+I Y + + + ++E ++ G V D + +V +L+ +E
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 139/295 (47%), Gaps = 23/295 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L + L K+ + + + FR+M+ KGI D Y LI F+ + ++ A +F E
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G+ ++ ++ L+ + G +EK E+++ M L+ + C I++G+ K
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++++ +G +P Y ++++ CR+ +A +F +KG +++++
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALI 773
Query: 243 AM---YGKTGRIRDAM-RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK 291
+GKT + + RL+ + +PN YN ++D + NL Q++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 292 ---------YTTVISAYN-MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
YT++++ Y+ M R +M ++E G D M +++ F K
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEM-FPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 13/299 (4%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q +++M G+ + Y ++ F + G+ EK L E + L P++
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH--PNAV- 698
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D KSG E + F +MK KG++ D VY +L+ + +V+ A +F
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-T 757
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN----ISDCISCVIVNGFSK 177
+KG F L+ + G E EV+ + + + +D ++++ K
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
AA +++ Q+ + +P +TY S++N Y ++G ++ VF E G + +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPK-----GCEPNVWIYNSLMDMHGRAKNLRQLEK 291
YS ++ + K G A+ LV +M K GC+ ++ +L+ + + EK
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 158/411 (38%), Gaps = 116/411 (28%)
Query: 43 ALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI 102
A+F+ S L+L P + K+L D+L + R ++ M E+ ++ D Y LI
Sbjct: 170 AVFVFSSSMGLELVPRLSRC-KVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLI 228
Query: 103 CSFASIAEVKVAEE-LFK-EAEEKGMLRDLEVFLKLVLMYIEEGMVE------------- 147
+ V++ ++ LFK E E + +++ LKL I +G+V
Sbjct: 229 IAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLC 288
Query: 148 --KTLEVVESM--------------------------KNAE-------------LNIS-- 164
K LE +S+ +NA+ +NI
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPY 348
Query: 165 --DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
DC CV+ SK A +++ +I+ G IP YAS+I YCR + ++
Sbjct: 349 MYDCCICVM----SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYEL 404
Query: 223 FIEMQQK-----------------------------------GFDKCVVAYSSMVAMYGK 247
+EM+++ G VV Y++++ + +
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
R DAMR++ +MK +G P+++ YNSL+ +AK + +
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y IS Y A EF K+ E R G + ++ + ++ + K ++ E
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 44/244 (18%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF------------------------ 45
+++MK G+V DS Y +++ ++ D E+ +F
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKF 779
Query: 46 ------LECESRKLD-----LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
E +R +D + Y I+ D L K G + F M+ ++
Sbjct: 780 GKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPT 839
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y SL+ + + +F EA G+ D ++ ++ +++EGM K L +V+
Sbjct: 840 VITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVD 899
Query: 155 SM--KNA-----ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
M KNA +L+IS C + +++GF+K A KV E ++ IP T +I
Sbjct: 900 QMFAKNAVDDGCKLSISTCRA--LLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Query: 208 NAYC 211
N C
Sbjct: 958 NESC 961
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 133/322 (41%), Gaps = 3/322 (0%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L E M G+V Y +++ KI E +L +E +S + L H
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL---DNH 313
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y +L D L K A +M GI P +Y IC + ++ A+ LF
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G++ + + L+ Y E V + E++ MK + IS +V G
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + +++I+ GC P V Y ++I + + + A +V EM+++G + Y+S+
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ K R+ +A + +M G +PN + Y + + + A +KY + +
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 302 AREFDMCVKFYNEFRMNGGVID 323
+C NE+ G VI+
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIE 575
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 127/296 (42%), Gaps = 16/296 (5%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L + ++ R + ++ ++MKE+GI D Y SLI + + A E
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G+ + + + YIE + V+ M+ + + + ++N + K+
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A Y ++ QG + TY ++N + AE++F EM+ KG V +Y +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------- 291
+ + K G ++ A + +M +G PNV IYN L+ R+ + + ++
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
Y T+I Y + + + ++E ++ G V D + +V +L+ +E
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 139/295 (47%), Gaps = 23/295 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L + L K+ + + + FR+M+ KGI D Y LI F+ + ++ A +F E
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G+ ++ ++ L+ + G +EK E+++ M L+ + C I++G+ K
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++++ +G +P Y ++++ CR+ +A +F +KG +++++
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALI 773
Query: 243 AM---YGKTGRIRDAM-RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK 291
+GKT + + RL+ + +PN YN ++D + NL Q++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 292 ---------YTTVISAYN-MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
YT++++ Y+ M R +M ++E G D M +++ F K
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEM-FPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 13/299 (4%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q +++M G+ + Y ++ F + G+ EK L E + L P++
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH--PNAV- 698
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D KSG E + F +MK KG++ D VY +L+ + +V+ A +F
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-T 757
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN----ISDCISCVIVNGFSK 177
+KG F L+ + G E EV+ + + + +D ++++ K
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
AA +++ Q+ + +P +TY S++N Y ++G ++ VF E G + +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPK-----GCEPNVWIYNSLMDMHGRAKNLRQLEK 291
YS ++ + K G A+ LV +M K GC+ ++ +L+ + + EK
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 158/411 (38%), Gaps = 116/411 (28%)
Query: 43 ALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI 102
A+F+ S L+L P + K+L D+L + R ++ M E+ ++ D Y LI
Sbjct: 170 AVFVFSSSMGLELVPRLSRC-KVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLI 228
Query: 103 CSFASIAEVKVAEE-LFK-EAEEKGMLRDLEVFLKLVLMYIEEGMVE------------- 147
+ V++ ++ LFK E E + +++ LKL I +G+V
Sbjct: 229 IAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLC 288
Query: 148 --KTLEVVESM--------------------------KNAE-------------LNIS-- 164
K LE +S+ +NA+ +NI
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPY 348
Query: 165 --DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
DC CV+ SK A +++ +I+ G IP YAS+I YCR + ++
Sbjct: 349 MYDCCICVM----SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYEL 404
Query: 223 FIEMQQK-----------------------------------GFDKCVVAYSSMVAMYGK 247
+EM+++ G VV Y++++ + +
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
R DAMR++ +MK +G P+++ YNSL+ +AK + +
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y IS Y A EF K+ E R G + ++ + ++ + K ++ E
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 44/244 (18%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF------------------------ 45
+++MK G+V DS Y +++ ++ D E+ +F
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKF 779
Query: 46 ------LECESRKLD-----LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
E +R +D + Y I+ D L K G + F M+ ++
Sbjct: 780 GKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPT 839
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y SL+ + + +F EA G+ D ++ ++ +++EGM K L +V+
Sbjct: 840 VITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVD 899
Query: 155 SM--KNA-----ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
M KNA +L+IS C + +++GF+K A KV E ++ IP T +I
Sbjct: 900 QMFAKNAVDDGCKLSISTCRA--LLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Query: 208 NAYC 211
N C
Sbjct: 958 NESC 961
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 143/316 (45%), Gaps = 20/316 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M +G++ D Y I+ F G K A +FL+ + D Y L D L K
Sbjct: 149 MVKSGVMPDCMTYNSIVHGFCSSG-QPKEAIVFLK--KMRSDGVEPDVVTYNSLMDYLCK 205
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+GR E K F M ++G+ + + Y +L+ +A+ + L G+ + V
Sbjct: 206 NGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 265
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F LV Y ++ VE+ + V M+ LN + ++ K A+ +EQ+I
Sbjct: 266 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 325
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G PG + Y S+I+ C + +AE++ +EM +G + ++S++ + K GR+
Sbjct: 326 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 385
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVI 296
++ +L M G +P++ Y++L+D + A + + K Y+T+I
Sbjct: 386 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLI 445
Query: 297 SAY-NMAREFDMCVKF 311
+ Y ++R D V F
Sbjct: 446 NGYCKISRMKDALVLF 461
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 119/257 (46%), Gaps = 5/257 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ F+K GD +K + + E +++ +P+ Y + +L K+ + ++
Sbjct: 91 YSTVINGFFKEGDLDKTYSTYNEMLDQRI--SPNVV-TYNSIIAALCKAQTVDKAMEVLT 147
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M + G++ D Y S++ F S + K A K+ G+ D+ + L+ + G
Sbjct: 148 TMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 207
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ ++ +SM L ++ G++ + A + + ++ G P ++
Sbjct: 208 RCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 267
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++ AY + +A VF +M+Q+G + V Y +++ + K+GR+ DAM +M +
Sbjct: 268 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 327
Query: 265 GCEPNVWIYNSLMDMHG 281
G P +YNSL +HG
Sbjct: 328 GLSPGNIVYNSL--IHG 342
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 4/248 (1%)
Query: 39 EKVA-ALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
EKV A+ + + R+ L P++ Y + L KSGR + + +F M ++G+ V
Sbjct: 277 EKVEEAMLVFSKMRQQGLNPNAV-TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 335
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y SLI + + + AEEL E ++G+ + F ++ + +EG V ++ ++ + M
Sbjct: 336 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 395
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ +++G+ A K+ ++S G P VTY+++IN YC+I
Sbjct: 396 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMK 455
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
A +F EM+ G ++ Y+ ++ +T R A L + G + + YN +
Sbjct: 456 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNII- 514
Query: 278 DMHGRAKN 285
+HG KN
Sbjct: 515 -LHGLCKN 521
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 98/219 (44%), Gaps = 16/219 (7%)
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ +EG ++KT M + ++ + I+ K + A++V ++ G +P
Sbjct: 98 FFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 157
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+TY SI++ +C G +A +M+ G + VV Y+S++ K GR +A ++
Sbjct: 158 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 217
Query: 260 KMKPKGCEPNVWIYNSLM----------DMHG----RAKNLRQLEKY--TTVISAYNMAR 303
M +G +P + Y +L+ +MHG +N Y + ++ AY
Sbjct: 218 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 277
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ + + +++ R G + G ++G+ K ++E+
Sbjct: 278 KVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 316
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 105/265 (39%), Gaps = 3/265 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y+E+M G+ + Y ++ E+ L LE R + L +T + + D
Sbjct: 320 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL---NTIFFNSIID 376
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
S K GR E K F M G+ D Y++LI + ++ A +L GM
Sbjct: 377 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 436
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ Y + ++ L + M+++ ++ +I+ G + R AA ++Y
Sbjct: 437 DCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 496
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ G TY I++ C+ L A ++F + ++ M+ K
Sbjct: 497 VGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKV 556
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIY 273
GR +A L G PN W Y
Sbjct: 557 GRNDEAKDLFVAFSSNGLVPNYWTY 581
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 116/232 (50%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y + +LG++ + I + +M + G + Y LI S+ + A +FK+
Sbjct: 350 HTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQ 409
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G D + L+ ++ + G ++ +++ + M+ A L+ VI+N K
Sbjct: 410 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGH 469
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AA +++ +++ QGC P VT+ +I + + Y A K++ +MQ GF V YS
Sbjct: 470 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 529
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
++ + G G + +A + A+M+ K P+ +Y L+D+ G+A N+ + ++
Sbjct: 530 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQW 581
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 110/264 (41%), Gaps = 20/264 (7%)
Query: 80 LKFFRDMK-EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
L FF +K + G D Y +++ + + L E + G + + +L+
Sbjct: 333 LGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIH 392
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
Y + + + V + M+ A C +++ +K A+ +Y+++ + G P
Sbjct: 393 SYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSP 452
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
TY+ IIN + G A ++F EM +G +V ++ M+A++ K A++L
Sbjct: 453 DTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLY 512
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMN 318
M+ G +P+ Y+ +M++ G L + E + E +
Sbjct: 513 RDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAE-------------------GVFAEMQRK 553
Query: 319 GGVIDRAMAGIMVGVFSKLSQIEE 342
V D + G++V ++ K +E+
Sbjct: 554 NWVPDEPVYGLLVDLWGKAGNVEK 577
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M++AG+ D+ Y I+ K G LF CE TP+ + I+ +
Sbjct: 442 YQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLF--CEMVGQGCTPNLV-TFNIMI-A 497
Query: 70 LGKSGRAFEI-LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L R +E LK +RDM+ G D Y+ ++ ++ AE +F E + K +
Sbjct: 498 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 557
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCVIVNGFSKRRAYWAAVK 186
D V+ LV ++ + G VEK + + M +A L N+ C S +++ F + A
Sbjct: 558 DEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNS--LLSTFLRVHRMSEAYN 615
Query: 187 VYEQLISQGCIPGQVTYASIIN 208
+ + +++ G P TY +++
Sbjct: 616 LLQSMLALGLHPSLQTYTLLLS 637
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N ++ L Y M++AG D Y +ME G E+ +F E + + + P
Sbjct: 504 NYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK--NWVPDEP- 560
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D GK+G + +++++M G+ + SL+ +F + + A L +
Sbjct: 561 VYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 620
Query: 122 EEKGMLRDLEVFLKLV 137
G+ L+ + L+
Sbjct: 621 LALGLHPSLQTYTLLL 636
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 19/313 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ + G+ + Y ++ ++G ++ L L E + TP Y + +
Sbjct: 677 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK--GYTPDVIS-YSTVVNG 733
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G ++ K MK KG+ + +Y S+I I ++ AEE F E +G+L D
Sbjct: 734 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 793
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V+ L+ + + G + + M + ++ I++GF + A K++
Sbjct: 794 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 853
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P VT+ +IN YC+ G A +V M Q G VV Y++++ K G
Sbjct: 854 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 913
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YT 293
+ A L+ +M G +PN++ YNS+++ ++ N+ + K YT
Sbjct: 914 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973
Query: 294 TVISAYNMAREFD 306
T++ AY + E D
Sbjct: 974 TLMDAYCKSGEMD 986
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 3/258 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
T +Y L D K G KFF +M + I D Y ++I F I ++ A +L
Sbjct: 792 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 851
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F E KG+ D F +L+ Y + G ++ V M A + + +++G K
Sbjct: 852 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 911
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+A ++ ++ G P TY SI+N C+ G +A K+ E + G + V
Sbjct: 912 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEKYTT 294
Y++++ Y K+G + A ++ +M KG +P + +N LM+ +HG ++ +L +
Sbjct: 972 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1031
Query: 295 VISAYNMAREFDMCVKFY 312
A F+ VK Y
Sbjct: 1032 AKGIAPNATTFNSLVKQY 1049
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 143/334 (42%), Gaps = 19/334 (5%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ +M S I D Y I+ F +IGD + LF E + L+ P S + L +
Sbjct: 816 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE--PDSV-TFTELIN 872
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K+G + + M + G + Y +LI ++ A EL E + G+
Sbjct: 873 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 932
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + +V + G +E+ +++V + A LN +++ + K A ++
Sbjct: 933 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 992
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++ +G P VT+ ++N +C G+ EK+ M KG ++S+V Y
Sbjct: 993 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 1052
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKY 292
++ A + M +G P+ Y +L+ H +A+N+++ + Y
Sbjct: 1053 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 1112
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
+ +I + ++F + +++ R G D+ +
Sbjct: 1113 SVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 1146
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 3/275 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M AG + Y +++ K GD + L E K+ L P+ Y + +
Sbjct: 887 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM--WKIGLQPN-IFTYNSIVNG 943
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSG E +K + + G+ D Y +L+ ++ E+ A+E+ KE KG+
Sbjct: 944 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 1003
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ + GM+E +++ M + + +V + R AA +Y+
Sbjct: 1004 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 1063
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ S+G P TY +++ +C+ +A +F EM+ KGF V YS ++ + K
Sbjct: 1064 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 1123
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+ +A + +M+ +G + I++ D + K
Sbjct: 1124 KFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 1158
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Query: 93 EDPSVYASLICSFASIAEVKVAEELFKEAE-----EKGMLRDLEVFLKLVLMYIEEGMVE 147
+D V SLI SF ++ V + + + K D VF + ++ G++
Sbjct: 576 KDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLR 635
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA-AVKVYEQLISQGCIPGQVTYASI 206
+ V E M N L +S V + SK A A+ V+ + G +Y +
Sbjct: 636 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 695
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+ C++G +A + + M+ KG+ V++YS++V Y + G + +L+ MK KG
Sbjct: 696 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 755
Query: 267 EPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVK 310
+PN +IY S++ + R L + E+ YTT+I + + K
Sbjct: 756 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 815
Query: 311 FYNE 314
F+ E
Sbjct: 816 FFYE 819
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 159/359 (44%), Gaps = 23/359 (6%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L ++KM++ G + + Y +++ + K+ K+ F S L +
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL---RKIDDGFKLLRSMALKGLEPNLI 276
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y ++ + L + GR E+ +M +G D Y +LI + A + E
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G+ + + L+ + G + + +E ++ M+ L ++ +V+GFS++
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +V ++ G P VTY ++IN +C G A V +M++KG VV+YS++
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE----------- 290
++ + ++ + +A+R+ +M KG +P+ Y+SL + G + R E
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL--IQGFCEQRRTKEACDLYEEMLRV 514
Query: 291 -------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I+AY M + + ++ +NE G + D +++ +K S+ E
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 132/303 (43%), Gaps = 40/303 (13%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G LD Y +++ + K G+ + AL + E + LTPS Y L S+
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQ--ALVMHAEMLRHGLTPSVI-TYTSLIHSMC 356
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G ++F M+ +G+ + Y +L+ F+ + A + +E + G +
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS----------------------- 168
+ L+ + G +E + V+E MK L+ D +S
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLS-PDVVSYSTVLSGFCRSYDVDEALRVKRE 475
Query: 169 -------------CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
++ GF ++R A +YE+++ G P + TY ++INAYC G
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
KA ++ EM +KG VV YS ++ K R R+A RL+ K+ + P+ Y++
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 276 LMD 278
L++
Sbjct: 596 LIE 598
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 105/218 (48%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL +G L F M+ KG L + Y +LI + + ++ +L +
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ +L + ++ EG +++ V+ M ++ + ++ G+ K +
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ ++ +++ G P +TY S+I++ C+ G ++A + +M+ +G Y+++V
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ + G + +A R++ +M G P+V YN+L++ H
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++ GF A+ +++++ ++GC+P VTY ++I+ YC++ K+ M K
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ- 288
G + +++Y+ ++ + GR+++ ++ +M +G + YN+L+ + + N Q
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 289 ---------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
+ YT++I + A + ++F ++ R+ G + +V
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 334 FSKLSQIEE 342
FS+ + E
Sbjct: 390 FSQKGYMNE 398
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 27/276 (9%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E MK G+ D Y ++ F + D ++ AL ++ E + + P T Y L
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDE--ALRVKREMVEKGIKPD-TITYSSLIQGF 495
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ R E + +M G+ D Y +LI ++ +++ A +L E EKG+L D+
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 131 EVF------------------LKLVLMYIEEGMVEKTLE-VVESMKNAELNISDCISCVI 171
+ L L L Y E + T ++E+ N E +S +
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF--KSVVS--L 611
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ GF + A +V+E ++ + P Y +I+ +CR G KA ++ EM + GF
Sbjct: 612 IKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
V ++V K G++ + ++ + + CE
Sbjct: 672 LLHTVTVIALVKALHKEGKVNELNSVIVHVL-RSCE 706
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
SKR +A V+++++ P TY +I +C G A +F +M+ KG V
Sbjct: 182 SKRNISFAE-NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNV 240
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y++++ Y K +I D +L+ M KG EPN+ YN +++
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 125/271 (46%), Gaps = 16/271 (5%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
++ D+ K+G FE++K + MKE G L + +Y S+I + E + E E
Sbjct: 699 LMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERA 758
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G DL + L+LMY G +KT+EV S+ A L ++ ++ +S+
Sbjct: 759 GFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEG 818
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ +G P +Y S++ A + L+ +AE++F E++ KG+ Y ++ +
Sbjct: 819 FTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKI 878
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------- 291
Y A +L+A MK G EP + + LM +G A + + EK
Sbjct: 879 YRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVS 938
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y+TV +AY ++++ + E + +G
Sbjct: 939 TLPYSTVFNAYLKNGDYNLGITKLLEMKADG 969
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 158/349 (45%), Gaps = 35/349 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M+ GI Y ++ A+ K+G E L E + L S+ + I
Sbjct: 542 FSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMI---- 597
Query: 70 LGKSGRAFEILKFFRDMKE--KGILEDPSV----YASLICSFASIAEVKVAEELFKEAEE 123
A+ +K ++ + KG+ ++PS+ + +LI ++A + A +F E
Sbjct: 598 -----EAYGKIKLWQHAENFVKGLKQEPSIDRRIWNALIHAYAESGLYEHARAVFDIMIE 652
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG L ++ ++ I +G +++ +V+ +++ IS ++++ F+K +
Sbjct: 653 KGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFE 712
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+K+Y + G +P Y S+I+ CR Y E + +EM++ GF+ + ++++
Sbjct: 713 VMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLL 772
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR---------------- 287
MY G + + + G EPN YN+L+ M+ R NLR
Sbjct: 773 MYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSR--NLRPEEGFTLLNEMGKKGL 830
Query: 288 --QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
+LE Y ++++A A+ ++ + + E R G ++R++ +++ ++
Sbjct: 831 TPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIY 879
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 140/333 (42%), Gaps = 20/333 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M+ + D + ++ A K G +A L E R++ L P Y L +
Sbjct: 87 DAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLLEVRQVGLRPDVI-TYNTLISAC 145
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ + + F +M D Y +++ + + AE +F+E EKG D
Sbjct: 146 SQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDA 205
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + +EG + V E + A +++ + K A+ +Y++
Sbjct: 206 VTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDE 265
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + GC P VTY +I++ ++ S A KV EM G +V +S+++ Y K GR
Sbjct: 266 MRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGGR 325
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVK 310
+A+R + M G +P+ Y ++D+ R+ ++R+L +
Sbjct: 326 REEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKL-------------------MA 366
Query: 311 FYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
Y +G D A+ +M+ +K ++ +E+
Sbjct: 367 LYQTMMNDGYRPDNALYQVMLAALAKGNEYDEI 399
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + G+ G+A + + FR++ EKG D Y SL+ +FA + E + +E
Sbjct: 173 YNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELV 232
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G +D + ++ MY + G ++ L + + M+ V+++ K
Sbjct: 233 RAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRIS 292
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A KV E++ G P VT++++I AY + G +A + F M G +AY M+
Sbjct: 293 DAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVML 352
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ ++G +R M L M G P+ +Y ++ + ++E
Sbjct: 353 DIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIE 400
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 157/391 (40%), Gaps = 67/391 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M ++G+ D Y +++ + GD K+ AL+ ++ D +Y+++ +
Sbjct: 333 FSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALY---QTMMNDGYRPDNALYQVMLAA 389
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K EI +DM E +P + +S++ I++ +L K+A +G D
Sbjct: 390 LAKGNEYDEIEAVVQDM-EVVCQMNPQLVSSILIKAECISQ---GAKLLKKACLQGHEPD 445
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK--- 186
+ L ++ Y G E+ L +++ ++ + + IS + K + AA++
Sbjct: 446 SKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISECSIMLLCKNQKIAAAMQEYS 505
Query: 187 ---------------VYEQLI------------SQ--------GCIPGQVTYASIINAYC 211
+YE LI SQ G P + Y S+I+AYC
Sbjct: 506 SMQMLKCGSFGQDCNLYEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISAYC 565
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYS-SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
++G A ++ E Q G +++ +M+ YGK + A V +K EP++
Sbjct: 566 KLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQ---EPSI 622
Query: 271 --WIYNSLMDM--------HGRAKNLRQLEK--YTTVISAYNMAR------EFDMCVKFY 312
I+N+L+ H RA +EK T+ S M R D
Sbjct: 623 DRRIWNALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIV 682
Query: 313 NEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
E + G I ++ +M+ F+K I E+
Sbjct: 683 QELQDMGFKISKSTVILMLDAFTKAGDIFEV 713
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 132/275 (48%), Gaps = 6/275 (2%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L E+MKSAG D+ + I+ A GD + R + P+ Y
Sbjct: 129 HAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHL-----RSMGCDPNVV-TY 182
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + ++ + E +K +M+E+G + Y L+ + ++ V A+++ K+ E
Sbjct: 183 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 242
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G ++ F LV + + G V+ +++ M + + +++G K + +
Sbjct: 243 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 302
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +V E++ ++G P TY+++I+ C+ +AE++ M G VV YSS++
Sbjct: 303 AKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 362
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ K+G++ +A + + +M+ + P+V YN+++D
Sbjct: 363 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVID 397
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 124/266 (46%), Gaps = 39/266 (14%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L KS + E + +MK +G+ D Y++LI +++ AE++ +
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMV---EKTLE---------------------------- 151
G D+ V+ ++ + + G + +KTL+
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406
Query: 152 ----VVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
++E M+ + + D ++ ++NG K A K+ +++ GC P VTY +I
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 466
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+ C+ G +AE + M++ G VV Y+++++ K ++ +A R++ +M+ GC
Sbjct: 467 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 526
Query: 267 EPNVWIYNSLMD---MHGRAKNLRQL 289
PN+ YN++++ + GR K +QL
Sbjct: 527 PPNLVTYNTMVNGLCVSGRIKEAQQL 552
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 138/298 (46%), Gaps = 22/298 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL---DLTPSSTHMYKILC 67
E+MK+ G+ D+ Y ++ K E+ + R++ TP +Y +
Sbjct: 308 EEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQML-----RRMAGSGCTPDVV-VYSSII 361
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI---CSFASIAEVKVAEELFKEAEEK 124
+ KSG+ E K ++M+++ D Y ++I C IAE +V E +E+ +
Sbjct: 362 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGD- 420
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+L D+ + ++ + M+ + ++++ M A N I++G K A
Sbjct: 421 -VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ + + GC P VTY ++I+ C+ +AE+V EM+ G +V Y++MV
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539
Query: 245 YGKTGRIRDAMRLVAKMKP--KGCEPNVWIY----NSLM--DMHGRAKNLRQLEKYTT 294
+GRI++A +LV +MK C P+ Y N+LM D+ A+ L + K TT
Sbjct: 540 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKSTT 597
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 34/265 (12%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILE----------------------------- 93
Y I+ +G L+ +MK G
Sbjct: 115 YNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG 174
Query: 94 -DPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
DP+V Y +LI +FA +++ A +L +E E+G +L + LV + MV
Sbjct: 175 CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQ 234
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
+VV+ M + +V+GF KR A K+ ++++G P VTY+++I+
Sbjct: 235 DVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 294
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
C+ + +A++V EM+ +G YS+++ K +I +A +++ +M GC P+V
Sbjct: 295 CKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDV 354
Query: 271 WIYNSLMDMHGRAKNLRQLEKYTTV 295
+Y+S+ +H K+ + LE T+
Sbjct: 355 VVYSSI--IHAFCKSGKLLEAQKTL 377
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G + LE++E MK+A I+ + A+ + L S GC P
Sbjct: 122 FCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPN 178
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY ++I A+ R +A K+ EM+++G +V Y+ +V K + A +V
Sbjct: 179 VVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 238
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
KM G PNV +NSL+D + N+ K ++ A M
Sbjct: 239 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGM 280
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 47/174 (27%)
Query: 152 VVESMKNAELNISDC-ISCVIVNGFSKRRAYWAAV--------------KVYEQLISQGC 196
VV S+K+A+L ++ + + GFS W ++ ++ + C
Sbjct: 49 VVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASC 108
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF------------------------- 231
P +Y +I+ +C G A ++ EM+ GF
Sbjct: 109 EPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD 168
Query: 232 -------DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
D VV Y++++A + + ++ +AM+L+ +M+ +GC PN+ YN L+D
Sbjct: 169 HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVD 222
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 152/327 (46%), Gaps = 21/327 (6%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S L +++M G+V D CY +++ F+K GD + ++ E + + P+ Y
Sbjct: 202 SALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIW-ERLVKGSCVYPNVV-TYN 259
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
++ + L K GR E L+ + MK+ D Y+SLIC + V A E++KE ++
Sbjct: 260 VMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKR 319
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWA 183
++ D+ + L+ + G ++++ E+ M + N + +S + + G + R
Sbjct: 320 SVVVDVVTYNALLNGFCRAGKIKESFELWVMM--GKENCHNVVSYNIFIRGLFENRKVEE 377
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ V+E L +G TY +I+ C+ G +KA K+ E + G AYSS+V
Sbjct: 378 AISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVD 437
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLE------ 290
K GR+ +A+ +V +M GCE + + N L++ RA L R++E
Sbjct: 438 GLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSP 497
Query: 291 ---KYTTVISAYNMAREFDMCVKFYNE 314
Y T+I+ A F F E
Sbjct: 498 TVVSYNTLINGLCKAERFSDAYSFVKE 524
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 105/219 (47%), Gaps = 2/219 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I L ++ + E + + ++ +G D + Y LI + A ++ KEA+
Sbjct: 362 YNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAK 421
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G D + +V ++G V++ L +V M +S + ++NGF +
Sbjct: 422 DGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLE 481
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + ++ ++GC P V+Y ++IN C+ +S A EM +K + ++ YS ++
Sbjct: 482 EAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLM 541
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ +I A+ L ++ KG EP+V ++N L MHG
Sbjct: 542 DGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNIL--MHG 578
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 104/263 (39%), Gaps = 3/263 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ K G LD+ Y I++ K G ++ + + + +L+P H+ L
Sbjct: 414 LKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSP---HVCNPL 470
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ ++ + E + FFR+M+ KG Y +LI A KE EK
Sbjct: 471 INGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDW 530
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ + ++ L + + L + ++++G A+
Sbjct: 531 KPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALL 590
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+Y + C+P VT+ ++++ + A ++ M + GF +++Y+ +
Sbjct: 591 LYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLC 650
Query: 247 KTGRIRDAMRLVAKMKPKGCEPN 269
GRI D + L G P
Sbjct: 651 SCGRISDGIALFDDALKNGILPT 673
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 78/169 (46%), Gaps = 2/169 (1%)
Query: 112 KVAEELFKEA-EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
K A LF A + G +FL ++ + +V +VE +K + ++ +
Sbjct: 24 KSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVLT 83
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++ ++K + A+ ++++ GC PG +Y +++NA+ L KAE +
Sbjct: 84 VLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETV 143
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G + Y+ ++ + K + +A L+ M K +P+V+ Y ++++
Sbjct: 144 GILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVIN 192
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 3/243 (1%)
Query: 38 SEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
S K A + SR+ T S H++ ++ L + + +K + V
Sbjct: 22 SPKSALALFDSASRQPGYT-HSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTEDV 80
Query: 98 YASLICSFASIAEVKVAEELFKEAEEK-GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
+++ ++A A + F++ EE G + + L+ +IE ++EK +
Sbjct: 81 VLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYF 140
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ + + +++ K+R + A + + + S+ P +Y ++IN + G
Sbjct: 141 ETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDL 200
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC-EPNVWIYNS 275
A +VF EM ++G V+ Y+ M+ + K G + ++ C PNV YN
Sbjct: 201 VSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNV 260
Query: 276 LMD 278
+++
Sbjct: 261 MIN 263
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 137/307 (44%), Gaps = 13/307 (4%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S + +MK G+ + Y ++ F+K D+ +LF E + Y
Sbjct: 215 SAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLF---EEMRHQYCRPDVFTYT 271
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L LGK+GR E FF +M+ +G D ++I + A +LF+E E
Sbjct: 272 ELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETL 331
Query: 125 GMLRDLEVFLKLVLMYIE-EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + + ++ E + + E MK + ++ S ++++GF K
Sbjct: 332 RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEK 391
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ + E++ +G P Y S+I+A + Y A ++F E+++ Y+ M+
Sbjct: 392 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIK 451
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-------KNLRQLEKYTTV- 295
GK GR+ DA+ + +M GC P+V+ YN+LM R +R+++++ +
Sbjct: 452 HLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 511
Query: 296 -ISAYNM 301
I++YN+
Sbjct: 512 DINSYNI 518
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 125/308 (40%), Gaps = 22/308 (7%)
Query: 36 GDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDP 95
G EKV L+ E + + T Y L + K GR ++ +MKE G+
Sbjct: 175 GQYEKVHQLYNEMSTEGHCFPDTVT--YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTT 232
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
+Y LI F + A LF+E + D+ + +L+ + G +++
Sbjct: 233 KIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCE 292
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA-YCRIG 214
M+ ++N K A+K+++++ + CIP VTY +II A +
Sbjct: 293 MQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKS 352
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
S+ F M++ G YS ++ + KT R+ AM L+ +M KG P Y
Sbjct: 353 RASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYC 412
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
SL+D G+ A+ +D+ + + E + N G + +M+
Sbjct: 413 SLIDALGK-------------------AKRYDLACELFQELKENCGSSSARVYAVMIKHL 453
Query: 335 SKLSQIEE 342
K ++++
Sbjct: 454 GKAGRLDD 461
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM-LR 128
LG + + + F +K + Y S+I + + +L+ E +G
Sbjct: 136 LGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFP 195
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ + + G + ++++ MK + + I +++ F K A+ ++
Sbjct: 196 DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLF 255
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ Q C P TY +I + G +A F EMQ++G V ++M+ GK
Sbjct: 256 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKA 315
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ DAM+L +M+ C P+V YN+++
Sbjct: 316 GRLDDAMKLFQEMETLRCIPSVVTYNTII 344
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 2/270 (0%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H++ +M+ G D+ ++ K G + LF E E+ L PS I+
Sbjct: 288 HFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMET--LRCIPSVVTYNTIIK 345
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
RA E+ +F MKE GI Y+ LI F ++ A L +E +EKG
Sbjct: 346 ALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFP 405
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ L+ + + E+ + +K + S + V++ K A+ +
Sbjct: 406 PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINM 465
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++++ GC P Y ++++ R G+ +A MQ+ G + +Y+ ++ K
Sbjct: 466 FDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAK 525
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
TG AM +++ MK P+V YN+++
Sbjct: 526 TGGPHRAMEMLSNMKQSTVRPDVVSYNTVL 555
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 108/236 (45%), Gaps = 11/236 (4%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
++PSS Y IL D K+ R + + +M EKG P+ Y SLI + +A
Sbjct: 369 ISPSS-FTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 427
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV---- 170
ELF+E +E V+ ++ + G ++ + + + E+N C V
Sbjct: 428 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFD-----EMNKLGCAPDVYAYN 482
Query: 171 -IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++G ++ A+ ++ GCIP +Y I+N + G +A ++ M+Q
Sbjct: 483 ALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 542
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
VV+Y++++ G +A +L+ +M G E ++ Y+S+++ G+ +
Sbjct: 543 TVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 598
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 93/237 (39%), Gaps = 38/237 (16%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M G YC +++A K + LF E K + SS +Y ++ L
Sbjct: 397 EEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL---KENCGSSSARVYAVMIKHL 453
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK+GR + + F +M + G D Y +L+ A + A + +E G + D+
Sbjct: 454 GKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDI 513
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +I+NG +K A+++
Sbjct: 514 NSY-----------------------------------NIILNGLAKTGGPHRAMEMLSN 538
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ P V+Y +++ A G++ +A K+ EM GF+ ++ YSS++ GK
Sbjct: 539 MKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 595
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 103/231 (44%), Gaps = 4/231 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGI-LEDPSVYASLICSFASIAEVKVAEE 116
+ST+M I C L + E+ K ++M I + P+ + ++ + V+ A
Sbjct: 90 TSTYMALIHC--LEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAIT 147
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGF 175
+F + + + + + +++M + EG EK ++ M D ++ +++ F
Sbjct: 148 IFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAF 207
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K +A+++ ++ G P Y +I + + A +F EM+ + V
Sbjct: 208 CKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDV 267
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
Y+ ++ GK GRI +A +M+ +GC P+ N++++ G+A L
Sbjct: 268 FTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRL 318
>gi|357491817|ref|XP_003616196.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517531|gb|AES99154.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 981
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 156/381 (40%), Gaps = 51/381 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M +G+ +D+ + ++ G+ + +L + E R + S+T Y I
Sbjct: 316 FADMMKSGVAMDTCTFNTLIFISGSHGNLLEAESLLDKMEERGIS---SNTRTYNIFLSL 372
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+G L ++R ++E G+ D Y +L+ + + V+ E + E E+ + D
Sbjct: 373 YATAGSIDAALSYYRRIREVGLFPDTVTYRALLGALCTENMVQAVEGVIDEMEKNSVSLD 432
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI---------------------- 167
+V MYI EG V+K ++++ I I
Sbjct: 433 ALSLSGIVKMYINEGDVDKANDLLQKYGEPPSFICAAIIDAFAEKGFWAEAENIFYRKRD 492
Query: 168 ----------SCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
V++ + K Y AV ++E++ QG P TY SII L
Sbjct: 493 KARQARDILEFNVMIKAYGKANHYDKAVLLFEEMKYQGISPADSTYNSIIQMLSGADLVD 552
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A + +EMQ+ GF +S+++ Y + G++ DA+ + +M G +PN +Y +L+
Sbjct: 553 QARDLTVEMQEMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEMISAGVKPNETVYGALI 612
Query: 278 D---MHGRAKNLRQ-------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
+ HGR Q L TT++ +Y+ A + Y + + GV
Sbjct: 613 NGFAEHGRLDEALQYFHLMQESGLSANLVVLTTLMKSYSKAGDLKGVKSIYKQMQNMEGV 672
Query: 322 IDRAMAGIMVGVFSKLSQIEE 342
+D A M+ F++L + E
Sbjct: 673 LDLAARSSMITAFAELGLVSE 693
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 105/282 (37%), Gaps = 56/282 (19%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L P + Y L D GK+GR + F DM + G+ D + +LI S + A
Sbjct: 288 LKPRLSTTYNTLIDLYGKAGRLKDAADVFADMMKSGVAMDTCTFNTLIFISGSHGNLLEA 347
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
E L + EE+G+ + + + +Y G ++
Sbjct: 348 ESLLDKMEERGISSNTRTYNIFLSLYATAGSID--------------------------- 380
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
AA+ Y ++ G P VTY +++ A C + E V EM++
Sbjct: 381 --------AALSYYRRIREVGLFPDTVTYRALLGALCTENMVQAVEGVIDEMEKNSVSLD 432
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------------- 281
++ S +V MY G + A L+ K EP +I +++D
Sbjct: 433 ALSLSGIVKMYINEGDVDKANDLLQKYG----EPPSFICAAIIDAFAEKGFWAEAENIFY 488
Query: 282 ----RAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
+A+ R + ++ +I AY A +D V + E + G
Sbjct: 489 RKRDKARQARDILEFNVMIKAYGKANHYDKAVLLFEEMKYQG 530
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 110/264 (41%), Gaps = 21/264 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ ++ + GK+ + + F +MK +GI S Y S+I + V A +L E +
Sbjct: 503 FNVMIKAYGKANHYDKAVLLFEEMKYQGISPADSTYNSIIQMLSGADLVDQARDLTVEMQ 562
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G + F ++ Y G + + V + M +A + ++ + ++NGF++
Sbjct: 563 EMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEMISAGVKPNETVYGALINGFAEHGRLD 622
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ + + G V +++ +Y + G + ++ +MQ + A SSM+
Sbjct: 623 EALQYFHLMQESGLSANLVVLTTLMKSYSKAGDLKGVKSIYKQMQNMEGVLDLAARSSMI 682
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPN------VWIYNSL------------MDMHGRAK 284
+ + G + +A K K G + +++Y + M + G
Sbjct: 683 TAFAELGLVSEAKLTFEKFKETGQADSTSYGIMMYVYKDIGMIDEAIKIAEEMKISGL-- 740
Query: 285 NLRQLEKYTTVISAYNMAREFDMC 308
LR Y V++ Y + R+F C
Sbjct: 741 -LRDCVSYNRVLTCYAINRQFHKC 763
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 143/325 (44%), Gaps = 58/325 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M SAG+ + Y ++ F + G ++ F + L ++ + L S
Sbjct: 593 YQEMISAGVKPNETVYGALINGFAEHGRLDEALQYFHLMQESGLS---ANLVVLTTLMKS 649
Query: 70 LGKSGRAFEILKFFRDMKE-KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K+G + ++ M+ +G+L D + +S+I +FA + V A+ F++ +E G
Sbjct: 650 YSKAGDLKGVKSIYKQMQNMEGVL-DLAARSSMITAFAELGLVSEAKLTFEKFKETGQ-A 707
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS------CVIVNGFSKRRAYW 182
D + ++ +Y + GM+++ +++ E MK + L + DC+S C +N R+ +
Sbjct: 708 DSTSYGIMMYVYKDIGMIDEAIKIAEEMKISGL-LRDCVSYNRVLTCYAIN----RQFHK 762
Query: 183 AAVKVYEQLISQGCIP------------------------------------GQVTYASI 206
+YE ++S+ +P Q TY ++
Sbjct: 763 CGELLYEMIVSKKLLPDDGTLIVLFTILKKAEFPVEAAEQLELCYQEGKPYASQATYTAL 822
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
Y +G+++ A K F + + D AY+ + Y G + A+ + KM+ K
Sbjct: 823 ---YSLLGMHTLALK-FAQTVLENLDSSA-AYNVAIYAYASAGDVEKALNIHMKMRDKHV 877
Query: 267 EPNVWIYNSLMDMHGRAKNLRQLEK 291
EP++ Y +L+ +G+A + ++K
Sbjct: 878 EPDIVTYINLVGCYGKAGMVEGVKK 902
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 113/279 (40%), Gaps = 40/279 (14%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK--LDLTPSSTHMYK 64
L Y+ M+ +G+ + +M+++ K GD + V +++ + ++ + LDL S+
Sbjct: 625 LQYFHLMQESGLSANLVVLTTLMKSYSKAGDLKGVKSIYKQMQNMEGVLDLAARSS---- 680
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ + + G E F KE G D + Y ++ + I + A ++ +E +
Sbjct: 681 -MITAFAELGLVSEAKLTFEKFKETG-QADSTSYGIMMYVYKDIGMIDEAIKIAEEMKIS 738
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+LRD + +++ Y K E++ M ++ + D + +++ K+ +
Sbjct: 739 GLLRDCVSYNRVLTCYAINRQFHKCGELLYEMIVSKKLLPDDGTLIVLFTILKKAEFPVE 798
Query: 185 VKVYEQLISQGCIP--GQVTYASI------------------------------INAYCR 212
+L Q P Q TY ++ I AY
Sbjct: 799 AAEQLELCYQEGKPYASQATYTALYSLLGMHTLALKFAQTVLENLDSSAAYNVAIYAYAS 858
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
G KA + ++M+ K + +V Y ++V YGK G +
Sbjct: 859 AGDVEKALNIHMKMRDKHVEPDIVTYINLVGCYGKAGMV 897
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 3/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+Y ++ AG L+ + +M F K G+ +F E R L T S + L +
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVS---FNTLIN 283
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G E + M++ D Y++LI + ++ A LF E ++G++
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIP 343
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ +F L+ + G ++ E + M + L + +VNGF K AA +
Sbjct: 344 NDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ +I +G P ++TY ++I+ +CR G A ++ EM Q G + V +S++V K
Sbjct: 404 DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR+ DA R + +M G +P+ Y +MD
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 6/278 (2%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H EK ++ V Y ++ A K + LF E R L P+ ++ L
Sbjct: 299 HQMEKSRTRPDVF---TYSALINALCKENKMDGAHGLFDEMCKRGL--IPNDV-IFTTLI 352
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++G + + ++ M KG+ D +Y +L+ F ++ A + +G+
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D + L+ + G VE LE+ + M + + +V G K A +
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERA 472
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++ G P VTY +++A+C+ G K+ EMQ G VV Y+ ++ K
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCK 532
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
G++++A L+ M G P+ YN+L++ H R N
Sbjct: 533 LGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 95/213 (44%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L D + K I F+ ++ + G + V+ L+ F + A+++F E ++
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ + F L+ Y + G +++ + M+ + ++N K A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+++++ +G IP V + ++I+ + R G ++ + +M KG +V Y+++V +
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G + A +V M +G P+ Y +L+D
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLID 423
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 104/233 (44%), Gaps = 6/233 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+KM S G+ D Y ++ F K GD VAA + + L P Y L D
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGD--LVAARNIVDGMIRRGLRPDKI-TYTTLIDG 424
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G L+ ++M + GI D +++L+C V AE +E G+ D
Sbjct: 425 FCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + ++G + ++++ M++ S V++NG K A + +
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLD 544
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+++ G +P +TY +++ + R ++ + K +I+ + G + +Y S+V
Sbjct: 545 AMLNIGVVPDDITYNTLLEGHHR---HANSSKRYIQKPEIGIVADLASYKSIV 594
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N F K A KV++++ + P V++ ++IN YC++G + ++ +M++
Sbjct: 245 ILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKS 304
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
V YS+++ K ++ A L +M +G PN I+ +L +HG ++N
Sbjct: 305 RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL--IHGHSRN 358
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
Y +++ G + ++N +C+ G S A+KVF E+ ++ VV++++++ Y K
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------MHGRAKNLRQLEK--------- 291
G + + RL +M+ P+V+ Y++L++ M G ++ K
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+TT+I ++ E D+ + Y + G D + +V F K
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCK 392
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 111/224 (49%), Gaps = 1/224 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L P + +Y IL + ++G E L+ M E+G D Y +++ + A
Sbjct: 356 LVPDNV-IYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADA 414
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
LF E E+G++ D F L+ + +EG + K L + M + ++++G
Sbjct: 415 NALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDG 474
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K A +++ ++IS+ P ++YA ++N YC +G S+A +++ EM +KG
Sbjct: 475 FCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPT 534
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+V ++++ Y ++G + A + KM +G P+ YN+L++
Sbjct: 535 LVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLIN 578
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 152/336 (45%), Gaps = 25/336 (7%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMY 63
L Y+ MK++G+V D+ Y ++ + + G ++ ++ LE + LD+ Y
Sbjct: 345 LMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLE-QGCALDVVA-----Y 398
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ + L K + F +M E+G++ D + +LI + A LF +
Sbjct: 399 NTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQ 458
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
K + D+ + L+ + + +EK E+ M + ++ + ++VNG+
Sbjct: 459 KNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSE 518
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++++++I +G P VT ++I YCR G SKA++ +M +G + Y++++
Sbjct: 519 AFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLIN 578
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------- 290
+ K + A L+ KM+ KG +P+V YN +++ R +++ E
Sbjct: 579 GFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDP 638
Query: 291 ---KYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
YTT+I+ Y +F++E G V D
Sbjct: 639 DRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 103/216 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + L K GR F +M G+ D + Y +L+ A+++F +
Sbjct: 258 YNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDML 317
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G+ DL F L+ + G +++ L MK + L + I +++NG+ +
Sbjct: 318 HRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMS 377
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+++ ++++ QGC V Y +I+N C+ L + A +F EM ++G +++++
Sbjct: 378 EALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLI 437
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ K G + A+ L M K +P++ YN L+D
Sbjct: 438 HGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILID 473
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 3/187 (1%)
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
++ + +C I +VK + E+KG+ D+ + L+ Y EG++ + EV+ S
Sbjct: 189 NIMVNALCKDHKIDDVK---PFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNS 245
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
M L + ++NG K+ Y A V+ +++S G P TY +++ CR
Sbjct: 246 MSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNN 305
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+ +A+ +F +M +G ++++SS++ + + G + A+ MK G P+ IY
Sbjct: 306 FLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTI 365
Query: 276 LMDMHGR 282
L++ + R
Sbjct: 366 LINGYCR 372
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 113/263 (42%), Gaps = 35/263 (13%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ + I+ ++L K + ++ F DM++KGI D Y +LI ++ + A E+
Sbjct: 184 NVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVM 243
Query: 119 KEAEEKGM--------------------LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
KG+ +R VF +++ + + +VES +N
Sbjct: 244 NSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRN 303
Query: 159 AEL-------------NIS-DCISCVIVNGFSKRRAYW-AAVKVYEQLISQGCIPGQVTY 203
+S D IS + G S R + A+ + + + G +P V Y
Sbjct: 304 NNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIY 363
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+IN YCR G+ S+A ++ +M ++G VVAY++++ K + DA L +M
Sbjct: 364 TILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVE 423
Query: 264 KGCEPNVWIYNSLMDMHGRAKNL 286
+G P+ + +L+ H + N+
Sbjct: 424 RGVVPDFCTFTTLIHGHCKEGNM 446
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 99/231 (42%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
++ +L S ++ + E F+ ++ KG L + SL+ + V +A E++ E
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G+ ++ +V ++ ++ + M+ + ++N + +
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +V + +G P TY ++IN C+ G Y +A+ VF EM G Y+++
Sbjct: 237 GEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTL 296
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+ + +A + + M +G P++ ++SL+ + R +L Q Y
Sbjct: 297 LVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMY 347
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Query: 106 ASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD 165
+ ++ V++ E L + G+ D VF L+ Y++ + + + + ++ +S
Sbjct: 93 SGVSRVEIVESLISMSSTCGV--DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSI 150
Query: 166 CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
++ G K A +VY ++ G T ++NA C+ + I+
Sbjct: 151 NACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLID 210
Query: 226 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
M+QKG +V Y++++ Y + G + +A ++ M KG +P ++ YN++++
Sbjct: 211 MEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVIN 263
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 133/281 (47%), Gaps = 3/281 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK G+ + Y ++ A K + + A+ + + + D + L +
Sbjct: 371 EMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFD---PDVVTFNTLIAAFC 427
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G E LK R+ + + + Y LI F EV VA +L E +G D+
Sbjct: 428 REGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVV 487
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
L+ + G V++ L V E M ++ I V+++G K+R AA + ++
Sbjct: 488 TLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEM 547
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ Q P + Y ++I+ + R S A K+F M++KG + +VAY++M+ Y K+G +
Sbjct: 548 LEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMM 607
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+A+ ++ M+ GC P+ + Y +L+D + + +++ ++
Sbjct: 608 NEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRF 648
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
++Y +L L K +M E+ + D VY +LI F ++ A ++F+
Sbjct: 521 ANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFE 580
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
EEKG RD+ + ++ Y + GM+ + + + SM+ + +++G++K+
Sbjct: 581 FMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKG 640
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
AA++ ++ + C P VTYAS+I YC IG AE +F MQ +G VV Y+
Sbjct: 641 DIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYT 700
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
++ K + A M C PN
Sbjct: 701 VLIGSLFKKDKAIQAAAYFEHMLLNHCSPN 730
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 123/296 (41%), Gaps = 16/296 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D + G L +M+ KGI+ Y ++I +++ E L E +
Sbjct: 314 YNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMK 373
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G+ +++++ ++ + + L V+ M + + ++ F +
Sbjct: 374 ERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVE 433
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+K+ + I + P Q++Y +I+ +C G A + +EM +G VV +++
Sbjct: 434 EALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALI 493
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNL--RQLEK--- 291
+G++ +A+ + KM + P+ IYN L+ M AKNL LE+
Sbjct: 494 HGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQ 553
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YTT+I + + + K + GG D M+ + K + E
Sbjct: 554 PDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNE 609
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
++ E D +CV+V G ++ E +GC+PG V Y +I+ YCR G
Sbjct: 268 RDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDV 327
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+ + EM+ KG VV Y +++ G+ + L+ +MK +G PNV IYN++
Sbjct: 328 GRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTV 387
Query: 277 M 277
+
Sbjct: 388 I 388
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 19/223 (8%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
RK+ P Y L D K G L+F DM ++ + YASLIC + +I
Sbjct: 618 RKVGCIPDE-FTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGN 676
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
AE LF + +G+ ++ + L+ ++ + E M + +D
Sbjct: 677 TDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHY 736
Query: 171 IVNGFSKRR---------------AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
+VNG + R A + V++ LIS G P Y +II + CR +
Sbjct: 737 LVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNM 796
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMV---AMYGKTGRIRDAM 255
KA ++ +M KG V + S++ + GK+G+ R A+
Sbjct: 797 LGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSAL 839
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L L + GR E L F + +KG D +Y +LI F + ++FK +
Sbjct: 523 YTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQ 582
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ ++ L+ M+ EG VE LE++ + L ++ G+ + +
Sbjct: 583 SNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFS 642
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+K++E L P +T+ +I+AYC+ G A +F M ++G + ++ YS ++
Sbjct: 643 KAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLI 702
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y KT A L KM PN+ Y+ L+D
Sbjct: 703 DGYFKTENTESAFELYEKMLGDRVSPNIVSYSILID 738
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 128/284 (45%), Gaps = 3/284 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + Y M G V D ++ + G ++ F + R L L + +
Sbjct: 430 NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTL---NNY 486
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
++ L D + R + LK + M ++ D Y L+ A + A LF +
Sbjct: 487 LFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQL 546
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+KG D ++ L+ + ++ L++ + M++ + CI V++N F +
Sbjct: 547 LKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCV 606
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+++ ++I G P VTY ++I YC + ++SKA K+F ++ + ++ +
Sbjct: 607 ENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTIL 666
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+ Y K GR+ DAM + + M +G EPN+ Y+ L+D + + +N
Sbjct: 667 IDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTEN 710
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 143/316 (45%), Gaps = 27/316 (8%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILCDSLGKSG 74
G+ +D + IM+A+ ++GD K +E +R L ++P+ Y IL + L ++G
Sbjct: 340 GVKMDVVIFSSIMDAYVRVGDLGKA----IEVYTRMLKEGISPNVV-TYSILINGLCRNG 394
Query: 75 RAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R E F + ++G+ +PSV Y+SLI F ++ L+ KG + D+ V
Sbjct: 395 RVLEACGVFGQILKQGL--EPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVV 452
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
L+ +GM+++ L L +++ + +++G + + +K+Y +
Sbjct: 453 CSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMG 512
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
IP VTY ++ G +A +F ++ +KGF + Y +++ + K
Sbjct: 513 MYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPA 572
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQLEK-------------YTTVI 296
+++ M+ G P++ IYN L++M G +N+ +L + Y T+I
Sbjct: 573 TGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMI 632
Query: 297 SAYNMAREFDMCVKFY 312
Y + F +K +
Sbjct: 633 CGYCSLKIFSKAIKLF 648
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 109/227 (48%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y+ + +S K G + L F R + E+G++ ++ ++ VA + F
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G +L F L+ +Y +E +++ + M + I +++NG +
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
++ +++G V ++SI++AY R+G KA +V+ M ++G VV YS +
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ + GR+ +A + ++ +G EP+V Y+SL+D +++NLR
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRD 433
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 7/272 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + ++ G D YC +++ F K D +F +S + +Y +L
Sbjct: 540 LALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIF---PDICIYNVL 596
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ + G +L+ R++ + G+ D Y ++IC + S+ A +LF+ +
Sbjct: 597 INMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRT 656
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAA 184
+ F L+ Y ++G ++ + + SM + E NI SC+I +G+ K +A
Sbjct: 657 QPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNIL-TYSCLI-DGYFKTENTESA 714
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++YE+++ P V+Y+ +I+ C+ GL +A F + V+AY ++
Sbjct: 715 FELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRG 774
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
Y K GR+ +AM L M G P+ + +L
Sbjct: 775 YCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 98/238 (41%), Gaps = 35/238 (14%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL + L ++G+ E LF A
Sbjct: 312 IYSILINGLFRAGKLEE-----------------------------------GNSLFSMA 336
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ D+ +F ++ Y+ G + K +EV M ++ + +++NG +
Sbjct: 337 LARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRV 396
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A V+ Q++ QG P +TY+S+I+ +C+ ++ M +KG VV S +
Sbjct: 397 LEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSML 456
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+ + G + +A+R + +G N +++N+L+D R K R K ++ Y
Sbjct: 457 INGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMY 514
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 131/285 (45%), Gaps = 3/285 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q +E+MKS I D Y ++ K+ + L +E E +D S +
Sbjct: 387 QGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVD---PSVETF 443
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D+ G++G+ + DM++KGI + + S++ +F ++ A + +
Sbjct: 444 NTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIH 503
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
K ++ + +V+ ++ YIE G E+ +VE MK++ ++ S +++ G K
Sbjct: 504 KDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDE 563
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ L +QG P V+Y +II+A C G +A ++ EM + + Y +++
Sbjct: 564 AEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLS 623
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G GR+ D L M K EP+ IY + + + +L++
Sbjct: 624 ALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENESKVASLKK 668
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 133/307 (43%), Gaps = 38/307 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++M G+ + Y +++ K GD E A F + D + Y +L
Sbjct: 215 LKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLE---AGFRLRDQMLQDGRKPNVVTYNVL 271
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L ++GR E +M +L D Y+ L + + LF E+ +KG+
Sbjct: 272 LSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGV 331
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ L+ ++G V K +V+E + + L + I ++NG+ + R A
Sbjct: 332 IIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFS 391
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++EQ+ S+ P +TY ++IN C++ + ++AE + +EM++ G D V +++++ YG
Sbjct: 392 IFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYG 451
Query: 247 KTGRIRDAMRLVAKMKPKGCE-----------------------------------PNVW 271
+ G++ +++ M+ KG + PN
Sbjct: 452 RAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQ 511
Query: 272 IYNSLMD 278
+YNS++D
Sbjct: 512 VYNSIID 518
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 137/318 (43%), Gaps = 39/318 (12%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
+AG D+ + + ++A GD ++ A+ L R P Y ++ L +SG
Sbjct: 151 AAGARPDTFAWNKAVQACVAAGDLDEALAM-LRRMGRSEGAPPPDAFSYNVVIAGLWRSG 209
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+ + LK F +M ++G+ + Y ++I +++ L + + G ++ +
Sbjct: 210 KGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYN 269
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAEL--------------------------------- 161
L+ G +++T +++ M + +
Sbjct: 270 VLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKK 329
Query: 162 -NISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
I +C +++NG K A +V E L+ G +P Y ++IN YC++ A
Sbjct: 330 GVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGA 389
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+F +M+ + + Y++++ K I +A LV +M+ G +P+V +N+L+D
Sbjct: 390 FSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDA 449
Query: 280 HGRAKNLRQLEKYTTVIS 297
+GRA QLEK TV+S
Sbjct: 450 YGRAG---QLEKCFTVLS 464
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 143/320 (44%), Gaps = 12/320 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M S ++ D Y + + + GDS + +LF E + + + + IL + L
Sbjct: 289 DEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVII---GAYTCSILLNGL 345
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G+ + + + G++ ++Y +LI + + +++ A +F++ + + + D
Sbjct: 346 CKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDH 405
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + M+ + ++V M+ + ++ S +++ + + V
Sbjct: 406 ITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSD 465
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G +++ S++ A+C+ G +A + +M K Y+S++ Y ++G
Sbjct: 466 MQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGG 525
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE-FDMCV 309
A LV KMK G +++ YN L + G KN Q+++ +I YN+ + V
Sbjct: 526 TEQAFLLVEKMKSSGVSASIFTYNLL--LKGLCKN-SQIDEAEELI--YNLTNQGLRPDV 580
Query: 310 KFYNEFRM---NGGVIDRAM 326
YN N G DRA+
Sbjct: 581 VSYNTIISACCNKGDTDRAL 600
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ F+K GD K LF E R + P Y + +L K+ + F R
Sbjct: 225 YNTVIDGFFKEGDVNKACDLFKEMVQRGI---PPDLVTYNSVVHALCKARAMDKAEAFLR 281
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M K +L + Y +LI ++S + K A +FKE +L D+ L+ + G
Sbjct: 282 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 341
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ +V ++M N +++NG++ + +++ ++ G P T+
Sbjct: 342 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 401
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+I AY G+ KA +F EM+ G VV Y +++A + G++ DAM +M +
Sbjct: 402 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 461
Query: 265 GCEPNVWIYNSLM 277
G P+ + YN L+
Sbjct: 462 GVAPDKYAYNCLI 474
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 104/218 (47%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ + +L + G + + F +M++ G+ D Y ++I + I ++ A E F +
Sbjct: 398 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 457
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
++G+ D + L+ + G + K E++ + N +++ I+N K
Sbjct: 458 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 517
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +++ ++ G P V Y +++ YC +G KA +VF M G + VV Y +
Sbjct: 518 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 577
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+V Y K GRI + + L +M +G +P+ +Y+ ++D
Sbjct: 578 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 615
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M GI D + +++A+ G +K +F E R + P Y+ + +
Sbjct: 385 FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF--NEMRDHGVKPDVV-TYRTVIAA 441
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + G+ + ++ F M ++G+ D Y LI F + + A+EL E GM D
Sbjct: 442 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 501
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F ++ + G V + + N L+ + ++++G+ A++V++
Sbjct: 502 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFD 561
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++S G P V Y +++N YC+IG + +F EM Q+G + YS ++ + G
Sbjct: 562 AMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAG 621
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R A +M G ++ YN ++
Sbjct: 622 RTVPAKMKFHEMTESGIAMDICTYNIVL 649
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 149/341 (43%), Gaps = 29/341 (8%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ ++ G+ ++ ++E F + +++ + L + +L P Y IL
Sbjct: 134 LAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLH-RTPELGCVPD-VFSYSIL 191
Query: 67 CDSL---GKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEA 121
SL GKSG+A ++L+ M E G + P+V Y ++I F +V A +LFKE
Sbjct: 192 LKSLCDQGKSGQADDLLRM---MAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM 248
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++G+ DL + +V + ++K + M N + ++ ++ G+S +
Sbjct: 249 VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW 308
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AV+V++++ +P VT + ++ + C+ G +A VF M KG + V +Y+ M
Sbjct: 309 KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIM 368
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ Y G + D L M G P+ + +N L I AY
Sbjct: 369 LNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL-------------------IKAYAN 409
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
D + +NE R +G D ++ ++ ++++
Sbjct: 410 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 450
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 134/328 (40%), Gaps = 49/328 (14%)
Query: 43 ALFLECESRKLD---LTPSSTHMYKILCDSLGKSGRAFEILKFFRDM------------- 86
ALF SR L+P+S H Y IL D ++ R L FF +
Sbjct: 95 ALFNRAASRAQGPRVLSPTS-HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIAN 153
Query: 87 -----------------------KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
E G + D Y+ L+ S + A++L + E
Sbjct: 154 HLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE 213
Query: 124 KGML--RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G + ++ + ++ + +EG V K ++ + M + +V+ K RA
Sbjct: 214 GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAM 273
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A Q++++ +P TY ++I Y G + +A +VF EM++ VV S +
Sbjct: 274 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 333
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ K G+I++A + M KG P+V+ YN +++ + L + ++ +
Sbjct: 334 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 393
Query: 302 ARE---FDMCVKFYNEFRMNGGVIDRAM 326
A + F++ +K Y N G++D+AM
Sbjct: 394 APDFYTFNVLIKAY----ANCGMLDKAM 417
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 119/269 (44%), Gaps = 19/269 (7%)
Query: 17 GIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
G+ LD + I+ K+G D++ + L + + L P + +Y +L D
Sbjct: 497 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDL-----TVNVGLHPDAV-VYNMLMDGYCLV 550
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+ + L+ F M GI + Y +L+ + I + LF+E ++G ++ +
Sbjct: 551 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRG-IKPSTIL 609
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISD-----CISCVIVNGFSKRRAYWAAVKVY 188
+++ +G+ E V MK E+ S C +++ G K R + A+ ++
Sbjct: 610 YSIII----DGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 665
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++L + +T ++I+ + +A+ +F + + VV YS M+ K
Sbjct: 666 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 725
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G + +A + + M+ GCEPN + N ++
Sbjct: 726 GLVEEAEDMFSSMQNAGCEPNSRLLNHVV 754
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 38/227 (16%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ M SAGI + Y ++ + KIG ++ +LF E R + ST +Y
Sbjct: 554 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIK---PSTILY 610
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+ D L ++GR F +M E GI D IC++ + F EA
Sbjct: 611 SIIIDGLFEAGRTVPAKMKFHEMTESGIAMD-------ICTYNIVLRGLFKNRCFDEA-- 661
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ +F +L M N ++NI + +++G + R
Sbjct: 662 ------IFLFKELRAM------------------NVKINIITLNT--MIDGMFQTRRVEE 695
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
A ++ + +P VTY+ +I + GL +AE +F MQ G
Sbjct: 696 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 148/334 (44%), Gaps = 34/334 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSST--HMYKI 65
+++M+ + D Y ++ +F K G + + + E ++ DL S + +
Sbjct: 178 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 237
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
LCD +A I F +K GI D Y S+I + + A L KE E G
Sbjct: 238 LCDY----SKAISI---FSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG 290
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK--NAELNISDCISCVIVNGFSKRRAYWA 183
+L + + L+ +Y+E + L V MK N L+++ C ++++ + +
Sbjct: 291 VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTC--NIMIDVYGQLDMVKE 348
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +++ L P V+Y +I+ Y L+ +A +F MQ+K ++ VV Y++M+
Sbjct: 349 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
+YGKT A LV +M+ +G EPN Y+T+IS + A
Sbjct: 409 IYGKTMEHEKATNLVQEMQSRGIEPNAIT-------------------YSTIISIWGKAG 449
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
+ D + + R +G ID+ + M+ + ++
Sbjct: 450 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 483
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 128/292 (43%), Gaps = 36/292 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+H + M+ I + Y +++ + K + EK L E +SR ++ P++ Y +
Sbjct: 385 IHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE--PNAI-TYSTI 441
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA----------EVKVAEE 116
GK+G+ F+ ++ G+ D +Y ++I ++ + E+K+ +
Sbjct: 442 ISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDN 501
Query: 117 L---------------------FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
+ F++A E G ++D+ VF ++ +Y +EV E
Sbjct: 502 IPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEK 561
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIG 214
M+ A + +++N + K+R + A VY ++ +GC+ P +V + +++ Y
Sbjct: 562 MRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHF-QMLSLYSSKK 620
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
+ E +F ++ + + A+Y + ++ DA R++ +M+ +G
Sbjct: 621 DFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 672
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 91/189 (48%), Gaps = 16/189 (8%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V++ + + + A +++++ + P + TY+++I ++ + G++ A +M+Q
Sbjct: 160 VVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD 219
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+V YS+++ + + A+ + +++K G P++ YNS+++++G+AK R+
Sbjct: 220 RVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREA 279
Query: 290 E----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
Y+T++S Y +F + + E + +D IM+ V
Sbjct: 280 RLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDV 339
Query: 334 FSKLSQIEE 342
+ +L ++E
Sbjct: 340 YGQLDMVKE 348
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/354 (17%), Positives = 151/354 (42%), Gaps = 33/354 (9%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC-----ESRKLDLTPSSTHMYK 64
+ ++K +GI D Y ++ + K A LF E E + + P++ Y
Sbjct: 248 FSRLKRSGITPDLVAYNSMINVYGK-------AKLFREARLLIKEMNEAGVLPNTVS-YS 299
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L ++ + E L F +MKE D + +I + + VK A+ LF +
Sbjct: 300 TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 359
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ ++ + ++ +Y E + + + + M+ ++ + ++ + K + A
Sbjct: 360 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 419
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ +++ S+G P +TY++II+ + + G +A +F +++ G + V Y +M+
Sbjct: 420 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 479
Query: 245 YGKTGRIRDAMRLVAKMK-----PK-----------GCEPNVWIYNSLMDMHGRAKNLRQ 288
Y + G + A RL+ ++K P+ E W++ + + ++
Sbjct: 480 YERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFE----SGEVKD 535
Query: 289 LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ + +I+ Y+ + + ++ + + R G D + +++ + K + E+
Sbjct: 536 ISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEK 589
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 124/275 (45%), Gaps = 3/275 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + ++ MK G+V D+ Y +++ K GD L +E + T S Y
Sbjct: 298 QEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVS---Y 354
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L L ++G+ + FR ++E+G D VY+ ++ ++V +L+ +
Sbjct: 355 SSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVH 414
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ D + L+ + + L V E M ++ ++ + ++V+GF K R
Sbjct: 415 HNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDE 474
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ G +P Y IIN C++ +F +M ++G+ V YS ++
Sbjct: 475 AFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIID 534
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ K ++ +A RL KM +G +PNV+ Y SL++
Sbjct: 535 SFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLIN 569
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 3/222 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ K++ GIV + Y I+ K+ S+ V +F + R P T +Y I+ D
Sbjct: 478 FLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKR--GYVPD-TVVYSIIID 534
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
S K+ + E + F M ++G + Y SLI + LFK +G+
Sbjct: 535 SFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTP 594
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D ++ L++ Y + ++ LE+ M L+ + ++ GFSK A A +
Sbjct: 595 DRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLM 654
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
E++ ++G P VTY ++I Y +IG KA + M Q G
Sbjct: 655 EEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAG 696
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
P +T+ + + + G+ E ++ F MK+ G++ D Y+ L+ +V
Sbjct: 277 NPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGY 336
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+L E G+ L + L+ G VE E+ ++ + +I+NG
Sbjct: 337 DLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGC 396
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+ ++ ++ +P Y S+I A+CR + A VF M G V
Sbjct: 397 CQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNV 456
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V + +V +GK I +A + K++ G PN+ +Y +++
Sbjct: 457 VTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIIN 499
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 101/228 (44%), Gaps = 2/228 (0%)
Query: 42 AALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASL 101
A LFL + R+ + P+ MY+++ + L K ++ + F DM ++G + D VY+ +
Sbjct: 475 AFLFLH-KVRQFGIVPNLC-MYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSII 532
Query: 102 ICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
I SF ++ A LF + ++G ++ + L+ + + + + + + M L
Sbjct: 533 IDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGL 592
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
+ ++ + KR AA++++ + G Y +I + ++ A+
Sbjct: 593 TPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQC 652
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
+ EM KG VV Y++++ Y K G R A M G P+
Sbjct: 653 LMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPD 700
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 119/284 (41%), Gaps = 19/284 (6%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
AFE+L +M+ KG+ + + Y + + + +V A + ++G + F
Sbjct: 230 AFELLS---EMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNA 286
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
++ + EG V++ +EV ++MK L ++V+G K+ + ++ G
Sbjct: 287 VIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNG 346
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
P V+Y+S+++ CR G A ++F ++++GF + YS ++ + I
Sbjct: 347 IAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVC 406
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR----------------QLEKYTTVISAY 299
L M P+ + Y SL+ R +NL + T ++ +
Sbjct: 407 DLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGF 466
Query: 300 NMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
R D F ++ R G V + M +++ K+++ + +
Sbjct: 467 GKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHV 510
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L +L + ++ M G D + SLI + ++ VA++LF +
Sbjct: 132 YNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMP 191
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G +D + L+ + E G V++ LE+ ++ ++ +V G R
Sbjct: 192 LRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTH----AALVKGLCDARRGE 247
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ + +++ G P YA++++ +CR +AEK+ EM G C V +++V
Sbjct: 248 EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVV 307
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y + GR+ A+R+ MK KGCEPNVW YN+++
Sbjct: 308 NAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMV 342
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 4/196 (2%)
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
F M +G +D YA+LI F V A ELF+E E+ D+ LV
Sbjct: 186 LFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQP----DMYTHAALVKGLC 241
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ E+ L +++ MK + +V+ + + + A K+ ++ G +P V
Sbjct: 242 DARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAV 301
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
T +++NAYCR G S A +VF M+ KG + V Y++MV + G++ AM L+ +M
Sbjct: 302 TCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM 361
Query: 262 KPKGCEPNVWIYNSLM 277
+ G EP+V YN L+
Sbjct: 362 RECGVEPDVVTYNLLI 377
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 98/216 (45%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + Y +L D+L K+G+ E F ++ +GI + + ++I + VA
Sbjct: 403 ADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTF 462
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
++ G D + + + + L ++ M ++ S ++++ K
Sbjct: 463 LEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFK 522
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
R Y A +++ Q++S GC P VTY + + AYC G +AE V +EM++ G +A
Sbjct: 523 ERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMA 582
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
Y++++ + G+ A+ ++ M PN + +
Sbjct: 583 YNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTF 618
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 11/271 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH--MYKILC 67
++KM G D+ Y ++E F + G ++ LF E E + TH + K LC
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDM-----YTHAALVKGLC 241
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D+ R E L + MKE G YA+L+ + + + AE++ E + G++
Sbjct: 242 DA----RRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLV 297
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+V Y EG + + V ESMK + +V GF + A+ +
Sbjct: 298 PCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMAL 357
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+Q+ G P VTY +I C G A ++ M+ G Y+ ++ K
Sbjct: 358 LDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCK 417
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
TG++ +A L ++ +G PN +N++++
Sbjct: 418 TGKVDEACSLFDGLEYRGIRPNSVTFNTVIN 448
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 111/288 (38%), Gaps = 38/288 (13%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
ES KL + Y + G+ ++ + M+E G+ D Y LI
Sbjct: 324 ESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCID 383
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ A L + E G+ D + L+ + G V++ + + ++ + +
Sbjct: 384 GHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTF 443
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC-----RIGL-------- 215
++NG K + A E+++S GC P TY+ I C R GL
Sbjct: 444 NTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQ 503
Query: 216 ----------------------YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
Y A +++ +M G VV Y++ V Y GR+ +
Sbjct: 504 KDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHE 563
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEKYTTVISA 298
A +V +MK G + YN+L+D H G+ + + K+ T +++
Sbjct: 564 AENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVAS 611
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 90/214 (42%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ GR ++ F MK KG + Y +++ F ++ +V A L + E G+ D+
Sbjct: 312 REGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVV 371
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ +G +E ++ M+ L V+++ K A +++ L
Sbjct: 372 TYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGL 431
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+G P VT+ ++IN C+ G + A +M G YS + KT
Sbjct: 432 EYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGS 491
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
R+ + + +M K +P+ Y ++D + +N
Sbjct: 492 REGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERN 525
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/280 (17%), Positives = 120/280 (42%), Gaps = 26/280 (9%)
Query: 3 SQSKLHYYE----KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS 58
++ +LH E +MK GI++D+ Y +++ IG ++ +
Sbjct: 557 NEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTIL------------- 603
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
HM + F R + ++ + ED + + + +A+V ELF
Sbjct: 604 -KHMTGV-----ASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVF---ELF 654
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ ++ + +L ++ + EE +++ +V MK +L +++ I +VN F K
Sbjct: 655 ELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKL 714
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
R Y A + +I G +P ++Y +++ + G +A+++F ++ K ++ + +
Sbjct: 715 RMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVW 774
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ + G +++ ++ C+P+ Y L +
Sbjct: 775 KIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTE 814
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 140/307 (45%), Gaps = 13/307 (4%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S + +MK G+ + Y I+ F+K+ + +LF E R + P Y
Sbjct: 248 SAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEM--RYMYCRPD-VFTYT 304
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L LGK+GR E F+ +M+ + D V ++I + +LF+E
Sbjct: 305 ELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVS 364
Query: 125 GMLRDLEVFLKLVLMYIE-EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ ++ + ++ E + V + E MK + ++ S ++++GF K
Sbjct: 365 HCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEK 424
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ + E++ +G P Y S+I+A + Y A ++F E+++ Y+ M+
Sbjct: 425 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIK 484
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-------KNLRQLEKYTTV- 295
GK GR+ DA+ L +M GC PNV+ YN+LM RA +R+++++ +
Sbjct: 485 HLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLP 544
Query: 296 -ISAYNM 301
I++YN+
Sbjct: 545 DINSYNI 551
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 11/243 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++E+MK +GI Y +++ F K EK L E + + P++ Y L D
Sbjct: 393 WFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAA---YCSLID 449
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+LGK+ R + F+++KE VYA +I + A LF E + G
Sbjct: 450 ALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTP 509
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKN----AELNISDCISCVIVNGFSKRRAYWAA 184
++ + L+ M+++ L + M+ ++N + +I+NG +K A
Sbjct: 510 NVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYN----IILNGLAKTGGPHRA 565
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++ + + P V+Y ++++A G++ +A ++ EM GF+ ++ YSS++
Sbjct: 566 MEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEA 625
Query: 245 YGK 247
GK
Sbjct: 626 IGK 628
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 120/276 (43%), Gaps = 2/276 (0%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +E+M + + + Y I++A ++ +V+ +F E K S Y IL
Sbjct: 355 LKLFEEMGVSHCIPNVVTYNTIIKALFE--SKSRVSEVFSWFERMKGSGISPSPFTYSIL 412
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D K+ R + + +M EKG P+ Y SLI + +A ELF+E +E
Sbjct: 413 IDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 472
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
V+ ++ + G ++ + + + M + +++G ++ A+
Sbjct: 473 SSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALT 532
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ GC+P +Y I+N + G +A ++ M+ V+Y+++++
Sbjct: 533 TMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALS 592
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
G +A L+ +M G E ++ Y+S+++ G+
Sbjct: 593 HAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 1/209 (0%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR- 128
LG + + + F +K + Y S+I + + EL+ E +G
Sbjct: 169 LGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHP 228
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ + + G + + ++ MK + + I +I++ F K A+ ++
Sbjct: 229 DTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLF 288
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ C P TY +I + G +A + EMQ++ V ++M+ GK
Sbjct: 289 EEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKA 348
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ D ++L +M C PNV YN+++
Sbjct: 349 GRLDDGLKLFEEMGVSHCIPNVVTYNTII 377
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 113/271 (41%), Gaps = 4/271 (1%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H+Y +M+ D+ ++ K G + LF E + + Y +
Sbjct: 321 HFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLF---EEMGVSHCIPNVVTYNTII 377
Query: 68 DSLGKS-GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+L +S R E+ +F MK GI P Y+ LI F ++ A L +E +EKG
Sbjct: 378 KALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGF 437
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ L+ + + E+ + +K + S + V++ K A+
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAIN 497
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++ GC P Y ++++ R + +A +MQ+ G + +Y+ ++
Sbjct: 498 LFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLA 557
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
KTG AM ++ MK +P+ YN+++
Sbjct: 558 KTGGPHRAMEMLTNMKNSTIKPDAVSYNTVL 588
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 186 KVYEQLISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++Y ++ ++G C P VTY+++I+A+C++G A ++ EM++ G Y+ ++++
Sbjct: 215 ELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISL 274
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ K + A+ L +M+ C P+V+ Y L+ G+A
Sbjct: 275 FFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKA 313
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ F+K GD K LF E R + P Y + +L K+ + F R
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGI---PPDLVTYNSVVHALCKARAMDKAEAFLR 278
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M K +L + Y +LI ++S + K A +FKE +L D+ L+ + G
Sbjct: 279 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 338
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ +V ++M N +++NG++ + +++ ++ G P T+
Sbjct: 339 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 398
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+I AY G+ KA +F EM+ G VV Y +++A + G++ DAM +M +
Sbjct: 399 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458
Query: 265 GCEPNVWIYNSLM 277
G P+ + YN L+
Sbjct: 459 GVAPDKYAYNCLI 471
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 105/218 (48%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ + +L + G + + F +M++ G+ D Y ++I + I ++ A E F +
Sbjct: 395 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 454
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
++G+ D + L+ + G + K E++ + N +++ I+N K
Sbjct: 455 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 514
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +++ ++ G P V Y+ +++ YC +G KA +VF M G + VV Y +
Sbjct: 515 VMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 574
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+V Y K GRI + + L +M +G +P+ +Y+ ++D
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 612
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M GI D + +++A+ G +K +F E R + P Y+ + +
Sbjct: 382 FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF--NEMRDHGVKPDVV-TYRTVIAA 438
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + G+ + ++ F M ++G+ D Y LI F + + A+EL E GM D
Sbjct: 439 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F ++ + G V + + N L+ + ++++G+ A++V++
Sbjct: 499 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFD 558
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++S G P V Y +++N YC+IG + +F EM Q+G + YS ++ + G
Sbjct: 559 AMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 618
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R A +M G ++ YN ++
Sbjct: 619 RTVPAKVKFHEMTESGIAMDICTYNIVL 646
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 149/341 (43%), Gaps = 29/341 (8%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ ++ G+ ++ ++E F + +++ + L + +L P Y IL
Sbjct: 131 LAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLH-RTPELGCVPD-VFSYSIL 188
Query: 67 CDSL---GKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEA 121
SL GKSG+A ++L+ M E G + P+V Y ++I F +V A +LFKE
Sbjct: 189 LKSLCDQGKSGQADDLLRM---MAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM 245
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++G+ DL + +V + ++K + M N + ++ ++ G+S +
Sbjct: 246 VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW 305
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AV+V++++ +P VT + ++ + C+ G +A VF M KG + V +Y+ M
Sbjct: 306 KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIM 365
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ Y G + D L M G P+ + +N L I AY
Sbjct: 366 LNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL-------------------IKAYAN 406
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
D + +NE R +G D ++ ++ ++++
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 447
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 134/328 (40%), Gaps = 49/328 (14%)
Query: 43 ALFLECESRKLD---LTPSSTHMYKILCDSLGKSGRAFEILKFFRDM------------- 86
ALF SR L+P+S H Y IL D ++ R L FF +
Sbjct: 92 ALFNRAASRAQGPRVLSPTS-HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIAN 150
Query: 87 -----------------------KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
E G + D Y+ L+ S + A++L + E
Sbjct: 151 HLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE 210
Query: 124 KGML--RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G + ++ + ++ + +EG V K ++ + M + +V+ K RA
Sbjct: 211 GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAM 270
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A Q++++ +P TY ++I Y G + +A +VF EM++ VV S +
Sbjct: 271 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 330
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ K G+I++A + M KG P+V+ YN +++ + L + ++ +
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 390
Query: 302 ARE---FDMCVKFYNEFRMNGGVIDRAM 326
A + F++ +K Y N G++D+AM
Sbjct: 391 APDFYTFNVLIKAY----ANCGMLDKAM 414
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 115/264 (43%), Gaps = 9/264 (3%)
Query: 17 GIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
G+ LD + I+ K+G D++ + L + + L P + +Y +L D
Sbjct: 494 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDL-----TVNVGLHPDAV-VYSMLMDGYCLV 547
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+ + L+ F M GI + VY +L+ + I + LF+E ++G+ ++
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 607
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ + G M + + + C +++ G K R + A+ ++++L +
Sbjct: 608 SIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 667
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+T ++I+ + +A+ +F + + VV YS M+ K G + +
Sbjct: 668 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEE 727
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLM 277
A + + M+ GCEPN + N ++
Sbjct: 728 AEDMFSSMQNAGCEPNSRLLNHVV 751
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 38/227 (16%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ M SAGI + YC ++ + KIG ++ +LF E R + ST +Y
Sbjct: 551 EKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK---PSTILY 607
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+ D L ++GR F +M E GI D IC++ + F EA
Sbjct: 608 SIIIDGLFQAGRTVPAKVKFHEMTESGIAMD-------ICTYNIVLRGLFKNRCFDEA-- 658
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ +F +L M N ++NI + +++G + R
Sbjct: 659 ------IFLFKELRAM------------------NVKINIITLNT--MIDGMFQTRRVEE 692
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
A ++ + +P VTY+ +I + GL +AE +F MQ G
Sbjct: 693 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 3/279 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ MK G LD+ Y +++ F K G KV + E K+ P + Y + D
Sbjct: 82 FHAMKQRGFALDARAYNAVVDGFCKSG---KVDKAYEALEEMKVKHVPPTVATYGSIIDG 138
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K R E F + K KGI + VY+SLI F + + A + +E +KG+ +
Sbjct: 139 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPN 198
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ ++ + + L +SMK + + + +++NG + + Y A ++
Sbjct: 199 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 258
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ QG +P VTY ++I+ ++G + A +F + G ++++++
Sbjct: 259 EMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHAN 318
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
R +A + + + +GC NV SL+D +A+ + Q
Sbjct: 319 RAIEAYHVFEETRLRGCRINVKACISLLDALNKAECIEQ 357
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 128/285 (44%), Gaps = 16/285 (5%)
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
GR + K F++M +G D ++ + + +V+ +F++ + G L D+ +
Sbjct: 3 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ + G +T + +MK + +V+GF K A + E++
Sbjct: 63 SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKV 122
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+ P TY SII+ +I +A +F E + KG + V+ YSS++ +GK GRI +
Sbjct: 123 KHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDE 182
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVIS 297
A ++ +M KG PNV+ +NSLMD +A+ + + Y+ +I+
Sbjct: 183 AYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILIN 242
Query: 298 AYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++++ F+ E + G V + M+ +K+ I +
Sbjct: 243 GLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITD 287
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 23/308 (7%)
Query: 36 GDSEKVAALFLECESR--KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
G E +F E R + DLT +T+M D + K+G + F D+K G L
Sbjct: 3 GRKEDGHKIFKEMNRRGCQPDLTLLNTYM-----DCVFKAGDVEKGRAIFEDIKGYGFLP 57
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D Y+ LI + + +F +++G D + +V + + G V+K E +
Sbjct: 58 DVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEAL 117
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
E MK + + I++G +K A ++E+ S+G + Y+S+I+ + ++
Sbjct: 118 EEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKV 177
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G +A + EM +KG V ++S++ K I +A+ MK C PN + Y
Sbjct: 178 GRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTY 237
Query: 274 NSLMDMHGRAKN-------LRQLEK---------YTTVISAYNMAREFDMCVKFYNEFRM 317
+ L++ R + ++++K YTT+IS + F+
Sbjct: 238 SILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKA 297
Query: 318 NGGVIDRA 325
NGG+ D A
Sbjct: 298 NGGIPDAA 305
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 118/239 (49%), Gaps = 3/239 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++EKMK+ GI S Y +++ F K EK L E + + P++ Y L D
Sbjct: 393 WFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAA---YCSLID 449
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
SLG++ R + F+++KE VYA +I F + + A +LF E E+ G
Sbjct: 450 SLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSP 509
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ I GM+++ ++ +M+ +I+NG +K A++++
Sbjct: 510 DVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMF 569
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ +P V+Y +I++ R G++ A K+ EM+ KGF+ + YSS++ GK
Sbjct: 570 TKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGK 628
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 20/303 (6%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S+T+M I C L +SG E+ + +DM P+ ++ ++ V A +
Sbjct: 124 STTYMALIRC--LEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSV 181
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFS 176
F + + + V+ L+LM + EG EK E+ + + D I+ +++ F
Sbjct: 182 FYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFG 241
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K Y A ++++++ G P + Y +I+ Y ++ A ++ EM+ KG V
Sbjct: 242 KLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVF 301
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
Y+ ++ GK GR+ DA L M GC+P+V + N+L+++ GRA L K
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
Query: 292 -----------YTTVISA-YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
Y TVI A + ++ + + NG I++ F K ++
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR 421
Query: 340 IEE 342
+E+
Sbjct: 422 VEK 424
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 15/303 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++MK G+ Y I+ ++K+ E AAL L E + P+ Y L
Sbjct: 253 FDEMKENGLHPTEKIYTTILAMYFKLNKVE--AALRLVEEMKGKGCAPT-VFTYTELIKG 309
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LGK GR + F +M + G D + +LI ++ A +LF + + +
Sbjct: 310 LGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPN 369
Query: 130 LEVFLKLVLMYIE-EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + ++ E + + E MK + S ++++GF K A+ +
Sbjct: 370 VVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLL 429
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ +G P Y S+I++ R Y A ++F E+++ Y+ M+ +G
Sbjct: 430 EEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNC 489
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM----------DMHGRAKNLRQLEKYTTVISA 298
GR+ DA+ L + + GC P+V+ YN+LM + H +N+R+ T I +
Sbjct: 490 GRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRE-NGCTPDIKS 548
Query: 299 YNM 301
+N+
Sbjct: 549 HNI 551
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 119/316 (37%), Gaps = 56/316 (17%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L + KM S + Y +++A ++ AAL+ E + + + PSS Y
Sbjct: 352 EDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFE-KMKANGIAPSS-FTY 409
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL D K+ R + L +M EKG P+ Y SLI S + A ELF+E +E
Sbjct: 410 AILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKE 469
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
V+ V++ F
Sbjct: 470 NCGRSSARVY-----------------------------------AVMIKHFGNCGRLSD 494
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV ++ + GC P TY ++++ R G+ +A + M++ G + +++ ++
Sbjct: 495 AVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILN 554
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
KTG + A+ + KMK P+ YN T++S + A
Sbjct: 555 GLAKTGGPKRAIEMFTKMKESEIMPDAVSYN-------------------TILSCLSRAG 595
Query: 304 EFDMCVKFYNEFRMNG 319
F+M K E ++ G
Sbjct: 596 MFEMAAKLMREMKLKG 611
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 137/326 (42%), Gaps = 19/326 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M G+ ++ Y ++ + G ++V + E + L P +Y +L D
Sbjct: 225 FQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQ--PDCV-IYAVLLDY 281
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+GR E F + KGI ++Y L+ +A+ + G+ D
Sbjct: 282 LCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPD 341
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+F + Y ++ M+++ + + + M+ L+ +++ K AV +
Sbjct: 342 HHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFN 401
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+I++G P ++S++ C + + KAEK+F E+ +G ++ ++ + G
Sbjct: 402 QMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREG 461
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLE-------------KYT 293
R+ +A RL+ M P+V YN+L+D H GR +L Y
Sbjct: 462 RVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYN 521
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNG 319
T++ Y AR D + E M G
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKG 547
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 131/276 (47%), Gaps = 6/276 (2%)
Query: 5 SKLH-YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
S++H + + M G+ D + + A+ K ++ +F + R+ L+P + Y
Sbjct: 324 SEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIF--DKMRQQWLSPGVVN-Y 380
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D+L K GR + + F M +G+ D V++SL+ ++ + + AE+LF E +
Sbjct: 381 GALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLD 440
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYW 182
+G+ + F L+ EG V + +++ M ++ D IS +V+G
Sbjct: 441 QGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVR-PDVISYNTLVDGHCLTGRID 499
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K+ + ++S G P + TY ++++ YC+ A +F EM KG VV Y++++
Sbjct: 500 EAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTIL 559
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ GR +A L M + +++ Y +++
Sbjct: 560 HGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILN 595
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 100/222 (45%), Gaps = 1/222 (0%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP+ Y + D L K+ F+ M +KG+ + Y LI + S + K
Sbjct: 199 TPNVV-TYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVV 257
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
++ +E G+ D ++ L+ + G + + +S+ + I ++++G+
Sbjct: 258 QMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGY 317
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+ A + ++ G P + + NAY + + +A +F +M+Q+ V
Sbjct: 318 ATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGV 377
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V Y +++ K GR+ DA+ +M +G P++++++SL+
Sbjct: 378 VNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLV 419
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 3/219 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGI-LEDPSV--YASLICSFASIAEVKVAEELFK 119
Y IL L RA E L+ M + G P+V Y ++I V A+ +F+
Sbjct: 167 YNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQ 226
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
+KG+ + + L+ Y+ G ++ +++++ M L I V+++ K
Sbjct: 227 HMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNG 286
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A +++ LI +G P Y +++ Y G S+ M + G ++
Sbjct: 287 RCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFN 346
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
M Y K I +AM + KM+ + P V Y +L+D
Sbjct: 347 IMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALID 385
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 125/314 (39%), Gaps = 32/314 (10%)
Query: 38 SEKVAALF----LECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGI-L 92
SE V +LF EC + + PSS Y IL + GR F + + G L
Sbjct: 70 SELVVSLFNRMIRECSVK---VAPSSC-TYTILIGCFCRMGRLKHGFAAFGLILKTGWSL 125
Query: 93 EDPSVYASLICSFASIAEVKVAEE-LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
+ ++ L+ V A + L + E G ++ + L+ E E+ LE
Sbjct: 126 NNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALE 185
Query: 152 VVESMKN---AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
++ M + + +++G K + A V++ +I +G P TY +I+
Sbjct: 186 LMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIH 245
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
Y G + + ++ EM G V Y+ ++ K GR +A + + KG +P
Sbjct: 246 GYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKP 305
Query: 269 NVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAG 328
+V IY L +HG Y T + M D+ V+ NG D +
Sbjct: 306 HVTIYGIL--LHG----------YATEGALSEMHSFLDLMVR-------NGVSPDHHIFN 346
Query: 329 IMVGVFSKLSQIEE 342
IM ++K + I+E
Sbjct: 347 IMFNAYAKKAMIDE 360
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 87/226 (38%), Gaps = 1/226 (0%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
++D+ P Y L D +GR E K M G+ D Y +L+ + +
Sbjct: 475 RVDVRPDVIS-YNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRI 533
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A LF+E KG+ + + ++ + G + E+ +M N +I
Sbjct: 534 DDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTII 593
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+NG + A K+++ L S+ T +I A + G A +F + G
Sbjct: 594 LNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGL 653
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V Y + K G + + L + M+ G PN + N+L+
Sbjct: 654 VPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALV 699
>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
Length = 500
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + H + L D+L KS R + + M + GI D + +LI F V+ A E
Sbjct: 8 PPNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWE 67
Query: 117 LFKEAEEKGMLRDLEVFLKLVLM--YIEEGMVEKTLEVVESMK-NAELNISDCISCVIVN 173
+F+E + + + FL VL+ Y +E +++ LE++ M+ + I IV+
Sbjct: 68 IFQEMIKSNRCQP-DCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVD 126
Query: 174 GFSKRRAYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
G + + A K + E ++ QGC P VTY S+I C+ A ++ M ++
Sbjct: 127 GLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQ 186
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+V+YS ++ K GR+ DA R+V +M+ GCE NV IY +L+D
Sbjct: 187 PTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLID 232
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 6/208 (2%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L D L KSG + +R MK G + YA+LI +F + A LF
Sbjct: 226 IYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI 285
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ L D+ ++ +V E ++ + M+ A ++ V+++G +
Sbjct: 286 RDYCPL-DVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRS 344
Query: 182 WAAVKVYEQL-ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A ++ E+L GC+ +TY ++I C +F EM+Q+G YS+
Sbjct: 345 EEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSA 400
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
++ +G IR A L +M G P
Sbjct: 401 LIDRLLGSGEIRRAFDLCEEMLASGLSP 428
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 148/334 (44%), Gaps = 34/334 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSST--HMYKI 65
+++M+ + D Y ++ +F K G + + + E ++ DL S + +
Sbjct: 46 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 105
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
LCD +A I F +K GI D Y S+I + + A L KE E G
Sbjct: 106 LCDY----SKAISI---FSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG 158
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK--NAELNISDCISCVIVNGFSKRRAYWA 183
+L + + L+ +Y+E + L V MK N L+++ C ++++ + +
Sbjct: 159 VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTC--NIMIDVYGQLDMVKE 216
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +++ L P V+Y +I+ Y L+ +A +F MQ+K ++ VV Y++M+
Sbjct: 217 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 276
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
+YGKT A LV +M+ +G EPN Y+T+IS + A
Sbjct: 277 IYGKTMEHEKATNLVQEMQSRGIEPNAIT-------------------YSTIISIWGKAG 317
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
+ D + + R +G ID+ + M+ + ++
Sbjct: 318 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 351
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 116/256 (45%), Gaps = 9/256 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+S GI ++ Y I+ + K G ++ A LF + S +++ + + +
Sbjct: 292 QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 351
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G G A +L + L D + I A + A +F++A E G ++D+
Sbjct: 352 GLMGHAKRLLHELK-------LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDI 404
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
VF ++ +Y +EV E M+ A + +++N + K+R + A VY +
Sbjct: 405 SVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYRE 464
Query: 191 LISQGCI-PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ +GC+ P +V + +++ Y + E +F ++ + + A+Y +
Sbjct: 465 MQEEGCVFPDEVHF-QMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERAD 523
Query: 250 RIRDAMRLVAKMKPKG 265
++ DA R++ +M+ +G
Sbjct: 524 KLNDASRVMNRMRERG 539
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/354 (17%), Positives = 151/354 (42%), Gaps = 33/354 (9%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC-----ESRKLDLTPSSTHMYK 64
+ ++K +GI D Y ++ + K A LF E E + + P++ Y
Sbjct: 116 FSRLKRSGITPDLVAYNSMINVYGK-------AKLFREARLLIKEMNEAGVLPNTVS-YS 167
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L ++ + E L F +MKE D + +I + + VK A+ LF +
Sbjct: 168 TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 227
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ ++ + ++ +Y E + + + + M+ ++ + ++ + K + A
Sbjct: 228 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 287
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ +++ S+G P +TY++II+ + + G +A +F +++ G + V Y +M+
Sbjct: 288 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 347
Query: 245 YGKTGRIRDAMRLVAKMK-----PK-----------GCEPNVWIYNSLMDMHGRAKNLRQ 288
Y + G + A RL+ ++K P+ E W++ + + ++
Sbjct: 348 YERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFE----SGEVKD 403
Query: 289 LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ + +I+ Y+ + + ++ + + R G D + +++ + K + E+
Sbjct: 404 ISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEK 457
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 91/189 (48%), Gaps = 16/189 (8%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V++ + + + A +++++ + P + TY+++I ++ + G++ A +M+Q
Sbjct: 28 VVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD 87
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+V YS+++ + + A+ + +++K G P++ YNS+++++G+AK R+
Sbjct: 88 RVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREA 147
Query: 290 E----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
Y+T++S Y +F + + E + +D IM+ V
Sbjct: 148 RLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDV 207
Query: 334 FSKLSQIEE 342
+ +L ++E
Sbjct: 208 YGQLDMVKE 216
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/230 (18%), Positives = 96/230 (41%), Gaps = 8/230 (3%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + GK+ + ++M+ +GI + Y+++I + ++ A LF++
Sbjct: 271 YNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLR 330
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D ++ +++ Y G++ ++ +K + + ++ A W
Sbjct: 331 SSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATW 390
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVAYSS 240
V+ Q G + + +IN Y R Y +VF +M+ G+ D V+A
Sbjct: 391 ----VFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAM-- 444
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
++ YGK A + +M+ +GC ++ ++ ++ K+ +E
Sbjct: 445 VLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVE 494
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ F+K GD K LF E R + P Y + +L K+ + F R
Sbjct: 235 YNTVIDGFFKEGDVNKACDLFKEMVQRGI---PPDLVTYNSVVHALCKARAMDKAEAFLR 291
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M K +L + Y +LI ++S + K A +FKE +L D+ L+ + G
Sbjct: 292 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 351
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ +V ++M N +++NG++ + +++ ++ G P T+
Sbjct: 352 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 411
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+I AY G+ KA +F EM+ G VV Y +++A + G++ DAM +M +
Sbjct: 412 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 471
Query: 265 GCEPNVWIYNSLM 277
G P+ + YN L+
Sbjct: 472 GVAPDKYAYNCLI 484
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 105/218 (48%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ + +L + G + + F +M++ G+ D Y ++I + I ++ A E F +
Sbjct: 408 YTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 467
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
++G+ D + L+ + G + K E++ + N +++ I+N K
Sbjct: 468 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 527
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +++ ++ G P V Y+ +++ YC +G KA +VF M G + VV Y +
Sbjct: 528 VMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 587
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+V Y K GRI + + L +M +G +P+ +Y+ ++D
Sbjct: 588 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 625
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M GI D + +++A+ G +K +F E R + P Y+ + +
Sbjct: 395 FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF--NEMRDHGVKPDVV-TYRTVIAA 451
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + G+ + ++ F M ++G+ D Y LI F + + A+EL E GM D
Sbjct: 452 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLD 511
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F ++ + G V + + N L+ + ++++G+ A++V++
Sbjct: 512 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFD 571
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++S G P V Y +++N YC+IG + +F EM Q+G + YS ++ + G
Sbjct: 572 AMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 631
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R A +M G ++ YN ++
Sbjct: 632 RTVPAKMKFHEMTESGIAMDICTYNIVL 659
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 149/341 (43%), Gaps = 29/341 (8%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ ++ G+ ++ ++E F + +++ + L + +L P Y IL
Sbjct: 144 LAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLH-RTPELGCVPD-VFSYSIL 201
Query: 67 CDSL---GKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEA 121
SL GKSG+A ++L+ M E G + P+V Y ++I F +V A +LFKE
Sbjct: 202 LKSLCDQGKSGQADDLLRM---MAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM 258
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++G+ DL + +V + ++K + M N + ++ ++ G+S +
Sbjct: 259 VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW 318
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AV+V++++ +P VT + ++ + C+ G +A VF M KG + V +Y+ M
Sbjct: 319 KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIM 378
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ Y G + D L M G P+ + +N L I AY
Sbjct: 379 LNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL-------------------IKAYAN 419
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
D + +NE R +G D ++ ++ ++++
Sbjct: 420 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 460
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 134/328 (40%), Gaps = 49/328 (14%)
Query: 43 ALFLECESRKLD---LTPSSTHMYKILCDSLGKSGRAFEILKFFRDM------------- 86
ALF SR L+P+S H Y IL D ++ R L FF +
Sbjct: 105 ALFNRAASRAQGPRVLSPTS-HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIAN 163
Query: 87 -----------------------KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
E G + D Y+ L+ S + A++L + E
Sbjct: 164 HLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE 223
Query: 124 KGML--RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G + ++ + ++ + +EG V K ++ + M + +V+ K RA
Sbjct: 224 GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAM 283
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A Q++++ +P TY ++I Y G + +A +VF EM++ VV S +
Sbjct: 284 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 343
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ K G+I++A + M KG P+V+ YN +++ + L + ++ +
Sbjct: 344 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 403
Query: 302 ARE---FDMCVKFYNEFRMNGGVIDRAM 326
A + F++ +K Y N G++D+AM
Sbjct: 404 APDFYTFNVLIKAY----ANCGMLDKAM 427
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 120/269 (44%), Gaps = 19/269 (7%)
Query: 17 GIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
G+ LD + I+ K+G D++ + L + + L P + +Y +L D
Sbjct: 507 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDL-----TVNVGLHPDAV-VYSMLMDGYCLV 560
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+ + L+ F M GI + VY +L+ + I + LF+E ++G ++ +
Sbjct: 561 GKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG-IKPSTIL 619
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISD-----CISCVIVNGFSKRRAYWAAVKVY 188
+++ +G+ + V MK E+ S C +++ G K R + A+ ++
Sbjct: 620 YSIII----DGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLF 675
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++L + +T ++I+ + +A+ +F + + VV YS M+ K
Sbjct: 676 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKE 735
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G + +A + + M+ GCEPN + N ++
Sbjct: 736 GLVEEAEDMFSSMQNAGCEPNSRLLNHVV 764
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 117/300 (39%), Gaps = 38/300 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ G+ D Y ++ A +IG + F + + + + Y L
Sbjct: 430 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV---APDKYAYNCLIQG 486
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G + + ++ G+ D ++S+I + + V A+ +F G+ D
Sbjct: 487 FCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 546
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V+ L+ Y G +EK L V ++M +A + + + C +VNG+ K + ++
Sbjct: 547 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFR 606
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG------------------- 230
+++ +G P + Y+ II+ + G A+ F EM + G
Sbjct: 607 EMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNR 666
Query: 231 -FDKCVVAYSSMVAMYGK---------------TGRIRDAMRLVAKMKPKGCEPNVWIYN 274
FD+ + + + AM K T R+ +A L A + PNV Y+
Sbjct: 667 CFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYS 726
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 38/227 (16%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ M SAGI + YC ++ + KIG ++ +LF E R + ST +Y
Sbjct: 564 EKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK---PSTILY 620
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+ D L ++GR F +M E GI D IC++ + F EA
Sbjct: 621 SIIIDGLFQAGRTVPAKMKFHEMTESGIAMD-------ICTYNIVLRGLFKNRCFDEA-- 671
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ +F +L M N ++NI + +++G + R
Sbjct: 672 ------IFLFKELRAM------------------NVKINIITLNT--MIDGMFQTRRVEE 705
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
A ++ + +P VTY+ +I + GL +AE +F MQ G
Sbjct: 706 AKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 3/275 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L Y ++M G+ + Y ++ A + G + L E + L Y
Sbjct: 234 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL---APDVFTY 290
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL + K G + L+ F +M +G+ Y +LI + + +V+ ++LF EA
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ DL ++ L+ + G +++ E++ M+ + D ++ G
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K+ +++ +G P VTY ++I+ Y G A ++ EM KGF+ ++ Y++++
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 470
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G+ DA +V +M G P+ Y SL++
Sbjct: 471 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 505
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 140/313 (44%), Gaps = 36/313 (11%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDL-TPSSTHMY 63
+ L Y +MKS + + + ++ A S ALF + +L L T + M
Sbjct: 66 TSLRLYSRMKSLSLPISTASLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIML 121
Query: 64 KILCDSLGKSGRAFEILK----------------------------FFRDMKEKG-ILED 94
+ LC S GK RA E+L+ R+M+E+G I +
Sbjct: 122 RHLC-SAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPN 180
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV-FLKLVLMYIEEGMVEKTLEVV 153
Y ++I + + V A ++F E KG ++ V + L+ Y ++G ++ L
Sbjct: 181 QYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR 240
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ M + ++ ++V+ A ++ E++ +G P TY +IN +C+
Sbjct: 241 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 300
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G KA ++F M ++G VV Y++++ K G++++ +L + +G P++ +Y
Sbjct: 301 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 360
Query: 274 NSLMDMHGRAKNL 286
N+L++ H + N+
Sbjct: 361 NALINSHSTSGNI 373
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 23/318 (7%)
Query: 4 QSKLHYYEKMKS-AGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
Q+ L +M+ GI + Y ++ + K+G ++ +F E + K ++ P + M
Sbjct: 162 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKPEAV-M 219
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L G+ L + M E+G+ + Y L+ + A EL +E
Sbjct: 220 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 279
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + L+ + +EG V+K LE+ E+M + + ++ SK+
Sbjct: 280 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 339
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
K++++ + +G P V Y ++IN++ G +A ++ EM++K V Y++++
Sbjct: 340 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 399
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
GR+ +A +L+ +M +G +P++ YN T+IS Y+M
Sbjct: 400 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYN-------------------TLISGYSMK 440
Query: 303 REFDMCVKFYNEFRMNGG 320
+ ++ NE MN G
Sbjct: 441 GDVKDALRIRNEM-MNKG 457
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 75/212 (35%), Gaps = 42/212 (19%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSS 59
N + L +E M G+ Y ++ A K G ++ LF E R + DL
Sbjct: 302 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV--- 358
Query: 60 THMYKILCDSLGKSG---RAFEIL--------------------------------KFFR 84
+Y L +S SG RAFEI+ K
Sbjct: 359 --LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 416
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M E+GI D Y +LI ++ +VK A + E KG L + L+ + G
Sbjct: 417 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 476
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ +V+ M + D ++ G +
Sbjct: 477 QGDDAENMVKEMVENGITPDDSTYISLIEGLT 508
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 6/276 (2%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
S + +++MK G+ + Y I+ ++K+G EK L E + + LT + Y
Sbjct: 247 DSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALT---VYTY 303
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L +GK+G+ E F +M ++G D + +LI + A +LF+E E
Sbjct: 304 TELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMES 363
Query: 124 KGMLRDLEVFLKLVLMYIE-EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++ + ++ E + + E MK + S ++++GF K
Sbjct: 364 LQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVE 423
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK-GFDKCVVAYSSM 241
A+ + E++ +G P Y S+INA + Y A ++F E+++ G+ V Y+ M
Sbjct: 424 KALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARV-YAVM 482
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ GK GR+ +A+ L +MK GC P+V+ YN+LM
Sbjct: 483 IKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALM 518
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 120/243 (49%), Gaps = 11/243 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+YEKMK G+V S Y +++ F K EK L E + + P++ Y L +
Sbjct: 393 WYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAA---YCSLIN 449
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+LGK+ R + F++++E VYA +I + A +LF E ++ G
Sbjct: 450 ALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNP 509
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMK----NAELNISDCISCVIVNGFSKRRAYWAA 184
D+ + L+ + GM ++ ++ +M+ +LN + +I+NGF++ A
Sbjct: 510 DVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHN----IILNGFARTGGPKGA 565
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++++ ++ + P V+Y +++ R G++ +A K+ EM KGF+ ++ YSS++
Sbjct: 566 IEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEA 625
Query: 245 YGK 247
GK
Sbjct: 626 VGK 628
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 158/350 (45%), Gaps = 21/350 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M + V+ +I++ K K ++F + + RK T S+T+ IL L
Sbjct: 148 QEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPT-SNTYNSMILM--L 204
Query: 71 GKSGRAFEILKFFRDMKEKG-ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G ++ + + +M +G L D Y++LI +F + A LF E +E G+
Sbjct: 205 MQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPT 264
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+++ ++ +Y + G VEK L +V+ MK ++ ++ G K A ++
Sbjct: 265 AKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFM 324
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKT 248
++ +GC P V ++IN + G + A K+F EM+ VV Y++++ A++
Sbjct: 325 NMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESK 384
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----KNLRQLEK------------Y 292
R +A KMK G P+ + Y+ L+D + K L LE+ Y
Sbjct: 385 ARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAY 444
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++I+A A+ ++ + + E R N G + +M+ K ++ E
Sbjct: 445 CSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSE 494
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 140/304 (46%), Gaps = 22/304 (7%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S+T+M I C L ++G E+ K ++M + P+ + ++ V A +
Sbjct: 124 STTYMALIHC--LDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSI 181
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFS 176
F + + + + ++LM ++EG EK E+ M N + D ++ ++ F
Sbjct: 182 FYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFG 241
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K +A+ +++++ G P Y +I+ Y ++G KA + EM++KG V
Sbjct: 242 KLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVY 301
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
Y+ ++ GK G++ +A + M +GC+P+V + N+L+++ G+A L K
Sbjct: 302 TYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEM 361
Query: 292 -----------YTTVISAY--NMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
Y TVI A + AR + + +Y + + NG V I++ F K +
Sbjct: 362 ESLQCTPNVVTYNTVIKALFESKARASEAFL-WYEKMKENGVVPSSFTYSILIDGFCKTN 420
Query: 339 QIEE 342
++E+
Sbjct: 421 RVEK 424
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 2/273 (0%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M+S + Y +++A ++ + + FL E K + S+ Y IL D
Sbjct: 358 FEEMESLQCTPNVVTYNTVIKALFE--SKARASEAFLWYEKMKENGVVPSSFTYSILIDG 415
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ R + L +M EKG P+ Y SLI + + A ELF+E E
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSS 475
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V+ ++ + G + + +++ MK N +++G + A +
Sbjct: 476 ARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLR 535
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ GC P ++ I+N + R G A ++F M+ VV+Y++++ + G
Sbjct: 536 TMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAG 595
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+A +L+ +M KG E ++ Y+S+++ G+
Sbjct: 596 MFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 147/335 (43%), Gaps = 24/335 (7%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTH 61
+ L ++MK G L Y ++++ K G E+ ++F+ E K D+
Sbjct: 282 EKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVV----- 336
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICS-FASIAEVKVAEELFKE 120
+ L + LGK+GR + +K F +M+ + Y ++I + F S A A +++
Sbjct: 337 LINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEK 396
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G++ + L+ + + VEK L ++E M C ++N K +
Sbjct: 397 MKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKR 456
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
Y AA +++++L YA +I + G S+A +F EM++ G + V AY++
Sbjct: 457 YEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNA 516
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------------MHGRAKNLR 287
+++ + G +A L+ M+ GC P++ +N +++ M R KN +
Sbjct: 517 LMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSK 576
Query: 288 ---QLEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ Y TV+ + A F+ K E G
Sbjct: 577 IKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKG 611
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 120/270 (44%), Gaps = 3/270 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+S G+ D + ++ K G ++ + LF E R L P+ + L D K
Sbjct: 309 MESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGL--VPNGV-TFTTLIDGQCK 365
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G+ LK F+ M +G+ D Y +LI + ++K A L E G+ D
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKIT 425
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F L+ ++G +E LE+ M + + D +++G + A ++ ++
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G P TY +I+ +C+ G K+ EMQ G VV Y++++ K G+++
Sbjct: 486 SAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMK 545
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+A L+ M G PN YN L+D H +
Sbjct: 546 NAKMLLDAMLNVGVAPNDITYNILLDGHSK 575
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 126/300 (42%), Gaps = 21/300 (7%)
Query: 39 EKVAALFLECESRKLDLT-PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
E+ AL+LE LD P + + +L K+G F ++ ++G+
Sbjct: 230 ERSWALYLEV----LDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVS 285
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ +LI +V+ L E +G+ D+ F L+ +EG +++ + + M
Sbjct: 286 FNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMC 345
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
L + +++G K A+K ++ +++QG P VTY ++IN C++G
Sbjct: 346 GRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLK 405
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A ++ EM G + +++++ K G + A+ + +M +G E + + +L+
Sbjct: 406 EARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALI 465
Query: 278 D-------MHGRAKNLRQL---------EKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
+H + L + YT VI + + M K E + +G V
Sbjct: 466 SGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHV 525
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 131/275 (47%), Gaps = 5/275 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM-Y 63
+ L + M+ G + ++ Y +I++ GD EK LF + L + P T + Y
Sbjct: 391 TALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF----EKMLKMGPLPTVVTY 446
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + G + MKE G D Y L+ F+ +++ A F+E E
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 506
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ + + L+ + ++G V+ L +++ M+ N + ++NG SK +
Sbjct: 507 CGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSE 566
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K+ ++++ QG +P +TY ++I+ CR G A K+F +M+++ + YSS++
Sbjct: 567 AEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 626
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ G+ +A L+ +M+ KG P+ + SL+D
Sbjct: 627 GLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 661
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 18/246 (7%)
Query: 47 ECESRKLDLT-------------PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
C +R LDL P+S Y L + L GR E L +M EKGI
Sbjct: 243 HCRNRNLDLAFGVFDRMVKEGCDPNSV-TYSTLINGLCNEGRVDEALDMLEEMIEKGI-- 299
Query: 94 DPSVYASL--ICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
+P+VY I + +I + A EL +++G +++ + L+ G +E +
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+ M L + ++N + A+K++ + G + TY II C
Sbjct: 360 LYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLC 419
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
G KA +F +M + G VV Y++++ Y G + +A RL+ MK GCEP+ W
Sbjct: 420 LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEW 479
Query: 272 IYNSLM 277
YN L+
Sbjct: 480 TYNELV 485
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 106/234 (45%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ Y L L + G+ + + M ++G++ + Y +LI A ++
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F E G L + + + +++ G +EK + + E M + ++NG+
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ + + GC P + TY +++ + + G A F EM + G + V+
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 515
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
Y++++ + K G++ A+ L+ +M+ GC PNV YN++++ + + EK
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 118/268 (44%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y KM G+V ++ Y ++ G +F E + ++T Y +
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG---SLANTQTYNEIIKG 417
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L G + + F M + G L Y +LI + + V A L +E G D
Sbjct: 418 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ +LV + + G +E + M LN + +++G SK A+ + +
Sbjct: 478 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ GC P +Y ++IN + +S+AEK+ +M ++G V+ Y++++ + G
Sbjct: 538 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG 597
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R + A ++ M+ + C PN++ Y+SL+
Sbjct: 598 RTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 8/207 (3%)
Query: 96 SVYA--SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
S+Y+ +L+ A V+ A L+K+ G+ L F L+ + ++G V + ++
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELIL 221
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ +L+ ++ G + R A V+++++ +GC P VTY+++IN C
Sbjct: 222 SQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNE 281
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G +A + EM +KG + V Y+ + +A+ LVA+MK +GC PNV Y
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 341
Query: 274 NSLMDMHGRAKNLRQLEKYTTVISAYN 300
+L+ L +L K I Y+
Sbjct: 342 TALIS------GLSRLGKLEVAIGLYH 362
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M+++G++ + Y +M+ + KI +K L+ E L P+ + IL D
Sbjct: 251 FRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGD--GLLPNVV-TFGILIDG 307
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ KF DM G++ + VY LI + + A L E E+ +L D
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ +E+ +++ MK + +++G+ K A++V
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+ +G P +T++++I+ YC+ G A ++ EM KG VVAY++++ + K G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++A RL +M+ G PNV+ + L+D
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLID 516
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 136/281 (48%), Gaps = 17/281 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y M + G + Y +++ + GD K LF E +K+ T +Y IL
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT---VVIYTILIRG 237
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L R E FR M+ G+L + Y +++ + IA VK A EL++E G+L +
Sbjct: 238 LCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPN 297
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMK----NAELNISDCI---SCVIVNGFSKRRAYW 182
+ F L+ +G+ KT E+V + K A + I +C+I +G+ K
Sbjct: 298 VVTFGILI-----DGLC-KTDEMVSARKFLIDMASFGVVPNIFVYNCLI-DGYCKAGNLS 350
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ ++ ++ +P TY+ +I C + +A+ + EM++KGF V Y++++
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y K G + A+ + ++M KG EPN+ +++L+D + +A
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 131/284 (46%), Gaps = 16/284 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y++M G++ + + +++ K E V+A + + P+ +Y L
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKT--DEMVSARKFLIDMASFGVVPN-IFVYNCL 339
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D K+G E L ++++ IL D Y+ LI + ++ A+ L +E ++KG
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L + + L+ Y +EG +EK +EV M + + +++G+ K AA+
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+Y +++ +G +P V Y ++I+ + + G +A ++ EMQ+ G V S ++
Sbjct: 460 LYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519
Query: 247 KTGRIRDAMRL-------------VAKMKPKGCEPNVWIYNSLM 277
K GRI DA++L ++ C PN +Y +L+
Sbjct: 520 KDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 131 EVFLKLVLMYIEEGMVEKTL------EVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
VF L++ + E G+VE+ L +V+ +M+ + +++G K+ +
Sbjct: 127 NVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNM---------VLDGLVKKGRFDTM 177
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
KVY ++++G P VTY ++I+ CR G + KA ++F EM +K VV Y+ ++
Sbjct: 178 WKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRG 237
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKY 292
RI +A + M+ G PN++ YN++MD + + ++++ LE Y
Sbjct: 238 LCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 16/288 (5%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L + +++ I+ D Y +++ + E+ L E +K P++
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE--MKKKGFLPNAV- 404
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D K G + ++ M EKGI + +++LI + +++ A L+ E
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
KG+L D+ + L+ + ++G ++ + + M+ A L+ + +++G K
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524
Query: 182 WAAVKVY-------------EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
A+K++ +L C P V Y ++I C G KA K F +M+
Sbjct: 525 SDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRC 584
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
G V ++ + + +RD M L A + G PN +Y L
Sbjct: 585 SGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
K+D+ P+ +L D L K GR + K + DM +G + Y +LI +
Sbjct: 151 KMDVLPAMQACNMVL-DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A LF E EK + + ++ L+ E + + + +M+N+
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNS------------ 257
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
G +P TY ++++ YC+I KA +++ EM G
Sbjct: 258 -----------------------GMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGL 294
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
VV + ++ KT + A + + M G PN+++YN L+D + +A NL +
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 143/315 (45%), Gaps = 23/315 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M+ GI D + ++ YK G E L + L L P + ++ I
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV--LGLLPDRS-LFDISVSG 240
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L +GR E ++F DM EKG+ + S+I +++ A E +K G+
Sbjct: 241 LCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPS 300
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L++ G +++ E++ M L++++ V+++ F KR A ++
Sbjct: 301 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 360
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P V +++ I+ + GL +A VF+EM +KG AY+S++ + K G
Sbjct: 361 EMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCG 420
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSL-----------------MDMHGRAKNLRQLEKY 292
++ +A++L M+ +G P+++ N + MDMH + + Y
Sbjct: 421 KLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLS-PDIITY 479
Query: 293 TTVISAYNMAREFDM 307
T+I+ Y + FDM
Sbjct: 480 NTLINGY--CKAFDM 492
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 3/227 (1%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
LTPS + +L L +GR E + M EKG+ + + L+ F +V A
Sbjct: 297 LTPSPSTCSSLLM-GLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGA 355
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+ L+ E E +G+ D+ F + ++G+VE+ V M L ++ ++ G
Sbjct: 356 QSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICG 415
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K A+K+ + + +G +P T II C+ G A VF++M Q G
Sbjct: 416 FCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPD 475
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ Y++++ Y K + +A LV +M G P++ YN + +HG
Sbjct: 476 IITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYN--IRIHG 520
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 106/237 (44%), Gaps = 3/237 (1%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
F+ L+ M+E G+ S A L + + +LFK+ +G F
Sbjct: 2 GFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSG 61
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
++L + +G + ++ M + +++N R A+ + +I +G
Sbjct: 62 IILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERG 121
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C P VT+ ++INA+C+ G +A K+F +++ GF + Y++++ Y K I A
Sbjct: 122 CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQAN 181
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEKYTTVISAYNMAREFDMCV 309
L +M+ KG P+ +N L+ H GR ++ +L K +V+ FD+ V
Sbjct: 182 MLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISV 238
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ + ++ K G E K F +KE G + +Y +L+ + + E+ A L++E
Sbjct: 129 FNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMR 188
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+KG+ D F LV + + G E +++ + L + + V+G
Sbjct: 189 KKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLD 248
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ ++ +G P + + S+I AY + GL KA + + M G SS++
Sbjct: 249 EAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLL 308
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR+++A L+ +M KG N + L+D
Sbjct: 309 MGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 344
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 105/266 (39%), Gaps = 45/266 (16%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G+ +++ + +++ F+K GD +L+ E E R + P + D L
Sbjct: 326 QMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR--GIFPDVV-AFSAFIDGLS 382
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G E F +M KG++ + Y SLIC F ++ A +L K +G+L D+
Sbjct: 383 KQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIF 442
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ +I+ G K+ +A+ V+ +
Sbjct: 443 T-----------------------------------TNMIIGGLCKQGRMRSAINVFMDM 467
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
G P +TY ++IN YC+ A+ + M G + + Y+ + + + R+
Sbjct: 468 HQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRM 527
Query: 252 RDAMRLVAKMKPKG-------CEPNV 270
A+ ++ ++ G C P +
Sbjct: 528 NRAVLMLDELVSAGILSFSFACPPTL 553
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 123/301 (40%), Gaps = 44/301 (14%)
Query: 18 IVLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
++++ GC + ++ AF K G+ + LF +++ +P++ MY L +
Sbjct: 116 LMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL--KEMGFSPNAI-MYNTLMNGYV 172
Query: 72 KSGRAFEILKFFRDMKEKGI-----------------------------------LEDPS 96
K + + +M++KGI L D S
Sbjct: 173 KMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRS 232
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
++ + + A E + EKG+ + F ++ Y + G+ +K E + M
Sbjct: 233 LFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLM 292
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ L S ++ G S A ++ Q+I +G + + +++ + + G
Sbjct: 293 VHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDV 352
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A+ ++ EM+++G VVA+S+ + K G + +A + +M KG PN + YNSL
Sbjct: 353 VGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSL 412
Query: 277 M 277
+
Sbjct: 413 I 413
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 16/211 (7%)
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ LE++ M+ + S ++ + Y K+++ +I +G P + T++ II
Sbjct: 4 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
+CR G E + M + + AY+ ++ GR DA+ M +GC
Sbjct: 64 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123
Query: 268 PNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKF 311
P V +N++++ + N+ + K Y T+++ Y RE D
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183
Query: 312 YNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y E R G D I+V K + E+
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREED 214
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 107/245 (43%), Gaps = 5/245 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ ++ GR + L +F M E+G + ++I +F V A +LF +
Sbjct: 94 YNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLK 153
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G + ++ L+ Y++ +++ + E M+ + ++V+G K
Sbjct: 154 EMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREE 213
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ + + G +P + + ++ C G +A + ++M +KG ++A++S++
Sbjct: 214 DGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVI 273
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRAKNLRQL--EKYTTVIS 297
A Y + G A M G P+ +SL + ++GR + +L + +S
Sbjct: 274 AAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLS 333
Query: 298 AYNMA 302
NMA
Sbjct: 334 VNNMA 338
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 128/271 (47%), Gaps = 6/271 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ K GD + L + E+ K++ ++ +Y + DSL K + L F
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIE---ANVVIYSTVIDSLCKYRHEDDALNLFT 284
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M+ KG+ + Y+SLI + A L + E+ + ++ F L+ +++EG
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ + ++ + M ++ ++NGF A ++E +IS+ C P VTY
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++IN +C+ + ++F EM Q+G V Y++++ + + +A + +M
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
G PN+ YN+L+D G KN +LEK V
Sbjct: 465 GVHPNIMTYNTLLD--GLCKN-GKLEKAMVV 492
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 125/271 (46%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ + +M++ G+ + Y ++ + L + RK++ + + L
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN---PNVVTFNAL 336
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K G+ E K + +M ++ I D Y+SLI F + A+ +F+ K
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L+ + + +++ +E+ M L + +++GF + R A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++Q++S G P +TY ++++ C+ G KA VF +Q+ + + Y+ M+
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++ D L + KG +P+V IYN+++
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 149/327 (45%), Gaps = 19/327 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
EKM+ GI + Y ++ F + S+ AL L + KL PS + +L +
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCR--RSQISLALALLGKMMKLGYEPSIVTLSSLL-NGY 165
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
R + + M E G D + +LI + A L ++G +L
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V + G ++ ++ M+ A++ + I +++ K R A+ ++ +
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ ++G P +TY+S+I+ C +S A ++ +M ++ + VV +++++ + K G+
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGR---AKNLRQLE----------KYTT 294
+ +A +L +M + +P+++ Y+SL++ MH R AK++ +L Y T
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGV 321
+I+ + A+ D V+ + E G V
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLV 432
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 84/168 (50%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K+ R E ++ FR+M ++G++ + Y +LI F + A+ +FK+
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ ++ + L+ + G +EK + V E ++ +++ + +++ G K
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ L +G P + Y ++I+ +CR GL +A+ +F +M++ G
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 95 PSVY--ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
PS++ L+ + A + + + L ++ + G+ +L + L+ + + L +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ M S ++NG+ + AV + +Q++ G P +T+ ++I+
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
S+A + M Q+G +V Y +V K G I A L+ KM+ E NV I
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 273 YNSLMD 278
Y++++D
Sbjct: 263 YSTVID 268
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 150/344 (43%), Gaps = 19/344 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ MK G V D Y +++ K GD + ++ E + +TP+ Y L
Sbjct: 306 FDGMKKCGFVPDVHSYSILVDGLCKQGDV--LTGYYMLVEMARNGITPNLVS-YSSLLHG 362
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++GR + F+ +K++G D VY+ ++ ++++ +L+ + + D
Sbjct: 363 LCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPD 422
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y +++ LEV E M + + ++V+GFS A +
Sbjct: 423 AYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLD 482
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ G +P TY IIN C++ + +F +M ++G+ V YS ++ + K
Sbjct: 483 KVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKAL 542
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YT 293
+++A RL KM +G +PN++ Y SL++ L ++ YT
Sbjct: 543 DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYT 602
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
++I+ Y ++ + E G D + ++G FSK+
Sbjct: 603 SLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKV 646
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 3/222 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ +K++ G+V + Y I+ K+ V +F + R P + +Y I+ D
Sbjct: 480 FLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGY--VPDTV-LYSIIID 536
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K+ E + + M ++G + Y SLI ++ LFK +G+
Sbjct: 537 GFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTP 596
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D ++ L+ Y + ++ LE+ M+ L+ + ++ GFSK A A
Sbjct: 597 DRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFM 656
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
E+++++G P VTY +I Y +IG KA ++ M Q G
Sbjct: 657 EEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAG 698
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 104/228 (45%), Gaps = 2/228 (0%)
Query: 42 AALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASL 101
A LFL+ + R+ + P+ Y+++ + L K + ++ F DM ++G + D +Y+ +
Sbjct: 477 AFLFLD-KVRQFGVVPNLC-TYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSII 534
Query: 102 ICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
I F +++ A L+ + ++G ++ + L+ + + + + + + M L
Sbjct: 535 IDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGL 594
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
+ ++ + KR AA++++ ++ ++G Y +I + ++ A+
Sbjct: 595 TPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQL 654
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
EM KG VV Y+ ++ Y K G + AM + M G P+
Sbjct: 655 FMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPD 702
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 93/222 (41%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P +++ + + G+ + ++ F MK+ G + D Y+ L+ +V
Sbjct: 280 PCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYY 339
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ E G+ +L + L+ G VE E+ + +K+ + ++++G
Sbjct: 340 MLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCC 399
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ ++ ++ +P Y+S+I AYCR +A +VF M G VV
Sbjct: 400 QHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVV 459
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +V + G I +A + K++ G PN+ Y +++
Sbjct: 460 TCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIIN 501
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G + + +A + L +G + ++I+ +C G KA +VF M++ GF
Sbjct: 257 GLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVP 316
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
V +YS +V K G + ++ +M G PN+ Y+SL +HG + R
Sbjct: 317 DVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSL--LHGLCRAGR 368
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
LTP +Y L K L+ FR+M+ +G+ D VY LI F+ + + A
Sbjct: 594 LTPDRI-LYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGA 652
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+ +E KG+ + + L++ Y + G +K + + SM A + +SC++
Sbjct: 653 QLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCIL 709
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 116/251 (46%), Gaps = 18/251 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + DSL K+ R + FF++++ KGI + Y +L+ + + A L +
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+K + ++ + L+ +++ G V + E+ E M ++ +VNG
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRID 312
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++ ++S+GC+ V+Y ++IN +C+ K+F EM Q+G V Y++++
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-----------------DMHGRAKN 285
+ + G + A ++M G P++W YN L+ DM R +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 286 LRQLEKYTTVI 296
L + YTTVI
Sbjct: 433 L-DIVTYTTVI 442
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 1/223 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TP+ Y L D+ K+G+ E + F +M I D Y+SL+ + A
Sbjct: 256 ITPNVIT-YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEA 314
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
++F KG L D+ + L+ + + VE +++ M L + ++ G
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F + A + + Q+ G P TY ++ C G KA +F +MQ++ D
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+V Y++++ KTG++ +A L + KG +P++ Y ++M
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K+ R + +K FR+M ++G++ + Y +LI F +V A+E F + +
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ + L+ + G +EK L + E M+ E+++ ++ G K
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ L +G P VTY ++++ C GL + E ++ +M+Q+G K S
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD-- 510
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
G I + L+ KM G P++
Sbjct: 511 ------GDITLSAELIKKMLSCGYAPSL 532
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 118/293 (40%), Gaps = 51/293 (17%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + + R + + M E G D Y ++I S V A + FKE E KG
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ ++ + LV NG + A
Sbjct: 221 IRPNVVTYTALV-----------------------------------NGLCNSSRWSDAA 245
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++ +I + P +TY+++++A+ + G +A+++F EM + D +V YSS+V
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK------- 291
RI +A ++ M KGC +V YN+L++ +AK + R++ +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y T+I + A + D +F+++ G D I++G ++E+
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N F A+ + +++ G P +VT S++N +CR S A + +M +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G+ +VAY++++ KT R+ DA +++ KG PNV Y +L++
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 3/163 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + + +M G+V ++ Y +++ F++ GD +K F + + ++P Y
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF--FGISP-DIWTY 403
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL L +G + L F DM+++ + D Y ++I +V+ A LF
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC 166
KG+ D+ + ++ +G++ + + MK L +DC
Sbjct: 464 KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
T+ +IN +C S A + +M + G++ V S+V + + R+ DA+ LV KM
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G +P++ YN+++D + K +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVND 208
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG++ + DM +KG+ D ++ +I S+ V+ + +LF++ EE G+ R
Sbjct: 55 LGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKAGIVQESVKLFQKMEELGVERT 114
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ + L + G + M N + + V++ GF A + +E
Sbjct: 115 IKSYDALFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFE 174
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ S+ P +TY ++IN Y R+ +AEK F+EM+++ D VV Y++++ Y
Sbjct: 175 DMKSREITPDVITYNTMINGYNRVKKMEEAEKYFLEMKERKIDPTVVTYTTLIKGYASVD 234
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R+ DA+RLV +MK G +PN Y++L+
Sbjct: 235 RVDDALRLVEEMKGLGIKPNAITYSTLL 262
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 1/226 (0%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
M+ ++ DS GK+G E +K F+ M+E G+ Y +L + +++ F +
Sbjct: 82 MWVMMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKM 141
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ F L+ + G VE E MK+ E+ ++NG+++ +
Sbjct: 142 VNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREITPDVITYNTMINGYNRVKKM 201
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K + ++ + P VTY ++I Y + A ++ EM+ G + YS++
Sbjct: 202 EEAEKYFLEMKERKIDPTVVTYTTLIKGYASVDRVDDALRLVEEMKGLGIKPNAITYSTL 261
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEP-NVWIYNSLMDMHGRAKNL 286
+ ++ +A ++ +M K P + I+ L+ +A NL
Sbjct: 262 LPGLCNAEKMSEARSILKEMVDKYVAPTDNSIFMRLISSQCKAGNL 307
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 88/205 (42%), Gaps = 1/205 (0%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ H + +L SG+ +FF DMK + I D Y ++I + + +++ AE+
Sbjct: 148 PTRHTFNVLIWGFFLSGKVETANRFFEDMKSREITPDVITYNTMINGYNRVKKMEEAEKY 207
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F E +E+ + + + L+ Y V+ L +VE MK + + ++ G
Sbjct: 208 FLEMKERKIDPTVVTYTTLIKGYASVDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCN 267
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVT-YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
A + ++++ + P + + +I++ C+ G A V M +
Sbjct: 268 AEKMSEARSILKEMVDKYVAPTDNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAG 327
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKM 261
Y ++ Y K G+ A++L+ K+
Sbjct: 328 HYGVLIEYYCKAGQYDKAVKLLDKL 352
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 61/131 (46%), Gaps = 18/131 (13%)
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
+ +I++Y + G+ ++ K+F +M++ G ++ + +Y ++ + + GR + R KM
Sbjct: 83 WVMMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKMV 142
Query: 263 PKGCEPNVWIYNSLM-----------------DMHGRAKNLRQLEKYTTVISAYNMAREF 305
+G EP +N L+ DM R + Y T+I+ YN ++
Sbjct: 143 NEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREIT-PDVITYNTMINGYNRVKKM 201
Query: 306 DMCVKFYNEFR 316
+ K++ E +
Sbjct: 202 EEAEKYFLEMK 212
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L L KS + L FF+DM G+ Y +I A +++ A LF+E + KG
Sbjct: 222 LLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKG 281
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D+ + L+ Y + GM+ + V E MK+A ++N F K A
Sbjct: 282 LRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAF 341
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ + +G P VTY+++I+A+C+ G+ +A K F++M + G Y+S++
Sbjct: 342 EYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDAN 401
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
K G + +A +L ++M+ G N+ Y +L+D +R+ E+
Sbjct: 402 CKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEE 447
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 5/277 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y MK G+ + Y +++AF K G + F++ ++ L P+ Y L D
Sbjct: 343 YLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVD--MIRVGLQPNE-FTYTSLID 399
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ K G E K +M++ G+ + Y +L+ ++ AEELF + G
Sbjct: 400 ANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTL 459
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ +++ L YI+ M+EK ++++E M L + + G ++ ++ V
Sbjct: 460 NQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVI 519
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ G Y ++I+AY ++G ++A + EMQ G VV Y ++ K
Sbjct: 520 REMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKI 579
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
G ++ A+R M G +PN+ IY +L+D G KN
Sbjct: 580 GLVQQAVRYFDHMTRNGLQPNIMIYTALID--GLCKN 614
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 4/246 (1%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L+PS Y ++ L + G F +MK KG+ D Y SLI + + + A
Sbjct: 247 LSPS-VFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGA 305
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+F+E ++ G D+ + L+ + + + + E + MK L + +++
Sbjct: 306 VSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDA 365
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K A K + +I G P + TY S+I+A C+IG ++A K+ EMQQ G +
Sbjct: 366 FCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLN 425
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTT 294
+V Y++++ + GR+R+A L + G N IY SL HG K + +EK
Sbjct: 426 IVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSL--FHGYIKA-KMMEKAMD 482
Query: 295 VISAYN 300
++ N
Sbjct: 483 ILEEMN 488
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 153/350 (43%), Gaps = 19/350 (5%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ M G+ + Y +++A KIGD + L E + ++L + Y L D
Sbjct: 378 FFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVT---YTALLD 434
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L + GR E + F + + G + +Y SL + ++ A ++ +E +K +
Sbjct: 435 GLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKP 494
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
DL ++ + + +E ++ V+ M + L + I +++ + K AV +
Sbjct: 495 DLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLL 554
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ G VTY +I+ C+IGL +A + F M + G ++ Y++++ K
Sbjct: 555 QEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKN 614
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH------GRAKNLRQ----------LEKY 292
+ +A L +M KG P+ +Y SL+D + G A +LR L Y
Sbjct: 615 DCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAY 674
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
T++I ++ + + +E G + D+ + ++ + +L I E
Sbjct: 675 TSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINE 724
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 104/220 (47%), Gaps = 3/220 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G+ +S Y +++A++K+G + + L E + + +T + Y +L D L
Sbjct: 521 EMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVT---YGVLIDGLC 577
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G + +++F M G+ + +Y +LI ++ A+ LF E +KG+ D
Sbjct: 578 KIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKL 637
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
V+ L+ ++ G + L + M + + C ++ GFS+ A + +++
Sbjct: 638 VYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEM 697
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ +G IP QV ++ Y +G ++A + +M ++G
Sbjct: 698 LRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGL 737
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-IVNGFSKRRAYWAAVKVYEQ 190
VF L + ++ GM+E+ + M + + SC +++ SK A+ ++
Sbjct: 183 VFDTLFNVLVDLGMLEEARQCFWKMNKFRV-LPKVRSCNELLHRLSKSSKGGLALSFFKD 241
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G P TY +I R G A +F EM+ KG +V Y+S++ YGK G
Sbjct: 242 MVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGM 301
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+ A+ + +MK GCEP+V YNSL++ + + + Q +Y
Sbjct: 302 LTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEY 343
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 120/271 (44%), Gaps = 3/271 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MK+ G+ D Y +++ + K+G ++F E + + Y L +
Sbjct: 274 FEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCE---PDVITYNSLINC 330
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K R + ++ MK++G+ + Y++LI +F + A + F + G+ +
Sbjct: 331 FCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPN 390
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G + + ++ M+ A +N++ +++G + A +++
Sbjct: 391 EFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFG 450
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L+ G Q Y S+ + Y + + KA + EM +K ++ Y + + +
Sbjct: 451 ALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQN 510
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
I D+M ++ +M G N +IY +L+D +
Sbjct: 511 EIEDSMAVIREMMDCGLTANSYIYTTLIDAY 541
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 88/208 (42%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+++++Y L D+ K G+ E + ++M++ GI Y LI I V+ A
Sbjct: 529 ANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRY 588
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F G+ ++ ++ L+ + +E+ + M + ++ + +++G K
Sbjct: 589 FDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMK 648
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A+ + +++ G Y S+I + R G A+ + EM +KG V
Sbjct: 649 HGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVL 708
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
++ Y + G I +A+ L M +G
Sbjct: 709 CICLLRKYYELGDINEALALHDDMARRG 736
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y + LG++ + I K M + G + Y LI S+ + A ++F E
Sbjct: 381 HTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNE 440
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ G D + L+ ++ + G ++ LE+ + M+ A L+ VI+N K
Sbjct: 441 MQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGH 500
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AA K++ +++ QGC+P VTY +I + Y A K++ +MQ GF V YS
Sbjct: 501 LAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSI 560
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
++ + G G + +A + ++MK K P+ +Y L+D+ G+A N+ + ++ +
Sbjct: 561 VMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTG 620
Query: 301 MAREFDMCVKFYNEF 315
+ C + F
Sbjct: 621 LRPNVPTCNSLLSAF 635
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 20/264 (7%)
Query: 80 LKFFRDMK-EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
L FF +K + G D Y +++ + +L + + G ++ + +L+
Sbjct: 364 LNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIH 423
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
Y + ++V M+ C +++ +K A+++Y+++ + G P
Sbjct: 424 SYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSP 483
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
TY+ IIN + G + A K+F EM ++G +V Y+ M+A+ K + A++L
Sbjct: 484 DTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLY 543
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMN 318
M+ G +P+ Y+ +M++ G L + E ++E +
Sbjct: 544 RDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAE-------------------AVFSEMKRK 584
Query: 319 GGVIDRAMAGIMVGVFSKLSQIEE 342
V D + G++V ++ K +E+
Sbjct: 585 NWVPDEPVYGLLVDLWGKAGNVEK 608
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 7/204 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y++M++AG+ D+ Y I+ K G LF CE + P+ Y I+
Sbjct: 470 LEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLF--CEMVEQGCVPNLV-TYNIM 526
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
K+ LK +RDM+ G D Y+ ++ + AE +F E + K
Sbjct: 527 IALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNW 586
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCVIVNGFSKRRAYWAA 184
+ D V+ LV ++ + G VEK + ++M N L N+ C S +++ F + A
Sbjct: 587 VPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNS--LLSAFLRVHKLADA 644
Query: 185 VKVYEQLISQGCIPGQVTYASIIN 208
+ + ++ G P TY +++
Sbjct: 645 YNLLQSMLELGLNPSLQTYTLLLS 668
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ G D YC +++ K G + ++ ++ L T Y ++ +
Sbjct: 438 FNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLS---PDTFTYSVIINC 494
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LGK+G K F +M E+G + + Y +I A + A +L+++ + G D
Sbjct: 495 LGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPD 554
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + G +++ V MK + + ++V+ + K A + Y+
Sbjct: 555 KVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQ 614
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+++ G P T S+++A+ R+ + A + M + G + + Y+ +++
Sbjct: 615 TMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLLS 668
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N QS L Y M+SAG D Y +ME G ++ A+F E ++ + P
Sbjct: 535 NYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVF--SEMKRKNWVPDEP- 591
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D GK+G + ++++ M G+ + SL+ +F + ++ A L +
Sbjct: 592 VYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSM 651
Query: 122 EEKGMLRDLEVFLKLV 137
E G+ L+ + L+
Sbjct: 652 LELGLNPSLQTYTLLL 667
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 134/284 (47%), Gaps = 5/284 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E++K+ V D+ Y ++ K G + + LF + + L T Y I+ D
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL---DTRAYNIVIDG 596
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G+ + + +MK KG Y S+I A I + A LF+EA+ K + +
Sbjct: 597 FCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ L+ + + G +++ ++E + L + +++ K A+ ++
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ C P QVTY +IN C++ ++KA + EMQ++G ++Y++M++ K G
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYT 293
I +A L + K G P+ YN++++ G + R ++ ++
Sbjct: 777 NIAEAGALFDRFKANGGVPDSACYNAMIE--GLSNGNRAMDAFS 818
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 158/352 (44%), Gaps = 25/352 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+E+M D +C +++ K+G D+ KV L+ + R +++ +Y L
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR------TNSIVYTSL 488
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ GR + K ++DM + D + + + E + +F+E + +
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D + L+ I+ G +T E+ SMK + ++++GF K A +
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ E++ ++G P VTY S+I+ +I +A +F E + K + VV YSS++ +G
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------KNLRQLE------ 290
K GRI +A ++ ++ KG PN++ +NSL+D +A +++++L+
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y +I+ R+F+ F+ E + G M+ +K I E
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 3/211 (1%)
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
C K +++++ R K + S Y +LI +F+++ + LF++ +E G
Sbjct: 143 CVKANKLREGYDVVQMMRKFKFRPAF---SAYTTLIGAFSAVNHSDMMLTLFQQMQELGY 199
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ +F L+ + +EG V+ L +++ MK++ L+ + V ++ F K A K
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 259
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ + G P +VTY S+I C+ +A ++F +++ C AY++M+ YG
Sbjct: 260 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 319
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G+ +A L+ + + KG P+V YN ++
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 3/253 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G VLD+ Y +++ F K G K L E +++ + T + Y + D L K
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT---YGSVIDGLAK 634
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R E F + K K I + +Y+SLI F + + A + +E +KG+ +L
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ ++ + + L +SMK + + +++NG K R + A ++++
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
QG P ++Y ++I+ + G ++A +F + G Y++M+ R
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAM 814
Query: 253 DAMRLVAKMKPKG 265
DA L + + +G
Sbjct: 815 DAFSLFEETRRRG 827
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 6/283 (2%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
+S L +++M+ G + ++ F K G + +L E +S LD +
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLD---ADI 238
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+Y + DS GK G+ KFF +++ G+ D Y S+I + A E+F+
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRR 179
E+ + + +++ Y G ++ ++E + A+ +I I+ I+ K
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR-AKGSIPSVIAYNCILTCLRKMG 357
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+KV+E++ + P TY +I+ CR G A ++ MQ+ G V +
Sbjct: 358 KVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVN 416
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
MV K+ ++ +A + +M K C P+ + SL+D G+
Sbjct: 417 IMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 134/320 (41%), Gaps = 47/320 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+ ++ G + Y I+ K+G ++ +F E K D P+ + Y IL D L
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF---EEMKKDAAPNLS-TYNILIDML 387
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G+ + M++ G+ + ++ ++ A +F+E + K D
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ + G V+ +V E M +++ + + ++ F K+Y+
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 191 LISQGC-----------------------------------IPGQVTYASIINAYCRIGL 215
+I+Q C +P +Y+ +I+ + G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 216 YSKAEKVFIEMQQKGFDKCVV---AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
++ ++F M+++G CV+ AY+ ++ + K G++ A +L+ +MK KG EP V
Sbjct: 568 ANETYELFYSMKEQG---CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 273 YNSLMDMHGRAKNLRQLEKY 292
Y S++D G AK R E Y
Sbjct: 625 YGSVID--GLAKIDRLDEAY 642
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/284 (18%), Positives = 113/284 (39%), Gaps = 18/284 (6%)
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
RA E +++ E + P Y SL+ A +++ E G + +
Sbjct: 80 RAIEYFRWYERRTE--LPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCI 137
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
++VL ++ + + +VV+ M+ + + ++ FS + +++Q+
Sbjct: 138 EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G P + ++I + + G A + EM+ D +V Y+ + +GK G++ A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK---------YTTVISA 298
+ +++ G +P+ Y S++ + +A L LEK Y T+I
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 299 YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y A +FD R G + ++ K+ +++E
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 136/270 (50%), Gaps = 9/270 (3%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL---CD 68
KMK GI + Y I+ F K G +E AA + E++++ T +++ KI+ C
Sbjct: 369 KMKEEGIEMSLVTYSVIVGGFSKAGHAE--AADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ RA ++ R+M+E+GI ++Y +++ + +A+ K +FK +E G
Sbjct: 427 TCNME-RAEALV---REMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ +Y + G + K LEV MK + + +++NGF K + + A V+
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E ++ +G P + Y +II+A+C +G +A + EMQ+ + ++ Y K+
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G +R ++ + M+ GC P V +N L++
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLIN 632
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 153/356 (42%), Gaps = 51/356 (14%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ GI Y +M+ + + D +K +F ++ TP+ Y L +
Sbjct: 439 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL--KECGFTPTVV-TYGCLINLYT 495
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ + L+ R MKE+G+ + Y+ +I F + + A +F++ ++GM D+
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
++ ++ + G +++ ++ V+ M+ + I++G++K +++V++ +
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 192 ISQGCIP--------------------------------GQVTYASIINAYCRIGLYSKA 219
GC+P + TY I+ Y +G KA
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 675
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ F +Q +G D + Y +++ K+GR++ A+ + +M + N ++YN L+D
Sbjct: 676 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 735
Query: 280 HGR-------AKNLRQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
R A ++Q++K YT+ ISA + A + + + E G
Sbjct: 736 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 791
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 117/254 (46%), Gaps = 6/254 (2%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
+ I+ + K GD + +F R+ P+ H + L + L + +A EIL
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMM--RRCGCVPT-VHTFNGLINGLVEKRQAVEILD-- 645
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+M G+ + Y ++ +AS+ + A E F + +G+ D+ + L+ +
Sbjct: 646 -EMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKS 704
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G ++ L V + M + + + ++++G+++R W A + +Q+ +G P TY
Sbjct: 705 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 764
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
S I+A + G ++A + EM+ G + Y++++ + + A+ +MK
Sbjct: 765 TSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA 824
Query: 264 KGCEPNVWIYNSLM 277
G +P+ +Y+ L+
Sbjct: 825 MGIKPDKAVYHCLL 838
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 28 IMEAFY-KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDM 86
+M FY + GD + F +R +TP+S +Y L + E L R M
Sbjct: 314 LMVKFYGRRGDMHRARETFERMRAR--GITPTS-RIYTSLIHAYAVGRDMDEALSCVRKM 370
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
KE+GI Y+ ++ F+ + A+ F EA+ + ++ K++ + + +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
E+ +V M+ ++ I +++G++ + V+++L G P VTY +
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
IN Y ++G SKA +V M+++G + YS M+ + K +A + M +G
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 267 EPNVWIYNSLM 277
+P+V +YN+++
Sbjct: 551 KPDVILYNNII 561
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 118/274 (43%), Gaps = 6/274 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M G+ D Y I+ AF +G+ ++ A+ E +KL P+ T + +
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDR--AIQTVKEMQKLRHRPT-TRTFMPIIHG 598
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KSG L+ F M+ G + + LI + E + A E+ E G+ +
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI---NGLVEKRQAVEILDEMTLAGVSAN 655
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ K++ Y G K E ++N L++ ++ K +A+ V +
Sbjct: 656 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 715
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ ++ Y +I+ + R G +A + +M+++G + Y+S ++ K G
Sbjct: 716 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 775
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ A + + +M+ G +PN+ Y +L+ RA
Sbjct: 776 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWARA 809
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++MK G+ D Y + A K GD + E E+ L + P+ Y L
Sbjct: 750 QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEA--LGVKPN-IKTYTTLIKGW 806
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSF---ASIAEVKVAEELF---KEAEEK 124
++ + L + +MK GI D +VY L+ S ASIAE + + KE E
Sbjct: 807 ARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEA 866
Query: 125 GMLRDL 130
G++ D+
Sbjct: 867 GLIVDM 872
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 6/275 (2%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S + +++MK G+ + Y I+ ++K+G EK L E + + LT + Y
Sbjct: 248 SAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALT---VYTYT 304
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L +GK+G+ E F +M ++G D + +LI + A +LF+E E
Sbjct: 305 ELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESL 364
Query: 125 GMLRDLEVFLKLVLMYIE-EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
++ + ++ E + + E MK + S ++++GF K
Sbjct: 365 QCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEK 424
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK-GFDKCVVAYSSMV 242
A+ + E++ +G P Y S+INA + Y A ++F E+++ G+ V Y+ M+
Sbjct: 425 ALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARV-YAVMI 483
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GK GR+ +A+ L +MK GC P+V+ YN+LM
Sbjct: 484 KHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALM 518
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 120/243 (49%), Gaps = 11/243 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+YEKMK G+V S Y +++ F K EK L E + + P++ Y L +
Sbjct: 393 WYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAA---YCSLIN 449
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+LGK+ R + F++++E VYA +I + A +LF E ++ G
Sbjct: 450 ALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNP 509
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMK----NAELNISDCISCVIVNGFSKRRAYWAA 184
D+ + L+ + GM ++ ++ +M+ +LN + +I+NGF++ A
Sbjct: 510 DVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHN----IILNGFARTGGPKGA 565
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++++ ++ + P V+Y +++ R G++ +A K+ EM KGF+ ++ YSS++
Sbjct: 566 IEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEA 625
Query: 245 YGK 247
GK
Sbjct: 626 VGK 628
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 158/350 (45%), Gaps = 21/350 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M + V+ +I++ K K ++F + + RK T S+T+ IL L
Sbjct: 148 QEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPT-SNTYNSMILM--L 204
Query: 71 GKSGRAFEILKFFRDMKEKG-ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G ++ + + +M +G L D Y++LI +F + A LF E +E G+
Sbjct: 205 MQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPT 264
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+++ ++ +Y + G VEK L +V+ MK ++ ++ G K A ++
Sbjct: 265 AKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFM 324
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKT 248
++ +GC P V ++IN + G + A K+F EM+ VV Y++++ A++
Sbjct: 325 NMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESK 384
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----KNLRQLEK------------Y 292
R +A KMK G P+ + Y+ L+D + K L LE+ Y
Sbjct: 385 ARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAY 444
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++I+A A+ ++ + + E R N G + +M+ K ++ E
Sbjct: 445 CSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSE 494
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 140/304 (46%), Gaps = 22/304 (7%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S+T+M I C L ++G E+ K ++M + P+ + ++ V A +
Sbjct: 124 STTYMALIHC--LDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSI 181
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFS 176
F + + + + ++LM ++EG EK E+ M N + D ++ ++ F
Sbjct: 182 FYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFG 241
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K +A+ +++++ G P Y +I+ Y ++G KA + EM++KG V
Sbjct: 242 KLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVY 301
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
Y+ ++ GK G++ +A + M +GC+P+V + N+L+++ G+A L K
Sbjct: 302 TYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEM 361
Query: 292 -----------YTTVISAY--NMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
Y TVI A + AR + + +Y + + NG V I++ F K +
Sbjct: 362 ESLQCTPNVVTYNTVIKALFESKARASEAFL-WYEKMKENGVVPSSFTYSILIDGFCKTN 420
Query: 339 QIEE 342
++E+
Sbjct: 421 RVEK 424
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 2/273 (0%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M+S + Y +++A ++ + + FL E K + S+ Y IL D
Sbjct: 358 FEEMESLQCTPNVVTYNTVIKALFE--SKARASEAFLWYEKMKENGVVPSSFTYSILIDG 415
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ R + L +M EKG P+ Y SLI + + A ELF+E E
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSS 475
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V+ ++ + G + + +++ MK N +++G + A +
Sbjct: 476 ARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLR 535
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ GC P ++ I+N + R G A ++F M+ VV+Y++++ + G
Sbjct: 536 TMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAG 595
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+A +L+ +M KG E ++ Y+S+++ G+
Sbjct: 596 MFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 147/335 (43%), Gaps = 24/335 (7%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTH 61
+ L ++MK G L Y ++++ K G E+ ++F+ E K D+
Sbjct: 282 EKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVV----- 336
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICS-FASIAEVKVAEELFKE 120
+ L + LGK+GR + +K F +M+ + Y ++I + F S A A +++
Sbjct: 337 LINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEK 396
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G++ + L+ + + VEK L ++E M C ++N K +
Sbjct: 397 MKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKR 456
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
Y AA +++++L YA +I + G S+A +F EM++ G + V AY++
Sbjct: 457 YEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNA 516
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------------MHGRAKNLR 287
+++ + G +A L+ M+ GC P++ +N +++ M R KN +
Sbjct: 517 LMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSK 576
Query: 288 ---QLEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ Y TV+ + A F+ K E G
Sbjct: 577 IKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKG 611
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 130/285 (45%), Gaps = 6/285 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M G D Y ++ K G+ + L + E K++ + +Y + DSL
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE---ADVVIYSTVIDSL 250
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + L F +M KGI D Y+SLI + A L + E+ + ++
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ + +EG + + ++ + M ++ + ++NGF A +++
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++S+ C+P VTY ++IN +C+ ++F +M ++G V Y++++ + +
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
+A + +M G PN+ YN+L+D G KN +LEK V
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLD--GLCKN-GKLEKAMVV 472
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 130/292 (44%), Gaps = 9/292 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ + +M + GI D Y ++ G + L + RK++ + + L
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN---PNVVTFNSL 316
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
D+ K G+ E K F +M ++ I DP++ Y SLI F + A+++F K
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSI--DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
L D+ + L+ + + V +E+ M L + +++GF + A
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V++Q++S G P +TY ++++ C+ G KA VF +Q+ + + Y+ M
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
K G++ D L + KG +P+V YN+++ G K + E YT I
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS--GFCKKGLKEEAYTLFI 544
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 115/249 (46%), Gaps = 6/249 (2%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
KL PS + +L + R E + M E G D + +L+ +
Sbjct: 128 KLGYGPSIVTLNSLL-NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 186
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A L + KG DL + ++ + G + L ++ M+ ++ I +
Sbjct: 187 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ K R A+ ++ ++ ++G P TY+S+I+ C G +S A ++ +M ++
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQ 288
+ VV ++S++ + K G++ +A +L +M + +PN+ YNSL++ MH R +Q
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 289 LEKYTTVIS 297
+ +T ++S
Sbjct: 367 I--FTLMVS 373
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S G+ + Y +++ K G EK +F + K++ + Y I+ +
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME---PDIYTYNIMSEG 494
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K+G+ + F + KG+ D Y ++I F + A LF + +E G L D
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+ L+ ++ +G + E+++ M++
Sbjct: 555 SGTYNTLIRAHLRDGDKAASAELIKEMRS 583
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 5/277 (1%)
Query: 4 QSKLHYYEKMKSAGI-VLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
+ L E+MK I ++ Y +++ F+K G+ ++ LF + + P+ +
Sbjct: 374 EDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQ--PNVITL 431
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
L D L K GR ++FF +MK KG+ + + Y +LI +F + + A + F+E
Sbjct: 432 -NTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEML 490
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G D V+ L+ G + VV +K A ++ V+++GF K++
Sbjct: 491 SSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLE 550
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ ++ G P +TY ++I+ + G ++ A KV +M ++G VV Y +++
Sbjct: 551 RVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAII 610
Query: 243 AMYGKTGRIRDAMRLVAKM-KPKGCEPNVWIYNSLMD 278
Y + + M++ +M PN IYN L+D
Sbjct: 611 HAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILID 647
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 114/270 (42%), Gaps = 17/270 (6%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV-YASLICSFASIAEVKVAEELFKE 120
++ L D L K G+ + L +MK I +V Y LI F A ELF++
Sbjct: 359 LFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQ 418
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
E+G+ ++ LV + G V + +E MK L + +++ F
Sbjct: 419 MNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN 478
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A++ +E+++S GC P V Y S+I+ C G + A V +++ GF Y+
Sbjct: 479 INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNV 538
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--------- 291
+++ + K ++ L+ +M+ G +P+ YN+L+ G+ + K
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG 598
Query: 292 -------YTTVISAYNMAREFDMCVKFYNE 314
Y +I AY + D +K + E
Sbjct: 599 LRPSVVTYGAIIHAYCSKKNVDEGMKIFGE 628
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 137/346 (39%), Gaps = 47/346 (13%)
Query: 38 SEKVAALFLEC--ESR----------KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRD 85
+ K A+L L+C +R +LD + S + L L KSGRA + L +
Sbjct: 140 TPKSASLLLQCLENARLVNDSLLLFNQLDPSSKSPQLCHGLLRVLLKSGRAGDALHVLDE 199
Query: 86 MKEKGI---LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI- 141
M + + V+ L+ S S + +V L + E+G+ D +LV
Sbjct: 200 MPQANSGFSVTGEIVFGELVRSGRSFPDGEVVG-LVAKLGERGVFPDGFKLTQLVGKLCG 258
Query: 142 --EEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
+ G+ + L V + A D SC ++ + R ++ ++ + P
Sbjct: 259 DQKNGVAWEVLHCVMRLGGA----VDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRP 314
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQK------GFDKCVVAYSSMVAMYGKTGRIR 252
VT+ ++N C+ +A +VF ++ K G + VV +++++ K G+
Sbjct: 315 SVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEE 374
Query: 253 DAMRLVAKMKPKGCE-PNVWIYNSLMDMHGRAKN-------LRQLEK---------YTTV 295
D + L+ +MK PN YN L+D +A N RQ+ + T+
Sbjct: 375 DGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTL 434
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ V+F+NE + G + A ++ F ++ I
Sbjct: 435 VDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNIN 480
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 139/310 (44%), Gaps = 19/310 (6%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S + +MK G+ + Y ++ F+K+ D +LF E + Y
Sbjct: 248 SAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLF---EEMRHQYCRPDVFTYT 304
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L LGK+GR E FF +M+ +G D V ++I + A +LF+E
Sbjct: 305 ELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEM--- 361
Query: 125 GMLRDLEVFLK----LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G LR + + + ++ + + E MK + ++ S ++++GF K
Sbjct: 362 GTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNR 421
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A+ + E++ +G P Y S+I+A + Y A ++F E+++ Y+
Sbjct: 422 MEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAV 481
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-------KNLRQLEKYT 293
M+ GK GR+ DA+ + +M GC P+V+ YN+LM R +R+++++
Sbjct: 482 MIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHG 541
Query: 294 TV--ISAYNM 301
+ I++YN+
Sbjct: 542 CIPDINSYNI 551
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 128/308 (41%), Gaps = 22/308 (7%)
Query: 36 GDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDP 95
G EKV L+ E + + T Y L + K GR ++ +MK+ G+
Sbjct: 208 GQYEKVHELYNEMSTEGHCFPDTMT--YSALISAFCKLGRRDSAIQLLNEMKDNGMQPTT 265
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
+Y L+ F + +V A LF+E + D+ + +L+ + G +++
Sbjct: 266 KIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYE 325
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA-YCRIG 214
M+ + ++N K A+K+++++ + CIP VTY +II A +
Sbjct: 326 MQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKS 385
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
S+ F M++ G YS ++ + KT R+ AM L+ +M KG P Y
Sbjct: 386 RASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYC 445
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
SL+D G+AK +D+ + + E + N G + +M+
Sbjct: 446 SLIDALGKAK-------------------RYDLACELFQELKENCGSSSSRVYAVMIKHL 486
Query: 335 SKLSQIEE 342
K ++++
Sbjct: 487 GKAGRLDD 494
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM-LR 128
LG + + + F +K + Y S+I + + EL+ E +G
Sbjct: 169 LGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFP 228
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ + + G + ++++ MK+ + + I ++V F K A+ ++
Sbjct: 229 DTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLF 288
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ Q C P TY +I + G +A F EMQ++G + ++M+ GK
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKA 348
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ DAM+L +M C P+V YN+++
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTII 377
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 134/276 (48%), Gaps = 7/276 (2%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLGKSGR 75
G + Y I++ F K G+ + A++ E CE ++P+ Y L + KS R
Sbjct: 564 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE---FGVSPNVV-TYTSLINGFCKSNR 619
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
LK +M+EKG+ D + Y++LI F +++ A++LF E E G+ + V+
Sbjct: 620 IDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNS 679
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
++ + + +E L + M N + +++G K A +Y +++S+G
Sbjct: 680 MISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKG 739
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
+P +T+ ++N C G A K+ EM +K V+ Y++++A Y + G +++A
Sbjct: 740 IVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAF 799
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
L +M +G P+ Y+ L++ G+ K R L +
Sbjct: 800 TLHDEMLDRGLVPDDVTYDILIN--GKFKGDRSLSR 833
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 4/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +MK GI ++ + K E+ + LF E +D ++ Y I+
Sbjct: 383 YTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA----VDCGVANIFTYNIMMSW 438
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ E +M +G++ + Y +I + +A +F + + + +
Sbjct: 439 LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPN 498
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ ++G EK L++ + M + + +D I+NG K A +
Sbjct: 499 VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLK 558
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ +G IP +TY SI++ + + G A V+ EM + G VV Y+S++ + K+
Sbjct: 559 NFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 618
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
RI A++ +M+ KG E +V Y++L+D
Sbjct: 619 RIDLALKTRDEMREKGLELDVTAYSALID 647
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ +K GDSEK LF + S L++ P+ + + + L K G+ E +
Sbjct: 502 YSILIDGNFKKGDSEKALDLFDQMLS--LNIAPTD-FTFNTIINGLCKVGQMSEARDKLK 558
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+ E+G + Y S++ F + A +++E E G+ ++ + L+ + +
Sbjct: 559 NFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 618
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ L+ + M+ L + +++GF KRR +A ++ +L+ G P ++ Y
Sbjct: 619 RIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYN 678
Query: 205 SIINAY----------------------CRIGLYSK-------------AEKVFIEMQQK 229
S+I+ + C +G Y+ A +++EM K
Sbjct: 679 SMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSK 738
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G ++ + +V G++ +A +++ +M K P+V IYN+L+ + R NL++
Sbjct: 739 GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKE 797
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 113/249 (45%), Gaps = 34/249 (13%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K GR E ++FR+ KE+G+ D Y+ +I + + EL +E +E+G +
Sbjct: 232 KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 291
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F +++ + +G + + L + E M N ++ ++ ++ G+ + +A+ ++ ++
Sbjct: 292 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 351
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--------------------- 230
G P +VTY+ +I C G KA +++ +M+ G
Sbjct: 352 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 411
Query: 231 ------FDK---CVVA----YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
FD+ C VA Y+ M++ K G++ +A L+ M +G PNV YN ++
Sbjct: 412 EEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMI 471
Query: 278 DMHGRAKNL 286
H R N+
Sbjct: 472 LGHCRKGNM 480
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 1/224 (0%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D+ P +M IL +L + E+ + M +GI D ++ + V+
Sbjct: 180 DVIPWVPYM-NILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEE 238
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
AEE F+E +E+G+ D + ++ ++ LE++E MK S+ ++
Sbjct: 239 AEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIV 298
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+ A+++ E++I+ G V S++ YC G A +F ++ + G
Sbjct: 299 ACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFP 358
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V YS ++ +G I A L +MK G P+V+ NSL+
Sbjct: 359 NKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL 402
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
N ++ L +Y+KM + I D G Y +++ K G + L++E S+ + P
Sbjct: 688 NNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKG--IVPDII 745
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ +L + L G+ K +M K + +Y +LI + +K A L E
Sbjct: 746 -TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDE 804
Query: 121 AEEKGMLRD 129
++G++ D
Sbjct: 805 MLDRGLVPD 813
>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
Length = 363
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 11/224 (4%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y L D L K+GR E+ + F +MK K D Y+ LI F + + +A LF +
Sbjct: 46 NTYNTLIDGLCKTGRVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDD 105
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGF 175
++ L D+ F LV Y G+V+ ++E E+ SDC V +V+GF
Sbjct: 106 MLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLE-----EIVASDCSPDVYTYTSLVDGF 160
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K + A +V +++ C P V Y ++I+A+C G + A K+ EM G
Sbjct: 161 CKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNA 220
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKM-KPKGCEPNVWIYNSLMD 278
+ Y S++ + TG + +A +++ ++ + + C+ +++ Y +MD
Sbjct: 221 ITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMD 264
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%)
Query: 90 GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKT 149
GI + Y SLI F V L +E G L D+ + L+ + G V +
Sbjct: 5 GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEV 64
Query: 150 LEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
+ MK N ++ GF K A +++ ++ Q +P VT+ +++
Sbjct: 65 NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEG 124
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
YC GL AE++ E+ V Y+S+V + K R+ +A R++ +M C+PN
Sbjct: 125 YCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPN 184
Query: 270 VWIYNSLMD 278
V IY +L+D
Sbjct: 185 VVIYTALID 193
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 105/239 (43%), Gaps = 26/239 (10%)
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSKRR 179
G+ ++ + L+ + V+ TL ++E E+ + C+ + +++G K
Sbjct: 5 GIEPNMVTYNSLIHGFCMTNGVDSTLLLME-----EMTATGCLPDINTYNTLIDGLCKTG 59
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+++ ++ ++ C P +TY+ +I +C++ + A +F +M ++ VV +
Sbjct: 60 RVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFP 119
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-------- 291
++V Y G + DA RL+ ++ C P+V+ Y SL+D + K + + +
Sbjct: 120 TLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKG 179
Query: 292 --------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I A+ A + + K E NG + ++G F +EE
Sbjct: 180 ECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEE 238
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 136/270 (50%), Gaps = 9/270 (3%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL---CD 68
KMK GI + Y I+ F K G +E AA + E++++ T +++ KI+ C
Sbjct: 369 KMKEEGIEMSLVTYSVIVGGFSKAGHAE--AADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ RA ++ R+M+E+GI ++Y +++ + +A+ K +FK +E G
Sbjct: 427 TCNME-RAEALV---REMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ +Y + G + K LEV MK + + +++NGF K + + A V+
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E ++ +G P + Y +II+A+C +G +A + EMQ+ + ++ Y K+
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G +R ++ + M+ GC P V +N L++
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLIN 632
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 153/356 (42%), Gaps = 51/356 (14%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ GI Y +M+ + + D +K +F ++ TP+ Y L +
Sbjct: 439 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL--KECGFTPTVV-TYGCLINLYT 495
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ + L+ R MKE+G+ + Y+ +I F + + A +F++ ++GM D+
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
++ ++ + G +++ ++ V+ M+ + I++G++K +++V++ +
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 192 ISQGCIP--------------------------------GQVTYASIINAYCRIGLYSKA 219
GC+P + TY I+ Y +G KA
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 675
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ F +Q +G D + Y +++ K+GR++ A+ + +M + N ++YN L+D
Sbjct: 676 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 735
Query: 280 HGR-------AKNLRQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
R A ++Q++K YT+ ISA + A + + + E G
Sbjct: 736 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 791
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 117/254 (46%), Gaps = 6/254 (2%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
+ I+ + K GD + +F R+ P+ H + L + L + +A EIL
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMM--RRCGCVPT-VHTFNGLINGLVEKRQAVEILD-- 645
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+M G+ + Y ++ +AS+ + A E F + +G+ D+ + L+ +
Sbjct: 646 -EMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKS 704
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G ++ L V + M + + + ++++G+++R W A + +Q+ +G P TY
Sbjct: 705 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 764
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
S I+A + G ++A + EM+ G + Y++++ + + A+ +MK
Sbjct: 765 TSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA 824
Query: 264 KGCEPNVWIYNSLM 277
G +P+ +Y+ L+
Sbjct: 825 MGIKPDKAVYHCLL 838
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 28 IMEAFY-KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDM 86
+M FY + GD + F +R +TP+S +Y L + E L R M
Sbjct: 314 LMVKFYGRRGDMHRARETFERMRAR--GITPTS-RIYTSLIHAYAVGRDMDEALSCVRKM 370
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
KE+GI Y+ ++ F+ + A+ F EA+ + ++ K++ + + +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
E+ +V M+ ++ I +++G++ + V+++L G P VTY +
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
IN Y ++G SKA +V M+++G + YS M+ + K +A + M +G
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 267 EPNVWIYNSLM 277
+P+V +YN+++
Sbjct: 551 KPDVILYNNII 561
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 118/274 (43%), Gaps = 6/274 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M G+ D Y I+ AF +G+ ++ A+ E +KL P+ T + +
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDR--AIQTVKEMQKLRHRPT-TRTFMPIIHG 598
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KSG L+ F M+ G + + LI + E + A E+ E G+ +
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI---NGLVEKRQAVEILDEMTLAGVSAN 655
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ K++ Y G K E ++N L++ ++ K +A+ V +
Sbjct: 656 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 715
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ ++ Y +I+ + R G +A + +M+++G + Y+S ++ K G
Sbjct: 716 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 775
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ A + + +M+ G +PN+ Y +L+ RA
Sbjct: 776 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWARA 809
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++MK G+ D Y + A K GD + E E+ L + P+ Y L
Sbjct: 750 QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEA--LGVKPN-IKTYTTLIKGW 806
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSF---ASIAEVKVAEELF---KEAEEK 124
++ + L + +MK GI D +VY L+ S ASIAE + + KE E
Sbjct: 807 ARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEA 866
Query: 125 GMLRDL 130
G++ D+
Sbjct: 867 GLIVDM 872
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 146/294 (49%), Gaps = 12/294 (4%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL---CD 68
KMK GI + Y I+ F K G++E F E++++ T +++ KI+ C
Sbjct: 370 KMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWF--DEAKRIHKTLNASIYGKIIYAHCQ 427
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ RA ++ R+M+E+GI ++Y +++ + +A+ K +FK +E G
Sbjct: 428 TCNME-RAEALV---REMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTP 483
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ +Y + G + K LEV MK + + +++NGF K + + A V+
Sbjct: 484 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 543
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E ++ +G P + Y +II A+C +G +A + EMQ+ + ++ + K+
Sbjct: 544 EDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKS 603
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
G +R ++ + M+ GC P V +N+L++ G + RQ+EK ++ +A
Sbjct: 604 GDMRRSLEVFDMMRRCGCVPTVHTFNALIN--GLVEK-RQMEKAVEILDEMTLA 654
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 116/254 (45%), Gaps = 3/254 (1%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
+ I+ F K GD + +F R+ P+ H + L + L + + + ++
Sbjct: 592 TFMPIINGFAKSGDMRRSLEVFDMM--RRCGCVPT-VHTFNALINGLVEKRQMEKAVEIL 648
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+M G+ + Y ++ +AS+ + A E F + +G+ D+ + L+ +
Sbjct: 649 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKS 708
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G ++ L V + M + + + ++++G+++R W A + +Q+ +G P TY
Sbjct: 709 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 768
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
S I+A + G ++A + EM+ G + Y++++ + + A+ +MK
Sbjct: 769 TSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA 828
Query: 264 KGCEPNVWIYNSLM 277
G +P+ +Y+ L+
Sbjct: 829 VGLKPDKAVYHCLL 842
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 146/332 (43%), Gaps = 23/332 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTHMYKILCDSL 70
MK G+ + Y ++ F K+ D A+F + E K D+ ++ C +
Sbjct: 511 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI-LYNNIIAAFC-GM 568
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G RA + +K + ++ + + +I FA +++ + E+F G + +
Sbjct: 569 GNMDRAIQTVKEMQKLRHRPTTR---TFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTV 625
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +E+ +EK +E+++ M A ++ ++ I+ G++ A + + +
Sbjct: 626 HTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTR 685
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L ++G TY +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 686 LQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 745
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLE---------KYTT 294
+ +A L+ +MK +G +P++ Y S + DM+ + + ++E YTT
Sbjct: 746 VWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 805
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
+I + A + + Y E + G D+A+
Sbjct: 806 LIKGWARASLPEKALSCYEEMKAVGLKPDKAV 837
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 17/231 (7%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M AG+ + Y +IM+ + +GD+ K F ++ L++ Y+ L +
Sbjct: 649 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEV---DIFTYEALLKAC 705
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
KSGR L ++M + I + VY LI +A +V A +L ++ +++G+ D+
Sbjct: 706 CKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDI 765
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ + + G + + + +E M+ + + ++ G+++ A+ YE+
Sbjct: 766 HTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEE 825
Query: 191 LISQGCIPGQVTY----------ASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ + G P + Y ASI AY +YS + EM + G
Sbjct: 826 MKAVGLKPDKAVYHCLLTSLLSRASIAEAY----IYSGVMTICKEMVEAGL 872
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 106/256 (41%), Gaps = 36/256 (14%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICS------------ 104
PS T + ++ G+ G + F M+ +GI +Y SLI +
Sbjct: 308 PSRTE-FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALS 366
Query: 105 -----------------------FASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
F+ + A+ F EA+ + ++ K++ +
Sbjct: 367 CVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHC 426
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ +E+ +V M+ ++ I +++G++ + V+++L G P V
Sbjct: 427 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVV 486
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY +IN Y ++G SKA +V M+++G + YS M+ + K +A + M
Sbjct: 487 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 546
Query: 262 KPKGCEPNVWIYNSLM 277
+G +P+V +YN+++
Sbjct: 547 VKEGMKPDVILYNNII 562
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A E F+ +G+ ++ L+ Y +E+ L V MK + +S VIV
Sbjct: 329 ARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVG 388
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
GFSK AA +++ Y II A+C+ +AE + EM+++G D
Sbjct: 389 GFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDA 448
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+ Y +M+ Y + + + ++K G P V Y L++++ +
Sbjct: 449 PIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTK 497
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
W AV + I++ P + + ++ Y R G +A + F M+ +G Y+S+
Sbjct: 295 WQAVISAFEKINK---PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSL 351
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+ Y + +A+ V KMK +G E ++ Y+ ++ +A N + +
Sbjct: 352 IHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHW 402
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 112/235 (47%), Gaps = 9/235 (3%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L DSL K+G E + DM +G + + Y+ LI + + A EL +E
Sbjct: 75 YNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMT 134
Query: 123 EKG--MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS-DCIS-CVIVNGFSKR 178
K +L ++ + + ++ M + E++ S+++ L +S D ++ +++G K
Sbjct: 135 RKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC 194
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A V++ +I+ G +P +TY +++N C+ +A + M KG V+ Y
Sbjct: 195 GQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 254
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI-----YNSLMDMHGRAKNLRQ 288
S +V + K R+ +A+ L+ M +GC PNV + +N L+ +A N Q
Sbjct: 255 SVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQ 309
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 5/251 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKG-----ILEDPSVYASLICSFASIAEVKVAEEL 117
Y +L D+ K+ R E L+ M +G ++ D + LI + A L
Sbjct: 254 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASAL 313
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F+E K + D+ F L+ + G VE ++++ M N + + +V+G K
Sbjct: 314 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 373
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A + E+++S GC+P +TY S++ A CR A ++ E++ G+D V
Sbjct: 374 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 433
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
Y+ +V K+G+ A+ ++ +M KG +P+ + + + R+ NL + V+
Sbjct: 434 YNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVL 493
Query: 298 AYNMAREFDMC 308
A M + C
Sbjct: 494 AKGMLPDATTC 504
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
I+NG K A ++++E+L+ +G P VTY ++I++ C+ G +A ++ +M +
Sbjct: 42 TIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 101
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE--PNVWIYNSLMD 278
G VV YS ++ K GRI +A L+ +M K C+ PN+ YNS +D
Sbjct: 102 GCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 152
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 100/221 (45%), Gaps = 5/221 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFR-DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y I+ SL ++G L+ FR +M G+ Y ++I ++ ELF+E
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E+G D+ + L+ + G +E+ + M + + V++NG K
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 182 WAAVKVYEQLISQGC--IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVA 237
A ++ +++ + C +P +TY S ++ C+ + ++A ++ ++ V
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+S+++ K G+I +A + M G PNV YN+L++
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVN 224
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ G P VTY +IIN C+ ++F E+ ++G VV Y++++ K G
Sbjct: 27 EMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAG 86
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
+ +A RL M +GC PNV Y+ L++ GR R+L
Sbjct: 87 DLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEAREL 129
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 91/225 (40%), Gaps = 3/225 (1%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
K G+ E+ +ALF E ++ L + L D L K+G+ M G+
Sbjct: 303 KAGNFEQASALFEEMVAKNLQ---PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 359
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ Y +L+ ++ A + +E G + D + LV + L++V
Sbjct: 360 NVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV 419
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+K+ + ++V+G K A+ V E+++ +G P T+A+ + R
Sbjct: 420 SELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRS 479
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
G + ++ + KG SS++ ++G++ D ++
Sbjct: 480 GNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMI 524
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 203 YASIINAYCRIGLYSKAEKVFI-EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
Y ++ + CR G ++A ++F EM + G +V Y++++ K+ + M L ++
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+G P+V YN+L+D +A +L + +
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARR 93
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ E+M S+G V DS Y ++ A + ++ L E +S D T Y IL
Sbjct: 382 QFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD---PDTVTYNILV 438
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D L KSG+ + + +M KG D +A+ + EL + KGML
Sbjct: 439 DGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGML 498
Query: 128 RD 129
D
Sbjct: 499 PD 500
>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 134/288 (46%), Gaps = 17/288 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++ + +GI LD Y +++A K+G E+ L E + R++ L H Y L
Sbjct: 371 FKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSL--DVVH-YTTLIAG 427
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ + F +MKE+GI D Y L+ F+ K A EL +G+ +
Sbjct: 428 YCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPN 487
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL-NISDCISCVIVNGFSKRRAYWAAVKVY 188
+++ G V++ + ++++ L N S +V+G+ K A +++
Sbjct: 488 SATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYS-----AMVDGYCKANFTRKAYELF 542
Query: 189 EQLISQGCI--------PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+L QG + P Q+ Y +I A+CR G +A+ VF + ++G V+ Y+
Sbjct: 543 SRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTM 602
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
M+ Y + +R+A + MK +G +P+V Y ++D H + NL+
Sbjct: 603 MINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQD 650
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 120/286 (41%), Gaps = 34/286 (11%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M + GI D Y ++ A+ K G+ + AL + +
Sbjct: 323 MVNEGIAPDGYIYGALIHAYCKAGNLLQAVALH----------------------NDMVS 360
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G ++ F++ ++ GI D +Y ++ + + +V+ A EL E + + M D+
Sbjct: 361 NGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVH 420
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ Y +G + + E MK + ++V GFS+ A+++ + +
Sbjct: 421 YTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIG 480
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+QG P T+ II C G +AE ++ DKC+ YS+MV Y K R
Sbjct: 481 TQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE----DKCLENYSAMVDGYCKANFTR 536
Query: 253 DAMRLVAKMKPKG--------CEPNVWIYNSLMDMHGRAKNLRQLE 290
A L +++ +G EPN +Y L+ R ++++ +
Sbjct: 537 KAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQ 582
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 141/319 (44%), Gaps = 33/319 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY-KILCD 68
Y +K G+ + Y ++A + G+ E+ +F E E ++ + Y + LC
Sbjct: 215 YRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLC- 273
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
S +S +E L R ++ D Y ++I F S ++K AE++F + +G+
Sbjct: 274 SHKRSDLGYEAL---RALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAP 330
Query: 129 DLEVFLKLVLMY----------------IEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
D ++ L+ Y + G+ ++ + +++ + + + + ++V
Sbjct: 331 DGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVV 390
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+ K AV++ ++ + V Y ++I YC G A+ +F EM+++G +
Sbjct: 391 DALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIE 450
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQ- 288
+V Y+ +V + + G ++A+ L+ + +G +PN +N +++ M G+ K
Sbjct: 451 PDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAF 510
Query: 289 --------LEKYTTVISAY 299
LE Y+ ++ Y
Sbjct: 511 LNTLEDKCLENYSAMVDGY 529
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 101/230 (43%), Gaps = 21/230 (9%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
+ G+ +S + +I+E G ++ A E + L+ Y + D K+
Sbjct: 481 TQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE-------NYSAMVDGYCKAN 533
Query: 75 RAFEILKFFRDMKEKGILE------DPS--VYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ + F + ++GIL +P+ +Y LI +F ++K A+ +F E+G+
Sbjct: 534 FTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGI 593
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + ++ Y + + ++ MK + V+++G SK A+
Sbjct: 594 TPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAIN 653
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIG------LYSKAEKVFIEMQQKG 230
+Y+++I++G P VTY +++ C G + + K+FI Q +G
Sbjct: 654 LYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWLEEPKLFILAQPRG 703
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 40/243 (16%)
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQ 194
LV Y+ GM ++ ++ + K + +SC ++N + AV +Y L
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGF-VPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRL 221
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV------------------ 236
G P TY I A CR G + +A VF EM++ G + V
Sbjct: 222 GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLG 281
Query: 237 -----------------AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
AY++++ + ++++A + M +G P+ +IY +L+
Sbjct: 282 YEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341
Query: 280 HGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
+ +A NL Q + + + V + EFR +G +D + I+V KL +
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTNL---VDQFKEFRDSGIFLDEVLYNIVVDALCKLGK 398
Query: 340 IEE 342
+EE
Sbjct: 399 VEE 401
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 131/328 (39%), Gaps = 44/328 (13%)
Query: 28 IMEAFYKIGD-SEKVAALFLECESRKLDLTPSSTHMY--KILCDSLGKSGRAFEILKFFR 84
+++A+ ++G E + ALF ++++ P H+ L + L + G+ + +R
Sbjct: 163 LVKAYVRVGMFDEAIDALF---QTKRRGFVP---HIMSCNFLMNRLIEHGKIDMAVAIYR 216
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+K G+ + Y I + + A ++F+E EE G+ + +
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHK 276
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ E + +++ A I ++ GF A V+ ++++G P Y
Sbjct: 277 RSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYG 336
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV----------------AYSSMVAMYGKT 248
++I+AYC+ G +A + +M G +V Y+ +V K
Sbjct: 337 ALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKL 396
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
G++ +A+ L+ +MK GR +L + YTT+I+ Y + +
Sbjct: 397 GKVEEAVELLNEMK------------------GRRMSL-DVVHYTTLIAGYCLQGKLVDA 437
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+ E + G D I+VG FS+
Sbjct: 438 KNMFEEMKERGIEPDIVTYNILVGGFSR 465
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 3/266 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G++ D Y I+ + G ++ + S D + Y L + L K
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS---DGVEPNVVTYSSLMNYLCK 318
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+GR+ E K F M ++G+ D + Y +L+ +A+ + L G+ D V
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F L+ Y ++ V++ + V M+ LN + +++ K + A+ +EQ+I
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P + Y S+I+ C + KAE++ +EM +G + ++S++ + K GR+
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 498
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +L M G +P++ YN+L+D
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLID 524
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 5/275 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH + G D Y ++ F+K GDS+K + + E R + P Y +
Sbjct: 186 LHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGI--LPDVV-TYSSI 242
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+L K+ + ++ M + G++ D Y S++ + S + K A K+ G+
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 302
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L+ + G + ++ +SM L ++ G++ + A
Sbjct: 303 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHA 362
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + ++ G P + +I AY + +A VF +M+Q G + VV Y +++ +
Sbjct: 363 LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
K+G + DAM +M +G PN+ +Y SL +HG
Sbjct: 423 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSL--IHG 455
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 40/259 (15%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S ++ K LCD +S A E+L D + G D Y +++ F + A
Sbjct: 165 SYNNLLKGLCDE-NRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYST 223
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCIS-CVIVNGF 175
+ E ++G+L D+ + ++ + ++K +EV+ +M KN + DC++ I++G+
Sbjct: 224 YHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM--PDCMTYNSILHGY 281
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
A+ +++ S G P VTY+S++N C+ G ++A K+F M ++G + +
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341
Query: 236 VAYSSMVAMYGKTG-----------------------------------RIRDAMRLVAK 260
Y +++ Y G ++ AM + +K
Sbjct: 342 ATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401
Query: 261 MKPKGCEPNVWIYNSLMDM 279
M+ G PNV Y +++D+
Sbjct: 402 MRQHGLNPNVVCYGTVIDV 420
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 148/383 (38%), Gaps = 54/383 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+KM+S G+ + Y +M K G S + +F R L+ Y+ L
Sbjct: 295 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE---PDIATYRTLLQGY 351
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G E+ M GI D V+ LIC++A +V A +F + + G+ ++
Sbjct: 352 ATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNV 411
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESM-------------------------KNAE----- 160
+ ++ + + G V+ + E M AE
Sbjct: 412 VCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILE 471
Query: 161 -LNISDCISCV----IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
L+ C++ + I++ K + K+++ ++ G P +TY ++I+ C G
Sbjct: 472 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 531
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+A K+ M G +V Y +++ Y + R+ DA+ L +M G PN+ YN
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591
Query: 276 LMD--MHGR------------AKNLRQLEKYTTVISAYNMARE--FDMCVKFYNEFRMNG 319
++ H R K+ QLE T I + + + D ++ + +
Sbjct: 592 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 651
Query: 320 GVIDRAMAGIMVGVFSKLSQIEE 342
++ IM+G K +++E
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDE 674
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 4/269 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y+E+M G+ + Y ++ +K L LE R + L +T + + D
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL---NTIFFNSIID 489
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
S K GR E K F M G+ D Y +LI ++ A +L G+
Sbjct: 490 SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 549
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ Y ++ L + + M ++ ++ + +I+ G R AA ++Y
Sbjct: 550 DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 609
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ G TY I++ C+ L +A ++F + ++ M+ K
Sbjct: 610 VSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKC 669
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ +A L A G P+V Y SLM
Sbjct: 670 GRMDEAKDLFAAHSANGLVPDVRTY-SLM 697
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 111/271 (40%), Gaps = 13/271 (4%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+M GI L++ + I+++ K G +SEK+ L + + +T Y L D
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT------YNTLID 524
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+G+ E K M G+ D Y +LI + ++ + A LFKE G+
Sbjct: 525 GCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSP 584
Query: 129 DLEVFLKLV--LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + ++ L + K L V + +L +S +I++G K A++
Sbjct: 585 NIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS--TYNIILHGLCKNNLTDEALR 642
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ L T+ +I A + G +A+ +F G V YS M
Sbjct: 643 MFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLI 702
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G + + L M+ GC + + NS++
Sbjct: 703 EQGSLEELDDLFLSMEENGCSADSRMLNSIV 733
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 178 RRAYWAAVKVYEQLISQGC---IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
R + AAV Y ++ G P TYA +I CR G + +KGF
Sbjct: 67 RHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVD 126
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLV-AKMKPKGCEPNVWIYNSLM 277
+ ++ ++ R DAM +V +M GC P+V+ YN+L+
Sbjct: 127 AITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLL 170
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M+++G++ + Y +M+ + KI +K L+ E L P+ + IL D
Sbjct: 251 FRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGD--GLLPNVV-TFGILIDG 307
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ KF DM G++ + VY LI + + A L E E+ +L D
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ +E+ +++ MK + +++G+ K A++V
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+ +G P +T++++I+ YC+ G A ++ EM KG VVAY++++ + K G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++A RL +M+ G PNV+ + L+D
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLID 516
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 136/281 (48%), Gaps = 17/281 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y M + G + Y +++ + GD K LF E +K+ T +Y IL
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT---VVIYTILIRG 237
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L R E FR M+ G+L + Y +++ + IA VK A EL++E G+L +
Sbjct: 238 LCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPN 297
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMK----NAELNISDCI---SCVIVNGFSKRRAYW 182
+ F L+ +G+ KT E+V + K A + I +C+I +G+ K
Sbjct: 298 VVTFGILI-----DGLC-KTDEMVSARKFLIDMASFGVVPNIFVYNCLI-DGYCKAGNLS 350
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ ++ ++ +P TY+ +I C + +A+ + EM++KGF V Y++++
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y K G + A+ + ++M KG EPN+ +++L+D + +A
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 3/251 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y++M G++ + + +++ K E V+A + + P+ +Y L
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKT--DEMVSARKFLIDMASFGVVPN-IFVYNCL 339
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D K+G E L ++++ IL D Y+ LI + ++ A+ L +E ++KG
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L + + L+ Y +EG +EK +EV M + + +++G+ K AA+
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+Y +++ +G +P V Y ++I+ + + G +A ++ EMQ+ G V S ++
Sbjct: 460 LYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519
Query: 247 KTGRIRDAMRL 257
K GRI DA++L
Sbjct: 520 KDGRISDAIKL 530
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 131 EVFLKLVLMYIEEGMVEKTL------EVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
VF L++ + E G+VE+ L +V+ +M+ + +++G K+ +
Sbjct: 127 NVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNM---------VLDGLVKKGRFDTM 177
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
KVY ++++G P VTY ++I+ CR G + KA ++F EM +K VV Y+ ++
Sbjct: 178 WKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRG 237
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKY 292
RI +A + M+ G PN++ YN++MD + + ++++ LE Y
Sbjct: 238 LCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
K+D+ P+ +L D L K GR + K + DM +G + Y +LI +
Sbjct: 151 KMDVLPAMQACNMVL-DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A LF E EK + + ++ L+ E + + + +M+N+
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNS------------ 257
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
G +P TY ++++ YC+I KA +++ EM G
Sbjct: 258 -----------------------GMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGL 294
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
VV + ++ KT + A + + M G PN+++YN L+D + +A NL +
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 83/187 (44%), Gaps = 3/187 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L + +++ I+ D Y +++ + E+ L E +K P++
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE--MKKKGFLPNAV- 404
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D K G + ++ M EKGI + +++LI + +++ A L+ E
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
KG+L D+ + L+ + ++G ++ + + M+ A L+ + +++G K
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524
Query: 182 WAAVKVY 188
A+K++
Sbjct: 525 SDAIKLF 531
>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 134/308 (43%), Gaps = 25/308 (8%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKL---DLTPSSTHMYKILCDSLGKSGRAFEILK 81
Y ++ F K D +K LF E R + + T S+ LC+ K+ ++
Sbjct: 179 YNVTLKVFRKGRDLDKAEKLFDEMLERGVKPDNFTFSTIISCARLCNLADKA------VE 232
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
+F M G+ D +++I S+ V+ A L+ A D F L+ +Y
Sbjct: 233 WFEKMPSFGLEPDDVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRIYK 292
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
G + L V E MK + + I ++++ + + W K Y+ +I G P V
Sbjct: 293 VAGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGLSPSFV 352
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TYA++++AY R A K++ EM++KG VV Y+S++AM G + A+ + M
Sbjct: 353 TYAALLHAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDM 412
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREF 305
K G +P+ W ++S++ + + + E T++I Y A+
Sbjct: 413 KSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNEMFEAGFQPNIFILTSLIQCYGKAQRI 472
Query: 306 DMCVKFYN 313
D V +N
Sbjct: 473 DDVVNTFN 480
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 121/294 (41%), Gaps = 53/294 (18%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
++ +++ A LKFF++ + + VY + F ++ AE+LF E E+
Sbjct: 148 VILNNMSNPDTALLALKFFQERLK--FNREVVVYNVTLKVFRKGRDLDKAEKLFDEMLER 205
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ D F S ISC + + + W
Sbjct: 206 GVKPDNFTF------------------------------STIISCARLCNLADKAVEW-- 233
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+E++ S G P VT +++I++Y R G KA ++ + + A+S+++ +
Sbjct: 234 ---FEKMPSFGLEPDDVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRI 290
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------- 291
Y G + + +MK G +PN+ IYN L+D GRAK Q++K
Sbjct: 291 YKVAGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGLSPS 350
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y ++ AY AR + K Y E + G ++ + ++ + + L +++
Sbjct: 351 FVTYAALLHAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDK 404
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ YE+MK+ G+ + Y +++A + +V + + L +PS Y L
Sbjct: 301 LNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGL--SPSFV-TYAAL 357
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ G++ + K +R+MKEKG+ + +Y S++ A + V A E+F++ + G+
Sbjct: 358 LHAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDMKSSGI 417
Query: 127 LRDLEVFLKLVLMY 140
D F ++ ++
Sbjct: 418 KPDSWTFSSMITIF 431
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 162/388 (41%), Gaps = 69/388 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ +M + G D+ Y ++ + K G D+ ++A F S +Y L
Sbjct: 202 FVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----------KPSVPVYNAL 250
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
D + K GR +K +M + G+ DP+V Y+ +I S V++A LF + +
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGV--DPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308
Query: 125 GMLRDLEVFLKLV-----------------LMYIE------------------EGMVEKT 149
G ++ F L+ LM + G +E+
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368
Query: 150 LEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
L+V + M+ + + ++++GF+K A + + ++IS GC P VTY +++
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
C+ ++ +A + +M +G + +++ + GR+ AM+L+ +M+ GC PN
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488
Query: 270 VWIYNSLMDMHGR---------------AKNLR-QLEKYTTVISAYNMAREFDMCVKFYN 313
+ YN L+D R A+NL+ L Y TV+ ++ A ++ +
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG 548
Query: 314 EFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ + G D M+ + K +++
Sbjct: 549 KALVRGTAPDSITYNTMIHAYCKQGKVK 576
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 127/311 (40%), Gaps = 43/311 (13%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++MK GI + I+ + ++G +E+ +F + P+ +Y L D+L
Sbjct: 98 QQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIG--EFGCKPT-VRIYNHLLDAL 154
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ I + +MK+ G++ + Y L+ + V A +LF E KG D
Sbjct: 155 LSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDA 214
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V + G ++ E+ K S + +++G K A+K+ +
Sbjct: 215 VTYTTMVSSLCKAGKIDDARELAGRFKP-----SVPVYNALIDGMCKEGRIEVAIKLLGE 269
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM------------------------ 226
++ G P V+Y+ IIN+ C G A +F +M
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK 329
Query: 227 -----------QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
Q G + VVAY++++ G + +A+++ +M+ GC PNV Y+
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389
Query: 276 LMDMHGRAKNL 286
L+D ++ +L
Sbjct: 390 LIDGFAKSGDL 400
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 100/220 (45%), Gaps = 5/220 (2%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ Y+++ + LG+ + + MK GI ++ +I + + + A ++F
Sbjct: 73 TASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF 132
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E G + ++ L+ + E + + +MK L + +++ K
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKN 192
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
AA K++ ++ ++GC P VTY +++++ C+ G A ++ F V Y
Sbjct: 193 DRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVY 247
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++++ K GRI A++L+ +M G +PNV Y+ +++
Sbjct: 248 NALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 6/201 (2%)
Query: 79 ILKFFRDMKEKGILEDP-SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
+L FF + + S Y +I E+ + + + ++ + G+ ++F+ ++
Sbjct: 57 VLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICII 116
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
Y G E+ L++ + + I +++ + +Y + G I
Sbjct: 117 NGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLI 176
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P TY ++ A C+ A K+F+EM KG V Y++MV+ K G+I DA L
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236
Query: 258 VAKMKPKGCEPNVWIYNSLMD 278
+ K P+V +YN+L+D
Sbjct: 237 AGRFK-----PSVPVYNALID 252
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILCD 68
E+M+ G + + Y ++++A +++ E+ LF E E+R L +L +T +Y
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY----- 532
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE-KGML 127
++G E L+ F +G D Y ++I ++ +VK+A +L + K
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWH 592
Query: 128 RDLEVFLKLV-----LMYIEEGM 145
D+ + L+ M IEE M
Sbjct: 593 PDIITYTSLIWGACNWMNIEEAM 615
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 127/253 (50%), Gaps = 21/253 (8%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
MK++ + ++ S+ + + A +F + E + + +L ++ + +EE
Sbjct: 76 MKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENH 135
Query: 146 VEKTLEVVESMKNAELNISDCISC--VIVNGFSKRR-AYWAAVKVYEQLISQGCIPGQVT 202
V++ + M+ EL I + +++ K + +A+++++++ ++GC P T
Sbjct: 136 VKRAIGFYREMR--ELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYT 193
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y ++IN CR+G S+A+++F EM+QKGF VV Y+S++ ++ + +A+ L+ +MK
Sbjct: 194 YGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMK 253
Query: 263 PKGCEPNVWIYNSLMD----------------MHGRAKNLRQLEKYTTVISAYNMAREFD 306
EPNV+ Y+SLMD + + +L + Y+T+I+ R+
Sbjct: 254 RNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLR 313
Query: 307 MCVKFYNEFRMNG 319
V+ + R+ G
Sbjct: 314 EAVEILDRMRIQG 326
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 109/233 (46%), Gaps = 2/233 (0%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFE-ILKFFRDMKEKGILEDPSVYASLICSFAS 107
E R+L + PSS IL +L K+ + L+ F++M +G D Y +LI
Sbjct: 145 EMRELGI-PSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCR 203
Query: 108 IAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI 167
+ + A+ELFKE E+KG + + L+ + +++ + ++E MK ++ +
Sbjct: 204 LGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFT 263
Query: 168 SCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
+++G K A+++ E + + +P VTY+++IN C+ +A ++ M+
Sbjct: 264 YSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMR 323
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+G Y +++ G ++A + +M G PN ++ + MH
Sbjct: 324 IQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMH 376
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 121/271 (44%), Gaps = 10/271 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+MK ++ + I + ++ +F + E +L T + Y + D L
Sbjct: 74 ERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKA---YLTILDIL 130
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE----VKVAEELFKEAEEKGM 126
+ + F+R+M+E GI PS SL ++ + V A +F+E +G
Sbjct: 131 VEENHVKRAIGFYREMRELGI---PSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGC 187
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ G + + E+ + M+ + S +++G + A+
Sbjct: 188 QPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIG 247
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ E++ P TY+S+++ C+ G S+A ++ M +K +V YS+++
Sbjct: 248 LLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLC 307
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K ++R+A+ ++ +M+ +G +PN +Y ++
Sbjct: 308 KERKLREAVEILDRMRIQGLKPNAGLYGKII 338
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/277 (18%), Positives = 119/277 (42%), Gaps = 10/277 (3%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S L +++M + G DS Y ++ ++G+ + LF E E + +S Y
Sbjct: 174 SALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFS---ASVVTYT 230
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L L +S E + +MK I + Y+SL+ A +L + ++K
Sbjct: 231 SLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKK 290
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
L ++ + L+ +E + + +E+++ M+ L + + I++G +Y A
Sbjct: 291 HHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEA 350
Query: 185 VKVYEQLISQGCIPGQVTYA-------SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
++++ G P + +++ ++ C +A ++++ M+ + +
Sbjct: 351 ANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDT 410
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ +V + K G + A R++ +M GC P+ ++N
Sbjct: 411 FDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWN 447
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
++P + +Y +L L K+GR F +M ++ IL D VYA+LI F + A
Sbjct: 446 VSPDAA-IYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
++F + EKG+ D+ ++ + GM+++ L + M L I++G
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+ K++ A+K++ + C P VTY S+IN +C G + AE+ F EMQ +
Sbjct: 565 YVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624
Query: 235 VVAYSSMVAMYGK-TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
VV Y++++ K + + A+ M C PN +N L+
Sbjct: 625 VVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 134/271 (49%), Gaps = 16/271 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL + L K G+ + F + +KG++ + YA LI ++ E +A +L +
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G D+ + L+ + G ++ + + + + ++ I ++++G K +
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ +++ + +P YA++I+ + R G + +A KVF +KG VV +++M+
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK---- 291
+ ++G + +A+ + +M + P+ + Y++++D + + +++ R +EK
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK 587
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRM 317
YT++I+ + +F M + + E ++
Sbjct: 588 PNVVTYTSLINGFCCQGDFKMAEETFKEMQL 618
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 113/278 (40%), Gaps = 20/278 (7%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F+++K KG + + ++I F + ++ L E +E+G+ + ++
Sbjct: 263 FKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYR 322
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G E + + + +++N K AV ++ +G IP ++
Sbjct: 323 HGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLS 382
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
YA +I AYC+ Y A K+ ++M ++G +V Y ++ +G + DA+ + K+
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------------YTTVISAYNMARE 304
+G P+ IYN LM G K R L Y T+I + + +
Sbjct: 443 DRGVSPDAAIYNMLMS--GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGD 500
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
FD K ++ G +D M+ F + ++E
Sbjct: 501 FDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDE 538
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%)
Query: 168 SCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
+C++V G K+ E +GCIP V Y +II YC++G A VF E++
Sbjct: 208 TCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELK 267
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
KGF + + +M+ + K G + RL++++K +G +VW N+++D R
Sbjct: 268 LKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYR 322
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 130/302 (43%), Gaps = 27/302 (8%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGD---SEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ +M I+ D+ Y +++ F + GD + KV +L +E + K+D+ + M K
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE-KGVKVDVVHHNA-MIKGF 530
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
C +SG E L M E+ ++ D Y+++I + ++ A ++F+ E+
Sbjct: 531 C----RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW-AAV 185
++ + L+ + +G + E + M+ +L + ++ +K + AV
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAV 646
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCR--------------IGLYSKAEKVFIEMQQKGF 231
+E +++ C+P +VT+ ++ + + G S + F M+ G+
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGW 706
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQ 288
AY+S + G ++ A KM KG P+ + +++ + G +K R
Sbjct: 707 SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRN 766
Query: 289 LE 290
++
Sbjct: 767 MD 768
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 118/222 (53%), Gaps = 1/222 (0%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+L +SL K + K F+ M + G++ + VY L+ + + + + AE+L E EEK
Sbjct: 173 VLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK 232
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ D+ + L+ +Y ++ M + L V + M+ + + + ++GFS+ A
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++ + I VTY ++I+ YCR+ +A ++ M+ +GF VV Y+S++
Sbjct: 293 TRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRK 351
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ GRIR+A RL+ +M K EP+ N+L++ + + +++
Sbjct: 352 LCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDM 393
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 15/196 (7%)
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
VF L++ Y + GM+ ++ V E +++ L V++N K+R K++++
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G + Y +++A + G KAEK+ EM++KG + Y++++++Y K
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------YTTV 295
+A+ + +M+ G PN+ YNS + R +R+ + YTT+
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTL 313
Query: 296 ISAYNMAREFDMCVKF 311
I Y + D ++
Sbjct: 314 IDGYCRMNDIDEALRL 329
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 126/301 (41%), Gaps = 35/301 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHM----- 62
++KM G+V + Y ++ A K GD EK L E E + + D+ +T +
Sbjct: 191 FKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCK 250
Query: 63 -------------------------YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
Y + GR E + FR++K+ + +
Sbjct: 251 KSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVT 309
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y +LI + + ++ A L + E +G + + ++ E+G + + ++ M
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Query: 158 NAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
++ D I+C ++N + K +AVKV +++I G +Y ++I+ +C++
Sbjct: 370 GKKIE-PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A++ M +KGF YS +V + + + +L+ + + +G +V +Y L
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGL 488
Query: 277 M 277
+
Sbjct: 489 I 489
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 9/228 (3%)
Query: 90 GILEDP----SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
G+ EDP V++ L+ +A + + +F++ G+ L+ L+ +++ +
Sbjct: 124 GVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRL 183
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+ ++ + M + + + V+V+ SK A K+ ++ +G P TY +
Sbjct: 184 TDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNT 243
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+I+ YC+ ++ +A V M++ G +V Y+S + + + GR+R+A RL ++K
Sbjct: 244 LISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDV 303
Query: 266 CEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYN 313
+V Y +L+D + R ++ + + V+ +R F V YN
Sbjct: 304 TANHV-TYTTLIDGYCRMNDIDEALRLREVME----SRGFSPGVVTYN 346
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 108/252 (42%), Gaps = 3/252 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ + ++ D ++ L ESR +P Y + L + GR E +
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESR--GFSPGVV-TYNSILRKLCEDGRIREANRLLT 366
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M K I D +LI ++ I ++ A ++ K+ E G+ D+ + L+ + +
Sbjct: 367 EMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVL 426
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+E E + SM + +V+GF + K+ E+ +G Y
Sbjct: 427 ELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYR 486
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+I C++ A+ +F M++KG V +++M Y +TG++ +A L M +
Sbjct: 487 GLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNR 546
Query: 265 GCEPNVWIYNSL 276
N+ +Y S+
Sbjct: 547 RLMVNLKLYKSI 558
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 9/180 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAA-LFLECESRKLDLTPSSTHMYKILCDS 69
+KM +G+ LD Y ++ F K+ + E LF E +P Y L D
Sbjct: 401 KKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEK---GFSPGYA-TYSWLVDG 456
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ EI K + +++G+ D ++Y LI + +V A+ LF+ E+KG++ D
Sbjct: 457 FYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGD 516
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS----DCISCVIVNGFSKRRAYWAAV 185
+F + Y G V + + + M N L ++ IS R +W+ V
Sbjct: 517 SVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLRFFWSHV 576
>gi|2244996|emb|CAB10416.1| salt-inducible protein homolog [Arabidopsis thaliana]
gi|7268388|emb|CAB78681.1| salt-inducible protein homolog [Arabidopsis thaliana]
Length = 777
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 147/334 (44%), Gaps = 20/334 (5%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y M+ F K D EK LF E R + ++T I C ++G +++F
Sbjct: 253 YNVTMKVFRKSKDLEKSEKLFDEMLERGIK-PDNATFTTIISCAR--QNGVPKRAVEWFE 309
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M G D A++I ++ V +A L+ A + D F L+ +Y G
Sbjct: 310 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 369
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ L + E MK + + I +++ + + W A +Y+ LI+ G P TYA
Sbjct: 370 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 429
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP- 263
+++ AY R A ++ EM++KG V+ Y+++++M + +A + MK
Sbjct: 430 ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRHVDEAFEIFQDMKNC 489
Query: 264 KGCEPNVWIYNSLMDMH---GRAKN----LRQLEK---------YTTVISAYNMAREFDM 307
+ C+P+ W ++SL+ ++ GR L Q+ + T+VI Y A++ D
Sbjct: 490 ETCDPDSWTFSSLITVYACSGRVSKAEAALLQIREAGFEPTLFVLTSVIQCYGKAKQVDD 549
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
V+ +++ G D G ++ V ++ E
Sbjct: 550 VVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEE 583
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 134/282 (47%), Gaps = 13/282 (4%)
Query: 4 QSKLHYYEKMKSA--GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
Q L + E+ S+ G ++ Y +++AF ++G+ L + E+ + P +
Sbjct: 226 QEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGV---PQNIV 282
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKE-----KGILEDPSVYASLICSFASIAEVKVAEE 116
+ L ++GR L+FFR+ + KG + Y++L+ + V +A E
Sbjct: 283 TLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKG---NAVTYSTLVGALLHTNNVGMAME 339
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF E +G D ++ ++ + G +E + SMK A + +++ GF
Sbjct: 340 LFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFC 399
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+++ A ++ +++ G P TY ++++ C+ G ++ +++ +M G V+
Sbjct: 400 RKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVI 459
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ ++V Y K G+I +A+R++ M G PN IYN+L+D
Sbjct: 460 TFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLID 501
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
MY + L ++GR + MKE G D Y LI F + A EL +E
Sbjct: 355 MYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEM 414
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+E G+ D+ + L+ + G E++ M + S +V+G+ K
Sbjct: 415 KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKI 474
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++ + G P V Y ++I+ C+ G A ++F EM++K V ++++
Sbjct: 475 DEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNAL 534
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ A L+ +M+ + C P+ + LM+
Sbjct: 535 LKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 41/258 (15%)
Query: 34 KIGDSEKVAALFLECESRK-LDLTPSSTHMYKILCDSLGKSGRAFEILKFF--RDMKEKG 90
++GD+ +V L+ SR+ LD+ P + ++ D L KSGR E L F R G
Sbjct: 187 RVGDALRV----LDGMSRQDLDIRPDVVTLNTVV-DGLCKSGRVQEALAFVEQRMSSVHG 241
Query: 91 ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
+ Y LI +F + + +A EL ++ E +G+ +++ +V G L
Sbjct: 242 CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL 301
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
E F ++R W K VTY++++ A
Sbjct: 302 EF----------------------FREKRTVWPEGKG-----------NAVTYSTLVGAL 328
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
A ++F E +G + Y +M++ + GR+ DA + + MK G + +
Sbjct: 329 LHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDT 388
Query: 271 WIYNSLMDMHGRAKNLRQ 288
YN L+ R K L +
Sbjct: 389 KAYNILIAGFCRKKRLHE 406
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++EKM S G D+ Y ++ + G E ++ + L T Y IL
Sbjct: 341 FHEKM-SEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL---DTKAYNILIA 396
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ R E + ++MKE GI D Y +L+ + +EL + + G
Sbjct: 397 GFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQP 456
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ F LV Y + G +++ L ++ SM + ++ ++ I +++ KR A++++
Sbjct: 457 SVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELF 516
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSK--AEKVFIEMQQKGFDKCVVAYSSM----- 241
+++ + +P VT NA + GL K EK F M Q ++C Y ++
Sbjct: 517 DEM-KEKSVPANVT---TFNALLK-GLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571
Query: 242 -VAMYGKTGRIRDAMR 256
+ + G+T R++ M+
Sbjct: 572 WLPVIGETDRLKRFMQ 587
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 131/275 (47%), Gaps = 6/275 (2%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L E+MKSAG D+ + I+ A GD + R + P+ Y
Sbjct: 7 HAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHL-----RSMGCDPNVV-TY 60
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + ++ + E +K +M+E+G + Y L+ + ++ V A+++ K+ E
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G ++ F LV + + G V+ +++ M + + +++G K + +
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +V E++ + G P TY+++I+ C+ +AE++ M G VV YSS++
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 240
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ K+G++ +A + + +M+ + P+V YN+++D
Sbjct: 241 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVID 275
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 121/239 (50%), Gaps = 5/239 (2%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TP + Y L L K+ + E + R M G D VY+S+I +F ++ A
Sbjct: 193 VTPDA-FTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEA 251
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVN 173
++ +E ++ D+ + ++ + G + + +++ M+ + + D ++ ++N
Sbjct: 252 QKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVIN 311
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G K A K+ +++ GC P VTY +II+ C+ G +AE + M++ G
Sbjct: 312 GLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 371
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
VV Y+++++ K ++ +A R++ +M+ GC PN+ YN++++ + GR K +QL
Sbjct: 372 NVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQL 430
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 112/230 (48%), Gaps = 1/230 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L KS + E + +MK G+ D Y++LI +++ AE++ +
Sbjct: 165 YSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 224
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G D+ V+ ++ + + G + + + ++ M+ + +++G K
Sbjct: 225 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 284
Query: 183 AAVKVYEQLISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + +Q+ G +P VTY+++IN C+ + +A+K+ M + G + VV Y+++
Sbjct: 285 EAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 344
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ K GR+ +A L+ MK GC PNV Y +L+ +A+ + + E+
Sbjct: 345 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAER 394
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 129/274 (47%), Gaps = 12/274 (4%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL---DLTPSSTHMYKILC 67
E+MK++G+ D+ Y ++ K E+ + R++ TP +Y +
Sbjct: 186 EEMKASGVTPDAFTYSALIHGLCKADKIEEAEQML-----RRMAGSGCTPDVV-VYSSII 239
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG-M 126
+ KSG+ E K ++M+++ D Y ++I + ++ A+ + + +E G +
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L D+ + ++ + M+ + ++++ M A N I++G K A
Sbjct: 300 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEY 359
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + + GC P VTY ++I+ C+ +AE+V EM+ G +V Y++MV
Sbjct: 360 LLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLC 419
Query: 247 KTGRIRDAMRLVAKMKP--KGCEPNVWIYNSLMD 278
+GRI++A +LV +MK C P+ Y ++++
Sbjct: 420 VSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVN 453
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G + LE++E MK+A I+ + A+ + L S GC P VTY
Sbjct: 4 GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTY 60
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
++I A+ R +A K+ EM+++G +V Y+ +V K + A +V KM
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
G PNV +NSL+D + N+ K ++ A M
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGM 158
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 12/208 (5%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ K+G + A + L+ D+ P Y + + L KS E K
Sbjct: 270 YNTVIDGLCKLGKIAE-AQVILDQMQESGDVLPDVV-TYSTVINGLCKSDMLVEAQKLLD 327
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M + G D Y ++I ++ AE L + + G ++ + L+ +
Sbjct: 328 RMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKAR 387
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ------GCIP 198
V++ V+E M+NA + +VNG +K +QL+ + C P
Sbjct: 388 KVDEAERVMEEMRNAGCPPNLVTYNTMVNGL----CVSGRIKEAQQLVQRMKDGRAECSP 443
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEM 226
TY +I+NA L +AE++ +M
Sbjct: 444 DAATYRTIVNALMSSDLVQEAEQLLEQM 471
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 148/336 (44%), Gaps = 49/336 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G+ D+G Y ++ + G ++V + E + L+ P Y +L D
Sbjct: 219 FQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLE--PDCI-TYALLLDY 275
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+GR E FF M KGI D ++YA L+ +A+ + G+ +
Sbjct: 276 LCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPN 335
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY 188
+F + Y ++ M+E+ + + M+ L+ D +S +++ K AV +
Sbjct: 336 RRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLS-PDVVSFGALIDALCKLGRVDDAVLQF 394
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF------------DKC-- 234
Q+I++G P ++S++ C +G + KAE++F E+ +G + C
Sbjct: 395 NQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNE 454
Query: 235 ---------------------VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
V++Y+++VA + TGRI +A +L+ M G +PN + Y
Sbjct: 455 GRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTY 514
Query: 274 NSLMDMHGRAKNLRQ---------LEKYTTVISAYN 300
L+ + +A+ + ++ T V++ YN
Sbjct: 515 TILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYN 550
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 119/266 (44%), Gaps = 3/266 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G D Y ++ F++ G EK LFLE + + P + Y + D L
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGI---PPNVVTYTTVIDGLC 207
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+ F+ M ++G+ D Y LI + S + K ++ +E G+ D
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCI 267
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + G + +SM + I ++++G++ + A + +
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ G P + + + AY + + +A +F +M+Q+G VV++ +++ K GR+
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRV 387
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
DA+ +M +G PN+++++SL+
Sbjct: 388 DDAVLQFNQMINEGVTPNIFVFSSLV 413
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 133/329 (40%), Gaps = 31/329 (9%)
Query: 38 SEKVAALFL----ECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
SE+V +LF EC S+ + P++ Y IL + GR F + + G
Sbjct: 68 SERVVSLFTRMARECSSK---VAPNAC-TYSILIGCFCRMGRLEHGFAAFGLILKTGWRV 123
Query: 94 DPSVYASLICSFASIAEVKVAEE-LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
+ V + L+ V A + L E G D+ + ++ + EG VEK +
Sbjct: 124 NVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNL 183
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
M + + + +++G K + A V++Q+I +G P TY +I+ Y
Sbjct: 184 FLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLS 243
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
G + + ++ EM G + + Y+ ++ K GR R+A M KG +P+V I
Sbjct: 244 TGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAI 303
Query: 273 Y----------NSLMDMH---------GRAKNLRQLEKYTTVISAYNMAREFDMCVKFYN 313
Y +L +MH G + N R + + AY + + +N
Sbjct: 304 YAILLHGYATKGALSEMHSFLDLMVGNGVSPNRR---IFNIMFCAYAKKAMIEEAMHIFN 360
Query: 314 EFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ R G D G ++ KL ++++
Sbjct: 361 KMRQQGLSPDVVSFGALIDALCKLGRVDD 389
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 134/310 (43%), Gaps = 48/310 (15%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS----S 59
+ +H + KM+ G+ D + +++A K+G + F + + +TP+ S
Sbjct: 353 EEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINE--GVTPNIFVFS 410
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
+ +Y LC ++GK +A E+ F ++ ++GI D + +L+C+ + V A+ L
Sbjct: 411 SLVYG-LC-TVGKWEKAEEL---FFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLID 465
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
G+ ++ + LV + G +++ ++++ M + L ++ +++ G+ K R
Sbjct: 466 LMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKAR 525
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC----- 234
A ++ +++ +G P TY +I++ + G +S+A ++++ M KC
Sbjct: 526 RVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSR-TKCDIYTY 584
Query: 235 -------------------------------VVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
V ++ M+ K GR DAM L A +
Sbjct: 585 NIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISA 644
Query: 264 KGCEPNVWIY 273
G P+V Y
Sbjct: 645 YGLVPDVVTY 654
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%)
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+GR E K M G+ + Y L+ + V A LF+E KG+ +
Sbjct: 489 TGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVAT 548
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ + G + E+ +M N+ +I+NG K A K++ +L
Sbjct: 549 YNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLC 608
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S+ VT+ +I A + G A +F + G VV Y + + G +
Sbjct: 609 SKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLG 668
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLM 277
+ L + M+ G PN + N+L+
Sbjct: 669 EFDGLFSAMEKSGTAPNSHMLNALV 693
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 134/282 (47%), Gaps = 13/282 (4%)
Query: 4 QSKLHYYEKMKSA--GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
Q L + E+ S+ G ++ Y +++AF ++G+ L + E+ + P +
Sbjct: 226 QEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGV---PQNIV 282
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKE-----KGILEDPSVYASLICSFASIAEVKVAEE 116
+ L ++GR L+FFR+ + KG + Y++L+ + V +A E
Sbjct: 283 TLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKG---NAVTYSTLVGALLHTNNVGMAME 339
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF E +G D ++ ++ + G +E + SMK A + +++ GF
Sbjct: 340 LFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFC 399
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+++ A ++ +++ G P TY ++++ C+ G ++ +++ +M G V+
Sbjct: 400 RKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVI 459
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ ++V Y K G+I +A+R++ M G PN IYN+L+D
Sbjct: 460 TFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLID 501
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
MY + L ++GR + MKE G D Y LI F + A EL +E
Sbjct: 355 MYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEM 414
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+E G+ D+ + L+ + G E++ M + S +V+G+ K
Sbjct: 415 KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKI 474
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++ + G P V Y ++I+ C+ G A ++F EM++K V ++++
Sbjct: 475 DEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNAL 534
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ A L+ +M+ + C P+ + LM+
Sbjct: 535 LKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 41/258 (15%)
Query: 34 KIGDSEKVAALFLECESRK-LDLTPSSTHMYKILCDSLGKSGRAFEILKFF--RDMKEKG 90
++GD+ +V L+ SR+ LD+ P + ++ D L KSGR E L F R G
Sbjct: 187 RVGDALRV----LDGMSRQDLDIRPDVVTLNTVV-DGLCKSGRVQEALAFVEQRMSSVHG 241
Query: 91 ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
+ Y LI +F + + +A EL ++ E +G+ +++ +V G L
Sbjct: 242 CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL 301
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
E F ++R W K VTY++++ A
Sbjct: 302 EF----------------------FREKRTVWPEGKG-----------NAVTYSTLVGAL 328
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
A ++F E +G + Y +M++ + GR+ DA + + MK G + +
Sbjct: 329 LHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDT 388
Query: 271 WIYNSLMDMHGRAKNLRQ 288
YN L+ R K L +
Sbjct: 389 KAYNILIAGFCRKKRLHE 406
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++EKM S G D+ Y ++ + G E ++ + L T Y IL
Sbjct: 341 FHEKM-SEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL---DTKAYNILIA 396
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ R E + ++MKE GI D Y +L+ + +EL + + G
Sbjct: 397 GFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQP 456
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ F LV Y + G +++ L ++ SM + ++ ++ I +++ KR A++++
Sbjct: 457 SVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELF 516
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSK--AEKVFIEMQQKGFDKCVVAYSSM----- 241
+++ + +P VT NA + GL K EK F M Q ++C Y ++
Sbjct: 517 DEM-KEKSVPANVT---TFNALLK-GLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571
Query: 242 -VAMYGKTGRIRDAMR 256
+ + G+T R++ M+
Sbjct: 572 WLPVIGETDRLKRFMQ 587
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 115/276 (41%), Gaps = 37/276 (13%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP-SSTHMYKILCDSLG 71
M G D+ Y +++ K G E+ AL+ E +RK T Y L D L
Sbjct: 138 MLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLC 197
Query: 72 KSGRAFEILKFFRDMK-EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+GR E + F D E+G + D Y S+I + V+ E F E +G D
Sbjct: 198 KAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 257
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +GF K + A +VY Q
Sbjct: 258 VTYAALI-----------------------------------DGFMKAKMIPKAHRVYRQ 282
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G + VTY I++ C+ G ++A F+ M+++G VV YS+++ + G
Sbjct: 283 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGN 342
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ A+ L +M +GCEPN+ YN ++ RA L
Sbjct: 343 VSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 378
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 140/307 (45%), Gaps = 12/307 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYK---IGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ +M++ G D+ Y +++ F K I + +V L+ T ST Y I+
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG------TVVSTVTYNII 298
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K+GR E F M+E+G + Y++L+ F S V A ELF+ ++G
Sbjct: 299 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 358
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR-RAYWAAV 185
+L + ++ G + K E + L ++G +R V
Sbjct: 359 EPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGV 418
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+++E ++SQG P +Y+ +++ CR G A ++F EM +G VV +++++
Sbjct: 419 ELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWL 478
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA-RE 304
GR+ +A+ + +++ + P+ W Y SL+D R + + + + + A R
Sbjct: 479 CIAGRVDEALEVFRELERRSA-PDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPRH 537
Query: 305 FDMCVKF 311
+D+ V+F
Sbjct: 538 YDLTVRF 544
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 7/245 (2%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+T Y L D L K+GR E + M EKG Y +I + V+ A +
Sbjct: 75 PTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 134
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV---VESMKNAELNISDCIS-CVIVN 173
F + G D V+ L+ + G E+ + + K+ + D ++ +++
Sbjct: 135 FVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLID 194
Query: 174 GFSKRRAYWAAVKVY-EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
G K A +V+ ++ + +G IP VTY SII+ C++G + + F EM+ +G++
Sbjct: 195 GLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 254
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
V Y++++ + K I A R+ +M G + YN ++D G K R E Y
Sbjct: 255 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD--GLCKAGRVAEAY 312
Query: 293 TTVIS 297
T ++
Sbjct: 313 ATFLA 317
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 69/149 (46%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ F ++ E +++ V+E A V ++G K A ++
Sbjct: 6 DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ + C+P VTY ++++ + G +A V +M +KG + Y+ ++ K
Sbjct: 66 KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA 125
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ +A R+ M GC P+ ++Y +L+
Sbjct: 126 GRVEEARRIFVDMLGNGCRPDAFVYTALI 154
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 23/219 (10%)
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
V+ ++++ M + + +V+G K A+ V EQ++ +G P TY
Sbjct: 58 VDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTV 117
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV----AKM 261
+I+ + G +A ++F++M G Y++++ K+G+ +A L A+
Sbjct: 118 VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARK 177
Query: 262 KPKGCEPNVWIYNSLMD---MHGRAKNLRQL--------------EKYTTVISAY-NMAR 303
P+V Y SL+D GR RQ+ YT++I + R
Sbjct: 178 HHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGR 237
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ C +F+ E R G D ++ F K I +
Sbjct: 238 VEEGCERFH-EMRNRGYEPDAVTYAALIDGFMKAKMIPK 275
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 16/163 (9%)
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C P V + +IN CR +A V + G + V Y+ + K R+ DA
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVISAY 299
+L+ KM K C P Y +L+D +A L + L+ YT VI
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 300 NMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ A + + + + NG D + ++ K + EE
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEE 165
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 138/286 (48%), Gaps = 20/286 (6%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS-----STH 61
L + KMK GI Y +M V+A+F++ R ++ S
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLMNGL--------VSAMFVDSAERVFEVMESGRIKPDVV 258
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + K+G+ + L+ R M+ KG+ D Y ++I + + ++ L++E
Sbjct: 259 TYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEM 318
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRR 179
+EKG+ F ++ +EG + + V E+M K ++ N++ I V+++G++K
Sbjct: 319 DEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVA--IYTVLIDGYAKTG 376
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+ A+++ ++I +G P VTY+ ++N C+ G +A F + G + YS
Sbjct: 377 SVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYS 436
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGR 282
S++ GK GR+ +A RL +M KGC + + YN+L+D HG+
Sbjct: 437 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGK 482
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 141/337 (41%), Gaps = 23/337 (6%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
CY +++ D +++ F+ E RK + P + L S GK G E+L +
Sbjct: 154 CYVSLVDVLALAKDVDRIR--FICSEIRKFEF-PMTVSPGNSLIKSFGKLGMVEELLWVW 210
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
R MKE GI Y L+ S V AE +F+ E + D+ + ++ Y +
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKA 270
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G +K LE + M+ L ++ + + V +Y+++ +G +
Sbjct: 271 GQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAF 330
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+ +I C+ G ++ VF M +KG V Y+ ++ Y KTG + DA+RL+ +M
Sbjct: 331 SLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMID 390
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEK------------------YTTVISAYNMAREF 305
+G P+V Y+ +++ G KN R E Y+++I A
Sbjct: 391 EGFNPDVVTYSVVVN--GLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRV 448
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
D + + E G D ++ F+K +++E
Sbjct: 449 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDE 485
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 13/263 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYKILC 67
+E M G + Y +++ + K G E L R +D P Y ++
Sbjct: 350 FENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLL----HRMIDEGFNPDVV-TYSVVV 404
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ L K+GR E + +F+ + G+ + Y+SLI V AE LF+E EKG
Sbjct: 405 NGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCT 464
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE-LNISDCISCVIVNGFSKRRAYWAAVK 186
RD + L+ + + G V++ L + + M+ E + + ++++G K A+K
Sbjct: 465 RDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALK 524
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--FDKCVVAYSSMVAM 244
+++ +I +G P ++ C G ++A K+ E+ G D A M+
Sbjct: 525 LWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVILD---AACEDMINT 581
Query: 245 YGKTGRIRDAMRLVAKMKPKGCE 267
K GRI++A +L + +G E
Sbjct: 582 LCKAGRIKEACKLADGITERGRE 604
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 5/275 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G D Y ++ K GD + +L + E K++ + +Y + D L
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE---ADVVIYNTIIDGL 268
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + L F +M KGI D Y+SLI + A L + E+ + ++
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +++EG + + ++ + M ++ ++NGF A ++E
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+IS+ C P VTY+++I +C+ + ++F EM Q+G V Y++++ + +
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+A + +M G PN+ YN L+D G KN
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLD--GLCKN 481
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 123/271 (45%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ + +M + GI D Y ++ G + L + RK++ + + L
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN---PNVVTFSAL 334
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K G+ E K + +M ++ I D Y+SLI F + A+ +F+ K
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L+ + + VE+ +E+ M L + +++GF + R A
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V++Q++S G P +TY +++ C+ G +KA VF +Q+ + + Y+ M+
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++ D L + KG PNV YN+++
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 151/327 (46%), Gaps = 19/327 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M++ GI D Y + F + S+ AL + + KL P + +L +
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCR--RSQLSLALAVLAKMMKLGYEPDIVTLSSLL-NGY 163
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
S R + + M E G D + +LI + A L + ++G DL
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V + G ++ L +++ M+ ++ I I++G K + A+ ++ +
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ ++G P TY+S+I+ C G +S A ++ +M ++ + VV +S+++ + K G+
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGR---AKNLRQLE----------KYTT 294
+ +A +L +M + +P+++ Y+SL++ MH R AK++ +L Y+T
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGV 321
+I + A+ + ++ + E G V
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLV 430
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ +++AF K G + L+ E R +D Y L + R E F
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSID---PDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M K + Y++LI F V+ ELF+E ++G++ + + L+ + +
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ V + M + ++ + ++++G K A+ V+E L P TY
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+I C+ G ++F + KG V+AY++M++ + + G +A L+ KMK
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 265 GCEPNVWIYNSLM 277
G PN YN+L+
Sbjct: 568 GPLPNSGTYNTLI 580
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+++ +K + + + EQ+ + G TY+ IN +CR S A V +M + G
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ +V SS++ Y + RI DA+ LV +M G +P+ + + +L +HG
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL--IHG 197
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S G+ + Y +++ K G K +F + ++ + Y I+ +
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME---PDIYTYNIMIEG 512
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K+G+ + + F ++ KG+ + Y ++I F + A+ L K+ +E G L +
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+ L+ + +G E + E+++ M++
Sbjct: 573 SGTYNTLIRARLRDGDREASAELIKEMRS 601
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 137/303 (45%), Gaps = 19/303 (6%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK G+ + Y ++ F+K+ D +LF E + Y L LG
Sbjct: 255 EMKENGMQPTTKIYTMLITLFFKLDDVHGALSLF---EEMRHQYCRPDVFTYTELIRGLG 311
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+GR E FF +M+ +G D V ++I + A +LF+E G LR +
Sbjct: 312 KAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEM---GTLRCIP 368
Query: 132 VFLK----LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + ++ + + E MK + ++ S ++++GF K A+ +
Sbjct: 369 SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMML 428
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
E++ +G P Y S+I+A + Y A ++F E+++ Y+ M+ GK
Sbjct: 429 LEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGK 488
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-------KNLRQLEKYTTV--ISA 298
GR+ DA+ + +M GC P+V+ YN+LM R +R+++++ + I++
Sbjct: 489 AGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINS 548
Query: 299 YNM 301
YN+
Sbjct: 549 YNI 551
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 118/286 (41%), Gaps = 20/286 (6%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
T Y L + K GR + +MKE G+ +Y LI F + +V A L
Sbjct: 228 PDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSL 287
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F+E + D+ + +L+ + G +++ M+ + ++N K
Sbjct: 288 FEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGK 347
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINA-YCRIGLYSKAEKVFIEMQQKGFDKCVV 236
A+K+++++ + CIP VTY +II A + S+ F M++ G
Sbjct: 348 AGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSF 407
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
YS ++ + KT R+ AM L+ +M KG P Y SL+D G+AK
Sbjct: 408 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK------------ 455
Query: 297 SAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+D+ + + E + N G + +M+ K ++++
Sbjct: 456 -------RYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 494
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 39/239 (16%)
Query: 40 KVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKG-ILEDPSVY 98
K A+F + ++RK T + + I+ G+ G+ E+ + +M +G D Y
Sbjct: 177 KAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHEL---YNEMSTEGHCFPDTMTY 233
Query: 99 ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
++LI +F + A +L E +E GM +++ L+ ++ +
Sbjct: 234 SALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFK---------------- 277
Query: 159 AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK 218
+ D V+G A+ ++E++ Q C P TY +I + G +
Sbjct: 278 ----LDD------VHG---------ALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDE 318
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
A F EMQ++G V ++M+ GK GR+ DAM+L +M C P+V YN+++
Sbjct: 319 AYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTII 377
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 114/270 (42%), Gaps = 2/270 (0%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H++ +M+ G D+ ++ K G + LF E + L PS I+
Sbjct: 321 HFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGT--LRCIPSVVTYNTIIK 378
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
RA E+ +F MKE GI Y+ LI F ++ A L +E +EKG
Sbjct: 379 ALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFP 438
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ L+ + + E+ + +K + S + V++ K A+ +
Sbjct: 439 PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINM 498
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++++ GC P Y ++++ R G+ +A MQ+ G + +Y+ ++ K
Sbjct: 499 FDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAK 558
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
TG AM +++ MK P+V YN+++
Sbjct: 559 TGGPHRAMEMLSNMKQSTVRPDVVSYNTVL 588
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 93/237 (39%), Gaps = 38/237 (16%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M G YC +++A K + LF E K + SS +Y ++ L
Sbjct: 430 EEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL---KENCGSSSARVYAVMIKHL 486
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK+GR + + F +M + G D Y +L+ A + A + +E G + D+
Sbjct: 487 GKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDI 546
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +I+NG +K A+++
Sbjct: 547 NSY-----------------------------------NIILNGLAKTGGPHRAMEMLSN 571
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ P V+Y +++ A G++ +A K+ EM GF+ ++ YSS++ GK
Sbjct: 572 MKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
Query: 181 YWAAVKVYEQLISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
Y ++Y ++ ++G C P +TY+++I+A+C++G A ++ EM++ G Y+
Sbjct: 210 YGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYT 269
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
++ ++ K + A+ L +M+ + C P+V+ Y L+ G+A + + + Y
Sbjct: 270 MLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFF-----Y 324
Query: 300 NMARE 304
M RE
Sbjct: 325 EMQRE 329
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 116/251 (46%), Gaps = 18/251 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + DSL K+ R + FF++++ KGI + Y +L+ + + A L +
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+K + ++ + L+ +++ G V + E+ E M ++ ++NG
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++ ++S+GC+ V+Y ++IN +C+ K+F EM Q+G V Y++++
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-----------------DMHGRAKN 285
+ + G + A ++M G P++W YN L+ DM R +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 286 LRQLEKYTTVI 296
L + YTTVI
Sbjct: 433 L-DIVTYTTVI 442
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 1/223 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TP+ Y L D+ K+G+ E + F +M I D Y+SLI + A
Sbjct: 256 ITPNVIT-YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
++F KG L D+ + L+ + + VE +++ M L + ++ G
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F + A + + Q+ G P TY ++ C G KA +F +MQ++ D
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+V Y++++ KTG++ +A L + KG +P++ Y ++M
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K+ R + +K FR+M ++G++ + Y +LI F +V A+E F + +
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ + L+ + G +EK L + E M+ E+++ ++ G K
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ L +G P VTY ++++ C GL + E ++ +M+Q+G K S
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD-- 510
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
G I + L+ KM G P++
Sbjct: 511 ------GDITLSAELIKKMLSCGYAPSL 532
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 118/293 (40%), Gaps = 51/293 (17%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + + R + + M E G D Y ++I S V A + FKE E KG
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ ++ + LV NG + A
Sbjct: 221 IRPNVVTYTALV-----------------------------------NGLCNSSRWSDAA 245
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++ +I + P +TY+++++A+ + G +A+++F EM + D +V YSS++
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK------- 291
RI +A ++ M KGC +V YN+L++ +AK + R++ +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y T+I + A + D +F+++ G D I++G ++E+
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N F A+ + +++ G P +VT S++N +CR S A + +M +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G+ +VAY++++ KT R+ DA +++ KG PNV Y +L++
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 3/163 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + + +M G+V ++ Y +++ F++ GD +K F + + ++P Y
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF--FGISP-DIWTY 403
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL L +G + L F DM+++ + D Y ++I +V+ A LF
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC 166
KG+ D+ + ++ +G++ + + MK L +DC
Sbjct: 464 KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
T+ +IN +C S A + +M + G++ V S+V + + R+ DA+ LV KM
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G +P++ YN+++D + K +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVND 208
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 5/279 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
K+ G V + Y ++ + K GD +K L+ ++L P+ Y IL DS
Sbjct: 355 KVGRFGFVPNLFVYNALINSLCKGGDLDKAELLY--SNMSLMNLRPNGI-TYSILIDSFC 411
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+SGR + +F M + GI E Y SLI ++ AE LF E KG+
Sbjct: 412 RSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTAT 471
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F L+ Y ++ V+K ++ M + + + +++G A +++++L
Sbjct: 472 TFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDEL 531
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ + P +VTY +I YCR G KA ++ +M QKG Y +++ TGR+
Sbjct: 532 VERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRV 591
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
A + + + + N Y++L +HG + R +E
Sbjct: 592 SKAKDFIDDLHKQNVKLNEMCYSAL--LHGYCQEGRLME 628
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E+ DL S Y +L L K R E ++ R + KG+ D Y +L+ F +
Sbjct: 252 EANGFDL---SIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRL 308
Query: 109 AEVKVAEELFKEAEEKGM-----------------------------------LRDLEVF 133
+ + +L E E G + +L V+
Sbjct: 309 QQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVY 368
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ + G ++K + +M L + ++++ F + A+ ++++I
Sbjct: 369 NALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQ 428
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
G Y S+IN C+ G S AE +FIEM KG + ++S+++ Y K +++
Sbjct: 429 DGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQK 488
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLM 277
A +L KM G PNV+ + +L+
Sbjct: 489 AFKLYNKMIDNGITPNVYTFTALI 512
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 141/346 (40%), Gaps = 48/346 (13%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q Y KM GI + + ++ + + LF E RK+ T + Y
Sbjct: 487 QKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVT---Y 543
Query: 64 KILCDSL---GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+L + GK +AFE+L+ DM +KG++ D Y LI S V A++ +
Sbjct: 544 NVLIEGYCRDGKIDKAFELLE---DMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDD 600
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEG-----------MVEKTL------------------- 150
++ + + + L+ Y +EG M+++ +
Sbjct: 601 LHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPD 660
Query: 151 -----EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
++++ M + L + I +++ +SK ++ A + ++ ++++ C P VTY +
Sbjct: 661 RKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTA 720
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
++N C+ G +A +F MQ + Y + K G +++A+ L M KG
Sbjct: 721 LMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KG 779
Query: 266 CEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
N +N + + G K L + + T V+S F CV +
Sbjct: 780 LLANTVTHNII--IRGFCK-LGRFHEATKVLSEMTENGIFPDCVTY 822
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 125/283 (44%), Gaps = 5/283 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMYKI 65
+ Y+++M GI Y ++ K GD +LF+E ++ ++ T ++ T +
Sbjct: 420 ISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISG 479
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
C L + +AF K + M + GI + + +LI S ++ A ELF E E+
Sbjct: 480 YCKDL-QVQKAF---KLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK 535
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ + L+ Y +G ++K E++E M L +++G A
Sbjct: 536 IKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAK 595
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ L Q ++ Y+++++ YC+ G +A EM Q+G + +V ++ ++
Sbjct: 596 DFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGA 655
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
K + L+ M +G P+ IY S++D + + + ++
Sbjct: 656 LKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKK 698
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 119/301 (39%), Gaps = 37/301 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M G+V D+ Y ++ G K + + + L Y L
Sbjct: 564 EDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMC---YSALLHGY 620
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ GR E L +M ++GI D +A LI + K +L K+ ++G+ D
Sbjct: 621 CQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDN 680
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK----RRA-----Y 181
++ ++ Y +EG +K E + M E + ++NG K RA
Sbjct: 681 VIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKR 740
Query: 182 WAAVKVYEQLISQGC-------------------------IPGQVTYASIINAYCRIGLY 216
A V I+ GC + VT+ II +C++G +
Sbjct: 741 MQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRF 800
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+A KV EM + G V YS+++ Y ++G + +++L M +G EP++ YN L
Sbjct: 801 HEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLL 860
Query: 277 M 277
+
Sbjct: 861 I 861
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 109/244 (44%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
SST + +L + S R F+ + + M +L + ++L+ + + EL
Sbjct: 153 SSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWEL 212
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F E+ G+ D +V E + E + M+ ++S V+++G K
Sbjct: 213 FDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCK 272
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
AV+V L +G VTY +++ +CR+ + ++ EM + GF A
Sbjct: 273 GDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAA 332
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
S +V K G+I DA LV K+ G PN+++YN+L++ + +L + E + +S
Sbjct: 333 VSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMS 392
Query: 298 AYNM 301
N+
Sbjct: 393 LMNL 396
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 16/252 (6%)
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
R M+ G Y LI V A E+ + KG+ D+ + LVL +
Sbjct: 249 RWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRL 308
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
E +++++ M + ++ +V+G K+ A ++ ++ G +P Y
Sbjct: 309 QQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVY 368
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
++IN+ C+ G KAE ++ M + YS ++ + ++GR+ A+ +M
Sbjct: 369 NALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQ 428
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDM 307
G V+ YNSL++ + +L E +T++IS Y +
Sbjct: 429 DGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQK 488
Query: 308 CVKFYNEFRMNG 319
K YN+ NG
Sbjct: 489 AFKLYNKMIDNG 500
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 10/261 (3%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M GI +D C+ +++ K D + L + + L P + +Y + D+
Sbjct: 635 EMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGL--RPDNV-IYTSMIDTYS 691
Query: 72 KSG---RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G +AFE M + + Y +L+ E+ A LFK + +
Sbjct: 692 KEGSFKKAFECWDL---MVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPP 748
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + + +EG +++ + + +M L + +I+ GF K + A KV
Sbjct: 749 NSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLL-ANTVTHNIIIRGFCKLGRFHEATKVL 807
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ G P VTY+++I YCR G + K++ M +G + +VAY+ ++
Sbjct: 808 SEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVN 867
Query: 249 GRIRDAMRLVAKMKPKGCEPN 269
G + A L M +G P+
Sbjct: 868 GELDKAFELRDDMLRRGIIPD 888
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 122/236 (51%), Gaps = 3/236 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ + + KS +V + Y +++ + K E+ LF E ++ L+L ++ +Y L
Sbjct: 581 VNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLEL---NSVVYNTL 637
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ ++G E K DM+ KGI + Y+SLI +I ++ A+ L E ++G+
Sbjct: 638 IRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGL 697
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L ++ + L+ Y + G ++K + V++ M + +++ + V+++G+SK A K
Sbjct: 698 LPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 757
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ +++ +G +P VTY + N +C+ G + K+ M Q+G + Y+++V
Sbjct: 758 LLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLV 813
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 144/341 (42%), Gaps = 22/341 (6%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + EKM G+ Y ++ K+ + ++ E + TP+
Sbjct: 296 NLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEK--GFTPNEV- 352
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L D K G + L+ DM KGI + S+I F I +++ AE + +E
Sbjct: 353 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 412
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G + F ++ E L + M + +D + +V G K +
Sbjct: 413 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 472
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AV+++ +L+ +G VT ++I+ C+ G +A ++ +M ++GF + Y+++
Sbjct: 473 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 532
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
++ K G++ + +L +M +G EP+ + YN L +HG +
Sbjct: 533 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL--IHGMCR----------------- 573
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ D V +NE + V + G+M+ + K +IEE
Sbjct: 574 IGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 614
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 121/277 (43%), Gaps = 3/277 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q + +KM G VLD Y ++ K G E+ L E K + P T
Sbjct: 506 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEE--GFKLRGEMVKQGIEPD-TF 562
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y +L + + G+ E + + + K + ++ + Y +I + +++ E+LF E
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 622
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ + + V+ L+ Y G + ++ + M++ + + +++G
Sbjct: 623 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 682
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + +++ +G +P V Y ++I YC++G K V EM + Y+ M
Sbjct: 683 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 742
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ Y K+G ++ A +L+ +M KG P+ YN L +
Sbjct: 743 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN 779
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 119/280 (42%), Gaps = 19/280 (6%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L K G+ E K +M ++GI D Y LI I ++ A L+ E +
Sbjct: 529 YNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 588
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ ++ ++ + ++ Y + +E+ ++ + L ++ + ++ + +
Sbjct: 589 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTV 648
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K+++ + S+G P TY+S+I+ C IG A+ + EM+++G VV Y++++
Sbjct: 649 EAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALI 708
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
Y K G++ + ++ +M PN YT +I Y+ +
Sbjct: 709 GGYCKLGQMDKVVNVLQEMSSYDIHPNKI-------------------TYTVMIDGYSKS 749
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ K +E G V D ++ F K +IEE
Sbjct: 750 GDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 789
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 147/363 (40%), Gaps = 51/363 (14%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMYKILC---- 67
M S GI +S I++ F KIG E+ + E SR + P + T + LC
Sbjct: 377 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 436
Query: 68 ---------------------------DSLGKSGRAFEILKFFRDMKEKGILEDPSVYAS 100
L K G+ + ++ + + EKG + +
Sbjct: 437 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNA 496
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
LI ++ A L K+ E+G + D + L+ +EG VE+ ++ M
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
+ ++++G + AV ++ + S+ +P TY +I+ YC+ + E
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
K+F E+ + + V Y++++ Y + G +A +L M+ KG P Y+SL +H
Sbjct: 617 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL--IH 674
Query: 281 GRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
G N+ ++E +I +E R G + + ++G + KL Q+
Sbjct: 675 GMC-NIGRMEDAKCLI----------------DEMRKEGLLPNVVCYTALIGGYCKLGQM 717
Query: 341 EEL 343
+++
Sbjct: 718 DKV 720
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 119/267 (44%), Gaps = 31/267 (11%)
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ L KS FE ++ +G+ D ++++ I +F +V+ A +LF + E+ G+
Sbjct: 226 NELEKSYWVFETMR-------QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVS 278
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ + L+ + G +++ E M +N + V++NG K + A V
Sbjct: 279 PNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSV 338
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ + +G P +V Y ++I+ YC++G A ++ +M KG + V +S++ + K
Sbjct: 339 LKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCK 398
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDM 307
G++ A ++ +M +G N +TT+I M F+
Sbjct: 399 IGQMEQAECILEEMLSRGFSINPG-------------------AFTTIIHWLCMNSRFES 439
Query: 308 CVKFYNE-----FRMNGGVIDRAMAGI 329
++F E R N G++ + G+
Sbjct: 440 ALRFLREMLLRNMRPNDGLLTTLVGGL 466
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 76/179 (42%), Gaps = 3/179 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N+ ++ M+S GI + Y ++ IG E L E RK L P+
Sbjct: 646 NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLI--DEMRKEGLLPNVV- 702
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L K G+ +++ ++M I + Y +I ++ ++K A +L E
Sbjct: 703 CYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 762
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
KG++ D + L + +EG +E+ ++ + M L + + +V+G+ + A
Sbjct: 763 VGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSA 821
>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 689
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 107/208 (51%), Gaps = 3/208 (1%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G+ RAFE+ F+ M+++GI D Y++LI + + + +LF +A KG+ D+
Sbjct: 192 GEMDRAFEL---FKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 248
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
VF + +Y++ G + +V + M ++ + +++ G + + A +Y Q
Sbjct: 249 VVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQ 308
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ +G P VTY+S+I+ +C+ G ++ +M + G+ VV Y +V K G
Sbjct: 309 ILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGL 368
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ A+R K + PNV ++NSL+D
Sbjct: 369 MLHALRFSVKTLGQSIRPNVVVFNSLID 396
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
P + + D+L + G + L F R + E+G D V + I S+ +++VA
Sbjct: 105 VPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVD-IVSCNKILKGLSVDQIEVAS 163
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ + G ++ F L+ + + G +++ E+ + M+ + +++G+
Sbjct: 164 RMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGY 223
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K K++ Q + +G V ++S I+ Y + G + A V+ M +G V
Sbjct: 224 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNV 283
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
V Y+ ++ + GRI +A + ++ +G EP+V Y+SL+D + NLR
Sbjct: 284 VTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRS 336
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 16/278 (5%)
Query: 18 IVLDSG------CYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILCDS 69
+VLD G +C ++ F K G+ ++ LF E R + DL ST L D
Sbjct: 168 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYST-----LIDG 222
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+G K F KG+ D V++S I + + A +++K +G+ +
Sbjct: 223 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPN 282
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ ++G + + + + L S +++GF K + +YE
Sbjct: 283 VVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYE 342
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I G P V Y +++ C+ GL A + ++ + VV ++S++ + +
Sbjct: 343 DMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLN 402
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAK 284
R +A+++ M G +P+V +LM M GR K
Sbjct: 403 RCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLK 440
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 90/224 (40%), Gaps = 11/224 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +M G+ D+ +C +M+AF K LF + K+ P+ + ++
Sbjct: 443 LFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKI---PADIAVCNVV 499
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L K E KFF ++ E + D Y ++IC + S+ + A +F+ +
Sbjct: 500 INLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPF 559
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ L+ + ++ L ++ + I D G KR A
Sbjct: 560 GPNAVTLTILIHTLCKNSDMDGALRIISPSIISYSIIID--------GLCKRGRVDEATN 611
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ Q I +P V YA +I C++G +A ++ M + G
Sbjct: 612 IFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNG 655
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 3/255 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N +S YE M G D Y +++ K G + AL ++ + P+
Sbjct: 333 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQG--LMLHALRFSVKTLGQSIRPNVV- 389
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
++ L D + R E LK FR M GI D + +L+ +K LF
Sbjct: 390 VFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRM 449
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G+ D F L+ + + L++ + M+ ++ + V++N K ++
Sbjct: 450 FKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSV 509
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K + L+ P VTY ++I YC + +A ++F ++ F V + +
Sbjct: 510 EEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTIL 569
Query: 242 VAMYGKTGRIRDAMR 256
+ K + A+R
Sbjct: 570 IHTLCKNSDMDGALR 584
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 134/282 (47%), Gaps = 13/282 (4%)
Query: 4 QSKLHYYEKMKSA--GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
Q L + E+ S+ G ++ Y +++AF ++G+ L + E+ + P +
Sbjct: 226 QEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGV---PQNIV 282
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKE-----KGILEDPSVYASLICSFASIAEVKVAEE 116
+ L ++GR L+FFR+ + KG + Y++L+ + V +A E
Sbjct: 283 TLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKG---NAVTYSTLVGALLHTNNVGMAME 339
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF E +G D ++ ++ + G +E + SMK A + +++ GF
Sbjct: 340 LFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFC 399
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+++ A ++ +++ G P TY ++++ C+ G ++ +++ +M G V+
Sbjct: 400 RKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVI 459
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ ++V Y K G+I +A+R++ M G PN IYN+L+D
Sbjct: 460 TFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLID 501
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
MY + L ++GR + MKE G D Y LI F + A EL +E
Sbjct: 355 MYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEM 414
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+E G+ D+ + L+ + G E++ M + S +V+G+ K
Sbjct: 415 KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKI 474
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++ + G P V Y ++I+ C+ G A ++F EM++K V ++++
Sbjct: 475 DEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNAL 534
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ A L+ +M+ + C P+ + LM+
Sbjct: 535 LKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 41/258 (15%)
Query: 34 KIGDSEKVAALFLECESRK-LDLTPSSTHMYKILCDSLGKSGRAFEILKFF--RDMKEKG 90
++GD+ +V L+ SR+ LD+ P + ++ D L KSGR E L F R G
Sbjct: 187 RVGDALRV----LDGMSRQDLDIRPDVVTLNTVV-DGLCKSGRVQEALAFVEQRMSSVHG 241
Query: 91 ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
+ Y LI +F + + +A EL ++ E +G+ +++ +V G L
Sbjct: 242 CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL 301
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
E F ++R W K VTY++++ A
Sbjct: 302 EF----------------------FREKRTVWPEGKG-----------NAVTYSTLVGAL 328
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
A ++F E +G + Y +M++ + GR+ DA + + MK G + +
Sbjct: 329 LHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDT 388
Query: 271 WIYNSLMDMHGRAKNLRQ 288
YN L+ R K L +
Sbjct: 389 KAYNILIAGFCRKKRLHE 406
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 11/232 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++EKM S G D+ Y ++ + G E ++ + L T Y IL
Sbjct: 341 FHEKM-SEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL---DTKAYNILIA 396
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ R E + ++MKE GI D Y +L+ + +EL + + G
Sbjct: 397 GFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQP 456
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ F LV Y + G +++ L ++ SM + ++ ++ I +++ KR A++++
Sbjct: 457 SVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELF 516
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSK--AEKVFIEMQQKGFDKCVVAY 238
+++ + +P VT NA + GL K EK F M Q ++C Y
Sbjct: 517 DEM-KEKSVPANVT---TFNALLK-GLRDKNMPEKAFELMDQMREERCFPDY 563
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 154/347 (44%), Gaps = 53/347 (15%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTH 61
L +++ + + G LD Y ++ K+G++ L R++D L +
Sbjct: 144 HQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLL-----RRVDGNLVQPNVV 198
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
MY + D + K + + +M KGI + Y++LI F ++ ++K A +LF +
Sbjct: 199 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKM 258
Query: 122 EEKGMLRDLEVFLKLV----------------LMYIEEGM-------------------V 146
+ + D+ F LV M +++G+ V
Sbjct: 259 ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEV 318
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
K ++ +M +N ++++GF K + A+ +++++ + IP VTY S+
Sbjct: 319 NKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSL 378
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+ C++G S A K+ EM +G ++ YSS++ K ++ A+ L+ K+K +G
Sbjct: 379 IDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 438
Query: 267 EPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYN 313
PN++ Y L+D G K R LE A+N+ D+ VK YN
Sbjct: 439 RPNMYTYTILID--GLCKGGR-LE------DAHNIFE--DLLVKGYN 474
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 130/323 (40%), Gaps = 48/323 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
Y +M S GI + Y ++ F+ +G + LF + E+ K D+ + + IL
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDV-----YTFNILV 274
Query: 68 DSLGKSGRAFEILKFFR-----------------------------------DMKEKGIL 92
D K G+ E F M ++G+
Sbjct: 275 DGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVN 334
Query: 93 EDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
D Y LI F I +V A LFKE K ++ D+ + L+ + G + L++
Sbjct: 335 PDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKL 394
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
V+ M + + I++ K A+ + +L QG P TY +I+ C+
Sbjct: 395 VDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCK 454
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
G A +F ++ KG++ V Y+ M+ + G +A+ L++KMK C P+
Sbjct: 455 GGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVT 514
Query: 273 YNSLM------DMHGRAKNLRQL 289
Y ++ D + +A+ LR++
Sbjct: 515 YEIIIRSLFDKDENDKAEKLREM 537
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 139/350 (39%), Gaps = 39/350 (11%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILCDSLGKSGRAFEILKF 82
Y I F+ D +LF SR L + TP + KIL SL KS +L
Sbjct: 44 YSSISTTFHNNNDVVDAFSLF----SRLLRQNPTPPAIEFNKIL-GSLVKSKHYHTVLSL 98
Query: 83 FRDMKEKGI------LEDPS----------VYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ M+ +GI + P + +LI ++ A G
Sbjct: 99 SQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGF 158
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ + G L+++ + + + + I++G K + A
Sbjct: 159 QLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFD 218
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+Y +++S+G P VTY+++I+ + +G A +F +M + V ++ +V +
Sbjct: 219 LYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFC 278
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH------GRAKNL----------RQLE 290
K G++++ + A M +G +PNV Y SLMD + +AK++ ++
Sbjct: 279 KDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQ 338
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y +I + ++ D + + E + D ++ KL +I
Sbjct: 339 SYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKI 388
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 3/266 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G++ D Y I+ + G ++ + S D + Y L + L K
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS---DGVEPNVVTYSSLMNYLCK 318
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+GR+ E K F M ++G+ D + Y +L+ +A+ + L G+ D V
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F L+ Y ++ V++ + V M+ LN + +++ K + A+ +EQ+I
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P + Y S+I+ C + KAE++ +EM +G + ++S++ + K GR+
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 498
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +L M G +P++ YN+L+D
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLID 524
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 5/275 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH + G D Y ++ F+K GDS+K + + E R + P Y +
Sbjct: 186 LHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGI--LPDVV-TYSSI 242
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+L K+ + ++ M + G++ D Y S++ + S + K A K+ G+
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 302
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L+ + G + ++ +SM L ++ G++ + A
Sbjct: 303 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHA 362
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + ++ G P + +I AY + +A VF +M+Q G + VV Y +++ +
Sbjct: 363 LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
K+G + DAM +M +G PN+ +Y SL +HG
Sbjct: 423 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSL--IHG 455
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 40/259 (15%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S ++ K LCD +S A E+L D + G D Y +++ F + A
Sbjct: 165 SYNNLLKGLCDE-NRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYST 223
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCIS-CVIVNGF 175
+ E ++G+L D+ + ++ + ++K +EV+ +M KN + DC++ I++G+
Sbjct: 224 YHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM--PDCMTYNSILHGY 281
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
A+ +++ S G P VTY+S++N C+ G ++A K+F M ++G + +
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341
Query: 236 VAYSSMVAMYGKTG-----------------------------------RIRDAMRLVAK 260
Y +++ Y G ++ AM + +K
Sbjct: 342 ATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401
Query: 261 MKPKGCEPNVWIYNSLMDM 279
M+ G PNV Y +++D+
Sbjct: 402 MRQHGLNPNVVCYGTVIDV 420
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 148/383 (38%), Gaps = 54/383 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+KM+S G+ + Y +M K G S + +F R L+ Y+ L
Sbjct: 295 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE---PDIATYRTLLQGY 351
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G E+ M GI D V+ LIC++A +V A +F + + G+ ++
Sbjct: 352 ATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNV 411
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESM-------------------------KNAE----- 160
+ ++ + + G V+ + E M AE
Sbjct: 412 VCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILE 471
Query: 161 -LNISDCISCV----IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
L+ C++ + I++ K + K+++ ++ G P +TY ++I+ C G
Sbjct: 472 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 531
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+A K+ M G +V Y +++ Y + R+ DA+ L +M G PN+ YN
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591
Query: 276 LMD--MHGR------------AKNLRQLEKYTTVISAYNMARE--FDMCVKFYNEFRMNG 319
++ H R K+ QLE T I + + + D ++ + +
Sbjct: 592 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 651
Query: 320 GVIDRAMAGIMVGVFSKLSQIEE 342
++ IM+G K +++E
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDE 674
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 4/269 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y+E+M G+ + Y ++ +K L LE R + L +T + + D
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL---NTIFFNSIID 489
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
S K GR E K F M G+ D Y +LI ++ A +L G+
Sbjct: 490 SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 549
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ Y ++ L + + M ++ ++ + +I+ G R AA ++Y
Sbjct: 550 DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 609
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ G TY I++ C+ L +A ++F + ++ M+ K
Sbjct: 610 VSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKC 669
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ +A L A G P+V Y SLM
Sbjct: 670 GRMDEAKDLFAAHSANGLVPDVRTY-SLM 697
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 111/271 (40%), Gaps = 13/271 (4%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+M GI L++ + I+++ K G +SEK+ L + + +T Y L D
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT------YNTLID 524
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+G+ E K M G+ D Y +LI + ++ + A LFKE G+
Sbjct: 525 GCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSP 584
Query: 129 DLEVFLKLV--LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + ++ L + K L V + +L +S +I++G K A++
Sbjct: 585 NIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS--TYNIILHGLCKNNLTDEALR 642
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ L T+ +I A + G +A+ +F G V YS M
Sbjct: 643 MFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLI 702
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G + + L M+ GC + + NS++
Sbjct: 703 EQGSLEELDDLFLSMEENGCSADSRMLNSIV 733
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 178 RRAYWAAVKVYEQLISQGC---IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
R + AAV Y ++ G P TYA +I CR G + +KGF
Sbjct: 67 RHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVD 126
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLV-AKMKPKGCEPNVWIYNSLM 277
+ ++ ++ R DAM +V +M GC P+V+ YN+L+
Sbjct: 127 AITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLL 170
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 143/315 (45%), Gaps = 23/315 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M+ GI D + ++ YK G E L + L L P + ++ I
Sbjct: 394 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV--LGLLPDRS-LFDISVSG 450
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L +GR E ++F DM EKG+ + S+I +++ A E +K G+
Sbjct: 451 LCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPS 510
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L++ G +++ E++ M L++++ V+++ F KR A ++
Sbjct: 511 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 570
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P V +++ I+ + GL +A VF+EM +KG AY+S++ + K G
Sbjct: 571 EMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCG 630
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSL-----------------MDMHGRAKNLRQLEKY 292
++ +A++L M+ +G P+++ N + MDMH + + Y
Sbjct: 631 KLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLS-PDIITY 689
Query: 293 TTVISAYNMAREFDM 307
T+I+ Y + FDM
Sbjct: 690 NTLINGY--CKAFDM 702
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 3/227 (1%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
LTPS + +L L +GR E + M EKG+ + + L+ F +V A
Sbjct: 507 LTPSPSTCSSLLM-GLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGA 565
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+ L+ E E +G+ D+ F + ++G+VE+ V M L ++ ++ G
Sbjct: 566 QSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICG 625
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K A+K+ + + +G +P T II C+ G A VF++M Q G
Sbjct: 626 FCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPD 685
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ Y++++ Y K + +A LV +M G P++ YN + +HG
Sbjct: 686 IITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYN--IRIHG 730
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 110/267 (41%), Gaps = 38/267 (14%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G+ +++ + +++ F+K GD +L+ E E R + P + D L
Sbjct: 536 QMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR--GIFPDVV-AFSAFIDGLS 592
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G E F +M KG++ + Y SLIC F ++ A +L K +G+L D+
Sbjct: 593 KQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIF 652
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ +I+ G K+ +A+ V+ +
Sbjct: 653 T-----------------------------------TNMIIGGLCKQGRMRSAINVFMDM 677
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
G P +TY ++IN YC+ A+ + M G + + Y+ + + + R+
Sbjct: 678 HQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRM 737
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A+ ++ ++ G PN YNS+++
Sbjct: 738 NRAVLMLDELVSAGIVPNTVTYNSMLN 764
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 106/237 (44%), Gaps = 3/237 (1%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
F+ L+ M+E G+ S A L + + +LFK+ +G F
Sbjct: 212 GFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSG 271
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
++L + +G + ++ M + +++N R A+ + +I +G
Sbjct: 272 IILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERG 331
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C P VT+ ++INA+C+ G +A K+F +++ GF + Y++++ Y K I A
Sbjct: 332 CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQAN 391
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEKYTTVISAYNMAREFDMCV 309
L +M+ KG P+ +N L+ H GR ++ +L K +V+ FD+ V
Sbjct: 392 MLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISV 448
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ + ++ K G E K F +KE G + +Y +L+ + + E+ A L++E
Sbjct: 339 FNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMR 398
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+KG+ D F LV + + G E +++ + L + + V+G
Sbjct: 399 KKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLD 458
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ ++ +G P + + S+I AY + GL KA + + M G SS++
Sbjct: 459 EAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLL 518
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR+++A L+ +M KG N + L+D
Sbjct: 519 MGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 554
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 92/230 (40%), Gaps = 16/230 (6%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D V L+ ++ M + LE++ M+ + S ++ + Y K++
Sbjct: 195 DFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLF 254
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ +I +G P + T++ II +CR G E + M + + AY+ ++
Sbjct: 255 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------Y 292
GR DA+ M +GC P V +N++++ + N+ + K Y
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
T+++ Y RE D Y E R G D I+V K + E+
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREED 424
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 123/301 (40%), Gaps = 44/301 (14%)
Query: 18 IVLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
++++ GC + ++ AF K G+ + LF +++ +P++ MY L +
Sbjct: 326 LMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL--KEMGFSPNAI-MYNTLMNGYV 382
Query: 72 KSGRAFEILKFFRDMKEKGI-----------------------------------LEDPS 96
K + + +M++KGI L D S
Sbjct: 383 KMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRS 442
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
++ + + A E + EKG+ + F ++ Y + G+ +K E + M
Sbjct: 443 LFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLM 502
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ L S ++ G S A ++ Q+I +G + + +++ + + G
Sbjct: 503 VHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDV 562
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A+ ++ EM+++G VVA+S+ + K G + +A + +M KG PN + YNSL
Sbjct: 563 VGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSL 622
Query: 277 M 277
+
Sbjct: 623 I 623
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 101/230 (43%), Gaps = 3/230 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ ++ GR + L +F M E+G + ++I +F V A +LF +
Sbjct: 304 YNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLK 363
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G + ++ L+ Y++ +++ + E M+ + ++V+G K
Sbjct: 364 EMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREE 423
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ + + G +P + + ++ C G +A + ++M +KG ++A++S++
Sbjct: 424 DGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVI 483
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRAKNLRQL 289
A Y + G A M G P+ +SL + ++GR + +L
Sbjct: 484 AAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATEL 533
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 145/320 (45%), Gaps = 19/320 (5%)
Query: 39 EKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVY 98
E+ + FL+ ++ P S + L L K GR KFF+DM GI Y
Sbjct: 3 EEASECFLKMRKFRVFPKPRSCN---ALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTY 59
Query: 99 ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+I ++++A LF + +E G D+ + L+ + + G++++ + + E MK+
Sbjct: 60 NIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD 119
Query: 159 AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK 218
A+ + ++N F K A + ++ + G P VTY++ I+A+C+ G+ +
Sbjct: 120 ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQE 179
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A K F++M++ Y+S++ K G + +A++LV ++ G + NV Y +L+D
Sbjct: 180 AIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 239
Query: 279 ---MHGRAKNLRQL-------------EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVI 322
GR K ++ E YT ++ + A+E + E +
Sbjct: 240 GLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKP 299
Query: 323 DRAMAGIMVGVFSKLSQIEE 342
D + G ++ S++EE
Sbjct: 300 DLLLYGTILWGLCNESRLEE 319
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+++ M +AGI Y +++ K GD E +LF + ++ TP Y L D
Sbjct: 43 FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLF--TQMKEAGFTPDIV-TYNSLID 99
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
GK G E + F MK+ D Y +LI F + A E E + G+
Sbjct: 100 GHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKP 159
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + + + +EGM+++ ++ M+ L ++ +++ K A+K+
Sbjct: 160 NVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLV 219
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E+++ G VTY ++++ C G +AE+VF M G Y+++V + K
Sbjct: 220 EEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKA 279
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ A ++ +MK K +P++ +Y +++
Sbjct: 280 KEMEYAKDILKEMKEKCIKPDLLLYGTIL 308
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 141/319 (44%), Gaps = 7/319 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MK AG D Y +++ K+G ++ +F + + D Y L +
Sbjct: 79 FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD---PDVITYNALINC 135
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K R + +F +MK G+ + Y++ I +F ++ A + F + + +
Sbjct: 136 FCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 195
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G + + L++VE + A + ++ +++G + A +V+
Sbjct: 196 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 255
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ G P Q TY ++++ + + A+ + EM++K ++ Y +++
Sbjct: 256 AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNES 315
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKN-LRQLEKYTTVISAYNMAREF 305
R+ +A L+ ++K G N IY +LMD + G+A L LE+ ++ F
Sbjct: 316 RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCF 375
Query: 306 DMCVKFYNEFRMNGGVIDR 324
++ K ++E G + D+
Sbjct: 376 EVAKKLFDEMLDKGMMPDK 394
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 34/306 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MK A D Y ++ F K E++ F K + + Y D+
Sbjct: 114 FEQMKDADCDPDVITYNALINCFCKF---ERMPKAFEFLHEMKANGLKPNVVTYSTFIDA 170
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLI---CSFASIAE-VKVAEELFKEAEEKG 125
K G E +KFF DM+ + + Y SLI C ++AE +K+ EE+ + G
Sbjct: 171 FCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEIL----QAG 226
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ ++ + L+ EEG +++ EV +M NA + + +V+GF K + A
Sbjct: 227 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 286
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ +++ + P + Y +I+ C +A+ + E+++ G + V Y++++ Y
Sbjct: 287 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAY 346
Query: 246 GKTGRIRDAMRL------------------VAK-----MKPKGCEPNVWIYNSLMDMHGR 282
K+G+ +A+ L VAK M KG P+ Y +L+D + +
Sbjct: 347 FKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMK 406
Query: 283 AKNLRQ 288
NL++
Sbjct: 407 HGNLQE 412
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 126/320 (39%), Gaps = 61/320 (19%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + ++ M+ + + Y +++A K G+ + L E + L + Y
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVT---Y 234
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D L + GR E + FR M G+ + Y +L+ F E++ A+++ KE +E
Sbjct: 235 TALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 294
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI------------ 171
K + DL ++ ++ E +E+ ++ +K + +N + I +
Sbjct: 295 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE 354
Query: 172 -----------VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN------------ 208
V+G K + A K++++++ +G +P ++ Y ++I+
Sbjct: 355 ALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEAL 414
Query: 209 ----------------AYCRI-------GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
AY + G KA + EM KG V Y ++ Y
Sbjct: 415 NLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKY 474
Query: 246 GKTGRIRDAMRLVAKMKPKG 265
G++ +A+ L +M +G
Sbjct: 475 YALGKVDEALELQNEMAKRG 494
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS-STHMYKILCD 68
+++M G++ D Y +++ K G+ ++ L R +++ H Y L
Sbjct: 382 FDEMLDKGMMPDKIAYTALIDGNMKHGNLQEA----LNLRDRMIEIGMELDLHAYTALIW 437
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L SG+ + +M KG+L D VY LI + ++ +V A EL E ++GM+
Sbjct: 438 GLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMIT 497
Query: 129 DL 130
L
Sbjct: 498 GL 499
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 147/326 (45%), Gaps = 23/326 (7%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++M G+V D CY +++ F+K GD +K ++ E + + P+ Y I+
Sbjct: 206 LKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIW-ERLVKDCSVYPNVV-TYNIM 263
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L K GR E L+ + M + +D Y+SLI + A ++KE E +
Sbjct: 264 INGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSL 323
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEV--VESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ D ++ + G ++++ E+ V +N + +S +++ G + A
Sbjct: 324 VVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVS---YNILIKGLFENGKVEEA 380
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++E L +GC P TY +I+ C+ G +KA K+F E + AYSSMV
Sbjct: 381 ISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDG 440
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLE------- 290
K GR+ +A+ +V +M +G + + + N L++ RA L R++E
Sbjct: 441 LCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPT 500
Query: 291 --KYTTVISAYNMAREFDMCVKFYNE 314
Y T+I A F F E
Sbjct: 501 IVSYNTLIKGLCKAERFSEAYSFVKE 526
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 127/280 (45%), Gaps = 6/280 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + Y+++ + +V+D+ + ++ F + G ++ L++ S
Sbjct: 307 NIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVS--- 363
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL L ++G+ E + + + +KG + + Y LI + A ++FKEA
Sbjct: 364 -YNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEA 422
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E+ D + +V +EG +++ + +V M + + ++NGF +
Sbjct: 423 EDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKL 482
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+ + ++ +GC P V+Y ++I C+ +S+A EM +K + ++ S +
Sbjct: 483 EDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLL 542
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ + +I A+ L + KG +P++ +YN L MHG
Sbjct: 543 MDGLCQEKKIEMALNLWQQALDKGFKPDITMYNIL--MHG 580
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 118/306 (38%), Gaps = 44/306 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILC 67
+E + G +S Y ++ K G K +F E E KLD + Y +
Sbjct: 384 WELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLD-----AYAYSSMV 438
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D L K GR E + M ++G DP V LI F ++++ A F+E E KG
Sbjct: 439 DGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCS 498
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVK 186
+ + L+ + + V+ M E D I+C ++++G + + A+
Sbjct: 499 PTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWK-PDMITCSLLMDGLCQEKKIEMALN 557
Query: 187 VYEQLISQG-----------------------------------CIPGQVTYASIINAYC 211
+++Q + +G C+P VT +++
Sbjct: 558 LWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLY 617
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
++ Y KA +++ + + G +++Y+ + RI DA+ + +G P
Sbjct: 618 KVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAV 677
Query: 272 IYNSLM 277
+N L+
Sbjct: 678 TWNILV 683
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 108/246 (43%), Gaps = 20/246 (8%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y +L+ +F + E AE + E + +L+ + L+ + ++ +EK + +++ M
Sbjct: 119 YNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMW 178
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ L ++NG K A+KV++++ +G + Y +I+ + + G Y
Sbjct: 179 SQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYD 238
Query: 218 KAEKVFIEMQQK-GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
K ++++ + + VV Y+ M+ K GR +++ + +M E +++ Y+SL
Sbjct: 239 KGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSL 298
Query: 277 MDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+HG + A D V+ Y E + V+D M+ F +
Sbjct: 299 --IHGLCE-----------------AGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCR 339
Query: 337 LSQIEE 342
+I+E
Sbjct: 340 AGKIKE 345
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/135 (17%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ-GCIPGQVTY 203
+V +V+ +K + + ++ ++ ++K + A+ ++ + GC PG +Y
Sbjct: 60 LVSHVSRIVDIVKAQKCPCKEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSY 119
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+++NA+ + + +AE + + Y+ ++ + K +I A+ L+ M
Sbjct: 120 NTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWS 179
Query: 264 KGCEPNVWIYNSLMD 278
+ +P+V+ Y +L++
Sbjct: 180 QNLKPDVFSYGTLIN 194
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 16/262 (6%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D + + Y IL +L G E L RDM+ G + Y +L+ +F EV
Sbjct: 184 DGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDG 243
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
AE L E G+ +L F +V + G +E +V + M L +V
Sbjct: 244 AERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVG 303
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G+ K A+ V+ ++ +G +P VT+ S+I+ C+ G +A + +M+++G
Sbjct: 304 GYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQM 363
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL- 289
V +++++ + K G + DA+ V MK +P+V YN+L++ M GR R+L
Sbjct: 364 NEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELL 423
Query: 290 ------------EKYTTVISAY 299
Y+T+ISAY
Sbjct: 424 HEMEAKGLKPDVVTYSTIISAY 445
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L K+G + E L F +M +KGI+ D + SLI ++ A L ++
Sbjct: 298 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR 357
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G+ + F L+ + ++G ++ L V MK + S ++NG+
Sbjct: 358 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMD 417
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ ++ ++G P VTY++II+AYC+ A ++ +M +KG + YSS++
Sbjct: 418 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 477
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ R+ DA L M G +P+ + Y SL+D H + N+
Sbjct: 478 RVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNV 521
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 28/266 (10%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSST--HMYKILCDSLGKSGRAFEI 79
CY ++ + +G ++ L E E++ L D+ ST Y CD+ AFE+
Sbjct: 402 CYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT----HSAFEL 457
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+ M EKG+L D Y+SLI + A LFK + G+ D + L+
Sbjct: 458 ---NQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 514
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
+ +EG VE L + + M A + + D ++ V++NG SK A ++ +L + IP
Sbjct: 515 HCKEGNVESALSLHDKMVKAGV-LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIP 573
Query: 199 GQVTYASIIN---------------AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
Y ++++ +C GL ++A+KV+ M + ++ YS ++
Sbjct: 574 ANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIH 633
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPN 269
+ + G + A+ +M G PN
Sbjct: 634 GHCRAGNVMKALSFHKQMLQGGFAPN 659
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 4/203 (1%)
Query: 95 PSVYA-SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
PSV A + + S A + A F G+ ++ + LV G ++ L ++
Sbjct: 154 PSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSIL 213
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M+ A + +V F + A ++ + G P VT+ S++N C+
Sbjct: 214 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKA 273
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G A KVF EM ++G V+Y+++V Y K G +A+ + A+M KG P+V +
Sbjct: 274 GKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF 333
Query: 274 NSLMDMHGRAKNLRQLEKYTTVI 296
SL+ + +A N LE+ T++
Sbjct: 334 TSLIHVMCKAGN---LERAVTLV 353
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + +M+ G+ ++ + +++ F K G + AL ++ + PS
Sbjct: 345 NLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDD--ALLAVRGMKQCRIKPSVV- 401
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L + GR E + +M+ KG+ D Y+++I ++ + A EL ++
Sbjct: 402 CYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQM 461
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
EKG+L D + L+ + E + + ++M L + +++G K
Sbjct: 462 LEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNV 521
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
+A+ ++++++ G +P VTY+ +IN + +A+++ ++
Sbjct: 522 ESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 566
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G +P + Y +++ A L S A + F M G V Y+ +V G ++A
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ ++ M+ GC PNV YN+L+ RA + E+
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAER 246
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 134/307 (43%), Gaps = 18/307 (5%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
++L L+P Y + SL + + K + + ++G+L D Y ++I ++
Sbjct: 142 KRLALSPKC---YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGS 198
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
+ +A F+ E GM D L+L Y G + K ++ M ++ +
Sbjct: 199 LAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTI 258
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ G + R A+ + ++ GC P TY +I C+ G A + EM ++G
Sbjct: 259 LIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRG 318
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD--MHGRAKNLRQ 288
V Y++M+ Y K+GR++DA+ + M+ GC P+ W YNSL+ G+ +
Sbjct: 319 VVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDEAEE 378
Query: 289 LEK-------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
L +T +I+ Y A + D ++ + + +D G+++ V
Sbjct: 379 LLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLI 438
Query: 336 KLSQIEE 342
K +++E
Sbjct: 439 KKHRLKE 445
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 6/266 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM+ GI Y +++ K + + LF E LTP Y +L D+L
Sbjct: 522 KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQN--GLTPDE-QAYNVLTDALC 578
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
KSGRA E F + +KG++ Y SL+ F+ + A L ++ +G D
Sbjct: 579 KSGRAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSH 635
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ ++ + + L +++ M + + +I++ K + A ++ ++
Sbjct: 636 TYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEM 695
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
IS G P +TY I++YC+IG +A + EM++ G VV Y+ + G G +
Sbjct: 696 ISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYM 755
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
A + +M CEPN W Y L+
Sbjct: 756 DCAFSTLKRMIDASCEPNYWTYWLLL 781
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 139/325 (42%), Gaps = 25/325 (7%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
KI D+ +V ++ + + KLDL Y +L L K R E ++ G+
Sbjct: 407 KIDDALRVKSIMISSKC-KLDL-----QAYGVLISVLIKKHRLKEAKDTLNEIFANGLSP 460
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ +Y S+I ++ + +V A E+FK E +G + + L+ I++ + K + ++
Sbjct: 461 NVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALI 520
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M+ + ++ G K+ + A +++E + G P + Y + +A C+
Sbjct: 521 TKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKS 580
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G +AE+ + + +KG V Y+S+V + K G A L+ KM +GC+ + Y
Sbjct: 581 G---RAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTY 637
Query: 274 NSLMDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDMCVKFYNEFRM 317
+ L+ + K L + + YT +IS + D +NE
Sbjct: 638 SVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMIS 697
Query: 318 NGGVIDRAMAGIMVGVFSKLSQIEE 342
+G + + + K+ +IEE
Sbjct: 698 SGHKPSAITYTVFISSYCKIGRIEE 722
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 109/285 (38%), Gaps = 20/285 (7%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S Y + D KSGR + L M+ G D Y SLI + AEEL
Sbjct: 321 PSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEEL 379
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
A +G + F ++ Y + ++ L V M +++ + V+++ K
Sbjct: 380 LNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIK 439
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ + G P V Y SII+AYC++G A +VF + +G
Sbjct: 440 KHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWT 499
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
YSS++ + ++ AM L+ KM+ G P V YTT+I
Sbjct: 500 YSSLIYGLIQDQKLHKAMALITKMQEDGITPGVIT-------------------YTTLIQ 540
Query: 298 AYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
EFD + + NG D ++ K + EE
Sbjct: 541 GQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEE 585
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 19/284 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y + G+VL Y +++ F K G++E AAL E + + +H Y +L +
Sbjct: 587 YSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALI---EKMVNEGCKADSHTYSVLLQA 643
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K + E L M +G+ + Y +I + A+ +F E G
Sbjct: 644 LCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPS 703
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + Y + G +E+ ++ M+ + V +NG A +
Sbjct: 704 AITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLK 763
Query: 190 QLISQGCIPGQVTYASIINAYCRIGL-------------YSKAEKVFI---EMQQKGFDK 233
++I C P TY ++ + ++ L + K + V+ M + G +
Sbjct: 764 RMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNP 823
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V YSS++A + K R+ +A L+ M K PN IY L+
Sbjct: 824 TAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 867
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 160/343 (46%), Gaps = 32/343 (9%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM-YKILCD 68
+ +M+ G+ + C+ ++EA + G+ + +++ E L P+ T + Y++ +
Sbjct: 130 FTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEM----LKTGPAPTEVTYQVYIN 185
Query: 69 SLGKSGRAFEILKFFRDMKEKG-ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+L K+ R + + F+ + E D +Y ++ ++ + + LF++ + G+
Sbjct: 186 ALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVP 245
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ F L+ + V + M+ A++ ++N +SK R A V
Sbjct: 246 MTVVTFNSLMAF---QKTVADAEACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHVV 302
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC---VVAYSSMVAM 244
+ ++++ G P ++ Y ++++AY + AE +F M G D+C + +Y++++A
Sbjct: 303 FREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSM---GQDRCRPDIRSYTTLLAA 359
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLEK------ 291
Y TG ++ A RL+ +MK G EPNV Y +LM D++ + L+K
Sbjct: 360 YANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPN 419
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNGGVID-RAMAGIM 330
+T ++ + +F+ + ++ + +G D R+ A +M
Sbjct: 420 STIFTLLVRTFGQQEDFESALSWFKKMLDSGCPADQRSRAALM 462
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 160 ELNISDCISCV--IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
E+ + ++C ++ ++ + A +Y++++ G P +VTY INA C+ ++
Sbjct: 135 EVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINALCKAERFN 194
Query: 218 KAEKVFIEMQQKGFDKCVVA------YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
AE++F K D+ A Y+ M+ YGK G+ + L +MK G V
Sbjct: 195 DAERIF-----KCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPMTVV 249
Query: 272 IYNSLMDMHGRAKN----LRQLE---------KYTTVISAYNMAREFDMCVKFYNEFRMN 318
+NSLM + LR ++ YT +I+AY+ AR + + E +
Sbjct: 250 TFNSLMAFQKTVADAEACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFREMVAS 309
Query: 319 GGVIDRAMAGIMVGVFSKLSQIE 341
G R ++ ++K ++E
Sbjct: 310 GLRPSRIAYNTLLDAYAKCKEVE 332
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 102/269 (37%), Gaps = 41/269 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MK AG+ + + +M AF K + ++ K D+ Y L ++
Sbjct: 236 FRQMKGAGVPMTVVTFNSLM-AFQKTVADAEACLRHMQAAKIKPDVI-----TYTGLINA 289
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ R E FR+M G+ Y +L+ ++A EV+ AE LFK + D
Sbjct: 290 YSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPD 349
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y G ++K +++ MK A
Sbjct: 350 IRSYTTLLAAYANTGNMKKAERLLKRMKQA------------------------------ 379
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
G P VTY +++ Y + + + F ++Q+ G ++ +V +G+
Sbjct: 380 -----GLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQE 434
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A+ KM GC + +LMD
Sbjct: 435 DFESALSWFKKMLDSGCPADQRSRAALMD 463
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEM----QQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G+V+ ++ R+ +K V + QQ ++ + ++ M+A YGK G+ A
Sbjct: 67 GKVSKGDVLGTLIRLRQLNKWTMVLEVLLWLKQQDWWNFGIHDFNLMIAAYGKLGQPGIA 126
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+M+ G EPNV + SL++ H R N + E
Sbjct: 127 ELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAE 162
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G+ E + R+M +GI D +Y +LI F + V A LF E +++ + D
Sbjct: 233 LCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD 292
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + G V + ++ M L + +++G+ K A ++
Sbjct: 293 FITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHN 352
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q++ G P VTY ++ + C+ G A ++ EM +KG + + Y+S+V K G
Sbjct: 353 QMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAG 412
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
I A++L+ M+ G P+ Y +LMD + +++ +
Sbjct: 413 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 449
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 153/373 (41%), Gaps = 54/373 (14%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M S GI D Y +++ F K+G+ LF E + RK+ +P ++C L
Sbjct: 248 EMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKI--SPDFITYTAVIC-GLC 304
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLI----------------------------C 103
++GR E K F +M K + D Y +LI
Sbjct: 305 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIV 364
Query: 104 SFASIA-------EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
++ ++A EV A EL E KG+ ++ + LV + G +++ +++++ M
Sbjct: 365 TYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM 424
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ A + +++ + K R A ++ Q++ + P VT+ ++N +C G+
Sbjct: 425 EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 484
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
EK+ M +KG Y+S++ Y +R + M KG P+ YN L
Sbjct: 485 EDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL 544
Query: 277 MDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGG 320
+ H +A+N+++ + Y +I + ++F + + + R G
Sbjct: 545 IKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGL 604
Query: 321 VIDRAMAGIMVGV 333
V DR + I +
Sbjct: 605 VADREIYNIFADI 617
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%), Gaps = 16/242 (6%)
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
+LK +M+ KG+ +P Y +I +V AE + +E +G+ D ++ L+
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
+ + G V + + M+ +++ ++ G + A K++ +++ + P
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 326
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
+VTY ++I+ YC+ G +A + +M Q G +V Y+++ K G + A L+
Sbjct: 327 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELL 386
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMA 302
+M KG E N++ YNSL++ +A N+ Q K YTT++ AY +
Sbjct: 387 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 446
Query: 303 RE 304
RE
Sbjct: 447 RE 448
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 124/271 (45%), Gaps = 3/271 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G+ + Y + + K G+ + L E + L+L + + Y L +
Sbjct: 351 HNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL---NIYTYNSLVNG 407
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G + +K +DM+ G D Y +L+ ++ E+ A EL ++ ++ +
Sbjct: 408 LCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 467
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ + GM+E ++++ M + + ++ + R A ++Y
Sbjct: 468 VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYR 527
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ ++G +P TY +I +C+ +A + +M KGF+ V +Y++++ + K
Sbjct: 528 GMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRK 587
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ +A L +M+ +G + IYN D++
Sbjct: 588 KFLEARELFEQMRREGLVADREIYNIFADIN 618
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 151/339 (44%), Gaps = 31/339 (9%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M+ GI S Y ++ A+ D E+ + + + +++ S Y I+
Sbjct: 325 FESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGVEM---SLVTYSIVVGG 381
Query: 70 LGKSGRAFEILK------FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
K G A + R+M+E+GI +Y +++ + I + +FK +E
Sbjct: 382 FAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKE 441
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G + + L+ MY + G V K LEV + M++A + + +++NGF K + +
Sbjct: 442 CGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTN 501
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A V+E +I G P V Y +II A+C +G +A + EMQ+K + ++
Sbjct: 502 AFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIH 561
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
+ + G +R A+ + M+ GC P V +N+L + G + RQ+EK
Sbjct: 562 GFARAGEMRRALEIFDMMRRSGCIPTVHTFNAL--VLGLVEK-RQMEKAVEILDEMALAG 618
Query: 292 -------YTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
YTT+++ Y + +++ + R G +D
Sbjct: 619 VSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELD 657
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 158/349 (45%), Gaps = 26/349 (7%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS---THMYKILCDS 69
M+SAGI + Y ++ F K+ D +F + K L P ++ K C
Sbjct: 474 MESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDV--IKDGLKPDVVLYNNIIKAFC-G 530
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+G RA ++K +M++K + +I FA E++ A E+F G +
Sbjct: 531 MGNMDRAIHMVK---EMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPT 587
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F LVL +E+ +EK +E+++ M A ++ + I+NG++ A + +
Sbjct: 588 VHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFT 647
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L ++G TY +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 648 KLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRG 707
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLE---------KYT 293
+ +A L+ +MK +G +P++ Y S + DM K ++++E YT
Sbjct: 708 DVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYT 767
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAG-IMVGVFSKLSQIE 341
T+I + A + ++ + E ++ G D+A+ +M + S+ + E
Sbjct: 768 TLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRATVAE 816
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 123/276 (44%), Gaps = 3/276 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N +H ++M+ S + I+ F + G+ + +F R+ P+ H
Sbjct: 533 NMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMM--RRSGCIPT-VH 589
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ L L + + + ++ +M G+ D Y +++ +A++ + A E F +
Sbjct: 590 TFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKL 649
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ D+ + L+ + G ++ L V M + + + ++++G+++R
Sbjct: 650 RNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDV 709
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
W A + +Q+ +G P TY S INA C+ G +A K EM+ G V Y+++
Sbjct: 710 WEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTL 769
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ + A+R +MK G +P+ +Y+ LM
Sbjct: 770 IHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLM 805
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 132/306 (43%), Gaps = 38/306 (12%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ GI Y +M + IG+ EK +F ++ PS Y L +
Sbjct: 403 EMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRL--KECGFAPSVIS-YGCLINMYT 459
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ + L+ + M+ GI + Y+ LI F + + A +F++ + G+ D+
Sbjct: 460 KMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVV 519
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
++ ++ + G +++ + +V+ M+ + I++GF++ A+++++ +
Sbjct: 520 LYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMM 579
Query: 192 ISQGCI-----------------------------------PGQVTYASIINAYCRIGLY 216
GCI P + TY +I+N Y +G
Sbjct: 580 RRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDT 639
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
KA + F +++ +G + V Y +++ K+GR++ A+ + +M + N ++YN L
Sbjct: 640 GKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNIL 699
Query: 277 MDMHGR 282
+D R
Sbjct: 700 IDGWAR 705
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F +V Y G + + + ESM+ + S + +++ ++ R A+ ++
Sbjct: 305 FGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMK 364
Query: 193 SQGCIPGQVTYASIINAYCRIG------LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+G VTY+ ++ + +IG +AE + EM+++G D + Y +M+ Y
Sbjct: 365 EEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYT 424
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
G + + ++K G P+V Y L++M+ +
Sbjct: 425 MIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTK 460
>gi|240255936|ref|NP_193372.6| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|374095491|sp|Q8GWE0.3|PP314_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16390, chloroplastic; AltName: Full=Chloroplastic
RNA-binding protein P67; Flags: Precursor
gi|332658341|gb|AEE83741.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 702
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 151/348 (43%), Gaps = 23/348 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E MK + V+ Y M+ F K D EK LF E R + ++T I C
Sbjct: 167 ETMKPSREVI---LYNVTMKVFRKSKDLEKSEKLFDEMLERGIK-PDNATFTTIISCAR- 221
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G +++F M G D A++I ++ V +A L+ A + D
Sbjct: 222 -QNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA 280
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +Y G + L + E MK + + I +++ + + W A +Y+
Sbjct: 281 VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKD 340
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
LI+ G P TYA+++ AY R A ++ EM++KG V+ Y+++++M
Sbjct: 341 LITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRY 400
Query: 251 IRDAMRLVAKMKP-KGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YT 293
+ +A + MK + C+P+ W ++SL+ ++ + + + E T
Sbjct: 401 VDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLT 460
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+VI Y A++ D V+ +++ G D G ++ V ++ E
Sbjct: 461 SVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEE 508
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 6/266 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM+ GI Y +++ K + + LF E LTP Y +L D+L
Sbjct: 518 KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQN--GLTPDE-QAYNVLTDALC 574
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
KSGRA E F + KG++ Y SL+ F+ A L ++ +G DL
Sbjct: 575 KSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLY 631
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ ++ + + L +++ M + + + +I++ K + A ++ ++
Sbjct: 632 TYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM 691
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
IS G P TY I++YC+IG +AE + EM++ G VV Y+ + G G I
Sbjct: 692 ISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYI 751
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
A + +M CEPN W Y L+
Sbjct: 752 DRAFSTLKRMVDASCEPNCWTYWLLL 777
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 128/330 (38%), Gaps = 23/330 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G L+ Y +++ K G L E R + PS Y + D K
Sbjct: 275 MVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLR--GVVPS-VWTYNAMIDGYCK 331
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
SGR + L M++ G D Y SLI ++ AEEL A +G +
Sbjct: 332 SGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVIT 390
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F L+ Y + ++ L V +M ++ + V++N K+ A + ++
Sbjct: 391 FTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMF 450
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+ G P VTY SII+ YC++G+ A +VF M+ +G Y S++ + ++
Sbjct: 451 ANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLH 510
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFY 312
AM L+ KM+ G P V YTT+I EFD + +
Sbjct: 511 KAMALITKMQEDGITPGVI-------------------TYTTLIQGQCKKHEFDNAFRLF 551
Query: 313 NEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
NG D ++ K + EE
Sbjct: 552 EMMEQNGLTPDEQAYNVLTDALCKSGRAEE 581
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 15/277 (5%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
K + + ++G+L D Y ++I ++ + +A F E GM D L+L Y
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ K ++ M ++ +++ G + R A+ + ++ GC
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNL 284
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
TY +I C+ G A + EM +G V Y++M+ Y K+GR++DA+ + A
Sbjct: 285 HTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344
Query: 261 MKPKGCEPNVWIYNSLMD--MHGRAKNLRQLEK-------------YTTVISAYNMAREF 305
M+ GC P+ W YNSL+ G+ +L +T +I+ Y A
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERI 404
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
D ++ + + +D G+++ V K +++E
Sbjct: 405 DDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKE 441
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 130/307 (42%), Gaps = 24/307 (7%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
KLDL Y +L + L K R E + +M G+ + Y S+I + + V
Sbjct: 420 KLDL-----QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMV 474
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A E+FK E +G + + L+ I++ + K + ++ M+ + +
Sbjct: 475 GAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTL 534
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ G K+ + A +++E + G P + Y + +A C+ G +AE+ + + +KG
Sbjct: 535 IQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGV 591
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ--- 288
V Y+S+V + K G A L+ KM +GC+ +++ Y+ L+ + K L +
Sbjct: 592 VLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALS 651
Query: 289 -------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+ YT +IS + D +NE +G + + +
Sbjct: 652 ILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYC 711
Query: 336 KLSQIEE 342
K+ +IEE
Sbjct: 712 KIGRIEE 718
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 114/286 (39%), Gaps = 23/286 (8%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
Y + G+VL Y +++ F K G+++ A L + E K DL + Y +L
Sbjct: 583 YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL-----YTYSVLL 637
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+L K + E L M G+ + Y +I + A+ LF E G
Sbjct: 638 QALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHK 697
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + Y + G +E+ ++ M+ + + +NG A
Sbjct: 698 PSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFST 757
Query: 188 YEQLISQGCIPGQVTY---------ASIINAYC--RIGLYSKAE-----KVFIEMQQKGF 231
++++ C P TY S+INA+ G+++ E ++ M + G
Sbjct: 758 LKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGL 817
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ VV YSS++A + K R+ +A L+ M K PN IY L+
Sbjct: 818 NPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 863
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 118/309 (38%), Gaps = 45/309 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILCD 68
+M + G+ + Y I++ + K+G +F +E E + + +Y ++ D
Sbjct: 447 NEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQD 506
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ + + M+E GI Y +LI E A LF+ E+ G+
Sbjct: 507 K-----KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTP 561
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + + L + G E E + + ++ +V+GFSK A +
Sbjct: 562 DEQAYNVLTDALCKSGRAE---EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLI 618
Query: 189 EQLISQGCIPGQVTYASIINAYCRI----------------------------------- 213
E+++++GC TY+ ++ A C+
Sbjct: 619 EKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKE 678
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G + A+ +F EM G Y+ ++ Y K GRI +A L+ +M+ G P+V Y
Sbjct: 679 GKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTY 738
Query: 274 NSLMDMHGR 282
N ++ G
Sbjct: 739 NIFINGCGH 747
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 97/255 (38%), Gaps = 25/255 (9%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++M +G+ + Y I+ K G + +LF E S PS+T Y +
Sbjct: 650 LSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISS--GHKPSAT-TYTVF 706
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
S K GR E +M+ G+ D Y I + + A K +
Sbjct: 707 ISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASC 766
Query: 127 LRD-------LEVFLKLVLM------------YIEEGMVEKTLEVVESMKNAELNISDCI 167
+ L+ FLK+ L+ +IE MV +++E M LN +
Sbjct: 767 EPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMV---WQLLERMMKHGLNPTVVT 823
Query: 168 SCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
I+ GF K A + + ++ + P + Y +I C I L+ KA +M
Sbjct: 824 YSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMI 883
Query: 228 QKGFDKCVVAYSSMV 242
+ GF + +Y ++
Sbjct: 884 EFGFQPQLESYHYLI 898
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 134/276 (48%), Gaps = 7/276 (2%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLGKSGR 75
G + Y I++ F K G+ + A++ E CE ++P+ Y L + KS R
Sbjct: 604 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE---FGVSPNVV-TYTSLINGFCKSNR 659
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
LK +M+EKG+ D + Y++LI F +++ A++LF E E G+ + V+
Sbjct: 660 IDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNS 719
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
++ + + +E L + M N + +++G K A +Y +++S+G
Sbjct: 720 MISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKG 779
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
+P +T+ ++N C G A K+ EM +K V+ Y++++A Y + G +++A
Sbjct: 780 IVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAF 839
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
L +M +G P+ Y+ L++ G+ K R L +
Sbjct: 840 TLHDEMLDRGLVPDDVTYDILIN--GKFKGDRSLSR 873
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 4/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +MK GI ++ + K E+ + LF E +D ++ Y I+
Sbjct: 423 YTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA----VDCGVANIFTYNIMMSW 478
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ E +M +G++ + Y +I + +A +F + + + +
Sbjct: 479 LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPN 538
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ ++G EK L++ + M + + +D I+NG K A +
Sbjct: 539 VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLK 598
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ +G IP +TY SI++ + + G A V+ EM + G VV Y+S++ + K+
Sbjct: 599 NFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 658
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
RI A++ +M+ KG E +V Y++L+D
Sbjct: 659 RIDLALKTRDEMREKGLELDVTAYSALID 687
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ +K GDSEK LF + S L++ P+ + + + L K G+ E +
Sbjct: 542 YSILIDGNFKKGDSEKALDLFDQMLS--LNIAPTD-FTFNTIINGLCKVGQMSEARDKLK 598
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+ E+G + Y S++ F + A +++E E G+ ++ + L+ + +
Sbjct: 599 NFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 658
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ L+ + M+ L + +++GF KRR +A ++ +L+ G P ++ Y
Sbjct: 659 RIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYN 718
Query: 205 SIINAY----------------------CRIGLYSK-------------AEKVFIEMQQK 229
S+I+ + C +G Y+ A +++EM K
Sbjct: 719 SMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSK 778
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G ++ + +V G++ +A +++ +M K P+V IYN+L+ + R NL++
Sbjct: 779 GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKE 837
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 113/249 (45%), Gaps = 34/249 (13%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K GR E ++FR+ KE+G+ D Y+ +I + + EL +E +E+G +
Sbjct: 272 KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 331
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F +++ + +G + + L + E M N ++ ++ ++ G+ + +A+ ++ ++
Sbjct: 332 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 391
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--------------------- 230
G P +VTY+ +I C G KA +++ +M+ G
Sbjct: 392 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 451
Query: 231 ------FDK---CVVA----YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
FD+ C VA Y+ M++ K G++ +A L+ M +G PNV YN ++
Sbjct: 452 EEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMI 511
Query: 278 DMHGRAKNL 286
H R N+
Sbjct: 512 LGHCRKGNM 520
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 1/224 (0%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D+ P +M IL +L + E+ + M +GI D ++ + V+
Sbjct: 220 DVIPWVPYM-NILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEE 278
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
AEE F+E +E+G+ D + ++ ++ LE++E MK S+ ++
Sbjct: 279 AEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIV 338
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+ A+++ E++I+ G V S++ YC G A +F ++ + G
Sbjct: 339 ACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFP 398
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V YS ++ +G I A L +MK G P+V+ NSL+
Sbjct: 399 NKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL 442
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
N ++ L +Y+KM + I D G Y +++ K G + L++E S+ + P
Sbjct: 728 NNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKG--IVPDII 785
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ +L + L G+ K +M K + +Y +LI + +K A L E
Sbjct: 786 -TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDE 844
Query: 121 AEEKGMLRD 129
++G++ D
Sbjct: 845 MLDRGLVPD 853
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M G D + SLI + +V VA +LF + +G +D+ + L+ E G
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+++ +E+ M ++++ +V G + + ++ G P YA+
Sbjct: 61 IDEAVELFGEMDQPDMHMY----AALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+++ CR +AE++ EM +KG CVV ++++ Y K GR+ DA+R++ MK +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 266 CEPNVWIYNSLM 277
C+PNVW YN+L+
Sbjct: 177 CKPNVWTYNALV 188
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 144/361 (39%), Gaps = 58/361 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++KM G D Y ++E + G ++ LF E + + HMY L
Sbjct: 33 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDM-------HMYAALVKG 85
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM--- 126
L + R E L R MKE G YA+++ + K AEE+ +E EKG+
Sbjct: 86 LCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPC 145
Query: 127 --------------------LRDLEV------------FLKLVLMYIEEGMVEKTLEVVE 154
LR LE+ + LV + EG V K + ++
Sbjct: 146 VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLN 205
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M+ +N +++ G +A ++ + G I Q TY ++INA C+ G
Sbjct: 206 KMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDG 265
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A +F ++ +G V ++S++ K+G+ A + + KM GC P+ + Y+
Sbjct: 266 RTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYS 325
Query: 275 SLMD----MHGRAKNL----RQLEK--------YTTVISAYNMAREFDMCVKFYNEFRMN 318
S ++ M G + L L+K YT VI R + + + + E +
Sbjct: 326 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 385
Query: 319 G 319
G
Sbjct: 386 G 386
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 139/336 (41%), Gaps = 15/336 (4%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM++ G+ D+ Y ++ G E L E L + + Y L ++L
Sbjct: 206 KMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL---IADQYTYNALINALC 262
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K GR + F ++ +GI + + SLI + +A + ++ G D
Sbjct: 263 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTY 322
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ + + ++ L + M ++ S ++++ K R Y + + ++
Sbjct: 323 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 382
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+S GC P VTY + + AYC G ++AE V +EM + G +AY++++ + G+
Sbjct: 383 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 442
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTT-----VISAYNMAREFD 306
A+ ++ +M PN + Y L+ R + + + T I ++ FD
Sbjct: 443 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 502
Query: 307 MCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ K NEF N G + G FS+ + EE
Sbjct: 503 VMKK--NEFLPNSGTYSSILEG-----FSEDGRTEE 531
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 115/306 (37%), Gaps = 40/306 (13%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L G+ + + M+ G+ D Y LI ++ A L + E
Sbjct: 184 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 243
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G++ D + L+ ++G ++ + +S++ + + ++NG K
Sbjct: 244 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKAD 303
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRI-----GL---------------------- 215
A K E+++S GC P TY+S I C++ GL
Sbjct: 304 IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 363
Query: 216 --------YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
Y + + EM G + VV Y++ + Y GR+ +A ++ +M G
Sbjct: 364 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 423
Query: 268 PNVWIYNSLMDMHGRAKNLRQ----LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
+ YN+LMD H L++ T+V S N F + ++ R+ V+
Sbjct: 424 VDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF-ILLRHLVRMRLVEDVLP 482
Query: 324 RAMAGI 329
AG+
Sbjct: 483 LTPAGV 488
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 132/346 (38%), Gaps = 57/346 (16%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S M+ G++ D Y ++ A K G +++ +LF E+R + P++ +
Sbjct: 233 ESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGI--KPNAV-TF 289
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI------------CSF------ 105
L + L KSG+A KF M G D Y+S I SF
Sbjct: 290 NSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 349
Query: 106 -----ASIAEVKVAEELFKEAE------------EKGMLRDLEVFLKLVLMYIEEGMVEK 148
+++ V +L KE G D+ + + Y EG + +
Sbjct: 350 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 409
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
V+ M + + +++G + AV + +Q+ S +P Q TY ++
Sbjct: 410 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 469
Query: 209 AYCRI------------GLYSKAE-----KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
R+ G++ E +F M++ F YSS++ + + GR
Sbjct: 470 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 529
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+A LV+ MK N IY +L+ ++K R L+ + V S
Sbjct: 530 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSK--RYLDAWVLVCS 573
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 127/269 (47%), Gaps = 3/269 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++ ++ G V + Y I+ F K G A++ + ++ + P + Y D
Sbjct: 515 KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI---PPNIVTYTSFIDGY 571
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+ LK D++ KG+ D + Y SLI F + A ++ + G+L ++
Sbjct: 572 CKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNI 631
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
V+ + Y M+E+ L + E M +++ +++GFSK A+K+Y +
Sbjct: 632 SVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSE 691
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++++G IP +T+ ++ + CR G A K+ EM + V+ Y+ ++ Y + G+
Sbjct: 692 MVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGK 751
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+++A RL +M + P+ Y+ L+ M
Sbjct: 752 LQEAFRLHDEMLERKIMPDDTTYDILVGM 780
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 129/316 (40%), Gaps = 57/316 (18%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL L + + E L + M E G+ Y SL+ + + A +L+ E
Sbjct: 389 YNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMP 448
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-------CV----- 170
KG ++ + L+ +I + +K ++ MK ++ +D CV
Sbjct: 449 GKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVC 508
Query: 171 -----------------------IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
I+NGF K +A VY+Q+ ++G P VTY S I
Sbjct: 509 EVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFI 568
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
+ YC+ A K+ +++ KG + AY+S++ + + G + A++++ M G
Sbjct: 569 DGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLL 628
Query: 268 PNVWIYNSLMDMHGRAKNLRQLEK-------------------YTTVISAYNMAREFDMC 308
PN+ +YNS + + KNL+ +E+ YTT+I ++
Sbjct: 629 PNISVYNSFITGY---KNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFA 685
Query: 309 VKFYNEFRMNGGVIDR 324
+K Y+E G + D
Sbjct: 686 LKLYSEMVAKGNIPDH 701
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 125/277 (45%), Gaps = 3/277 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK G+ + Y ++ +G +V + E+ P++ Y + +
Sbjct: 481 EMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF--VPTAM-TYNSIINGFI 537
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G ++ M KGI + Y S I + + +A ++ + KG+ D+
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIA 597
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + +EG + L+V+ M L + + + G+ + A+++YE++
Sbjct: 598 AYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKM 657
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
I +G TY ++I+ + + G + A K++ EM KG + ++++ + G I
Sbjct: 658 IKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDI 717
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
DA +L+ +M PNV +YN L++ + R L++
Sbjct: 718 DDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQE 754
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 1/218 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ + D L K GR E L ++ G + +L+ + EV+ A ++F+E
Sbjct: 250 FNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETL 309
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G++ + L+ EEGM EK E+ M++ L S +++ G + +
Sbjct: 310 RDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWK 369
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AV +++++ G IP TY +I+ C+ +A ++ +M + G +V Y S++
Sbjct: 370 DAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLL 428
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
Y G + +A++L +M KG PNV Y +LM H
Sbjct: 429 LCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 116/273 (42%), Gaps = 6/273 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC-ESRKLDLTPSSTHMYKI 65
L +E+ G+V Y ++ + G EK L C + R L PS T+ + +
Sbjct: 302 LDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYEL---CRQMRDHGLLPS-TNEFNM 357
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+ L + + F++M + GI D Y LI +++ A L+++ E G
Sbjct: 358 VIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETG 416
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ + + L+L Y G +++ +++ M + ++ G + A+ A
Sbjct: 417 VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAY 476
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ ++ G TY ++IN C +G + ++ + +GF + Y+S++ +
Sbjct: 477 ALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGF 536
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G + A + +M KG PN+ Y S +D
Sbjct: 537 IKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFID 569
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 104/232 (44%), Gaps = 1/232 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P M+ ++ + K G + ++ F +M I D V + I S + + A
Sbjct: 174 PLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALL 233
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ ++ ++ G + F +V + ++ G +E+ L + + + +S ++ +++G+
Sbjct: 234 VLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYC 293
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+R A+ ++E+ + G +P VTY +I G+ KA ++ +M+ G
Sbjct: 294 LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
++ ++ +DA+ L +M G P+ + YN L+ + + +R+
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIRE 404
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 93/232 (40%), Gaps = 11/232 (4%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M+ +G+ D L+ A A A L E KG D +F ++ +EGM
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+ + + + M +E+ + V + K R A+ V ++ G +P T+ S
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+++ + G +A + E+ G VV ++++ Y +R A+ + + G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312
Query: 266 CEPNVWIYNSLM------DMHGRAKNL-RQLEKYTTVISAYNMAREFDMCVK 310
P Y L+ M +A L RQ+ + + S EF+M +K
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPS----TNEFNMVIK 360
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 142/332 (42%), Gaps = 23/332 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD-- 68
++M G+ D Y +++A+ + G E L E E+ + PSS +IL
Sbjct: 330 DEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAGFR 387
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G +AF +L R+M G+ D Y +I +F + A + F E+G+
Sbjct: 388 DRGDWQKAFAVL---REMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEP 444
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ + + G ++ +E+ E M+ + +++N ++ + +
Sbjct: 445 DVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETML 504
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ QG +P +TY ++++ Y R G + +A + M+ G Y ++V Y +
Sbjct: 505 SEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQR 564
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG---------------RAKNLR-QLEKY 292
G A+ +V M+ G E + + NSLM+ G + +LR + Y
Sbjct: 565 GLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITY 624
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
TT++ A +FD Y E +G DR
Sbjct: 625 TTLMKALIRIEQFDKVPVIYEEMITSGCAPDR 656
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 140/333 (42%), Gaps = 20/333 (6%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D+ + ++ AF + + AAL L ++ + LTP S + L +LG +GR E
Sbjct: 234 DAPLFSDLISAFARAALPD--AALDLLASAQAIGLTPRSNAV-TALISALGGAGRVAEAE 290
Query: 81 KFFRDMKEKG-ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
F + G I Y +L+ + I +K AE++ E + G+ D + LV
Sbjct: 291 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDA 350
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
Y G E +++ M+ + S + I+ GF R + A V ++ + G P
Sbjct: 351 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPD 410
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+ Y +I+ + + A F M+++G + VV +++++ + K GR AM L
Sbjct: 411 RHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFE 470
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE----------------KYTTVISAYNMAR 303
+M+ C P YN ++++ G + +E YTT++ Y +
Sbjct: 471 EMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSG 530
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
F ++ + +G M +V +++
Sbjct: 531 RFKEAIECIEVMKADGLKPSPTMYHALVNAYAQ 563
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 94/235 (40%), Gaps = 38/235 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ GI D + +++A K G ++ LF E P T Y I+ +
Sbjct: 434 FNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESN---CPPGTTTYNIMINL 490
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ R + +MKE+G++ + Y +L+ + K A E + + G+
Sbjct: 491 LGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPS 550
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR---------- 179
++ LV Y + G+ + L VV++M+ L S + ++N F + R
Sbjct: 551 PTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQ 610
Query: 180 ------------AYWAAVK-------------VYEQLISQGCIPGQVTYASIINA 209
Y +K +YE++I+ GC P + A + +A
Sbjct: 611 FMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPDRKARAMLRSA 665
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 111/225 (49%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D +H+Y I+ L +GRA E + D KG + + +VY +LI + S ++++
Sbjct: 173 DGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLEL 232
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A ++FK + KG L ++ + +L+ + + G VE+ + + M A L + ++
Sbjct: 233 AIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQ 292
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G A ++ + + G P + T +I+A C+ G +A++ + QKG
Sbjct: 293 GQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKV 352
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y+SM+ K+G+ A L+ K+ +G P+ +Y+SL+D
Sbjct: 353 NQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLID 397
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 3/273 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M G DS Y ++ G + + AL + + P+ +Y L D
Sbjct: 167 FAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGK--GFVPN-VAVYNALIDG 223
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+G + F+ M+ KG L + Y LIC F +V+ A L+ E G+ +
Sbjct: 224 YCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPN 283
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ EG +E ++ SM+ L ++ V+++ K A +
Sbjct: 284 VVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLG 343
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L+ +G QV Y S+I+A C+ G + A + ++ +GF YSS++ +
Sbjct: 344 SLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCREN 403
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
++ +A+ L+ M G + N + L+D H R
Sbjct: 404 KLLEAISLLNDMIESGVQANAVPFTILIDKHLR 436
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 125/334 (37%), Gaps = 54/334 (16%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ + AG+ DS Y + + + G LFL R TP + Y L
Sbjct: 96 HLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFT---YAALLQ 152
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L +G E + F M G D VY+ ++ A L +A KG +
Sbjct: 153 GLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVP 212
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ V+ L+ Y G +E +++ + M+
Sbjct: 213 NVAVYNALIDGYCSTGDLELAIDIFKGMQ------------------------------- 241
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
S+GC+P TY +I +C+ G +A ++ M + G VV Y++++
Sbjct: 242 ----SKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSE 297
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQ-----LEK--------Y 292
G + A RL+ M+ G PN W L+D HGR + +Q ++K Y
Sbjct: 298 GHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIY 357
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
T++I A + +FD + G V D M
Sbjct: 358 TSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHM 391
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 87/217 (40%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y L ++ +G + + G+ D Y S + + A LF
Sbjct: 75 HTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLL 134
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
++G R + L+ GMV + + V M + ++V+G
Sbjct: 135 MPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGR 194
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AV + + +G +P Y ++I+ YC G A +F MQ KG V Y+
Sbjct: 195 AGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQ 254
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ + K+G++ AM L ++M G PNV Y +L+
Sbjct: 255 LICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLI 291
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 115/270 (42%), Gaps = 3/270 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M AG+ + Y +++ G E L E+ L P+ +L D+
Sbjct: 272 YSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEA--CGLAPNEWTCL-VLIDA 328
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K GR E +F + +KGI + +Y S+I + + A L ++ +G + D
Sbjct: 329 LCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPD 388
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ L+ E + + + ++ M + + + ++++ + + + +
Sbjct: 389 AHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISD 448
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + G P VTY I +YC+ G AE + I+M G + Y++++ Y G
Sbjct: 449 RMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLG 508
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ A + M GC+PN Y L+ +
Sbjct: 509 LVSQAFSSLKNMIDNGCKPNDESYTVLLGL 538
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 27/210 (12%)
Query: 106 ASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD 165
A + ++ L GML D+E + M + L ++ NA + D
Sbjct: 38 APVPPIRCLNTLLMALARHGMLSDMES--------LAARMPVRNLHTYTTLINAYCHAGD 89
Query: 166 CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
AA + L+ G P Y S + YCR GL++ A ++F+
Sbjct: 90 ---------------LPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLL 134
Query: 226 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
M Q+G + Y++++ G +R+AM + A M P GC P+ +Y S+M +HG
Sbjct: 135 MPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVY-SIM-VHGLCGA 192
Query: 286 LRQLEKYTTVISAYNMAREFDMCVKFYNEF 315
R E + A M + F V YN
Sbjct: 193 GRAGEAVALLTDA--MGKGFVPNVAVYNAL 220
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 118/296 (39%), Gaps = 38/296 (12%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G V + Y +++ + GD E +F +S+ P+ +++C KSG+
Sbjct: 209 GFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSK--GCLPNVRTYTQLIC-GFCKSGKV 265
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
+ + M E G+ + Y +LI S ++ A L E G+ + L L
Sbjct: 266 ERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVL 325
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ + G +E+ + + S+ + ++ I +++ K + A + +++I++G
Sbjct: 326 IDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGF 385
Query: 197 IPGQVTYASIINAYCR----------------IGLYSKAEKVFI---------------- 224
+P Y+S+I+ CR G+ + A I
Sbjct: 386 VPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKM 445
Query: 225 ---EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
M G VV Y+ + Y + GR+ DA ++ +M G PN+ YN+L+
Sbjct: 446 ISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLI 501
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 123/281 (43%), Gaps = 17/281 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTHMYKILCD 68
++M +AG+ D Y + ++ + G E ++ ++ + +LT +T +
Sbjct: 448 DRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYA-- 505
Query: 69 SLGKSGRAFEILKFFRDMKEK----------GILEDPSVYASLIC---SFASIAEVKVAE 115
+LG +AF LK D K G+L + Y L+ S I ++KV E
Sbjct: 506 NLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLE 565
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
EL +E + V+ + + +E+ + M++A L S+ + ++
Sbjct: 566 ELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECC 625
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+ + A++ + ++ + +P +Y II A C G + A+ +F ++ K +++
Sbjct: 626 YRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDE 685
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+A+ ++ + G D RL++ M+ + C P IY+ L
Sbjct: 686 IAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 76/192 (39%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y + D+L KSG+ + + +G + D +Y+SLI ++ A L +
Sbjct: 356 IYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDM 415
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G+ + F L+ ++ E + + + M A + V + + +
Sbjct: 416 IESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRM 475
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + Q+I G P TY ++I Y +GL S+A M G +Y+ +
Sbjct: 476 EDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVL 535
Query: 242 VAMYGKTGRIRD 253
+ + K D
Sbjct: 536 LGLLLKKNSYHD 547
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 41/330 (12%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ LH+++K+ + G +D Y ++ KIG++ L E R T + MY
Sbjct: 97 KKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRS---TRPNVVMY 153
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE------------- 110
+ D L K E + +M +GI + Y++LI F +
Sbjct: 154 NTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMIL 213
Query: 111 ----------------------VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
VK A+ L ++G+ ++ + L+ Y G V+
Sbjct: 214 KNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQN 273
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
++ +M +N + ++++ K + A+ + +++ + +P VTY+S+I+
Sbjct: 274 AKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLID 333
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+C++G + A + EM +G VV Y+S++ K + A L KMK +G +P
Sbjct: 334 GFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 393
Query: 269 NVWIYNSLMD---MHGRAKNLRQLEKYTTV 295
N + Y +L+D GR KN ++L ++ V
Sbjct: 394 NKYTYTALIDGLCKGGRHKNAQKLFQHLLV 423
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M + GI + Y ++ F G + L E + ++ + + Y IL D+
Sbjct: 173 YSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNIN---PNVYTYTILMDA 229
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ E M ++G+ + Y +L+ + I EV+ A+++F +KG+ +
Sbjct: 230 LCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPN 289
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ + V++ + ++ + + + + +++GF K +A+ + +
Sbjct: 290 VYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLK 349
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G VTY S+++A C+ KA +F++M+++G Y++++ K G
Sbjct: 350 EMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGG 409
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R ++A +L + KGC NVW YN ++
Sbjct: 410 RHKNAQKLFQHLLVKGCRINVWTYNVMI 437
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 109/261 (41%), Gaps = 38/261 (14%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G+ + Y +M+ + IG+ + +F + ++ + + Y I+ D L K
Sbjct: 246 MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVN---PNVYSYNIMIDRLCK 302
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
S R E + R++ K ++ + Y+SLI F + + A +L KE +G D+
Sbjct: 303 SKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVT 362
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + K + A ++ ++
Sbjct: 363 YTSLL-----------------------------------DALCKNQNLDKATALFMKMK 387
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P + TY ++I+ C+ G + A+K+F + KG V Y+ M++ K G +
Sbjct: 388 ERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLD 447
Query: 253 DAMRLVAKMKPKGCEPNVWIY 273
+A+ + +KM+ GC P+ +
Sbjct: 448 EALAMKSKMEENGCIPDAVTF 468
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 39/241 (16%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
KL P++ + L L G + L F + +G D YA+L+ I E
Sbjct: 73 KLGYQPNTITL-NTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGET 131
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+ A +L + E++ + V+MY I
Sbjct: 132 RSALKLLRMIEDRSTRPN-------VVMY----------------------------NTI 156
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++G K + A +Y ++ ++G P +TY+++I +C G +A + EM K
Sbjct: 157 IDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNI 216
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQ 288
+ V Y+ ++ K G++++A L+A M +G +PNV YN+LMD + G +N +Q
Sbjct: 217 NPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQ 276
Query: 289 L 289
+
Sbjct: 277 M 277
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 1/223 (0%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP KI+ SL K + F+ M+ KGI D LI F + ++ +
Sbjct: 7 TPPIMEFNKIV-GSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSF 65
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ + + G + L+ +G V+K+L + + + ++NG
Sbjct: 66 TVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGL 125
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K +A+K+ + + P V Y +II+ C+ L ++A ++ EM +G V
Sbjct: 126 CKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNV 185
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ YS+++ + G++ +A L+ +M K PNV+ Y LMD
Sbjct: 186 ITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMD 228
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 153/346 (44%), Gaps = 23/346 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ MK G V D Y +++ K GD + ++ E + +TP+ Y L
Sbjct: 306 FDGMKKCGFVPDVHSYSILVDGLCKQGDV--LTGYYMLVEMARNGITPNLVS-YSSLLHG 362
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++GR + F+ +K++G D VY+ ++ ++++ +L+ + + D
Sbjct: 363 LCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPD 422
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCVIVNGFSKRRAYWAAVKV 187
+ L+ Y +++ LEV E M + + N+ C ++V+GFS A
Sbjct: 423 AYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCT--ILVHGFSNEGLIGEAFLF 480
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++ G +P TY II+ C++ + +F +M ++G+ V YS ++ + K
Sbjct: 481 LDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVK 540
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
+++A RL KM +G +PN++ Y SL++ L ++
Sbjct: 541 ALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRIL 600
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
YT++I+ Y ++ + E G D + ++G FSK+
Sbjct: 601 YTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKV 646
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 3/222 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ +K++ G+V Y I+ K+ + +F + R P + +Y I+ D
Sbjct: 480 FLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGY--VPDTV-LYSIIID 536
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K+ E + + M ++G + Y SLI ++ LFK +G+
Sbjct: 537 GFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAP 596
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D ++ L+ Y + ++ LE+ M+ L+ + ++ GFSK A A
Sbjct: 597 DRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFM 656
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
E+++++G P VTY +I Y +IG KA ++ M Q G
Sbjct: 657 EEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAG 698
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 103/228 (45%), Gaps = 2/228 (0%)
Query: 42 AALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASL 101
A LFL+ + R+ + PS Y+++ L K + ++ F DM ++G + D +Y+ +
Sbjct: 477 AFLFLD-KVRQFGVVPSLC-TYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSII 534
Query: 102 ICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
I F +++ A L+ + ++G ++ + L+ + + + + + + M L
Sbjct: 535 IDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGL 594
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
+ ++ + KR AA++++ ++ ++G Y +I + ++ A+
Sbjct: 595 APDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQL 654
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
EM KG VV Y+ ++ Y K G + AM + M G P+
Sbjct: 655 FMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 94/228 (41%), Gaps = 2/228 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + + + G+ + ++ F MK+ G + D Y+ L+ +V
Sbjct: 280 PCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYY 339
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ E G+ +L + L+ G VE E+ + +K+ + ++++G
Sbjct: 340 MLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCC 399
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ ++ ++ +P Y+S+I AYCR +A +VF M G VV
Sbjct: 400 QHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVV 459
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+ +V + G I +A + K++ G P++ Y + +HG K
Sbjct: 460 TCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVI--IHGLCK 505
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 89 KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
+G+ + + YA+ + +VK A + ++G + F ++ + +G V K
Sbjct: 242 EGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHK 301
Query: 149 TLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+EV + MK + D S ++V+G K+ + ++ G P V+Y+S++
Sbjct: 302 AIEVFDGMKKCGF-VPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLL 360
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
+ CR G A ++F ++ +GF + YS ++ + + L M
Sbjct: 361 HGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFV 420
Query: 268 PNVWIYNSLMDMHGRAKNLRQ-LEKYTTVIS 297
P+ + Y+SL+ + R + L++ LE + ++S
Sbjct: 421 PDAYNYSSLIYAYCRHRQLKEALEVFELMVS 451
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
L+ FR+M+ +G+ D VY LI F+ + + A+ +E KG+ + + L++
Sbjct: 618 LEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVG 677
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
Y + G +K + + SM A + +SC++
Sbjct: 678 YFKIGDEKKAMAMYNSMLQAGIAPDAKLSCIL 709
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 3/279 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MKS+G+ D Y ++ + E+ A +F E KL + L D GK
Sbjct: 279 MKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVF---EEMKLSGFSPDKVTFNTLLDVYGK 335
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
S R E ++ ++M+ G Y SLI ++A ++ A EL + EKG+ D+
Sbjct: 336 SRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFT 395
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + + GM E + + M+ A + C ++ R + +KV+E++
Sbjct: 396 YTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIE 455
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
C P VT+ +++ + + G+ S+ VF EM++ GF ++++++ Y + G +
Sbjct: 456 ICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQ 515
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
AM + +M G P++ YN+++ R Q EK
Sbjct: 516 QAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEK 554
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 112/214 (52%), Gaps = 1/214 (0%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
++ LGK G+ ++++ G D Y SLI ++AS + A +FK+ EE+
Sbjct: 187 VIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEE 246
Query: 125 GMLRDLEVFLKLVLMYIEEGMV-EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G L + ++ +Y + GM K +V MK++ + D +++ + Y
Sbjct: 247 GCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEE 306
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +V+E++ G P +VT+ ++++ Y + +A +V EM+ GF +V Y+S+++
Sbjct: 307 AAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLIS 366
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y + G +R+AM L +M KG +P+V+ Y +L+
Sbjct: 367 AYARDGLLREAMELKDQMVEKGIKPDVFTYTTLL 400
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 148/332 (44%), Gaps = 53/332 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYKILC 67
+++MK AG V + + ++ A+ + G ++ A++ R L+ +TP + Y +
Sbjct: 486 FKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVY----KRMLEAGVTPDLSS-YNAVL 540
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVK----VAEEL------ 117
+L + G + K F +MK+ + Y SL+ ++A+ E++ +AEE+
Sbjct: 541 AALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTE 600
Query: 118 -------------------------FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
F+E ++KG DL ++ +Y MV K E+
Sbjct: 601 PVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGS-PDLSTLNAMIAIYGRRQMVAKANEI 659
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ M + + S ++ S+ + + +V ++++++G P ++Y ++I AYCR
Sbjct: 660 LNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCR 719
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
G A ++F M+ G V+ Y++ VA Y DA+ +V M GC+ N
Sbjct: 720 NGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNT 779
Query: 273 YNSLMD---MHGR-------AKNLRQLEKYTT 294
YNS++D H R +L QL+ + T
Sbjct: 780 YNSIVDGYCKHSRRADAIMFVSSLNQLDPHVT 811
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 52/253 (20%)
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E E+ + + V ++ M +EG V ++ +++ ++ ++ ++
Sbjct: 171 REREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASN 230
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAY---------------------------- 210
Y AV V++++ +GC P +TY I+N Y
Sbjct: 231 GRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYT 290
Query: 211 -------CRIG-LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
CR G LY +A +VF EM+ GF V +++++ +YGK+ R ++AM ++ +M+
Sbjct: 291 YNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEME 350
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQ--------LEK--------YTTVISAYNMAREFD 306
G P++ YNSL+ + R LR+ +EK YTT++S + A +
Sbjct: 351 FSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDE 410
Query: 307 MCVKFYNEFRMNG 319
++ + E R G
Sbjct: 411 PAMRIFGEMRAAG 423
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/288 (18%), Positives = 122/288 (42%), Gaps = 40/288 (13%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L G++G E+ F++MK G + + + +LI +++ + A ++K
Sbjct: 466 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRML 525
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK----R 178
E G+ DL + ++ G+ E++ +V MK+ ++ C +++ ++
Sbjct: 526 EAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIE 585
Query: 179 RAYWAAVKVY-------------------------------EQLISQGCIPGQVTYASII 207
R + A ++Y E+L +G P T ++I
Sbjct: 586 RMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGS-PDLSTLNAMI 644
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
Y R + +KA ++ M + GF + Y+S++ M+ ++ + ++ ++ KG +
Sbjct: 645 AIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLK 704
Query: 268 PNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEF 315
P++ YN+++ + R ++ + + + Y + + V YN F
Sbjct: 705 PDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPD----VITYNTF 748
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
A II + G S A + +++ GFD V AY+S++ Y GR RDA+ + KM+
Sbjct: 186 AVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEE 245
Query: 264 KGCEPNVWIYNSLMD---------------MHGRAKNLRQLEKYT--TVISAYNMAREFD 306
+GC+P + YN +++ +HG + + YT T+IS ++
Sbjct: 246 EGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYE 305
Query: 307 MCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ + E +++G D+ ++ V+ K + +E
Sbjct: 306 EAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKE 341
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 48/299 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MK +G D + +++ + K ++ + E E +PS Y L +
Sbjct: 311 FEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFS--GFSPSIV-TYNSLISA 367
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G E ++ M EKGI D Y +L+ F + A +F E G +
Sbjct: 368 YARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPN 427
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI------------------ 171
+ F L+ M+ G + ++V E E+ I +C ++
Sbjct: 428 ICTFNALIKMHGNRGRFAEMMKVFE-----EIEICNCAPDIVTWNTLLAVFGQNGMDSEV 482
Query: 172 ----------------------VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
++ +S+ ++ A+ VY++++ G P +Y +++ A
Sbjct: 483 SGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAA 542
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
R GL+ ++EKVF EM+ + Y S++ Y + I L ++ EP
Sbjct: 543 LARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEP 601
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 168/353 (47%), Gaps = 29/353 (8%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ K+K++GI D Y ++ + K ++ L E ++ L P + Y IL ++
Sbjct: 118 FSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLL--AEMKEAGLMPDTVS-YTILINA 174
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK-GMLR 128
+S + E + F +MK KGI D + +I + + V+ AEELF + G+ +
Sbjct: 175 YAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQ 234
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKN---AELNISDCISCVIVNGFSKRRAYWAAV 185
++ + ++ +Y E ++ + V M+N E N+ + + ++G + + A+
Sbjct: 235 NVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHE--KAM 292
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++ ++ +G P VTY+++I+ Y + G Y +A +F +++KGF+ + Y SM+ +Y
Sbjct: 293 RLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVY 352
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-------------- 291
+ G + A RL+ ++K +P++ ++ + + +A+ L + K
Sbjct: 353 ERAGLVAHAKRLLEELK----QPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKES 408
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y ++I + + + + R +G + D +++ + +L Q+E+
Sbjct: 409 VTYKSMIQLFMRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLED 461
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 124/305 (40%), Gaps = 53/305 (17%)
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M EK ++ D +++LI + ++ A +E E G+ DL +F L+ + +
Sbjct: 50 EMVEKDLVPDKFTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVK 109
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
K + +K + + I ++N + K + Y A + ++ G +P V+Y
Sbjct: 110 DYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYT 169
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+INAY Y +A++VF+EM+ KG V + M+ +YGK +RDA L M
Sbjct: 170 ILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKT 229
Query: 265 -------------------------------------GCEPNVWIYNSLMDMHG----RA 283
G EPNV YN+++ +HG
Sbjct: 230 LGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHE 289
Query: 284 KNLRQLEK------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
K +R + K Y+T+IS Y ++D + R G +D + M+
Sbjct: 290 KAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMI 349
Query: 332 GVFSK 336
V+ +
Sbjct: 350 VVYER 354
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 111/246 (45%), Gaps = 19/246 (7%)
Query: 95 PSVYA--SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
PS++A ++ + + ++AE L E EK ++ D F L+ Y +E +
Sbjct: 23 PSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDAMGW 82
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
++ M+ + I ++ K + Y A ++ +L + G P +V Y S+IN Y +
Sbjct: 83 LQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGK 142
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
Y +A+ + EM++ G V+Y+ ++ Y ++ + +A ++ +MK KG + +V
Sbjct: 143 AKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTT 202
Query: 273 YNSLMDMHGRAKNLRQLEK-----------------YTTVISAYNMAREFDMCVKFYNEF 315
N ++D++G+ + +R E+ Y T+I Y A +
Sbjct: 203 CNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYM 262
Query: 316 RMNGGV 321
+ GGV
Sbjct: 263 QNKGGV 268
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 106/240 (44%), Gaps = 32/240 (13%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
++ R M+++GI + Y++LI + + A LFK EKG D ++ ++++
Sbjct: 292 MRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVV 351
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA---YW-------------- 182
Y G+V ++E +K ++ D ++ A YW
Sbjct: 352 YERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTY 411
Query: 183 --------------AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
A+ V+E + G +P T ++ AY ++ AEK++++M++
Sbjct: 412 KSMIQLFMRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRE 471
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+G + M+ +YG +IR+A + A +K +G + + +Y +++ ++ RA L +
Sbjct: 472 RGCTLEKEVHFQMLKLYGDARKIREAEDMFAALKLEGLDGDE-LYLTMIRIYERASKLNE 530
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 80/199 (40%), Gaps = 51/199 (25%)
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G P Y ++ R + AE + +EM +K +S++++ YG+ R+ DA
Sbjct: 20 GYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDA 79
Query: 255 M-----------------------------------RLVAKMKPKGCEPNVWIYNSLMDM 279
M L +K+K G P+ IYNS++++
Sbjct: 80 MGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINL 139
Query: 280 HGRAKNLRQLE----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
+G+AK ++ + YT +I+AY ++++ + + E + G +D
Sbjct: 140 YGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLD 199
Query: 324 RAMAGIMVGVFSKLSQIEE 342
+M+ V+ KL + +
Sbjct: 200 VTTCNMMIDVYGKLEMVRD 218
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 125/275 (45%), Gaps = 43/275 (15%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM-YKILCDS 69
+K+ +LD Y I+ A+ + G EK LF R ++ PS T + Y ++ D
Sbjct: 206 DKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLF----ERMKEMGPSPTLVTYNVILDV 261
Query: 70 LGKSGRAF-EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
GK GR++ +IL +M+ KG+ D ++++ + A ++ A++ F E + G
Sbjct: 262 FGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCG--- 318
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
E G V NA L + F K Y A+ V
Sbjct: 319 ------------YEPGTV---------TYNALLQV-----------FGKAGVYTEALSVL 346
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM-QQKGFDKCVVAYSSMVAMYGK 247
+++ C VTY ++ AY R G +SK V IEM QKG + Y++++ YGK
Sbjct: 347 KEMEENNCPADSVTYNELVAAYARAG-FSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGK 405
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
G+ +A++L MK GC PN YN+++ M G+
Sbjct: 406 AGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGK 440
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 3/281 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M+S G+ D ++ A + G + F E +S + T Y L
Sbjct: 277 EEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYE---PGTVTYNALLQVF 333
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK+G E L ++M+E D Y L+ ++A K A + + +KG++ +
Sbjct: 334 GKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNA 393
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y + G ++ L++ SMK A + C +++ K+ +K+
Sbjct: 394 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCD 453
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ S GC P + T+ +I+ G+ +VF EM+ GF+ ++++++ YG+ G
Sbjct: 454 MKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 513
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
DA ++ +M G V YN+L++ R + R E
Sbjct: 514 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGEN 554
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 128/302 (42%), Gaps = 15/302 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M AG Y ++ A + GD + + +S+ T +S Y ++
Sbjct: 521 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETS---YSLMLQC 577
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G I + + E I + +L+ + + +E F ++ G D
Sbjct: 578 YAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPD 637
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ +F ++ ++ M ++ +++S+ LN +++ + +R W A ++ +
Sbjct: 638 MVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILK 697
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY---G 246
L P V+Y ++I +CR GL +A ++ EM ++G C+ Y++ V+ Y G
Sbjct: 698 TLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG 757
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
G I D + +AK C PN + ++D + RA KY+ + + + FD
Sbjct: 758 MYGEIEDVIECMAK---NDCRPNELTFKMVVDGYCRAG------KYSEAMDFVSKIKTFD 808
Query: 307 MC 308
C
Sbjct: 809 PC 810
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 136/307 (44%), Gaps = 19/307 (6%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE-DPSVYASLICSFASIAEVKV 113
LT + K L DS G RA + ++ G L+ D V L+ ++ V
Sbjct: 142 LTTDLVSLVKGLDDS-GHWERAVFLFEWLVLSSNSGALKLDHHVIEILVRILGRESQYSV 200
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A +L + + + D+ + ++ Y G EK + + E MK + + VI++
Sbjct: 201 AAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILD 260
Query: 174 GFSKRRAYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
F K W + V E++ S+G + T +++++A R GL +A+ F E++ G++
Sbjct: 261 VFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYE 320
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE-- 290
V Y++++ ++GK G +A+ ++ +M+ C + YN L+ + RA ++
Sbjct: 321 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVV 380
Query: 291 --------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
YTTVI AY A + D +K + + G V + ++ + K
Sbjct: 381 IEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGK 440
Query: 337 LSQIEEL 343
S+ E+
Sbjct: 441 KSRSNEM 447
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 136/340 (40%), Gaps = 54/340 (15%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M G++ ++ Y +++A+ K G ++ LF ++ P+ T Y + L
Sbjct: 382 EMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM--KEAGCVPN-TCTYNAVLSML 438
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK R+ E++K DMK G + + + +++ + K +F+E + G D
Sbjct: 439 GKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDR 498
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ F L+ Y G ++ M A N ++N +++ + + V
Sbjct: 499 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 558
Query: 191 LISQGCIPGQVTYASIINAYCRIGLY---------------------------------- 216
+ S+G P + +Y+ ++ Y + G Y
Sbjct: 559 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRA 618
Query: 217 -SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+ +E+ F ++ G+ +V ++SM++++ + A ++ + G P++ YNS
Sbjct: 619 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNS 678
Query: 276 LMDMHGRAKN-------LRQLEK---------YTTVISAY 299
LMDM+ R L+ LEK Y TVI +
Sbjct: 679 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF 718
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 19/284 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G V D+ Y +++ EK LF E + + +TP + Y IL DS
Sbjct: 446 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE--MKMVGVTPD-VYTYTILIDSF 502
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+G + F +M+ G Y +LI ++ +V A ++F + G +
Sbjct: 503 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 562
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDC-ISC--------------VIVNG 174
+ LV + G + K EV + ++ SD C +V+G
Sbjct: 563 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 622
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K A ++ + ++S GC P + Y ++I+ +C+ G A++VF++M + G+
Sbjct: 623 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 682
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y+S++ K GR+ AM+++++M C PNV Y +++D
Sbjct: 683 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 726
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 20/231 (8%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ LC +GK +AF+++K +M KG + D S Y+ +I +V+ A LF+E +
Sbjct: 430 RCLC-GVGKFDKAFQLIK---EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 485
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D+ + L+ + + G++E+ + E M++ + + +++ + K +
Sbjct: 486 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 545
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM----------------Q 227
A ++ +++ GC P VTY ++++ C+ G SKA +V+ ++
Sbjct: 546 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 605
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ VV Y ++V K ++ A L+ M GCEPN +Y++L+D
Sbjct: 606 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 656
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 16/175 (9%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K+Y ++++ C+ +V A+ C +G + KA ++ EM +KGF YS ++
Sbjct: 406 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 465
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------- 290
++ A L +MK G P+V+ Y L+D +A + Q +
Sbjct: 466 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 525
Query: 291 ---KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I AY A++ ++ G + G +V K I +
Sbjct: 526 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 580
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 110/275 (40%), Gaps = 39/275 (14%)
Query: 35 IGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEK----- 89
+ D+ ++ A F R++ + + Y L D+LG GRA + + R++ E+
Sbjct: 115 VRDAPELCARFFLWAERQVGYSHTGA-CYDALADALGFDGRARDAERLLREIGEEDREVL 173
Query: 90 ------------------------GILED----PS--VYASLICSFASIAEVKVAEELFK 119
G L+D PS Y +L+ +S +V + + K
Sbjct: 174 GRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQK 233
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E E G D +EG L+++E ++ +L+ C +++G +
Sbjct: 234 EMSESGFCMDRFTVGCFAHALCKEGRWADALDMIER-EDFKLDTVLCTH--MISGLMEAS 290
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+ A+ ++ CIP VTY ++++ + + +++ M +G + ++
Sbjct: 291 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 350
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
S+V Y A +L+ +M GC P +YN
Sbjct: 351 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN 385
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 4/263 (1%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAF-E 78
LD Y I+ ++ + G E+ A+F + L T + Y ++ D GK GR++ +
Sbjct: 207 LDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVT---YNVMLDVYGKMGRSWNK 263
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
IL +M+ KG+ D +++I + + A+E F + +G + L+
Sbjct: 264 ILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQ 323
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
++ + G+ + L +++ M++ +V + + Y + + + G P
Sbjct: 324 VFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKP 383
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
VTY ++INAY R KA ++ +M++ G V Y++++ M GK + + M+++
Sbjct: 384 NAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKIL 443
Query: 259 AKMKPKGCEPNVWIYNSLMDMHG 281
MK GC PN +N+++ M G
Sbjct: 444 CDMKVDGCAPNRITWNTMLSMCG 466
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 137/309 (44%), Gaps = 3/309 (0%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M AG Y ++ A + GD ++ + +++ PS T Y ++ +S
Sbjct: 513 YDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGF--KPSETS-YSLILNS 569
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G I + +D+ + I + +LI + + E F+ ++ G D
Sbjct: 570 YAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPD 629
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L VF ++ M+ + M ++ E++ ++ L +++ +++ W A ++
Sbjct: 630 LVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILR 689
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L + G ++Y ++I +CR GL +A + EM +G C+V Y++ V Y G
Sbjct: 690 ELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKG 749
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
+ +++ M C PN Y ++D + +AK ++ + + I+ + + ++
Sbjct: 750 MFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDFVSTITDIDDSFDYQSMR 809
Query: 310 KFYNEFRMN 318
+ + R N
Sbjct: 810 RLSSRVREN 818
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 128/301 (42%), Gaps = 13/301 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDS-EKVAALFLECESRKLDLTPSSTHMYKILCD 68
+EKM +G+ Y +++ + K+G S K+ L E S+ L + C
Sbjct: 232 FEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISAC- 290
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G+ G E +FF +K +G Y +L+ F A + KE E+
Sbjct: 291 --GREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPP 348
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + +LV Y+ G E+ ++++M + + ++N + + A+ +Y
Sbjct: 349 DAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLY 408
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+Q+ GC P TY +I+ + + K+ +M+ G + +++M++M G
Sbjct: 409 DQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNK 468
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------YTTVISAY 299
G + R+ +MK G EP+ +N+L+ GR + EK +T ++ Y
Sbjct: 469 GMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATY 528
Query: 300 N 300
N
Sbjct: 529 N 529
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 113/251 (45%), Gaps = 20/251 (7%)
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV-EKTLEV 152
D Y +++ S++ + + A +F++ E G+ L + ++ +Y + G K L +
Sbjct: 208 DVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGL 267
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
++ M++ L + +++ + A + + L SQG PG VTY +++ + +
Sbjct: 268 LDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGK 327
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
G+YS+A + EM+ V Y+ +VA Y + G + L+ M G +PN
Sbjct: 328 AGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVT 387
Query: 273 YNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
Y TT+I+AY A + D + Y++ + +G + ++G
Sbjct: 388 Y-------------------TTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILG 428
Query: 333 VFSKLSQIEEL 343
+ K SQ EE+
Sbjct: 429 MLGKKSQSEEM 439
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 122/284 (42%), Gaps = 3/284 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++M+S G+ D ++ A + G ++ F+ +S+ T Y L
Sbjct: 265 LGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGY---APGTVTYNAL 321
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
GK+G E L ++M++ D Y L+ ++ + L E G+
Sbjct: 322 LQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGI 381
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + ++ Y V+K L + + MK + + C I+ K+ +K
Sbjct: 382 KPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMK 441
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + GC P ++T+ ++++ G++ ++VF EM+ GF+ +++++ G
Sbjct: 442 ILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASG 501
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ G DA ++ +M G P+V YN+L++ R + R E
Sbjct: 502 RCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAE 545
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 132/310 (42%), Gaps = 21/310 (6%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y++MK +G + Y I+ K SE++ + + K+D + + +
Sbjct: 405 LSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDM---KVDGCAPNRITWNTM 461
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
G G + + F++MK G D + +LI + AE+++ E E G
Sbjct: 462 LSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGF 521
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ G V++ MKN S+ +I+N ++K Y +
Sbjct: 522 TPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKG-GYVKGIN 580
Query: 187 VYEQLISQGCI-PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
E+ I G I P + ++I A + + E+ F +Q+ G+ +V ++SM++M+
Sbjct: 581 RIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMF 640
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLEK------- 291
+ A ++ ++ G +P++ YNSLMD++ R LR+L+
Sbjct: 641 SRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDL 700
Query: 292 --YTTVISAY 299
Y TVI +
Sbjct: 701 ISYNTVIKGF 710
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 131/300 (43%), Gaps = 34/300 (11%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ +KS G + Y +++ F K G + ++ E E P Y L
Sbjct: 302 FFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNN---CPPDAVTYNELVA 358
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ ++G E M E GI + Y ++I ++ A+V A L+ + +E G
Sbjct: 359 AYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAP 418
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV--- 185
++ + ++ M ++ E+ ++++ MK V+G + R W +
Sbjct: 419 NVCTYNAILGMLGKKSQSEEMMKILCDMK--------------VDGCAPNRITWNTMLSM 464
Query: 186 -----------KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+V++++ S G P + T+ ++I A R G AEK++ EM + GF
Sbjct: 465 CGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPS 524
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK 291
V Y++++ + G R A ++ MK KG +P+ Y+ +++ + G K + ++EK
Sbjct: 525 VATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEK 584
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 116/261 (44%), Gaps = 20/261 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L + G+ G + K + +M E G + Y +L+ + A + + AE + K+ +
Sbjct: 493 FNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMK 552
Query: 123 EKGMLRDLEVFLKLVL-MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
KG + E L+L Y + G V+ + + + + + S + ++ K RA
Sbjct: 553 NKG-FKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRAL 611
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ ++ L G P V + S+++ + R ++ +A ++ +Q+ G +V Y+S+
Sbjct: 612 AGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSL 671
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------MHGRAKNLRQLEKYTT 294
+ +Y + G A ++ +++ G + ++ YN+++ MH + L ++
Sbjct: 672 MDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEM----- 726
Query: 295 VISAYNMAREFDMCVKFYNEF 315
++R C+ YN F
Sbjct: 727 ------ISRGIRPCIVTYNTF 741
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+S A K+F + + V AY++++ Y + G+ A+ + KM G P + YN
Sbjct: 190 HSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNV 249
Query: 276 LMDMHGR 282
++D++G+
Sbjct: 250 MLDVYGK 256
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 168/353 (47%), Gaps = 29/353 (8%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ K+K++GI D Y ++ + K ++ L E ++ L P + Y IL ++
Sbjct: 118 FSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLL--AEMKEAGLMPDTVS-YTILINA 174
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK-GMLR 128
+S + E + F +MK KGI D + +I + + V+ AEELF + G+ +
Sbjct: 175 YAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQ 234
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKN---AELNISDCISCVIVNGFSKRRAYWAAV 185
++ + ++ +Y E ++ + V M+N E N+ + + ++G + + A+
Sbjct: 235 NVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHE--KAM 292
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++ ++ +G P VTY+++I+ Y + G Y +A +F +++KGF+ + Y SM+ +Y
Sbjct: 293 RLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVY 352
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-------------- 291
+ G + A RL+ ++K +P++ ++ + + +A+ L + K
Sbjct: 353 ERAGLVAHAKRLLEELK----QPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKES 408
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y ++I + + + + R +G + D +++ + +L Q+E+
Sbjct: 409 VTYKSMIQLFVRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLED 461
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 124/305 (40%), Gaps = 53/305 (17%)
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M EK ++ D +++LI + ++ A +E E G+ DL +F L+ + +
Sbjct: 50 EMVEKDLVPDKFTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVK 109
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
K + +K + + I ++N + K + Y A + ++ G +P V+Y
Sbjct: 110 DYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYT 169
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+INAY Y +A++VF+EM+ KG V + M+ +YGK +RDA L M
Sbjct: 170 ILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKT 229
Query: 265 -------------------------------------GCEPNVWIYNSLMDMHG----RA 283
G EPNV YN+++ +HG
Sbjct: 230 LGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHE 289
Query: 284 KNLRQLEK------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
K +R + K Y+T+IS Y ++D + R G +D + M+
Sbjct: 290 KAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMI 349
Query: 332 GVFSK 336
V+ +
Sbjct: 350 VVYER 354
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 111/246 (45%), Gaps = 19/246 (7%)
Query: 95 PSVYA--SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
PS++A ++ + + ++AE L E EK ++ D F L+ Y +E +
Sbjct: 23 PSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDAMGW 82
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
++ M+ + I ++ K + Y A ++ +L + G P +V Y S+IN Y +
Sbjct: 83 LQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGK 142
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
Y +A+ + EM++ G V+Y+ ++ Y ++ + +A ++ +MK KG + +V
Sbjct: 143 AKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTT 202
Query: 273 YNSLMDMHGRAKNLRQLEK-----------------YTTVISAYNMAREFDMCVKFYNEF 315
N ++D++G+ + +R E+ Y T+I Y A +
Sbjct: 203 CNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYM 262
Query: 316 RMNGGV 321
+ GGV
Sbjct: 263 QNKGGV 268
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 106/240 (44%), Gaps = 32/240 (13%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
++ R M+++GI + Y++LI + + A LFK EKG D ++ ++++
Sbjct: 292 MRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVV 351
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA---YW-------------- 182
Y G+V ++E +K ++ D ++ A YW
Sbjct: 352 YERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTY 411
Query: 183 --------------AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
A+ V+E + G +P T ++ AY ++ AEK++++M++
Sbjct: 412 KSMIQLFVRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRE 471
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+G + M+ +YG +IR+A + A +K +G + + +Y +++ ++ RA L +
Sbjct: 472 RGCTLEKEVHFQMLKLYGDARKIREAEDMFAALKLEGLDGDE-LYLTMIRIYERASKLNE 530
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 80/199 (40%), Gaps = 51/199 (25%)
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G P Y ++ R + AE + +EM +K +S++++ YG+ R+ DA
Sbjct: 20 GYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDA 79
Query: 255 M-----------------------------------RLVAKMKPKGCEPNVWIYNSLMDM 279
M L +K+K G P+ IYNS++++
Sbjct: 80 MGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINL 139
Query: 280 HGRAKNLRQLE----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
+G+AK ++ + YT +I+AY ++++ + + E + G +D
Sbjct: 140 YGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLD 199
Query: 324 RAMAGIMVGVFSKLSQIEE 342
+M+ V+ KL + +
Sbjct: 200 VTTCNMMIDVYGKLEMVRD 218
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 3/275 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L Y ++M G+ + Y ++ A + G + L E + L Y
Sbjct: 608 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLA---PDVFTY 664
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL + K G + L+ F +M +G+ Y +LI + + +V+ ++LF EA
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ DL ++ L+ + G +++ E++ M+ + D ++ G
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K+ +++ +G P VTY ++I+ Y G A ++ EM KGF+ ++ Y++++
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G+ DA +V +M G P+ Y SL++
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 879
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 140/313 (44%), Gaps = 36/313 (11%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDL-TPSSTHMY 63
+ L Y +MKS + + + ++ A S ALF + +L L T + M
Sbjct: 440 TSLRLYSRMKSLSLPISTASLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIML 495
Query: 64 KILCDSLGKSGRAFEILK----------------------------FFRDMKEKG-ILED 94
+ LC S GK RA E+L+ R+M+E+G I +
Sbjct: 496 RHLC-SAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPN 554
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV-FLKLVLMYIEEGMVEKTLEVV 153
Y ++I + + V A ++F E KG ++ V + L+ Y ++G ++ L
Sbjct: 555 QYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR 614
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ M + ++ ++V+ A ++ E++ +G P TY +IN +C+
Sbjct: 615 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 674
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G KA ++F M ++G VV Y++++ K G++++ +L + +G P++ +Y
Sbjct: 675 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 734
Query: 274 NSLMDMHGRAKNL 286
N+L++ H + N+
Sbjct: 735 NALINSHSTSGNI 747
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 23/318 (7%)
Query: 4 QSKLHYYEKMKS-AGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
Q+ L +M+ GI + Y ++ + K+G ++ +F E + K ++ P + M
Sbjct: 536 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKPEAV-M 593
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L G+ L + M E+G+ + Y L+ + A EL +E
Sbjct: 594 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 653
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + L+ + +EG V+K LE+ E+M + + ++ SK+
Sbjct: 654 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 713
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
K++++ + +G P V Y ++IN++ G +A ++ EM++K V Y++++
Sbjct: 714 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 773
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
GR+ +A +L+ +M +G +P++ YN T+IS Y+M
Sbjct: 774 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYN-------------------TLISGYSMK 814
Query: 303 REFDMCVKFYNEFRMNGG 320
+ ++ NE MN G
Sbjct: 815 GDVKDALRIRNEM-MNKG 831
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 75/212 (35%), Gaps = 42/212 (19%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSS 59
N + L +E M G+ Y ++ A K G ++ LF E R + DL
Sbjct: 676 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV--- 732
Query: 60 THMYKILCDSLGKSG---RAFEIL--------------------------------KFFR 84
+Y L +S SG RAFEI+ K
Sbjct: 733 --LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 790
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M E+GI D Y +LI ++ +VK A + E KG L + L+ + G
Sbjct: 791 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 850
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ +V+ M + D ++ G +
Sbjct: 851 QGDDAENMVKEMVENGITPDDSTYISLIEGLT 882
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 140/305 (45%), Gaps = 20/305 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y I++ F KIGD + F K+ S Y ++ L ++G+
Sbjct: 478 YTIIIDGFMKIGD---LRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIID 534
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M G+ + Y +LI +A I ++ +A + F +E G+ D+ + L+ + G
Sbjct: 535 EMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAG 594
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ TL + M A + +++ I ++++G+++R W A + +++ +G P +Y
Sbjct: 595 RMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYT 654
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S INA C+ G KA + +M+Q+G + AY++++ + A+ +MK
Sbjct: 655 SFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSA 714
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE--FDMCVKFYNEFRMNGGVI 322
G P+ +Y+ +M T+++S +ARE FD ++ +E G +
Sbjct: 715 GMIPDKPLYHCIM---------------TSLLSRAAVARETVFDGVLRVTSEMVDQGICV 759
Query: 323 DRAMA 327
D A A
Sbjct: 760 DFATA 764
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 12/263 (4%)
Query: 19 VLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS---LGKSGR 75
V+ GC ++ + K+G +K + E E + + + Y ++ D LG +
Sbjct: 370 VVSYGC---LINLYSKLGKMDKALQISNEMEDQGIK---HNRKTYSMIIDGYVQLGDTAN 423
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
AF + F DM GI D Y L+ +F ++ A EL E L +
Sbjct: 424 AFSV---FEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTI 480
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
++ +++ G + E V MK A S VI++G ++ A + ++++ G
Sbjct: 481 IIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAG 540
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
P + +Y ++I Y IG A K F +++ G V+AY+S++ K GR++ +
Sbjct: 541 VHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTL 600
Query: 256 RLVAKMKPKGCEPNVWIYNSLMD 278
+ A+M G N +IYN L+D
Sbjct: 601 AITAEMAAAGVPMNNYIYNILLD 623
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 133/282 (47%), Gaps = 8/282 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M++AGI + Y ++ A+ D A E E+ + +P++ Y ++
Sbjct: 215 FESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGV--SPNAA-TYSVIISG 271
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ G ++F+ + + +Y ++I ++ ++ AE + EE+G+
Sbjct: 272 YGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEAT 331
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMK-NAELNISDCI---SCVIVNGFSKRRAYWAAV 185
L ++ L+ Y+ V+K L V +K E +S + C+I N +SK A+
Sbjct: 332 LGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLI-NLYSKLGKMDKAL 390
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++ ++ QG + TY+ II+ Y ++G + A VF +M G + Y+ ++ +
Sbjct: 391 QISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAF 450
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
K G++ A+ L+A+M+ C P + Y ++D + +LR
Sbjct: 451 CKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLR 492
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 124/298 (41%), Gaps = 25/298 (8%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y I+ A+ K G+ E+ A+ E + L+ T +Y +L D + L FR
Sbjct: 300 YNNIIHAYCKAGNMERAEAIMTAMEEQGLEAT---LGLYNMLMDGYVHCRAVDKCLNVFR 356
Query: 85 DMK---EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
+K E G+ Y LI ++ + ++ A ++ E E++G+ + + + ++ Y+
Sbjct: 357 RLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYV 416
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ G V E M NA + +++N F K A+++ ++ S C P
Sbjct: 417 QLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLR 476
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY II+ + +IG A + +M+ GF Y+ ++ + G++ A ++ +M
Sbjct: 477 TYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEM 536
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
G PN YTT+I Y + + K++N + G
Sbjct: 537 VVAGVHPNE-------------------RSYTTLIEGYACIGDMGLAFKYFNRIKEVG 575
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/353 (18%), Positives = 150/353 (42%), Gaps = 20/353 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +M+ GI + Y I++ + ++GD+ ++F + + + P Y IL
Sbjct: 390 LQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSN--AGIKPDGI-TYNIL 446
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
++ K+G+ L+ M+ Y +I F I ++++A E ++ + G
Sbjct: 447 MNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGF 506
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ ++ + G +++ +++ M A ++ ++ ++ G++ A K
Sbjct: 507 RPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFK 566
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ G P + YAS++ A C+ G + EM G Y+ ++ +
Sbjct: 567 YFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWA 626
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQ---------LE 290
+ G + +A ++ KM+ +G P++ Y S + DM + + Q L+
Sbjct: 627 QRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQ 686
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAG-IMVGVFSKLSQIEE 342
YTT+I + A + + Y+E + G + D+ + IM + S+ + E
Sbjct: 687 AYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARE 739
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
LV Y + G ESM+ A + + +++ ++ + A+ E++ ++G
Sbjct: 198 LVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEG 257
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
P TY+ II+ Y R+G AE+ F + + V Y++++ Y K G + A
Sbjct: 258 VSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAE 317
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEF 315
++ M+ +G E + +YN LMD Y R D C+ +
Sbjct: 318 AIMTAMEEQGLEATLGLYNMLMD-------------------GYVHCRAVDKCLNVFRRL 358
Query: 316 --RMNGGVIDRAMA-GIMVGVFSKLSQIEE 342
R G+ ++ G ++ ++SKL ++++
Sbjct: 359 KARTETGLSPTVVSYGCLINLYSKLGKMDK 388
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 91/216 (42%), Gaps = 38/216 (17%)
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
L+ + + A F+ G+ ++ + L+ Y + + VE M+
Sbjct: 198 LVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEG 257
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
++ + VI++G+ + AA + +++ +S+ V Y +II+AYC+ G +AE
Sbjct: 258 VSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAE 317
Query: 221 KVFIEMQQKGF--------------------DKC------------------VVAYSSMV 242
+ M+++G DKC VV+Y ++
Sbjct: 318 AIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLI 377
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+Y K G++ A+++ +M+ +G + N Y+ ++D
Sbjct: 378 NLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIID 413
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P Q + ++N Y + G A F M+ G + V +Y++++ Y +R A+
Sbjct: 190 PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIAC 249
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
V +M+ +G PN Y+ ++ +GR ++ E++
Sbjct: 250 VEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERW 284
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 5/269 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK-LDLTPSSTHMYKILCDS 69
+M G+ D+ Y ++ + +G ++ +F E SR + T + + LC
Sbjct: 270 RQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLC-- 327
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K GR E +FF M KG + Y++L+ +A+ + LF G++ +
Sbjct: 328 --KHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPN 385
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
VF LV Y + GMV + + + E M+ LN +++ F + + A+ +
Sbjct: 386 QHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFN 445
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I +G P Y +I +C G KAE++ E++ KG C+++++S++ K G
Sbjct: 446 HMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEG 505
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
R+ +A R+ + G + +V I+ SL+D
Sbjct: 506 RVFEAQRIFDMIIRTGEKADVNIFTSLID 534
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 119/256 (46%), Gaps = 9/256 (3%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ +K G + LF E + + P + Y + +L K+ + R
Sbjct: 214 YSTVVHGLFKEGKVGEACDLFHEMTQQGV---PPNVVTYNSVIHALCKARAVDKAQGILR 270
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M G+ D Y +LI ++++ + K A +FKE +G++ + V + G
Sbjct: 271 QMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHG 330
Query: 145 MVEKTLEVVESM--KNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+E+ E +SM K +LNI IS +++G++ ++ ++ G +P Q
Sbjct: 331 RIEEAREFFDSMLAKGHKLNI---ISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQH 387
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
+ ++N Y + G+ +A +F +MQ++G + V+ Y +++ + + G + DAM M
Sbjct: 388 VFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHM 447
Query: 262 KPKGCEPNVWIYNSLM 277
KG EPN +Y L+
Sbjct: 448 IDKGVEPNFAVYQCLI 463
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 3/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+++ M + G L+ Y ++ + G ++ LF D + H++ IL +
Sbjct: 338 FFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLF---NLMVRDGIVPNQHVFNILVN 394
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G E + F DM+++G+ D Y ++I +F + + A + F +KG+
Sbjct: 395 GYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEP 454
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ V+ L+ + G + K E+V ++N L ++N K + A +++
Sbjct: 455 NFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIF 514
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ +I G + S+I+ YC IG S+A +V M G + +V Y ++V K
Sbjct: 515 DMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKN 574
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GRI D + L ++ KG +P + Y ++D
Sbjct: 575 GRIDDGLILFRELLHKGVKPTTFTYGIILD 604
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 114/232 (49%), Gaps = 4/232 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE-DPSVYASLICSFASIAEVKVAEE 116
S + + K +CD G+S A +IL+ +K+ G + VY++++ +V A +
Sbjct: 176 SYSTVLKSVCDD-GRSQWALDILRM--AVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACD 232
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF E ++G+ ++ + ++ + V+K ++ M + + +++G+S
Sbjct: 233 LFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYS 292
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ AV++++++ S+G IP VT ++ + C+ G +A + F M KG ++
Sbjct: 293 TLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNII 352
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+YS+++ Y G + D L M G PN ++N L++ + + +R+
Sbjct: 353 SYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVRE 404
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 130/309 (42%), Gaps = 29/309 (9%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE- 116
+ + Y IL D ++ R FF + +G+ D V +SL+ + + K +E
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLL---RGLCDAKRTDEA 157
Query: 117 ---LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV----VESMKNAELNISDCISC 169
LF E G + D + ++ ++G + L++ V+ N+ +
Sbjct: 158 VDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNV--VVYS 215
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+V+G K A ++ ++ QG P VTY S+I+A C+ KA+ + +M
Sbjct: 216 TVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGN 275
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNL 286
G V Y++++ Y G+ + A+R+ +M +G PN ++ + HGR +
Sbjct: 276 GVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEA 335
Query: 287 RQ-------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
R+ + Y+T++ Y A +N +G V ++ + I+V
Sbjct: 336 REFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNG 395
Query: 334 FSKLSQIEE 342
++K + E
Sbjct: 396 YAKCGMVRE 404
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/292 (18%), Positives = 118/292 (40%), Gaps = 3/292 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M+ G+ D Y ++ AF ++G + F + ++ + +Y+ L
Sbjct: 409 FEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVE---PNFAVYQCLIQG 465
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G + + +++ KG+ +ASLI V A+ +F G D
Sbjct: 466 FCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKAD 525
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ +F L+ Y G + + V ++M + + +VNG K + ++
Sbjct: 526 VNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFR 585
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L+ +G P TY I++ G + A+++F EM + G + YS ++ +
Sbjct: 586 ELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNN 645
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+A+ + K+ + ++ I N ++ +A+ + E I Y +
Sbjct: 646 CTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGL 697
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 110/269 (40%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M G+ + Y +++ F GD K L E ++ L S + L +
Sbjct: 444 FNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILS---FASLINH 500
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K GR FE + F + G D +++ SLI + I ++ A + G+ D
Sbjct: 501 LCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPD 560
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + LV + G ++ L + + + + + +I++G AA ++++
Sbjct: 561 IVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQ 620
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++I G TY+ ++ CR +A VF ++ +V + M++ K
Sbjct: 621 EMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKAR 680
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
R +A L A + G P V Y +M+
Sbjct: 681 RREEAEGLFASIPDYGLVPTVQTYTIMME 709
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 68/169 (40%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K+GR + L FR++ KG+ Y ++ A+E+F+E
Sbjct: 564 YGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMI 623
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G+ + + L+ E+ + V + + + I ++++ K R
Sbjct: 624 ESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRRE 683
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A ++ + G +P TY ++ + G +AE VF M + G
Sbjct: 684 EAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGL 732
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 107/213 (50%), Gaps = 3/213 (1%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
AF+I++ R K + S Y LI + + + E LF + +E G ++ +F
Sbjct: 179 AFDIIQTMRKFKFRPAF---SAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTT 235
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
L+ ++ EG V+ L +++ MK+ L+ + V ++ F K + K + ++ S G
Sbjct: 236 LIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHG 295
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
+P VTY S+I C+ +A ++F +++Q C AY++M+ YG G+ +A
Sbjct: 296 LMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAY 355
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
L+ + K KG P+V YN ++ G+ + + +
Sbjct: 356 GLLERQKAKGSIPSVIAYNCILTCLGKKRRVEE 388
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 133/297 (44%), Gaps = 16/297 (5%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L S K GR + K +++M G D ++ + + E + LF+E
Sbjct: 511 VYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI 570
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G + D + L+ ++ G+ +T E+ +MK + +++GF K
Sbjct: 571 NAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKV 630
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++ E++ +G P VTY S+I+ +I +A +F E + G VV YSS+
Sbjct: 631 NKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSL 690
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------KNLRQLE- 290
+ +GK GRI +A ++ ++ KG PNV+ +N L+D +A ++++ L+
Sbjct: 691 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKC 750
Query: 291 -----KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ +I+ R+F+ F+ E + G + M+ +K I E
Sbjct: 751 PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILE 807
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 146/343 (42%), Gaps = 29/343 (8%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-----CESRKLDLTPSSTHMYK 64
YEKM G V + Y ++ +F+K G E ++ E C DLT +T+M
Sbjct: 497 YEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSP---DLTLINTYM-- 551
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
D + K+G + FR++ G + D Y+ LI ELF +E+
Sbjct: 552 ---DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 608
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G + D + ++ + + G V K +++E MK + +++G +K A
Sbjct: 609 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 668
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++E+ S G V Y+S+I+ + ++G +A + E+ QKG V ++ ++
Sbjct: 669 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 728
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK------ 291
K I +A+ MK C PN Y+ L++ R + ++++K
Sbjct: 729 LVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPN 788
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
YTT+IS A ++ F+ NGG+ D A M+
Sbjct: 789 TITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 831
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 3/276 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G VLD+ Y +++ F K G K L E K+ P + Y + D L K
Sbjct: 605 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL---EEMKVKGHPPTVVTYGSVIDGLAK 661
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R E F + K GI + VY+SLI F + + A + +E +KG+ ++
Sbjct: 662 IDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 721
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ ++ + + L +SMK+ + + +++NG + R + A ++++
Sbjct: 722 WNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQ 781
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P +TY ++I+ + G +A +F + G +Y++M+ +
Sbjct: 782 KLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAM 841
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
DA L + + KGC + L+D +A+ L Q
Sbjct: 842 DAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQ 877
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 122/271 (45%), Gaps = 6/271 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECE-SRKLDLTPSSTHMYKILC 67
++ +MKS G++ D Y ++ K ++ LF + E +RK+ + Y +
Sbjct: 287 FFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKV----PCAYAYNTMI 342
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
G +G+ E K KG + Y ++ V+ A +F+E + + +
Sbjct: 343 MGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAV 401
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ + L+ M EG + LE+ + M+ A L + ++++ K + A +
Sbjct: 402 PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSI 461
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+E + + C P VT++S+I+ + G A ++ +M G + Y+S++ + K
Sbjct: 462 FEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFK 521
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR D ++ +M GC P++ + N+ MD
Sbjct: 522 CGRKEDGHKIYKEMVHTGCSPDLTLINTYMD 552
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 63/291 (21%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP++ + L D LGK GR + + M + G + VY SLI SF +
Sbjct: 471 TPNAV-TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 529
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+++KE G DL + I+ + CV G
Sbjct: 530 KIYKEMVHTGCSPDLTL------------------------------INTYMDCVFKAGE 559
Query: 176 SKR-RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+++ RA ++ ++ + G IP +Y+ +I+ + GL ++ ++F M+++G C
Sbjct: 560 TEKGRA------LFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG---C 610
Query: 235 VV---AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
V+ AY++++ + K+G++ A +L+ +MK KG P V Y S++D G AK R E
Sbjct: 611 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVID--GLAKIDRLDEA 668
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y + E + NG ++ + ++ F K+ +I+E
Sbjct: 669 YM-----------------LFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDE 702
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/264 (18%), Positives = 105/264 (39%), Gaps = 16/264 (6%)
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
P Y SL+ A E E + +E G + ++LV ++ + + ++++
Sbjct: 125 PEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQ 184
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
+M+ + + +++ S+ R + ++ Q+ G + ++I + R G
Sbjct: 185 TMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREG 244
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
A + EM+ D +V Y+ + +GK G++ + + +MK G P+ Y
Sbjct: 245 RVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYT 304
Query: 275 SLMDMHGRAKNL-------RQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMN 318
S++ + +A L QLE+ Y T+I Y A +FD +
Sbjct: 305 SMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAK 364
Query: 319 GGVIDRAMAGIMVGVFSKLSQIEE 342
G + ++ K ++EE
Sbjct: 365 GSIPSVIAYNCILTCLGKKRRVEE 388
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 124/268 (46%), Gaps = 15/268 (5%)
Query: 53 LDLTPSSTHMYKILCDSLG-KSGRAF-EILKFFRDMKEKGILED-PSVYASLICSFASIA 109
L TPS + + L + G F E L FF + + P +YAS++ A
Sbjct: 89 LPSTPSPHLTFHVFGRLLALRRGIPFPEALAFFNHVLPSLPTDSLPELYASMMDLLAKHH 148
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD-CIS 168
+A L E ++ + +V L L+ Y+ GM + ++ SM+ + D +
Sbjct: 149 HFPLARHLLDEMRKRSIPISSQVILALIRRYVRAGMSSEASDLFRSMEEYGGGVPDPAVL 208
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
++ SK+R A +++ S P V Y ++++A+CR G KAE+VF EMQQ
Sbjct: 209 ASLLGALSKKRLASEAQALFDSYKSV-FTPDVVLYTTLVHAWCRSGCLDKAEQVFAEMQQ 267
Query: 229 KGFDKCVVAYSSMV-AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
G V Y++++ AMY + G++ A L+ +M GC PN +N++M H +A
Sbjct: 268 AGIMPNVYTYTAVIDAMY-RAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSE 326
Query: 288 QLEKYTTVISAYNMAREF--DMCVKFYN 313
Q V+ +N R+ D + YN
Sbjct: 327 Q------VLQVHNQMRQLGCDPDIITYN 348
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 16/269 (5%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G V D ++ A K + + ALF +S K TP +Y L + +SG
Sbjct: 200 GGVPDPAVLASLLGALSKKRLASEAQALF---DSYKSVFTPDVV-LYTTLVHAWCRSGCL 255
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
+ + F +M++ GI+ + Y ++I + +V A+EL + + G + F +
Sbjct: 256 DKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAI 315
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF-------SKRRAYWAAVKVYE 189
+ +++ G E+ L+V M+ C +I F + AA+K+
Sbjct: 316 MRAHVKAGRSEQVLQVHNQMRQL-----GCDPDIITYNFLMETHCGKGQSNLDAAMKLLL 370
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++I++GC P T+ ++ +G A K++ MQ+ V+ Y+ ++ ++GK
Sbjct: 371 KMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDK 430
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +R+ M +G EPNV Y +L++
Sbjct: 431 SMDMVLRIKKDMDAQGVEPNVNTYGALIE 459
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 39/253 (15%)
Query: 72 KSGRAFEILKFFRDMKE-KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G + E FR M+E G + DP+V ASL+ + + A+ LF ++ + D+
Sbjct: 181 RAGMSSEASDLFRSMEEYGGGVPDPAVLASLLGALSKKRLASEAQALF-DSYKSVFTPDV 239
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
++ LV + G ++K +V M+ A + + +++ + A ++ Q
Sbjct: 240 VLYTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQ 299
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I GC P T+ +I+ A+ + G + +V +M+Q G D ++ Y+ ++ + G+
Sbjct: 300 MIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQ 359
Query: 251 --IRDAMRLVAKMKPKGC-----------------------------------EPNVWIY 273
+ AM+L+ KM KGC +PNV Y
Sbjct: 360 SNLDAAMKLLLKMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITY 419
Query: 274 NSLMDMHGRAKNL 286
N LM + G+ K++
Sbjct: 420 NLLMKLFGKDKSM 432
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 113/259 (43%), Gaps = 6/259 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ AGI+ + Y +++A Y+ G + L + P +T + + +
Sbjct: 262 FAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSG---CPPNTATFNAIMRA 318
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE--VKVAEELFKEAEEKGML 127
K+GR+ ++L+ M++ G D Y L+ + + + A +L + KG
Sbjct: 319 HVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMIAKGCT 378
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D F ++ + + G V+ ++ E M+ + + +++ F K ++ +++
Sbjct: 379 PDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLRI 438
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ-KGFDKCVVAYSSMVAMYG 246
+ + +QG P TY ++I +C G + +A EM + K Y ++ +
Sbjct: 439 KKDMDAQGVEPNVNTYGALIETFCGRGNWKRAYATLREMLEVKSLKPKKPVYDMVLVLLR 498
Query: 247 KTGRIRDAMRLVAKMKPKG 265
K G++R LV M +G
Sbjct: 499 KAGQLRKHEELVELMADRG 517
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 131/279 (46%), Gaps = 10/279 (3%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH-MYKILCDSLGKSGRAF- 77
LD Y ++ A G E+ LF E + + + TH MY ++ D G+ GR++
Sbjct: 185 LDVRAYTTVLHALSHEGRYERALELFAELKREGV----APTHVMYNVMLDVYGRMGRSWP 240
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
+I+ +M+ G+ D +++I + V A F++ + +G + + + L+
Sbjct: 241 QIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALL 300
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
++ + G + L V++ M+ + + +++ Y A K + ++S+G +
Sbjct: 301 QVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGIL 360
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P TY +I+ AY G +A +F M++ GF V Y+ ++ M GK R + +
Sbjct: 361 PNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEM 420
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
+ +M GC PN +N+++ + G+ R +E Y T +
Sbjct: 421 LGEMSRSGCTPNRVTWNTMLAVCGK----RGMEGYVTRV 455
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 123/275 (44%), Gaps = 3/275 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M +AG Y ++ + GD ++ + ++ S Y +L
Sbjct: 491 YDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMS---YSLLLQC 547
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G A I +++ E + + +L+ S ++ E F+E +G D
Sbjct: 548 HAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPD 607
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L +F ++ MY + GM K E+ +S+K L+ +++ ++K W A K+ +
Sbjct: 608 LVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILK 667
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L + P V+Y +++N +C+ GL +A+++ EM G CVV Y ++V Y
Sbjct: 668 RLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASRE 727
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+A +V+ M + P Y ++D + +AK
Sbjct: 728 MFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKAK 762
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 131/315 (41%), Gaps = 38/315 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M++AG+ D ++ A + G ++ A F + +SR P Y L
Sbjct: 247 EEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSR--GHVPCVV-TYNALLQVF 303
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK+G E L+ ++M+E G D Y L S+A + A + KG+L +
Sbjct: 304 GKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNA 363
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y G V++ L + + MK +I+ K+ + +++ +
Sbjct: 364 FTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGE 423
Query: 191 LISQGCIPGQVTY-----------------------------------ASIINAYCRIGL 215
+ GC P +VT+ ++I+AY R G
Sbjct: 424 MSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGS 483
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+ A K++ EM GF C+ Y++++++ + G A ++ KMK +G +PN Y+
Sbjct: 484 RANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSL 543
Query: 276 LMDMHGRAKNLRQLE 290
L+ H + N +E
Sbjct: 544 LLQCHAKGGNAAGIE 558
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 109/229 (47%), Gaps = 17/229 (7%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA-VKV 187
D+ + ++ EG E+ LE+ +K + + + V+++ + + W V +
Sbjct: 186 DVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAM 245
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
E++ + G P T +++I A R GL +A F +++ +G CVV Y++++ ++GK
Sbjct: 246 LEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGK 305
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
G +A+R++ +M+ GC+P+ YN L + RA + K
Sbjct: 306 AGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFT 365
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y T+++AY A + D + ++ + NG + +++G+ K S+
Sbjct: 366 YNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRF 414
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 114/243 (46%), Gaps = 3/243 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KMK+ G + Y +++ K G++ + A+ E E + + PS + + L S
Sbjct: 528 KMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAI--EKEVYEGTVFPSWV-ILRTLVISNF 584
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K R I + F+++ +G D ++ S++ +A + A E+F ++ G+ DL
Sbjct: 585 KCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLI 644
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ ++ MY + + ++++ +K ++L ++NGF K+ A ++ ++
Sbjct: 645 TYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEM 704
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
I+ G P VTY +++ Y ++S+A +V M Q+ + Y +V Y K R
Sbjct: 705 IADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKAKRF 764
Query: 252 RDA 254
+A
Sbjct: 765 DEA 767
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 127/317 (40%), Gaps = 40/317 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M S GI+ ++ Y IM A+ G ++ ALF +K P + Y ++ L
Sbjct: 352 DTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWM--KKNGFIPY-VNTYNLILGML 408
Query: 71 GKSGRAFEILKFFRDMKEKG--------------------------ILED---------P 95
GK R +L+ +M G +LE
Sbjct: 409 GKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCR 468
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
+ +LI ++ A +++ E G L + L+ + +G ++
Sbjct: 469 DTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINK 528
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIG 214
MKN +D +++ +K A ++ E+ + +G + P V +++ + +
Sbjct: 529 MKNEGFKPNDMSYSLLLQCHAKG-GNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCR 587
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
E+ F E+ +G +V ++SM++MY K G R A + +K G P++ YN
Sbjct: 588 RLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYN 647
Query: 275 SLMDMHGRAKNLRQLEK 291
S+MDM+ ++ + EK
Sbjct: 648 SMMDMYAKSNESWEAEK 664
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/319 (18%), Positives = 133/319 (41%), Gaps = 40/319 (12%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L ++M+ +G D+ Y ++ ++ + G E+ A S+ + P++
Sbjct: 308 NYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSK--GILPNA-F 364
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + + G +G+ E L F MK+ G + + Y ++ + V E+ E
Sbjct: 365 TYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEM 424
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G + + ++ + + GM V+E MK+ + + +++ + + +
Sbjct: 425 SRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSR 484
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K+Y+++ + G P TY ++++ R G ++ A+ + +M+ +GF ++YS +
Sbjct: 485 ANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLL 544
Query: 242 VAMYGKTG-----------------------------------RIRDAMRLVAKMKPKGC 266
+ + K G R+ R ++ +G
Sbjct: 545 LQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGH 604
Query: 267 EPNVWIYNSLMDMHGRAKN 285
+P++ I+NS++ M+ AKN
Sbjct: 605 KPDLVIFNSMLSMY--AKN 621
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ F +K+ G+ D Y S++ +A E AE++ K + + D+ + ++ +
Sbjct: 629 EMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGF 688
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCI-SCVI-----VNGFSKRRAYWAAVKVYEQLISQ 194
++G++++ ++ M I+D + CV+ V G++ R + A +V +I +
Sbjct: 689 CKQGLIKEAQRILSEM------IADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQR 742
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
P ++TY ++++YC+ + +A E+ +
Sbjct: 743 NLSPMELTYRRVVDSYCKAKRFDEARGFLYEIAE 776
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ F+K GD K LF E R + P Y + +L K+ + F R
Sbjct: 188 YNTVIDGFFKEGDVNKACDLFKEMVQRGI---PPDLVTYNSVVHALCKARAMDKAEAFLR 244
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M K +L + Y +LI ++S + K A +FKE +L D+ L+ + G
Sbjct: 245 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 304
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ +V ++M N +++NG++ + +++ ++ G P T+
Sbjct: 305 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 364
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
I AY G+ KA +F EM+ G VV Y +++A + G++ DAM +M +
Sbjct: 365 VQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 424
Query: 265 GCEPNVWIYNSLM 277
G P+ + YN L+
Sbjct: 425 GVAPDKYAYNCLI 437
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 138/325 (42%), Gaps = 46/325 (14%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ ++ G+ +D+ +++ F + +++ + L + +L P Y IL
Sbjct: 97 LAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLH-RTPELGCVPD-VFSYNIL 154
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
SL G++ + R M E G + P V Y ++I F +V A +LFKE ++
Sbjct: 155 LKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 214
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ DL + +V+ K RA A
Sbjct: 215 GIPPDLVTYNS-----------------------------------VVHALCKARAMDKA 239
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
Q++++ +P TY ++I Y G + +A +VF EM++ VV S ++
Sbjct: 240 EAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGS 299
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
K G+I++A + M KG P+V+ YN +++ + L + ++ +A +
Sbjct: 300 LCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 359
Query: 305 ---FDMCVKFYNEFRMNGGVIDRAM 326
F++ +K Y N G++D+AM
Sbjct: 360 FYTFNVQIKAY----ANCGMLDKAM 380
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 87/214 (40%), Gaps = 3/214 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ +M + ++ ++ Y ++ + G ++ +F E R+ + P + +L
Sbjct: 242 FLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE--MRRHSILPDVVTL-SMLMG 298
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
SL K G+ E F M KG D Y ++ +A+ + +LF G+
Sbjct: 299 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 358
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D F + Y GM++K + + M++ + ++ + A++ +
Sbjct: 359 DFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 418
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
Q+I QG P + Y +I +C G+ K + +
Sbjct: 419 NQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQGI 452
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 1/240 (0%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
KL L P + + L + L K G+ + ++FF D + G Y ++I I E
Sbjct: 158 KLGLQPDAV-TFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGET 216
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A LFK+ EE G ++ + L+ ++ +V + L++ MK ++ +
Sbjct: 217 TAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSL 276
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ G R + A + ++ S +P T+ +++A C+ G S+A+ VF M + G
Sbjct: 277 IQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGV 336
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ VV YSS++ Y I +A +L M KGC+P+ + YN L+ + +AK + + ++
Sbjct: 337 EPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQ 396
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 129/320 (40%), Gaps = 38/320 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ +++ +++G Y I+ KIG++ A LF + E + Y IL
Sbjct: 185 VEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQ---PNVVTYNIL 241
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K E L F MK K I D Y SLI + K A L E +
Sbjct: 242 IDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNI 301
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ ++ F LV +EG V + V ++M + ++ G+S R A K
Sbjct: 302 MPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARK 361
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ +I++GC P +Y +I YC+ +A+++F EM +G V Y++++
Sbjct: 362 LFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLC 421
Query: 247 KTGRIRDAMRLVAKMKPKG-----------------------------------CEPNVW 271
+ GR+R+A L M G +P++
Sbjct: 422 QLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIA 481
Query: 272 IYNSLMDMHGRAKNLRQLEK 291
+YN L+D + NL+ K
Sbjct: 482 MYNILIDAMCKFGNLKDARK 501
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 128/272 (47%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + MK+ I D Y +++ ++ +AL E S L++ P+ + +L
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTS--LNIMPN-IFTFNVL 311
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D++ K G+ E F+ M E G+ D Y+SL+ ++ E+ A +LF KG
Sbjct: 312 VDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGC 371
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ Y + +++ ++ M + L + +++G + A
Sbjct: 372 KPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQD 431
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ + S G +P TY+ +++ +C+ G KA ++F MQ + Y+ ++
Sbjct: 432 LFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMC 491
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G ++DA +L +++ +G PNV IY ++++
Sbjct: 492 KFGNLKDARKLFSELFVQGLLPNVQIYTTIIN 523
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL K+ R E + F +M +G+ D Y +LI + ++ A++LFK
Sbjct: 378 YNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMH 437
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G L DL + L+ + +EG + K + M++ L + ++++ K
Sbjct: 438 SNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLK 497
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K++ +L QG +P Y +IIN C+ GL +A + F M+ G +Y+ ++
Sbjct: 498 DARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ + A +L+ +M+ +G
Sbjct: 558 RGFLQYKDESRAAQLIGEMRDRG 580
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%)
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L K+ E G+ D+ L+ + V+ V M L ++NG
Sbjct: 117 LSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLC 176
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K + AV+ ++ + GC P TY +IIN C+IG + A +F +M++ G VV
Sbjct: 177 KVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVV 236
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y+ ++ K + +A+ + + MK K P+++ YNSL+
Sbjct: 237 TYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLI 277
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 92/200 (46%)
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
++ + M+ G+ D + LI F+ + V +A +F + + G+ D F L+
Sbjct: 114 VISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLIN 173
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
+ G + +E + + + + I+NG K AA +++++ GC P
Sbjct: 174 GLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQP 233
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
VTY +I++ C+ L ++A +F M+ K + Y+S++ R ++A L+
Sbjct: 234 NVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALL 293
Query: 259 AKMKPKGCEPNVWIYNSLMD 278
+M PN++ +N L+D
Sbjct: 294 NEMTSLNIMPNIFTFNVLVD 313
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M S G + D Y +++ F K G K LF +S L MY IL D+
Sbjct: 433 FKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLK---PDIAMYNILIDA 489
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K G + K F ++ +G+L + +Y ++I + + A E F+ E G D
Sbjct: 490 MCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPD 549
Query: 130 ---LEVFLKLVLMYIEE 143
V ++ L Y +E
Sbjct: 550 EFSYNVIIRGFLQYKDE 566
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 108/219 (49%), Gaps = 4/219 (1%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T + +LCD G + L+ DM ++ ++ D ++Y +++ F + ++ A F
Sbjct: 330 TSVVALLCDK----GWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFD 385
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E + KG+ D + ++ +E+ ++++ M L++ + V+++G+ KR
Sbjct: 386 EMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRG 445
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A +++ ++ +G P VTY ++ + C+ G A ++ EM KG + Y+
Sbjct: 446 KMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYN 505
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
S++ K G + AMR +A M +P+V+ Y +L+D
Sbjct: 506 SLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLID 544
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 132/329 (40%), Gaps = 19/329 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L E M ++LD Y ++ F GD F E + + L + Y +
Sbjct: 346 LRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGL---ATDGVTYTTM 402
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L ++ E K ++M + + D Y LI + ++ A ++ ++G+
Sbjct: 403 INGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGV 462
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L ++G V+ E++ M N L ++ C ++NG K A++
Sbjct: 463 TPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMR 522
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + P TY ++I+A C+ G +A + EM KG +V Y+ ++ +
Sbjct: 523 TMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFC 582
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--------------- 291
+GR+ +L+ M K PN YNSLM + N++ +
Sbjct: 583 MSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNEN 642
Query: 292 -YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y +I + AR + F++E G
Sbjct: 643 TYNILIKGHCKARNMKEALYFHDEMIQKG 671
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 38/261 (14%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL +L +GR + + F +M D Y LI ++ E++ A +L E
Sbjct: 262 YNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMV 318
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ + V+ +V + ++G + L VVE M ++ + + + +++GF +
Sbjct: 319 AGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLV 378
Query: 183 AAVKVYEQLISQGC----------IPG-------------------------QVTYASII 207
+A + ++++ +G I G +VTY +I
Sbjct: 379 SARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLI 438
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
+ YC+ G ++A ++ M Q+G VV Y+++ K G ++ A L+ +M KG E
Sbjct: 439 DGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLE 498
Query: 268 PNVWIYNSLMDMHGRAKNLRQ 288
N YNSL++ +A L Q
Sbjct: 499 LNACTYNSLINGLCKAGYLEQ 519
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 118/277 (42%), Gaps = 3/277 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M G+ + Y + + K GD + L E ++ L+L + Y L +
Sbjct: 454 HNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACT---YNSLING 510
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G + ++ DM + D Y +LI + ++ A L +E +KG+
Sbjct: 511 LCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPT 570
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G VE ++++ M ++ + ++ + + ++Y+
Sbjct: 571 IVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYK 630
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ S+ P + TY +I +C+ +A EM QKGF +YS+++ + K
Sbjct: 631 GMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKK 690
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ +A L M+ +G +Y+ +D++ NL
Sbjct: 691 KFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNL 727
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M++ G++ D Y ++ + K G+ ++ AL L + R+ L P+ Y IL D
Sbjct: 360 FVEMRAMGLLPDVITYNSLLNGYCKAGNQKE--ALLLFGDLRRAGLAPTVL-TYNILIDG 416
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G E + +M E+G L D Y L+ ++ + + E F E KG+ D
Sbjct: 417 YCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPD 476
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + I G + K+ ++ E + ++ ++++G K A ++
Sbjct: 477 CFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMM 536
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+IS G P +TY +I+A+C G +A K F +M G V Y+ ++ Y + G
Sbjct: 537 QMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRG 596
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ A KM +G EPN YN L+
Sbjct: 597 NLYSAYGWFRKMLEEGVEPNEITYNVLI 624
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 103/234 (44%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+S+ Y L L G ++ +M+ +GI+ Y ++I +++ A+
Sbjct: 300 ASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAK 359
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F E G+L D+ + L+ Y + G ++ L + ++ A L + ++++G+ +
Sbjct: 360 FVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 419
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A ++ E+++ QGC+P TY ++ + + + F EM KG A
Sbjct: 420 LGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFA 479
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
Y++ + G I + +L + +G + YN L+D + NL+ E+
Sbjct: 480 YNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEE 533
>gi|449443502|ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
gi|449492820|ref|XP_004159111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
Length = 704
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 160/365 (43%), Gaps = 33/365 (9%)
Query: 1 TNSQSKL---HYYEKM-KSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--- 53
+NSQ+ L Y++ M KS+ + Y ++ F K D E LF E +R +
Sbjct: 157 SNSQTALLALRYFQDMLKSSKQTI---FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPD 213
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
++T S+ LC K+ +++F M D Y+++I ++ V +
Sbjct: 214 NVTFSTIISCARLCSLPSKA------VEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDM 267
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A L+ A + D F ++ ++ G + L V E MK + + I +++
Sbjct: 268 AFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLD 327
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+ + W +Y+++I G P TYAS++ AY R A V+ EM++KG
Sbjct: 328 AMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQL 387
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG-CEPNVWIYNSLMDMHGRAKNLRQLEK- 291
V+ Y++++AM G + +A+ + MK G C P+ W ++S++ ++ + + E+
Sbjct: 388 NVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEM 447
Query: 292 ---------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
T++I Y A+ D V+ +N+ G D G ++ V ++
Sbjct: 448 LNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQ 507
Query: 337 LSQIE 341
+ E
Sbjct: 508 TPKGE 512
>gi|295831073|gb|ADG39205.1| AT5G42310-like protein [Capsella grandiflora]
gi|295831075|gb|ADG39206.1| AT5G42310-like protein [Capsella grandiflora]
gi|295831079|gb|ADG39208.1| AT5G42310-like protein [Capsella grandiflora]
gi|295831083|gb|ADG39210.1| AT5G42310-like protein [Capsella grandiflora]
gi|345293535|gb|AEN83259.1| AT5G42310-like protein, partial [Capsella rubella]
gi|345293537|gb|AEN83260.1| AT5G42310-like protein, partial [Capsella rubella]
gi|345293539|gb|AEN83261.1| AT5G42310-like protein, partial [Capsella rubella]
gi|345293541|gb|AEN83262.1| AT5G42310-like protein, partial [Capsella rubella]
gi|345293543|gb|AEN83263.1| AT5G42310-like protein, partial [Capsella rubella]
gi|345293545|gb|AEN83264.1| AT5G42310-like protein, partial [Capsella rubella]
Length = 185
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 95/170 (55%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A + KE E + + VF +L+ Y + G +KT +V++ MK+ + V+++
Sbjct: 4 ARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 63
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
F K A+ +++++S+G P +VT+ ++I+ +C+ G + AE +F M+++G
Sbjct: 64 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRGCLP 123
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
C Y+ M+ YG R D RL+ KMK +G PNV + +L+D++G++
Sbjct: 124 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 173
>gi|255580313|ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529437|gb|EEF31397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 753
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 2/241 (0%)
Query: 37 DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
+SE F E L THM KI+ + LG++ + DM +KG+ D
Sbjct: 121 NSEHALQFFRWVERAGLFKNDRDTHM-KII-EILGRASKLNHARCILLDMPKKGVEWDEY 178
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
++ LI S+ V+ A ++F + E G+ R ++ + L + + G V M
Sbjct: 179 MFVVLIESYGKAGIVQEAVKIFNKMNELGVERSIKSYDALFKVILRRGRYMMAKRVFNKM 238
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
N + + +++ GF A++ Y+ + ++G P VTY ++IN + R
Sbjct: 239 LNDGIQPTRHTYNIMLWGFFLSLRLETAMRFYDDMKNRGISPDVVTYNTMINGFYRFKKM 298
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+AEK+F+EM+ K V++Y++M+ Y R+ D +RL+ +MK +PNV Y++L
Sbjct: 299 EEAEKLFVEMKGKNIAPTVISYTTMIKGYVAVDRVDDGLRLLEEMKSFNIKPNVHTYSTL 358
Query: 277 M 277
+
Sbjct: 359 L 359
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/332 (18%), Positives = 135/332 (40%), Gaps = 21/332 (6%)
Query: 2 NSQSKLHYYEKMKSAGIVL-DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
NS+ L ++ ++ AG+ D + +I+E + + L+ + ++
Sbjct: 121 NSEHALQFFRWVERAGLFKNDRDTHMKIIEILGRASKLNHARCILLDMPKKGVEW---DE 177
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+M+ +L +S GK+G E +K F M E G+ Y +L +A+ +F +
Sbjct: 178 YMFVVLIESYGKAGIVQEAVKIFNKMNELGVERSIKSYDALFKVILRRGRYMMAKRVFNK 237
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G+ + ++ + +E + + MKN ++ ++NGF + +
Sbjct: 238 MLNDGIQPTRHTYNIMLWGFFLSLRLETAMRFYDDMKNRGISPDVVTYNTMINGFYRFKK 297
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A K++ ++ + P ++Y ++I Y + ++ EM+ V YS+
Sbjct: 298 MEEAEKLFVEMKGKNIAPTVISYTTMIKGYVAVDRVDDGLRLLEEMKSFNIKPNVHTYST 357
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEP-NVWIYNSLMDMHGRAKNLRQLE--------- 290
++ ++ +A ++ +M + P + I+ L+ +A +LR E
Sbjct: 358 LLPGLCDAWKMTEAKDILIEMVARHLAPKDNSIFLRLLSCQCKAGDLRAAEDVLNTMMRL 417
Query: 291 -------KYTTVISAYNMAREFDMCVKFYNEF 315
Y +I + A E+D VK+ ++
Sbjct: 418 HIPTEAGHYGVLIENFCKAEEYDRAVKYLDKL 449
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 114 AEELFKEAEEKGMLR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
A + F+ E G+ + D + +K++ + + ++ M + + + V++
Sbjct: 125 ALQFFRWVERAGLFKNDRDTHMKIIEILGRASKLNHARCILLDMPKKGVEWDEYMFVVLI 184
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+ K AVK++ ++ G +Y ++ R G Y A++VF +M G
Sbjct: 185 ESYGKAGIVQEAVKIFNKMNELGVERSIKSYDALFKVILRRGRYMMAKRVFNKMLNDGIQ 244
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK- 291
Y+ M+ + + R+ AMR MK +G P+V YN++++ R K + + EK
Sbjct: 245 PTRHTYNIMLWGFFLSLRLETAMRFYDDMKNRGISPDVVTYNTMINGFYRFKKMEEAEKL 304
Query: 292 ---------------YTTVISAYNMAREFDMCVKFYNEFR 316
YTT+I Y D ++ E +
Sbjct: 305 FVEMKGKNIAPTVISYTTMIKGYVAVDRVDDGLRLLEEMK 344
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 114/251 (45%), Gaps = 19/251 (7%)
Query: 18 IVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST---------HMYKILCD 68
I ++G Y ++E F K + ++ + +++ L P ST M + LC
Sbjct: 419 IPTEAGHYGVLIENFCKAEEYDRAVKYLDKLIEKEIILRPQSTLEIESNAYNPMIQYLC- 477
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
S G++G+A EI FFR + +KG+ +DP + +LIC A A E+FK ++G+ R
Sbjct: 478 SHGQTGKA-EI--FFRQLMKKGV-QDPLAFNNLICGHAKEGYPDSAFEIFKIMGKRGVPR 533
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D + + ++ Y+ +G ++ M ++ + V+ + F R A+ +V
Sbjct: 534 DADAYRLIIESYLRKGEPADAKTALDGMLEDGHVPDPSVFRSVMESLFEDGRVQTAS-RV 592
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ ++ +G I+ A G +A + Q GF V + ++++ +
Sbjct: 593 MKSMVEKGVKENMDLVGKILEALLMRGHVEEALGRIELLMQSGFH---VNFDDLLSVLSE 649
Query: 248 TGRIRDAMRLV 258
G+ A++L+
Sbjct: 650 KGKTIAALKLL 660
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 80/176 (45%), Gaps = 7/176 (3%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y+++ +S + G + M E G + DPSV+ S++ S V+ A
Sbjct: 532 PRDADAYRLIIESYLRKGEPADAKTALDGMLEDGHVPDPSVFRSVMESLFEDGRVQTASR 591
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDCISCVIVNG 174
+ K EKG+ ++++ K++ + G VE+ L +E + + +N D +S +
Sbjct: 592 VMKSMVEKGVKENMDLVGKILEALLMRGHVEEALGRIELLMQSGFHVNFDDLLSVL---- 647
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
S++ AA+K+ + + + +Y +++A G A + ++ QKG
Sbjct: 648 -SEKGKTIAALKLLDFALERDFNLDFKSYDKVLDALLAAGKTLNAYSILCKIMQKG 702
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 61/140 (43%), Gaps = 19/140 (13%)
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
+ +I +Y + G+ +A K+F +M + G ++ + +Y ++ + + GR A R+ KM
Sbjct: 180 FVVLIESYGKAGIVQEAVKIFNKMNELGVERSIKSYDALFKVILRRGRYMMAKRVFNKML 239
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVI 322
G +P YN ++ + ++ + ++FY++ + G
Sbjct: 240 NDGIQPTRHTYN-------------------IMLWGFFLSLRLETAMRFYDDMKNRGISP 280
Query: 323 DRAMAGIMVGVFSKLSQIEE 342
D M+ F + ++EE
Sbjct: 281 DVVTYNTMINGFYRFKKMEE 300
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 147/334 (44%), Gaps = 34/334 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSST--HMYKI 65
+++M+ + D Y ++ +F K G + + + E ++ DL S + +
Sbjct: 180 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 239
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
LCD +A I F +K GI D Y S+I + K A L KE E G
Sbjct: 240 LCDY----SKAISI---FSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAG 292
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK--NAELNISDCISCVIVNGFSKRRAYWA 183
+ + + L+ +Y+E + L V MK N L+++ C ++++ + +
Sbjct: 293 VSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTC--NIMIDVYGQLDMVKE 350
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +++ L P V+Y +I+ Y L+ +A +F MQ+K ++ VV Y++M+
Sbjct: 351 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 410
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
+YGKT A LV +M+ +G EPN Y+T+IS + A
Sbjct: 411 IYGKTMEHEKATNLVQEMQSRGIEPNAIT-------------------YSTIISIWGKAG 451
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
+ D + + R +G ID+ + M+ + ++
Sbjct: 452 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 485
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 127/291 (43%), Gaps = 36/291 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+H + M+ I + Y +++ + K + EK L E +SR ++ P++ Y +
Sbjct: 387 IHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE--PNAI-TYSTI 443
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA----------EVKVAEE 116
GK+G+ F+ ++ G+ D +Y ++I ++ + E+K+ +
Sbjct: 444 ISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDN 503
Query: 117 L---------------------FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
+ F++A E G ++D+ VF ++ +Y +EV E
Sbjct: 504 IPRETAITILAKAGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEK 563
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIG 214
M+ A +++N + K+R + A VY ++ +GC+ P +V + +++ Y
Sbjct: 564 MRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHF-QMLSLYSSKK 622
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+ E +F ++ + + A+Y + ++ DA R++ +M+ +G
Sbjct: 623 DFEMVESLFERLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERG 673
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/354 (17%), Positives = 151/354 (42%), Gaps = 33/354 (9%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC-----ESRKLDLTPSSTHMYK 64
+ ++K +GI D Y ++ + K A LF E E + ++P++ Y
Sbjct: 250 FSRLKRSGITPDLVAYNSMINVYGK-------AKLFKEARVLIKEMNEAGVSPNTVS-YS 301
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L ++ + E L F +MKE D + +I + + VK A+ LF +
Sbjct: 302 TLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 361
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ ++ + ++ +Y E + + + + M+ ++ + ++ + K + A
Sbjct: 362 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 421
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ +++ S+G P +TY++II+ + + G +A +F +++ G + V Y +M+
Sbjct: 422 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 481
Query: 245 YGKTGRIRDAMRLVAKMK-----PK-----------GCEPNVWIYNSLMDMHGRAKNLRQ 288
Y + G + A RL+ ++K P+ E W++ + + ++
Sbjct: 482 YERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGSTEEATWVFRQAFE----SGEVKD 537
Query: 289 LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ + +I+ Y+ + + ++ + + R G D +++ + K + E+
Sbjct: 538 ISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEK 591
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 91/189 (48%), Gaps = 16/189 (8%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V++ + + + A +++++ + P + TY+++I ++ + G++ A +M+Q
Sbjct: 162 VVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD 221
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+V YS+++ + + A+ + +++K G P++ YNS+++++G+AK ++
Sbjct: 222 RVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEA 281
Query: 290 E----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
Y+T++S Y +F + + E + +D IM+ V
Sbjct: 282 RVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDV 341
Query: 334 FSKLSQIEE 342
+ +L ++E
Sbjct: 342 YGQLDMVKE 350
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/228 (17%), Positives = 95/228 (41%), Gaps = 4/228 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + GK+ + ++M+ +GI + Y+++I + ++ A LF++
Sbjct: 405 YNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLR 464
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D ++ +++ Y G++ ++ +K + + ++ S A W
Sbjct: 465 SSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGSTEEATW 524
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
V+ Q G + + +IN Y R Y +VF +M+ G+ A + ++
Sbjct: 525 ----VFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVL 580
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
YGK A + +M+ +GC ++ ++ ++ K+ +E
Sbjct: 581 NAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVE 628
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 3/275 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L Y ++M G+ + Y ++ A + G + L E + L Y
Sbjct: 603 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLA---PDVFTY 659
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL + K G + L+ F +M +G+ Y +LI + + +V+ ++LF EA
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ DL ++ L+ + G +++ E++ M+ + D ++ G
Sbjct: 720 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 779
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K+ +++ +G P VTY ++I+ Y G A ++ EM KGF+ ++ Y++++
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 839
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G+ DA +V +M G P+ Y SL++
Sbjct: 840 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 874
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 140/313 (44%), Gaps = 36/313 (11%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDL-TPSSTHMY 63
+ L Y +MKS + + + ++ A S ALF + +L L T + M
Sbjct: 435 TSLRLYSRMKSLSLPISTASLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIML 490
Query: 64 KILCDSLGKSGRAFEILK----------------------------FFRDMKEKG-ILED 94
+ LC S GK RA E+L+ R+M+E+G I +
Sbjct: 491 RHLC-SAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPN 549
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV-FLKLVLMYIEEGMVEKTLEVV 153
Y ++I + + V A ++F E KG ++ V + L+ Y ++G ++ L
Sbjct: 550 QYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR 609
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ M + ++ ++V+ A ++ E++ +G P TY +IN +C+
Sbjct: 610 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 669
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G KA ++F M ++G VV Y++++ K G++++ +L + +G P++ +Y
Sbjct: 670 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 729
Query: 274 NSLMDMHGRAKNL 286
N+L++ H + N+
Sbjct: 730 NALINSHSTSGNI 742
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 23/318 (7%)
Query: 4 QSKLHYYEKMKS-AGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
Q+ L +M+ GI + Y ++ + K+G ++ +F E + K ++ P + M
Sbjct: 531 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKPEAV-M 588
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L G+ L + M E+G+ + Y L+ + A EL +E
Sbjct: 589 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 648
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + L+ + +EG V+K LE+ E+M + + ++ SK+
Sbjct: 649 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 708
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
K++++ + +G P V Y ++IN++ G +A ++ EM++K V Y++++
Sbjct: 709 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 768
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
GR+ +A +L+ +M +G +P++ YN T+IS Y+M
Sbjct: 769 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYN-------------------TLISGYSMK 809
Query: 303 REFDMCVKFYNEFRMNGG 320
+ ++ NE MN G
Sbjct: 810 GDVKDALRIRNEM-MNKG 826
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 75/212 (35%), Gaps = 42/212 (19%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSS 59
N + L +E M G+ Y ++ A K G ++ LF E R + DL
Sbjct: 671 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV--- 727
Query: 60 THMYKILCDSLGKSG---RAFEIL--------------------------------KFFR 84
+Y L +S SG RAFEI+ K
Sbjct: 728 --LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 785
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M E+GI D Y +LI ++ +VK A + E KG L + L+ + G
Sbjct: 786 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 845
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ +V+ M + D ++ G +
Sbjct: 846 QGDDAENMVKEMVENGITPDDSTYISLIEGLT 877
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 162/388 (41%), Gaps = 69/388 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ +M + G D+ Y ++ + K G D+ ++A F S +Y L
Sbjct: 202 FVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----------KPSVPVYNAL 250
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEK 124
D + K GR +K +M + G+ DP+V Y+ +I S V++A LF + +
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGV--DPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308
Query: 125 GMLRDLEVFLKLV-----------------LMYIE------------------EGMVEKT 149
G ++ F L+ LM + G +E+
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368
Query: 150 LEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
L+V + M+ + + ++++GF+K A + + ++IS GC P VTY +++
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
C+ ++ +A + +M +G + +++ + GR+ AM+L+ +M+ GC PN
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488
Query: 270 VWIYNSLMDMHGR---------------AKNLR-QLEKYTTVISAYNMAREFDMCVKFYN 313
+ YN L+D R A+NL+ L Y TV+ ++ A ++ +
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG 548
Query: 314 EFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ + G D M+ + K +++
Sbjct: 549 KALVRGTAPDSITYNTMIHAYCKQGKVK 576
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 127/311 (40%), Gaps = 43/311 (13%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++MK GI + I+ + ++G +E+ +F + P+ +Y L D+L
Sbjct: 98 QQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIG--EFGCKPT-VRIYNHLLDAL 154
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ I + +MK+ G++ + Y L+ + V A +LF E KG D
Sbjct: 155 LSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDA 214
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V + G ++ E+ K S + +++G K A+K+ +
Sbjct: 215 VTYTTMVSSLCKAGKIDDARELAGRFKP-----SVPVYNALIDGMCKEGRIEVAIKLLGE 269
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM------------------------ 226
++ G P V+Y+ IIN+ C G A +F +M
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK 329
Query: 227 -----------QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
Q G + VVAY++++ G + +A+++ +M+ GC PNV Y+
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389
Query: 276 LMDMHGRAKNL 286
L+D ++ +L
Sbjct: 390 LIDGFAKSGDL 400
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 100/220 (45%), Gaps = 5/220 (2%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ Y+++ + LG+ + + MK GI ++ +I + + + A ++F
Sbjct: 73 TASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF 132
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E G + ++ L+ + E + + +MK L + +++ K
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKN 192
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
AA K++ ++ ++GC P VTY +++++ C+ G A ++ F V Y
Sbjct: 193 DRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVY 247
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++++ K GRI A++L+ +M G +PNV Y+ +++
Sbjct: 248 NALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 6/201 (2%)
Query: 79 ILKFFRDMKEKGILEDP-SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
+L FF + + S Y +I E+ + + + ++ + G+ ++F+ ++
Sbjct: 57 VLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICII 116
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
Y G E+ L++ + + I +++ + +Y + G I
Sbjct: 117 NGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLI 176
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P TY ++ A C+ A K+F+EM KG V Y++MV+ K G+I DA L
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236
Query: 258 VAKMKPKGCEPNVWIYNSLMD 278
+ K P+V +YN+L+D
Sbjct: 237 AGRFK-----PSVPVYNALID 252
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILCD 68
E+M+ G + + Y ++++A +++ E+ LF E E+R L +L +T +Y
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY----- 532
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE-KGML 127
++G E L+ F +G D Y ++I ++ +VK+A +L + K
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWH 592
Query: 128 RDLEVFLKLV-----LMYIEEGM 145
D+ + L+ M IEE M
Sbjct: 593 PDIITYTSLIWGACNWMNIEEAM 615
>gi|255661024|gb|ACU25681.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 376
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
Y++M + D+ Y ++ F++ S+++ F + R+ T +S + I+
Sbjct: 13 YKEMVERKVSPDAVVYNTMLNGFFR---SQRIKDCFELWDLMGREGSRTVAS---FNIIM 66
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
L +G+ E + + MKE G +ED + Y L+ F + + + AE+KG +
Sbjct: 67 RGLFDNGKVDEAVSIWELMKESGFVEDSTTYGILVHGFCKNGHNNKSLHVLEIAEQKGGV 126
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D + ++ +E ++K + V+ SM N + + ++NG Y A+
Sbjct: 127 LDAFAYSAMINGLCKEAKLDKAISVLNSMTNNGCKPNAHVYNSLINGLVGASKYEDAICA 186
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++++ + C P VTY +IN C+ Y++A + +M +KGF+ V+ YSS+ +
Sbjct: 187 FQEMGNMDCSPTIVTYNXLINGLCKGERYAEAYDLVKQMLEKGFNPSVITYSSLFKGLCQ 246
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ A++L K+ KG +P+V ++N L +HG
Sbjct: 247 GRKVEMALQLWKKVISKGFKPDVQMHNIL--IHG 278
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 19/205 (9%)
Query: 108 IAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN------AEL 161
+ ++ AE ++KE E+ + D V+ ++ + ++ E+ + M A
Sbjct: 3 LGDISGAERVYKEMVERKVSPDAVVYNTMLNGFFRSQRIKDCFELWDLMGREGSRTVASF 62
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
NI I+ G AV ++E + G + TY +++ +C+ G +K+
Sbjct: 63 NI-------IMRGLFDNGKVDEAVSIWELMKESGFVEDSTTYGILVHGFCKNGHNNKSLH 115
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
V +QKG AYS+M+ K ++ A+ ++ M GC+PN +YNSL++
Sbjct: 116 VLEIAEQKGGVLDAFAYSAMINGLCKEAKLDKAISVLNSMTNNGCKPNAHVYNSLIN--- 172
Query: 282 RAKNLRQLEKYTTVISAYNMAREFD 306
L KY I A+ D
Sbjct: 173 ---GLVGASKYEDAICAFQEMGNMD 194
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 114/277 (41%), Gaps = 17/277 (6%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ +++M E+ + D VY +++ F +K EL+ +G R + F ++
Sbjct: 11 RVYKEMVERKVSPDAVVYNTMLNGFFRSQRIKDCFELWDLMGREGS-RTVASFNIIMRGL 69
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G V++ + + E MK + ++V+GF K ++ V E +G +
Sbjct: 70 FDNGKVDEAVSIWELMKESGFVEDSTTYGILVHGFCKNGHNNKSLHVLEIAEQKGGVLDA 129
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
Y+++IN C+ KA V M G Y+S++ + DA+ +
Sbjct: 130 FAYSAMINGLCKEAKLDKAISVLNSMTNNGCKPNAHVYNSLINGLVGASKYEDAICAFQE 189
Query: 261 MKPKGCEPNVWIYNSLMD------MHGRAKNL--RQLEK--------YTTVISAYNMARE 304
M C P + YN L++ + A +L + LEK Y+++ R+
Sbjct: 190 MGNMDCSPTIVTYNXLINGLCKGERYAEAYDLVKQMLEKGFNPSVITYSSLFKGLCQGRK 249
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+M ++ + + G D M I++ + +IE
Sbjct: 250 VEMALQLWKKVISKGFKPDVQMHNILIHGLCNVGKIE 286
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 111/265 (41%), Gaps = 3/265 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E MK +G V DS Y ++ F K G + K + LE +K + + Y + +
Sbjct: 82 WELMKESGFVEDSTTYGILVHGFCKNGHNNK-SLHVLEIAEQKGGVLDA--FAYSAMING 138
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K + + + M G + VY SLI ++ + A F+E
Sbjct: 139 LCKEAKLDKAISVLNSMTNNGCKPNAHVYNSLINGLVGASKYEDAICAFQEMGNMDCSPT 198
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + ++V+ M N S + G + R A+++++
Sbjct: 199 IVTYNXLINGLCKGERYAEAYDLVKQMLEKGFNPSVITYSSLFKGLCQGRKVEMALQLWK 258
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++IS+G P + +I+ C +G A ++ M + +V ++++ + K G
Sbjct: 259 KVISKGFKPDVQMHNILIHGLCNVGKIELALALYFGMNRWKCSPNLVTLNTLMEGFYKDG 318
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYN 274
+R + + A++ +P++ YN
Sbjct: 319 DVRSGLVIWARILRNELKPDIISYN 343
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 5/173 (2%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFA 106
E +D +P+ Y L + L K R E + M EKG +PSV Y+SL
Sbjct: 189 EMGNMDCSPTIV-TYNXLINGLCKGERYAEAYDLVKQMLEKGF--NPSVITYSSLFKGLC 245
Query: 107 SIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC 166
+V++A +L+K+ KG D+++ L+ G +E L + M + + +
Sbjct: 246 QGRKVEMALQLWKKVISKGFKPDVQMHNILIHGLCNVGKIELALALYFGMNRWKCSPNLV 305
Query: 167 ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
++ GF K + + ++ +++ P ++Y + C S A
Sbjct: 306 TLNTLMEGFYKDGDVRSGLVIWARILRNELKPDIISYNITLKGLCSCNRISGA 358
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 121/250 (48%), Gaps = 2/250 (0%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+ + +SE F E L TH+ KI+ + LG++ + DM
Sbjct: 15 VYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHL-KII-EILGRASKLNHARCILLDMP 72
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+KG+ D ++ +I S+ V+ + ++F++ EE G+ R ++ + L + + G
Sbjct: 73 KKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYM 132
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
M + + + V++ GF A + +E + S+ +P VTY +++
Sbjct: 133 MAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMV 192
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N YCR+ +AEK F+EM+ + + VV Y++++ Y R+ DA+RLV +MK G +
Sbjct: 193 NGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFGMK 252
Query: 268 PNVWIYNSLM 277
PN Y++L+
Sbjct: 253 PNAITYSTLL 262
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/259 (18%), Positives = 106/259 (40%), Gaps = 4/259 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + ++KM+ G+ Y + + + G F + S ++ T H +
Sbjct: 97 QESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPT---RHTF 153
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ SG+ +FF DMK + I+ D Y +++ + + +++ AE+ F E +
Sbjct: 154 NVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKG 213
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + + + L+ Y+ V+ L +VE MK + + ++ G
Sbjct: 214 RNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFGMKPNAITYSTLLPGLCNAEKMSE 273
Query: 184 AVKVYEQLISQGCIPGQVT-YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + ++++ + P + + +I+ C+ G A V M + Y ++
Sbjct: 274 ARSILKEMVEKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLI 333
Query: 243 AMYGKTGRIRDAMRLVAKM 261
Y K G A++L+ K+
Sbjct: 334 ENYCKAGEYDKAIKLLDKV 352
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 93/209 (44%), Gaps = 2/209 (0%)
Query: 95 PSVYASLICS-FASIAEVKVAEELFKEAEEKGML-RDLEVFLKLVLMYIEEGMVEKTLEV 152
PS+ L+ + S + A + F+ E + + E LK++ + + +
Sbjct: 8 PSIDHELVYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCI 67
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ M L + + ++++ + K +VK+++++ G +Y ++ R
Sbjct: 68 LLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILR 127
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
G Y A++ F +M +G + ++ M+ + +G++ A R MK + P+V
Sbjct: 128 RGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVT 187
Query: 273 YNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
YN++++ + R K + + EKY + N+
Sbjct: 188 YNTMVNGYCRVKKMEEAEKYFVEMKGRNI 216
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 113/239 (47%), Gaps = 1/239 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y + LG++ + I K +M G + Y LI S+ + A +F
Sbjct: 380 HTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDR 439
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G D + L+ ++ + G ++ L + + M+ A L+ VI+N K
Sbjct: 440 MQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGH 499
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+A K++ +++ QGC+P VTY +I + Y A +++ +MQ GF V YS
Sbjct: 500 LTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSI 559
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLEKYTTVISA 298
++ + G G + +A + +MK K P+ +Y L+D+ G+ N+ + E Y +++A
Sbjct: 560 VMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNA 618
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 109/264 (41%), Gaps = 20/264 (7%)
Query: 80 LKFFRDMK-EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
L FF +K + G D Y +++ + +L E G ++ + +L+
Sbjct: 363 LGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIH 422
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
Y + + + V + M+ A C +++ +K A+ +Y+++ P
Sbjct: 423 SYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSP 482
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
TY+ IIN + G + A K+F EM +G +V Y+ M+A+ K A+ L
Sbjct: 483 DTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELY 542
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMN 318
M+ G +P+ Y+ +M++ G +L + E + E +
Sbjct: 543 RDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAE-------------------AIFTEMKRK 583
Query: 319 GGVIDRAMAGIMVGVFSKLSQIEE 342
V D + G++V ++ K+ +E+
Sbjct: 584 NWVPDEPVYGLLVDLWGKVGNVEK 607
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 7/204 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH Y+KM+ A + D+ Y I+ K G LF CE P+ Y I+
Sbjct: 469 LHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLF--CEMVDQGCVPNLV-TYNIM 525
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
K+ L+ +RDM+ G D Y+ ++ ++ AE +F E + K
Sbjct: 526 IALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNW 585
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCVIVNGFSKRRAYWAA 184
+ D V+ LV ++ + G VEK+ E ++M NA L N+ C S +++ F + A
Sbjct: 586 VPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNS--LLSAFLRVHRLSDA 643
Query: 185 VKVYEQLISQGCIPGQVTYASIIN 208
+ + ++ G P TY +++
Sbjct: 644 YNLLQSMLRLGLQPSLQTYTLLLS 667
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 106/234 (45%), Gaps = 3/234 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M+ AG D YC +++ K G + AL + + ++ L+P T Y ++ +
Sbjct: 437 FDRMQEAGCQPDRVTYCTLIDIHAKAGFLD--VALHMYQKMQEAHLSPD-TFTYSVIINC 493
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LGK+G K F +M ++G + + Y +I A A EL+++ + G D
Sbjct: 494 LGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPD 553
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + G +E+ + MK + + ++V+ + K + + Y+
Sbjct: 554 KVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQ 613
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+++ G P T S+++A+ R+ S A + M + G + Y+ +++
Sbjct: 614 AMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLS 667
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + L Y M++AG D Y +ME G E+ A+F E ++ + P
Sbjct: 534 NYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEM--KRKNWVPDEP- 590
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D GK G + ++++ M G+ + SL+ +F + + A L +
Sbjct: 591 VYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSM 650
Query: 122 EEKGMLRDLEVFLKLV 137
G+ L+ + L+
Sbjct: 651 LRLGLQPSLQTYTLLL 666
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 3/275 (1%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G V D YC ++ GD E+ LF E +++ DL P +Y L L + G
Sbjct: 345 GFVPDRVTYCSLINGLCAEGDIERALELFNEAQAK--DLKPDLV-VYNSLVKGLCRQGLI 401
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
L+ +M E+G D Y +I + + A + +A KG L D+ F L
Sbjct: 402 LHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTL 461
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ Y + ++ L++VE M + ++NG K + +E++I +GC
Sbjct: 462 IDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGC 521
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P +TY +I +C+I +A V + M Q G V++++++ + + G + A
Sbjct: 522 RPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYL 581
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
L K+ KG +N L+ + N++ EK
Sbjct: 582 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 616
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 3/229 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L K + E ++ M +G + D Y ++I + ++ A EL K+A
Sbjct: 283 YNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAV 342
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + D + L+ EG +E+ LE+ + +L + +V G ++
Sbjct: 343 FKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLIL 402
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++V +++ +GC P TY IIN C++G S A V + KG+ V +++++
Sbjct: 403 HALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLI 462
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQ 288
Y K ++ A++LV +M G P+V YNS+++ G+AK + +
Sbjct: 463 DGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE 511
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 125/304 (41%), Gaps = 39/304 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M +AG+ D+ + +++F G L R D P++ Y +
Sbjct: 129 YVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAA---YCTVVRG 185
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L G + F +M + + D + + +++ + +V + L + ++GM +
Sbjct: 186 LYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSAN 245
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ E+G +E+ + +VE M A + ++ G K A +
Sbjct: 246 KFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLG 304
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKV--------------------------- 222
++++QGCIP TY +II+ YC+ G+ +A ++
Sbjct: 305 RMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEG 364
Query: 223 --------FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
F E Q K +V Y+S+V + G I A++++ +M +GC P++W YN
Sbjct: 365 DIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYN 424
Query: 275 SLMD 278
+++
Sbjct: 425 IIIN 428
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + L K+G+A E+ + F +M KG + Y LI +F I +++ A +
Sbjct: 493 YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMC 552
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G++ D F L+ + G ++ + + + + + +++ +S +
Sbjct: 553 QDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQ 612
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K++ ++IS+G P TY +++ C+ +A EM KGF + + M+
Sbjct: 613 MAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRML 672
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ R+ +A+ ++ M G P V
Sbjct: 673 NLLAMNHRVSEAVAIIHIMVRMGVVPEV 700
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ +++ AAV +E++ C P Y +I++A + +A KV++ M G
Sbjct: 78 IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQ 288
++ + + TGR A+RL+ + +GC+ Y +++ HG N R
Sbjct: 138 APDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARH 197
Query: 289 L 289
L
Sbjct: 198 L 198
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 41/274 (14%), Positives = 106/274 (38%), Gaps = 35/274 (12%)
Query: 50 SRKLDLTPSSTH-MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
S + L P S +Y + ++GR + F M Y +++ + +
Sbjct: 60 SARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNA 119
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
A A +++ G+ D + + G L ++ S+ +
Sbjct: 120 AYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAY 179
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
C +V G + A ++++++ + P T+ ++++A C+ G ++ + ++ +
Sbjct: 180 CTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLK 239
Query: 229 KGFD----KC------------------------------VVAYSSMVAMYGKTGRIRDA 254
+G C VV Y++++ K ++++A
Sbjct: 240 RGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEA 299
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ + +M +GC P+ + YN+++D + ++ L++
Sbjct: 300 AQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQE 333
>gi|297804554|ref|XP_002870161.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
lyrata]
gi|297315997|gb|EFH46420.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
lyrata]
Length = 702
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 147/334 (44%), Gaps = 20/334 (5%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ F K + EK LF E R + ++T I C +SG +++F
Sbjct: 178 YNVTLKVFRKSKNLEKSEKLFDEMLERGVK-PDNATFTTIISCAR--QSGVPKRAVEWFE 234
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M G D A++I ++ V++A L+ A + D F L+ +Y G
Sbjct: 235 KMSSFGCEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ L + E MK + + I +++ + + W A +++ LIS G P TYA
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLLDSMGRAKRPWQAKIIHKDLISNGFTPNWSTYA 354
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP- 263
++I AY R A ++ EM++KG V+ Y+++++M G + +A + MK
Sbjct: 355 ALIRAYGRARYGDDALVIYREMKEKGLSLTVILYNTLLSMCADIGYVDEAFEIFQDMKNC 414
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDM 307
+ C+P+ W ++SL+ ++ + + + E T+VI Y A++ D
Sbjct: 415 ETCDPDSWTFSSLITVYSCSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDD 474
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
V+ +++ G D G ++ V ++ E
Sbjct: 475 VVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEE 508
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 139/316 (43%), Gaps = 40/316 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++K+ + G L+ Y ++ K+G + L + + L + MY +
Sbjct: 162 LQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGK---LVQPNVVMYNTI 218
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF-------- 118
DS+ K E + +M KGI D Y +LI F + ++K A +LF
Sbjct: 219 IDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENI 278
Query: 119 --------------------KEAE-------EKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
KEA+ ++G+ D+ + L+ Y V K
Sbjct: 279 NPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKH 338
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+ ++ +N + ++++GF K + A+ +++++ IP VTY S+I+ C
Sbjct: 339 IFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLC 398
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
++G S A K+ EM +G + Y+S++ K ++ A+ L+ KMK +G +P++
Sbjct: 399 KLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDIC 458
Query: 272 IYNSLMDMHGRAKNLR 287
Y +L+D G KN R
Sbjct: 459 TYTTLVD--GLCKNGR 472
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 137/302 (45%), Gaps = 17/302 (5%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
PS KIL SL KS ++ R M+ GI D + + LI F+ + + ++
Sbjct: 70 PSIFQFGKIL-GSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ + + G ++ L+ +G + + L+ + + +++ ++NG
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K AA+++ ++ + P V Y +II++ C++ L ++A ++ EM KG VV
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
Y+++++ + G+++DA L KM + PNV+ +N L+D + + L++ +
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y +++ Y + +E + +N G + IM+ F K+ ++
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368
Query: 341 EE 342
+E
Sbjct: 369 DE 370
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 126/300 (42%), Gaps = 40/300 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M S GI D Y ++ F +G + LF + ++ + + + IL D
Sbjct: 235 YSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENIN---PNVYTFNILVDG 291
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K R E M ++GI D Y SL+ + + EV A+ +F ++G+ +
Sbjct: 292 FCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPN 351
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY 188
+ + ++ + + V++ + + + M + I D ++ +++G K A+K+
Sbjct: 352 IHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNI-IPDVVTYNSLIDGLCKLGKISYALKLV 410
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ +G ++TY SI++A C+ KA + +M+ +G + Y+++V K
Sbjct: 411 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKN 470
Query: 249 GRIRDA-----------------------------------MRLVAKMKPKGCEPNVWIY 273
GR+ DA + L++KM+ GC PN Y
Sbjct: 471 GRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTY 530
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 107/253 (42%), Gaps = 3/253 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M GI D Y +M+ + + + K +F R ++ + H Y I+ K
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN---PNIHSYSIMIHGFCK 364
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ E + F++M I+ D Y SLI + ++ A +L E ++G+ D
Sbjct: 365 IKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKIT 424
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ + V+K + ++ MK+ + C +V+G K A V+E L+
Sbjct: 425 YNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLL 484
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G I Y ++I +C GL+ ++ + +M++ G V Y ++
Sbjct: 485 VKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDEND 544
Query: 253 DAMRLVAKMKPKG 265
A +L+ +M +G
Sbjct: 545 KAEKLLREMITRG 557
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 131/307 (42%), Gaps = 14/307 (4%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E R TP+ Y ++ + + + GR + +F + G D Y +++ +
Sbjct: 205 EMRAKGCTPNIV-TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ EELF E EK + + F LV + GMVE+ ++V+E M + +
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 323
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++N K+ A + + S GC P ++Y +++ CR + A+++ EM +
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKN 285
K V +++ + + + G I A L+ +M GCE N+ YN+L++ + GR +
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443
Query: 286 LRQL----------EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+L YTT+++ A D + E + ++V F
Sbjct: 444 ALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503
Query: 336 KLSQIEE 342
+ ++E
Sbjct: 504 QKGLMDE 510
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 106/221 (47%), Gaps = 3/221 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++T + I+ +++ K GR + +F +M G D Y +++ + A+EL
Sbjct: 318 ANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKEL 377
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
KE K + F + + ++G++E+ ++E M ++ +VNGF
Sbjct: 378 LKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCV 437
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ +A++++ S C P +TY +++ C A ++ EM QK VV
Sbjct: 438 QGRVDSALELF---YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 494
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +V+ + + G + +A+ LV +M GC PN+ YN+L+D
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 535
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 3/255 (1%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+L + GR + + R + G D Y +L+ + ++ A L +
Sbjct: 87 NLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAP 143
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + ++ + G V + L +++ M + S V++ K + A++V
Sbjct: 144 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 203
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ ++GC P VTY IIN CR G A + + GF V+Y++++
Sbjct: 204 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
R D L A+M K C PN ++ L+ R + + + +S + A +C
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 323
Query: 309 VKFYNEFRMNGGVID 323
N G V D
Sbjct: 324 NIVINTICKQGRVDD 338
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 93/225 (41%), Gaps = 4/225 (1%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T + + LCD GR E L DM +G Y L+ + A E+
Sbjct: 149 TPIIRGLCDR----GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 204
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E KG ++ + ++ EG V+ E + + + ++ G +
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+ +++ +++ + C+P +VT+ ++ +CR G+ +A +V +M G +
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 324
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
++ K GR+ DA + + M GC P+ Y +++ RA+
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAE 369
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + GR L+ F M K + Y +L+ + + A EL E
Sbjct: 428 YNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEML 484
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+K ++ F LV + ++G++++ +E+VE M + +++G +K
Sbjct: 485 QKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSE 544
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+++ L+S G P VTY+SII R +A K+F +Q G V Y+ ++
Sbjct: 545 EALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKIL 604
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K A+ A M GC PN Y +L++
Sbjct: 605 LALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIE 640
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 103/252 (40%), Gaps = 32/252 (12%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
T Y + L ++ R + + ++M K + + + IC ++ A L
Sbjct: 353 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 412
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN------------------- 158
++ E G ++ + LV + +G V+ LE+ SM
Sbjct: 413 IEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAER 472
Query: 159 --------AELNISDCISCVI-----VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
AE+ DC V+ V+ F ++ A+++ EQ++ GC P +TY +
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+++ + +A ++ + G +V YSS++ + + R+ +A+++ ++ G
Sbjct: 533 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592
Query: 266 CEPNVWIYNSLM 277
P IYN ++
Sbjct: 593 MRPKAVIYNKIL 604
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ ++ S+G P +I CR G S A +V ++ G V AY+++VA
Sbjct: 62 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y + G++ A RL+A M P+ + Y ++
Sbjct: 122 GYCRYGQLDAARRLIASMP---VAPDAYTYTPII 152
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 75/189 (39%), Gaps = 1/189 (0%)
Query: 42 AALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASL 101
AA L E + D P+ + +L + G E ++ M E G + Y +L
Sbjct: 475 AAAELLAEMLQKDCAPNVV-TFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTL 533
Query: 102 ICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
+ + A EL G+ D+ + ++ + E VE+ +++ +++ +
Sbjct: 534 LDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGM 593
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
I I+ KR A+ + ++S GC+P ++TY ++I +
Sbjct: 594 RPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRD 653
Query: 222 VFIEMQQKG 230
+ E+ +G
Sbjct: 654 LLRELCSRG 662
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 123/264 (46%), Gaps = 4/264 (1%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
S GI LD Y +M+ ++K G+ ++ E + + + Y L L + G
Sbjct: 509 SKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVA---YNALTKGLLRLG 565
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+ +E F M E G+ D Y S++ ++ + + A +L E + G++ ++ +
Sbjct: 566 K-YEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYN 624
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ + G +EK + V+ M + I ++ +S+ R A ++++++L+
Sbjct: 625 ILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDM 684
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G Q+ Y ++I CR+G+ KA V EM KG +V Y++++ Y + A
Sbjct: 685 GLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKA 744
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMD 278
++M G PN+ YN+L++
Sbjct: 745 FNTYSQMLVSGISPNITTYNALLE 768
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 3/275 (1%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
+++ L +MKS G++ + Y ++ K G EKV ++ E + TP +
Sbjct: 601 TENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPI---I 657
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+K L + +S +A IL+ + + + G+ + VY +LI + K A + E
Sbjct: 658 HKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMV 717
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + L+ Y VEK M + ++ + ++ G S
Sbjct: 718 IKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMR 777
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K+ ++ +G +P TY +++ + R+G + K++ EM KGF Y+ ++
Sbjct: 778 DADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLI 837
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y K G++R A L+ +M +G PN Y+ L+
Sbjct: 838 QDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLI 872
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 128/276 (46%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M +G++ D I+ + G + A L E + LD S Y + +
Sbjct: 259 YEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVS---YTTIISA 315
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR E M +GI D + +++ + K AEE+F+ + ++ +
Sbjct: 316 LLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPN 375
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + + G VE V++ M+ + + I+NG++K+ AV+V
Sbjct: 376 CVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLR 435
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ +P YA +++ Y R G + A + EM+ G ++ + + ++ ++G
Sbjct: 436 KMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSG 495
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+++A L+ + KG +V+ Y+SLMD + + N
Sbjct: 496 GMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGN 531
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 144/312 (46%), Gaps = 32/312 (10%)
Query: 53 LDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVK 112
+DL +T M D L K+G++ E + F+ + + ++ + Y +L+ + +V+
Sbjct: 339 IDLVLCTTMM-----DGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVE 393
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
AE + ++ E++ +L ++ F ++ Y ++GM+ K +EV+ M + + + +++
Sbjct: 394 FAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILL 453
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+G+ + + AA Y+++ S G + + ++N R G +A+ + ++ KG
Sbjct: 454 DGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIY 513
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK- 291
V YSS++ Y K G A+ +V +M K + +V YN+L K L +L K
Sbjct: 514 LDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNAL------TKGLLRLGKY 567
Query: 292 --------------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
Y +V++ Y + + + + NE + G + + I++
Sbjct: 568 EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILI 627
Query: 332 GVFSKLSQIEEL 343
G K IE++
Sbjct: 628 GGLCKTGAIEKV 639
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 130/286 (45%), Gaps = 7/286 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ +M GI +D +M+ +K G S++ +F KL+L P+ Y L
Sbjct: 326 FNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTI--LKLNLVPNCV-TYTAL 382
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D K G + M+++ +L + ++S+I +A + A E+ ++ + +
Sbjct: 383 LDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNI 442
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ ++ V+ L+ Y G E + MK+ L ++ I +++N + A
Sbjct: 443 MPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQS 502
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + ++S+G Y+S+++ Y + G S A V EM +K VVAY+++
Sbjct: 503 LIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLL 562
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
+ G+ + + ++M G P+ YNS+M+ + G+ +N L
Sbjct: 563 RLGKY-EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDL 607
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 29/252 (11%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL------FK 119
L D + G L D + G+ D Y +L+ +F ++ AE + F+
Sbjct: 151 LVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFR 210
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
+E G+L D V E + +++ + + + ++ + K R
Sbjct: 211 RDDESGVLNDCGV------------------ETWDGLRDLQPTVVTWTT--LIAAYCKHR 250
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+YEQ+I G +P VT +SI+ CR G ++A + EM G D V+Y+
Sbjct: 251 GIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYT 310
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
++++ K+GR+ +A ++M +G ++ + ++MD +A ++ E+ I
Sbjct: 311 TIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKL 370
Query: 300 NMAREFDMCVKF 311
N+ CV +
Sbjct: 371 NLVPN---CVTY 379
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 95/206 (46%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
+ + M G++ D +S++ ++ A L +E G+ + + ++
Sbjct: 254 DFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTII 313
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
++ G V + M ++I + +++G K A ++++ ++ +
Sbjct: 314 SALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLV 373
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P VTY ++++ +C++G AE V +M+++ VV +SS++ Y K G + A+ +
Sbjct: 374 PNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEV 433
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ KM PNV++Y L+D + R
Sbjct: 434 LRKMVQMNIMPNVFVYAILLDGYFRT 459
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+V GF KR + +++ +G VT ++ YC+IGL AE + +
Sbjct: 80 TVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGG 139
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G + +++V Y + G + A+ LV G +P++ YN+L++ + +L +
Sbjct: 140 GVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKA 199
Query: 290 EKYTTVISAY 299
E I +
Sbjct: 200 ESVVNEILGF 209
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 120/286 (41%), Gaps = 30/286 (10%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYAS--LICSFASI 108
R L L PS ++ L SG ++ + +M G++ P+V++ L+ S +
Sbjct: 2 RALSLVPS-LPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVV--PNVFSVNLLVHSLCKV 58
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ +A + + + D + +V + + G+ ++ ++ M + D ++
Sbjct: 59 GDLGLALGYLRNS-----VFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCF-DSVT 112
Query: 169 C-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
C ++V G+ + A + L+ G + ++++ YC +GL S+A + +
Sbjct: 113 CNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGW 172
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP----------KGCEPNVWIYNSLM 277
+ G +V Y+++V + K G + A +V ++ C W + L
Sbjct: 173 KNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETW--DGLR 230
Query: 278 DMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
D+ + +TT+I+AY R D Y + M+G + D
Sbjct: 231 DLQ------PTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPD 270
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 45/264 (17%), Positives = 108/264 (40%), Gaps = 15/264 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++K+ G+ L+ Y ++ ++G ++K + E + + + Y L
Sbjct: 675 LQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGIS---ADIVTYNAL 731
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ + M GI + + Y +L+ ++ ++ A++L E E+G+
Sbjct: 732 IRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGL 791
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + + LV + G ++++ M + V++ ++K A +
Sbjct: 792 VPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARE 851
Query: 187 VYEQLISQGCIPGQVTYASIINAYC------------RIGLYSKAEKVFIEMQQKGFDKC 234
+ +++++G IP TY +I +C ++ ++A+K+ EM +KG
Sbjct: 852 LLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPS 911
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLV 258
+ + + G+ DA RL+
Sbjct: 912 ESTLMYISSNFSAPGKRDDAKRLL 935
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 95/220 (43%), Gaps = 16/220 (7%)
Query: 78 EILKFFRDMKEKGILED-------------PSV--YASLICSFASIAEVKVAEELFKEAE 122
EIL F RD E G+L D P+V + +LI ++ + L+++
Sbjct: 205 EILGFRRD-DESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMI 263
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G++ D+ ++ G + + ++ M N L+ + I++ K
Sbjct: 264 MSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVM 323
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A Q++ +G V ++++ + G +AE++F + + V Y++++
Sbjct: 324 EAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALL 383
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+ K G + A ++ KM+ + PNV ++S+++ + +
Sbjct: 384 DGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAK 423
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 131/260 (50%), Gaps = 7/260 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ A+Y+ + ++ + + +D P Y IL GK+G + I + F
Sbjct: 33 YNAMIAAYYQAKRPKDAWDVYYQMLAEGID--PDDV-TYDILVSGSGKNG--YPIDRLFL 87
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
++K +G+ Y +IC+F + EE+ +E + + DL F L+ Y
Sbjct: 88 EIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSR 147
Query: 145 MVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
E+ L+V +MK A + + D ++ ++ FS+ + A++++E+++ C P Y
Sbjct: 148 KPERGLQVFSNMKAAGV-LPDIVTYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFVY 206
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+ +++ Y + GL + A +F +Q +G +V Y+S+++ + G + ++ + ++M+
Sbjct: 207 SLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEA 266
Query: 264 KGCEPNVWIYNSLMDMHGRA 283
GC +V + N+++D + +A
Sbjct: 267 YGCRADVHLLNTMIDAYAKA 286
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 125/260 (48%), Gaps = 5/260 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M + GI D Y ++ K G + LFLE +SR + LT S Y ++ +
Sbjct: 53 YYQMLAEGIDPDDVTYDILVSGSGKNG--YPIDRLFLEIKSRGVALTLRS---YNVVICA 107
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G ++ + R+M + + D + +LI ++A + + ++F + G+L D
Sbjct: 108 FTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMKAAGVLPD 167
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ M+ M ++ +E+ E M + + ++V+ + K A+ ++
Sbjct: 168 IVTYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFH 227
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L +G P VTY S+I+A+ GL ++ K F +M+ G V ++M+ Y K G
Sbjct: 228 RLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAG 287
Query: 250 RIRDAMRLVAKMKPKGCEPN 269
+ DA L+ ++ +G PN
Sbjct: 288 MVNDAANLLHRLTAQGVCPN 307
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
++KS G+ L Y ++ AF K G +KV + E ++L S + L +
Sbjct: 88 EIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFS---FNALIAAYA 144
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
S + L+ F +MK G+L D Y +LI F+ A K A E+F+E D
Sbjct: 145 MSRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFF 204
Query: 132 VFLKLVLMYIEEGMVEKTLEV-----VESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
V+ LV +Y + G+V L + +E + + + IS + G + + K
Sbjct: 205 VYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEE-----SRK 259
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ Q+ + GC ++I+AY + G+ + A + + +G +Y+ +V +
Sbjct: 260 HFSQMEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFL 319
Query: 247 KTGRIRDAMRLVAKMKPKG 265
G + +A+ A M G
Sbjct: 320 HAGHVDEALAAYASMSEAG 338
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 84/225 (37%), Gaps = 38/225 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + MK+AG++ D Y +++ F + ++ +F E K +Y +L
Sbjct: 153 LQVFSNMKAAGVLPDIVTYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQ---PDFFVYSLL 209
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
GK+G + L F ++ +G + Y SLI + ++ + + F + E G
Sbjct: 210 VSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGC 269
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + ++ Y + GMV A
Sbjct: 270 RADVHLLNTMIDAYAKAGMVND-----------------------------------AAN 294
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ +L +QG P + +YA I+ + G +A + M + GF
Sbjct: 295 LLHRLTAQGVCPNRASYAIIVEGFLHAGHVDEALAAYASMSEAGF 339
>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g22960, mitochondrial; Flags: Precursor
gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 718
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 4/273 (1%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D Y +M + K+G + + LF + R D+ PS Y L D L +SG
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDL--RAGDIHPSIV-TYNTLIDGLCESGNLEGAQ 429
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ +M + I D Y +L+ F + +A E++ E KG+ D + +
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGE 489
Query: 141 IEEGMVEKTLEVVESMKNAELNISD-CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G +K + E M + + D I V ++G K A++ ++ G +P
Sbjct: 490 LRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD 549
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY ++I Y G + A ++ EM +K V+ Y ++ + K GR+ A +
Sbjct: 550 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYST 609
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+MK +G PNV +N+L+ +A N+ + +Y
Sbjct: 610 EMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY 642
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 145/358 (40%), Gaps = 61/358 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE M GI+ + ++++ +K GD E+V ++LE + R ++ + + Y IL +
Sbjct: 226 YETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVT---YNILING 282
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDP---------------------------------- 95
K+G+ E +F DM+ G P
Sbjct: 283 FSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPT 342
Query: 96 -SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG-MVEKTLEVV 153
S Y IC+ + A EL D+ + L+ YI+ G VE +L +
Sbjct: 343 TSTYNIYICALCDFGRIDDARELLSSMAAP----DVVSYNTLMHGYIKMGKFVEASL-LF 397
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ ++ +++ S +++G + A ++ E++ +Q P +TY +++ + +
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE-PNVWI 272
G S A +V+ EM +KG AY++ + G A RL +M P++ I
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 273 YNSLMDMHGRAKNL-------RQLEK---------YTTVISAYNMAREFDMCVKFYNE 314
YN +D + NL R++ + YTTVI Y +F M Y+E
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 575
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 6/171 (3%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A +++ E G++ + F ++ + G +E+ ++ MK + S+ +++N
Sbjct: 222 ASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILIN 281
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
GFSK A + + + G ++ +I YC+ GL+ A V EM G
Sbjct: 282 GFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYP 341
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
Y+ + GRI DA L++ M P+V YN+L MHG K
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTL--MHGYIK 386
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Query: 139 MYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+Y ++ M EK L E M K ++ +C +++ R A VYE +I G
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNC--NIVLKVLRDSRMMNKASAVYETMIEHGI 234
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
+P +T+ +++++ + G + +K+++EM+++ + V Y+ ++ + K G++ +A R
Sbjct: 235 MPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR 294
Query: 257 LVAKMKPKGCEPNVWIYNSLMD 278
M+ G + +N L++
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIE 316
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/281 (18%), Positives = 110/281 (39%), Gaps = 37/281 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M GI D Y ++GDS+K A L E D +Y + D
Sbjct: 467 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDK--AFRLHEEMVATDHHAPDLTIYNVRIDG 524
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G + ++F R + G++ D Y ++I + + K+A L+ E K +
Sbjct: 525 LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPS 584
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + G +E+ + MK
Sbjct: 585 VITYFVLIYGHAKAGRLEQAFQYSTEMK-------------------------------- 612
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+G P +T+ +++ C+ G +A + +M+++G +Y+ +++
Sbjct: 613 ---KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFE 669
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ + ++L +M K EP+ + + +L + R++E
Sbjct: 670 KWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVE 710
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 141/301 (46%), Gaps = 6/301 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + +E M+S+ + + Y ++ K G+ EK L LE RK +
Sbjct: 112 NPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKAREL-LEEMIRKGGKSAPDIV 170
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L ++ ++ R E F MK GI D L+ +V+ A E+
Sbjct: 171 TYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGM 230
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRA 180
+ G + D+ + ++ G V + E++++M + D ++ +++GF K
Sbjct: 231 KLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCS----PDLVTFNTLLDGFCKAGM 286
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A++V E++ + +P +TY ++N CR+G A + E+ ++G+ V+AY+S
Sbjct: 287 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 346
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
+V K+G I +A +LV +M +GC V +Y+SL+ + RA N+ + + + + N
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSIN 406
Query: 301 M 301
M
Sbjct: 407 M 407
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 5/215 (2%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL + K G E L+ MK G + D Y S+I + +V A E+ K
Sbjct: 208 NILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSC 267
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYW 182
DL F L+ + + GM+ + LEV+E M + + D I+ ++VNG +
Sbjct: 268 S---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI-LPDVITYTILVNGLCRVGQVQ 323
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + E+++ QG IP + Y S+++ C+ G +A K+ EM +G VV YSS+V
Sbjct: 324 VAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLV 383
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ Y + G + A ++A+M P ++ YN ++
Sbjct: 384 SGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVL 418
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL + L + G+ ++ +G + D Y SL+ E++ A +L KE
Sbjct: 309 YTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMS 368
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G + ++ LV Y G V K E++ M + + +++ G K +
Sbjct: 369 VRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSIS 428
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AV + L+++G +P VTY ++I+ C+ +A + EM +G V S+V
Sbjct: 429 KAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVV 488
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ GR+ DA LV +M K PNV +Y SL+D
Sbjct: 489 FGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLID 524
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 122/272 (44%), Gaps = 5/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L E+M I+ D Y ++ ++G + A +L E + P Y L
Sbjct: 291 LEVLEEMCRENILPDVITYTILVNGLCRVGQVQ--VAFYLLEEIVRQGYIPDVI-AYTSL 347
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L KSG E K ++M +G +Y+SL+ + V A E+ E M
Sbjct: 348 VDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINM 407
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAV 185
+ L + ++ I++G + K + ++ + A + D ++ +++G K A
Sbjct: 408 VPPLFTYNIVLGGLIKDGSISKAVSLISDLV-ARGYVPDVVTYNTLIDGLCKANRVREAC 466
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ +++ S+GC P VT S++ CR+G A + +EM +K VV Y+S++
Sbjct: 467 DLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGL 526
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K+ R+ DA ++ M+ +G + + Y L+
Sbjct: 527 CKSDRMDDACMVLDAMRGQGVALDDFAYRKLI 558
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 104/219 (47%), Gaps = 2/219 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y L D L KSG F K ++D+ G + + LI + A E +
Sbjct: 28 HSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRA 87
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E + D+ +F L+ ++G ++ +++ E+M+++ + +++G K
Sbjct: 88 LDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGN 147
Query: 181 YWAAVKVYEQLISQG--CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A ++ E++I +G P VTY ++INA+ R +A +M+ G + V+
Sbjct: 148 LEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTC 207
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ +V+ K G + +A+ ++ MK G P+V YNS++
Sbjct: 208 NILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSII 246
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 69/175 (39%), Gaps = 18/175 (10%)
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
KVY+ L+ GC P VT+ +I C+ G +A + + + V ++ ++
Sbjct: 48 KVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGL 107
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-------------- 291
K G A++L M+ +P + YN+++ ++ NL + +
Sbjct: 108 FKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAP 167
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y T+I+A+ A F + + G D I+V K +EE
Sbjct: 168 DIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEE 222
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 78/207 (37%), Gaps = 3/207 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ + + G+ K + E S +++ P Y I+ L K G + +
Sbjct: 379 YSSLVSGYCRAGNVHKAREILAEMVS--INMVPP-LFTYNIVLGGLIKDGSISKAVSLIS 435
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
D+ +G + D Y +LI V+ A +L E +G + +V G
Sbjct: 436 DLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVG 495
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
V+ +V M + + +++G K A V + + QG Y
Sbjct: 496 RVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYR 555
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGF 231
+I + G ++A ++ EM +GF
Sbjct: 556 KLIVSMSHGGRVAEAMAMYDEMVARGF 582
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 132/318 (41%), Gaps = 58/318 (18%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE- 78
LD Y I+ ++ + G ++ LF + + LD T + Y ++ D GK GR+++
Sbjct: 213 LDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVT---YNVMLDVYGKMGRSWDR 269
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
IL+ +M+ KG+ D +++I +
Sbjct: 270 ILELLDEMRSKGLELDEFTCSTVISACG-------------------------------- 297
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
EGM+++ + + +K ++ F K Y A+ + +++ C P
Sbjct: 298 ---REGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPP 354
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
VTY + Y R G + V M KG + Y++++ YGK GR DA+RL
Sbjct: 355 DSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLF 414
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMN 318
+ MK GC PNV+ YNS++ M G+ +R D+ +K E ++N
Sbjct: 415 SLMKDLGCAPNVYTYNSVLAMLGKK------------------SRTEDV-IKVLCEMKLN 455
Query: 319 GGVIDRAMAGIMVGVFSK 336
G +RA M+ V S+
Sbjct: 456 GCAPNRATWNTMLAVCSE 473
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 107/229 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D+ GK+GR + L+ F MK+ G + Y S++ + + ++ E +
Sbjct: 394 YTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMK 453
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G + + ++ + EEG +V+ MKN +++ +++ +
Sbjct: 454 LNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEV 513
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ K+Y +++ G P TY +++NA R G + AE V +M+ KGF +YS ++
Sbjct: 514 DSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLL 573
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
Y K G ++ ++ ++ P+ + +L+ + + ++LR +E+
Sbjct: 574 HCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMER 622
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 124/307 (40%), Gaps = 38/307 (12%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK+ G D + ++ A+ + G A ++ E K TP T Y L ++L
Sbjct: 486 EMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMY--GEMVKSGFTPCVT-TYNALLNALA 542
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE-------- 123
+ G +DM+ KG + + Y+ L+ ++ VK E++ KE +
Sbjct: 543 RRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWI 602
Query: 124 ---------------KGMLR------------DLEVFLKLVLMYIEEGMVEKTLEVVESM 156
+GM R DL V ++ M+ M K E++ +
Sbjct: 603 LLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFI 662
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
L + +++ + + W A +V + + + G P V+Y ++I +CR GL
Sbjct: 663 HECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLM 722
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+A V EM KG +V Y++ ++ Y +A ++ M C P+ Y L
Sbjct: 723 QEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKIL 782
Query: 277 MDMHGRA 283
+D + +A
Sbjct: 783 VDGYCKA 789
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+S A K+F + + + V AY++++ Y +TG+ + A+ L KMK G +P + YN
Sbjct: 196 HSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNV 255
Query: 276 LMDMHG----------------RAKNLRQLEKYT--TVISAYNMAREFDMCVKFYNEFRM 317
++D++G R+K L +L+++T TVISA D KF E +
Sbjct: 256 MLDVYGKMGRSWDRILELLDEMRSKGL-ELDEFTCSTVISACGREGMLDEARKFLAELKF 314
Query: 318 NGGVIDRAMAGIMVGVFSK 336
NG M+ VF K
Sbjct: 315 NGYKPGTVTYNSMLQVFGK 333
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 131/307 (42%), Gaps = 14/307 (4%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E R TP+ Y ++ + + + GR + +F + G D Y +++ +
Sbjct: 205 EMRAKGCTPNIV-TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ EELF E EK + + F LV + GMVE+ ++V+E M + +
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 323
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++N K+ A + + S GC P ++Y +++ CR + A+++ EM +
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKN 285
K V +++ + + + G I A L+ +M GCE N+ YN+L++ + GR +
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443
Query: 286 LRQL----------EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+L YTT+++ A D + E + ++V F
Sbjct: 444 ALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503
Query: 336 KLSQIEE 342
+ ++E
Sbjct: 504 QKGLMDE 510
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 106/221 (47%), Gaps = 3/221 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++T + I+ +++ K GR + +F +M G D Y +++ + A+EL
Sbjct: 318 ANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKEL 377
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
KE K + F + + ++G++E+ ++E M ++ +VNGF
Sbjct: 378 LKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCV 437
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ +A++++ S C P +TY +++ C A ++ EM QK VV
Sbjct: 438 QGRVDSALELF---YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 494
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +V+ + + G + +A+ LV +M GC PN+ YN+L+D
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 535
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 3/255 (1%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+L + GR + + R + G D Y +L+ + ++ A L +
Sbjct: 87 NLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAP 143
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + ++ + G V + L +++ M + S V++ K + A++V
Sbjct: 144 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 203
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ ++GC P VTY IIN CR G A + + GF V+Y++++
Sbjct: 204 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
R D L A+M K C PN ++ L+ R + + + +S + A +C
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 323
Query: 309 VKFYNEFRMNGGVID 323
N G V D
Sbjct: 324 NIVINTICKQGRVDD 338
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 93/225 (41%), Gaps = 4/225 (1%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T + + LCD GR E L DM +G Y L+ + A E+
Sbjct: 149 TPIIRGLCDR----GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 204
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E KG ++ + ++ EG V+ E + + + ++ G +
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+ +++ +++ + C+P +VT+ ++ +CR G+ +A +V +M G +
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 324
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
++ K GR+ DA + + M GC P+ Y +++ RA+
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAE 369
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 3/216 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + GR L+ F M K + Y +L+ + + A EL E
Sbjct: 428 YNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEML 484
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+K ++ F LV + ++G++++ +E+VE M + +++G +
Sbjct: 485 QKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSE 544
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+++ L+S G P VTY+SII R +A K+F +Q G V Y+ ++
Sbjct: 545 EALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKIL 604
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K A+ A M GC PN Y +L++
Sbjct: 605 LALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIE 640
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 102/252 (40%), Gaps = 32/252 (12%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
T Y + L ++ R + + ++M K + + + IC ++ A L
Sbjct: 353 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 412
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN------------------- 158
++ E G ++ + LV + +G V+ LE+ SM
Sbjct: 413 IEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAER 472
Query: 159 --------AELNISDCISCVI-----VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
AE+ DC V+ V+ F ++ A+++ EQ++ GC P +TY +
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+++ +A ++ + G +V YSS++ + + R+ +A+++ ++ G
Sbjct: 533 LLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592
Query: 266 CEPNVWIYNSLM 277
P IYN ++
Sbjct: 593 MRPKAVIYNKIL 604
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ ++ S+G P +I CR G S A +V ++ G V AY+++VA
Sbjct: 62 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y + G++ A RL+A M P+ + Y ++
Sbjct: 122 GYCRYGQLDAARRLIASMP---VAPDAYTYTPII 152
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 76/189 (40%), Gaps = 1/189 (0%)
Query: 42 AALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASL 101
AA L E + D P+ + +L + G E ++ M E G + Y +L
Sbjct: 475 AAAELLAEMLQKDCAPNVV-TFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTL 533
Query: 102 ICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
+ + + A EL G+ D+ + ++ + E VE+ +++ +++ +
Sbjct: 534 LDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGM 593
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
I I+ KR A+ + ++S GC+P ++TY ++I +
Sbjct: 594 RPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRD 653
Query: 222 VFIEMQQKG 230
+ E+ +G
Sbjct: 654 LLRELCSRG 662
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 18/281 (6%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+++F M E G D Y+++I ++ V +A +L+ A + D F L+ +
Sbjct: 231 VEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRI 290
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
Y G + L V E MK + + I +++ + + W A +Y+++ + G P
Sbjct: 291 YGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPS 350
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
TYA+++ AY R A V+ EM++KG + VV Y++++AM G +A +
Sbjct: 351 WGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFE 410
Query: 260 KMKPKG-CEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMA 302
MK G C P+ W ++SL+ ++ + + + E T++I Y A
Sbjct: 411 DMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKA 470
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
D V+ ++ D G M+ V ++ S EEL
Sbjct: 471 NRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQ-SPKEEL 510
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+VF K + E + ++ LE +K + S ISC V+ + W +E
Sbjct: 183 LKVFRKCRNLDRAEKLFDEMLE--RGVKPDNITFSTIISCARVSSLPNKAVEW-----FE 235
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ GC P VTY+++I+AY R G A K++ + + + V +S+++ +YG +G
Sbjct: 236 KMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSG 295
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YT 293
+ + +MK G +PN+ IYN+L+D GRAK Q + Y
Sbjct: 296 NFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYA 355
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++ AY AR + + Y E + G + + ++ + + + EE
Sbjct: 356 ALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEE 404
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 112/287 (39%), Gaps = 66/287 (22%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP--------- 57
+ ++EKM G D Y +++A+ + G+ + L+ + K + P
Sbjct: 231 VEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRI 290
Query: 58 -----------------------SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
+ +Y L D++G++ R ++ +++M G+
Sbjct: 291 YGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPS 350
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
YA+L+ ++ + A ++KE +EKG+ + ++ L+ M + G E+ + E
Sbjct: 351 WGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFE 410
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MK+ S C+P T++S+I Y G
Sbjct: 411 DMKS----------------------------------SGNCMPDSWTFSSLITIYSCSG 436
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
S+AE + M + GF+ + +S++ YGK R + +R ++
Sbjct: 437 KVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRL 483
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 116/222 (52%), Gaps = 4/222 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL GK+G + I + F ++K +G+ Y +IC+F + EE+ +E
Sbjct: 68 YDILVSGSGKNG--YPIDRLFLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMI 125
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
+ + DL F L+ Y E+ L+V +MK A + + D ++ ++ FS+ +
Sbjct: 126 RQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMKAAGV-LPDIVTYTTLIQMFSRSSMH 184
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A++++E+++ C P Y+ +++ Y + GL + A +F +Q +G +V Y+S+
Sbjct: 185 KEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSL 244
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
++ + G + ++ + ++M+ GC +V + N+++D + +A
Sbjct: 245 ISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKA 286
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 125/260 (48%), Gaps = 5/260 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M + GI D Y ++ K G + LFLE +SR + LT S Y ++ +
Sbjct: 53 YHQMLAEGIDPDEVTYDILVSGSGKNG--YPIDRLFLEIKSRGVALTLRS---YNVVICA 107
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G ++ + R+M + + D + +LI ++A + + ++F + G+L D
Sbjct: 108 FTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMKAAGVLPD 167
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ M+ M ++ +E+ E M + + ++V+ + K A+ ++
Sbjct: 168 IVTYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFH 227
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L +G P VTY S+I+A+ GL ++ K F +M+ G V ++M+ Y K G
Sbjct: 228 RLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAG 287
Query: 250 RIRDAMRLVAKMKPKGCEPN 269
+ DA L+ ++ +G PN
Sbjct: 288 MVNDAANLLHRLTAQGVCPN 307
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
++KS G+ L Y ++ AF K G +KV + E ++L S + L +
Sbjct: 88 EIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFS---FNALIAAYA 144
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
S + L+ F +MK G+L D Y +LI F+ + K A E+F+E D
Sbjct: 145 MSRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFF 204
Query: 132 VFLKLVLMYIEEGMVEKTLEV-----VESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
V+ LV +Y + G+V L + +E + + + IS + G + + K
Sbjct: 205 VYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEE-----SRK 259
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ Q+ + GC ++I+AY + G+ + A + + +G +Y+ +V +
Sbjct: 260 HFSQMEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFL 319
Query: 247 KTGRIRDAMRLVAKMKPKG 265
G + +A+ A M G
Sbjct: 320 HAGHVEEALAAYASMSGAG 338
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 78/159 (49%), Gaps = 21/159 (13%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A VY Q++++G P +VTY +++ + G +++F+E++ +G + +Y+ ++
Sbjct: 49 AWDVYHQMLAEGIDPDEVTYDILVSGSGKNGY--PIDRLFLEIKSRGVALTLRSYNVVIC 106
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
+ K G I ++ +M + P+++ +N+L I+AY M+R
Sbjct: 107 AFTKEGSIDKVEEVIREMIRQELRPDLFSFNAL-------------------IAAYAMSR 147
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ + ++ ++ + G + D ++ +FS+ S +E
Sbjct: 148 KPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSSMHKE 186
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 83/225 (36%), Gaps = 38/225 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + MK+AG++ D Y +++ F + ++ +F E K +Y +L
Sbjct: 153 LQVFSNMKAAGVLPDIVTYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQ---PDFFVYSLL 209
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
GK+G + L F ++ +G + Y SLI + ++ + + F + E G
Sbjct: 210 VSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGC 269
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + ++ Y + GMV A
Sbjct: 270 RADVHLLNTMIDAYAKAGMVND-----------------------------------AAN 294
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ +L +QG P + +YA I+ + G +A + M GF
Sbjct: 295 LLHRLTAQGVCPNRASYAIIVEGFLHAGHVEEALAAYASMSGAGF 339
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 149/322 (46%), Gaps = 22/322 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S G+V Y I+ A+ + G A+L L ++ ++PS Y + ++
Sbjct: 157 FDEMPSNGVVRTVYSYTAIINAYGRNGQFH--ASLELLNGMKQERVSPS-ILTYNTVINA 213
Query: 70 LGKSGRAFE-ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ G +E +L F +M+ +GI D Y +L+ + A AE +F+ E G++
Sbjct: 214 CARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVP 273
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKV 187
D+ + LV + + +EK E++ M+ N+ D S V++ +++ + A+ V
Sbjct: 274 DINTYSYLVQTFGKLNRLEKVSELLREMECGG-NLPDITSYNVLLEAYAELGSIKEAMGV 332
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ Q+ + GC+ TY+ ++N Y + G Y +F+EM+ D Y+ ++ ++G+
Sbjct: 333 FRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGE 392
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
G ++ + L M + EPN+ Y L+ G+ +K
Sbjct: 393 GGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKA 452
Query: 292 YTTVISAYNMAREFDMCVKFYN 313
YT VI A+ A ++ + +N
Sbjct: 453 YTGVIEAFGQAALYEEALVMFN 474
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 117/287 (40%), Gaps = 38/287 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M++AG V ++ Y ++ + K G + V LFLE K+ T Y IL
Sbjct: 333 FRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEM---KVSNTDPDAGTYNILIQV 389
Query: 70 LGKSGRAFEILKFFRDM-----------------------------------KEKGILED 94
G+ G E++ F DM EKG++
Sbjct: 390 FGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPS 449
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y +I +F A + A +F E G +E + L+ + G+ ++ ++
Sbjct: 450 SKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILS 509
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M + L ++ F + Y AVK Y ++ C P ++T ++++ YC G
Sbjct: 510 RMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAG 569
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
L + E+ F E++ G V+ Y M+A+Y K R+ DA L+ M
Sbjct: 570 LVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAM 616
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 122/292 (41%), Gaps = 32/292 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTP---------- 57
+ M +GIV D Y +++ F K+ EKV+ L +EC D+T
Sbjct: 263 FRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAE 322
Query: 58 --------------------SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
++ Y +L + GK GR ++ F +MK D
Sbjct: 323 LGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGT 382
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y LI F K LF + E+ + +++ + L+ + G+ E +++ M
Sbjct: 383 YNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMN 442
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ S ++ F + Y A+ ++ + G P TY S+I+A+ R GLY
Sbjct: 443 EKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYK 502
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
+AE + M + G + V +++ ++ + + G+ +A++ +M+ CEPN
Sbjct: 503 EAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPN 554
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 133/313 (42%), Gaps = 3/313 (0%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +M+ GI D Y ++ A G ++ +F + P + Y L
Sbjct: 225 LGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNES--GIVPD-INTYSYL 281
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ GK R ++ + R+M+ G L D + Y L+ ++A + +K A +F++ + G
Sbjct: 282 VQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGC 341
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + + L+ +Y + G + ++ MK + + +++ F + + V
Sbjct: 342 VANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVT 401
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ + + P TY +I A + GLY A+K+ + M +KG AY+ ++ +G
Sbjct: 402 LFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFG 461
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
+ +A+ + M G P V YNSL+ R ++ E + ++ + R+
Sbjct: 462 QAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVH 521
Query: 307 MCVKFYNEFRMNG 319
FR G
Sbjct: 522 SFNGVIEAFRQGG 534
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/329 (18%), Positives = 133/329 (40%), Gaps = 54/329 (16%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ + + F + GD ++ LF + R++ P+ H++ I+ LG+ G + + F
Sbjct: 101 FALVFKEFAQRGDWQRSLRLF-KYMQRQIWCKPNE-HIHTIMITLLGREGLLDKCREVFD 158
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M G++ Y ++I ++ G
Sbjct: 159 EMPSNGVVRTVYSYTAIINAYG-----------------------------------RNG 183
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA-VKVYEQLISQGCIPGQVTY 203
+LE++ MK ++ S ++N ++ W + ++ ++ +G P +TY
Sbjct: 184 QFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITY 243
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+++ A GL +AE VF M + G + YS +V +GK R+ L+ +M+
Sbjct: 244 NTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMEC 303
Query: 264 KGCEPNVWIYNSLMDMHGRAKNL-------RQLE---------KYTTVISAYNMAREFDM 307
G P++ YN L++ + ++ RQ++ Y+ +++ Y +D
Sbjct: 304 GGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDD 363
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+ E +++ D I++ VF +
Sbjct: 364 VRDLFLEMKVSNTDPDAGTYNILIQVFGE 392
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 109/236 (46%), Gaps = 30/236 (12%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+E + + G + + L+ KN +L+++D ++ F++R + +++++
Sbjct: 68 DVETLINRLTALPPRGSIARCLD---PFKN-KLSLNDF--ALVFKEFAQRGDWQRSLRLF 121
Query: 189 EQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ + Q C P + + +I R GL K +VF EM G + V +Y++++ YG+
Sbjct: 122 KYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGR 181
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-----------KNLRQ------LE 290
G+ ++ L+ MK + P++ YN++++ R +R +
Sbjct: 182 NGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVI 241
Query: 291 KYTTVISA---YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
Y T++ A + E +M + NE +G V D +V F KL+++E++
Sbjct: 242 TYNTLLGACAHRGLGDEAEMVFRTMNE---SGIVPDINTYSYLVQTFGKLNRLEKV 294
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 113/239 (47%), Gaps = 1/239 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y + LG++ + I K +M G + Y LI S+ + A +F
Sbjct: 389 HTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDR 448
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G D + L+ ++ + G ++ L + + M+ A L+ VI+N K
Sbjct: 449 MQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGH 508
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+A K++ +++ QGC+P VTY +I + Y A +++ +MQ GF V YS
Sbjct: 509 LTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSI 568
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLEKYTTVISA 298
++ + G G + +A + +MK K P+ +Y L+D+ G+ N+ + E Y +++A
Sbjct: 569 VMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNA 627
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 109/264 (41%), Gaps = 20/264 (7%)
Query: 80 LKFFRDMK-EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
L FF +K + G D Y +++ + +L E G ++ + +L+
Sbjct: 372 LGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIH 431
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
Y + + + V + M+ A C +++ +K A+ +Y+++ P
Sbjct: 432 SYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSP 491
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
TY+ IIN + G + A K+F EM +G +V Y+ M+A+ K A+ L
Sbjct: 492 DTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELY 551
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMN 318
M+ G +P+ Y+ +M++ G +L + E + E +
Sbjct: 552 RDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAE-------------------AIFTEMKRK 592
Query: 319 GGVIDRAMAGIMVGVFSKLSQIEE 342
V D + G++V ++ K+ +E+
Sbjct: 593 NWVPDEPVYGLLVDLWGKVGNVEK 616
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 7/204 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH Y+KM+ A + D+ Y I+ K G LF CE P+ Y I+
Sbjct: 478 LHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLF--CEMVDQGCVPNLV-TYNIM 534
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
K+ L+ +RDM+ G D Y+ ++ ++ AE +F E + K
Sbjct: 535 IALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNW 594
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCVIVNGFSKRRAYWAA 184
+ D V+ LV ++ + G VEK+ E ++M NA L N+ C S +++ F + A
Sbjct: 595 VPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNS--LLSAFLRVHRLSDA 652
Query: 185 VKVYEQLISQGCIPGQVTYASIIN 208
+ + ++ G P TY +++
Sbjct: 653 YNLLQSMLRLGLQPSLQTYTLLLS 676
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 106/234 (45%), Gaps = 3/234 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M+ AG D YC +++ K G + AL + + ++ L+P T Y ++ +
Sbjct: 446 FDRMQEAGCQPDRVTYCTLIDIHAKAGFLD--VALHMYQKMQEAHLSPD-TFTYSVIINC 502
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LGK+G K F +M ++G + + Y +I A A EL+++ + G D
Sbjct: 503 LGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPD 562
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + G +E+ + MK + + ++V+ + K + + Y+
Sbjct: 563 KVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQ 622
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+++ G P T S+++A+ R+ S A + M + G + Y+ +++
Sbjct: 623 AMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLS 676
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + L Y M++AG D Y +ME G E+ A+F E ++ + P
Sbjct: 543 NYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEM--KRKNWVPDEP- 599
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D GK G + ++++ M G+ + SL+ +F + + A L +
Sbjct: 600 VYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSM 659
Query: 122 EEKGMLRDLEVFLKLV 137
G+ L+ + L+
Sbjct: 660 LRLGLQPSLQTYTLLL 675
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 131/307 (42%), Gaps = 14/307 (4%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E R TP+ Y ++ + + + GR + +F + G D Y +++ +
Sbjct: 236 EMRAKGCTPNIV-TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 294
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ EELF E EK + + F LV + GMVE+ ++V+E M + +
Sbjct: 295 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 354
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++N K+ A + + S GC P ++Y +++ CR + A+++ EM +
Sbjct: 355 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 414
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKN 285
K V +++ + + + G I A L+ +M GCE N+ YN+L++ + GR +
Sbjct: 415 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 474
Query: 286 LRQL----------EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+L YTT+++ A D + E + ++V F
Sbjct: 475 ALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 534
Query: 336 KLSQIEE 342
+ ++E
Sbjct: 535 QKGLMDE 541
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 106/221 (47%), Gaps = 3/221 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++T + I+ +++ K GR + +F +M G D Y +++ + A+EL
Sbjct: 349 ANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKEL 408
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
KE K + F + + ++G++E+ ++E M ++ +VNGF
Sbjct: 409 LKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCV 468
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ +A++++ S C P +TY +++ C A ++ EM QK VV
Sbjct: 469 QGRVDSALELF---YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 525
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +V+ + + G + +A+ LV +M GC PN+ YN+L+D
Sbjct: 526 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 566
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 3/255 (1%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+L + GR + + R + G D Y +L+ + ++ A L +
Sbjct: 118 NLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAP 174
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + ++ + G V + L +++ M + S V++ K + A++V
Sbjct: 175 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 234
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ ++GC P VTY IIN CR G A + + GF V+Y++++
Sbjct: 235 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 294
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
R D L A+M K C PN ++ L+ R + + + +S + A +C
Sbjct: 295 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 354
Query: 309 VKFYNEFRMNGGVID 323
N G V D
Sbjct: 355 NIVINTICKQGRVDD 369
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 93/225 (41%), Gaps = 4/225 (1%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T + + LCD GR E L DM +G Y L+ + A E+
Sbjct: 180 TPIIRGLCDR----GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 235
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E KG ++ + ++ EG V+ E + + + ++ G +
Sbjct: 236 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 295
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+ +++ +++ + C+P +VT+ ++ +CR G+ +A +V +M G +
Sbjct: 296 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 355
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
++ K GR+ DA + + M GC P+ Y +++ RA+
Sbjct: 356 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAE 400
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + GR L+ F M K + Y +L+ + + A EL E
Sbjct: 459 YNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEML 515
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+K ++ F LV + ++G++++ +E+VE M + +++G +K
Sbjct: 516 QKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSE 575
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+++ L+S G P VTY+SII R +A K+F +Q G V Y+ ++
Sbjct: 576 EALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKIL 635
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K A+ A M GC PN Y +L++
Sbjct: 636 LALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIE 671
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 102/247 (41%), Gaps = 32/247 (12%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + L ++ R + + ++M K + + + IC ++ A L ++
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN------------------------ 158
E G ++ + LV + +G V+ LE+ SM
Sbjct: 449 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAA 508
Query: 159 ---AELNISDCISCVI-----VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
AE+ DC V+ V+ F ++ A+++ EQ++ GC P +TY ++++
Sbjct: 509 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 568
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ +A ++ + G +V YSS++ + + R+ +A+++ ++ G P
Sbjct: 569 TKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKA 628
Query: 271 WIYNSLM 277
IYN ++
Sbjct: 629 VIYNKIL 635
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ ++ S+G P +I CR G S A +V ++ G V AY+++VA
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y + G++ A RL+A M P+ + Y ++
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPII 183
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 75/189 (39%), Gaps = 1/189 (0%)
Query: 42 AALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASL 101
AA L E + D P+ + +L + G E ++ M E G + Y +L
Sbjct: 506 AAAELLAEMLQKDCAPNVV-TFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTL 564
Query: 102 ICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
+ + A EL G+ D+ + ++ + E VE+ +++ +++ +
Sbjct: 565 LDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGM 624
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
I I+ KR A+ + ++S GC+P ++TY ++I +
Sbjct: 625 RPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRD 684
Query: 222 VFIEMQQKG 230
+ E+ +G
Sbjct: 685 LLRELCSRG 693
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 140/319 (43%), Gaps = 31/319 (9%)
Query: 4 QSKLHYYEKMKSA-GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
Q+ + E+M+ G ++ Y + +AF ++GD + E K + P+ M
Sbjct: 221 QAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARME--KEGVAPNVITM 278
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKE-----KGILEDPSVYASLICSFASIAEVKVAEEL 117
I+ L + GR L+FFR+ + +G + Y++L +F V +A EL
Sbjct: 279 NTII-GGLCRVGRVGAALEFFREKRTVWPEARG---NAVTYSTLASAFLHCNNVDMAMEL 334
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F E + G D ++ ++ + G + SMK A + +++ GF +
Sbjct: 335 FHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCR 394
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
++ A ++ E++ G P TY ++++ C+ G +S +++ M G VV
Sbjct: 395 KKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVT 454
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+ ++V Y K G+ +A+R+ M +PN IYN+L+D +
Sbjct: 455 FGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCK--------------- 499
Query: 298 AYNMAREFDMCVKFYNEFR 316
+RE D+ +K ++E R
Sbjct: 500 ----SREVDVAIKLFDEMR 514
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 109/262 (41%), Gaps = 34/262 (12%)
Query: 112 KVAEELFKEAEEKGMLRD----------LEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
K+ AE G LRD + +F L+ G + E+ SM++A +
Sbjct: 103 KLVRRFSSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASV 162
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG--CIPGQVTYASIINAYCRIGLYSKA 219
+++NG K A+KV +++ S G P ++++ C+IG +A
Sbjct: 163 KPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQA 222
Query: 220 EKVFIEMQQKGFDKC---VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+F++ + + C V Y+ + + + G I A ++VA+M+ +G PNV N++
Sbjct: 223 -IIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTI 281
Query: 277 MDMHGRAKNL-RQLE-----------------KYTTVISAYNMAREFDMCVKFYNEFRMN 318
+ R + LE Y+T+ SA+ DM ++ ++E +
Sbjct: 282 IGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADH 341
Query: 319 GGVIDRAMAGIMVGVFSKLSQI 340
G D M M+ ++ ++
Sbjct: 342 GHRPDAVMYFTMISGLTQAGRL 363
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 91/217 (41%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
MY + L ++GR + MK+ G D Y LI F ++ A EL +E
Sbjct: 349 MYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEM 408
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G+ D+ + L+ + G E++ M + S +V+G+ K
Sbjct: 409 KGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKT 468
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A++++ + P V Y ++I+ C+ A K+F EM++K V Y+++
Sbjct: 469 DEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNAL 528
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ A L+ +M+ + C PN + LM+
Sbjct: 529 LKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLME 565
>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
Length = 584
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 5/226 (2%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + H + L D+L KS R + + M++ GI D + +I F ++ A E
Sbjct: 92 PPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWE 151
Query: 117 LFKEAEEKGMLRDLEVFLKLVLM--YIEEGMVEKTLEVVESMK-NAELNISDCISCVIVN 173
+F+E + + + FL VL+ Y +E +++ LE++ M+ + I IV+
Sbjct: 152 IFQEMIKSNRCQP-DCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVD 210
Query: 174 GFSKRRAYWAAVK-VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
G + + A K + E ++ QGC P VTY S+I C+ A +++ M ++
Sbjct: 211 GLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQ 270
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+V+YS ++ K GR+ DA R+V +M+ GCE NV IY +L+D
Sbjct: 271 PTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLID 316
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 6/208 (2%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L D L KSG + +R MK G + YA+LI +F + A LF
Sbjct: 310 IYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI 369
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ L D+ ++ +V E ++ + M+ A ++ V+++G +
Sbjct: 370 RDYCPL-DVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERP 428
Query: 182 WAAVKVYEQL-ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A ++ E+L GC+ +TY ++I C +F EM+Q+G YS+
Sbjct: 429 EEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSA 484
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
++ +G I A L +M G P
Sbjct: 485 LIDRLLGSGEIGRAFDLCEEMLASGLSP 512
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 3/275 (1%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G V D YC ++ GD E+ LF E +++ DL P +Y L L + G
Sbjct: 249 GFVPDRVTYCSLINGLCAEGDVERALELFNEAQAK--DLKPDLV-VYNSLVKGLCRQGLI 305
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
L+ +M E G D Y +I + + A + +A KG L D+ F +
Sbjct: 306 LHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTM 365
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ Y + ++ L++VE M + ++NG K + +E++I +GC
Sbjct: 366 IDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGC 425
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P +TY +I +C+I +A V + M Q G +++++++ + + G + A
Sbjct: 426 RPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYL 485
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
L K+ KG +N L+ + N++ EK
Sbjct: 486 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 520
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 3/229 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L K + E ++ R M +G + D Y ++I + ++ A EL K+A
Sbjct: 187 YNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAI 246
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + D + L+ EG VE+ LE+ + +L + +V G ++
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLIL 306
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++V +++ GC P TY +IN C++G S A V + KG+ V +++M+
Sbjct: 307 HALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMI 366
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQ 288
Y K ++ A++LV +M G P+ YNS+++ G+AK + +
Sbjct: 367 DGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE 415
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 125/303 (41%), Gaps = 37/303 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M SAG+ D+ + +++F G L R D+ P + Y +
Sbjct: 33 YVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLA---YCTVVRG 89
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L G ++ F +M + + D + + +++ + ++ + L + ++GM +
Sbjct: 90 LYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVN 149
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMK-------------------------------- 157
+ E G +E+ + +VESM
Sbjct: 150 KFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRR 209
Query: 158 --NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
N D I++G+ KR A ++ + I +G +P +VTY S+IN C G
Sbjct: 210 MMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGD 269
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+A ++F E Q K +V Y+S+V + G I A++++ +M GC P++W YN
Sbjct: 270 VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNI 329
Query: 276 LMD 278
+++
Sbjct: 330 VIN 332
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 92/208 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + L K+G+A E+ + F +M KG + Y LI +F I +++ A +
Sbjct: 397 YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMS 456
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G++ D F L+ + G ++ + + + + + +++ +S +
Sbjct: 457 QDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQ 516
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K++ ++IS+G P TY +++ C+ +A EM KGF + + ++
Sbjct: 517 MAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVL 576
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
R+ +A+ ++ M G P V
Sbjct: 577 NSLAMNHRVSEAVAIIHIMVRMGVVPEV 604
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
GC P Y +I++A + +A KV++ M G ++ + + TGR A
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
+RL+ + +GC+ Y +++ HG + R L
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHL 102
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A KVY +++S G P T+ I ++C G A ++ + ++G D +AY ++V
Sbjct: 29 AHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVR 88
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G DA L +M + P+V +N+++
Sbjct: 89 GLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVL 122
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 69/256 (26%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + Y + D+L + + K + M G+ D + I SF VA
Sbjct: 7 PPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALR 66
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L + E+G ++ C +V G
Sbjct: 67 LLRSLPERG-----------------------------------CDVKPLAYCTVVRGLY 91
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD---- 232
+ A ++++++ + P T+ ++++A C+ G ++ + ++ ++G
Sbjct: 92 AHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKF 151
Query: 233 KC------------------------------VVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
C VV Y++++ K ++++A + + +M
Sbjct: 152 TCNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMM 211
Query: 263 PKGCEPNVWIYNSLMD 278
+GC P+ + YN+++D
Sbjct: 212 NQGCIPDDFTYNTIID 227
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 134/279 (48%), Gaps = 12/279 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ + SA + D Y ++ + ++ D K + E + L S +Y +L
Sbjct: 119 FDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKL---SIVVYNVLIHG 175
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KS R +E L+ + +KG+ A+++ + E AE LFKE EKG+ +
Sbjct: 176 LCKSRRIWEALEIKNCLMQKGL------EANVVTYYGKFNE---AELLFKEMGEKGLCAN 226
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G ++ + ++ M A + + ++NG+ K AA ++
Sbjct: 227 HITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFD 286
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++I +G P VTY S+I+ YC G + KA KV+ EM KG ++++++ +
Sbjct: 287 EMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRAN 346
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ +A+RL +MK + P+ YN +++ H R+ N+ +
Sbjct: 347 MMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISE 385
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 131/314 (41%), Gaps = 38/314 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G+ + Y ++++F + G+ + + ++ T + Y L +
Sbjct: 215 FKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFT---VYPYNSLING 271
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G A +F +M +KG+ Y SLI + + E A +++ E KG+ +
Sbjct: 272 YCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPN 331
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F ++ M+ + + + MK ++ S+ V++ G + A + +
Sbjct: 332 TYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLD 391
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ +G +P TY +I+ C +G S+A++ ++ + + YS++V Y K G
Sbjct: 392 EMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEG 451
Query: 250 RIRDAMR-----------------------------------LVAKMKPKGCEPNVWIYN 274
R +DA+ L+ +M G P+ IY
Sbjct: 452 RFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYT 511
Query: 275 SLMDMHGRAKNLRQ 288
+++D H +A NL++
Sbjct: 512 NMIDRHSKAGNLKE 525
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 135/348 (38%), Gaps = 72/348 (20%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M + GI ++ + I+ + + LF E + RK+ PS Y ++ +
Sbjct: 320 YNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKI--MPSEV-TYNVMIEG 376
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL------------ 117
+SG E +M KG + D Y LI S+ V A+E
Sbjct: 377 HCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLN 436
Query: 118 ----------------FKEAE-------EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
FK+A E+G+ DL + L+ E +++
Sbjct: 437 NMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLK 496
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M N L I +++ SK A +++ ++ +GC+P VTY ++IN C+ G
Sbjct: 497 EMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAG 556
Query: 215 LYSKAEKV------------------FIE-------MQQ---------KGFDKCVVAYSS 240
L KAE + F++ M++ KGF V+Y+
Sbjct: 557 LMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNI 616
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
++ + + G+I +A +L+ M P+ Y++++ + NL++
Sbjct: 617 LIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQE 664
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 25/252 (9%)
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
R MK+ ++ + ++L+ LF + + D+ ++ +V E
Sbjct: 85 RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
K E++ M+ + +S + V+++G K R W A+++ L+ +G VTY
Sbjct: 145 KDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY 204
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
G +++AE +F EM +KG + YS ++ + + G + +A+ + KM
Sbjct: 205 ---------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTK 255
Query: 264 KGCEPNVWIYNSLMDMHGRAKN----------------LRQLEKYTTVISAYNMAREFDM 307
E V+ YNSL++ + + N + YT++IS Y E+
Sbjct: 256 ASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHK 315
Query: 308 CVKFYNEFRMNG 319
K YNE G
Sbjct: 316 AFKVYNEMTAKG 327
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 99/219 (45%), Gaps = 3/219 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL D + + ++M G+ D +Y ++I + +K A L+
Sbjct: 475 YAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMV 534
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G L ++ + L+ + G+++K + + +++ + ++ ++
Sbjct: 535 DEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNME 594
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AV+++ ++ +G + V+Y +I +CR+G +A K+ M + YS+++
Sbjct: 595 KAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTII 653
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
K +++A++L M KG +P+ Y+ L +HG
Sbjct: 654 YEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFL--VHG 690
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 105/257 (40%), Gaps = 4/257 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G+ +D CY +++ + D+ + L E + L P + +Y + D K
Sbjct: 463 MVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNH--GLRPDAV-IYTNMIDRHSK 519
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G E + M ++G L + Y +LI + AE L KE + +
Sbjct: 520 AGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHIT 579
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ + G +EK +++ +M L + + +++ GF + A K+ +
Sbjct: 580 YGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYN-ILIRGFCRLGKIEEATKLLHGMT 638
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+P +TY++II C+ +A K++ M KG +AYS +V G +
Sbjct: 639 DNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELE 698
Query: 253 DAMRLVAKMKPKGCEPN 269
A L +M +G N
Sbjct: 699 KAFELRDEMIRRGMRSN 715
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 113/231 (48%), Gaps = 1/231 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L K+ RA E +M G + D Y +LI F + A +F++
Sbjct: 57 YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 116
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
+G D+ + L+ +EG +++ +++ M + + + ++ +++GF +
Sbjct: 117 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 176
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+ + E++ G P VTY +++N +C++ A + +M +KG VV ++S+
Sbjct: 177 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSL 236
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+ + R+ DA+ ++ +M+ K C P V+ YN+++D + R L + K+
Sbjct: 237 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF 287
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 6/277 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M +G + D Y ++ F K S+ +F + +R Y L D L
Sbjct: 78 EEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR---PDVVTYSCLIDGL 134
Query: 71 GKSGRAFEILKFF-RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K GR E + F R +K + + Y SLI F + ++ A L + E G D
Sbjct: 135 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 194
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + ++ +++ M L + +++G + AV +
Sbjct: 195 VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILG 254
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + C P TY +I++ YCR+ +A K +E + VV+++ M+ K
Sbjct: 255 EMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVN 312
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
R +AM LV + + + C P+V +Y +++D+ R K +
Sbjct: 313 RSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+ RR AAV+ E+ +P VTY S+I+ C+ S+A + EM G
Sbjct: 35 WPGRRGCGAAVQDAEE------VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPD 88
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKN------ 285
+ Y++++ + K+ + DA+R+ ++ +G P+V Y+ L+D GR K
Sbjct: 89 IFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFG 148
Query: 286 --------LRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
+ Y ++IS + + D + G D ++ F KL
Sbjct: 149 RMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKL 208
Query: 338 SQIEE 342
+++++
Sbjct: 209 ARLDD 213
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 139/289 (48%), Gaps = 17/289 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS-----STH 61
L + KMK GI Y +M V+A+F++ R ++ S
Sbjct: 189 LWVWRKMKENGIEPTLYTYNFLMNGL--------VSAMFVDSAERVFEVMESGRIKPDIV 240
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + K+G+ + ++ RDM+ +G D Y ++I + + ++ L++E
Sbjct: 241 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM 300
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRR 179
+EKG+ F ++ +EG + + V E+M K ++ N++ I V+++G++K
Sbjct: 301 DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA--IYTVLIDGYAKSG 358
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+ A+++ ++I +G P VTY+ ++N C+ G +A F + G + YS
Sbjct: 359 SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYS 418
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
S++ GK GR+ +A RL +M KGC + + YN+L+D + + + +
Sbjct: 419 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDE 467
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 131/340 (38%), Gaps = 54/340 (15%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
CY +++ D +++ F+ E +K + P + L S GK G E+L +
Sbjct: 136 CYVSLVDVLALAKDVDRIR--FVSSEIKKFEF-PMTVSAANALIKSFGKLGMVEELLWVW 192
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
R MKE GI Y L+ S V AE +F+ E + D+ + ++ Y +
Sbjct: 193 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 252
Query: 144 GMVEKTLEVVESMKN------------------AELNISDCIS----------------- 168
G +K +E + M+ A+ + C++
Sbjct: 253 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 312
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ G K V+E +I +G P Y +I+ Y + G A ++ M
Sbjct: 313 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 372
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+GF VV YS +V K GR+ +A+ + G N Y+SL+D G+A + +
Sbjct: 373 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 432
Query: 289 LEK----------------YTTVISAYNMAREFDMCVKFY 312
E+ Y +I A+ R+ D + +
Sbjct: 433 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 472
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 13/263 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTHMYKILC 67
+E M G + Y +++ + K G E L E K D+ Y ++
Sbjct: 332 FENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVV-----TYSVVV 386
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ L K+GR E L +F + G+ + Y+SLI V AE LF+E EKG
Sbjct: 387 NGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCT 446
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE-LNISDCISCVIVNGFSKRRAYWAAVK 186
RD + L+ + + V++ + + + M+ E + + ++++G K A+K
Sbjct: 447 RDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALK 506
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--FDKCVVAYSSMVAM 244
+++ +I +G P + ++ C G ++A K+ E+ G D A M+
Sbjct: 507 LWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD---AACEDMINT 563
Query: 245 YGKTGRIRDAMRLVAKMKPKGCE 267
K GRI++A +L + +G E
Sbjct: 564 LCKAGRIKEACKLADGITERGRE 586
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/299 (18%), Positives = 117/299 (39%), Gaps = 39/299 (13%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
+Q + M++ G D Y +++A Y D AL+ E + + + + P H
Sbjct: 255 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPP---HA 311
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ ++ L K G+ E F +M KG + ++Y LI +A V+ A L
Sbjct: 312 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 371
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG-------- 174
++G D+ + +V + G VE+ L+ + + L I+ +++G
Sbjct: 372 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 431
Query: 175 ---------------------------FSKRRAYWAAVKVYEQLISQ-GCIPGQVTYASI 206
F+K R A+ +++++ + GC TY +
Sbjct: 432 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 491
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
++ + +A K++ M KG + ++ +G++ A +++ ++ P G
Sbjct: 492 LSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMG 550
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 139/289 (48%), Gaps = 17/289 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS-----STH 61
L + KMK GI Y +M V+A+F++ R ++ S
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLMNGL--------VSAMFVDSAERVFEVMESGRIKPDIV 258
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + K+G+ + ++ RDM+ +G D Y ++I + + ++ L++E
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM 318
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRR 179
+EKG+ F ++ +EG + + V E+M K ++ N++ I V+++G++K
Sbjct: 319 DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA--IYTVLIDGYAKSG 376
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+ A+++ ++I +G P VTY+ ++N C+ G +A F + G + YS
Sbjct: 377 SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYS 436
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
S++ GK GR+ +A RL +M KGC + + YN+L+D + + + +
Sbjct: 437 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDE 485
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 131/340 (38%), Gaps = 54/340 (15%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
CY +++ D +++ F+ E +K + P + L S GK G E+L +
Sbjct: 154 CYVSLVDVLALAKDVDRIR--FVSSEIKKFEF-PMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
R MKE GI Y L+ S V AE +F+ E + D+ + ++ Y +
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 144 GMVEKTLEVVESMKN------------------AELNISDCIS----------------- 168
G +K +E + M+ A+ + C++
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ G K V+E +I +G P Y +I+ Y + G A ++ M
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+GF VV YS +V K GR+ +A+ + G N Y+SL+D G+A + +
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 289 LEK----------------YTTVISAYNMAREFDMCVKFY 312
E+ Y +I A+ R+ D + +
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 13/263 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTHMYKILC 67
+E M G + Y +++ + K G E L E K D+ Y ++
Sbjct: 350 FENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVV-----TYSVVV 404
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ L K+GR E L +F + G+ + Y+SLI V AE LF+E EKG
Sbjct: 405 NGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCT 464
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE-LNISDCISCVIVNGFSKRRAYWAAVK 186
RD + L+ + + V++ + + + M+ E + + ++++G K A+K
Sbjct: 465 RDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALK 524
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--FDKCVVAYSSMVAM 244
+++ +I +G P + ++ C G ++A K+ E+ G D A M+
Sbjct: 525 LWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD---AACEDMINT 581
Query: 245 YGKTGRIRDAMRLVAKMKPKGCE 267
K GRI++A +L + +G E
Sbjct: 582 LCKAGRIKEACKLADGITERGRE 604
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/299 (18%), Positives = 117/299 (39%), Gaps = 39/299 (13%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
+Q + M++ G D Y +++A Y D AL+ E + + + + P H
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPP---HA 329
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ ++ L K G+ E F +M KG + ++Y LI +A V+ A L
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG-------- 174
++G D+ + +V + G VE+ L+ + + L I+ +++G
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 175 ---------------------------FSKRRAYWAAVKVYEQLISQ-GCIPGQVTYASI 206
F+K R A+ +++++ + GC TY +
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
++ + +A K++ M KG + ++ +G++ A +++ ++ P G
Sbjct: 510 LSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMG 568
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 3/168 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M G DS CY +++AF K ++ ALF E + + + Y IL
Sbjct: 455 FEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE--EGCDQTVYTYTILLSG 512
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K R E LK + M +KGI + + +L +V A ++ E G++ D
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD 572
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
++ + G +++ ++ + + + I V++N K
Sbjct: 573 AAC-EDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRK 619
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 129/271 (47%), Gaps = 6/271 (2%)
Query: 11 EKMKSA-GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
E+M+S G ++ Y + AF + G+ L + E ++ TP++ + I+
Sbjct: 234 ERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERV--TPNAVTLNTIV-GG 290
Query: 70 LGKSGRAFEILKFFRDMKE--KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
L GR L+FFR+ + + Y++L+ +F V VA ELF E ++G
Sbjct: 291 LCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNS 350
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D ++ ++ + G ++ + SMK A + +++ GF +R+ A ++
Sbjct: 351 PDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYEL 410
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ G P TY ++++ C+ G + +++ +M G VV + +++ Y K
Sbjct: 411 LGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCK 470
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G+I +A+R+ M G +PN IYN+L+D
Sbjct: 471 VGQIDEALRIFRSMDESGIQPNTVIYNTLID 501
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 97/237 (40%), Gaps = 3/237 (1%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
MY + L ++GR + MK+ G D Y LI F + A EL E
Sbjct: 355 MYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEM 414
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+E G+ D+ + L+ + G E++ M + S +++G+ K
Sbjct: 415 KEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQI 474
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A++++ + G P V Y ++I+ C+ S A ++F EM++K V ++++
Sbjct: 475 DEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNAL 534
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEKYTTV 295
+ A L+ M+ C P+ + LM+ + G L+ ++ T
Sbjct: 535 LKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDRLKHFMQHDTT 591
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 138/368 (37%), Gaps = 53/368 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ + + D+ + +++A + GD + LF R + P+ Y IL L
Sbjct: 126 DSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLF--ASMRDASVRPNVV-TYGILVKGL 182
Query: 71 GKSGRAFEILKFFRDM--KEKGILEDPSVYASLI---CSFASIAE-VKVAEELFKEAEEK 124
K+GR + L M E + D + +++ C + + VK EE +
Sbjct: 183 CKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVH-- 240
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG---------- 174
G + + L + G V E+V M+ + + IV G
Sbjct: 241 GCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAA 300
Query: 175 ---FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
F ++R W + VTY++++ A+ A ++F EM +G
Sbjct: 301 LEFFREKRTVWPEARG-----------NAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGN 349
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ--- 288
+ Y +M++ + GR+ DA + MK G + + YN L+ R K L +
Sbjct: 350 SPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYE 409
Query: 289 -------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA-GIMVGVF 334
+ Y T++S A +F + + ++GG + G ++ +
Sbjct: 410 LLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKM-IDGGCRPSVVTFGTLIHGY 468
Query: 335 SKLSQIEE 342
K+ QI+E
Sbjct: 469 CKVGQIDE 476
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF---LECESRKLDLTPSSTHMYKILCD 68
+MK AG+ D Y ++ K GD V L ++ R S + L
Sbjct: 413 EMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRP------SVVTFGTLIH 466
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G+ E L+ FR M E GI + +Y +LI + +A ELF E EK +
Sbjct: 467 GYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPA 526
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
++ F L+ ++ M EK E+++ M+
Sbjct: 527 NVTTFNALLKGLRDKNMPEKAFELMDLMR 555
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 122/272 (44%), Gaps = 19/272 (6%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
++ R E F M +G D Y +LI F +V EL E +G D+
Sbjct: 156 RARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIV 215
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ ++ + G + +++ E M A I+ ++ G+ + A+++ ++
Sbjct: 216 TYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAIT---YNSLIGGYCRAGDMDEAIRLLGKM 272
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ C P VTY ++++A+C++G A ++F +M VV ++S+V GR+
Sbjct: 273 VDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 332
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTV 295
DA+ L+ ++ +GC P ++ YN ++D + +A +R+ E+ Y +
Sbjct: 333 EDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNIL 392
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
++ A D +++ ++ GG ++A
Sbjct: 393 VAGCCRAGRTDQALQYLDQLNSEGGPCPTSVA 424
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 19/281 (6%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D P Y L L K+ R + ++ ++M + D + ++ S V
Sbjct: 33 DAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDD 92
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A EL +E +GM + + LV + +++ + +VE+M + I+
Sbjct: 93 ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIIT 152
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
GF + R A EQ++++GC P +TY ++I +C+ + ++ E+ ++GF
Sbjct: 153 GFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTP 212
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL----RQL 289
+V YS+++ K GR+RDA+ + +M C P YNSL+ + RA ++ R L
Sbjct: 213 DIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLL 269
Query: 290 EK------------YTTVISAYNMAREFDMCVKFYNEFRMN 318
K YTT++SA+ D + + + N
Sbjct: 270 GKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVAN 310
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 123/298 (41%), Gaps = 14/298 (4%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
T ++ ++ L ++GR L +R M + D Y L+ + ++ A ++
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+E + D +V V+ E+VE M + + + +V+G K
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
AV + E + +GC P VTY SII +CR +A +M +G ++
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------ 291
Y++++ + K+ + + L+ ++ +G P++ Y++++D +A LR
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 241
Query: 292 -------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y ++I Y A + D ++ + + D ++ F K+ ++++
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDD 299
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 117/260 (45%), Gaps = 11/260 (4%)
Query: 11 EKMKSAGIVLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
E ++ G ++D C Y +M AF K+G + LF + + KL +P +
Sbjct: 264 EAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKL--SPDVV-TFT 320
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L D L GR + L+ ++ +G Y ++ + +V+ AEEL + +
Sbjct: 321 SLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSR 380
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN--AELNISDCISCVIVNGFSKRRAYW 182
G + + + LV G ++ L+ ++ + + S + +I++ +
Sbjct: 381 GFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTD 440
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AV+ YE++I +G +P T+A+++ A C+ +A ++ EM + G ++V
Sbjct: 441 DAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVV 500
Query: 243 AMYGKTGRIRDAMRLVAKMK 262
+ Y + G I+ A L ++++
Sbjct: 501 SAYCRAGMIQKADELASELR 520
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 2/240 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K GR + + F+ M + D + SL+ ++ A EL +E
Sbjct: 284 YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEIT 343
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G + + +V Y + V K E+V ++ + ++V G +
Sbjct: 344 RRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD 403
Query: 183 AAVKVYEQLISQG--CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A++ +QL S+G C YA I++A CR G A + + EM Q+G+ +++
Sbjct: 404 QALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFAT 463
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
+V K + + A L+ +M G P ++++ + RA +++ ++ + + Y
Sbjct: 464 VVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLYT 523
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 3/239 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++EKMK+ GI S Y +++ F K EK L E + + P++ Y L D
Sbjct: 393 WFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAA---YCSLID 449
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
SLG++ R + F+++KE VYA +I F + + A +LF E ++ G
Sbjct: 450 SLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSP 509
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ I GM+++ ++ +M+ +I+NG +K A++++
Sbjct: 510 DVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMF 569
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ +P V+Y +I++ R G++ A K+ EM+ KGF+ + YSS++ GK
Sbjct: 570 TKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGK 628
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 134/303 (44%), Gaps = 15/303 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++MK G+ Y I+ ++K+ E AAL L E + P+ Y L
Sbjct: 253 FDEMKENGLHPTEKIYTTILAMYFKLNKVE--AALRLVEEMKGKGCAPT-VFTYTELIKG 309
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LGK GR + F +M + G D + +LI ++ A +LF + + +
Sbjct: 310 LGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPN 369
Query: 130 LEVFLKLVLMYIE-EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + ++ E + + E MK + S ++++GF K A+ +
Sbjct: 370 VVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLL 429
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ +G P Y S+I++ R Y A ++F E+++ Y+ M+ +G
Sbjct: 430 EEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNC 489
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM----------DMHGRAKNLRQLEKYTTVISA 298
GR+ DA+ L +MK GC P+V+ YN+LM + H +N+R+ T I +
Sbjct: 490 GRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRE-NGCTPDIKS 548
Query: 299 YNM 301
+N+
Sbjct: 549 HNI 551
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 20/303 (6%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S+T+M I C L +SG E+ + +DM P+ ++ ++ V A +
Sbjct: 124 STTYMALIRC--LEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSV 181
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFS 176
F + + + V+ L+LM + EG EK E+ + + D I+ +++ F
Sbjct: 182 FYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFG 241
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K Y A ++++++ G P + Y +I+ Y ++ A ++ EM+ KG V
Sbjct: 242 KLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVF 301
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
Y+ ++ GK GR+ DA L M GC+P+V + N+L+++ GRA L K
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
Query: 292 -----------YTTVISA-YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
Y TVI A + ++ + + NG I++ F K ++
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR 421
Query: 340 IEE 342
+E+
Sbjct: 422 VEK 424
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 120/316 (37%), Gaps = 56/316 (17%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L + KM S + Y +++A ++ AAL+ E + + + PSS Y
Sbjct: 352 EDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFE-KMKANGIAPSS-FTY 409
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL D K+ R + L +M EKG P+ Y SLI S + A ELF+E +E
Sbjct: 410 AILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKE 469
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
V+ V++ F
Sbjct: 470 NCGRSSARVY-----------------------------------AVMIKHFGNCGRLSD 494
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV ++ ++ GC P TY ++++ R G+ +A + M++ G + +++ ++
Sbjct: 495 AVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILN 554
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
KTG + A+ + KMK P+ YN T++S + A
Sbjct: 555 GLAKTGGPKRAIEMFTKMKESEIMPDAVSYN-------------------TILSCLSRAG 595
Query: 304 EFDMCVKFYNEFRMNG 319
F+M K E ++ G
Sbjct: 596 MFEMAAKLMREMKLKG 611
>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
Length = 1152
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 4/273 (1%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D Y +M + K+G + + LF + R D+ PS Y L D L +SG
Sbjct: 410 DVVSYNTLMHGYIKMGKFVEASLLFDDL--RAGDIHPSIV-TYNTLIDGLCESGNLEGAQ 466
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ +M + I D Y +L+ F + +A E++ E KG+ D + +
Sbjct: 467 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGE 526
Query: 141 IEEGMVEKTLEVVESMKNAELNISD-CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G +K + E M + + D I V ++G K A++ ++ G +P
Sbjct: 527 LRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD 586
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY ++I Y G + A ++ EM +K V+ Y ++ + K GR+ A +
Sbjct: 587 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYST 646
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+MK +G PNV +N+L+ +A N+ + +Y
Sbjct: 647 EMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY 679
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 145/358 (40%), Gaps = 61/358 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE M GI+ + ++++ +K GD E+V ++LE + R ++ + + Y IL +
Sbjct: 263 YETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVT---YNILING 319
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDP---------------------------------- 95
K+G+ E +F DM+ G P
Sbjct: 320 FSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPT 379
Query: 96 -SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG-MVEKTLEVV 153
S Y IC+ + A EL D+ + L+ YI+ G VE +L +
Sbjct: 380 TSTYNIYICALCDFGRIDDARELLSSMAAP----DVVSYNTLMHGYIKMGKFVEASL-LF 434
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ ++ +++ S +++G + A ++ E++ +Q P +TY +++ + +
Sbjct: 435 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 494
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE-PNVWI 272
G S A +V+ EM +KG AY++ + G A RL +M P++ I
Sbjct: 495 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 554
Query: 273 YNSLMDMHGRAKNL-------RQLEK---------YTTVISAYNMAREFDMCVKFYNE 314
YN +D + NL R++ + YTTVI Y +F M Y+E
Sbjct: 555 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 612
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 6/171 (3%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A +++ E G++ + F ++ + G +E+ ++ MK + S+ +++N
Sbjct: 259 ASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILIN 318
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
GFSK A + + + G ++ +I YC+ GL+ A V EM G
Sbjct: 319 GFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYP 378
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
Y+ + GRI DA L++ M P+V YN+L MHG K
Sbjct: 379 TTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTL--MHGYIK 423
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Query: 139 MYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+Y ++ M EK L E M K ++ +C +++ R A VYE +I G
Sbjct: 214 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNC--NIVLKVLRDSRMMNKASAVYETMIEHGI 271
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
+P +T+ +++++ + G + +K+++EM+++ + V Y+ ++ + K G++ +A R
Sbjct: 272 MPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR 331
Query: 257 LVAKMKPKGCEPNVWIYNSLMD 278
M+ G + +N L++
Sbjct: 332 FHGDMRRSGFAVTPYSFNPLIE 353
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 8/223 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE---CESRKLDLTPSSTHMYKIL 66
Y++M GI D Y ++GDS+K L E + DLT +Y +
Sbjct: 504 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLT-----IYNVR 558
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K G + ++F R + G++ D Y ++I + + K+A L+ E K +
Sbjct: 559 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 618
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + + G +E+ + MK + + ++ G K A +
Sbjct: 619 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 678
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++ +G P + +Y +I+ C + + K++ EM K
Sbjct: 679 YLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 721
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 132/286 (46%), Gaps = 4/286 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
S + +++MK G+ + Y +M ++K+G E+ L E +R+ LT Y
Sbjct: 241 DSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLT---VFTY 297
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L LGKSGR + +++M + G D + +LI ++ A +LF E +
Sbjct: 298 TELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKL 357
Query: 124 KGMLRDLEVFLKLVLMYIE-EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++ + ++ E + + + E MK + S ++++G+ K
Sbjct: 358 LNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVE 417
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + E++ +G P Y S+IN Y A ++F E+++ Y+ M+
Sbjct: 418 KALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMI 477
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+GK GR+ +A+ L +MK GC P+V+ YN+LM RA+ + +
Sbjct: 478 KHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDE 523
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 144/321 (44%), Gaps = 21/321 (6%)
Query: 40 KVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDM-KEKGILEDPSVY 98
+ ++F + + RK T S+ Y + L + G ++ + + +M E D Y
Sbjct: 171 RALSVFYQVKGRKCRPTAST---YNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTY 227
Query: 99 ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
++LI +FA + A LF E +E G+ +++ L+ +Y + G VE+ L +V+ M+
Sbjct: 228 SALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRA 287
Query: 159 AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK 218
++ ++ G K A Y+ ++ GC P V ++IN R
Sbjct: 288 RRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRD 347
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
A K+F EM+ VV Y++++ +++ + +A +MK G P+ + Y+ L+
Sbjct: 348 AIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILI 407
Query: 278 DMHGRA----KNLRQLEK------------YTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
D + + K L LE+ Y ++I+ +A+ +D+ + + E + N G
Sbjct: 408 DGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGC 467
Query: 322 IDRAMAGIMVGVFSKLSQIEE 342
+ +M+ F K ++ E
Sbjct: 468 SSARVYAVMIKHFGKCGRLNE 488
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 125/281 (44%), Gaps = 2/281 (0%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++MK + Y I+++ ++ A+ + E +K + PSS Y IL D
Sbjct: 352 FDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFE-RMKKDGIVPSS-FTYSILIDG 409
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ R + L +M EKG P+ Y SLI + VA ELF+E +E
Sbjct: 410 YCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSS 469
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V+ ++ + + G + + + + MK ++ G + A ++
Sbjct: 470 ARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFR 529
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ GC P ++ I+N R G A ++F +M+ VV++++++ + G
Sbjct: 530 TMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAG 589
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+A +L+ +M KG + ++ Y+S+++ G+ + + +E
Sbjct: 590 LFEEAAKLMQEMSSKGFQYDLITYSSILEAVGKVDDCKMVE 630
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 111/232 (47%), Gaps = 3/232 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S+T+M I C L + E+ K +DM + P+ + ++ V A +
Sbjct: 118 STTYMALIRC--LDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSV 175
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFS 176
F + + + + ++LM ++EG EK E+ M + D ++ +++ F+
Sbjct: 176 FYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFA 235
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K +A+++++++ G P Y +++ Y ++G +A + EM+ + V
Sbjct: 236 KLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVF 295
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
Y+ ++ GK+GR+ DA M GC+P+V + N+L+++ GR+ +LR
Sbjct: 296 TYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRD 347
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Query: 110 EVKVAEELFKEA-EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
EV V + FK A + + D ++ L+ E M + + ++ M ++
Sbjct: 97 EVSVKIQFFKWAGKRRNFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAEL 156
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM-- 226
IV K + A+ V+ Q+ + C P TY SII + G + K +++ EM
Sbjct: 157 SEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCS 216
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ F V YS++++ + K R A+RL +MK G +P IY +LM ++
Sbjct: 217 EVHCFPD-TVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIY 269
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 152/353 (43%), Gaps = 25/353 (7%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM-YKI 65
L ++ M+ G + ++ Y QI++ + + D EK +F ++ L PS T + Y
Sbjct: 392 LKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVF----NKMLKDGPSPTVVTYNT 447
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L K G +F MKE D Y LI F ++ A F E + G
Sbjct: 448 LIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCG 507
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ + + ++ Y +EG ++ L + E M+ + S I++G SK + A
Sbjct: 508 ISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAE 567
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K ++ QG P +TY S+IN C+ + A K+F EM++K Y+S++
Sbjct: 568 KFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGL 627
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL------------- 289
+ G++ A RL GCEP + Y++L+ GR+ QL
Sbjct: 628 CQEGKVDAAERLTE----NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSM 683
Query: 290 EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
E Y +++ A+ + + D ++ +N + G + +++ +S+ EE
Sbjct: 684 EIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEE 736
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 5/261 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y I+ ++ G E ++ + K L P+ T Y L + L GR LK F
Sbjct: 340 YTAIISGLFRAGKMELAIGMYHK--MLKEGLVPN-TVTYNALINELCTEGRFGIALKIFD 396
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M+ G L + Y +I + +++ A +F + + G + + L++ ++ G
Sbjct: 397 WMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRG 456
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ + MK + + C +++GF K +A + +++ G P Q TY
Sbjct: 457 YLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYT 516
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++I+ YC+ G A +F M++ G + Y+++++ K R +A + AKM +
Sbjct: 517 AMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ 576
Query: 265 GCEPNVWIYNSLMDMHGRAKN 285
G +PN Y SL++ G KN
Sbjct: 577 GLQPNTITYTSLIN--GLCKN 595
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 89/186 (47%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ +L+ V A+ ++ + G+ L F ++ + ++G V++ + V +
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIF 224
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+L ++ G + R A +V+++++ GC P VTY+++IN C G
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIG 284
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A + EM +KG + V Y+ ++ GR+ DA+ LV M KGC P+V Y +++
Sbjct: 285 EAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAII 344
Query: 278 DMHGRA 283
RA
Sbjct: 345 SGLFRA 350
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 96/244 (39%), Gaps = 14/244 (5%)
Query: 47 ECESRKLD-------------LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
C +RKLD P+S Y L + L GR E + +M EKGI
Sbjct: 242 HCRNRKLDKAFEVFDRMVKDGCNPNSV-TYSTLINGLCNEGRIGEAMDMLEEMTEKGIEP 300
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
Y I S I V A L + +KG ++ + ++ G +E + +
Sbjct: 301 TVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMY 360
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M L + ++N + A+K+++ + G + TY II +
Sbjct: 361 HKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGM 420
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
KA VF +M + G VV Y++++ K G + +A R + MK CEP+ Y
Sbjct: 421 DDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTY 480
Query: 274 NSLM 277
L+
Sbjct: 481 CELI 484
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 111/270 (41%), Gaps = 8/270 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+YE +K GI + Y +++ + K G + +LF E +S Y +
Sbjct: 500 FYEMLK-CGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCS---ASIETYNAIIS 555
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K R E KF M E+G+ + Y SLI +A ++F E E+K L
Sbjct: 556 GLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLP 615
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ +EG V+ + E+ ++ +V+G + A ++
Sbjct: 616 NAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYS----TLVSGLCREGRSNEASQLV 671
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E + +G P Y S++ A+C+ A ++F M KGF + Y ++
Sbjct: 672 ENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGV 731
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
R +A+ + + K ++ ++ L+D
Sbjct: 732 SRAEEALNIFQSLLKKQWNSDLIVWTVLVD 761
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L + GR+ E + +MKEKG+ +Y SL+ + +V A E+F
Sbjct: 651 YSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMA 710
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG L ++ L+ E+ L + +S+ + N + V+V+G +
Sbjct: 711 VKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSD 770
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
+K + S+ C P TY + ++G
Sbjct: 771 LCMKFLYLMESRNCTPSLHTYIILARELSKVG 802
>gi|295831077|gb|ADG39207.1| AT5G42310-like protein [Capsella grandiflora]
Length = 185
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 95/170 (55%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A + KE E + + VF +L+ Y + G +KT +V++ MK+ + V+++
Sbjct: 4 ARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 63
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
F K A+ +++++S+G P +VT+ ++I+ +C+ G + AE +F M+++G
Sbjct: 64 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRGCLP 123
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
C Y+ M+ YG R D RL+ KMK +G PNV + +L+D++G++
Sbjct: 124 CATTYNIMINSYGDQERWDDMKRLLXKMKSQGILPNVVTHTTLVDVYGKS 173
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M AGI D+ Y +++ + K D K L E ++RKL +P + Y +L
Sbjct: 404 FNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT---YSVLISG 460
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L S + + M G+ + +Y +LI ++ + ++A EL K G+L D
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + L++ VE+ ++ M + + +N +SK A + ++
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK 580
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++S G +P V Y +I +C +G +A F M +KG + AYS+++ K G
Sbjct: 581 DMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNG 640
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ ++AM + K G P+V++YNSL+
Sbjct: 641 KTKEAMGVFLKFLKTGVVPDVFLYNSLI 668
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 136/279 (48%), Gaps = 6/279 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y++ M S+GIV ++ Y +++ +G++ + + F +C K L P Y +
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTF-KCMLEK-GLIPD-IRAYSAIIH 634
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
SL K+G+ E + F + G++ D +Y SLI F +++ A +L+ E G+
Sbjct: 635 SLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINP 694
Query: 129 DLEVFLKLV--LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ V+ L+ Y + G + + ++ + M + ++ I C++++G K A+
Sbjct: 695 NIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 754
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ + Q + + S+I+++C+ G +A ++F +M K +V Y+ ++ YG
Sbjct: 755 LFHE-AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYG 813
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
K + +A +L M+ + PN Y SL+ + + N
Sbjct: 814 KAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 852
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 130/270 (48%), Gaps = 6/270 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ K G+V D Y ++ F K GD EK + L+ E ++ + +Y L +
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGIN---PNIVVYNTLIND 705
Query: 70 LG--KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
G KSG E K F +M KGI D +Y LI ++ A LF EA++K +
Sbjct: 706 YGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-V 764
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
L F L+ + + G V + E+ + M + +L + ++++ + K A ++
Sbjct: 765 GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQL 824
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ + ++ IP +TY S++ +Y +IG K +F +M+ +G +AY M + Y K
Sbjct: 825 FLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCK 884
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G+ +A++L+ K +G + ++++L+
Sbjct: 885 EGKSLEALKLLNKSLVEGIKLEDDVFDALI 914
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 4/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y M A IV D Y +++A K+GD K + E E + Y
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE----CKPNLFTYNAFIGG 285
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++G E L+ + M EKG+ D Y L+ F K A+ +F+ G+ +
Sbjct: 286 LCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPN 345
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ +I+EG +E+ L + + M L ++ ++ G +K A+ ++
Sbjct: 346 RFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFN 405
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ G P TY +I+ Y + +KA ++ EM+ + YS +++ +
Sbjct: 406 EMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSS 465
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ A ++ +M G +PNV++Y +L+
Sbjct: 466 DLQKANEVLDQMIRNGVKPNVFMYGTLI 493
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
K + M E I+ D Y ++I + + +V + + E E K +L + +
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGL 286
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G V++ LEV + M L ++V+GF K++ A ++E + S G P +
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
TY ++I+ + + G +A ++ EM +G VV Y++M+ K G + AM L +
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNL 286
M G EP+ W YN L+D + ++ ++
Sbjct: 407 MLMAGIEPDTWTYNLLIDGYLKSHDM 432
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 3/280 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G+ D Y +++ F K S++ +F S L+ + Y L D K
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLN---PNRFTYTALIDGFIK 358
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G E L+ +M +G+ + Y ++I A E+ A LF E G+ D
Sbjct: 359 EGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWT 418
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ Y++ + K E++ MK +L S V+++G A +V +Q+I
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI 478
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P Y ++I AY + Y A ++ M G + Y+ ++ + ++
Sbjct: 479 RNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+A L+ M KG +PN Y + ++++ ++ ++ E+Y
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++A+ K E+ LFL+ E+R ++ P+ T Y L S + G F+++ F+
Sbjct: 805 YTILIDAYGKAEMMEEAEQLFLDMETR--NIIPN-TLTYTSLLLSYNQIGNRFKMISLFK 861
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
DM+ +GI D Y + ++ + A +L ++ +G+ + +VF L+ +E
Sbjct: 862 DMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEK 921
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ LE++ M EL++S ++ GF K A KV + G +P ++
Sbjct: 922 QISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 981
Query: 205 SIINA 209
I+
Sbjct: 982 DSIST 986
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 114/273 (41%), Gaps = 37/273 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--------------------- 48
+++M S GI D YC +++ K G+ EK +LF E
Sbjct: 721 FDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKH 780
Query: 49 ----ESRKL-------DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
E+R+L LTP+ Y IL D+ GK+ E + F DM+ + I+ +
Sbjct: 781 GKVIEARELFDDMVDKKLTPNIV-TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLT 839
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y SL+ S+ I LFK+ E +G+ D + + Y +EG + L+++
Sbjct: 840 YTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSL 899
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ + D + ++ K + +++ ++ + T +++ + + G
Sbjct: 900 VEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNED 959
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+A KV MQ+ G+ ++ + ++ TGR
Sbjct: 960 EASKVLGVMQRLGWVPTSLSLTDSIS----TGR 988
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 6/286 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ + +KM G+ D+ Y +++ K ++ LF +S P+ + Y IL
Sbjct: 69 MDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMG---CPADDYTYAIL 125
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
SLG+ R E F +M+E+G Y ++I + ++ A + K+ +K +
Sbjct: 126 IRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNL 185
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D L+ G E E+ E MK + + ++ +++ K A +
Sbjct: 186 APDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQ 245
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ ++G P +T+ ++IN R S+A KV EM+ G V Y+ M+ +
Sbjct: 246 FMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFA 305
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQL 289
K G + A + M+ GC NV YN L+D GR ++ R +
Sbjct: 306 KAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDI 351
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 123/276 (44%), Gaps = 5/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLT-PSSTHMYKILCD 68
+ MKS G D Y ++ + + E+ LF E E R + P+ T++ I C
Sbjct: 107 FASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYC- 165
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K+GR + + M +K + D SLI + + ++A E+F+ ++ G+
Sbjct: 166 ---KAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAV 222
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ F ++ + G V + ++ M+ + + ++N + + A KV
Sbjct: 223 NTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVL 282
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ S G P TY +I A+ + G KA ++F +M++ G VV Y+ ++ K
Sbjct: 283 QEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKA 342
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
GR +DA + MK KG P+ L + G+ K
Sbjct: 343 GRYQDARDIYFDMKKKGILPDAITATVLQQLAGKCK 378
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 102/230 (44%), Gaps = 2/230 (0%)
Query: 56 TPSSTHMY--KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
TP H+ + + G+S R +++ F+++ + G + Y +I S V +
Sbjct: 8 TPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVL 67
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A + + + G+ D ++ ++ + M+++ ++ SMK+ D +++
Sbjct: 68 AMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIR 127
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+ + A +++++ +GC P Y ++I+ YC+ G A V +M K
Sbjct: 128 SLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAP 187
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+S++ +TGR A + +MK G N +N+++D G+A
Sbjct: 188 DDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKA 237
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 51/118 (43%)
Query: 167 ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
+S ++ + + + +++L G P TY +I + + G A +M
Sbjct: 16 VSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKM 75
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+ G + + Y+ ++ GK I +A +L A MK GC + + Y L+ GR K
Sbjct: 76 IKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCK 133
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++ ++ G V + Y I+ F K G A++ + ++ + P + Y D
Sbjct: 515 KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI---PPNIVTYTSFIDGY 571
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+ LK D++ KG+ D + Y SLI F + A ++ + G+L ++
Sbjct: 572 CKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNI 631
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
V+ + Y M+E+ L E M +++ +++GFSK A+K+Y +
Sbjct: 632 SVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSE 691
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++++G IP +T+ ++ + CR G A K+ EM + V+ Y+ ++ Y + G+
Sbjct: 692 MVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGK 751
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+++A RL +M + P+ Y+ L+ M
Sbjct: 752 LQEAFRLHDEMLERKIMPDDTTYDILVGM 780
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 16/290 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL L + + E L + M E G+ Y SL+ + + A +L+ E
Sbjct: 389 YNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMP 448
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG ++ + L+ +I + +K ++ MK ++ +D ++NG
Sbjct: 449 GKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVC 508
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ ++ ++G +P +TY SIIN + + G+ A V+ +M KG +V Y+S +
Sbjct: 509 EVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFI 568
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----------------L 286
Y KT A++++ ++ KG P++ YNSL+ + N L
Sbjct: 569 DGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLL 628
Query: 287 RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+ Y + I+ Y + + ++FY + G +D A ++ FSK
Sbjct: 629 PNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSK 678
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 124/277 (44%), Gaps = 3/277 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK G+ + Y ++ +G +V + E+ P++ Y + +
Sbjct: 481 EMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF--VPTAM-TYNSIINGFI 537
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G ++ M KGI + Y S I + + +A ++ + KG+ D+
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIA 597
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + +EG + L+V+ M L + + + G+ + A++ YE++
Sbjct: 598 AYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKM 657
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
I +G TY ++I+ + + G + A K++ EM KG + ++++ + G I
Sbjct: 658 IKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDI 717
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
DA +L+ +M PNV +YN L++ + R L++
Sbjct: 718 DDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQE 754
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 1/218 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ + D L K GR E L ++ G + +L+ + EV+ A ++F+E
Sbjct: 250 FNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETL 309
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G++ + L+ EEGM EK E+ M++ L S +++ G + +
Sbjct: 310 RDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWK 369
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AV +++++ G IP TY +I+ C+ +A ++ +M + G +V Y S++
Sbjct: 370 DAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLL 428
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
Y G + +A++L +M KG PNV Y +LM H
Sbjct: 429 LCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 116/273 (42%), Gaps = 6/273 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC-ESRKLDLTPSSTHMYKI 65
L +E+ G+V Y ++ + G EK L C + R L PS T+ + +
Sbjct: 302 LDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYEL---CRQMRDHGLLPS-TNEFNM 357
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+ L + + F++M + GI D Y LI +++ A L+++ E G
Sbjct: 358 VIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETG 416
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ + + L+L Y G +++ +++ M + ++ G + A+ A
Sbjct: 417 VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAY 476
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ ++ G TY ++IN C +G + ++ + +GF + Y+S++ +
Sbjct: 477 ALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGF 536
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G + A + +M KG PN+ Y S +D
Sbjct: 537 IKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFID 569
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 104/232 (44%), Gaps = 1/232 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P M+ ++ + K G + ++ F +M I D V + I S + + A
Sbjct: 174 PLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALL 233
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ ++ ++ G + F +V + ++ G +E+ L + + + +S ++ +++G+
Sbjct: 234 VLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYC 293
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+R A+ ++E+ + G +P VTY +I G+ KA ++ +M+ G
Sbjct: 294 LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
++ ++ +DA+ L +M G P+ + YN L+ + + +R+
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIRE 404
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 93/232 (40%), Gaps = 11/232 (4%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M+ +G+ D L+ A A A L E KG D +F ++ +EGM
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+ + + + M +E+ + V + K R A+ V ++ G +P T+ S
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+++ + G +A + E+ G VV ++++ Y +R A+ + + G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312
Query: 266 CEPNVWIYNSLM------DMHGRAKNL-RQLEKYTTVISAYNMAREFDMCVK 310
P Y L+ M +A L RQ+ + + S EF+M +K
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPS----TNEFNMVIK 360
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 131/280 (46%), Gaps = 3/280 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
+ + + +E+M+ GIV D + ++ A G ++ + ++R + H
Sbjct: 267 SGDTAVELFEEMEKLGIVPDRITFTGLVSATTAAGLWDRAQSFIDMMQARGFSI---GLH 323
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + + ++ + E F+ M E+G Y +L+C++ A+ + A F
Sbjct: 324 EYIEMQWACARARKPREAYGLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWI 383
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++KG+ D+ + L+ G E+ LEV+E MK ++ + C ++ + K +
Sbjct: 384 QDKGLTPDVMSWSSLISACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNW 443
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++ ++ GC P +V + S+++AY + + K ++++ G VVA+S+
Sbjct: 444 EKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTT 503
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ K G+ A +M GC PN+ Y+SL+ +G
Sbjct: 504 ISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYG 543
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 134/307 (43%), Gaps = 17/307 (5%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R + P++ ++ L +LG R + LK FR M++ GI + +L+ + A
Sbjct: 209 RSAGVEPNA-YVCTTLIAALGCGRRLSQALKLFRWMEKAGIERPIFTFNALMVACGRCAS 267
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
A ELF+E E+ G++ D F LV G+ ++ ++ M+ +I
Sbjct: 268 GDTAVELFEEMEKLGIVPDRITFTGLVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIE 327
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+ ++ R A +++ ++ QG +Y +++ AY R + A + FI +Q KG
Sbjct: 328 MQWACARARKPREAYGLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDKG 387
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
V+++SS+++ G+ A+ ++ +MK C+PNV + L+ + + N + E
Sbjct: 388 LTPDVMSWSSLISACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAE 447
Query: 291 K----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
+ + +++SAY R++ + + G +D +
Sbjct: 448 EIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISAL 507
Query: 335 SKLSQIE 341
+K Q E
Sbjct: 508 AKAGQWE 514
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 129/309 (41%), Gaps = 43/309 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL--C 67
++ M G L Y ++ A+ + E F+ + + LTP ++ C
Sbjct: 345 FQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDK--GLTPDVMSWSSLISAC 402
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ G++ RA E+L+ MK + + L+ ++ + AEE+F + G
Sbjct: 403 ANAGQAERALEVLE---RMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCP 459
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + L+ Y + +K L +E ++ + + ++ +K + A +
Sbjct: 460 PNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEK 519
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG----------------- 230
++Q+ GC+P VTY+S+I AY +GL+ KAE VF M + G
Sbjct: 520 FKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGK 579
Query: 231 ---FDKCVVAYSSMVAMYG----------------KTGRIRDAMRLVAKMKPKGCEPNVW 271
+K ++ + SM YG G + A++ + +M+ GC P+
Sbjct: 580 GKELEKVIIFFESMEPQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSV 639
Query: 272 IYNSLMDMH 280
IY +L++M+
Sbjct: 640 IYTTLINMY 648
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 107/262 (40%), Gaps = 41/262 (15%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLT-PSST 60
++ L E+MK++ + +C +++A+ K G+ EK +F LD P +
Sbjct: 407 QAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIF----HAMLDSGCPPNE 462
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ L + K + ++L ++E G+ D +++ I + A + ++AEE FK+
Sbjct: 463 VAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQ 522
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ G L ++ + L+ Y + G+ EK V + M + + C ++ + K +
Sbjct: 523 MTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKE 582
Query: 181 ---------------------------YWA---------AVKVYEQLISQGCIPGQVTYA 204
+WA AVK +++ GC P V Y
Sbjct: 583 LEKVIIFFESMEPQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYT 642
Query: 205 SIINAYCRIGLYSKAEKVFIEM 226
++IN Y G KA +V M
Sbjct: 643 TLINMYEANGQIDKAMQVLERM 664
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 1/279 (0%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M+ I D + ++ A K G AL L E R+ L P + Y L +
Sbjct: 85 DAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAI-TYNTLISAC 143
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ + + F +M D Y +++ + + AE +FKE EKG D
Sbjct: 144 SQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDA 203
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + +EG VE+ V E + A +++ + K A+ +Y++
Sbjct: 204 VTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDE 263
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + GC P VTY ++++ ++ S+A KV EM G +V +S+++ Y K+GR
Sbjct: 264 MRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGR 323
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
DA R +M G +P+ Y ++D+ R+ R+L
Sbjct: 324 QDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKL 362
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 17/287 (5%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E + LD+ S + + ++ ++ K+G FE++K + MK G L + +Y +I
Sbjct: 682 ELQDLDIKISKSTVL-LMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHN 740
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ E + E E G DL V L+LMY G ++T+EV S+ A L +
Sbjct: 741 KRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTY 800
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
++ +S+ + ++ +G P +Y ++ A + L+ +A+ +F EM+
Sbjct: 801 NTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRT 860
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
KG+ Y M+ +Y A L++ MK G EP + + LM +G + + +
Sbjct: 861 KGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDE 920
Query: 289 LEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
EK Y+TV+ AY R++ + + E + +G
Sbjct: 921 AEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDG 967
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 124/274 (45%), Gaps = 9/274 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE---CESRKLDLTPSSTHMY 63
L +++ AG+ D+ Y ++ A + + + A+F E E R DL Y
Sbjct: 118 LELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRP-DL-----WTY 171
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ G+ G+A E F+++ EKG D Y SL+ +FA +V+ E + +E +
Sbjct: 172 NAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVK 231
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G +D + ++ MY + G ++ L + + M+ V+V+ K
Sbjct: 232 AGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISE 291
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A KV E++ G P VT++++I AY + G AE+ F M + G +AY M+
Sbjct: 292 AGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLD 351
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ ++ R M L M G +P+ +Y L+
Sbjct: 352 VFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLL 385
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 130/291 (44%), Gaps = 18/291 (6%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA--EVKVAEELFKEAEEKGMLR 128
+SGR + + M+++ I D + +LI + A VA EL E + G+
Sbjct: 72 ARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRP 131
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ + ++ + V E M +E +V+ + A ++
Sbjct: 132 DAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMF 191
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++L+ +G P VTY S++ A+ + G + E+V E+ + GF K + Y++M+ MYGK
Sbjct: 192 KELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKM 251
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKY 292
GR+ A+ L +M+ GC P+ Y L+D G+ + + L +
Sbjct: 252 GRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTF 311
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ +I AY + D + ++ +G DR +M+ VF++ + +L
Sbjct: 312 SALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKL 362
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 150/341 (43%), Gaps = 25/341 (7%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ GIV Y I+ ++G E L + + L S + I ++ GK
Sbjct: 543 MQFLGIVPSQKIYQSIIYTCCRLGFPETAYQLMDDAARSDISLNILSCRVAMI--EAYGK 600
Query: 73 SGRAFEILKFFRDMK-EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ F + +K E G+ D ++ +LI ++A + A +F +KG L +E
Sbjct: 601 LKLWQQAENFVKGLKQESGV--DRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVE 658
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
++ I +G +++ VV+ +++ ++ IS +++ F+K + +K+Y +
Sbjct: 659 SVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGM 718
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ G +P Y +I+ C + E + EM+ GF +V ++++ MY TG
Sbjct: 719 KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNF 778
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR------------------QLEKYT 293
+ + + G EP+ YN+L+ M+ R N R +LE Y
Sbjct: 779 DRTIEVYHSILEAGLEPDEDTYNTLIVMYSR--NFRPEEGFTLLYEMGKRGLTPKLESYK 836
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
+++A A+ ++ + E R G ++R++ +M+ ++
Sbjct: 837 ILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIY 877
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 3/231 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + Y + AG+ D Y ++ + + E+ L E R L TP
Sbjct: 777 NFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGL--TPK-LE 833
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
YKIL + GK+ + F +M+ KG + S+Y ++ + + AE L
Sbjct: 834 SYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAM 893
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+E G+ + L+ Y G ++ +V+ S+K++ L IS +++ + + R Y
Sbjct: 894 KEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDY 953
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+ ++ G P + S I A A + +Q GFD
Sbjct: 954 SLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFD 1004
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 124/303 (40%), Gaps = 49/303 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M +G+ D Y +++ F + ++ K+ L+ + D +Y++L +
Sbjct: 331 FDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLY---RAMIKDGYKPDDGLYQVLLAA 387
Query: 70 LGKSGRAFEILKFFRDMKEKGILE-DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K EI +DM+ + E +P V +S++ I++ L K A +G
Sbjct: 388 LAKGNEHDEIEGVIQDME--AVFEMNPLVISSILIKAECISQ---GASLLKRACLQGYEP 442
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIV----NG--------- 174
D + L ++ Y + G EK L ++E ++ N + IS C I+ NG
Sbjct: 443 DGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEY 502
Query: 175 ----FSKRRAYWAAVKVYEQLISQ--------------------GCIPGQVTYASIINAY 210
KR ++ +YE LI+ G +P Q Y SII
Sbjct: 503 SRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKIYQSIIYTC 562
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVA-YSSMVAMYGKTGRIRDAMRLVAKMKPK-GCEP 268
CR+G A ++ + + +++ +M+ YGK + A V +K + G +
Sbjct: 563 CRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGVDR 622
Query: 269 NVW 271
+W
Sbjct: 623 RIW 625
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 11/252 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y++M++ G D+ Y ++++ K+ D A LE E L P+ ++
Sbjct: 258 LGLYDEMRAIGCTPDAVTYTVLVDSLGKM-DRISEAGKVLE-EMADAGLKPTLVTFSALI 315
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
C + KSGR + + F M E G+ D Y ++ FA E + L++ + G
Sbjct: 316 C-AYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGY 374
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLE-VVESMKNA-ELNISDCISCVIVNGFSKRRAYWAA 184
D ++ +++L + +G +E V++ M+ E+N VI + K
Sbjct: 375 KPDDGLY-QVLLAALAKGNEHDEIEGVIQDMEAVFEMN-----PLVISSILIKAECISQG 428
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ QG P + SI++AY ++G + K + ++Q + + + +
Sbjct: 429 ASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIML 488
Query: 245 YGKTGRIRDAMR 256
K G+I DA++
Sbjct: 489 LCKNGKIVDAIQ 500
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 16/295 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYK 64
+H + KMK GI+ Y ++ +G ++ L E + + DL +
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVA-----FS 305
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+L D + K G E + M E G+ D + Y +L+ + EV A ++F+ K
Sbjct: 306 VLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISK 365
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWA 183
G + D+ F LV Y + +++ ++ + M + L I D +S +++G + R
Sbjct: 366 GRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGL-IPDTVSYNTLISGLCQARRPLE 424
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++++ + S G P VTY+ +++ + G +A +F M+ G +V Y+ M+
Sbjct: 425 AEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMID 484
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------MHGRAKNLRQLEK 291
K G+ +DA L A++ KG +PN W+ +D + K RQ+EK
Sbjct: 485 GMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEK 539
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M + G + Y I++ ++G + +V L E K+ +Y + D
Sbjct: 184 FDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLL---EHMKVVGCEPDVVIYNTIVDR 240
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K E + F MK GIL Y SLI ++ K A L E + ++ D
Sbjct: 241 LCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPD 300
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L F L+ + +EG V + ++++M + ++NG+ R A KV+E
Sbjct: 301 LVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFE 360
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+IS+G +P +++ ++N YC+ +A+++F EM +G V+Y+++++ +
Sbjct: 361 VMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQAR 420
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
R +A L M G PN+ Y+ L+D
Sbjct: 421 RPLEAEELFKDMHSNGYPPNLVTYSILLD 449
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 2/187 (1%)
Query: 94 DPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
+P+V +++LI F ++ A ELF +G ++ + ++ G + ++
Sbjct: 158 EPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIK 217
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
++E MK I IV+ K R AV ++ ++ G +P VTY S+I+
Sbjct: 218 LLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLR 277
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+G + +A + EM+ +VA+S ++ + K G + +A ++ M G EP+V
Sbjct: 278 NLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVA 337
Query: 272 IYNSLMD 278
YN+LM+
Sbjct: 338 TYNTLMN 344
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 61/109 (55%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N F + V ++I G P +T++++IN +C G +A ++F M +
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G+ V +YS ++ + G+ + ++L+ MK GCEP+V IYN+++D
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVD 239
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/358 (18%), Positives = 144/358 (40%), Gaps = 39/358 (10%)
Query: 11 EKMKSAGIVLDS-------GCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
++M+ AGI D C+C++ Y K+ L LE + +
Sbjct: 115 KQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLE----------PNVITF 164
Query: 64 KILCDSL---GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
L + GK GRA E+ F M +G + Y+ +I + + +L +
Sbjct: 165 STLINGFCIEGKIGRAIEL---FDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEH 221
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ G D+ ++ +V ++ +V + + + MK + + +++G
Sbjct: 222 MKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGR 281
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ A + ++ +P V ++ +I+ C+ G S+A + M + G + V Y++
Sbjct: 282 WKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNT 341
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--------- 291
++ Y + +A ++ M KG P+V+ ++ L++ + +AK + + ++
Sbjct: 342 LMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRG 401
Query: 292 -------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y T+IS AR + + + NG + I++ SK +++
Sbjct: 402 LIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQ 459
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 81/200 (40%), Gaps = 9/200 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M S G + D + ++ + K ++ LF E R L P + Y L
Sbjct: 359 FEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHR--GLIPDTVS-YNTLISG 415
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++ R E + F+DM G + Y+ L+ + + A LF+ E G+ D
Sbjct: 416 LCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPD 475
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + ++ + G + E+ + L ++ + ++G K A K +
Sbjct: 476 LVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFR 535
Query: 190 QL------ISQGCIPGQVTY 203
Q+ +QGCI G+ TY
Sbjct: 536 QMEKDDCSPAQGCINGRATY 555
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 2/257 (0%)
Query: 38 SEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
SE F E L TH +KI+ + LG++ + DM KG+ D +
Sbjct: 134 SEHALNFFRWVERAGLFQHDRETH-FKII-EILGRASKLNHARCILLDMPNKGVQWDEDL 191
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ LI S+ V+ A ++F++ +E G+ R ++ + L + G +M
Sbjct: 192 FVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGRYMMAKRYFNAML 251
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
N + V++ GF A + YE + S+G P VTY ++IN YCR +
Sbjct: 252 NEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMME 311
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+AE+ F EM+ K V++Y++M+ Y R DA+RL +MK G +PN Y++L+
Sbjct: 312 EAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLL 371
Query: 278 DMHGRAKNLRQLEKYTT 294
A+ L + K T
Sbjct: 372 PGLCDAEKLPEARKILT 388
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 116/278 (41%), Gaps = 13/278 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+YE MKS GI D Y ++ + + E+ F E + + + T S Y +
Sbjct: 281 FYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVIS---YTTMIK 337
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML- 127
RA + L+ F +MK G + Y++L+ ++ A ++ E +
Sbjct: 338 GYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAP 397
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+D +F++L+ + G ++ + V+++M + +++ K Y AVK+
Sbjct: 398 KDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKL 457
Query: 188 YEQLISQGCI--PGQV------TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
E L+ + I P Y II C G KA+ F ++ +KG VA++
Sbjct: 458 LENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQD-EVAFN 516
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+++ + K G A ++ M +G + Y L+
Sbjct: 517 NLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLI 554
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 104/276 (37%), Gaps = 44/276 (15%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST-----H 61
+H + M I ++G Y ++E K G ++ L +++ L P ST
Sbjct: 420 MHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEAS 479
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y ++ L G+ + FFR + +KGI +D + +LI A +A E+ K
Sbjct: 480 AYNLIIQYLCNHGQTGKADTFFRQLLKKGI-QDEVAFNNLIRGHAKEGNPDLAFEMLKIM 538
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ RD E + L+ Y+ +G ++SM I NG S
Sbjct: 539 GRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSM--------------IENGHS----- 579
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
P + S++ + G A +V M KG + + + +
Sbjct: 580 ----------------PDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKI 623
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G +A+ + + C P+ +NSL+
Sbjct: 624 LEALFMRGHDEEALGRINLLMNCNCPPD---FNSLL 656
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 11/280 (3%)
Query: 4 QSKL----HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTP 57
QSK+ + +M++ I DS Y +++ K G + LF R LD +TP
Sbjct: 163 QSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLF----QRMLDSGITP 218
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S+ Y ++ + + E L+ F+ M+ KG + LI + ++ A L
Sbjct: 219 SAV-TYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRL 277
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
K + G + D+ + L+ V+ ++E M + + +++G K
Sbjct: 278 LKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCK 337
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A +V + ++S G P VTY ++++ +CR G +A ++ +M +G VV
Sbjct: 338 AGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVT 397
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y+++V+ K R+ +A + A+MK GC PN++ Y +L+
Sbjct: 398 YTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 146/350 (41%), Gaps = 21/350 (6%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L + +M+ G + + I+ + ++ +F E E++ + P + Y
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI---PPDSWSY 188
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL D L K+G+ E K F+ M + GI Y +I + A ELFK
Sbjct: 189 GILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS 248
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYW 182
KG F L+ + + G +++ +++ M + + ++ D ++ +++G
Sbjct: 249 KGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTD-DGHVPDVVTYSTLISGLCSIARVD 307
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + E ++ + C P VT ++I+ C+ G +A +V M G VV Y+++V
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-------------- 288
+ + G+ A L++ M +G PNV Y +L+ +A L +
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427
Query: 289 --LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
L YT +I + A + D +K + E G D + G + K
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCK 477
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 5/293 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMYKILCDS 69
+KM G V D Y +M+ K E+ LF E E +L TP+ +H IL
Sbjct: 104 KKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEME--RLGCTPNRRSHNTIIL--G 159
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + + + + F +M+ K I D Y LI A ++ A +LF+ + G+
Sbjct: 160 LCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPS 219
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ +++ LE+ +SM++ S ++++ KR A ++ +
Sbjct: 220 AVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLK 279
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ G +P VTY+++I+ C I A + +M ++ VV ++++ K G
Sbjct: 280 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAG 339
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
RI++A ++ M G P+V YN+L+ H RA + + + + A +A
Sbjct: 340 RIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 392
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ ++K+ +G+ + Y ++ + LF + R P S Y ++
Sbjct: 31 NLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG---CPPSPVTYNVMI 87
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D+ K G E + M E G + D Y +++ + V+ A LF E E G
Sbjct: 88 DASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCT 147
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ ++L ++ +++ +V M+ ++ ++++G +K A K+
Sbjct: 148 PNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKL 207
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++++ G P VTY +I+ C +A ++F M+ KG ++ ++ + K
Sbjct: 208 FQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCK 267
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G++ +A RL+ +M G P+V Y++L+
Sbjct: 268 RGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 297
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 120/290 (41%), Gaps = 22/290 (7%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
+++P S Y IL D L K+G+ + F+ + G+ Y SLI
Sbjct: 5 NVSPDSWS-YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIV 172
A ELF + +G + ++ + GM+E+ ++++ M + ++ D ++ ++
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIE-DGHVPDVVTYNTVM 122
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+G K A+ ++ ++ GC P + ++ +II C+ +A +VF EM+ K
Sbjct: 123 DGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIP 182
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+Y ++ K G++ +A +L +M G P+ YN
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYN------------------ 224
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
VI +A D ++ + R G R I++ K +++E
Sbjct: 225 -VVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDE 273
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 89/236 (37%), Gaps = 35/236 (14%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S + IL D+ K G+ E + + M + G + D Y++LI SIA V A L
Sbjct: 253 PSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312
Query: 118 F----------------------------KEAEE-------KGMLRDLEVFLKLVLMYIE 142
KEA E G D+ + LV +
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G E+ E++ M L + +V+G K A V+ Q+ S GC P T
Sbjct: 373 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
Y ++I +C G K+F EM G V Y ++ A K+GR A+ ++
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/218 (18%), Positives = 84/218 (38%), Gaps = 3/218 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G V D Y ++ I + L + R+ T + + L L
Sbjct: 279 KRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN---TLIHGL 335
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+GR E + M G D Y +L+ + + A EL + +G+ ++
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 395
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ LV + + + V MK++ + ++ GF +K++ +
Sbjct: 396 VTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE 455
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
++ G P V Y ++ C+ G ++A ++ E ++
Sbjct: 456 MVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 35/262 (13%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L SL K G+ E L+ +M+ + D Y+ LI +V+ A +L+KE
Sbjct: 328 LYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387
Query: 122 E-------------------EKGMLRDLEVFLKLVLM----------------YIEEGMV 146
EKGML D ++ ++M Y++ G V
Sbjct: 388 CFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDV 447
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
E+ + + + +++ + S ++ GF K R A ++ E + G P VTY ++
Sbjct: 448 EEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTL 507
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
+NAYC G +K ++ +EM K + VV Y+ ++ K ++ ++++L+ M+ KG
Sbjct: 508 MNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGL 567
Query: 267 EPNVWIYNSLMDMHGRAKNLRQ 288
P+ YN+++ +AK++R+
Sbjct: 568 APDQITYNTIIQCFCKAKDMRK 589
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 104/227 (45%), Gaps = 1/227 (0%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
+L P T +Y I+ D K G E ++ ++ +++K I + SLI F +V
Sbjct: 426 NLRPDVT-LYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVE 484
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A L + + G+ + L+ Y EEG + K E++ M ++ + V++
Sbjct: 485 ARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIK 544
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G K+R +V++ E + ++G P Q+TY +II +C+ KA ++ +M +
Sbjct: 545 GLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEP 604
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
Y+ ++ + G + DA R++ ++ + Y +++ H
Sbjct: 605 TPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAH 651
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 135/308 (43%), Gaps = 28/308 (9%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS--- 69
M GI+ D+ Y ++ G E+ AL L + K L P YKI+
Sbjct: 211 MLKYGILPDTYSYNILIHGLIVAGSMEE--ALELTNDMEKQGLQPDMV-TYKIVAKGFHL 267
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG A EI++ + + ++G+ D Y LIC + ++ A L ++ G +
Sbjct: 268 LGLMSGAREIIQ--KMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLN 325
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ L+ + G V++ L+++ M+ L ++++G K+ A+++Y+
Sbjct: 326 VILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYK 385
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ P ++ I+ C G+ S A F + V Y+ M+ Y K G
Sbjct: 386 EMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLG 445
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------------K 291
+ +A+RL +++ K P++ +NSL ++G KN + +E
Sbjct: 446 DVEEAVRLYKRLRDKAITPSIVTFNSL--IYGFCKNRKVVEARRLLESIKLHGLEPSAVT 503
Query: 292 YTTVISAY 299
YTT+++AY
Sbjct: 504 YTTLMNAY 511
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP S I+ D L R + + F R K + +++ + + VA+
Sbjct: 146 TPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAK 205
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
F + G+L D + L+ I G +E+ LE+ M+ L ++ GF
Sbjct: 206 SFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGF 265
Query: 176 SKRRAYWAAVKVYEQLIS-QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
A ++ +++++ +G P VTY +I +C++G +A ++ ++ GF
Sbjct: 266 HLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLN 325
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
V+ YS +++ K G++ +A++L+ +M+ +P++ Y+ L +HG K
Sbjct: 326 VILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSIL--IHGLCK 373
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 121/294 (41%), Gaps = 38/294 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E +K G+ + Y +M A+ + G+ K+ L LE + D+ P+ Y ++ L
Sbjct: 490 ESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLK--DIEPTVV-TYTVVIKGL 546
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + E ++ DM+ KG+ D Y ++I F +++ A EL +
Sbjct: 547 CKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDD---------- 596
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
M+ LE + N V+++G + A +V
Sbjct: 597 --------------MLIHNLEPTPATYN-----------VLIDGLCRYGDVEDADRVLVS 631
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L + +V Y ++I A+C G +A KVF +M +KGF+ + YS+++ K
Sbjct: 632 LQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCL 691
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
I +A M G P+ I+ +++ RA ++ + + V+ + + +
Sbjct: 692 INEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%)
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
+V +K++ S S +IV+G + + AV Q + P V++ +I++ Y
Sbjct: 136 DVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRY 195
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
C++GL A+ F M + G +Y+ ++ G + +A+ L M+ +G +P++
Sbjct: 196 CKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDM 255
Query: 271 WIY 273
Y
Sbjct: 256 VTY 258
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 140/315 (44%), Gaps = 5/315 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M S+G Y ++ + GD ++ + K P+ Y +L
Sbjct: 393 YDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIV--SKMLKNGFKPND-QSYSLLLQC 449
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G A I +++ I + +L+ + ++ E+ F+E + +G D
Sbjct: 450 YAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPD 509
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L +F ++ MY + G+ K E+ +S+K + L+ +++ ++K W A K+ +
Sbjct: 510 LVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILK 569
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
QL S P V+Y ++IN +C+ GL +A+++ EM G CVV Y ++V Y
Sbjct: 570 QLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLE 629
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
+A +V M +P Y ++D + +AK + ++ + IS + + FD +
Sbjct: 630 MFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEIS--DTDQNFDQKL 687
Query: 310 KFYNEFRMNGGVIDR 324
+ E R+ R
Sbjct: 688 QHMLEARIKDAQFGR 702
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 142/322 (44%), Gaps = 20/322 (6%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
G LD Y ++ A + G E+ LF E R+ + P+ Y ++ D G+ G
Sbjct: 82 PPGSRLDVRAYTTVLHALSRAGRYERALQLFAEL--RRQGVVPTIV-TYNVVLDVYGRMG 138
Query: 75 RAFE-ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
R++ I+ +M+ G+ D +++I + + A F++ + +G + + +
Sbjct: 139 RSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTY 198
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ ++ + G + L V++ M+++ + +++ + A K + + S
Sbjct: 199 NALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTS 258
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G +P TY +++ AY +G +A +F M++ G+ V Y+ + M GK R
Sbjct: 259 KGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTA 318
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGR-------AKNLRQL---------EKYTTVIS 297
+ ++ +M GC PN +N+++ + G+ + L + + Y T+IS
Sbjct: 319 MLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLIS 378
Query: 298 AYNMAREFDMCVKFYNEFRMNG 319
AY K Y+E +G
Sbjct: 379 AYGRCGSRTYAFKMYDEMISSG 400
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 105/229 (45%), Gaps = 17/229 (7%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA-VKV 187
D+ + ++ G E+ L++ ++ + + V+++ + + W V +
Sbjct: 88 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVAL 147
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
E++ + G P T +++I A R GL +A F +++ +G CVV Y++++ ++GK
Sbjct: 148 LEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGK 207
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
G +A+R++ +M+ GC+P+ YN L + RA + K
Sbjct: 208 AGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFT 267
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y TV++AY D + ++ + NG V + ++ G+ K S+
Sbjct: 268 YNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRF 316
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 130/319 (40%), Gaps = 40/319 (12%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L ++M+ +G D+ Y ++ + + G E+ A S+ L +T
Sbjct: 210 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGL---LPNTF 266
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + + GR E L F MK+ G + + + Y + + E+ +E
Sbjct: 267 TYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEM 326
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G + + ++ + + GM + V+ MK+ + +S +++ + + +
Sbjct: 327 SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR 386
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K+Y+++IS G P TY +++N R G +S A+ + +M + GF +YS +
Sbjct: 387 TYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLL 446
Query: 242 VAMYGKTG-----------------------------------RIRDAMRLVAKMKPKGC 266
+ Y K G R+ + ++K +G
Sbjct: 447 LQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGY 506
Query: 267 EPNVWIYNSLMDMHGRAKN 285
+P++ I+NS++ M+ AKN
Sbjct: 507 KPDLVIFNSMLAMY--AKN 523
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 6/266 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM+ GI Y +++ K + + LF E K LTP Y +L D+L
Sbjct: 518 KMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMME--KNGLTPDE-QAYNVLTDALC 574
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
KSGRA E F + KG++ Y SL+ F+ A L ++ +G DL
Sbjct: 575 KSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLY 631
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ ++ + + L +++ M + + + +I++ K + A ++ ++
Sbjct: 632 TYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM 691
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
IS G P TY I++YC+IG +AE + EM++ G VV Y + G G +
Sbjct: 692 ISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYM 751
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
A + +M CEPN W Y L+
Sbjct: 752 DRAFSTLKRMVDASCEPNCWTYWLLL 777
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 112/285 (39%), Gaps = 20/285 (7%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S Y + D KSGR + L M++ G D Y SLI ++ AEEL
Sbjct: 317 PSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEEL 375
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
A +G + F L+ Y + ++ L V +M ++ + V++N K
Sbjct: 376 LNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIK 435
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A + ++ + G P V Y SII+ YC++G+ A +VF M+ +G
Sbjct: 436 KCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWT 495
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
Y S++ + ++ AM L+ KM+ G P V YTT+I
Sbjct: 496 YGSLIYGLIQDKKLHKAMALITKMQEDGITPGVI-------------------AYTTLIQ 536
Query: 298 AYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
EFD + + NG D ++ K + EE
Sbjct: 537 GQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEE 581
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 24/307 (7%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
KLDL Y +L + L K R E + +M G+ + +Y S+I + + V
Sbjct: 420 KLDL-----QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMV 474
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A E+FK E +G + + L+ I++ + K + ++ M+ + +
Sbjct: 475 GAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTL 534
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ G K+ + A +++E + G P + Y + +A C+ G +AE+ + + +KG
Sbjct: 535 IQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGV 591
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ--- 288
V Y+S+V + K G A L+ KM +GC+ +++ Y+ L+ + K L +
Sbjct: 592 VLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALS 651
Query: 289 -------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+ YT +IS + D +NE +G + + +
Sbjct: 652 ILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYC 711
Query: 336 KLSQIEE 342
K+ QIEE
Sbjct: 712 KIGQIEE 718
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 117/277 (42%), Gaps = 15/277 (5%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
K + + ++G+L D Y ++I ++ + +A F E GM D L+L Y
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ K ++ M ++ +++ G + R A+ + ++ GC
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNL 284
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
Y +I C+ G A + EM +G V Y++M+ Y K+GR++DA+ + A
Sbjct: 285 HMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344
Query: 261 MKPKGCEPNVWIYNSLMD--MHGRAKNLRQLEK-------------YTTVISAYNMAREF 305
M+ GC P+ W YNSL+ G+ +L +T +I+ Y A
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERI 404
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
D ++ + + +D G+++ V K +++E
Sbjct: 405 DDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKE 441
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 114/286 (39%), Gaps = 23/286 (8%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
Y + G+VL Y +++ F K G+++ A L + E K DL + Y +L
Sbjct: 583 YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL-----YTYSVLL 637
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+L K + E L M G+ + Y +I + A+ LF E G
Sbjct: 638 QALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHK 697
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + Y + G +E+ ++ M+ + + +NG A
Sbjct: 698 PSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFST 757
Query: 188 YEQLISQGCIPGQVTY---------ASIINAYC--RIGLYSKAE-----KVFIEMQQKGF 231
++++ C P TY S+INA+ G+++ E ++ M + G
Sbjct: 758 LKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGL 817
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ VV YSS++A + K R+ +A L+ M K PN IY L+
Sbjct: 818 NPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLI 863
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 118/309 (38%), Gaps = 45/309 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILCD 68
+M + G+ + Y I++ + K+G +F +E E + + +Y ++ D
Sbjct: 447 NEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQD 506
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ + + M+E GI Y +LI E A LF+ E+ G+
Sbjct: 507 K-----KLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTP 561
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + + L + G E E + + ++ +V+GFSK A +
Sbjct: 562 DEQAYNVLTDALCKSGRAE---EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLI 618
Query: 189 EQLISQGCIPGQVTYASIINAYCRI----------------------------------- 213
E+++++GC TY+ ++ A C+
Sbjct: 619 EKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKE 678
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G + A+ +F EM G Y+ ++ Y K G+I +A L+ +M+ G P+V Y
Sbjct: 679 GKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTY 738
Query: 274 NSLMDMHGR 282
+ ++ G
Sbjct: 739 HIFINGCGH 747
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 138/287 (48%), Gaps = 8/287 (2%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSS 59
+ SQ +L +K+ G + Y I++ F K G A++ E C K+ ++P+
Sbjct: 555 SESQDRL---KKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMC---KIGVSPN- 607
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
Y L + KS LK +MK KGI D +VY +LI F ++ A +L
Sbjct: 608 VFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLS 667
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E +E G+ + V+ ++ + + +E L + + M N + I +++G K
Sbjct: 668 ELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEG 727
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A ++Y +++++G +P +TY+ +I+ C G A+K+ +M +K V Y+
Sbjct: 728 KLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYN 787
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+++ + K G +++A RL +M KG P+ Y+ L++ + NL
Sbjct: 788 TLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +M+ ++K GD+E L+ R ++ PS I+ + L K+GR E +
Sbjct: 506 YSVLMDGYFKKGDTEYAFGLYDRM--RGENIAPSD-FTCNIIINGLCKAGRTSESQDRLK 562
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+ ++G + Y +I F V A ++ E + G+ ++ + L+ + +
Sbjct: 563 KLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSN 622
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ L+V++ MKN + + + C +++GF ++ A ++ +L G P +V Y+
Sbjct: 623 NMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYS 682
Query: 205 SIINAY----------------------CRIGLYSK-------------AEKVFIEMQQK 229
S+I+ + C + +Y+ A +++ EM K
Sbjct: 683 SMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAK 742
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G ++ YS ++ G++ +A +++ M K P V+IYN+L+ H + NL++
Sbjct: 743 GIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQE 801
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 4/220 (1%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
N L ++MK+ GI LD YC +++ F + GD + L E + ++ L+P+
Sbjct: 622 NNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQ--EVGLSPNKV 679
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+Y + K L + M +GI D +Y +LI ++ A EL+ E
Sbjct: 680 -VYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAE 738
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
KG++ DL + L+ +G +E +++E M + + I ++ G K
Sbjct: 739 MLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGN 798
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG-LYSKA 219
A +++ +++ +G +P TY ++N + G L+S A
Sbjct: 799 LQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLFSGA 838
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 134/283 (47%), Gaps = 4/283 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
S L ++KM GI ++ Y I+E K G+ +K ++ + +++ D++P+ ++
Sbjct: 346 DSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNK--DISPTVFNVN 403
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ L K+ E K F + GI + Y SL+ ++ A ++++
Sbjct: 404 SLIRGYL-KARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVR 461
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ + + ++L + ++G ++ V M L + V+++G+ K+
Sbjct: 462 KGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEY 521
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +Y+++ + P T IIN C+ G S+++ ++ Q+GF + Y+ ++
Sbjct: 522 AFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIID 581
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ K G + A+ + +M G PNV+ Y +L++ ++ N+
Sbjct: 582 GFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNM 624
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 104/206 (50%), Gaps = 1/206 (0%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G+ E +FR+ K KG+ D Y+ +I + + A L +E +KG +
Sbjct: 236 REGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEV 295
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+F +++ + +++G + + ++V M + ++ ++ ++ G+ K+ +A+++++++
Sbjct: 296 IFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKM 355
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
G P VTYA II C+ G KA +++ +M+ K V +S++ Y K
Sbjct: 356 NENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSP 415
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A +L + G NV+ YNSL+
Sbjct: 416 EEASKLFDEAVACGIA-NVFTYNSLL 440
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 115/273 (42%), Gaps = 8/273 (2%)
Query: 41 VAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYAS 100
V A +E SR+LD S + ++ L +S K+ R + + F + EK I+ +V
Sbjct: 137 VVARLIE-SSRRLDFE-SDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNI 194
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
+ ++ A +++ + KG+ D ++ + EG +E+ KN
Sbjct: 195 FLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKG 254
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
+ + +++ K+ AA+ + ++ +G +P +V + +I + G +A
Sbjct: 255 VELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAV 314
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
KV EM G VV ++++ Y K G + A+ L KM G PN Y +++
Sbjct: 315 KVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWC 374
Query: 281 GRAKNLRQLEKYTTVISAYNMAREFDMCVKFYN 313
+ N+ + YN + D+ +N
Sbjct: 375 CKNGNMDK------AYEIYNQMKNKDISPTVFN 401
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 1/238 (0%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D+ P T M I L K+ E + M KG+ D + + +I + +++
Sbjct: 184 DIVPCLTVM-NIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEE 242
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
AE F+EA+ KG+ D + ++ ++ L ++ M++ + I ++
Sbjct: 243 AEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIG 302
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
K+ AVKV +++S G V +++ YC+ G A ++F +M + G
Sbjct: 303 VCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICP 362
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
V Y+ ++ K G + A + +MK K P V+ NSL+ + +A++ + K
Sbjct: 363 NNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASK 420
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 142/322 (44%), Gaps = 21/322 (6%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+++K+ + G LD Y ++ K+G++ L + + + L MY +
Sbjct: 147 FHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAV---MYNTVIY 203
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ K + + +M KGI + Y++LI F + ++K A +LF + + +
Sbjct: 204 GMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKP 263
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKV 187
D F LV + ++ +++ V M + I D ++ +++G+ + A +
Sbjct: 264 DGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGI-IPDVVTYNSLMDGYCLVKEVNTAKSI 322
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ + G P +Y +IN +C+I KA +F EM K VV Y+S++ K
Sbjct: 323 FNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSK 382
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD----MHGRAKNLRQLEK------------ 291
+GRI A++LV +M +G PN+ YNS++D H K + + K
Sbjct: 383 SGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYT 442
Query: 292 YTTVISAYNMAREFDMCVKFYN 313
YT +I +D+ V YN
Sbjct: 443 YTILIDGLCKVEGYDITVNTYN 464
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 128/294 (43%), Gaps = 48/294 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
Y +M S GI + Y ++ F+ +G + LF + E+ K D + + IL
Sbjct: 218 YSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPD-----GYTFNILV 272
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D K + E F M ++GI+ D Y SL+ + + EV A+ +F + G+
Sbjct: 273 DGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVN 332
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ + +++NGF K + A+ +
Sbjct: 333 PDIRSY-----------------------------------NILINGFCKIKKVDKAMNL 357
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ ++ + IP VTY S+I+ + G S A ++ +M +G ++ Y+S++ K
Sbjct: 358 FNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFK 417
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
T ++ A+ L+ K K +G +P+++ Y L+D L ++E Y ++ YN+
Sbjct: 418 THQVDKAIALITKFKDQGIQPSMYTYTILID------GLCKVEGYDITVNTYNV 465
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 93/242 (38%), Gaps = 23/242 (9%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M GI+ D Y +M+ + + + ++F ++ S Y IL +
Sbjct: 288 FAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRS---YNILING 344
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K + + + F +M K I+ + Y SLI + + A +L + ++G+ +
Sbjct: 345 FCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPN 404
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ + V+K + ++ K+ + S ++++G K Y V Y
Sbjct: 405 ILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYN 464
Query: 190 QLI--------------------SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+I CIP VTY I + KAEK+F EM +
Sbjct: 465 VMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITR 524
Query: 230 GF 231
G
Sbjct: 525 GL 526
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 6/185 (3%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM- 156
Y+S +F S +V A LF + F K++ ++ L + + M
Sbjct: 54 YSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKME 113
Query: 157 -KNAELNISDC---ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ + N+ +C I C G + + A + +++L++ G QV+Y ++I+ C+
Sbjct: 114 FRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFL-FHDKLVALGFHLDQVSYGTLIHGLCK 172
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
+G A + + K V Y++++ K + DA L ++M KG PNV
Sbjct: 173 VGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVT 232
Query: 273 YNSLM 277
Y++L+
Sbjct: 233 YSALI 237
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 133/297 (44%), Gaps = 16/297 (5%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L S K GR + K +++M G D ++ + + E + LF+E
Sbjct: 266 VYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI 325
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G + D + L+ ++ G+ +T E+ +MK + +++GF K
Sbjct: 326 NAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKV 385
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++ E++ +G P VTY S+I+ +I +A +F E + G VV YSS+
Sbjct: 386 NKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSL 445
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------KNLRQLE- 290
+ +GK GRI +A ++ ++ KG PNV+ +N L+D +A ++++ L+
Sbjct: 446 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKC 505
Query: 291 -----KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ +I+ R+F+ F+ E + G + M+ +K I E
Sbjct: 506 PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILE 562
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 146/343 (42%), Gaps = 29/343 (8%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-----CESRKLDLTPSSTHMYK 64
YEKM G V + Y ++ +F+K G E ++ E C DLT +T+M
Sbjct: 252 YEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSP---DLTLINTYM-- 306
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
D + K+G + FR++ G + D Y+ LI ELF +E+
Sbjct: 307 ---DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 363
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G + D + ++ + + G V K +++E MK + +++G +K A
Sbjct: 364 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 423
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++E+ S G V Y+S+I+ + ++G +A + E+ QKG V ++ ++
Sbjct: 424 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 483
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK------ 291
K I +A+ MK C PN Y+ L++ R + ++++K
Sbjct: 484 LVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPN 543
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
YTT+IS A ++ F+ NGG+ D A M+
Sbjct: 544 TITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 586
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 3/276 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G VLD+ Y +++ F K G K L E K+ P + Y + D L K
Sbjct: 360 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL---EEMKVKGHPPTVVTYGSVIDGLAK 416
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R E F + K GI + VY+SLI F + + A + +E +KG+ ++
Sbjct: 417 IDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 476
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ ++ + + L +SMK+ + + +++NG + R + A ++++
Sbjct: 477 WNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQ 536
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P +TY ++I+ + G +A +F + G +Y++M+ +
Sbjct: 537 KLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAM 596
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
DA L + + KGC + L+D +A+ L Q
Sbjct: 597 DAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQ 632
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 98/218 (44%), Gaps = 1/218 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y + G +G+ E K KG + Y ++ V+ A +F+E
Sbjct: 91 YAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEE 150
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ + + ++ + L+ M EG + LE+ + M+ A L + ++++ K +
Sbjct: 151 MK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQK 209
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A ++E + + C P VT++S+I+ + G A ++ +M G + Y+S
Sbjct: 210 LEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTS 269
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ + K GR D ++ +M GC P++ + N+ MD
Sbjct: 270 LIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMD 307
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 63/291 (21%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP++ + L D LGK GR + + M + G + VY SLI SF +
Sbjct: 226 TPNAV-TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 284
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+++KE G DL + I+ + CV G
Sbjct: 285 KIYKEMVHTGCSPDLTL------------------------------INTYMDCVFKAGE 314
Query: 176 SKR-RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+++ RA ++ ++ + G IP +Y+ +I+ + GL ++ ++F M+++G C
Sbjct: 315 TEKGRA------LFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG---C 365
Query: 235 VV---AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
V+ AY++++ + K+G++ A +L+ +MK KG P V Y S++D G AK R E
Sbjct: 366 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVID--GLAKIDRLDEA 423
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y + E + NG ++ + ++ F K+ +I+E
Sbjct: 424 YM-----------------LFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDE 457
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV+++EQL +P Y ++I Y G + +A + + KG V+AY+ ++
Sbjct: 74 AVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILT 133
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
GK R+ +A+R+ +MK + PNV YN L+DM R L
Sbjct: 134 CLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKL 175
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
C+ +A ++F +++Q C AY++M+ YG G+ +A L+ + K KG P+V
Sbjct: 66 CKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSV 125
Query: 271 WIYNSLMDMHGRAKNLRQ 288
YN ++ G+ + + +
Sbjct: 126 IAYNCILTCLGKKRRVEE 143
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++++ S+G+ D Y ++ + ++ D + + ES DL+ ++ Y +
Sbjct: 200 LHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVAT---YNVF 256
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L K+ R +E ++ + KG+ D Y +L+ + E + EE+ E E G
Sbjct: 257 IRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGF 316
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ LV ++G + ++V +K + S + ++N K A
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAES 376
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ + +G P VTY+ +I+++C+ G A +M + G V YSS+++ +
Sbjct: 377 LFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHC 436
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++R A L +M G +PNV IY SL+
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSLI 467
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 125/286 (43%), Gaps = 5/286 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N S K+K G+ Y ++ + K G ++ +LF + L P+
Sbjct: 335 NIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGL--FPNDV- 391
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL DS K G+ L F M E GI Y+SLI + +++ A+ LF E
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G+ ++ ++ L+ Y +EG + + M ++ + +++G
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K++ +++ IP +VTY +I +C+ G +A ++ EM +KG Y +
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
++ TGR+ +A + ++ + + N +++L +HG K R
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSAL--LHGYCKEGR 615
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 3/269 (1%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G+ D G YC ++ K+ + E A + E + PS + L D L K G
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFE--AGEEMMNEMIEFGFVPSEAAVSN-LVDGLRKKGNI 336
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
+K+ G+ VY +LI S ++ AE LF KG+ + + L
Sbjct: 337 GSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSIL 396
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ + + G ++ L + M + + +++G K AA +++++I+ G
Sbjct: 397 IDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGL 456
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P V Y S+I+ YC+ G A +++ EM KG ++++++ R+ +A +
Sbjct: 457 KPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANK 516
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
L +M PN YN L++ H + N
Sbjct: 517 LFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 117/270 (43%), Gaps = 6/270 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G+ +D CY ++ + D + L + + L P + +Y + D+
Sbjct: 625 EMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGL--RPDNV-LYTTMIDANA 681
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G + M +G L + Y +LI I + AE L +E L +
Sbjct: 682 KAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQN 741
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ + EG +EK +++ + + L + +++ GF K A +V +
Sbjct: 742 TYACFLDYLTSEGNIEKAIQLHDVLLEGFL-ANTVTYNILIRGFCKLGRIQEAAEVLVNM 800
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
I G P ++Y++II YCR G +A K++ M +G + VAY+ ++ TG +
Sbjct: 801 IDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGEL 860
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
A L M +G +PN YNSL +HG
Sbjct: 861 TKAFELRDDMMRRGVKPNRATYNSL--IHG 888
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S+T + +L + ++ R + L R M + GIL + ++ I + ++A L
Sbjct: 143 STTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHL 202
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F E G+ D+ V+ +V E + EV+ M+++ ++S V + G K
Sbjct: 203 FDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCK 262
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ W AV++ L +G TY +++ C++ + E++ EM + GF A
Sbjct: 263 NQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAA 322
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
S++V K G I A LV K+K G P++++YN+L++
Sbjct: 323 VSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALIN 363
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 136/313 (43%), Gaps = 37/313 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M ++ + Y ++E K G++ + L E + L P T+ Y+ L
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL--VPD-TYTYRPLISG 574
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L +GR E +F D++ + + +++L+ + + A + +E +G+ D
Sbjct: 575 LCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMD 634
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + L+ + + +++++ M + L + + +++ +K A +++
Sbjct: 635 LVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWD 694
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ--------------------- 228
++S+GC+P VTY ++IN C+IGL KAE + EM
Sbjct: 695 IMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEG 754
Query: 229 -------------KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+GF V Y+ ++ + K GRI++A ++ M G P+ Y++
Sbjct: 755 NIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 814
Query: 276 LMDMHGRAKNLRQ 288
++ + R +L++
Sbjct: 815 IIYEYCRRGDLKE 827
>gi|356557981|ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 706
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 153/336 (45%), Gaps = 34/336 (10%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD---LTPSSTHMYK 64
++ +K+KS V+ Y ++ F K+ D E LF E R ++ +T S+
Sbjct: 170 YFKQKVKSVRHVI---LYNVTLKLFRKVKDFEGAEKLFDEMLHRGVNPNLITFSTMISCA 226
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+C K+ + FE++ F G D +V +S+I ++ +A L+ A+
Sbjct: 227 SVCSLPHKAVKWFEMMPSF------GCEPDNNVCSSMIYAYTRTGNTDMALRLYDRAKAG 280
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK--NAELNISDCISCVIVNGFSKRRAYW 182
D VF L+ MY G L V MK A+ N++ + + G +KR
Sbjct: 281 KWHVDTAVFSGLIKMYGVSGNYVGCLNVYNDMKVLGAKPNLTTYNALLYAMGRAKRAR-- 338
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +Y ++IS G P TYA+++ AYCR A V+ EM++KG D ++ Y+ +
Sbjct: 339 DAKAIYGEMISNGLSPNWPTYAALLQAYCRARFNRDALNVYKEMKEKGKDLDILLYNMLF 398
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG-CEPNVWIYNSLMDMHGRAKNLRQLEK---------- 291
M G + +A+++ MK G C P+ + Y SL++M+ + ++E
Sbjct: 399 DMCANVGCVDEAVKIFEHMKSSGTCPPDSFTYASLINMYSSIGKILEMEAMFNEMMESGF 458
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
T+++ Y A+ D VK +N+ M+ G+
Sbjct: 459 EPNIIVLTSLVHCYGKAKRTDDVVKIFNQL-MDLGI 493
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 118/262 (45%), Gaps = 4/262 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++E M S G D+ ++ A+ + G+++ L+ ++ K + T ++ L
Sbjct: 238 WFEMMPSFGCEPDNNVCSSMIYAYTRTGNTDMALRLYDRAKAGKWHV---DTAVFSGLIK 294
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G SG L + DMK G + + Y +L+ + + A+ ++ E G+
Sbjct: 295 MYGVSGNYVGCLNVYNDMKVLGAKPNLTTYNALLYAMGRAKRARDAKAIYGEMISNGLSP 354
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ Y L V + MK ++ + ++ + + AVK++
Sbjct: 355 NWPTYAALLQAYCRARFNRDALNVYKEMKEKGKDLDILLYNMLFDMCANVGCVDEAVKIF 414
Query: 189 EQLISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
E + S G C P TYAS+IN Y IG + E +F EM + GF+ ++ +S+V YGK
Sbjct: 415 EHMKSSGTCPPDSFTYASLINMYSSIGKILEMEAMFNEMMESGFEPNIIVLTSLVHCYGK 474
Query: 248 TGRIRDAMRLVAKMKPKGCEPN 269
R D +++ ++ G P+
Sbjct: 475 AKRTDDVVKIFNQLMDLGISPD 496
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 21/198 (10%)
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
+ S ISC V + AVK +E + S GC P +S+I AY R G A
Sbjct: 217 ITFSTMISCASVCSLPHK-----AVKWFEMMPSFGCEPDNNVCSSMIYAYTRTGNTDMAL 271
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+++ + + +S ++ MYG +G + + MK G +PN+ YN+L+
Sbjct: 272 RLYDRAKAGKWHVDTAVFSGLIKMYGVSGNYVGCLNVYNDMKVLGAKPNLTTYNALLYAM 331
Query: 281 GRAKNLR----------------QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
GRAK R Y ++ AY AR + Y E + G +D
Sbjct: 332 GRAKRARDAKAIYGEMISNGLSPNWPTYAALLQAYCRARFNRDALNVYKEMKEKGKDLDI 391
Query: 325 AMAGIMVGVFSKLSQIEE 342
+ ++ + + + ++E
Sbjct: 392 LLYNMLFDMCANVGCVDE 409
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 22/313 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK G L+S Y +++ + G +K + E R + L TH+ + D+ G
Sbjct: 214 EMKQKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISL---DTHICNSIIDTFG 270
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G E LK F+ M+++G+ + + SLI + A LF + +E+G+ D +
Sbjct: 271 KYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPK 330
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+F+ ++ E+G + + ESMK + V+V+ + + + A + + L
Sbjct: 331 IFVTIISCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAGECVQAL 390
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S+G + + + NAY + GL + V M+ +G + +V + ++ +G GR
Sbjct: 391 KSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRY 450
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
+A+ + +K G P+V YTT++ A+ A++FD
Sbjct: 451 MEAISVYHHIKESGVSPDV-------------------VTYTTLMKAFIRAKKFDEVPII 491
Query: 312 YNEFRMNGGVIDR 324
Y E +G DR
Sbjct: 492 YKEMENDGCTPDR 504
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 137/308 (44%), Gaps = 22/308 (7%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
K GD ++ +L + E++ L+ +S Y L ++LG GR E F++M G
Sbjct: 96 KEGDLDRAMSLLSQMEAKGFHLSSTS---YACLIEALGNVGRTSEADMLFKEMVCYGYKP 152
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
++Y SL+ F + +A + KE ++ G+ R E + + Y+ G +E T +
Sbjct: 153 KLNLYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTWSTI 212
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
MK ++ + +V + + A++V E++ +G SII+ + +
Sbjct: 213 NEMKQKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKY 272
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G +A K+F +MQ++G +V ++S++ + K G A L M+ +G P+ I
Sbjct: 273 GELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKI- 331
Query: 274 NSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
+ T+IS ++D+ K++ ++ G A+ ++V +
Sbjct: 332 ------------------FVTIISCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDI 373
Query: 334 FSKLSQIE 341
+ + + +
Sbjct: 374 YGQYGKFQ 381
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 129/261 (49%), Gaps = 7/261 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILCD 68
E+++ GI LD+ I++ F K G+ ++ LF ++ E + ++ ++ + K C
Sbjct: 248 EEIRERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNS-LIKWHC- 305
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G + F DM+E+G+ DP ++ ++I + + ++ F+ + +G
Sbjct: 306 ---KEGDFMKAFHLFTDMQEQGLYPDPKIFVTIISCLGEQGKWDIIKKYFESMKIRGNKE 362
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
V+ LV +Y + G + E V+++K+ + +S I CV+ N ++++ + V
Sbjct: 363 YGAVYAVLVDIYGQYGKFQNAGECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVL 422
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ + ++G P V +INA+ G Y +A V+ +++ G VV Y++++ + +
Sbjct: 423 QIMEAEGIEPNIVMLNMLINAFGNAGRYMEAISVYHHIKESGVSPDVVTYTTLMKAFIRA 482
Query: 249 GRIRDAMRLVAKMKPKGCEPN 269
+ + + +M+ GC P+
Sbjct: 483 KKFDEVPIIYKEMENDGCTPD 503
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 78/201 (38%), Gaps = 19/201 (9%)
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+EG +++ + ++ M+ ++S ++ A ++++++ G P
Sbjct: 96 KEGDLDRAMSLLSQMEAKGFHLSSTSYACLIEALGNVGRTSEADMLFKEMVCYGYKPKLN 155
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
Y S++ + + GL A V EM G + Y + Y GR+ D + +M
Sbjct: 156 LYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTWSTINEM 215
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
K KG + NS M Y+ V+ Y + ++ E R G
Sbjct: 216 KQKG-----FPLNSFM--------------YSKVVGIYRDNGMWKKAIEVLEEIRERGIS 256
Query: 322 IDRAMAGIMVGVFSKLSQIEE 342
+D + ++ F K +++E
Sbjct: 257 LDTHICNSIIDTFGKYGELDE 277
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 24/136 (17%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ ++ Q+I +G V ++I+AY G + +++VF EM + +V+++SM+
Sbjct: 680 AMDIHSQVIKEGFQEDTVLCNALIHAYAWCGSLALSKQVFNEMGCRD----LVSWNSMLK 735
Query: 244 MYGKTGRIRDAMRLVAKMKP-----------KGC------EPNVWIYNSLMDMHGRAKNL 286
Y G+ +DA+ L +M C + V ++N + D HG +
Sbjct: 736 SYAIHGQTKDAVELFQRMNVCTDSATFVVLLSACSHVGFVDEGVKLFNCMSDDHGV---V 792
Query: 287 RQLEKYTTVISAYNMA 302
QL+ Y+ ++ Y A
Sbjct: 793 PQLDHYSCMVDLYGGA 808
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH ++++ S+G+ D Y ++ + ++ D + + ES DL+ ++ Y +
Sbjct: 200 LHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVAT---YNVF 256
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L K+ R +E ++ + KG+ D Y +L+ + E + EE+ E E G
Sbjct: 257 IRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGF 316
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ LV ++G + ++V +K + S + ++N K A
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAES 376
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ + +G P VTY+ +I+++C+ G A +M + G V YSS+++ +
Sbjct: 377 LFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHC 436
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++R A L +M G +PNV IY SL+
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSLI 467
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 124/285 (43%), Gaps = 11/285 (3%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N S K+K G+ Y ++ + K G ++ +LF + L P+
Sbjct: 335 NIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK--GLFPNDV- 391
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL DS K G+ L F M E GI Y+SLI + +++ A+ LF E
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G+ ++ ++ L+ Y +EG + + M ++ + +++G
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K++ +++ IP +VTY +I +C+ G +A ++ EM +KG Y +
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571
Query: 242 VAMYGKTGRIRDAMRLVAKMKP--------KGCEPNVWIYNSLMD 278
++ TGR+ +A + ++ +GC PNV Y +L++
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALIN 616
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 3/269 (1%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G+ D G YC ++ K+ + E A + E + PS + L D L K G
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFE--AGEEMMNEMIEFGFVPSEAAVSN-LVDGLRKKGNI 336
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
+K+ G+ VY +LI S ++ AE LF KG+ + + L
Sbjct: 337 GSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSIL 396
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ + + G ++ L + M + + +++G K AA +++++I+ G
Sbjct: 397 IDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGL 456
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P V Y S+I+ YC+ G A +++ EM KG ++++++ R+ +A +
Sbjct: 457 KPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANK 516
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
L +M PN YN L++ H + N
Sbjct: 517 LFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 123/280 (43%), Gaps = 14/280 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M ++ + Y ++E K G++ + L E + L P T+ Y+ L
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEK--GLVPD-TYTYRPLISG 574
Query: 70 LGKSGRAFEILKFFRDMKEK--------GILEDPSVYASLICSFASIAEVKVAEELFKEA 121
L +GR E +F D++ + G L + Y +LI I + AE L +E
Sbjct: 575 LCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREM 634
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
L + + + EG +EK +++ + + L + +++ GF K
Sbjct: 635 LASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFL-ANTVTYNILIRGFCKLGRI 693
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +V +I G P ++Y++II YCR G +A K++ M +G + VAY+ +
Sbjct: 694 QEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFL 753
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ TG + A L M +G +PN YNSL +HG
Sbjct: 754 IYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSL--IHG 791
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S+T + +L + ++ R + L R M + GIL + ++ I + ++A L
Sbjct: 143 STTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHL 202
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F E G+ D+ V+ +V E + EV+ M+++ ++S V + G K
Sbjct: 203 FDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCK 262
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ W AV++ L +G TY +++ C++ + E++ EM + GF A
Sbjct: 263 NQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAA 322
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
S++V K G I A LV K+K G P++++YN+L++
Sbjct: 323 VSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALIN 363
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 131/324 (40%), Gaps = 45/324 (13%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH+ KM GI Y ++ K+G +LF E + L + +Y L
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK---PNVVIYTSL 466
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
K G + + +M KGI + + +LI + A +LF E E +
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV 526
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF------SKRRA 180
+ + + L+ + +EG + E+++ M L +++G S+ R
Sbjct: 527 IPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEARE 586
Query: 181 YWAAVKVYEQLISQ--GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ---------- 228
+ ++ +Q +++ GC+P VTY ++IN C+IGL KAE + EM
Sbjct: 587 FMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTY 646
Query: 229 ------------------------KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+GF V Y+ ++ + K GRI++A ++ M
Sbjct: 647 ACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDS 706
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQ 288
G P+ Y++++ + R +L++
Sbjct: 707 GISPDCISYSTIIYEYCRRGDLKE 730
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 140/316 (44%), Gaps = 9/316 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD---LTPSSTHMY 63
L + +M+ GI D Y ++ A G ++ +F R ++ + P T Y
Sbjct: 234 LGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVF-----RTMNEGGVVPDIT-TY 287
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D+ GK R ++ + ++M G + + S Y L+ ++A I ++ A +F+ +E
Sbjct: 288 TYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQE 347
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G + + E + L+ +Y + G ++ E+ MK + +++ F + +
Sbjct: 348 AGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKE 407
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
V ++ + + P TY +I A + GL+ A+K+ + M +KG AY+ ++
Sbjct: 408 VVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIE 467
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
YG+ +A+ + M G +P + YN+L+ M R ++ E + + +AR
Sbjct: 468 AYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVAR 527
Query: 304 EFDMCVKFYNEFRMNG 319
E D FR G
Sbjct: 528 ERDSFNGVIEGFRQGG 543
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 144/311 (46%), Gaps = 22/311 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M + G+ Y ++ ++ + G E L E K + S Y + +S
Sbjct: 166 FEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELL---ERMKKERVSPSILTYNTVINS 222
Query: 70 LGKSGRAFE-ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ G +E +L F +M+ +GI D Y +L+C+ ++ AE +F+ E G++
Sbjct: 223 CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVP 282
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKV 187
D+ + LV + + ++K E+++ M + N+ + S V++ +++ A V
Sbjct: 283 DITTYTYLVDTFGKLNRLDKVSELLKEMASTG-NVPEISSYNVLLEAYARIGNIEDATGV 341
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ + GC+P TY+ ++ Y + G Y + ++F+EM+ + Y++++ ++G+
Sbjct: 342 FRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGE 401
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM------DMHGRAKN--LRQLEK-------- 291
G ++ + L M + EPN+ Y L+ +H AK L EK
Sbjct: 402 GGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKA 461
Query: 292 YTTVISAYNMA 302
YT VI AY A
Sbjct: 462 YTGVIEAYGQA 472
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 127/316 (40%), Gaps = 43/316 (13%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ + + F + GD ++ LF + R++ P+ H+Y I+ LG+ G + F
Sbjct: 110 FALVFKEFAQRGDWQRSLRLFKHMQ-RQIWCKPNE-HIYTIMISLLGREGLLEKCSDIFE 167
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEE---------------------------- 116
+M G+ Y +LI S+ + +V+ E
Sbjct: 168 EMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGG 227
Query: 117 --------LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
LF E +G+ D+ + L+ G+ ++ V +M +
Sbjct: 228 LDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTY 287
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+V+ F K ++ +++ S G +P +Y ++ AY RIG A VF MQ+
Sbjct: 288 TYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQE 347
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G YS ++ +YGK GR + L +MK EP+ YN+L+D+ G ++
Sbjct: 348 AGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKE 407
Query: 289 LEKYTTVISAYNMARE 304
+ V ++MA E
Sbjct: 408 V-----VTLFHDMAEE 418
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 40/285 (14%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ AG V ++ Y ++ + K G ++V LFLE K+ T Y L D G+
Sbjct: 345 MQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEM---KVSNTEPDAATYNTLIDVFGE 401
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G E++ F DM E+ + + Y LI + A+++ EKGM+ +
Sbjct: 402 GGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKA 461
Query: 133 FLKLVLMYIEEGMVEKTLEVVESM---------------------------------KNA 159
+ ++ Y + M E+ L + +M K
Sbjct: 462 YTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMG 521
Query: 160 ELNIS---DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ ++ D + VI GF + + A+K Y ++ +P + T ++++ YC GL
Sbjct: 522 DFGVARERDSFNGVI-EGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLV 580
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
++ + F E++ G V+ Y M+A+Y K+ R +A L+ +M
Sbjct: 581 DESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEM 625
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 143/332 (43%), Gaps = 22/332 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M S G V + Y ++EA+ +IG+ E +F + + P++ Y IL
Sbjct: 308 KEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQ--EAGCVPNA-ETYSILLGLY 364
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK GR E+ + F +MK D + Y +LI F K LF + E+ + ++
Sbjct: 365 GKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNM 424
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
E + L+ + G+ + +++ M + S ++ + + Y A+
Sbjct: 425 ETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNT 484
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P TY ++I + R GLY + E + ++M G + +++ ++ + + G+
Sbjct: 485 MNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQ 544
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVK 310
+A++ +M+ P+ R LE V+S Y +A D V+
Sbjct: 545 FEEAIKAYVEMEKSRLVPDE----------------RTLE---AVLSVYCIAGLVDESVE 585
Query: 311 FYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ E + +G + + +M+ V++K + E
Sbjct: 586 QFQEIKASGILPNVMCYCMMLAVYAKSDRWNE 617
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 114/237 (48%), Gaps = 32/237 (13%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+E + + G + + L+V ++ +L+++D ++ F++R + +++++
Sbjct: 77 DVETLINKLSSLPPRGSIARCLDVFKN----KLSLNDF--ALVFKEFAQRGDWQRSLRLF 130
Query: 189 EQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ + Q C P + Y +I+ R GL K +F EM G + V +Y++++ YG+
Sbjct: 131 KHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGR 190
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSL--------MDMHG--------RAKNLR-QLE 290
G+ ++ L+ +MK + P++ YN++ +D G R + ++ +
Sbjct: 191 NGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIV 250
Query: 291 KYTTVI---SAYNMAREFDMCVKFYNEFRMNGGVI-DRAMAGIMVGVFSKLSQIEEL 343
Y T++ S + E +M + NE GGV+ D +V F KL++++++
Sbjct: 251 TYNTLLCACSNRGLGDEAEMVFRTMNE----GGVVPDITTYTYLVDTFGKLNRLDKV 303
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 156/347 (44%), Gaps = 27/347 (7%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
S G+V Y +E K G + +F E ++R + P + + + ++ + GK+
Sbjct: 168 SPGLV----TYNTYLEVLNKSGSWQLAEDVFREMQNRGV---PPAVNTFTLMINIYGKAH 220
Query: 75 RAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ + F+ M++ L PS+ Y +LI + A AEE+F E + G + D+
Sbjct: 221 HSAKAEHLFQSMRKA--LCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYT 278
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ Y G EV E+M A + ++++ F + A +Y+ +
Sbjct: 279 YNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMK 338
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G P ++ +++A+ + G + AE ++ G + ++S++ YG +GR+
Sbjct: 339 KVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMD 398
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVI 296
L M+ C+P++ N+L++++ + + + E+ +T+++
Sbjct: 399 KMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLM 458
Query: 297 SAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
AY+ + + CV Y + + G + DRA A +++ Q++E+
Sbjct: 459 GAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLLSSCRGPEQVKEV 505
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 104/220 (47%), Gaps = 6/220 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS-STHMYKILCD 68
+E M AG+ D Y +++AF + G A++ +K+ P+ +H+ +L
Sbjct: 299 FETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSM--KKVGFKPTMKSHI--LLLS 354
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ K+GR + F R ++ G+ D ++ SL+ ++ + + E L++ +
Sbjct: 355 AFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKP 414
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ L+ +Y + G +E+ E+ S+++ ++ +SKR+ Y V VY
Sbjct: 415 DIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVY 474
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
++++ GCIP + T A ++ + CR K IE Q+
Sbjct: 475 QKMLIAGCIPDRAT-AKVLLSSCRGPEQVKEVTDMIETQR 513
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V++ +S+ A +V ++ C PG VTY + + + G + AE VF EMQ +
Sbjct: 141 VLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNR 200
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
G V ++ M+ +YGK A L M+ C P+++ Y +L++ H R N
Sbjct: 201 GVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGN 256
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++++ + + + + A + + C+P + ++ ++ AY R G +AE+V EM++
Sbjct: 106 MLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMKES 165
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+V Y++ + + K+G + A + +M+ +G P V + +++++G+A + +
Sbjct: 166 NCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKA 225
Query: 290 EK----------------YTTVISAYNMAREFDMCVK---FYNEFRMNGGVID 323
E YT +I+A+ ARE + CV+ + E + G V D
Sbjct: 226 EHLFQSMRKALCPPSLFTYTALINAH--AREGN-CVRAEEIFAELQSVGFVPD 275
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 23/280 (8%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCD 68
+++KS + +D Y ++ ++ G + +LF E E R K D+ Y +L
Sbjct: 424 DELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVA-----YNVLAA 478
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
++ FE + M+ +G+ + + + +I S +V+ AEE F + + +
Sbjct: 479 GFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEI 538
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVES-----------MKNAELNISDCISCVIVNGFSK 177
+E++ LV Y E ++EK+ E+ E+ MK +++ S + + NG +
Sbjct: 539 SVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNME 598
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A ++ I G P VTY +IN YC+ +A ++F +M+++G V
Sbjct: 599 -----GAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVT 653
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y+ M+ Y K +R+A L MK +G +P+V Y ++
Sbjct: 654 YTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVII 693
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 132/296 (44%), Gaps = 40/296 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ + KS G++ + Y +++A K GD E V +F E + +D ++ Y +
Sbjct: 213 FVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVD---DDSYCYATFIEG 269
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ R+ +D + + Y ++I F + ++ AE +F E E++G++ D
Sbjct: 270 LCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPD 329
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI--SCV------------IVNGF 175
+ V+ LV Y +K L V +SM + + ++C+ SC+ +V+ F
Sbjct: 330 VYVYCALVHGYCNSRNFDKALAVYKSMISRGIK-TNCVIFSCILHCLDEMGRALEVVDMF 388
Query: 176 S--KRRAYWAAVKVYEQLISQGCIPGQVT--------------------YASIINAYCRI 213
K + K Y L C G+V Y ++IN Y
Sbjct: 389 EEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQ 448
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
G +A+ +F EM+++GF VVAY+ + A + + +AM L+ M+ +G EPN
Sbjct: 449 GKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPN 504
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 115/285 (40%), Gaps = 9/285 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+ K +G+ +D Y + +A K+G + + E +S +LD+ Y L +
Sbjct: 388 FEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDV---DMKHYTTLING 444
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ E F++M+E+G D Y L F A +L E +G+ +
Sbjct: 445 YFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPN 504
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF------SKRRAYWA 183
++ G VE+ E +K + IS I +VNG+ K
Sbjct: 505 STTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKE 564
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A + ++ P +V Y+ I A C G A +F GF V Y+ M+
Sbjct: 565 AFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMIN 624
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
Y KT + +A L MK +G P+ Y +++ + + LR+
Sbjct: 625 GYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLRE 669
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 101/255 (39%), Gaps = 25/255 (9%)
Query: 91 ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
IL + + LI EV +A LF + G++ + + ++ ++G E +
Sbjct: 186 ILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVV 245
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
V + MK A ++ + G K V + ++ + Y ++I +
Sbjct: 246 RVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGF 305
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
C +AE VF+EM+++G V Y ++V Y + A+ + M +G + N
Sbjct: 306 CNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNC 365
Query: 271 WIYNSLM---DMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
I++ ++ D GRA + V + EF+ +G IDR
Sbjct: 366 VIFSCILHCLDEMGRALEV----------------------VDMFEEFKESGLFIDRKAY 403
Query: 328 GIMVGVFSKLSQIEE 342
I+ KL ++++
Sbjct: 404 NILFDALCKLGKVDD 418
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 95/255 (37%), Gaps = 51/255 (20%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y I+ +L K G +++ F +MKE G+ +D YA+ I E
Sbjct: 226 YTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFI-----------------E 268
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
K DL V++ + ++ ++ GF
Sbjct: 269 GLCKNNRSDL------------------GYAVLQDYRTRNAHVHKYAYTAVIRGFCNETK 310
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A V+ ++ QG +P Y ++++ YC + KA V+ M +G V +S
Sbjct: 311 LDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSC 370
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------------MHGRAKNLR 287
++ + GR + + + + K G + YN L D M K+++
Sbjct: 371 ILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQ 430
Query: 288 ---QLEKYTTVISAY 299
++ YTT+I+ Y
Sbjct: 431 LDVDMKHYTTLINGY 445
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y E M GI + Y +M A + D+ A + E +K +P Y IL
Sbjct: 239 LQYREDMVQRGIAMTVATYNLLMHALFM--DARASDAYAVLEEMQKNGFSPD-VFTYNIL 295
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ K G + L+ F +M +KG+ Y SLI F+ +V+ + LF A +KG+
Sbjct: 296 INGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGI 355
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ ++ L+ + G +E+ E++ M+ + D ++ GF A
Sbjct: 356 RPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEART 415
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ +++ +G P V+Y ++I+ Y G A +V EM KGF+ ++ Y++++
Sbjct: 416 LIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLC 475
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K + DA L+ +M KG P+ Y SL++
Sbjct: 476 KIRQGDDAENLMKEMVAKGITPDDSTYISLIE 507
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 2/209 (0%)
Query: 74 GRAFEILKFFRDMKEKG-ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR L+ R+M+E+G I D YA+LI + I ++ A ++F E KG + V
Sbjct: 161 GRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAV 220
Query: 133 -FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ Y + G ++ L+ E M + ++ ++++ A V E++
Sbjct: 221 MYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEM 280
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
G P TY +IN YC+ G KA +VF EM QKG V Y+S++ ++ + G++
Sbjct: 281 QKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQV 340
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
++ RL KG P+V +YN+L++ H
Sbjct: 341 QETDRLFNVAVKKGIRPDVVMYNALINSH 369
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 131/275 (47%), Gaps = 3/275 (1%)
Query: 4 QSKLHYYEKMKS-AGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
Q+ L +M+ GI D Y ++ + KIG E +F E + K ++ PS+ M
Sbjct: 164 QAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLT-KGEVAPSAV-M 221
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L G+ L++ DM ++GI + Y L+ + A A + +E +
Sbjct: 222 YNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQ 281
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G D+ + L+ Y +EG +K LEV E M + + ++ FS++
Sbjct: 282 KNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQ 341
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+++ + +G P V Y ++IN++C G +A ++ EM++K + Y++++
Sbjct: 342 ETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLM 401
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ GR+ +A L+ +M +G +P++ YN+L+
Sbjct: 402 RGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLI 436
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 133/323 (41%), Gaps = 14/323 (4%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L Y ++KS + + ++ + S ALF + +L P T +
Sbjct: 68 TSLRLYAQLKSLSVPIPVASLHPLLSSL----PSAPAFALFADIYRLRL---PLCTTTFN 120
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
I+ L +G+ L+ R M + Y ++I F + V+ A E+ +E E+
Sbjct: 121 IMLRHLCATGKPVRALELLRQMPRPNAV----TYNTVIAGFCARGRVQAALEVMREMRER 176
Query: 125 G-MLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRAYW 182
G + D + L+ + + G +E ++V + M E+ S + ++ G+
Sbjct: 177 GGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLD 236
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ E ++ +G TY +++A S A V EMQ+ GF V Y+ ++
Sbjct: 237 VALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILI 296
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
Y K G + A+ + +M KG Y SL+ + R +++ ++ V +
Sbjct: 297 NGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIR 356
Query: 303 REFDMCVKFYNEFRMNGGVIDRA 325
+ M N GG ++RA
Sbjct: 357 PDVVMYNALINS-HCTGGDMERA 378
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 132/318 (41%), Gaps = 38/318 (11%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L +++ + G+VLD Y +M+AF K G + K +F + K P T +Y
Sbjct: 317 EEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQ--KAGCMP-DTVVY 373
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILED----------------------------- 94
+L LGK G+ E L+ DM KGI+ D
Sbjct: 374 NVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKR 433
Query: 95 ----PSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
P V Y +L+ + A +LF E + + DL F L+ + G +E
Sbjct: 434 RKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMED 493
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
LE + + I +++GF + ++++ +I C P +TY ++
Sbjct: 494 ALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVL 553
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+ R G S A ++ EM ++G + Y+ ++ G++ DA L +M KG P
Sbjct: 554 GFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNP 613
Query: 269 NVWIYNSLMDMHGRAKNL 286
++ Y++L ++ K++
Sbjct: 614 DMQTYSALPNLSTPNKSV 631
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 117/272 (43%), Gaps = 12/272 (4%)
Query: 39 EKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVY 98
E+ LF E E + L Y L D+ GK+GRA + L+ F +M++ G + D VY
Sbjct: 317 EEALTLFQEAEQGGVVL---DVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVY 373
Query: 99 ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
LI +V A EL ++ KG++ D + ++ + G EK MK
Sbjct: 374 NVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKR 433
Query: 159 AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK 218
+ + ++NG K R A +++++ + C+P T+ ++I+ + G
Sbjct: 434 RKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMED 493
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A + + + G Y+++++ + ++G++ L M C P+ Y L+
Sbjct: 494 ALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVL 553
Query: 279 MHGR------AKNLRQ---LEKYTTVISAYNM 301
R A L Q E +T ++ YN+
Sbjct: 554 GFSRRGHTSMAMELLQEMVREGHTPALATYNV 585
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 7/280 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH+ M + D+ Y ++ A + G +VA+ E + D S Y +
Sbjct: 219 LHH---MTAHACARDAFTYGILVNAHCRAGQMHEVASFM---ELARHDGCALSAVNYNFI 272
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ GR E + F K + D Y +L+ + +++ A LF+EAE+ G+
Sbjct: 273 IQGFIRCGRLAEATQLFESTMTKESVPDVFTY-NLLIALCKSKQLEEALTLFQEAEQGGV 331
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ + L+ + + G K LEV +M+ A + V+++ K+ A++
Sbjct: 332 VLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALE 391
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ E + +G +P TY +I+ G Y KA F M+++ VV Y++++
Sbjct: 392 LLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLK 451
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
K R +A L +M+ C P++ + +L+D +A +
Sbjct: 452 KLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRM 491
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 109/266 (40%), Gaps = 4/266 (1%)
Query: 14 KSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
+ G+ L + ++AF + GD + AA+ + + R+ + T + L +
Sbjct: 45 RQKGVGLSEVTCTECIQAFGRAGDLD--AAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEV 102
Query: 74 GRAFEILKFFRDMKEK-GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R + + F DM+E D Y +LI + + A ++F+ +++G + V
Sbjct: 103 RRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAV 162
Query: 133 -FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F LV+ + L V + M A L + +++ + A ++ +
Sbjct: 163 SFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHM 222
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ C TY ++NA+CR G + + G V Y+ ++ + + GR+
Sbjct: 223 TAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRL 282
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A +L K P+V+ YN L+
Sbjct: 283 AEATQLFESTMTKESVPDVFTYNLLI 308
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 99/243 (40%), Gaps = 11/243 (4%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P H + + K GR + + ++++KG+ I +F ++ A
Sbjct: 15 PVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAAMG 74
Query: 117 LFKEAEEKGMLR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI---- 171
+ + + D F + E VE+ + + + M+ DC V+
Sbjct: 75 MLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRET----CDCAPDVVAYNT 130
Query: 172 -VNGFSKRRAYWAAVKVYEQLISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+ G+ K A+ ++ +L +G C P V++ +++ C++ + A VF EM
Sbjct: 131 LIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGA 190
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G V ++++ + G +R A RL+ M C + + Y L++ H RA + ++
Sbjct: 191 GLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEV 250
Query: 290 EKY 292
+
Sbjct: 251 ASF 253
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 126/270 (46%), Gaps = 7/270 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--CESRKLDLTPSSTHMYKILCD 68
++M AG D Y +++A G LFL+ S K D Y L D
Sbjct: 286 KRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRV-----TYITLLD 340
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G I +F+ +M+ G L D + LI + + +V A +++G+
Sbjct: 341 KFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAP 400
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+L + L+ + +++ LE+ SM++ L + + ++ + K A+K +
Sbjct: 401 NLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTF 460
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ + G +P V + + + G +A++ F +++ G + Y+ ++ YGK
Sbjct: 461 EKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKA 520
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR+ DA++L+++M+ GC+P V I NSL+D
Sbjct: 521 GRVDDAIKLLSEMEENGCDPEVVIINSLID 550
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 125/267 (46%), Gaps = 3/267 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M G ++ + ++ K +K L+ + S TP + Y L D
Sbjct: 846 YEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWT---YGPLIDG 902
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K GR E +FF +M + G + + +Y L+ F +V+ A ELF+ ++G+ D
Sbjct: 903 LLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPD 962
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+ + +V G V+ L E +K + L+ +++NG + + A+ +++
Sbjct: 963 LKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFD 1022
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ ++G P TY ++I G+ +A K++ E+Q KG + V Y++++ + +G
Sbjct: 1023 EMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSG 1082
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A + KM GC PN + L
Sbjct: 1083 NPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 125/280 (44%), Gaps = 5/280 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KMK++ D Y +++ F GD + + + E E+ D + IL D+
Sbjct: 320 FLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEA---DGYLPDVVTFTILIDA 376
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ E MK++G+ + Y +LIC + + A ELF E G+
Sbjct: 377 LCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETT 436
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVY 188
++ + Y + G K ++ E MK + + + ++C + +++ A + +
Sbjct: 437 AYTYILFIDYYGKSGESGKAIKTFEKMKTNGI-VPNIVACNASLYSLAEQGRLEEAKEFF 495
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
L G P +TY ++ Y + G A K+ EM++ G D VV +S++ K
Sbjct: 496 NGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKA 555
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
R+ +A ++ +MK P V YN+L+ G+ +++
Sbjct: 556 DRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQE 595
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KMK+AG D Y ++A +G S K+ LF E +T + I+
Sbjct: 811 FYKMKNAGCTPDVFTYNLFLDA---LGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFG 867
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KS + + + D+ P Y LI + ++ A++ F+E + G + +
Sbjct: 868 LVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPN 927
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ L+ + ++G VE E+ M + ++V+ A+ +E
Sbjct: 928 CPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFE 987
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L G P V Y +IN R +A +F EM+ +G + Y++++ G G
Sbjct: 988 ELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAG 1047
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+ +A ++ +++ KG EPNV+ YN+L+ H + N
Sbjct: 1048 MVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGN 1083
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 144/352 (40%), Gaps = 54/352 (15%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y +M S GI Y +M A K D E V L E ES L L P+ + + I
Sbjct: 212 LKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMES--LGLRPN-IYTFTIC 268
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
LG++G+ E + M + G D Y LI + + ++ A+ELF + +
Sbjct: 269 IRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSH 328
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D ++ L+ + + G ++ E +W+ ++
Sbjct: 329 KPDRVTYITLLDKFSDHGDLDAIKE-----------------------------FWSEME 359
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ G +P VT+ +I+A C++G +A M+++G + Y++++
Sbjct: 360 ------ADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLL 413
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----KNLRQLEKYTT-------- 294
+ R+ +A+ L M+ G E + Y +D +G++ K ++ EK T
Sbjct: 414 RLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIV 473
Query: 295 --VISAYNMARE--FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
S Y++A + + +F+N + G D I++ + K ++++
Sbjct: 474 ACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDD 525
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 120/265 (45%), Gaps = 3/265 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G+ + Y ++ ++ ++ LF ES L+ T + Y + D GK
Sbjct: 393 MKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETT---AYTYILFIDYYGK 449
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
SG + + +K F MK GI+ + + + S A ++ A+E F ++ G+ D
Sbjct: 450 SGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAIT 509
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ Y + G V+ ++++ M+ + I +++ K A K+++++
Sbjct: 510 YNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMK 569
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
P VTY +++ + G +A +F M +++++++ K G +
Sbjct: 570 EMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVD 629
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLM 277
A++++ +M C P+V YN+++
Sbjct: 630 LALKMLFRMTEMNCFPDVLTYNTVI 654
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 114/258 (44%), Gaps = 7/258 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYK 64
L + M+S G+ + Y ++ + K G+S K F + ++ + ++ + +Y
Sbjct: 422 LELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLY- 480
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
SL + GR E +FF +K+ G+ D Y L+ + V A +L E EE
Sbjct: 481 ----SLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEEN 536
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G ++ + L+ + V++ ++ + MK +L + ++ G K A
Sbjct: 537 GCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEA 596
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++ +I+ C P +++ ++++ C+ G A K+ M + V+ Y++++
Sbjct: 597 TALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYG 656
Query: 245 YGKTGRIRDAMRLVAKMK 262
K R+ A L +MK
Sbjct: 657 LIKENRVNYAFWLFHQMK 674
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 7/203 (3%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTHMYKI 65
++E+M G + + Y +M F K GD E LF E + DL Y I
Sbjct: 914 QFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKS-----YSI 968
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+ D L G+ + L +F ++K G+ D Y +I V+ A LF E +G
Sbjct: 969 MVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRG 1028
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ DL + L+L GMVE+ ++ E ++ L + ++ G S A
Sbjct: 1029 ITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAY 1088
Query: 186 KVYEQLISQGCIPGQVTYASIIN 208
VY++++ GC P T+A + N
Sbjct: 1089 AVYKKMMVGGCRPNTGTFAQLPN 1111
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 106/234 (45%), Gaps = 1/234 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TPS Y L D L K+ F MK G D Y + + ++K
Sbjct: 784 ITPS-LEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKEL 842
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+L++E +G + ++ ++ ++K +++ + + + + + +++G
Sbjct: 843 FDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDG 902
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K A + +E+++ GC+P Y ++N + + G A ++F M ++G
Sbjct: 903 LLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPD 962
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ +YS MV G++ DA+ ++K G +P++ YN +++ GR++ + +
Sbjct: 963 LKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEE 1016
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 15/263 (5%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
S + +EKMK+ GIV + + + + G E+ F +K L P +
Sbjct: 453 SGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGL--KKCGLAPDAI-T 509
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL GK+GR + +K +M+E G + + SLI + V A ++F+ +
Sbjct: 510 YNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMK 569
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-----KNAELNISDCISCVIVNGFSK 177
E + + + L+ +EG V++ + + M ++ + + C+ NG
Sbjct: 570 EMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVD 629
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A+K+ ++ C P +TY ++I + + A +F +M++ + V
Sbjct: 630 -----LALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPD-YVT 683
Query: 238 YSSMVAMYGKTGRIRDAMRLVAK 260
+++ K GRI DA R VAK
Sbjct: 684 LCTLLPGVIKDGRIEDAFR-VAK 705
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 84/210 (40%), Gaps = 19/210 (9%)
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
++ L+ + ++ G + L+V M + + S ++ KRR + + +++
Sbjct: 195 YIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEME 254
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G P T+ I R G +A + M G VV Y+ ++ G++
Sbjct: 255 SLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLN 314
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFY 312
+A L KMK +P+ Y +L+D ++ + D +F+
Sbjct: 315 NAKELFLKMKASSHKPDRVTYITLLD-------------------KFSDHGDLDAIKEFW 355
Query: 313 NEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+E +G + D I++ K+ +++E
Sbjct: 356 SEMEADGYLPDVVTFTILIDALCKVGKVDE 385
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 2/257 (0%)
Query: 38 SEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
SE F E L TH +KI+ + LG++ + DM KG+ D +
Sbjct: 134 SEHALNFFRWVERAGLFQHDRETH-FKII-EILGRASKLNHARCILLDMPNKGVQWDEDL 191
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ LI S+ V+ A ++F++ +E G+ R ++ + L + G +M
Sbjct: 192 FVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGRYMMAKRYFNAML 251
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
N + V++ GF A + YE + S+G P VTY ++IN YCR +
Sbjct: 252 NEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMME 311
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+AE+ F EM+ K V++Y++M+ Y R DA+RL +MK G +PN Y++L+
Sbjct: 312 EAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLL 371
Query: 278 DMHGRAKNLRQLEKYTT 294
A+ L + K T
Sbjct: 372 PGLCDAEKLPEARKILT 388
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 116/278 (41%), Gaps = 13/278 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+YE MKS GI D Y ++ + + E+ F E + + + T S Y +
Sbjct: 281 FYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVIS---YTTMIK 337
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML- 127
RA + L+ F +MK G + Y++L+ ++ A ++ E +
Sbjct: 338 GYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAP 397
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+D +F++L+ + G ++ + V+++M + +++ K Y AVK+
Sbjct: 398 KDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKL 457
Query: 188 YEQLISQGCI--PGQV------TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
E L+ + I P Y II C G KA+ F ++ +KG VA++
Sbjct: 458 LENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQD-EVAFN 516
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+++ + K G A ++ M +G + Y L+
Sbjct: 517 NLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLI 554
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 104/276 (37%), Gaps = 44/276 (15%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST-----H 61
+H + M I ++G Y ++E K G ++ L +++ L P ST
Sbjct: 420 MHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEAS 479
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y ++ L G+ + FFR + +KGI +D + +LI A +A E+ K
Sbjct: 480 AYNLIIQYLCNHGQTGKADTFFRQLLKKGI-QDEVAFNNLIRGHAKEGNPDLAFEMLKIM 538
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ RD E + L+ Y+ +G ++SM I NG S
Sbjct: 539 GRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSM--------------IENGHS----- 579
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
P + S++ + G A +V M KG + + + +
Sbjct: 580 ----------------PDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKI 623
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G +A+ + + C P+ +NSL+
Sbjct: 624 LEALFMRGHDEEALGRINLLMNCNCPPD---FNSLL 656
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 16/303 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M+ I D Y ++ K G + LF E + R L P+ + L D
Sbjct: 282 KTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR--GLRPNGI-TFTALIDGQ 338
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+S R + + M G+ D +Y +L+ + +V A +L E + GM D
Sbjct: 339 YRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDK 398
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ Y +EG +E +E+ + M + + + +++GF + A + +
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G P TY +I+ YC+ G K+ EMQ G V+ Y+ ++ K G+
Sbjct: 459 MVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ 518
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK----------YTTVIS 297
+++A L+ M G P+ YN L++ H G+A++L +L YT+++S
Sbjct: 519 MKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTSLVS 578
Query: 298 AYN 300
YN
Sbjct: 579 EYN 581
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 19/285 (6%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y IL + K G + F +++++G+ + +LI +
Sbjct: 220 PPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFR 279
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L K EE + D+ + L+ +EG ++ ++ + M+ L + +++G
Sbjct: 280 LKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQY 339
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ R +A+ Y Q+++ G P V Y +++N C++G +KA K+ EM+ G +
Sbjct: 340 RSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKI 399
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
Y++++ Y K G + AM + M +G + + +L+ R +R E+
Sbjct: 400 TYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM 459
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNG---GVI 322
YT VI Y M K E ++NG GVI
Sbjct: 460 VEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVI 504
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 102/242 (42%), Gaps = 16/242 (6%)
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ E E G ++ + L+ + +EG + + ++ L + ++NG
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K R ++ + + P TY+ +I+ C+ G AE++F EMQQ+G +
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
+++++ ++ R+ AM +M G +P++ +YN+L++ + ++ + K
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
YTT+I Y + + ++ G V+D ++ F + ++
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449
Query: 341 EE 342
+
Sbjct: 450 RD 451
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 5/257 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y I++ F+K G+ +K LF E + P Y L D L K+ + +
Sbjct: 206 YSTIIDGFFKEGEVDKAYFLFDEMIGQGF---PPDVVTYSSLIDGLCKAQAMNKAEAILQ 262
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M +KG++ + Y +I + S+ +++ A L K+ G+ D+ ++ L+ Y + G
Sbjct: 263 HMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIG 322
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ V +SM + I ++++G++ + A + + +I G +
Sbjct: 323 RCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFN 382
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+I AY + G KA F EM+Q G VV+YS+++ + K GR+ DA+ +M +
Sbjct: 383 ILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSE 442
Query: 265 GCEPNVWIYNSLMDMHG 281
G PN+ + SL +HG
Sbjct: 443 GLSPNIISFTSL--IHG 457
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 127/274 (46%), Gaps = 4/274 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ ++++ +M S G+ + + ++ IG+ +KV L E +R + P + M
Sbjct: 430 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIH--PDAIFMN 487
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+ D+L K GR E FF + G+ + Y +LI + + ++ + + F
Sbjct: 488 TIM-DNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVS 546
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D + L+ Y + G VE L + M ++ S +I++G + A
Sbjct: 547 IGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVA 606
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++Y +++ +G TY +++ C +A ++F +++ K F+ V ++ ++
Sbjct: 607 ARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVIN 666
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K GRI +A L + M +G P+V Y SLM
Sbjct: 667 ALLKVGRIDEAKSLFSAMVLRGPVPHVITY-SLM 699
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 127/277 (45%), Gaps = 5/277 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+KM +G+ D Y +++ + KIG + ++F + RK P+ST +Y IL
Sbjct: 297 KKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVF-DSMVRK-GQKPNST-IYHILLHGY 353
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G ++ M GI + + LIC++A V A F E + G+ D+
Sbjct: 354 ATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDV 413
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ + + G VE + M + L+ + +++G + ++ +
Sbjct: 414 VSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFE 473
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I++G P + +I++ C+ G +A+ F + G VV+Y++++ Y G+
Sbjct: 474 MINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGK 533
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+ ++++ +M G P+ W YN+L++ G KN R
Sbjct: 534 MDESIKQFDRMVSIGLRPDSWTYNALLN--GYFKNGR 568
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 124/306 (40%), Gaps = 18/306 (5%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D P + IL + K G + + F +M++ G+ D Y+++I I V+
Sbjct: 372 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVED 431
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A F + +G+ ++ F L+ G +K E+ M N ++ I++
Sbjct: 432 AVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMD 491
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
K A ++ +I G P V+Y ++I+ YC +G ++ K F M G
Sbjct: 492 NLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRP 551
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE-----PNVWIYNSL------------ 276
Y++++ Y K GR+ DA+ L +M K + N+ ++
Sbjct: 552 DSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELY 611
Query: 277 MDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
M M R LR +E Y TV+ D ++ + + R +D I++ K
Sbjct: 612 MKMVDRGTQLR-IETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLK 670
Query: 337 LSQIEE 342
+ +I+E
Sbjct: 671 VGRIDE 676
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 80/178 (44%), Gaps = 1/178 (0%)
Query: 53 LDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVK 112
+ L P S Y L + K+GR + L +R+M K + ++ +
Sbjct: 547 IGLRPDSW-TYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIV 605
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
A EL+ + ++G +E + ++ E V++ L + E +++ E + +++
Sbjct: 606 AARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVI 665
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
N K A ++ ++ +G +P +TY+ +I + GL +++ +F+ M++ G
Sbjct: 666 NALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNG 723
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQG---CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
++ G + A+++ + + G C P V+Y++II+ + + G KA +F EM
Sbjct: 171 LIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMI 230
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+GF VV YSS++ K + A ++ M KG PN YN ++
Sbjct: 231 GQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMI 280
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC---VVAYSSMVA 243
V+ ++ G P +Y ++I C +A ++ + M G C VV+YS+++
Sbjct: 152 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIID 211
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ K G + A L +M +G P+V Y+SL+D +A+ + + E
Sbjct: 212 GFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAE 258
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 132/282 (46%), Gaps = 12/282 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKI 65
Y +M+ G+V D Y ++ F + G D+ +V + C +T Y
Sbjct: 3 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT------YNT 56
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + L K R + +M+E+G+ D + +LI + ++ A +LF +
Sbjct: 57 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 116
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D+ + L+ +G ++K ++ + M + E+ + ++++ ++ A
Sbjct: 117 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 176
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+++I++G +P +TY SII YCR G SK +K +M ++ Y++++ Y
Sbjct: 177 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 236
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAK 284
K ++ DA +L+ M+ + +P+V YN L++ +HG +
Sbjct: 237 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 278
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 3/225 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ M + + D Y +++ + GD +K L+ + SR ++ P+ Y IL
Sbjct: 106 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR--EIFPNHV-TYSIL 162
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DS + G+ + F +M KGIL + Y S+I + V ++ ++ +
Sbjct: 163 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 222
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
DL + L+ YI+E + +++ M+ ++ +++NGFS A
Sbjct: 223 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 282
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++E++ ++G P + TY S+IN + G +A ++ EM Q+GF
Sbjct: 283 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGF 327
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 36/244 (14%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E R L P +Y ++ ++G + L+ +M G L D Y +L+
Sbjct: 6 EMRCFGLVPDGV-IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 64
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ AE L E E+G+ DL F L+ Y EG ++K
Sbjct: 65 RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK-------------------- 104
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
A+++++ +++Q P VTY ++I+ CR G KA ++ +M
Sbjct: 105 ---------------ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 149
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ V YS ++ + + G++ DA + +M KG PN+ YNS++ + R+ N+ +
Sbjct: 150 REIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSK 209
Query: 289 LEKY 292
+K+
Sbjct: 210 GQKF 213
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 3/259 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M+ G+ D + ++ + G +K LF +++L P Y L D +
Sbjct: 75 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL--RPDIV-TYNTLIDGM 131
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G + + DM + I + Y+ LI S +V+ A E KG+L ++
Sbjct: 132 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 191
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y G V K + ++ M +++ +++G+ K A K+
Sbjct: 192 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 251
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + P VTY +IN + G +A +F +M KG + Y SM+ + G
Sbjct: 252 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 311
Query: 251 IRDAMRLVAKMKPKGCEPN 269
++A +L +M +G P+
Sbjct: 312 SKEAFQLHDEMLQRGFAPD 330
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 129/314 (41%), Gaps = 3/314 (0%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L E M G+V Y +++ KI E +L +E +S + L H
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL---DNH 313
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y +L D L K A +M GI P +Y IC + ++ A+ LF
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G++ + + L+ Y E V + E++ MK + IS +V G
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + +++I+ GC P V Y ++I + + + A +V EM+++G + Y+S+
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ K R+ +A + +M G +PN + Y + + + A +KY + +
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 302 AREFDMCVKFYNEF 315
+C NE+
Sbjct: 554 LPNKVLCTGLINEY 567
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 127/296 (42%), Gaps = 16/296 (5%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L + ++ R + ++ ++MKE+GI D Y SLI + + A E
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G+ + + + YIE + V+ M+ + + + ++N + K+
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKV 573
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A Y ++ QG + TY ++N + AE++F EM+ KG V +Y +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------- 291
+ + K G ++ A + +M +G PNV IYN L+ R+ + + ++
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
Y T+I Y + + + ++E ++ G V D + +V +L+ +E
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 139/295 (47%), Gaps = 23/295 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L + L K+ + + + FR+M+ KGI D Y LI F+ + ++ A +F E
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G+ ++ ++ L+ + G +EK E+++ M L+ + C I++G+ K
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++++ +G +P Y ++++ CR+ +A +F +KG +++++
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALI 773
Query: 243 AM---YGKTGRIRDAM-RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK 291
+GKT + + RL+ + +PN YN ++D + NL Q++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 292 ---------YTTVISAYN-MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
YT++++ Y+ M R +M ++E G D M +++ F K
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEM-FPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 13/299 (4%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q +++M G+ + Y ++ F + G+ EK L E + L P++
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH--PNAV- 698
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D KSG E + F +MK KG++ D VY +L+ + +V+ A +F
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-T 757
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN----ISDCISCVIVNGFSK 177
+KG F L+ + G E EV+ + + + +D ++++ K
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
AA +++ Q+ + +P +TY S++N Y ++G ++ VF E G + +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPK-----GCEPNVWIYNSLMDMHGRAKNLRQLEK 291
YS ++ + K G A+ LV +M K GC+ ++ +L+ + + EK
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 158/411 (38%), Gaps = 116/411 (28%)
Query: 43 ALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI 102
A+F+ S L+L P + K+L D+L + R ++ M E+ ++ D Y LI
Sbjct: 170 AVFVFSSSMGLELVPRLSRC-KVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLI 228
Query: 103 CSFASIAEVKVAEE-LFK-EAEEKGMLRDLEVFLKLVLMYIEEGMVE------------- 147
+ V++ ++ LFK E E + +++ LKL I +G+V
Sbjct: 229 IAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLC 288
Query: 148 --KTLEVVESM--------------------------KNAE-------------LNIS-- 164
K LE +S+ +NA+ +NI
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPY 348
Query: 165 --DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
DC CV+ SK A +++ +I+ G IP YAS+I YCR + ++
Sbjct: 349 MYDCCICVM----SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYEL 404
Query: 223 FIEMQQK-----------------------------------GFDKCVVAYSSMVAMYGK 247
+EM+++ G VV Y++++ + +
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
R DAMR++ +MK +G P+++ YNSL+ +AK + +
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y IS Y A EF K+ E R G + ++ + ++ + K ++ E
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIE 575
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 44/244 (18%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF------------------------ 45
+++MK G+V DS Y +++ ++ D E+ +F
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKF 779
Query: 46 ------LECESRKLD-----LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
E +R +D + Y I+ D L K G + F M+ ++
Sbjct: 780 GKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPT 839
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y SL+ + + +F EA G+ D ++ ++ +++EGM K L +V+
Sbjct: 840 VITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVD 899
Query: 155 SM--KNA-----ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
M KNA +L+IS C + +++GF+K A KV E ++ IP T +I
Sbjct: 900 QMFAKNAVDDGCKLSISTCRA--LLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Query: 208 NAYC 211
N C
Sbjct: 958 NESC 961
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 5/276 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KMK G + Y ++ + G E ++ + + L P++ Y L + L
Sbjct: 332 KMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD--GLVPTAV-TYSALINQLY 388
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
GR L F M L + Y +I F SI ++ A +F + + G ++
Sbjct: 389 VEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVI 448
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ ++ +Y ++G + + ++E MK L + +++GFS+ A ++ ++
Sbjct: 449 TYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEM 508
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ G P VTY +IIN Y + A +F +M + G Y+ M++ + KT RI
Sbjct: 509 VEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRI 568
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+A KM +G PNV Y S +D G KN R
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFID--GLCKNGR 602
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 137/349 (39%), Gaps = 54/349 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G +S Y ++ G E+ + E + ++ T H Y I S
Sbjct: 260 FDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPT---VHAYTIPIVS 316
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L +GR+ E +K MK++G + Y +LI + + +VA ++ + G++
Sbjct: 317 LCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPT 376
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ EG E A+ ++E
Sbjct: 377 AVTYSALINQLYVEGRFE-----------------------------------TALTIFE 401
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++S +P TY II +C IG KA +F +M + G V+ Y+ ++ +Y K G
Sbjct: 402 WMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQG 461
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYT 293
+ +AMRL+ MK G + + W Y +L+ R L + Y
Sbjct: 462 YMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYN 521
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+I+ Y + D + + + +G V +M+ FSK ++I E
Sbjct: 522 AIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISE 570
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 13/266 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYK---IGDSEKVAALFLECESRKLDLTPSSTHMY 63
L + KM +G V SG Y ++ F K I ++E + K L P+ Y
Sbjct: 537 LALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMV-----KQGLLPNVI-TY 590
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
D L K+GR K F +MK++ + Y+SLI + + AE L + E
Sbjct: 591 TSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCE 650
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+++ + LV +G + ++VESMK L S+ I ++ G K +
Sbjct: 651 P----NVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVES 706
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+K+++ +++ G P Y ++I A C+ KA+ +F M +K ++ V ++ ++
Sbjct: 707 ALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLD 766
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPN 269
K G ++ L+ M+ + C N
Sbjct: 767 GLLKEGETDLSLELLHVMESRNCTLN 792
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ G K A +++++++ GC P VTY+++IN C G +A + EM KG
Sbjct: 243 LIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKG 302
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ V AY+ + GR +A++L+ KMK +GC PNV Y +L+
Sbjct: 303 IEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALI 349
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 115/278 (41%), Gaps = 8/278 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E MK G+ LD+ Y ++ F + G E +LF E ++P+ Y + +
Sbjct: 471 EMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEH--GISPNVV-TYNAIINGY 527
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ + L F M E G + Y +I F+ + AE + ++G+L ++
Sbjct: 528 LTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNV 587
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ + + G ++ MK + + C +++G + + E+
Sbjct: 588 ITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQE----GQAEDAER 643
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L+ GC P TY +++ C G +A+++ M++KG Y +++ K
Sbjct: 644 LLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLE 703
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ A+++ M G +P + Y +L+ +A N RQ
Sbjct: 704 VESALKIFDSMVTTGFQPCLSDYKALICALCKA-NFRQ 740
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 87/216 (40%), Gaps = 4/216 (1%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
M KILC+ G+ E + G D Y SLI + +A E+F
Sbjct: 208 MIKILCNK----GKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRM 263
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G + + L+ EG +E+ ++++E M + + + + +
Sbjct: 264 VKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRS 323
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AVK+ ++ +GC P TY ++I+ R G + A V+ +M G V YS++
Sbjct: 324 CEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSAL 383
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ GR A+ + M PN YN ++
Sbjct: 384 INQLYVEGRFETALTIFEWMLSHDSLPNTETYNVII 419
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 110/270 (40%), Gaps = 9/270 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCD 68
+ +M GI + Y I+ + + + ALF + ES + PSS Y ++
Sbjct: 505 FNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNV---PSSG-TYNMMIS 560
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K+ R E F M ++G+L + Y S I +A ++F E +++
Sbjct: 561 GFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFP 620
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+L + L+ +EG E +++ E N+ + +V G + + A ++
Sbjct: 621 NLCTYSSLIDGLCQEGQAEDAERLLDD--GCEPNVDTYTT--LVRGLCGKGRCYEADQLV 676
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E + +G P + Y +++ C+ A K+F M GF C+ Y +++ K
Sbjct: 677 ESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKA 736
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ A + M K + ++ L+D
Sbjct: 737 NFRQKAQCMFQTMLKKHWNSDEVVWTVLLD 766
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
VY ++++ G P T+ ++I C G +AE + + G Y+S++ +
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G + A + +M GC+PN Y++L++
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALIN 280
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 147/326 (45%), Gaps = 35/326 (10%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE- 78
LD ++ A+ + G ++ +F + + LD T + Y ++ D GK GRA+
Sbjct: 235 LDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVT---YNVMLDVYGKMGRAWSM 291
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
IL+ +M+ KG+ D ++I + + A F + + G + ++
Sbjct: 292 ILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQ 351
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
++ + G+ + L +++ M++ +V + + + V + + S+G +P
Sbjct: 352 VFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMP 411
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
+TY ++INAY + G KA +VF +M++ G V Y++++ + GK R D ++++
Sbjct: 412 NAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKIL 471
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGR-------AKNLRQL---------EKYTTVISAYN-- 300
MK GC P+ +N+++ + G ++ LR++ E + T+ISAY
Sbjct: 472 CDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRC 531
Query: 301 -------------MAREFDMCVKFYN 313
+A F C+ YN
Sbjct: 532 GSEVDVAKMYGEMVAAGFTPCITTYN 557
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 156/388 (40%), Gaps = 56/388 (14%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++M+S G+ D ++ A + G ++ F + KL+ T Y +
Sbjct: 293 LELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFF---DDLKLNGYKPGTATYNSM 349
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
GK+G E L ++M++ D Y L+ ++ + KG+
Sbjct: 350 LQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGV 409
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC-------------------- 166
+ + + ++ Y + G +K LEV MK + C
Sbjct: 410 MPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIK 469
Query: 167 ISCVI-VNGFSKRRAYWAAV------KVYEQLISQ--------GCIPGQVTYASIINAYC 211
I C + +NG R W + K ++ +SQ G P + T+ ++I+AY
Sbjct: 470 ILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYG 529
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
R G K++ EM GF C+ Y++++ + G + A +V M+ KG +PN
Sbjct: 530 RCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNET 589
Query: 272 IYNSLMDMHGRAKNLRQLEKY-----------------TTVISAYNMAREFDMCVKFYNE 314
Y+ L+ + +A N+R LEK T V++ Y R+ + +++
Sbjct: 590 SYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYK-CRQLKGMERAFHQ 648
Query: 315 FRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ NG +D + M+ +F + ++E+
Sbjct: 649 LQNNGYKLDMVVINSMLSMFVRNQKLEK 676
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 134/293 (45%), Gaps = 3/293 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M +AG Y ++ A + G+ + ++ L+ RK P+ T Y +L
Sbjct: 541 YGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDM--RKKGFKPNETS-YSLLLHC 597
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+G + K ++ + + + +L+ + ++K E F + + G D
Sbjct: 598 YSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLD 657
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ V ++ M++ +EK E+++ + + L + +++ +++ W A ++ +
Sbjct: 658 MVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLK 717
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + G P V+Y ++I +C+ GL +A ++ EM G C + +++ ++ Y G
Sbjct: 718 DIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNG 777
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+A ++ M GC PN Y ++D + +AK ++ + + I +++
Sbjct: 778 LFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKEIDIS 830
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 137/318 (43%), Gaps = 42/318 (13%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M S G++ ++ Y ++ A+ K GD++K +F + ++L P+ +L L
Sbjct: 402 DTMASKGVMPNAITYTTVINAYGKAGDADKALEVF--GQMKELGCVPNVCTYNNVLV-LL 458
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK R+ +++K DMK G D + +++ + K ++ +E + G D
Sbjct: 459 GKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDK 518
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC--VIVNGFSKRRAYWAAVKVY 188
E F L+ Y G ++ M A + CI+ ++N ++R + AA V
Sbjct: 519 ETFNTLISAYGRCGSEVDVAKMYGEMVAA--GFTPCITTYNALLNALARRGNWKAAESVV 576
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV-------------------------- 222
+ +G P + +Y+ +++ Y + G EKV
Sbjct: 577 LDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKC 636
Query: 223 ---------FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
F ++Q G+ +V +SM++M+ + ++ A ++ + G +PN+ Y
Sbjct: 637 RQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTY 696
Query: 274 NSLMDMHGRAKNLRQLEK 291
NSL+D++ R + + E+
Sbjct: 697 NSLIDLYARVGDCWKAEE 714
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 120/252 (47%), Gaps = 17/252 (6%)
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ +A +LF + D++ ++ Y G ++ +E+ E MK L+ +
Sbjct: 216 SQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTY 275
Query: 169 CVIVNGFSKRRAYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
V+++ + K W+ + ++ +++ S+G + T ++I+A R G+ +A + F +++
Sbjct: 276 NVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLK 335
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK--- 284
G+ Y+SM+ ++GK G +A+ ++ +M+ CEP+ YN L+ + RA
Sbjct: 336 LNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHD 395
Query: 285 -------------NLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
+ YTTVI+AY A + D ++ + + + G V + ++
Sbjct: 396 EGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVL 455
Query: 332 GVFSKLSQIEEL 343
+ K S+ E++
Sbjct: 456 VLLGKRSRSEDM 467
>gi|295831085|gb|ADG39211.1| AT5G42310-like protein [Neslia paniculata]
Length = 185
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 94/167 (56%)
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ KE E + + VF +L+ Y + G +KT +V++ MK+ + V+++ F
Sbjct: 7 VLKEMEASDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 66
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A+ +++++S+G P +VT+ ++I+ +C+ G + AE++F M+++G C
Sbjct: 67 KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCAT 126
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y+ M+ YG R D RL+ KM +G PNV + +L+D++G++
Sbjct: 127 TYNIMINSYGDQERWDDMKRLLGKMNSQGILPNVVTHTTLVDVYGKS 173
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 140/315 (44%), Gaps = 5/315 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M S+G Y ++ + GD ++ + K P+ Y +L
Sbjct: 484 YDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIV--SKMLKNGFKPND-QSYSLLLQC 540
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G A I +++ I + +L+ + ++ E+ F+E + +G D
Sbjct: 541 YAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPD 600
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L +F ++ MY + G+ K E+ +S+K + L+ +++ ++K W A K+ +
Sbjct: 601 LVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILK 660
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
QL S P V+Y ++IN +C+ GL +A+++ EM G CVV Y ++V Y
Sbjct: 661 QLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLE 720
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
+A +V M +P Y ++D + +AK + ++ + IS + + FD +
Sbjct: 721 MFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEIS--DTDQNFDQKL 778
Query: 310 KFYNEFRMNGGVIDR 324
+ E R+ R
Sbjct: 779 QHMLEARIKDAQFGR 793
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 142/322 (44%), Gaps = 20/322 (6%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
G LD Y ++ A + G E+ LF E R+ + P+ Y ++ D G+ G
Sbjct: 173 PPGSRLDVRAYTTVLHALSRAGRYERALQLFAEL--RRQGVVPTIV-TYNVVLDVYGRMG 229
Query: 75 RAFE-ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
R++ I+ +M+ G+ D +++I + + A F++ + +G + + +
Sbjct: 230 RSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTY 289
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ ++ + G + L V++ M+++ + +++ + A K + + S
Sbjct: 290 NALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTS 349
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G +P TY +++ AY +G +A +F M++ G+ V Y+ + M GK R
Sbjct: 350 KGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTA 409
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGR-------AKNLRQL---------EKYTTVIS 297
+ ++ +M GC PN +N+++ + G+ + L + + Y T+IS
Sbjct: 410 MLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLIS 469
Query: 298 AYNMAREFDMCVKFYNEFRMNG 319
AY K Y+E +G
Sbjct: 470 AYGRCGSRTYAFKMYDEMISSG 491
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 105/229 (45%), Gaps = 17/229 (7%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA-VKV 187
D+ + ++ G E+ L++ ++ + + V+++ + + W V +
Sbjct: 179 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVAL 238
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
E++ + G P T +++I A R GL +A F +++ +G CVV Y++++ ++GK
Sbjct: 239 LEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGK 298
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
G +A+R++ +M+ GC+P+ YN L + RA + K
Sbjct: 299 AGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFT 358
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y TV++AY D + ++ + NG V + ++ G+ K S+
Sbjct: 359 YNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRF 407
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 130/319 (40%), Gaps = 40/319 (12%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L ++M+ +G D+ Y ++ + + G E+ A S+ L +T
Sbjct: 301 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGL---LPNTF 357
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + + GR E L F MK+ G + + + Y + + E+ +E
Sbjct: 358 TYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEM 417
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G + + ++ + + GM + V+ MK+ + +S +++ + + +
Sbjct: 418 SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR 477
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K+Y+++IS G P TY +++N R G +S A+ + +M + GF +YS +
Sbjct: 478 TYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLL 537
Query: 242 VAMYGKTG-----------------------------------RIRDAMRLVAKMKPKGC 266
+ Y K G R+ + ++K +G
Sbjct: 538 LQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGY 597
Query: 267 EPNVWIYNSLMDMHGRAKN 285
+P++ I+NS++ M+ AKN
Sbjct: 598 KPDLVIFNSMLAMY--AKN 614
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ IL +L + G+ E + R MKEKG+ D Y LI F + +A E +
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMI 375
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G L D+ + ++ G ++ LEV E + + + + +
Sbjct: 376 SDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRY 435
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+++ +L++QG P ++TY S+I+ CR G+ +A ++ ++MQ + VV+Y+ ++
Sbjct: 436 RALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIIL 495
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
K R DA+ ++A M KGC+PN Y
Sbjct: 496 LGLCKVNRANDAIEVLAAMTEKGCQPNETTY 526
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
MK +G L D Y +I SF S ++ +A E+F+E + + + L+ I +G
Sbjct: 164 MKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGG 223
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
++ +++++ M + L I+ G K A ++ L S+GC P +TY
Sbjct: 224 IDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNI 283
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
++ G +S+ EK+ EM G VV +S ++ + G++ +A+ L+ MK KG
Sbjct: 284 LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343
Query: 266 CEPNVWIYNSLM 277
+P+ + Y+ L+
Sbjct: 344 LKPDAYCYDPLI 355
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 3/203 (1%)
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+AFE+L R + +G D Y L+ + S + E+L E G ++
Sbjct: 261 KAFELL---RSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHS 317
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ +G VE+ + ++ SMK L ++ GF + A + E +IS
Sbjct: 318 ILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISD 377
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
GC+P V Y +I+ CR G +A +VF ++ + G V +Y+++ + +G A
Sbjct: 378 GCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRA 437
Query: 255 MRLVAKMKPKGCEPNVWIYNSLM 277
+ ++ K+ +G +P+ YNSL+
Sbjct: 438 LEMILKLLNQGIDPDEITYNSLI 460
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ ++ MK G+ D+ CY ++ F + G + +A FLE D Y
Sbjct: 330 EEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLD-LATEFLEYMIS--DGCLPDIVNY 386
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ L ++G+A + L+ F + E G + S Y +L + S + A E+ +
Sbjct: 387 NTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLN 446
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ D + L+ +GMV++ +E++ M++ + +I+ G K
Sbjct: 447 QGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRAND 506
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
A++V + +GC P + TY +I GL ++A
Sbjct: 507 AIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEA 542
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Query: 164 SDCISCV-IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
D I C ++ GF R A +V E L G P Y ++I+ + + A +V
Sbjct: 102 PDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQLENANRV 160
Query: 223 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
M+ +GF VV Y+ M+ + G++ A+ + ++ CEP V Y L++
Sbjct: 161 LDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIE 216
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 3/270 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+Y ++ AG L+ + +M F K G+ +F E R L T S + L +
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVS---FNTLIN 283
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G + M++ D Y++LI + ++ A LF E E+G++
Sbjct: 284 GYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIP 343
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ +F L+ + G ++ E + M + L + +VNGF K AA +
Sbjct: 344 NDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ +I +G P +VTY ++I+ +CR G A ++ EM Q G + V +S+++ K
Sbjct: 404 DGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKE 463
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GR+ DA R + +M G +P+ Y +MD
Sbjct: 464 GRVIDAERALREMLRAGMKPDDVTYTMMMD 493
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 121/279 (43%), Gaps = 8/279 (2%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKIL 66
H+ EK ++ V Y ++ A K + LF E CE L P+ ++ L
Sbjct: 299 HHMEKSRTRPDVF---TYSALINALCKENKMDGAHRLFYEMCER---GLIPNDV-IFTTL 351
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
++G+ + + ++ M KG+ D +Y +L+ F ++ A + +G+
Sbjct: 352 IHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ + G V+ LE+ + M + + ++ G K A +
Sbjct: 412 RPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAER 471
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ G P VTY +++A+C+ G K+ EMQ G VV Y+ ++
Sbjct: 472 ALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLC 531
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
K G++++A L+ M G P+ YN+L++ H R N
Sbjct: 532 KLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHAN 570
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 94/213 (44%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L D + K + F+ ++ + G + V+ L+ F + A+++F E ++
Sbjct: 211 LLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRS 270
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ + F L+ Y + G ++ + M+ + ++N K A
Sbjct: 271 LRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+++ ++ +G IP V + ++I+ + R G ++ + +M KG +V Y+++V +
Sbjct: 331 RLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G + A +V M +G P+ Y +L+D
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKVTYTTLID 423
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 16/224 (7%)
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ E + G ++ VF L+ + +EG + +V + + L + ++NG+
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYC 286
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K ++ + P TY+++INA C+ A ++F EM ++G V
Sbjct: 287 KVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDV 346
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR------AKNL---- 286
+++++ + + G+I KM KG +P++ +YN+L++ + A+N+
Sbjct: 347 IFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 287 --RQLEK----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
R L YTT+I + + D ++ E NG +DR
Sbjct: 407 IRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDR 450
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 108/234 (46%), Gaps = 8/234 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+KM S G+ D Y ++ F K GD VAA + + L P Y L D
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGD--LVAARNIVDGMIRRGLRPDKV-TYTTLIDG 424
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G L+ ++M + GI D +++LIC V AE +E GM D
Sbjct: 425 FCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPD 484
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY 188
+ ++ + ++G + ++++ M+ ++ +I + ++ V++NG K A +
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQ-SDGHIPNVVTYNVLLNGLCKLGQMKNADMLL 543
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ +++ G +P +TY +++ + R ++ A K + + + G + +Y S+V
Sbjct: 544 DAMLNVGVVPDDITYNTLLEGHHR---HANASKHYKQKPEIGIVADLASYKSLV 594
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 127/266 (47%), Gaps = 3/266 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KMK GI + Y ++ F KI D+E F E + R L + +Y + +
Sbjct: 328 KMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTL---NAIIYGNIIYAHC 384
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
++ + R+M+E+GI +Y +++ + I + +F +E G +
Sbjct: 385 QACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVI 444
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ +YI+ G V K LEV + M+ A + + +++NGF + + + A V+E +
Sbjct: 445 SYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV 504
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ G P V Y +II A+C +G +A + EMQ++ + ++ + ++G +
Sbjct: 505 VKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDM 564
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
R A+ + M+ GC P V +N+L+
Sbjct: 565 RRALEIFDMMRWSGCIPTVHTFNALI 590
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 119/253 (47%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ I+ F + GD + +F + + + H + L L + + + ++
Sbjct: 551 FMPIIHGFARSGDMRRALEIF---DMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILD 607
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M GI + Y +++ +AS+ + A E F + + +G+ D+ + L+ + G
Sbjct: 608 EMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSG 667
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ L V M + ++ + + ++++G+++R W A ++ +Q+ +G P TY
Sbjct: 668 RMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYT 727
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S INA C+ G +A K EM+ G + Y++++ + + A++ +MK
Sbjct: 728 SFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSA 787
Query: 265 GCEPNVWIYNSLM 277
G +P+ +Y+ LM
Sbjct: 788 GLKPDKAVYHCLM 800
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 158/350 (45%), Gaps = 26/350 (7%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS---THMYKILCDS 69
M+ AGI + Y ++ F ++ D A+F + K L P ++ + C
Sbjct: 469 MEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV--VKDGLKPDVVLYNNIIRAFC-G 525
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+G RA +K +M+++ + +I FA +++ A E+F G +
Sbjct: 526 MGNMDRAIRTVK---EMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPT 582
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+L +E+ +EK +E+++ M A ++ ++ I++G++ A + +
Sbjct: 583 VHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFT 642
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L ++G TY +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 643 KLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRG 702
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLE---------KYT 293
+ +A L+ +MK +G +P++ Y S + DM K ++++E YT
Sbjct: 703 DVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYT 762
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAG-IMVGVFSKLSQIEE 342
T+I + A + +K + E + G D+A+ +M + S+ S EE
Sbjct: 763 TLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEE 812
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 28 IMEAFY-KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDM 86
+M +Y + GD F +R ++ T +H+Y L + E L R M
Sbjct: 273 LMVTYYARRGDMHHARGTFESMRARGIEPT---SHVYTSLIHAYAVGRDMEEALSCVRKM 329
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
KE+GI Y+ L+ FA IA+ + A+ FKEA+E+ + ++ ++ + + +
Sbjct: 330 KEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNM 389
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
+ +V M+ ++ I +++G++ + V+++L G P ++Y +
Sbjct: 390 TQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCL 449
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
IN Y +IG SKA +V M+ G + YS ++ + + +A + + G
Sbjct: 450 INLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGL 509
Query: 267 EPNVWIYNSLM 277
+P+V +YN+++
Sbjct: 510 KPDVVLYNNII 520
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 84/183 (45%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ ++ +A ++ A F+ +G+ V+ L+ Y +E+ L V MK
Sbjct: 271 FGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMK 330
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ +S ++V GF+K AA +++ + + Y +II A+C+ +
Sbjct: 331 EEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMT 390
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+AE + EM+++G D + Y +M+ Y G + + ++K G P+V Y L+
Sbjct: 391 QAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLI 450
Query: 278 DMH 280
+++
Sbjct: 451 NLY 453
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M G+ + Y I+ GD EK + E K ++P+ Y L D+
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKME--KEGISPNVV-TYNTLIDA 251
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K + E + R M G+ + Y S+I + EL +E KG++ D
Sbjct: 252 SCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPD 311
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ LV + +EG + + L ++ M L+ + ++N K AV++++
Sbjct: 312 EVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFD 371
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+ +G P + TY ++I+ +C+ GL ++A KV EM GF VV Y+++V Y G
Sbjct: 372 QMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLG 431
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R+++A+ ++ M +G P+V Y++++
Sbjct: 432 RVQEAVGILRGMVERGLPPDVVSYSTVI 459
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 158/348 (45%), Gaps = 23/348 (6%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM--YK 64
L + KM+ GI + Y +++A K ++ AL R + + + ++ Y
Sbjct: 227 LGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALL-----RAMAVGGVAANLISYN 281
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ + L GR E+ + +M+ KG++ D Y +L+ F + L E K
Sbjct: 282 SVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGK 341
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ ++ + L+ + G + + +E+ + M+ L ++ +++GF ++ A
Sbjct: 342 GLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEA 401
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
KV ++I G P VTY ++++ YC +G +A + M ++G VV+YS+++A
Sbjct: 402 YKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAG 461
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK------ 291
+ + + A ++ +M KG P+ Y+SL+ + L R++ +
Sbjct: 462 FCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPD 521
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
YT++I+AY + E ++ ++E G + D +++ +K
Sbjct: 522 EVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNK 569
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 130/304 (42%), Gaps = 40/304 (13%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M+ G+V D Y ++ F K G+ + L L E L+P+ Y L + +
Sbjct: 301 EEMRGKGLVPDEVTYNTLVNGFCKEGNLHQ--GLVLLSEMVGKGLSPNVV-TYTTLINCM 357
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+G ++ F M+ +G+ + Y +LI F + A ++ E G +
Sbjct: 358 CKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSV 417
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
+ LV Y G V++ + ++ M L D +S ++ GF + R A ++ E
Sbjct: 418 VTYNALVHGYCFLGRVQEAVGILRGMVERGLP-PDVVSYSTVIAGFCRERELGKAFQMKE 476
Query: 190 QLISQGCIPG-----------------------------------QVTYASIINAYCRIG 214
+++ +G +P +VTY S+INAYC G
Sbjct: 477 EMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDG 536
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
SKA ++ EM Q+GF V YS ++ K R + A RL+ K+ + P+ YN
Sbjct: 537 ELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYN 596
Query: 275 SLMD 278
+L++
Sbjct: 597 TLIE 600
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+AF++ + +M EKG+L D Y+SLI ++ A +LF+E +G+ D +
Sbjct: 469 GKAFQMKE---EMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTY 525
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ Y +G + K L + + M + V++NG +K+ A ++ +L
Sbjct: 526 TSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFY 585
Query: 194 QGCIPGQVTYASII---------------NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ +P VTY ++I +C GL ++A++VF M Q+ Y
Sbjct: 586 EESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIY 645
Query: 239 SSMVAMYGKTGRIRDAMRL 257
+ M+ + + G + A L
Sbjct: 646 NLMIHGHSRGGNVHKAYNL 664
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 86/175 (49%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
AE +F++ G+ ++ + ++ + +G +EK L + M+ ++ + +++
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
K++ A+ + + G ++Y S+IN C G S+ ++ EM+ KG
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP 310
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
V Y+++V + K G + + L+++M KG PNV Y +L++ +A NL +
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSR 365
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
VI+ G + + ++ +G P VTY ++I+A C+ +A + M
Sbjct: 212 VIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVG 271
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ- 288
G +++Y+S++ GR+ + LV +M+ KG P+ YN+L++ + NL Q
Sbjct: 272 GVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQG 331
Query: 289 ---------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ YTT+I+ A V+ +++ R+ G
Sbjct: 332 LVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
S R Y A +V+ ++ G P TY II G K +M+++G V
Sbjct: 183 SNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNV 242
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y++++ K ++++AM L+ M G N+ YNS+++
Sbjct: 243 VTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVIN 285
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 164 SDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL-----YSK 218
S + ++V S+ A+ + G P ++Y ++++A R Y
Sbjct: 131 SSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDD 190
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
AE+VF +M + G V Y+ ++ G + + + KM+ +G PNV YN+L+D
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250
Query: 279 MHGRAKNLRQ 288
+ K +++
Sbjct: 251 ASCKKKKVKE 260
>gi|359490014|ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 134/313 (42%), Gaps = 22/313 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G DS Y +++ + G +K + E + L +Y + D+ G
Sbjct: 153 EMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSL---DKRIYNSIIDTFG 209
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G E L+ F M+E+G+ D + SLI +V A ELF + +E+G+ D +
Sbjct: 210 KCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPK 269
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+F+ ++ E+G + E+MK S I ++V+ + + + + L
Sbjct: 270 IFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISAL 329
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S+G P + + NAY + GL + KV M+ +G + ++ + ++ +G GR
Sbjct: 330 KSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRH 389
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
+A+ + +K G P+V Y++LM A AR+FD +
Sbjct: 390 LEALSVYHHIKDTGISPDVVTYSTLM-------------------KACIRARKFDKVPEI 430
Query: 312 YNEFRMNGGVIDR 324
Y E G DR
Sbjct: 431 YEEMESAGCTPDR 443
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 141/308 (45%), Gaps = 3/308 (0%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M++ G L G Y ++EA +G + + A+F E L L +Y ++ S
Sbjct: 48 QMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKL---DLRVYNVMLRSCL 104
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G K +M GI + + Y +L+ + + + E G D
Sbjct: 105 RKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGPDSF 164
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
V+ K++ +Y + GM +K +E+V ++ +++ I I++ F K A++V+E++
Sbjct: 165 VYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKM 224
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+G P +T+ S+I +C+ G KA ++F +MQ++G + ++++ G+ G+
Sbjct: 225 QEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQGKW 284
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
R MK +G + + IY L+D++G+ + E+ + + + + M
Sbjct: 285 DVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVL 344
Query: 312 YNEFRMNG 319
N + G
Sbjct: 345 ANAYAQQG 352
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 105/224 (46%), Gaps = 3/224 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +EKM+ G+ D + +++ K GD K LF + + L P ++ +
Sbjct: 218 LEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPK---IFITI 274
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
LG+ G+ I + F +MK +G ++YA L+ + + EE + +G+
Sbjct: 275 ISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGI 334
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+F L Y ++G+ E+T++V++ M+ + + + +++N F + A+
Sbjct: 335 QPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALS 394
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
VY + G P VTY++++ A R + K +++ EM+ G
Sbjct: 395 VYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAG 438
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G + +K M+ G Y ++I + S+ AE +F+E G+ DL
Sbjct: 35 RVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLR 94
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
V+ ++ + +G++E +V+ M D + G + RA
Sbjct: 95 VYNVMLRSCLRKGLLELADKVLAEM--------DAL------GIGRNRA----------- 129
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
TY ++++ Y R G + V EM + GF YS ++ +Y G
Sbjct: 130 ----------TYEALVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMW 179
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ AM +V +++ G + IYNS++D G+ L +
Sbjct: 180 KKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSE 216
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 16/175 (9%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+K+ Q+ + G +Y ++I A +G +AE +F EM G + Y+ M+
Sbjct: 42 AMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLRVYNVMLR 101
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
+ G + A +++A+M G N Y +L+D +GRA L +
Sbjct: 102 SCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGP 161
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ VI Y + ++ E R G +D+ + ++ F K ++ E
Sbjct: 162 DSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSE 216
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
V Y + I CR+G KA K+ +M+ GF + +Y++++ G GR +A + +
Sbjct: 24 VVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFRE 83
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE---FDMCVKFYN 313
M G + ++ +YN ++ R L +K + A + R ++ V +Y
Sbjct: 84 MVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYG 139
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 7/272 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L E+M + GI D+ Y ++ + E+ LF + ++++ + Y L
Sbjct: 29 LATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN---PNVVTYNTL 85
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L K+ R + F++M KG + Y +LI F ++ A+++F +
Sbjct: 86 INGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNC 145
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAA 184
+ ++ + L+ + G V+ EV++ M K N++ SC+I +GF K R A
Sbjct: 146 VPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA-TYSCLI-DGFCKVRRVDEA 203
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
K+ EQ+++QG P VTY ++N+ CR A K+F M Q+ VV Y++++
Sbjct: 204 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 263
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
++ A RL A+M KGC P+ Y++L
Sbjct: 264 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 295
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 128/302 (42%), Gaps = 16/302 (5%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y + + L K+ R + L +M +GI D +Y ++ +V+ A
Sbjct: 6 PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF++ ++ + ++ + L+ + +E E+ + M ++ +++GF
Sbjct: 66 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K++ AA V+++++ C+P VTY ++I+ + G A +V M +KG V
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
YS ++ + K R+ +A +L+ +M +G P V YN L++ RA L K
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y T++ A ++ D + Y E G D + ++ ++
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKV 305
Query: 341 EE 342
E
Sbjct: 306 HE 307
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 3/159 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q+ + M G+ + Y +++ F K+ ++ L + ++ + T + Y
Sbjct: 166 QAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVT---Y 222
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL +SL ++ + + K FR M ++ Y +L+ + ++ A L+ E
Sbjct: 223 NILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIA 282
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN 162
KG D + L G V + E++E MK + N
Sbjct: 283 KGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRN 321
>gi|302781572|ref|XP_002972560.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
gi|300160027|gb|EFJ26646.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
Length = 341
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 7/272 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y I+ + + G++ + AL E K P++ +Y I+ L K G+ E L
Sbjct: 7 YSTIVRGYCEDGETRQALALL---EHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLH 63
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M D Y LI + + ++ A+ L + + + D+ + L+ +G
Sbjct: 64 SMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKG 123
Query: 145 ----MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
VE+ + E M + + V+++ + + A KV + + GC
Sbjct: 124 NGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDL 183
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY +IN + + G+ KA +F+EM +G VV Y+S+V + K G++ +A +L A+
Sbjct: 184 VTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAE 243
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
MK +G PN Y S+ D +A ++ Y
Sbjct: 244 MKARGIFPNGRTYTSITDACLKAGRMQDAHAY 275
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 118/267 (44%), Gaps = 7/267 (2%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
++ L E MK+A + ++ Y I+ K G ++ L S +
Sbjct: 20 TRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLL---HSMATTSCAPDIYT 76
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE----VKVAEELF 118
Y IL ++L K GR + M+ + D Y +LI V+ A LF
Sbjct: 77 YNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGNGRFRVERAFRLF 136
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E +KG + ++ + M E+ +V++ M +++N F+K
Sbjct: 137 EEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKA 196
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A+ ++ ++ ++GCIP VTY S+++ +C+ G +A K+F EM+ +G Y
Sbjct: 197 GMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGRTY 256
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+S+ K GR++DA + +M+ +G
Sbjct: 257 TSITDACLKAGRMQDAHAYLVEMRKEG 283
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 123/288 (42%), Gaps = 18/288 (6%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L M + D Y ++ A K+G E L ++R P+ Y L
Sbjct: 59 LDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARD---CPTDIVTYNTL 115
Query: 67 CDSLGKSG----RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
L + G R + F +M +KG Y +I + + + A+++
Sbjct: 116 IHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMH 175
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI-----VNGFSK 177
E G DL + L+ + + GM++K +++ E+ CI V+ V+GF K
Sbjct: 176 ENGCAFDLVTYNMLINRFAKAGMMDKAMDLF-----VEMPTRGCIPDVVTYNSVVDGFCK 230
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A K++ ++ ++G P TY SI +A + G A +EM+++G ++
Sbjct: 231 AGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVD-AIS 289
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
Y ++++ K G+ + +L+ +M KG +PN+ +N + + + N
Sbjct: 290 YVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESN 337
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY++I+ YC G +A + M+ Y+ ++ K G+ ++A+ L+ M
Sbjct: 6 TYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLHSM 65
Query: 262 KPKGCEPNVWIYNSLMD 278
C P+++ YN L++
Sbjct: 66 ATTSCAPDIYTYNILIN 82
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 1/279 (0%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M+ I D + ++ A K G AL L E R+ L P + Y L +
Sbjct: 245 DAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAI-TYNTLISAC 303
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ + + F +M D Y +++ + + AE +FKE EKG D
Sbjct: 304 SQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDA 363
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + +EG VE+ V E + A +++ + K A+ +Y++
Sbjct: 364 VTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDE 423
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + GC P VTY ++++ ++ S+A KV EM G +V +S+++ Y K+GR
Sbjct: 424 MRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGR 483
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
DA R +M G +P+ Y ++D+ R+ R+L
Sbjct: 484 QDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKL 522
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 17/287 (5%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E + LD+ S + + ++ ++ K+G FE++K + MK G L + +Y +I
Sbjct: 842 ELQDLDIKISKSTVL-LMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHN 900
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ E + E E G DL V L+LMY G ++T+EV S+ A L +
Sbjct: 901 KRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTY 960
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
++ +S+ + ++ +G P +Y ++ A + L+ +A+ +F EM+
Sbjct: 961 NTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRT 1020
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
KG+ Y M+ +Y A L++ MK G EP + + LM +G + + +
Sbjct: 1021 KGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDE 1080
Query: 289 LEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
EK Y+TV+ AY R++ + + E + +G
Sbjct: 1081 AEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDG 1127
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 124/274 (45%), Gaps = 9/274 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE---CESRKLDLTPSSTHMY 63
L +++ AG+ D+ Y ++ A + + + A+F E E R DL Y
Sbjct: 278 LELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRP-DL-----WTY 331
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ G+ G+A E F+++ EKG D Y SL+ +FA +V+ E + +E +
Sbjct: 332 NAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVK 391
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G +D + ++ MY + G ++ L + + M+ V+V+ K
Sbjct: 392 AGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISE 451
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A KV E++ G P VT++++I AY + G AE+ F M + G +AY M+
Sbjct: 452 AGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLD 511
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ ++ R M L M G +P+ +Y L+
Sbjct: 512 VFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLL 545
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 135/304 (44%), Gaps = 18/304 (5%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA--EVKVAE 115
++ ++ + +SGR + + M+++ I D + +LI + A VA
Sbjct: 219 ATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 278
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
EL E + G+ D + L+ + ++ + V E M +E +V+
Sbjct: 279 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 338
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+ A ++++L+ +G P VTY S++ A+ + G + E+V E+ + GF K
Sbjct: 339 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 398
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ------- 288
+ Y++M+ MYGK GR+ A+ L +M+ GC P+ Y L+D G+ + +
Sbjct: 399 ITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEE 458
Query: 289 ---------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
L ++ +I AY + D + ++ +G DR +M+ VF++ +
Sbjct: 459 MADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDE 518
Query: 340 IEEL 343
+L
Sbjct: 519 TRKL 522
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 123/266 (46%), Gaps = 22/266 (8%)
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
+E G+ D ++ +LI ++A + A +F +KG L +E ++ I +G +
Sbjct: 776 QESGV--DRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRL 833
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
++ VV+ +++ ++ IS +++ F+K + +K+Y + + G +P Y +
Sbjct: 834 DELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIM 893
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+ C + E + EM+ GF +V ++++ MY TG + + + G
Sbjct: 894 ISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGL 953
Query: 267 EPNVWIYNSLMDMHGRAKNLR------------------QLEKYTTVISAYNMAREFDMC 308
EP+ YN+L+ M+ R N R +LE Y +++A A+ ++
Sbjct: 954 EPDEDTYNTLIVMYSR--NFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQA 1011
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVF 334
+ E R G ++R++ +M+ ++
Sbjct: 1012 DLLFEEMRTKGYRLNRSIYHMMMKIY 1037
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 3/231 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + Y + AG+ D Y ++ + + E+ L E R L TP
Sbjct: 937 NFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGL--TPK-LE 993
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
YKIL + GK+ + F +M+ KG + S+Y ++ + + AE L
Sbjct: 994 SYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAM 1053
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+E G+ + L+ Y G ++ +V+ S+K++ L IS +++ + + R Y
Sbjct: 1054 KEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDY 1113
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+ ++ G P + S I A A + +Q GFD
Sbjct: 1114 SLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFD 1164
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 123/303 (40%), Gaps = 49/303 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M +G+ D Y +++ F + ++ K+ L+ + D +Y++L +
Sbjct: 491 FDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLY---RAMIKDGYKPDDGLYQVLLAA 547
Query: 70 LGKSGRAFEILKFFRDMKEKGILE-DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K EI +DM+ + E +P V +S++ I++ L K A +G
Sbjct: 548 LAKGNEHDEIEGVIQDME--AVFEMNPLVISSILIKAECISQ---GASLLKRACLQGYEP 602
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIV----NG--------- 174
D + L ++ Y + G EK L ++E ++ N + IS C I+ NG
Sbjct: 603 DGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEY 662
Query: 175 ----FSKRRAYWAAVKVYEQLISQ--------------------GCIPGQVTYASIINAY 210
KR ++ +YE LI+ G +P Q + S I
Sbjct: 663 SRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKVFPSFIFQC 722
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVA-YSSMVAMYGKTGRIRDAMRLVAKMKPK-GCEP 268
CR+G A ++ + + +++ +M+ YGK + A V +K + G +
Sbjct: 723 CRLGFPETAYQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGVDR 782
Query: 269 NVW 271
+W
Sbjct: 783 RIW 785
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 11/252 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y++M++ G D+ Y ++++ K+ D A LE E L P+ ++
Sbjct: 418 LGLYDEMRAIGCTPDAVTYTVLVDSLGKM-DRISEAGKVLE-EMADAGLKPTLVTFSALI 475
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
C + KSGR + + F M E G+ D Y ++ FA E + L++ + G
Sbjct: 476 C-AYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGY 534
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLE-VVESMKNA-ELNISDCISCVIVNGFSKRRAYWAA 184
D ++ +++L + +G +E V++ M+ E+N VI + K
Sbjct: 535 KPDDGLY-QVLLAALAKGNEHDEIEGVIQDMEAVFEMN-----PLVISSILIKAECISQG 588
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ QG P + SI++AY ++G + K + ++Q + + + +
Sbjct: 589 ASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIML 648
Query: 245 YGKTGRIRDAMR 256
K G+I DA++
Sbjct: 649 LCKNGKIVDAIQ 660
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 140/315 (44%), Gaps = 5/315 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M S+G Y ++ + GD ++ + K P+ Y +L
Sbjct: 484 YDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIV--SKMLKNGFKPND-QSYSLLLQC 540
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G A I +++ I + +L+ + ++ E+ F+E + +G D
Sbjct: 541 YAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPD 600
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L +F ++ MY + G+ K E+ +S+K + L+ +++ ++K W A K+ +
Sbjct: 601 LVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILK 660
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
QL S P V+Y ++IN +C+ GL +A+++ EM G CVV Y ++V Y
Sbjct: 661 QLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLE 720
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
+A +V M +P Y ++D + +AK + ++ + IS + + FD +
Sbjct: 721 MFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEIS--DTDQNFDQKL 778
Query: 310 KFYNEFRMNGGVIDR 324
+ E R+ R
Sbjct: 779 QHMLEARIKDAQFGR 793
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 142/322 (44%), Gaps = 20/322 (6%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
G LD Y ++ A + G E+ LF E R+ + P+ Y ++ D G+ G
Sbjct: 173 PPGSRLDVRAYTTVLHALSRAGRYERALQLFAEL--RRQGVVPTIV-TYNVVLDVYGRMG 229
Query: 75 RAFE-ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
R++ I+ +M+ G+ D +++I + + A F++ + +G + + +
Sbjct: 230 RSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTY 289
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ ++ + G + L V++ M+++ + +++ + A K + + S
Sbjct: 290 NALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTS 349
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G +P TY +++ AY +G +A +F M++ G+ V Y+ + M GK R
Sbjct: 350 KGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTA 409
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGR-------AKNLRQL---------EKYTTVIS 297
+ ++ +M GC PN +N+++ + G+ + L + + Y T+IS
Sbjct: 410 MLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLIS 469
Query: 298 AYNMAREFDMCVKFYNEFRMNG 319
AY K Y+E +G
Sbjct: 470 AYGRCGSRTYAFKMYDEMISSG 491
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 105/229 (45%), Gaps = 17/229 (7%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA-VKV 187
D+ + ++ G E+ L++ ++ + + V+++ + + W V +
Sbjct: 179 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVAL 238
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
E++ + G P T +++I A R GL +A F +++ +G CVV Y++++ ++GK
Sbjct: 239 LEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGK 298
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
G +A+R++ +M+ GC+P+ YN L + RA + K
Sbjct: 299 AGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFT 358
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y TV++AY D + ++ + NG V + ++ G+ K S+
Sbjct: 359 YNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRF 407
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 130/319 (40%), Gaps = 40/319 (12%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L ++M+ +G D+ Y ++ + + G E+ A S+ L +T
Sbjct: 301 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGL---LPNTF 357
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + + GR E L F MK+ G + + + Y + + E+ +E
Sbjct: 358 TYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEM 417
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G + + ++ + + GM + V+ MK+ + +S +++ + + +
Sbjct: 418 SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR 477
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K+Y+++IS G P TY +++N R G +S A+ + +M + GF +YS +
Sbjct: 478 TYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLL 537
Query: 242 VAMYGKTG-----------------------------------RIRDAMRLVAKMKPKGC 266
+ Y K G R+ + ++K +G
Sbjct: 538 LQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGY 597
Query: 267 EPNVWIYNSLMDMHGRAKN 285
+P++ I+NS++ M+ AKN
Sbjct: 598 KPDLVIFNSMLAMY--AKN 614
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 1/239 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y + LG++ + I K M G Y LI S+ + A E+F +
Sbjct: 339 YTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQ 398
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
++ G D + L+ ++ + G + +E+ + M+ A L+ V++N K
Sbjct: 399 MQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGH 458
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AA K++ ++I QGC+P VTY +I + Y A K++ +MQ GF+ V YS
Sbjct: 459 LAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSI 518
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLEKYTTVISA 298
++ + G +G + +A + ++MK K P+ +Y L+D+ G+A N+ + E Y ++ A
Sbjct: 519 VMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHA 577
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 115/264 (43%), Gaps = 20/264 (7%)
Query: 80 LKFFRDMKE-KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
L FF +K+ G D Y +++ + +L + G + + +L+
Sbjct: 322 LGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIH 381
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
Y + +EV M+ A C +++ +K A+++Y+++ + G P
Sbjct: 382 SYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSP 441
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
TY+ +IN + G + A+K+F EM ++G +V Y+ M+A+ K ++A++L
Sbjct: 442 DTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLY 501
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMN 318
M+ G EP+ Y+ +M++ G + L + E ++E +
Sbjct: 502 RDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAE-------------------AIFSEMKRK 542
Query: 319 GGVIDRAMAGIMVGVFSKLSQIEE 342
V D + G++V ++ K +E+
Sbjct: 543 NWVPDEPVYGLLVDLWGKAGNVEK 566
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 7/201 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M++AG+ D+ Y ++ K G LF CE + P+ Y I+
Sbjct: 431 YQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLF--CEMIEQGCVPNLV-TYNIMIAL 487
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ LK +RDM+ G D Y+ ++ + AE +F E + K + D
Sbjct: 488 QAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPD 547
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCVIVNGFSKRRAYWAAVKV 187
V+ LV ++ + G VEK E ++M +A L N+ C S +++ F + A +
Sbjct: 548 EPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNS--LLSAFLRVNRLPDAYNL 605
Query: 188 YEQLISQGCIPGQVTYASIIN 208
+ +++ G P TY +++
Sbjct: 606 LQSMLNLGLNPSLQTYTLLLS 626
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 99/234 (42%), Gaps = 3/234 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ AG D YC +++ K G ++ ++ L T Y ++ +
Sbjct: 396 FNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLS---PDTFTYSVMINC 452
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LGK+G K F +M E+G + + Y +I A + A +L+++ + G D
Sbjct: 453 LGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPD 512
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + G +++ + MK + + ++V+ + K A + Y+
Sbjct: 513 KVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQ 572
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
++ G P T S+++A+ R+ A + M G + + Y+ +++
Sbjct: 573 AMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLS 626
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q+ L Y M++AG D Y +ME G ++ A+F E ++ + P
Sbjct: 493 NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIF--SEMKRKNWVPDEP- 549
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D GK+G + ++++ M G+ + SL+ +F + + A L +
Sbjct: 550 VYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSM 609
Query: 122 EEKGMLRDLEVFLKLV 137
G+ L+ + L+
Sbjct: 610 LNLGLNPSLQTYTLLL 625
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 129/270 (47%), Gaps = 19/270 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L +L R I ++E G+ D + ++I +F+ ++ A E F + +
Sbjct: 51 YTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQ 110
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC--VIVNGFSKRRA 180
E GM + L+ Y G E++++++E M + E N+ + V+V + ++
Sbjct: 111 ENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELM-SQEGNVKPNLRTYNVLVRAWCNKKR 169
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A V ++I+ G P VTY +I AY + G +AE V +EMQ G
Sbjct: 170 ITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGI 229
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL-------MDMHGRAKNLRQLEK-- 291
+++ Y K GRIR+A+R +MK G PN+ I+NSL MD G + L +E+
Sbjct: 230 IMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFG 289
Query: 292 -------YTTVISAYNMAREFDMCVKFYNE 314
++T+++A++ A + C + +++
Sbjct: 290 VKPDVITFSTIMNAWSTAGFMEKCREIFDD 319
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 3/231 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM ++GI D Y I A+ + G ++ + LE ++ + + I+
Sbjct: 179 KMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQ---PNERTCGIIMSGYC 235
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K GR E L+F MKE GI + ++ SLI F +I + +E+ EE G+ D+
Sbjct: 236 KEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVI 295
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F ++ + G +EK E+ + M A + ++ G+ + + A ++ +
Sbjct: 296 TFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTM 355
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
I G P V + ++I+ +C G A +VF +M Q+G + + +++
Sbjct: 356 IKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLI 406
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 95/232 (40%), Gaps = 17/232 (7%)
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
R + KL+ +E+G ++ + S+ S ++ + ++ + + +
Sbjct: 11 RTVRSRTKLMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSI 70
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
Q+ G P + + ++INA+ G A + F +MQ+ G Y++++ YG
Sbjct: 71 ISQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGI 130
Query: 248 TGRIRDAMRLVAKMKPKG-CEPNVWIYNSLMDMHGRAKNLRQ----------------LE 290
G+ ++++L+ M +G +PN+ YN L+ K + + +
Sbjct: 131 AGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVV 190
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y T+ +AY D E + NG + GI++ + K +I E
Sbjct: 191 TYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIRE 242
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 1/178 (0%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
AE +F E G L + L+ + + ++ ++ +N ++N
Sbjct: 32 AESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFNAVIN 91
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
FS+ +A++ + ++ G P TY ++I Y G ++ K+ M Q+G K
Sbjct: 92 AFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVK 151
Query: 234 C-VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ Y+ +V + RI +A +V KM G +P+V YN++ + + L Q E
Sbjct: 152 PNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAE 209
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 94/221 (42%), Gaps = 11/221 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYK 64
L + +MK GI + + +++ F I D + V + +E K D+ ST M
Sbjct: 244 LRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIM-- 301
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
++ +G + + F DM + GI D Y+ L + E + AEEL +
Sbjct: 302 ---NAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKS 358
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC--VIVNGFSKRRAYW 182
G ++ +F ++ + G ++ + V + M + IS + ++ GF++ R W
Sbjct: 359 GFQPNVVIFTTVISGWCSAGKMDYAVRVFDKM--CQRGISPNLKTFETLIWGFAEARQPW 416
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
A ++ + + P + T + A+ G+ +A ++
Sbjct: 417 KAEEILQIMTEFEVQPEKSTMLLVAEAWRATGMTKEANRLL 457
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 16/303 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M+ I D Y ++ K G + LF E + R L P+ + L D
Sbjct: 282 KTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR--GLRPNGI-TFTALIDGQ 338
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+S R + + M G+ D +Y +L+ + +V A +L E GM D
Sbjct: 339 CRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDK 398
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ Y +EG +E +E+ + M + + + +++GF + A + +
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G P TY +I+ YC+ G K+ EMQ G V+ Y+ ++ K G+
Sbjct: 459 MVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ 518
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK----------YTTVIS 297
+++A L+ M G P+ YN L++ H G+A++L +L YT+++S
Sbjct: 519 MKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTSLVS 578
Query: 298 AYN 300
YN
Sbjct: 579 EYN 581
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 19/285 (6%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y IL + K G + F +++++G+ + +LI +
Sbjct: 220 PPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFR 279
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L K EE + D+ + L+ +EG ++ ++ + M+ L + +++G
Sbjct: 280 LKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQC 339
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ R +A+ Y Q+++ G P V Y +++N C++G +KA K+ EM+ G +
Sbjct: 340 RSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKI 399
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
Y++++ Y K G + AM + M +G + + +L+ R +R E+
Sbjct: 400 TYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM 459
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNG---GVI 322
YT VI Y M K E ++NG GVI
Sbjct: 460 VEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVI 504
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 102/242 (42%), Gaps = 16/242 (6%)
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ E E G ++ + L+ + +EG + + ++ L + ++NG
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K R ++ + + P TY+ +I+ C+ G AE++F EMQQ+G +
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
+++++ ++ RI AM +M G +P++ +YN+L++ + ++ + K
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
YTT+I Y + + ++ G V+D ++ F + ++
Sbjct: 390 RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449
Query: 341 EE 342
+
Sbjct: 450 RD 451
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 3/258 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M +G++ D Y I+ F G K A +FL+ + D Y L D L K
Sbjct: 73 MVKSGVMPDCMTYNSIVHGFCSSG-QPKEAIVFLK--KMRSDGVEPDVVTYNSLMDYLCK 129
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+GR E K F M ++G+ D + Y +L+ +A+ + L G+ + V
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 189
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F LV Y ++ VE+ + V M+ LN + +++ K A+ +EQ+I
Sbjct: 190 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 249
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P + Y S+I++ C + KAE++F+EM +G + ++S++ + K GR+
Sbjct: 250 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVI 309
Query: 253 DAMRLVAKMKPKGCEPNV 270
++++L M G +P++
Sbjct: 310 ESVKLFDLMVRIGVKPDI 327
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 118/253 (46%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ F+K GD +K + + E +++ +P+ Y + +L K+ + ++
Sbjct: 15 YSTVINGFFKEGDLDKTYSTYNEMLDKRI--SPNVV-TYNSIIAALCKAQTVDKAMEVLT 71
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M + G++ D Y S++ F S + K A K+ G+ D+ + L+ + G
Sbjct: 72 TMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 131
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ ++ +SM L ++ G++ + A + + ++ G P ++
Sbjct: 132 RCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 191
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++ AY + +A VF +M+Q+G + V Y +++ + K+GR+ DAM +M +
Sbjct: 192 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE 251
Query: 265 GCEPNVWIYNSLM 277
G P+ +YNSL+
Sbjct: 252 GLRPDSIVYNSLI 264
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++NGF K Y +++ + P VTY SII A C+ KA +V M +
Sbjct: 17 TVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 76
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNL 286
G + Y+S+V + +G+ ++A+ + KM+ G EP+V YNSLMD +GR
Sbjct: 77 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 136
Query: 287 RQL 289
R++
Sbjct: 137 RKI 139
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 97/218 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + SG+ E + F + M+ G+ D Y SL+ A ++F
Sbjct: 85 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 144
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G+ D+ + L+ Y +G + + +++ M ++ + + ++V ++K+
Sbjct: 145 KRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVE 204
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ V+ ++ QG P VTY ++I+ C+ G A F +M +G + Y+S++
Sbjct: 205 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 264
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ A L +M +G + +NS++D H
Sbjct: 265 HSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSH 302
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 98/219 (44%), Gaps = 16/219 (7%)
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ +EG ++KT M + ++ + I+ K + A++V ++ G +P
Sbjct: 22 FFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 81
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+TY SI++ +C G +A +M+ G + VV Y+S++ K GR +A ++
Sbjct: 82 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 141
Query: 260 KMKPKGCEPNVWIYNSLM----------DMHG----RAKNLRQLEKY--TTVISAYNMAR 303
M +G +P++ Y +L+ +MHG +N Y + ++ AY
Sbjct: 142 SMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 201
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ + + +++ R G + G ++ V K ++E+
Sbjct: 202 KVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVED 240
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C P V+Y+++IN + + G K + EM K VV Y+S++A K + AM
Sbjct: 8 CPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAM 67
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ M G P+ YNS+ +HG
Sbjct: 68 EVLTTMVKSGVMPDCMTYNSI--VHG 91
>gi|302797282|ref|XP_002980402.1| hypothetical protein SELMODRAFT_32257 [Selaginella moellendorffii]
gi|300152018|gb|EFJ18662.1| hypothetical protein SELMODRAFT_32257 [Selaginella moellendorffii]
Length = 457
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 113/232 (48%), Gaps = 3/232 (1%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E +K ++ P Y +L + LG+ R E F+++ +G S Y+ ++C A
Sbjct: 92 EMQKRNVVPE-LATYLMLIEGLGRDHRVKEAFDLFQEIHARGFTAKASSYSYIVCGLAKY 150
Query: 109 AEV-KVAEELFKEAE-EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC 166
+ A +LF++ E E G + + L+ ++ VE+ E+ MK +
Sbjct: 151 GYFDEAAIQLFRKMEGEYGCPPNTYAYNVLLTGLKKKDGVEEMREMFLEMKEKGCEPNLV 210
Query: 167 ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
C + G K A+ V +++I + C P V Y+ +INA+C++G + EK+ EM
Sbjct: 211 TYCTYILGLCKAGRVDDAMVVKKEMIQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEM 270
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+K VV +SS+V K GR DA RL +M +GC+P+ I + ++D
Sbjct: 271 LEKKLQPDVVCFSSLVDCLDKAGRYGDAYRLFRRMMEQGCKPDAVIASVMLD 322
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 115/264 (43%), Gaps = 12/264 (4%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK G + YC + K G + A+ ++ E + +P + +Y IL ++
Sbjct: 199 EMKEKGCEPNLVTYCTYILGLCKAGRVDD--AMVVKKEMIQKSCSPDNV-VYSILINAFC 255
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ +E K +M EK + D ++SL+ A LF+ E+G D
Sbjct: 256 KVGKIYEGEKLLAEMLEKKLQPDVVCFSSLVDCLDKAGRYGDAYRLFRRMMEQGCKPDAV 315
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR----RAYWAAVKV 187
+ ++ + + G V + LE+V+ + +L + S +N KR V++
Sbjct: 316 IASVMLDSFTKRGEVAQALELVDEFVDRDLPLPSAGS---INQLVKRIVVGDKVEDGVRL 372
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK--VFIEMQQKGFDKCVVAYSSMVAMY 245
+ + S+G P Q +YA+++ CR +A + +F EM + G V +Y +V
Sbjct: 373 LKTMASRGSRPLQCSYATLLRELCRRKNAVEALELDLFQEMIESGRIPDVNSYEILVEAL 432
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPN 269
K G+I L ++ G P+
Sbjct: 433 CKAGKIFQGHELFKQLISLGFIPS 456
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 147/345 (42%), Gaps = 66/345 (19%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MK+ +V D Y ++ A+ + G+ + A + EC
Sbjct: 270 FNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVG------------------- 310
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ + Y LI F I +++ AE L + + +G+ +
Sbjct: 311 -------------------NGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLN 351
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMK--NAELNI--SDCISCVIVNGFSKRRAYWAAV 185
+F ++ Y +GMV+ L++ +M+ EL+I + ++C G + A
Sbjct: 352 QIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLAC----GLCRVNRLDEAK 407
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ +I G +P VTY ++I+ +C+ G +A ++F EM +KG VV Y+ M+ Y
Sbjct: 408 TLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGY 467
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------LRQLEK-------- 291
K G IR+A R +M+ KG P+V+ Y SL +HG N L+ E+
Sbjct: 468 TKKGSIREAERFRKEMEKKGFVPDVYTYASL--VHGHCVNGKVDVALKLFEEMKQRGTEP 525
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
YT +IS + + Y++ G + D ++ +VG
Sbjct: 526 NVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVG 570
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 150/325 (46%), Gaps = 19/325 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M G+ L++ CY +++ + + D +V + E+ ++ T + Y IL DSL
Sbjct: 201 DDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGT---YTILVDSL 257
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ ++ F +MK ++ D +Y ++I ++ ++ A ++ E G+ +
Sbjct: 258 STARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNE 317
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + + G +E ++ M+ + ++ I +++G+ ++ A+K+
Sbjct: 318 RTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAA 377
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G TY ++ CR+ +A+ + M + G V Y+++++++ K G
Sbjct: 378 MEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGD 437
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
+ +A RL +M KG P+V YN ++D + + ++R+ E+ Y +
Sbjct: 438 MVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYAS 497
Query: 295 VISAYNMAREFDMCVKFYNEFRMNG 319
++ + + + D+ +K + E + G
Sbjct: 498 LVHGHCVNGKVDVALKLFEEMKQRG 522
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T + I C K G E + FR+M EKG Y +I + ++ AE K
Sbjct: 426 TTLISIHC----KDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRK 481
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E E+KG + D+ + LV + G V+ L++ E MK + +++G +K
Sbjct: 482 EMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEG 541
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINA 209
AA ++Y+ ++ G IP Y++++ +
Sbjct: 542 RSEAAFQLYDDMLKAGLIPDDSLYSALVGS 571
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 35/218 (16%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
++ D L KSGR + + DM G+ + Y SL+
Sbjct: 182 VVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLL---------------------- 219
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D V K ++G V++ LE+ M+N + + ++V+ S R
Sbjct: 220 ----DCYVRQK------DDGRVQEILEI---MENEGIEATVGTYTILVDSLSTARDISKV 266
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ ++ + + Y ++INAYCR G +A KV E G + Y ++
Sbjct: 267 EALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLING 326
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+ K G++ A L+A M+ +G N I+N+++D + R
Sbjct: 327 FCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCR 364
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 19/180 (10%)
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
++S + V+V+G K A ++ + + G + Y S+++ Y R + ++
Sbjct: 174 SVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQE 233
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ M+ +G + V Y+ +V I L +MK +V++Y ++++ +
Sbjct: 234 ILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYC 293
Query: 282 RAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
RA N+R+ A+ D CV NG + G+++ F K+ Q+E
Sbjct: 294 RAGNMRR------------AAKVLDECVG-------NGVEPNERTYGVLINGFCKIGQME 334
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ ++M+ G V D Y ++ G + LF E + R T + Y L
Sbjct: 479 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRG---TEPNVVAYTALIS 535
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFAS 107
L K GR+ + + DM + G++ D S+Y++L+ S +
Sbjct: 536 GLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHT 574
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 106/215 (49%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L + + K GR E +KF M G + + ++ S S AE+L E
Sbjct: 54 YNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMV 113
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + F L+ +G++ + ++++E M + +++GF K +
Sbjct: 114 RKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMD 173
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ E ++S+GC P VTY +++ A C+ G A ++ ++ KG ++ Y++++
Sbjct: 174 RAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVI 233
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G+ A+ L+ +M+ KG +P+V Y+SL+
Sbjct: 234 DGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLI 268
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V+VNG K A+K + S G P +T+ I+ + C G + AEK+ EM +K
Sbjct: 56 VLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRK 115
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN---- 285
G VV ++ ++ + G + A+ ++ KM GC PN YN L +HG K
Sbjct: 116 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPL--LHGFCKEKKMD 173
Query: 286 --LRQLE------------KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
++ LE Y T+++A + D V+ N+ G
Sbjct: 174 RAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG 221
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++V ++ + + C P +TY +I A C +A K+ EM +G VV Y+ +V
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K GR+ +A++ + M G +PNV +N ++
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIIL 93
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 3/223 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
EKM + G +S Y ++ F K ++ A +LE + T Y + +L
Sbjct: 145 EKMPTHGCTPNSLSYNPLLHGFCKEKKMDR-AIQYLEIMVSRGCYPDIVT--YNTMLTAL 201
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G+ ++ + KG Y ++I + + + A EL E KG+ D+
Sbjct: 202 CKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDV 261
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ EG VE+ ++ ++ + + I+ G K + A+
Sbjct: 262 ITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAY 321
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+IS+GC P +V+Y +I GL +A ++ E+ +G K
Sbjct: 322 MISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVK 364
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 84/210 (40%), Gaps = 1/210 (0%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP+S Y L K + +++ M +G D Y +++ + +V A
Sbjct: 153 TPNSLS-YNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAV 211
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
EL + KG L + ++ + G ++ +E++ M+ L ++ G
Sbjct: 212 ELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGL 271
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
S+ A+K + + G P TY SI+ C+ +A M KG
Sbjct: 272 SREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTE 331
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
V+Y+ ++ G ++A+ L+ ++ +G
Sbjct: 332 VSYTILIEGIANEGLAKEALELLNELCSRG 361
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 7/275 (2%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGD-SEKVAALFLECESRKLDLTPSSTHMY 63
S L +M S+ I +D + +E + ++ LFL E R + P T Y
Sbjct: 110 SMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLME-RDFAVKPD-TRFY 167
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ L K+ + + M + D S + LI + +++ A + ++
Sbjct: 168 NVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPN 227
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D + F L+ +IEE VE L + E M + ++ V+VNG K
Sbjct: 228 YGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEE 287
Query: 184 AVK-VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ +YE+ +G P QVT+ +++N CR G + ++ M +KGF+ V Y+S++
Sbjct: 288 ALRFIYEE---EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLI 344
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ K G I +A+ ++ M + CEPN YN+L+
Sbjct: 345 SGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLI 379
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 17/282 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSE---KVAALFLE--CESRKLDLTPSSTHMYKI 65
E M + G+ D + +M+ F + D E ++ L +E CE LT S + +
Sbjct: 223 EDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCE-----LTSVSVN---V 274
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + L K GR E L+F + E+G D + +L+ +K E+ EKG
Sbjct: 275 LVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKG 332
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
D+ + L+ + G +++ +E++ M + + + ++ K AA
Sbjct: 333 FELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAAT 392
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++ L S+G +P T+ S+I C A ++F EM++KG D YS ++
Sbjct: 393 ELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESL 452
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
R+++A+ L+ +M+ GC NV +YN+L+D G KN R
Sbjct: 453 CSERRLKEALMLLKEMELSGCARNVVVYNTLID--GLCKNNR 492
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 13/270 (4%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G LD Y ++ K+G+ ++ + SR D P+ T Y L +L K
Sbjct: 328 MLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSR--DCEPN-TVTYNTLIGTLCK 384
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ R + KG+L D + SLI + ++A ELF+E +EKG D
Sbjct: 385 ENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFT 444
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV-----NGFSKRRAYWAAVKV 187
+ L+ E +++ L +++ E+ +S C V+V +G K A +
Sbjct: 445 YSILIESLCSERRLKEALMLLK-----EMELSGCARNVVVYNTLIDGLCKNNRVGDAEDI 499
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++Q+ G VTY ++IN C+ +A ++ +M +G Y++M+ + +
Sbjct: 500 FDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQ 559
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G I+ A +V M GCEP++ Y +L+
Sbjct: 560 QGDIKRAADIVQNMTLNGCEPDIVTYGTLI 589
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 3/261 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+ S G++ D + +++ + E LF E + + D Y IL +SL
Sbjct: 398 LTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCD---PDEFTYSILIESLCS 454
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R E L ++M+ G + VY +LI V AE++F + E G+ R
Sbjct: 455 ERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVT 514
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + VE+ ++++ M L ++ F ++ A + + +
Sbjct: 515 YNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMT 574
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
GC P VTY ++I C+ G A K+ +Q KG AY+ ++ K R +
Sbjct: 575 LNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTK 634
Query: 253 DAMRLVAKMKPKGCEPNVWIY 273
+AMRL +M KG P+V Y
Sbjct: 635 EAMRLFREMMEKGDPPDVITY 655
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
++ F +MKEKG D Y+ LI S S +K A L KE E G R++ V+ L+
Sbjct: 427 MELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDG 486
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ V ++ + M+ ++ S ++NG K + A ++ +Q+I +G P
Sbjct: 487 LCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPD 546
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+ TY +++ +C+ G +A + M G + +V Y +++ K GR+ A +L+
Sbjct: 547 KFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLR 606
Query: 260 KMKPKGCEPNVWIYNSLM 277
++ KG YN ++
Sbjct: 607 SVQMKGMVLTPQAYNPVI 624
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 120/295 (40%), Gaps = 16/295 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L + L ++G + L+ M EKG D Y SLI + E+ A E+
Sbjct: 305 FNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMV 364
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ + + L+ +E VE E+ + + + C ++ G
Sbjct: 365 SRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNRE 424
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++++E++ +GC P + TY+ +I + C +A + EM+ G + VV Y++++
Sbjct: 425 IAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLI 484
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------- 291
K R+ DA + +M+ G + YN+L++ ++K + + +
Sbjct: 485 DGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLK 544
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
YTT++ + + +NG D G ++G K +++
Sbjct: 545 PDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVD 599
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 7/198 (3%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
++GD+E + F + E L ++ SS Y L + L KS R E + M +G+
Sbjct: 492 RVGDAEDI---FDQME--MLGVSRSSV-TYNTLINGLCKSKRVEEAAQLMDQMIMEGLKP 545
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D Y +++ F ++K A ++ + G D+ + L+ + G V+ +++
Sbjct: 546 DKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLL 605
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR- 212
S++ + ++ ++ KR+ A++++ +++ +G P +TY + C
Sbjct: 606 RSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNG 665
Query: 213 IGLYSKAEKVFIEMQQKG 230
G +A +EM +KG
Sbjct: 666 GGPIQEAVDFTVEMLEKG 683
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 14/270 (5%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ ++ AF K G L+ E R + T T Y + D K R + F
Sbjct: 153 FSALINAFVKEGKVSGAEELYREMLRRNIFPT---TITYSSMIDGFCKHSRLEDAKHMFD 209
Query: 85 DMKEKGILEDPSVYASLI---C--------SFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
M KG D +LI C F + V VA++LF+E G+ D+
Sbjct: 210 LMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTC 269
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ E G +EK LE+ + + +++++ +I+NG K A ++ L
Sbjct: 270 NTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPV 329
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
G VTY +I + + G + +AE +++EM KG V Y+SMV + K R+ +
Sbjct: 330 NGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEE 389
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
A ++V M +GC P+V +++L+ + +A
Sbjct: 390 ARQMVDSMVSEGCSPDVVTFSTLIKGYCKA 419
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 149/343 (43%), Gaps = 37/343 (10%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP--SSTHMYK 64
L ++M G D+ Y I+ K+GD+ V+AL + RK+D + ++ +Y
Sbjct: 30 LALVDRMVEEGHQPDAVTYGTIVNGMCKLGDT--VSALNM---LRKMDESQIKANVVIYS 84
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ D L K G + F +M EKGI + Y +I + S + AE+L ++ E+
Sbjct: 85 AIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIER 144
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ D+ F L+ +++EG V E+ M + + +++GF K A
Sbjct: 145 NIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDA 204
Query: 185 VKVYEQLISQGCIPGQVTYASIIN-----------AYCRIGLYSKAEKVFIEMQQKGFDK 233
+++ ++S+GC P +T ++I+ +C++G + A+ +F EM G
Sbjct: 205 KHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSP 264
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYT 293
+V ++++A + G++ A+ + + S MD+ N+
Sbjct: 265 DIVTCNTLLAGLCENGKLEKALEMFKVFQ-----------KSKMDLDTATCNI------- 306
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+I+ + D +N +NG D I++GVF K
Sbjct: 307 -IINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVK 348
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 115/249 (46%), Gaps = 2/249 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P++ + L + L + GR + L M E+G D Y +++ + + A
Sbjct: 7 PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALN 66
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ ++ +E + ++ ++ +V ++G K + M + + +++G+
Sbjct: 67 MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYC 126
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ A ++ +I + P VT++++INA+ + G S AE+++ EM ++ +
Sbjct: 127 SYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTI 186
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
YSSM+ + K R+ DA + M KGC P++ N+L+D RAK R L +
Sbjct: 187 TYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAK--RHLIHGFCQV 244
Query: 297 SAYNMAREF 305
N+A++
Sbjct: 245 GNVNVAQDL 253
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 130/283 (45%), Gaps = 18/283 (6%)
Query: 8 HYYEKMKSAG---------IVLDSGCYC--QIMEAFYKIGDSEKVAALFLECESRKL--D 54
H ++ M S G ++D C ++ F ++G+ LF E S + D
Sbjct: 206 HMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPD 265
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+ +T + LC++ GK +A E+ K F+ K K L D + +I +V A
Sbjct: 266 IVTCNT-LLAGLCEN-GKLEKALEMFKVFQ--KSKMDL-DTATCNIIINGMCKGNKVDEA 320
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+LF G+ D+ + L+ ++++EG + ++ M + S +V+G
Sbjct: 321 WDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDG 380
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K+ A ++ + ++S+GC P VT++++I YC+ G ++F EM Q+G
Sbjct: 381 FCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVAD 440
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ Y++++ + K G + A + +M G P+ + S++
Sbjct: 441 TITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSML 483
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 107/234 (45%), Gaps = 3/234 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S G+ D ++ + G EK +F + K+DL ++ + I+ +
Sbjct: 254 FQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCN---IIING 310
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K + E F + G+ D Y LI F AE+++ E KG++
Sbjct: 311 MCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPS 370
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ +V + ++ +E+ ++V+SM + + ++ G+ K ++++
Sbjct: 371 TVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFS 430
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
++ +G + +TY ++I+ +C++G + A+ +F EM G + + SM+A
Sbjct: 431 EMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLA 484
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 2/167 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL K G + +M KGI+ Y S++ F ++ A ++
Sbjct: 339 YNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMV 398
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
+G D+ F L+ Y + G V+ LE+ M L ++D I+ +++GF K
Sbjct: 399 SEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGL-VADTITYNALIHGFCKVGDL 457
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
A ++E+++S G P +T+ S++ C K + ++Q+
Sbjct: 458 NGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504
>gi|294462101|gb|ADE76603.1| unknown [Picea sitchensis]
Length = 290
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 4/262 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q Y +M+ G + +C ++ F+K G+ K +F K + T S Y
Sbjct: 2 QQAEELYMEMRRRGSIFSEPVFCNLIGGFFKAGEIYKALDVF-HFIPEKFERTVMS---Y 57
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ D K+G+ E L++ + E + + + Y LI + + +++ AE+LF+ E
Sbjct: 58 NAVMDGFCKAGQLQEALQYLDKLPENNLGPNATSYTILISGYITQGKLQEAEKLFRSMAE 117
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG + D V+ L+ Y +EGM + +++E M +++N F+K+
Sbjct: 118 KGCIPDACVYNTLLDAYFKEGMFAEAEKLLEEMVTEHREPDSVTYTMLINEFTKQGKMEG 177
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+K++ +I G P Y C+ + +A+K+F M G + V Y +
Sbjct: 178 ALKIFANMIEAGLKPDVTVYNKWFGLLCKESKFDEAQKLFQRMVDGGQNPDVGTYDILTE 237
Query: 244 MYGKTGRIRDAMRLVAKMKPKG 265
+G+ GR +A +L + KG
Sbjct: 238 GFGQEGRAEEAKKLFRDILEKG 259
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 102/194 (52%), Gaps = 1/194 (0%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ + +M+ +G + V+ +LI F E+ A ++F EK R + + ++ +
Sbjct: 6 ELYMEMRRRGSIFSEPVFCNLIGGFFKAGEIYKALDVFHFIPEK-FERTVMSYNAVMDGF 64
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G +++ L+ ++ + L + ++++G+ + A K++ + +GCIP
Sbjct: 65 CKAGQLQEALQYLDKLPENNLGPNATSYTILISGYITQGKLQEAEKLFRSMAEKGCIPDA 124
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
Y ++++AY + G++++AEK+ EM + + V Y+ ++ + K G++ A+++ A
Sbjct: 125 CVYNTLLDAYFKEGMFAEAEKLLEEMVTEHREPDSVTYTMLINEFTKQGKMEGALKIFAN 184
Query: 261 MKPKGCEPNVWIYN 274
M G +P+V +YN
Sbjct: 185 MIEAGLKPDVTVYN 198
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Query: 37 DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
+SE F E L TH+ KI+ + LG++ + DM +KG+ D
Sbjct: 24 NSEHALQFFRWVERSNLFEHNRETHL-KII-EILGRASKLNHARCILLDMPKKGLEWDED 81
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
++ +I S+ V+ + +LF++ EE G+ R ++ + L + + G M
Sbjct: 82 MWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKM 141
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ + + V++ GF A + +E + S+ P +TY ++IN YCR+
Sbjct: 142 LSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVKKM 201
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+AEK F+EM+ K + VV Y++++ Y ++ DA+RLV +MK G +PN Y++L
Sbjct: 202 EEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTL 261
Query: 277 M 277
+
Sbjct: 262 L 262
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 109/259 (42%), Gaps = 4/259 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + ++KM+ G+ Y + + + G F + S ++ T H +
Sbjct: 97 QESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPT---RHTF 153
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ SG+ +FF DMK + I D Y ++I + + +++ AE+ F E +
Sbjct: 154 NVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKG 213
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
K + + + L+ Y+ V+ L +VE MK + + ++ G
Sbjct: 214 KNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSE 273
Query: 184 AVKVYEQLISQGCIPGQVT-YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + ++++ + P + + +I+++C++G A V M + Y ++
Sbjct: 274 ARSILKEMVDKYIAPTDNSIFMRLISSHCKVGNLDAAADVLKAMIRLSVPTEAGHYGVLI 333
Query: 243 AMYGKTGRIRDAMRLVAKM 261
Y K G+ A++L+ K+
Sbjct: 334 ENYCKAGQYDQAVKLLDKL 352
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 121/261 (46%), Gaps = 17/261 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
Y IM+ F K G + E CES ++P+ Y L + K+ LK
Sbjct: 596 YNSIMDGFIKEGSVSSALTAYREMCES---GVSPNVI-TYTTLINGFCKNNNTDLALKMR 651
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+M+ KG+ D + Y +LI F +++ A LF E + G+ + ++ L+ Y
Sbjct: 652 NEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNL 711
Query: 144 GMVEKTLEVVESMKNAELNISDCISC------VIVNGFSKRRAYWAAVKVYEQLISQGCI 197
+E L + + M + + ISC +++G K A+ +Y ++ ++G I
Sbjct: 712 NNMEAALNLQKRM------LGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGII 765
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P + Y +IN C G A+K+ EM++ V Y++++A + K G +++A RL
Sbjct: 766 PDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRL 825
Query: 258 VAKMKPKGCEPNVWIYNSLMD 278
+M KG PN Y+ L++
Sbjct: 826 HNEMLDKGLTPNDTTYDILIN 846
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 134/316 (42%), Gaps = 42/316 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYKILC 67
+ M G+ + Y +M+ ++K GD+E +F R +D + PS Y I
Sbjct: 511 FSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVF----DRMVDENIVPSD-FTYNIKI 565
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ L K GR E + EKG + Y S++ F V A ++E E G+
Sbjct: 566 NGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVS 625
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ + L+ + + + L++ M+N L + +++GF K++ A +
Sbjct: 626 PNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWL 685
Query: 188 YEQLISQGCIPGQVTYASIINAY----------------------CRIGLYSK------- 218
+ +L+ G P V Y S+I+ Y C + Y+
Sbjct: 686 FSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLK 745
Query: 219 ------AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
A ++ EM KG ++ Y+ ++ G++ +A +++A+M+ PNV I
Sbjct: 746 EGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPI 805
Query: 273 YNSLMDMHGRAKNLRQ 288
YN+L+ H +A NL++
Sbjct: 806 YNALIAGHFKAGNLQE 821
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 114/243 (46%), Gaps = 34/243 (13%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E KFF + K +G+ D + Y+ +I +F +V++A L K+ +KG + F ++
Sbjct: 262 EAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVI 321
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
+++G + + L + + M + + ++ ++ +V G+ K+ +A++ ++++ G
Sbjct: 322 GACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPS 381
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--------------------------- 230
P +VTYA +I C+ G +KA ++ +M+ K
Sbjct: 382 PNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKL 441
Query: 231 FDKCVV-------AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
FD+ V Y+S+++ K G++ +A L KM KG P YNS++ H R
Sbjct: 442 FDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQ 501
Query: 284 KNL 286
NL
Sbjct: 502 GNL 504
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 145/337 (43%), Gaps = 23/337 (6%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S L +++KM G + Y ++E K G+ K L+ + +++ ++ P+ +
Sbjct: 367 SALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNK--NICPTVFIVNS 424
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
++ L R E K F D + + Y SL+ ++ A L+++ +K
Sbjct: 425 LIRGFLKVESRE-EASKLF-DEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDK 482
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ + ++L + +G ++ V M + L + ++++G+ K A
Sbjct: 483 GLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYA 542
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V+++++ + +P TY IN C++G S+A+ + + +KGF + Y+S++
Sbjct: 543 FYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDG 602
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
+ K G + A+ +M G PNV Y TT+I+ +
Sbjct: 603 FIKEGSVSSALTAYREMCESGVSPNVITY-------------------TTLINGFCKNNN 643
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
D+ +K NE R G +D A G ++ F K IE
Sbjct: 644 TDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIE 680
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 128/283 (45%), Gaps = 14/283 (4%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
N + ++ + KS G+ LD+ Y +++AF K D E L + R PS
Sbjct: 258 NNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDM--RDKGWVPSEG 315
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
++ + K G E L+ +M G+ + V +L+ + ++ A E F +
Sbjct: 316 TFTSVIGACV-KQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDK 374
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN----GFS 176
E G + + L+ + G + K ++ MKN + C + IVN GF
Sbjct: 375 MNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNI----CPTVFIVNSLIRGFL 430
Query: 177 KRRAYWAAVKVYEQLISQGC-IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K + A K++++ ++ C I TY S+++ C+ G S+A ++ +M KG
Sbjct: 431 KVESREEASKLFDEAVA--CDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTK 488
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V+Y+SM+ + + G + A + + M G +PNV Y+ LMD
Sbjct: 489 VSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMD 531
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 116/272 (42%), Gaps = 9/272 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF---LECESRKLDLTPSSTHMYKIL 66
++KM G+ Y ++ + G+ + A++F L+C L P+ Y IL
Sbjct: 476 WQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDC-----GLKPNVI-TYSIL 529
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D K+G F M ++ I+ Y I + A+++ K+ EKG
Sbjct: 530 MDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGF 589
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + ++ +I+EG V L M + ++ + ++NGF K A+K
Sbjct: 590 VPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALK 649
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ ++G Y ++I+ +C+ A +F E+ G V Y+S+++ Y
Sbjct: 650 MRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYR 709
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ A+ L +M +G ++ Y +L+D
Sbjct: 710 NLNNMEAALNLQKRMLGEGISCDLQTYTTLID 741
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 7/216 (3%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPS 58
N+ L +M++ G+ LD Y +++ F K D E + LF E LD L+P+
Sbjct: 642 NNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSEL----LDGGLSPN 697
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S +Y L L + M +GI D Y +LI + +A +L+
Sbjct: 698 SV-IYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLY 756
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E KG++ D+ ++ L+ +G +E +++ M+ + + I ++ G K
Sbjct: 757 SEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKA 816
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
A +++ +++ +G P TY +IN + G
Sbjct: 817 GNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 127/266 (47%), Gaps = 3/266 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KMK GI + Y ++ F KI D+E F E + R L + +Y + +
Sbjct: 349 KMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTL---NAIIYGNIIYAHC 405
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
++ + R+M+E+GI +Y +++ + I + +F +E G +
Sbjct: 406 QACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVI 465
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ +YI+ G V K LEV + M+ A + + +++NGF + + + A V+E +
Sbjct: 466 SYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV 525
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ G P V Y +II A+C +G +A + EMQ++ + ++ + ++G +
Sbjct: 526 VKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDM 585
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
R A+ + M+ GC P V +N+L+
Sbjct: 586 RRALEIFDMMRWSGCIPTVHTFNALI 611
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 119/253 (47%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ I+ F + GD + +F + + + H + L L + + + ++
Sbjct: 572 FMPIIHGFARSGDMRRALEIF---DMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILD 628
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M GI + Y +++ +AS+ + A E F + + +G+ D+ + L+ + G
Sbjct: 629 EMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSG 688
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ L V M + ++ + + ++++G+++R W A ++ +Q+ +G P TY
Sbjct: 689 RMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYT 748
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S INA C+ G +A K EM+ G + Y++++ + + A++ +MK
Sbjct: 749 SFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSA 808
Query: 265 GCEPNVWIYNSLM 277
G +P+ +Y+ LM
Sbjct: 809 GLKPDKAVYHCLM 821
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 158/350 (45%), Gaps = 26/350 (7%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS---THMYKILCDS 69
M+ AGI + Y ++ F ++ D A+F + K L P ++ + C
Sbjct: 490 MEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDV--VKDGLKPDVVLYNNIIRAFC-G 546
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+G RA +K +M+++ + +I FA +++ A E+F G +
Sbjct: 547 MGNMDRAIRTVK---EMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPT 603
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+L +E+ +EK +E+++ M A ++ ++ I++G++ A + +
Sbjct: 604 VHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFT 663
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L ++G TY +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 664 KLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRG 723
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLE---------KYT 293
+ +A L+ +MK +G +P++ Y S + DM K ++++E YT
Sbjct: 724 DVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYT 783
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAG-IMVGVFSKLSQIEE 342
T+I + A + +K + E + G D+A+ +M + S+ S EE
Sbjct: 784 TLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEE 833
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 28 IMEAFY-KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDM 86
+M +Y + GD F +R ++ T +H+Y L + E L R M
Sbjct: 294 LMVTYYARRGDMHHARGTFESMRARGIEPT---SHVYTSLIHAYAVGRDMEEALSCVRKM 350
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
KE+GI Y+ L+ FA IA+ + A+ FKEA+E+ + ++ ++ + + +
Sbjct: 351 KEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNM 410
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
+ +V M+ ++ I +++G++ + V+++L G P ++Y +
Sbjct: 411 TQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCL 470
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
IN Y +IG SKA +V M+ G + YS ++ + + +A + + G
Sbjct: 471 INLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGL 530
Query: 267 EPNVWIYNSLM 277
+P+V +YN+++
Sbjct: 531 KPDVVLYNNII 541
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 84/183 (45%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ ++ +A ++ A F+ +G+ V+ L+ Y +E+ L V MK
Sbjct: 292 FGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMK 351
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ +S ++V GF+K AA +++ + + Y +II A+C+ +
Sbjct: 352 EEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMT 411
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+AE + EM+++G D + Y +M+ Y G + + ++K G P+V Y L+
Sbjct: 412 QAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLI 471
Query: 278 DMH 280
+++
Sbjct: 472 NLY 474
>gi|295831081|gb|ADG39209.1| AT5G42310-like protein [Capsella grandiflora]
Length = 185
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 94/170 (55%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A + KE E + + VF +L+ Y + G +KT +V++ MK+ + V+++
Sbjct: 4 ARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 63
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
F K A+ +++++S G P +VT+ ++I+ +C+ G + AE +F M+++G
Sbjct: 64 TFGKFNCLDHAMTTFDRMLSXGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRGCLP 123
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
C Y+ M+ YG R D RL+ KMK +G PNV + +L+D++G++
Sbjct: 124 CATTYNIMINSYGDQERWDDMKRLLXKMKSQGILPNVVTHTTLVDVYGKS 173
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 133/310 (42%), Gaps = 40/310 (12%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L + +M+ G + + I+ + ++ +F E E+R + P + Y
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDI---PPDSWSY 188
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL D L K+G+ E K FR M + GI Y +I + A ELFK
Sbjct: 189 GILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS 248
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS--------CVI---- 171
KG F L+ + + G +++ +++ M + + ++ D ++ C I
Sbjct: 249 KGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTD-DGHVPDVVTYSTLISGLCSIARVD 307
Query: 172 ------------------------VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
++G K A +V + ++S G P VTY +++
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
+ +CR G +A ++ +M +G VV Y+++V+ K R+ +A + A+MK GC
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427
Query: 268 PNVWIYNSLM 277
PN++ Y +L+
Sbjct: 428 PNLFTYTALI 437
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 108/225 (48%), Gaps = 2/225 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D L KSGR E L F +M+ G + + ++I +++ A ++F E E
Sbjct: 118 YNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ + D + L+ + G + + ++ M ++ + S V+++G
Sbjct: 178 ARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLD 237
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+++++ + S+GC P + T+ +I+A+C+ G +A ++ M G VV YS+++
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI 297
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+ R+ DA L+ M + C+P V N+L +HG K R
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL--IHGLCKAGR 340
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 116/268 (43%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++K+ +G+ + Y ++ + LF + R P S Y ++ D+
Sbjct: 33 FQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG---CPPSPVTYNVIIDA 89
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G E + M E G + D Y +++ V+ A LF E E G +
Sbjct: 90 SCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPN 149
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++L ++ +++ +V M+ ++ ++++G +K A K++
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFR 209
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ G P VTY +I+ C +A ++F M+ KG ++ ++ + K G
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG 269
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ +A RL+ +M G P+V Y++L+
Sbjct: 270 KMDEAFRLLKRMTDDGHVPDVVTYSTLI 297
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 120/290 (41%), Gaps = 22/290 (7%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
+++P S Y IL D L K+G+ + F+ + G+ Y SLI
Sbjct: 5 NVSPDSWS-YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIV 172
A ELF + +G + ++ + GM+E+ ++++ M + ++ D ++ ++
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIE-DGHVPDVVTYNTVM 122
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+G K A+ ++ ++ GC P + ++ +II C+ +A +VF EM+ +
Sbjct: 123 DGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIP 182
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+Y ++ K G++ +A +L +M G P+ YN
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYN------------------ 224
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
VI +A D ++ + R G R I++ K +++E
Sbjct: 225 -VVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDE 273
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 89/236 (37%), Gaps = 35/236 (14%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S + IL D+ K G+ E + + M + G + D Y++LI SIA V A L
Sbjct: 253 PSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312
Query: 118 F----------------------------KEAEE-------KGMLRDLEVFLKLVLMYIE 142
KEA E G D+ + LV +
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G E+ E++ M L + +V+G K A V+ Q+ S GC P T
Sbjct: 373 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
Y ++I +C G K+F EM G V Y ++ A K+GR A+ ++
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/218 (18%), Positives = 84/218 (38%), Gaps = 3/218 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G V D Y ++ I + L + R+ T + + L L
Sbjct: 279 KRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN---TLIHGL 335
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+GR E + M G D Y +L+ + + A EL + +G+ ++
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 395
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ LV + + + V MK++ + ++ GF +K++ +
Sbjct: 396 VTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE 455
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
++ G P V Y ++ C+ G ++A ++ E ++
Sbjct: 456 MVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 7/272 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L E+M + GI D+ Y ++ + E+ LF + ++++ + Y L
Sbjct: 134 LATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN---PNVVTYNTL 190
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L K+ R + F++M KG + Y +LI F ++ A+++F +
Sbjct: 191 INGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNC 250
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAA 184
+ ++ + L+ + G V+ EV++ M K N++ SC+I +GF K R A
Sbjct: 251 VPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT-YSCLI-DGFCKVRRVDEA 308
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
K+ EQ+++QG P VTY ++N+ CR A K+F M Q+ VV Y++++
Sbjct: 309 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 368
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
++ A RL A+M KGC P+ Y++L
Sbjct: 369 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 400
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 128/302 (42%), Gaps = 16/302 (5%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y + + L K+ R + L +M +GI D +Y ++ +V+ A
Sbjct: 111 PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 170
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF++ ++ + ++ + L+ + +E E+ + M ++ +++GF
Sbjct: 171 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 230
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K++ AA V+++++ C+P VTY ++I+ + G A +V M +KG V
Sbjct: 231 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 290
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
YS ++ + K R+ +A +L+ +M +G P V YN L++ RA L K
Sbjct: 291 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 350
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y T++ A ++ D + Y E G D + ++ ++
Sbjct: 351 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKV 410
Query: 341 EE 342
E
Sbjct: 411 HE 412
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+ +GF+K +VY+ ++ G Y +I+ C++G + +A K+ M+ K
Sbjct: 15 TVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLK 74
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
F + +AYS+++ K R+ +A L+ KM + P+ Y +++ + K +
Sbjct: 75 RFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVERLCKTKRI 130
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 3/159 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q+ + M G+ + Y +++ F K+ ++ L + ++ + T + Y
Sbjct: 271 QAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVT---Y 327
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL +SL ++ + + K FR M ++ Y +L+ + ++ A L+ E
Sbjct: 328 NILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIA 387
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN 162
KG D + L G V + E++E MK + N
Sbjct: 388 KGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRN 426
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 149/322 (46%), Gaps = 22/322 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M S G+ Y ++ A+ + G A+L L ++ ++PS Y + ++
Sbjct: 159 FDEMPSNGVARTVYVYTAVINAYGRNGQFH--ASLELLNGMKQERVSPS-ILTYNTVINA 215
Query: 70 LGKSGRAFE-ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ G +E +L F +M+ +GI D Y +L+ + A AE +F+ E G++
Sbjct: 216 CARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVP 275
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKV 187
D+ + LV + + +EK E++ M++ N+ D S V++ +++ + A+ V
Sbjct: 276 DINTYSYLVQTFGKLNRLEKVSELLREMESGG-NLPDITSYNVLLEAYAELGSIKEAMDV 334
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ Q+ + GC+ TY+ ++N Y + G Y +F+EM+ D Y+ ++ ++G+
Sbjct: 335 FRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGE 394
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
G ++ + L M + EPN+ Y L+ G+ +K
Sbjct: 395 GGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKA 454
Query: 292 YTTVISAYNMAREFDMCVKFYN 313
YT VI A+ A ++ + +N
Sbjct: 455 YTGVIEAFGQAALYEEALVVFN 476
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 134/313 (42%), Gaps = 3/313 (0%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +M+ GI D Y ++ A G ++ +F + P + Y L
Sbjct: 227 LGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNES--GIVPD-INTYSYL 283
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ GK R ++ + R+M+ G L D + Y L+ ++A + +K A ++F++ + G
Sbjct: 284 VQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGC 343
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + + L+ +Y + G + ++ MK + + +++ F + + V
Sbjct: 344 VANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVT 403
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ ++ + P TY +I A + GLY A+K+ + M +KG AY+ ++ +G
Sbjct: 404 LFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFG 463
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
+ +A+ + M G P V YNS + R ++ E + ++ + R+
Sbjct: 464 QAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVH 523
Query: 307 MCVKFYNEFRMNG 319
FR G
Sbjct: 524 SFNGVIKAFRQGG 536
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 32/292 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECES--RKLDLTP---------- 57
+ M +GIV D Y +++ F K+ EKV+ L E ES D+T
Sbjct: 265 FRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAE 324
Query: 58 --------------------SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
++ Y +L + GK GR ++ F +MK D
Sbjct: 325 LGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGT 384
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y LI F K LF + E+ + ++E + L+ + G+ E +++ M
Sbjct: 385 YNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMN 444
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ S ++ F + Y A+ V+ + G P TY S I+A+ R GLY
Sbjct: 445 EKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYK 504
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
+AE + M + G + V +++ ++ + + G+ +A++ +M+ CEPN
Sbjct: 505 EAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPN 556
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 38/287 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M++AG V ++ Y ++ + K G + V +FLE K+ T Y IL
Sbjct: 335 FRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEM---KVSNTDPDAGTYNILIQV 391
Query: 70 LGKSGRAFEILKFFRDM-----------------------------------KEKGILED 94
G+ G E++ F DM EKGI+
Sbjct: 392 FGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPS 451
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y +I +F A + A +F E G +E + + + G+ ++ ++
Sbjct: 452 SKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILS 511
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M + L ++ F + Y AVK Y ++ C P ++T +++ YC G
Sbjct: 512 RMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAG 571
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
L ++E+ F E++ G V+ Y M+A+Y K R+ DA L+ +M
Sbjct: 572 LVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEM 618
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 133/329 (40%), Gaps = 54/329 (16%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ + + F + GD ++ LF + R++ P+ H+Y I+ LG+ G + + F
Sbjct: 103 FALVFKEFAQRGDWQRSLRLF-KYMQRQIWCKPNE-HIYTIMITLLGREGLLDKCREVFD 160
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M G+ VY ++I ++ G
Sbjct: 161 EMPSNGVARTVYVYTAVINAYG-----------------------------------RNG 185
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA-VKVYEQLISQGCIPGQVTY 203
+LE++ MK ++ S ++N ++ W + ++ ++ +G P +TY
Sbjct: 186 QFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITY 245
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+++ A GL +AE VF M + G + YS +V +GK R+ L+ +M+
Sbjct: 246 NTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMES 305
Query: 264 KGCEPNVWIYNSLMDMHGRAKNL-------RQLE---------KYTTVISAYNMAREFDM 307
G P++ YN L++ + ++ RQ++ Y+ +++ Y +D
Sbjct: 306 GGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDD 365
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+ E +++ D I++ VF +
Sbjct: 366 VRDIFLEMKVSNTDPDAGTYNILIQVFGE 394
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 112/245 (45%), Gaps = 31/245 (12%)
Query: 121 AEEKGMLR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
A EKG D+E + + G + + L+ KN +L+++D ++ F++R
Sbjct: 61 AVEKGKYSYDVETLINRITALPPRGSIARCLD---PFKN-KLSLNDF--ALVFKEFAQRG 114
Query: 180 AYWAAVKVYEQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ ++++++ + Q C P + Y +I R GL K +VF EM G + V Y
Sbjct: 115 DWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVY 174
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-----------KNLR 287
++++ YG+ G+ ++ L+ MK + P++ YN++++ R +R
Sbjct: 175 TAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMR 234
Query: 288 Q------LEKYTTVISA---YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
+ Y T++ A + E +M + NE +G V D +V F KL+
Sbjct: 235 HEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNE---SGIVPDINTYSYLVQTFGKLN 291
Query: 339 QIEEL 343
++E++
Sbjct: 292 RLEKV 296
>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
Length = 642
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ ++ A + GD + A LF +L +T Y +L L GRA + R
Sbjct: 246 FNPVLRAMLRAGDVKGAAKLF---GFMQLKGCVPTTATYNVLVHGLLVCGRAGAAMGVMR 302
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M+ +G++ Y +++ VK A ++ +E E G+ + V+ ++ + + G
Sbjct: 303 RMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSG 362
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ L+V E+M + + + + ++ G + A ++ ++I C P +TY
Sbjct: 363 EIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYG 422
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
SII Y +IG S+A V+ EM G V+YS ++ GR++DAM + M +
Sbjct: 423 SIIQGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLDR 482
Query: 265 GCEPNVWIYNSLM 277
GC P+ Y S++
Sbjct: 483 GCAPDTIAYTSMI 495
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 113/269 (42%), Gaps = 4/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E + + D Y ++ A G + AL E + + + + + +
Sbjct: 197 HEIIPGWDLAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGV----VAAEAFNPVLRA 252
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ ++G K F M+ KG + + Y L+ A + + E +G++
Sbjct: 253 MLRAGDVKGAAKLFGFMQLKGCVPTTATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPG 312
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + +V + G V+ +V E M+ L ++ + ++ GF K A+KV+E
Sbjct: 313 VMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCALKVWE 372
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ P V Y+++I G ++AE +F EM ++ Y S++ Y K G
Sbjct: 373 AMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQGYFKIG 432
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A+ + +M GC PN Y+ L++
Sbjct: 433 DTSRALSVWEEMIGAGCVPNAVSYSILIN 461
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 134/277 (48%), Gaps = 5/277 (1%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E K L P +++ L D+L K+G E K F DM+EK + + SL+ +
Sbjct: 192 EMPKYGLEPDE-YVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCRE 249
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDC 166
++ A+E+ + +E G+ D+ VF L+ Y G + +++ M+ E N+ +C
Sbjct: 250 GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV-NC 308
Query: 167 ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
+ +I + A++V+ ++ GC VTY ++I+ +C+ G+ K V +M
Sbjct: 309 YTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM 368
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
++KG V Y ++ + K + + + L+ KMK +GC P++ IYN ++ + + +
Sbjct: 369 RKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEV 428
Query: 287 RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
++ + + A ++ D V N F G +I+
Sbjct: 429 KEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIE 465
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 102/230 (44%), Gaps = 6/230 (2%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE-VKVAEELFKEAEEKGMLRD 129
GK A++++ DM+++G + + Y LI + + + A +F E E G D
Sbjct: 285 GKMADAYDLMN---DMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + GM++K V++ M+ + S I+ K+ + +++ E
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIE 401
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +GC P + Y +I C++G +A +++ EM+ G V + M+ + G
Sbjct: 402 KMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
Query: 250 RIRDAMRLVAKMKPKG--CEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+ +A +M +G P SL++ R L + + IS
Sbjct: 462 FLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCIS 511
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 100/220 (45%), Gaps = 4/220 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK AG+ D + ++ + G + A L + RK P+ + Y +L +L
Sbjct: 261 QMKEAGLEPDIVVFTNLLSGYAHAG--KMADAYDLMNDMRKRGFEPN-VNCYTVLIQALC 317
Query: 72 KS-GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++ R E ++ F +M+ G D Y +LI F + + + +KG++
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
++++++ + ++ E+ LE++E MK + I V++ K AV+++ +
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+ + G PG T+ +IN + G +A F EM +G
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRG 477
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 152 VVESMK--NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
++E M+ N EL I + V++ F+ AV+V +++ G P + + +++A
Sbjct: 153 LIEEMRKTNPEL-IEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDA 211
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
C+ G +A KVF +M++K F + ++S++ + + G++ +A ++ +MK G EP+
Sbjct: 212 LCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPD 270
Query: 270 VWIYNSLMDMHGRA 283
+ ++ +L+ + A
Sbjct: 271 IVVFTNLLSGYAHA 284
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 3/280 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M ++ D Y ++ F ++G+ + L E R L + Y L D L +
Sbjct: 368 MLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVT---YNTLIDGLCR 424
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G LK DM +GI D Y L+ + + +A+E F E G+ D
Sbjct: 425 LGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFA 484
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ ++ G K ++ E M V VNG K A ++ +++I
Sbjct: 485 YTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMI 544
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G +P VTY S ++A+ G + ++F +M +G VV Y+ ++ + GR+
Sbjct: 545 RDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLD 604
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
AM +M+ KG PNV YN L++ + + + Q K+
Sbjct: 605 WAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKF 644
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 151/350 (43%), Gaps = 23/350 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS--THMYKILCD 68
++M AG+ + Y ++ + K G + AL+ E +R + T +S T MY
Sbjct: 296 QEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMY----- 350
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G+ + + DM +K ++ D Y +LI F + + A L E + +
Sbjct: 351 GFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSF 410
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + L+ G +E L++ E M N ++ V+VNG K A + +
Sbjct: 411 NIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFF 470
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++ G P Q Y + I ++G +KA K+ EM KGF V+ Y+ V K
Sbjct: 471 DEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKL 530
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKY 292
G + +A L+ KM G P+ Y S M H +LR+ + Y
Sbjct: 531 GNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTY 590
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
T +I A+ + D + ++ E + G V + +++ F K+ ++++
Sbjct: 591 TVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQ 640
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 105/199 (52%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
L+ +R M E GI + Y +++ SF EV+ A +L + +E+G F L+
Sbjct: 222 LEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLING 281
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
++G +++ +++ M A L +S ++ G+ K+ A+ ++E+++++G P
Sbjct: 282 LSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPT 341
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
++ +I+ +C+ G S A + +M +K +++Y++++ + + G I +A L+
Sbjct: 342 VASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLD 401
Query: 260 KMKPKGCEPNVWIYNSLMD 278
+++ + N+ YN+L+D
Sbjct: 402 ELRFRNLSFNIVTYNTLID 420
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 9/277 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THM 62
++ L E M + GI D Y ++ K+G+ F E + L P +
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFF--DEMLHVGLAPDQFAYT 486
Query: 63 YKILCD-SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+I+ + LG + +AF K +M KG D Y + + ++ A EL ++
Sbjct: 487 ARIVGELKLGDTAKAF---KLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKM 543
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS-KRRA 180
G + D + + ++E G + + E+ M + + V+++ + R
Sbjct: 544 IRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRL 603
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
WA + + ++ +G +P +TY +IN +C++ +A K FIEMQ+KG Y+
Sbjct: 604 DWA-MAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTI 662
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ G+ ++A+RL A+M K P+ + +L+
Sbjct: 663 LINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALL 699
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 101/224 (45%), Gaps = 1/224 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+ P+ T Y + S K G L M+E+G + LI + E++ A
Sbjct: 233 IRPTVT-TYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQA 291
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+ L +E + G+ + L+ Y ++G++ + L + E M ++ + I+ G
Sbjct: 292 KGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYG 351
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K A + ++ + +P ++Y ++I +CR+G +A + E++ +
Sbjct: 352 FCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFN 411
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+V Y++++ + G + A++L M +G P+V Y L++
Sbjct: 412 IVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVN 455
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 87/173 (50%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A E+++ E G+ + + ++ + + G V++ L++V M+ S+ V++N
Sbjct: 221 ALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLIN 280
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G SK+ A + +++ G TY +I YC+ GL +A ++ EM +G
Sbjct: 281 GLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSP 340
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
V ++++++ + K G++ DA + ++ M K P++ YN+L+ R N+
Sbjct: 341 TVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNI 393
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 4/185 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+KM G V D Y M A + G + +F + SR TP+ Y +L +
Sbjct: 541 QKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSR--GQTPTVV-TYTVLIHAH 597
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+GR + +F +M+EKG++ + Y LI F + ++ A + F E +EKG+ +
Sbjct: 598 ALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNK 657
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ G ++ L + M + C ++ K AV+ E
Sbjct: 658 YTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKV-QAVQFIES 716
Query: 191 LISQG 195
LI G
Sbjct: 717 LILDG 721
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%)
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+E+++ +P I+ L KA +V+ M + G V Y++M+ +
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
K G ++ A+ LV KM+ +GC P+ +N L++ + L+Q
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQ 290
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 142/332 (42%), Gaps = 23/332 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD-- 68
++M G+ D Y +++A+ + G E L E E+ + PSS +IL
Sbjct: 323 DEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAGFR 380
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G +AF +L R+M+ G+ D Y +I +F + A + F E+ +
Sbjct: 381 DRGDWQKAFAVL---REMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEP 437
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ + + G ++ +E+ E M+ + +++N ++ + +
Sbjct: 438 DVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAML 497
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ QG +P +TY ++++ Y R G Y +A M+ G Y ++V Y +
Sbjct: 498 SEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQR 557
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK------NLRQLEK----------Y 292
G A+ +V MK G E ++ + NSL++ G + ++ Q K Y
Sbjct: 558 GLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITY 617
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
TT++ A +FD Y E +G DR
Sbjct: 618 TTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 649
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 135/299 (45%), Gaps = 39/299 (13%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE-- 78
D+ + ++ AF + + AAL L ++ + LTP S + L +LG +GR E
Sbjct: 227 DAPLFSDLISAFARAALPD--AALELLASAQAIGLTPRSNAV-TALISALGSAGRVAEAE 283
Query: 79 --ILKFF--------------------------------RDMKEKGILEDPSVYASLICS 104
L+FF +M + G+ D + Y+ L+ +
Sbjct: 284 ALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 343
Query: 105 FASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS 164
+ + A L KE E G+ VF +++ + + G +K V+ M+ + +
Sbjct: 344 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPD 403
Query: 165 DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI 224
V+++ F K A+ ++++ + P VT+ ++I+A+C+ G + +A ++F
Sbjct: 404 RHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFE 463
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
EM++ Y+ M+ + G+ R ++++MK +G PN+ Y +L+D++GR+
Sbjct: 464 EMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRS 522
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 125/262 (47%), Gaps = 9/262 (3%)
Query: 24 CYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
Y +++ + +IG ++E+V +C + P Y +L D+ ++GR
Sbjct: 301 AYNALLKGYVRIGSLKNAEQVLDEMSQC-----GVAPDEA-TYSLLVDAYTRAGRWESAR 354
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
++M+ G+ V++ ++ F + + A + +E + G+ D + ++ +
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ + ++ + M+ E+ +++ K + A++++E++ C PG
Sbjct: 415 GKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGT 474
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
TY +IN + E + EM+++G ++ Y+++V +YG++GR ++A+ +
Sbjct: 475 TTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEA 534
Query: 261 MKPKGCEPNVWIYNSLMDMHGR 282
MK G +P+ +Y++L++ + +
Sbjct: 535 MKADGLKPSPTMYHALVNAYAQ 556
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M+ I D + +++A K G ++ LF E P T Y I+ +
Sbjct: 427 FDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESN---CPPGTTTYNIMINL 483
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ R + +MKE+G++ + Y +L+ + K A + + + G+
Sbjct: 484 LGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPS 543
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ LV Y + G+ + L VV++MK L +S + ++N F + R A V +
Sbjct: 544 PTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQ 603
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+ G P +TY +++ A R+ + K ++ EM G
Sbjct: 604 FMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSG 644
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 124/279 (44%), Gaps = 1/279 (0%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M GI D + ++ A K G AL L E R+ L P Y L +
Sbjct: 245 DTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVI-TYNTLISAC 303
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+S + + F DM D Y +++ + + AE LF+E EKG + D
Sbjct: 304 SQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDA 363
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + +EG V+K E + A ++ +++ + K AV +Y++
Sbjct: 364 ITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDE 423
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + GC P VTY +I++ ++ ++A KV +M G ++A+S+++ Y K GR
Sbjct: 424 MRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGR 483
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
DA M G +P+ Y ++D+ R+ + ++
Sbjct: 484 RADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKM 522
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 2/223 (0%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLIC--SFASIAEVKVAEELFKEAEEKGMLR 128
+SGR + + M ++GI D + +LI S + VA +L E + G+
Sbjct: 232 ARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRP 291
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ + +E + V E M +E +V+ + A +++
Sbjct: 292 DVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLF 351
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+L+ +G +P +TY S++ A+ + G K E ++ + GF K + Y++M+ MYGK
Sbjct: 352 RELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKM 411
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
GR+ A+ L +M+ GC P+ Y ++D G+ + + K
Sbjct: 412 GRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGK 454
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK--TLEVVE 154
V+ +++ +A A +L ++G+ DL F L+ + G + L+++
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLF 282
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
++ + L +++ S+ AV V+E +I+ C P TY ++++ + R G
Sbjct: 283 EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCG 342
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+AE++F E+ +KGF + Y+S++ + K G + ++ G + N YN
Sbjct: 343 KAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYN 402
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
+++ M+G+ M R D+ V Y+E R G D +M+
Sbjct: 403 TMIHMYGK------------------MGR-LDLAVGLYDEMRAMGCTPDAVTYTVMIDSL 443
Query: 335 SKLSQIEE 342
K+++I E
Sbjct: 444 GKMNRIAE 451
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + G+ G+A E + FR++ EKG + D Y SL+ +FA V E ++
Sbjct: 331 YNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLV 390
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G ++ + ++ MY + G ++ + + + M+ V+++ K
Sbjct: 391 KAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIA 450
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A KV E + G P + ++++I AY + G + AE F M G +AY M+
Sbjct: 451 EAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVML 510
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ ++G + L KM P+ +Y L+
Sbjct: 511 DVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLL 545
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 35/251 (13%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+L D+ K+G FE++K + MK G L + +Y S+I + E + E E
Sbjct: 855 LLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGA 914
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS-DCISCVIV---------NG 174
G DL + L+ MY G ++T +V S+ A L D + +IV G
Sbjct: 915 GFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEG 974
Query: 175 FS------------KRRAYWA-------------AVKVYEQLISQGCIPGQVTYASIINA 209
F+ K ++Y + A +++E++ S+ + Y ++
Sbjct: 975 FTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKI 1034
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
Y G +SKAE + M++ G + + ++ YG G+ R+A ++ +K E +
Sbjct: 1035 YRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVS 1094
Query: 270 VWIYNSLMDMH 280
Y+++ D +
Sbjct: 1095 TLPYSTVFDAY 1105
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 114/257 (44%), Gaps = 16/257 (6%)
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D ++ +LI ++A + A +F + G L ++ ++ I +G +++ VV
Sbjct: 779 DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVV 838
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
E +++ IS ++++ F+K + +K+Y + + G +P Y S+I+ C
Sbjct: 839 EELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHH 898
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
+ E + EM+ GF + ++++ MY G ++ + G EP+ Y
Sbjct: 899 NRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTY 958
Query: 274 NSLMDMH----------------GRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
N+L+ M+ G+ +L+ Y ++++A A + + + E R
Sbjct: 959 NTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRS 1018
Query: 318 NGGVIDRAMAGIMVGVF 334
++R++ +M+ ++
Sbjct: 1019 KSYQLNRSIYHMMMKIY 1035
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H E++ AG + Y ++ + K+G + L+ E R + TP + Y ++
Sbjct: 384 HTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEM--RAMGCTPDAV-TYTVMI 440
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
DSLGK R E K DM + G+ +++LIC++A AE F G+
Sbjct: 441 DSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVK 500
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
D +L ++ ++ G EK L + M N D + V++ +K
Sbjct: 501 PDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAK 550
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 115/273 (42%), Gaps = 30/273 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILC 67
++ M ++G+ D Y +++ F + GD+EK+ L+ RK+ D MY++L
Sbjct: 491 FDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLY-----RKMMNDNYRPDDDMYQVLL 545
Query: 68 DSLGKSGRAFEILKFFRDMK-----EKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+L K + EI + +DM+ GI+ + A + A +L K+A
Sbjct: 546 VALAKEDKCEEIEEVIQDMELLCRMNLGIISTMLIKARCVSQGA---------KLLKKAC 596
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G D++ ++ Y+ E+ L ++E + D IS + +++
Sbjct: 597 LQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEHVSFSQDLISECSIMLLCRKQTSI 656
Query: 183 AAVKVYEQLI-----SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+A + Y Q + Q C Y +I +S+A +VF +MQ G +
Sbjct: 657 SAYEQYSQRLMLKYPDQNC----NLYEYLITCLIEAEFFSEACQVFCDMQFIGIEASKSI 712
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
Y S+++ Y K G A RL+ G N+
Sbjct: 713 YESIISTYCKLGFPETAHRLMDDALQSGIPLNI 745
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/194 (17%), Positives = 79/194 (40%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+S R E +M ++G+ Y SL+ + A + A+++F+E K +
Sbjct: 967 RSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRS 1026
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
++ ++ +Y G K ++ MK + + +++ + A V L
Sbjct: 1027 IYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNL 1086
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S + Y+++ +AY + G Y+ +EM++ G + ++ + +
Sbjct: 1087 KSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQT 1146
Query: 252 RDAMRLVAKMKPKG 265
DA+ L+ ++ G
Sbjct: 1147 ADAILLLKSLQDCG 1160
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y M AG D+ + +++ K G L E +++ + + Y IL +
Sbjct: 365 YNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFE---PNVITYTILING 421
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K GR E + M KG+ + Y LIC+ ++ A +LF E KG D
Sbjct: 422 FCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPD 481
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ + +E+ L + M + + +V+ F R + A K+ +
Sbjct: 482 IYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVD 541
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ +GC +TY +I A C+ G K +F EM KG +++ + +++ +TG
Sbjct: 542 EMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTG 601
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ DA++ + M +G P++ YNSL++
Sbjct: 602 KVNDALKFLQDMIHRGLTPDIVTYNSLIN 630
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 126/267 (47%), Gaps = 5/267 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M + G+ L++ Y ++ A K G+ E+ LF E + + + L + L K
Sbjct: 438 MSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG---CKPDIYTFNSLINGLCK 494
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ + E L + DM +G++ + Y +L+ +F ++ A +L E +G D
Sbjct: 495 NHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNIT 554
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + G VEK L + E M + ISC ++++G + A+K + +
Sbjct: 555 YNGLIKALCKTGAVEKGLGLFEEMLGKGI-FPTIISCNILISGLCRTGKVNDALKFLQDM 613
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
I +G P VTY S+IN C++G +A +F ++Q +G + Y+++++ + G
Sbjct: 614 IHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMF 673
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMD 278
DA L+ K G PN ++ L++
Sbjct: 674 NDACLLLYKGVDSGFIPNEVTWSILIN 700
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 25/293 (8%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L ++GR E K M +G D Y L+ + +V A L + +
Sbjct: 284 GLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTV- 342
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVV-ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ L+ Y+ G E+ +++ +M A ++++G K+ +A+++
Sbjct: 343 ---LYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALEL 399
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++++ P +TY +IN +C+ G +A ++ M KG V Y+ ++ K
Sbjct: 400 LNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCK 459
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE----------------- 290
G I +A++L +M KGC+P+++ +NSL++ G KN + E
Sbjct: 460 DGNIEEALQLFGEMSGKGCKPDIYTFNSLIN--GLCKNHKMEEALSLYHDMFLEGVIANT 517
Query: 291 -KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y T++ A+ M K +E G +D ++ K +E+
Sbjct: 518 VTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEK 570
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 118/256 (46%), Gaps = 3/256 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ F K G E+ A + ++ L L +T Y L +L K G E L+ F
Sbjct: 415 YTILINGFCKQGRLEEAAEIVNSMSAKGLSL---NTVGYNCLICALCKDGNIEEALQLFG 471
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M KG D + SLI +++ A L+ + +G++ + + LV ++
Sbjct: 472 EMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRD 531
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ ++V+ M + + ++ K A + ++E+++ +G P ++
Sbjct: 532 SIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCN 591
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+I+ CR G + A K +M +G +V Y+S++ K G +++A L K++ +
Sbjct: 592 ILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSE 651
Query: 265 GCEPNVWIYNSLMDMH 280
G P+ YN+L+ H
Sbjct: 652 GIRPDAITYNTLISRH 667
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 107/246 (43%), Gaps = 11/246 (4%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R L LTP S L + + E+ F R +KG LI ++ +
Sbjct: 57 RSLSLTPISPFQLCKLLELPLDIPTSMEL--FQRAGAQKGYSHTFDACYLLIDKLGAVGD 114
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK-----NAELNISD 165
KV E+L K+ +++G+L +F+ ++ Y + G+ + ++ M + +
Sbjct: 115 FKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYN 174
Query: 166 CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
+ ++V+G R A V+ ++S+G P T+ ++ A C + A + +
Sbjct: 175 VVLDILVDGDCPR----VAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRD 230
Query: 226 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
M + G V Y +++ + R+ +A++L+ M CEP+V +N ++ RA
Sbjct: 231 MAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGR 290
Query: 286 LRQLEK 291
+ + K
Sbjct: 291 IHEAAK 296
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 128/267 (47%), Gaps = 1/267 (0%)
Query: 14 KSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
KS+G + Y +++A + S K++A + E + ++P+ + Y IL
Sbjct: 169 KSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPN-VYTYNILIRGFCSV 227
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G + L F +M+ G L + Y +LI ++ + + A L K KGM +L +
Sbjct: 228 GELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISY 287
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ EG +++ E++E M + ++NG+ K + A+ ++ +++
Sbjct: 288 NVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVR 347
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
G P VTY ++IN+ C+ ++A + F +M+ +G Y++++ + + G + +
Sbjct: 348 NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNE 407
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMH 280
A R++ +M G P+V YN+ + H
Sbjct: 408 AYRILNEMTESGFSPSVVTYNAFIHGH 434
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 14/247 (5%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
+R+M + + Y LI F S+ E++ F E E G L ++ + L+ Y +
Sbjct: 202 YREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCK 261
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G +++ +++SM + + + VI+NG + + A ++ E++ +G P +VT
Sbjct: 262 MGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 321
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y +++N YC+ G + +A + EM + G VV Y++++ K + AM +M+
Sbjct: 322 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 381
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE-----FDMCVKFYNEFRM 317
+G PN Y +L+D R L + AY + E F V YN F
Sbjct: 382 IRGLRPNERTYTTLIDGFSRQGLLNE---------AYRILNEMTESGFSPSVVTYNAFIH 432
Query: 318 NGGVIDR 324
V++R
Sbjct: 433 GHCVLER 439
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 153/357 (42%), Gaps = 23/357 (6%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q L + +M+ G + + Y +++A+ K+G ++ L S+ + S Y
Sbjct: 231 QKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLIS---Y 287
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ + L + G E + +M KG D Y +L+ + A + E
Sbjct: 288 NVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVR 347
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ + + L+ + + + +E + M+ L ++ +++GFS++
Sbjct: 348 NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNE 407
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ ++ G P VTY + I+ +C + +A V EM +KG VV+YS++++
Sbjct: 408 AYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIIS 467
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------- 290
+ + G + A ++ +M KG P+ Y+SL + G + R E
Sbjct: 468 GFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL--IQGLCEMRRLTEACDLSQEMLDMGL 525
Query: 291 -----KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YTT+I+AY + + + + ++E G + D +++ +K ++ E
Sbjct: 526 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTRE 582
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D + G E + +M E G Y + I + ++ A + +E
Sbjct: 392 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 451
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
EKG+ D+ + ++ + +G +++ ++ + M ++ ++ G + R
Sbjct: 452 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 511
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + ++++ G P + TY ++INAYC G +KA + EM KGF V YS ++
Sbjct: 512 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 571
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K R R+A RL+ K+ + P+ Y++L++
Sbjct: 572 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 607
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 127/282 (45%), Gaps = 5/282 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M G D Y ++ + K G+ + AL + E + ++PS Y L +S+
Sbjct: 308 EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ--ALVIHAEMVRNGVSPSVV-TYTALINSM 364
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+ ++FF M+ +G+ + Y +LI F+ + A + E E G +
Sbjct: 365 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 424
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
+ + + +E+ L VV+ M L D +S I++GF ++ A ++ +
Sbjct: 425 VTYNAFIHGHCVLERMEEALGVVQEMVEKGL-APDVVSYSTIISGFCRKGELDRAFQMKQ 483
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ +G P VTY+S+I C + ++A + EM G Y++++ Y G
Sbjct: 484 EMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG 543
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ A+ L +M KG P+ Y+ L++ + R+ ++
Sbjct: 544 DLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 585
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 26/258 (10%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ D Y I+ F + G+ ++ A ++ E + ++P + Y L L
Sbjct: 448 QEMVEKGLAPDVVSYSTIISGFCRKGELDR--AFQMKQEMVEKGVSPDAV-TYSSLIQGL 504
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ R E ++M + G+ D Y +LI ++ ++ A L E KG L D
Sbjct: 505 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 564
Query: 131 EVFLKLV------------------LMYIEEGMVEKTLE-VVESMKNAELNISDCISCVI 171
+ L+ L+Y E + T + ++E+ N E +
Sbjct: 565 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV----VAL 620
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ GF + A +V+E ++ + PG+ Y II+ +CR G KA ++ EM GF
Sbjct: 621 IKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGF 680
Query: 232 DKCVVAYSSMVAMYGKTG 249
V +++ K G
Sbjct: 681 VPHTVTVITLIKALFKEG 698
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 29/250 (11%)
Query: 48 CESRKL----DLT--------PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDP 95
CE R+L DL+ P Y L ++ G + L +M KG L D
Sbjct: 505 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 564
Query: 96 SVYASLICSFASIAEVKVAEEL-FKEAEEKGMLRDL----------EVFLKLVLMYIE-- 142
Y+ LI A + A+ L FK E+ + D+ + K V+ I+
Sbjct: 565 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGF 624
Query: 143 --EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+G++ + V ESM + + VI++G + A +Y+++I G +P
Sbjct: 625 CMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHT 684
Query: 201 VTYASIINAYCRIGLYSKAEKVFIE-MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VT ++I A + G+ + +V + ++ ++ +A +V + K G + + ++
Sbjct: 685 VTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELA-KVLVEINHKEGNMEAVLNVLT 743
Query: 260 KMKPKGCEPN 269
M G PN
Sbjct: 744 DMAKDGLLPN 753
>gi|255661020|gb|ACU25679.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 376
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 136/272 (50%), Gaps = 6/272 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+ + + + LD+ Y ++ F+++G + L+ E ++ +S + I+
Sbjct: 13 YKDIVESKLSLDAVVYNTMLNGFFRVGRIKDCFELW-ELMGKEGSRNVAS---FNIMMRG 68
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L +G+ E++ + MK+ G +ED Y L+ F +V + + + AE KG + D
Sbjct: 69 LFNNGKVDEVILIWELMKKSGFVEDSITYGILVHGFCKNGDVNKSLHVLEIAEMKGGVLD 128
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ ++ ++K + V+ M + + + ++NG + A++V++
Sbjct: 129 AFAYSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFEDAIRVFQ 188
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ S C P +TY ++IN C+ + +A + EM +KG++ CV+ YS ++
Sbjct: 189 EMGSTHCSPTIITYNTLINGLCKGERFGEAYDLVKEMLEKGWNPCVITYSMLIKGLCLCH 248
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ A++L ++ KG +P++ ++N L +HG
Sbjct: 249 KVEMALQLWYQVTSKGFKPDIQMHNIL--IHG 278
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 112/265 (42%), Gaps = 3/265 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E MK +G V DS Y ++ F K GD K + E + L + Y + +
Sbjct: 82 WELMKKSGFVEDSITYGILVHGFCKNGDVNKSLHVLEIAEMKGGVLDAFA---YSAMING 138
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K + + + M + G + VY +LI ++ + A +F+E
Sbjct: 139 LCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFEDAIRVFQEMGSTHCSPT 198
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + ++V+ M N +++ G A++++
Sbjct: 199 IITYNTLINGLCKGERFGEAYDLVKEMLEKGWNPCVITYSMLIKGLCLCHKVEMALQLWY 258
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+ S+G P + +I+ C +G A ++ +M +V +++++ + K G
Sbjct: 259 QVTSKGFKPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWNCAPNLVTHNTLMEGFYKDG 318
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYN 274
+R+A+ + A++ G +P++ YN
Sbjct: 319 DVRNALVIWARILRNGLQPDIISYN 343
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ ++ Y ++ + G + +AL E S+K+ P Y IL D L
Sbjct: 74 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM--VPDG-FTYSILFDGL 130
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G + +L F + G+ + L+ +V +AEE+ + G++
Sbjct: 131 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 190
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
++ L+ Y + G +E MK+ + ++NG K A + +
Sbjct: 191 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 250
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P T+ ++I+AY R G K V EMQ+ G VV+Y S+V + K G+
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 310
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
I +A+ ++ M K PN +YN+++D
Sbjct: 311 IPEAVAILDDMFHKDVLPNAQVYNAIID 338
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 122/276 (44%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MKS I D Y ++ K L +E + ++ T + L D+
Sbjct: 213 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT---VETFNTLIDA 269
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G++G+ + +M+E G+ + Y S++ +F ++ A + + K +L +
Sbjct: 270 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 329
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+V+ ++ Y+E G ++ +VE MK+ ++ S +++ G + A ++
Sbjct: 330 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 389
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L + IP V+Y ++I+A C G KA + M + G V Y +++ G G
Sbjct: 390 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 449
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
R+ + L KM P+ I+N +++ + + N
Sbjct: 450 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 485
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 125/288 (43%), Gaps = 41/288 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M ++ + Y +++ K GD E A L + L P++ Y +L
Sbjct: 38 FDEMTERAVLPNHITYNTMIDGHIKGGDLE--AGFRLRDQMVCHGLKPNAI-TYNVLLSG 94
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++GR E +M + ++ D Y+ L + L + + K ML
Sbjct: 95 LCRAGRMGETSALLDEMASQKMVPDGFTYSILF------------DGLSRNGDSKAML-- 140
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+F K Y++ G+ I D +++NG K A +V +
Sbjct: 141 -SLFGK----YLKNGVT----------------IGDYTCSILLNGLCKDGKVSIAEEVLQ 179
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L++ G +P +V Y ++IN YC+ G A F +M+ + + Y++++ K
Sbjct: 180 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 239
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
RI +A L+ +M+ G P V +N+L+D +GR QLEK V+S
Sbjct: 240 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG---QLEKCFIVLS 284
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 17/298 (5%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L P+ +Y L + ++G F MK + I D Y +LI + A
Sbjct: 186 LVPTRV-IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 244
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
++L E ++ G+ +E F L+ Y G +EK V+ M+ L + IVN
Sbjct: 245 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 304
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K AV + + + + +P Y +II+AY G +A + +M+ G
Sbjct: 305 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 364
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HG---RAKNLRQ 288
+V Y+ ++ +I +A ++ + P+ YN+L+ G +A +L+Q
Sbjct: 365 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 424
Query: 289 ----------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+ Y +IS A + Y + N V A+ IMV +SK
Sbjct: 425 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 482
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 90/218 (41%), Gaps = 3/218 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ G+ + Y I+ AF K G + A+ + + D+ P++ +Y + D+
Sbjct: 285 EMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK--DVLPNA-QVYNAIIDAYV 341
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G + MK GI Y LI + +++ AEE+ ++ D
Sbjct: 342 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 401
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ G ++K L++ + M + + +++G +Y+++
Sbjct: 402 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 461
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+ +P + ++ AY + G KAE + EM QK
Sbjct: 462 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 158/375 (42%), Gaps = 74/375 (19%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE-- 78
D+ + ++ AF + + AAL L ++ + LTP S + L +LG +GR E
Sbjct: 227 DAPLFSDLISAFARAALPD--AALELLASAQAIGLTPRSNAV-TALISALGTAGRVAEAE 283
Query: 79 --ILKFF--------------------------------RDMKEKGILEDPSVYASLICS 104
L+FF +M + G+ D + Y+ L+ +
Sbjct: 284 ALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDA 343
Query: 105 FASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS 164
+ + A L KE E G+ VF +++ + + G +K V+ M+ + +
Sbjct: 344 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPD 403
Query: 165 DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF- 223
V+++ F K A+ + ++ +G P VT+ ++I+A+C+ G + +A ++F
Sbjct: 404 RHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFE 463
Query: 224 ----------------------------------IEMQQKGFDKCVVAYSSMVAMYGKTG 249
EM+++G ++ Y+++V +YG++G
Sbjct: 464 EMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSG 523
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
R ++A+ + MK G +P+ +Y++L++ + + + YTT++ A +FD
Sbjct: 524 RYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLRPDVITYTTLMKALIRVEQFDKVP 583
Query: 310 KFYNEFRMNGGVIDR 324
Y E +G DR
Sbjct: 584 VIYEEMITSGCAPDR 598
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 104/240 (43%), Gaps = 15/240 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M++ G+ S + +I+ F GD +K A+ E ++ + H Y ++ D+
Sbjct: 358 KEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVR---PDRHFYNVMIDTF 414
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK + F M+E+GI D + +LI + A ELF+E E
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCVIVNGFSKRRAYWAAVKVY 188
+ ++ + E+ E ++ MK L NI + V V G S R Y A+
Sbjct: 475 TTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGR--YKEAIDCI 532
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGL------YSKAEKVFIEMQQKGFDKCVVAYSSMV 242
E + + G P Y +++NAY + GL Y+ K I ++Q FDK V Y M+
Sbjct: 533 EAMKADGLKPSPTMYHALVNAYAQRGLRPDVITYTTLMKALIRVEQ--FDKVPVIYEEMI 590
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 117/250 (46%), Gaps = 7/250 (2%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
LTP ++C L K+ + E + R M +G D Y S+I + + ++ A
Sbjct: 281 LTPDVITYNTLIC-GLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNA 339
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+++ ++ KG + D + L+ ++G +++ + V L + + +V G
Sbjct: 340 DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKG 399
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
S++ A+K+ ++ GC P TY +IN C+IG S A+ + I+ KG
Sbjct: 400 LSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPD 459
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTT 294
V +++++ Y K ++ +A+ +V +M G P+V YNS+++ L + KY
Sbjct: 460 VFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILN------GLCKAGKYED 513
Query: 295 VISAYNMARE 304
V+ + + E
Sbjct: 514 VMGTFKLMME 523
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 139/342 (40%), Gaps = 55/342 (16%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G V D YC ++ + GD ++ +F E + L P+ + L L + G
Sbjct: 350 GFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEK--GLKPNLV-LCNTLVKGLSQQGLI 406
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
+ LK +M E G D Y +I I V A+ L +A KG L D+ F L
Sbjct: 407 LQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTL 466
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ +G+ K+ A+++ +++ + G
Sbjct: 467 I-----------------------------------DGYCKKLKLDNAIEIVDRMWNHGV 491
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P +TY SI+N C+ G Y F M +KG ++ Y+ + + K ++ +A+
Sbjct: 492 SPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALN 551
Query: 257 LVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLE---KYTTVISAYN-MAREF 305
L+ +M+ KG P+V + +LM D+ G + ++++ K++ I+ YN M F
Sbjct: 552 LIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAF 611
Query: 306 ------DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+M K +N+ NG D +M+ F K I
Sbjct: 612 AGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNIN 653
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 98/210 (46%), Gaps = 3/210 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + L K+G+ +++ F+ M EKG + + Y L SF +V+ A L +E +
Sbjct: 498 YNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQ 557
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC--VIVNGFSKRRA 180
KG+ D+ F L+ + + G ++ ++ + + + + S I+ +++N F+ +
Sbjct: 558 NKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRV-DEQYKFSHTIATYNIMINAFAGKLN 616
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A K++ ++ G P TY +I+ +C+ G + + +KG + +
Sbjct: 617 MNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGR 676
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
++ R+ +A+ ++ M KG P V
Sbjct: 677 VLNCLCLKRRVHEAVGIIHLMVHKGIVPEV 706
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 99/221 (44%), Gaps = 1/221 (0%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + I S ++ R + +M +G Y ++I F A EL
Sbjct: 144 PDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHEL 203
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F+E G+ D+ F KL+ +G V+++ ++ + ++ + + + GF +
Sbjct: 204 FEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQ 263
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
R A+++ + + +G P +TY ++I C+ +AE +M +G++
Sbjct: 264 RAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFT 322
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y+S++ Y K G +++A +++ KG P+ Y SL++
Sbjct: 323 YNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLIN 363
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 98/222 (44%), Gaps = 11/222 (4%)
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE---EKGMLRDLE 131
+A EI + KE G Y +I E + EE+ E + G+L
Sbjct: 22 KALEIFNSVK--KEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEG-- 77
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMK--NAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V++ + Y +G +++ ++V E M N E ++ I+N + R + A KVY
Sbjct: 78 VYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQS--YNAIMNILVEYRYFDQAHKVYM 135
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G +P T+ + ++CR A ++ M +G + VAY +++ + +
Sbjct: 136 RMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEEN 195
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+A L +M G P++ +N L+ R ++++ E+
Sbjct: 196 HRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESER 237
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 99/222 (44%), Gaps = 7/222 (3%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G+ G+ E + F M +PSV Y +++ A +++ +KG++
Sbjct: 87 GRKGKIQEAVDVFERMDFFNC--EPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVP 144
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ F + + ++ +M + S C ++ GF + A +++
Sbjct: 145 DVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELF 204
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E+++ G P + + +I+ CR G ++E++ ++ ++G + + + + +
Sbjct: 205 EEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQR 264
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ +A+RL+ + +G P+V YN+L + G KN + +E
Sbjct: 265 AMLNEAIRLLDGVG-RGLTPDVITYNTL--ICGLCKNFKVVE 303
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 101/216 (46%), Gaps = 7/216 (3%)
Query: 63 YKILCDSLGKSGR---AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
YK + + LG G E+L R + G+LE VY + ++ +++ A ++F+
Sbjct: 43 YKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLE--GVYIGAMRNYGRKGKIQEAVDVFE 100
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI-VNGFSKR 178
+ ++ + ++ + +E ++ +V M++ + + D + I + F +
Sbjct: 101 RMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGI-VPDVYTFTIRMKSFCRT 159
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
AA ++ + SQGC V Y ++I + +A ++F EM G ++A+
Sbjct: 160 SRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAF 219
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ ++ + G ++++ RL+ K+ +G PN++ N
Sbjct: 220 NKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVN 255
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 142/332 (42%), Gaps = 23/332 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD-- 68
++M G+ D Y +++A+ + G E L E E+ + PSS +IL
Sbjct: 183 DEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAGFR 240
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G+ +AF +L R+M G+ D Y +I +F + A + F E+G+
Sbjct: 241 DRGEWQKAFAVL---REMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEP 297
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ + + G ++ +E+ + M+ + + +++N + + + +
Sbjct: 298 DVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAML 357
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ QG +P +TY ++++ Y R G + +A M+ G Y ++V Y +
Sbjct: 358 AEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQR 417
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKY 292
G A+ +V M+ G E + + NSL++ G + + + + Y
Sbjct: 418 GLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITY 477
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
TT++ A +F+ Y E +G DR
Sbjct: 478 TTLMKALIRVEQFEKVPVIYEEMITSGCAPDR 509
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 124/257 (48%), Gaps = 5/257 (1%)
Query: 35 IGDSEKVA---ALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGI 91
+G + +VA ALFLE ++ P T Y L K G + +M + G+
Sbjct: 133 LGSARRVAEAEALFLEF-FLAGEIKPR-TRAYNALLKGYVKIGSLKNAEQVLDEMSQCGV 190
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D + Y+ L+ ++ + A L KE E G+ VF +++ + + G +K
Sbjct: 191 APDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFA 250
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
V+ M + + V+++ F K A+ ++++ +G P VT+ ++I+A+C
Sbjct: 251 VLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHC 310
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ G + +A ++F EM++ Y+ M+ + G+ R ++A+MK +G PN+
Sbjct: 311 KGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNII 370
Query: 272 IYNSLMDMHGRAKNLRQ 288
Y +L+D++GR+ ++
Sbjct: 371 TYTTLVDVYGRSGRFKE 387
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M+ GI D + +++A K G ++ LF E P T Y I+ +
Sbjct: 287 FDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN---CPLGTTTYNIMINL 343
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ R + +MKE+G++ + Y +L+ + K A + + + G+
Sbjct: 344 LGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPS 403
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ LV Y + G+ + L VV++M+ L S + ++N F + R A V +
Sbjct: 404 STMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQ 463
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+ G P +TY +++ A R+ + K ++ EM G
Sbjct: 464 FMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSG 504
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI-SDCISCVIVNGFSKRRAYWAAVKV 187
D +F L+ + + + LE++ S + L S+ ++ +I + S RR A
Sbjct: 87 DAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALF 146
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
E ++ P Y +++ Y +IG AE+V EM Q G YS +V Y +
Sbjct: 147 LEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTR 206
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR A L+ +M+ G +P+ ++++ ++
Sbjct: 207 AGRWESARILLKEMEADGVKPSSYVFSRIL 236
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 1/279 (0%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M+ I D + ++ A K G AL L E R+ L P + Y L +
Sbjct: 18 DAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAI-TYNTLISAC 76
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ + + F +M D Y +++ + + AE +FKE EKG D
Sbjct: 77 SQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDA 136
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + +EG VE+ V E + A +++ + K A+ +Y++
Sbjct: 137 VTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDE 196
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + GC P VTY ++++ ++ S+A KV EM G +V +S+++ Y K+GR
Sbjct: 197 MRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGR 256
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
DA R +M G +P+ Y ++D+ R+ R+L
Sbjct: 257 QDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKL 295
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 124/274 (45%), Gaps = 9/274 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE---CESRKLDLTPSSTHMY 63
L +++ AG+ D+ Y ++ A + + + A+F E E R DL Y
Sbjct: 51 LELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRP-DL-----WTY 104
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ G+ G+A E F+++ EKG D Y SL+ +FA +V+ E + +E +
Sbjct: 105 NAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVK 164
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G +D + ++ MY + G ++ L + + M+ V+V+ K
Sbjct: 165 AGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISE 224
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A KV E++ G P VT++++I AY + G AE+ F M + G +AY M+
Sbjct: 225 AGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLD 284
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ ++ R M L M G +P+ +Y L+
Sbjct: 285 VFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLL 318
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 130/290 (44%), Gaps = 18/290 (6%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA--EVKVAEELFKEAEEKGMLRD 129
+SGR + + M+++ I D + +LI + A VA EL E + G+ D
Sbjct: 6 RSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPD 65
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + ++ + V E M +E +V+ + A +++
Sbjct: 66 AITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFK 125
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L+ +G P VTY S++ A+ + G + E+V E+ + GF K + Y++M+ MYGK G
Sbjct: 126 ELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMG 185
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YT 293
R+ A+ L +M+ GC P+ Y L+D G+ + + K ++
Sbjct: 186 RLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFS 245
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+I AY + D + ++ +G DR +M+ VF++ + +L
Sbjct: 246 ALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKL 295
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 10/275 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH---MY 63
L ++M + + D CY ++ +K G+ EKV ++ KL P + Y
Sbjct: 213 LDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVW-----DKLVKDPGARPNLATY 267
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ D L K GR E+ + + M + D Y LI +V A ++ E +
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G++ D ++ LV + + G V++ + +S A L + +++ G
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYN-IMIKGLFDSGMVDE 386
Query: 184 AVKVYEQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+++++ L CIP VT+ ++I+ C+ G +KA +F E + G V +YSSM+
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ DA+++ KM GC+PN IYN+L+
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALI 481
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 27/283 (9%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAF---------YKIGDSEKVAALFLECESRKLDLTPSST 60
Y ++ G+V+D+ Y +++ F +K DS A L R L
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL------RNL------- 368
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGI--LEDPSVYASLICSFASIAEVKVAEELF 118
Y I+ L SG E ++ + D+ EK + + D + +LI A +F
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF 427
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+EA G D+ + ++ G + ++V E M + I +++GF +
Sbjct: 428 EEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQV 487
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
AV++Y ++ GC P +TY ++I+ C+ Y +A V EM + GF + Y
Sbjct: 488 YRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTY 547
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
S++ +I DA+ + ++ KG + +V ++N L +HG
Sbjct: 548 GSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNIL--IHG 588
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 1/198 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y I+ SL G + F ++ + + D Y++L+C A + A +L E
Sbjct: 159 QTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDE 218
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRR 179
+ D+ + L+ + G EK + V + + K+ + V+++G K
Sbjct: 219 MPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+ +V+E++++ P +TY +I+ CR G A +V+ E+ + G Y+
Sbjct: 279 RFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYN 338
Query: 240 SMVAMYGKTGRIRDAMRL 257
S+V + + GR+++A +
Sbjct: 339 SLVKGFCQAGRVQEAWKF 356
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 45/272 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAF---YKIGDSEKVAALFLECESRKLDLTPSSTHM-YKI 65
YEKM G +S Y ++ F Y+ D+ ++ S+ D S T + Y
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRI-------YSKMADNGCSPTVITYNT 514
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L D L K+ + E R+M E G D + Y SLI S ++ A ++K+ KG
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D+ + L+ G V++ L V MK
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKE--------------------------- 607
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ C P VTY ++++ G KA ++ + + G + +++Y++ +
Sbjct: 608 -------KKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGL 660
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
RI + ++L+ ++ +G P V +N L+
Sbjct: 661 CSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV +++ L + P ++TY++++ + A + EM + VV Y++++
Sbjct: 177 AVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLG 236
Query: 244 MYGKTGRIRDAMRLVAKM-KPKGCEPNVWIYNSLMD---MHGR------------AKNLR 287
K G MR+ K+ K G PN+ YN ++D GR A NL+
Sbjct: 237 GCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296
Query: 288 -QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ Y +I + + D + Y+E G VID AM +V F + +++E
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQE 352
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/235 (16%), Positives = 101/235 (42%), Gaps = 5/235 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKE----KGILEDPSVYASLICSFASIAEVKVAEELF 118
+ L D+ ++ R + FF + + I + Y ++ S + ++ A LF
Sbjct: 122 HNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLF 181
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ + D + L+ ++ ++ L++++ M + + ++ G K
Sbjct: 182 DSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKA 241
Query: 179 RAYWAAVKVYEQLI-SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ ++V+++L+ G P TY +++ C+ G + + +V+ M V+
Sbjct: 242 GEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVIT 301
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
Y ++ ++G + A R+ +++ G + +YNSL+ +A +++ K+
Sbjct: 302 YGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356
>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 151/334 (45%), Gaps = 36/334 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF----LECESRKLDLTPSST--HMY 63
+++M++ + D Y ++ F K G + A+LF +E + DL S +
Sbjct: 130 FDEMRNRALAPDRYTYSTLITHFGKAGMFD--ASLFWLQQMEQDRVSGDLVLYSNLIELS 187
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ LCD +A I F +K GI+ D Y S+I F + A+ L KE E
Sbjct: 188 RKLCDY----SKAISI---FMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMRE 240
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYW 182
G++ D + L+ +Y+E + L V M A+ + D +C V+++ + +
Sbjct: 241 VGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPL-DLTTCNVMIDVYGQLDMAK 299
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +++ + G P V+Y +++ Y L+ +A +F MQ+K ++ VV Y++M+
Sbjct: 300 EADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMI 359
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+YGK+ A L+ +M+ +G EPN Y+T+IS + A
Sbjct: 360 KVYGKSLEHEKATNLMQEMQNRGIEPNAIT-------------------YSTIISIWGKA 400
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+ D + + R +G ID+ + M+ + +
Sbjct: 401 GKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYER 434
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 88/189 (46%), Gaps = 16/189 (8%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V++ + + + A +++++ ++ P + TY+++I + + G++ + +M+Q
Sbjct: 112 VVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFWLQQMEQD 171
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+V YS+++ + K A+ + ++K G P++ YNS++++ G+AK R+
Sbjct: 172 RVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREA 231
Query: 290 E----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
+ Y+T++S Y +F + + E +D +M+ V
Sbjct: 232 KLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDV 291
Query: 334 FSKLSQIEE 342
+ +L +E
Sbjct: 292 YGQLDMAKE 300
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/230 (17%), Positives = 97/230 (42%), Gaps = 8/230 (3%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + GKS + ++M+ +GI + Y+++I + ++ A LF++
Sbjct: 355 YNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLR 414
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D ++ +++ Y G+V ++ +K+ + + ++ A W
Sbjct: 415 SSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRETAIKILARAGRIEEATW 474
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVAYSS 240
V+ Q G + + +++ + R + +VF +M+ G+ D V+A
Sbjct: 475 ----VFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSNVIAL-- 528
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
++ YGK A L +M+ + C ++ ++ ++G K+ +E
Sbjct: 529 VLNAYGKLHEFEKADALYKEMQEEECVFPDEVHFQMLSLYGARKDFMMIE 578
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 96/221 (43%), Gaps = 7/221 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++K++S+G+ +D Y ++ A+ + G L E + D P T + KIL
Sbjct: 410 FQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHEL--KHPDSIPRETAI-KILA-- 464
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++GR E FR + G ++D SV+ ++ F+ + E+F++ G D
Sbjct: 465 --RAGRIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGAGYFPD 522
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V ++ Y + EK + + M+ E D + +++ + R+ + ++E
Sbjct: 523 SNVIALVLNAYGKLHEFEKADALYKEMQEEECVFPDEVHFQMLSLYGARKDFMMIEALFE 582
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+L S I + + + + Y R + A ++ M + G
Sbjct: 583 RLDSDPNINKKELHLVVASIYERKNRLNDASRIMNRMSKGG 623
>gi|356495758|ref|XP_003516740.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 554
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 128/277 (46%), Gaps = 3/277 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G L+S Y +++ + G +K + E R + L TH+ + D+ GK
Sbjct: 212 MKQKGFPLNSFVYSKVVGIYRDNGMWKKAIEVLEEIRERGISL---DTHICNSIIDTFGK 268
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G E LK F+ M+++G+ + + SLI + + LF + +E+G+ D ++
Sbjct: 269 YGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFTDMQEQGLYPDPKI 328
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F+ ++ E+G + ESMK + V+V+ + + + A + + L
Sbjct: 329 FVTIISCMGEQGKWGIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNARECVQALK 388
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S+G + + + NAY + GL + V M+ +G + +V + ++ +G GR
Sbjct: 389 SEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYM 448
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+AM + +K G P+V Y +LM RAK ++
Sbjct: 449 EAMSVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEV 485
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 119/259 (45%), Gaps = 3/259 (1%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
K GD ++ +L + E++ L+ ++ Y L ++LG GR E F++M G
Sbjct: 93 KEGDLDRAMSLLSQMEAKGFHLSSTA---YACLIEALGNVGRTSEADMLFKEMICDGYKP 149
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ Y SL+ F + +A + KE + G+ R E + + Y+ G +E T +
Sbjct: 150 KLNFYTSLLRGFLKKGLLGLANGVLKEMDYSGIWRSKETYQIFLDYYVGAGRLEDTWSTI 209
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
MK ++ + +V + + A++V E++ +G SII+ + +
Sbjct: 210 NVMKQKGFPLNSFVYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKY 269
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G +A K+F +MQ++G +V ++S++ + K G + L M+ +G P+ I+
Sbjct: 270 GELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFTDMQEQGLYPDPKIF 329
Query: 274 NSLMDMHGRAKNLRQLEKY 292
+++ G ++KY
Sbjct: 330 VTIISCMGEQGKWGIIKKY 348
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 128/261 (49%), Gaps = 7/261 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILCD 68
E+++ GI LD+ I++ F K G+ ++ LF ++ E + ++ ++ + K C
Sbjct: 245 EEIRERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNS-LIKWHC- 302
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G + F DM+E+G+ DP ++ ++I + + ++ F+ + +G
Sbjct: 303 ---KEGDFMKSFHLFTDMQEQGLYPDPKIFVTIISCMGEQGKWGIIKKYFESMKIRGNKE 359
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
V+ LV +Y + G + E V+++K+ + +S I CV+ N ++++ + V
Sbjct: 360 YGAVYAVLVDIYGQYGKFQNARECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVL 419
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ + ++G P V +INA+ G Y +A V+ +++ G VV Y++++ + +
Sbjct: 420 QIMEAEGIEPNIVMLNMLINAFGNAGRYMEAMSVYHHIKESGVSPDVVTYTTLMKAFIRA 479
Query: 249 GRIRDAMRLVAKMKPKGCEPN 269
+ + + +M+ C P+
Sbjct: 480 KKFDEVPIIYKEMENDRCTPD 500
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 131/273 (47%), Gaps = 7/273 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--CESRKLDLTPSSTHMYKILCDS 69
+M++ G L S Y ++EA +G + + LF E C+ K L ++ + L
Sbjct: 106 QMEAKGFHLSSTAYACLIEALGNVGRTSEADMLFKEMICDGYKPKLNFYTSLLRGFL--K 163
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G G A +LK +M GI Y + + ++ ++KG +
Sbjct: 164 KGLLGLANGVLK---EMDYSGIWRSKETYQIFLDYYVGAGRLEDTWSTINVMKQKGFPLN 220
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V+ K+V +Y + GM +K +EV+E ++ +++ I I++ F K A+K+++
Sbjct: 221 SFVYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEALKLFK 280
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P VT+ S+I +C+ G + K+ +F +MQ++G + ++++ G+ G
Sbjct: 281 KMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFTDMQEQGLYPDPKIFVTIISCMGEQG 340
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+ + MK +G + +Y L+D++G+
Sbjct: 341 KWGIIKKYFESMKIRGNKEYGAVYAVLVDIYGQ 373
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 76/201 (37%), Gaps = 19/201 (9%)
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+EG +++ + ++ M+ ++S ++ A +++++I G P
Sbjct: 93 KEGDLDRAMSLLSQMEAKGFHLSSTAYACLIEALGNVGRTSEADMLFKEMICDGYKPKLN 152
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
Y S++ + + GL A V EM G + Y + Y GR+ D + M
Sbjct: 153 FYTSLLRGFLKKGLLGLANGVLKEMDYSGIWRSKETYQIFLDYYVGAGRLEDTWSTINVM 212
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
K KG N ++ Y+ V+ Y + ++ E R G
Sbjct: 213 KQKGFPLNSFV-------------------YSKVVGIYRDNGMWKKAIEVLEEIRERGIS 253
Query: 322 IDRAMAGIMVGVFSKLSQIEE 342
+D + ++ F K +++E
Sbjct: 254 LDTHICNSIIDTFGKYGELDE 274
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 129/280 (46%), Gaps = 3/280 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ Y++M AGI D Y ++ A + G E+ LF E E R D P + Y L
Sbjct: 455 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER--DCKPDE-YSYSSL 511
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ + R ++ D+ + I + +L+ + + + AE+ F E +K
Sbjct: 512 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 571
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ V +V +Y + MV K +++ MK + +N+S +++ +S+
Sbjct: 572 SLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCEN 631
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ S G P + +Y ++I AY R G +A ++F EM+ G VV Y+ V Y
Sbjct: 632 ILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYV 691
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+A+ LV M +GC+PN YNS+++ + R L
Sbjct: 692 SNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKL 731
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 21/253 (8%)
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
R++ +G+L P V A+ I A + A L A D + LV +
Sbjct: 112 RELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGP----DAGAYTALVSAFSRA 167
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA-AVKVYEQLISQGCIPGQVT 202
G + V M ++ + + V+++ +SK W V++ + G P + T
Sbjct: 168 GRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYT 227
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y ++I+ R LY +A +VF EM+ GF+ V ++S++ +YGK R +A+ ++ +M+
Sbjct: 228 YNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEME 287
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFD 306
GC P+V YNSL+ + + L Q + YTT+IS + A + D
Sbjct: 288 RVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKID 347
Query: 307 MCVKFYNEFRMNG 319
+ Y+E NG
Sbjct: 348 AAIVEYDEMVRNG 360
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 133/320 (41%), Gaps = 64/320 (20%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYKILCDSLGKSGRAF- 77
D+G Y ++ AF + G A+F R +D + P+ Y ++ K +
Sbjct: 153 DAGAYTALVSAFSRAGRFRDAVAVF----RRMVDSGVQPAIV-TYNVVLHVYSKMAVPWK 207
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E+++ MKE G+ D Y +LI A K A ++F E + G D F L+
Sbjct: 208 EVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLL 267
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
+Y K R + A++V +++ GC
Sbjct: 268 DVY-----------------------------------GKARRHDEAIEVIQEMERVGCP 292
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P VTY S+I++Y + GL +A + EM+ KG VV Y+++++ + G+I A+
Sbjct: 293 PSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVE 352
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHG-RAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFR 316
+M GC+PN+ YN+L+ MHG R K F + ++EFR
Sbjct: 353 YDEMVRNGCKPNLCTYNALIKMHGVRGK--------------------FPEMMAVFDEFR 392
Query: 317 MNGGVIDRAMAGIMVGVFSK 336
G V D ++ VF +
Sbjct: 393 SAGFVPDIVTWNTLLAVFGQ 412
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 133/310 (42%), Gaps = 19/310 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G+ D Y ++ + ++ A +F E ++ + P + L D GK
Sbjct: 216 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFE--PDKV-TFNSLLDVYGK 272
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ R E ++ ++M+ G Y SLI S+ ++ A L +E E KGM D+
Sbjct: 273 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVT 332
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ G ++ + + M + C ++ R + + V+++
Sbjct: 333 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFR 392
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G +P VT+ +++ + + GL S+ VF EM++ G+ Y S+++ Y + G
Sbjct: 393 SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 452
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVI 296
AM++ +M G P+V YN+++ R Q EK Y++++
Sbjct: 453 LAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 512
Query: 297 SAYNMAREFD 306
AY A+ D
Sbjct: 513 HAYANAKRLD 522
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/383 (18%), Positives = 154/383 (40%), Gaps = 54/383 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+ G+ D Y ++ + G K+ A +E + + + Y L
Sbjct: 319 QEMEVKGMKPDVVTYTTLISGLDRAG---KIDAAIVEYDEMVRNGCKPNLCTYNALIKMH 375
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G G+ E++ F + + G + D + +L+ F +FKE ++ G + +
Sbjct: 376 GVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 435
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ L+ Y G+ + +++ + M A + +++ ++ + A K++ +
Sbjct: 436 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 495
Query: 191 LISQGCIPGQVTYASIINAYC-----------------------------------RIGL 215
+ + C P + +Y+S+++AY ++
Sbjct: 496 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNN 555
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
++AEK F+E++QK + ++MV++YGK +R ++++ MK + YNS
Sbjct: 556 LAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNS 615
Query: 276 LMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
LM M+ R + + E Y TVI AY + + ++E + +G
Sbjct: 616 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 675
Query: 320 GVIDRAMAGIMVGVFSKLSQIEE 342
D I V + S EE
Sbjct: 676 LKPDVVTYNIFVKSYVSNSMFEE 698
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 38/300 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++ +SAG V D + ++ F + G +V+ +F E +K P Y L S
Sbjct: 388 FDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM--KKAGYIPERD-TYVSLISS 444
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G ++ ++ M E GI D S Y +++ + A + AE+LF E EE+ D
Sbjct: 445 YSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 504
Query: 130 LEVFLKLVLMYIEEGMVE---------------------KTLEVVESMKNA--------- 159
+ L+ Y ++ KTL +V S N
Sbjct: 505 EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFL 564
Query: 160 ELNISDC-----ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
EL C + +V+ + K R K+ + TY S+++ Y R+G
Sbjct: 565 ELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLG 624
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
K E + E++ G +Y++++ YG+ G++++A RL ++MK G +P+V YN
Sbjct: 625 DCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYN 684
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 4/191 (2%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
K+ + + FLE ++ L ++ + GK+ ++ K MKE I
Sbjct: 552 KVNNLAEAEKAFLELRQKRCSL---DINVLNAMVSIYGKNRMVRKVEKILSLMKESAINL 608
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ Y SL+ ++ + + + E + E + G+ D + ++ Y +G +++ +
Sbjct: 609 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 668
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
MK + L + V + + A+++ +++QGC P + TY SI+ YCR
Sbjct: 669 SEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRN 728
Query: 214 GLYSKAEKVFI 224
G + A K+F+
Sbjct: 729 GKLTDA-KIFV 738
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 124/279 (44%), Gaps = 1/279 (0%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M GI D + ++ A K G AL L E R+ L P Y L +
Sbjct: 245 DTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVI-TYNTLISAC 303
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+S + + F DM D Y +++ + + AE LF+E EKG + D
Sbjct: 304 SQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDA 363
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + +EG V+K E + A ++ +++ + K AV +Y++
Sbjct: 364 ITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDE 423
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + GC P VTY +I++ ++ ++A KV +M G ++A+S+++ Y K GR
Sbjct: 424 MRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGR 483
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
DA M G +P+ Y ++D+ R+ + ++
Sbjct: 484 RADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKM 522
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLIC--SFASIAEVKVAE 115
++ ++ + +SGR + + M ++GI D + +LI S + VA
Sbjct: 219 ATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVAL 278
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+L E + G+ D+ + L+ + +E + V E M +E +V+
Sbjct: 279 DLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVH 338
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+ A +++ +L+ +G +P +TY S++ A+ + G K E ++ + GF K
Sbjct: 339 GRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNE 398
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+ Y++M+ MYGK GR+ A+ L +M+ GC P+ Y ++D G+
Sbjct: 399 ITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGK 445
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK--TLEVVE 154
V+ +++ +A A +L ++G+ DL F L+ + G + L+++
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLF 282
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
++ + L +++ S+ AV V+E +I+ C P TY ++++ + R G
Sbjct: 283 EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCG 342
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+AE++F E+ +KGF + Y+S++ + K G + ++ G + N YN
Sbjct: 343 KAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYN 402
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
+++ M+G+ M R D+ V Y+E R G D +M+
Sbjct: 403 TMIHMYGK------------------MGR-LDLAVGLYDEMRAMGCTPDAVTYTVMIDSL 443
Query: 335 SKLSQIEE 342
K+++I E
Sbjct: 444 GKMNRIAE 451
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + G+ G+A E + FR++ EKG + D Y SL+ +FA V E ++
Sbjct: 331 YNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLV 390
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G ++ + ++ MY + G ++ + + + M+ V+++ K
Sbjct: 391 KAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIA 450
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A KV E + G P + ++++I AY + G + AE F M G +AY M+
Sbjct: 451 EAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVML 510
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ ++G + L KM P+ +Y L+
Sbjct: 511 DVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLL 545
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 35/251 (13%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+L D+ K+G FE++K + MK G L + +Y S+I + E + E E
Sbjct: 855 LLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGA 914
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS-DCISCVIV---------NG 174
G DL + L+ MY G ++T +V S+ A L D + +IV G
Sbjct: 915 GFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEG 974
Query: 175 FS------------KRRAYWA-------------AVKVYEQLISQGCIPGQVTYASIINA 209
F+ K ++Y + A +++E++ S+ + Y ++
Sbjct: 975 FTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKI 1034
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
Y G +SKAE + M++ G + + ++ YG G+ R+A ++ +K E +
Sbjct: 1035 YRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVS 1094
Query: 270 VWIYNSLMDMH 280
Y+++ D +
Sbjct: 1095 TLPYSTVFDAY 1105
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 114/257 (44%), Gaps = 16/257 (6%)
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D ++ +LI ++A + A +F + G L ++ ++ I +G +++ VV
Sbjct: 779 DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVV 838
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
E +++ IS ++++ F+K + +K+Y + + G +P Y S+I+ C
Sbjct: 839 EELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHH 898
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
+ E + EM+ GF + ++++ MY G ++ + G EP+ Y
Sbjct: 899 NRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTY 958
Query: 274 NSLMDMH----------------GRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
N+L+ M+ G+ +L+ Y ++++A A + + + E R
Sbjct: 959 NTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRS 1018
Query: 318 NGGVIDRAMAGIMVGVF 334
++R++ +M+ ++
Sbjct: 1019 KSYQLNRSIYHMMMKIY 1035
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H E++ AG + Y ++ + K+G + L+ E R + TP + Y ++
Sbjct: 384 HTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLY--DEMRAMGCTPDAV-TYTVMI 440
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
DSLGK R E K DM + G+ +++LIC++A AE F G+
Sbjct: 441 DSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVK 500
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
D +L ++ ++ G EK L + M N D + V++ +K
Sbjct: 501 PDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAK 550
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILC 67
++ M ++G+ D Y +++ F + GD+EK+ L+ RK+ D MY++L
Sbjct: 491 FDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLY-----RKMMNDNYRPDDDMYQVLL 545
Query: 68 DSLGKSGRAFEILKFFRDMK-----EKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+L K + EI + +DM+ GI+ + A + A +L K+A
Sbjct: 546 VALAKEDKCEEIEEVIQDMELLCRMNLGIISTMLIKARCVSQGA---------KLLKKAC 596
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G D++ ++ Y+ E+ L ++E + D IS + +++
Sbjct: 597 LQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEHVSFSQDLISECSIMLLCRKQTSI 656
Query: 183 AAVKVYEQLISQGCIPGQV--TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+A + Y Q + PGQ Y +I +S+A +VF +MQ G + Y S
Sbjct: 657 SAYEQYSQRLMLK-YPGQNCNLYEYLITCLIEAEFFSEACQVFCDMQFIGIEASKSIYES 715
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+++ Y K G A RL+ G N+
Sbjct: 716 IISTYCKLGFPETAHRLMDDALQSGIPLNI 745
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/254 (16%), Positives = 98/254 (38%), Gaps = 3/254 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ AG D ++ + G+ ++ ++ L+ Y L
Sbjct: 910 EMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLE---PDEDTYNTLIVMYC 966
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+S R E +M ++G+ Y SL+ + A + A+++F+E K +
Sbjct: 967 RSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRS 1026
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
++ ++ +Y G K ++ MK + + +++ + A V L
Sbjct: 1027 IYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNL 1086
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S + Y+++ +AY + G Y+ +EM++ G + ++ + +
Sbjct: 1087 KSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQT 1146
Query: 252 RDAMRLVAKMKPKG 265
DA+ L+ ++ G
Sbjct: 1147 ADAILLLKSLQDCG 1160
>gi|255566203|ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536657|gb|EEF38299.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1072
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 5/265 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++EKMK++G D Y ++ + G E A + E + + L S +YKIL
Sbjct: 265 LLFFEKMKTSGCEPDEKIYKMMVHSLCNAGKGEVALAFYKEMVQKDMRLDLS---LYKIL 321
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
S+ KSG + DM + + V ++ SF +++ A EL ++ + K +
Sbjct: 322 LISMAKSGDVGAVHLVANDMSRLSQIPEHDVNVCILKSFCVAGKIREALELIRDLKNKDI 381
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L D E LV + +E+VE MK L I I +I+NG+ +++ A++
Sbjct: 382 LIDYEYLGTLVKGLCRGDRITDAVEIVEIMKKRNL-IDAKIYGIIINGYLRKKDLSKAIE 440
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++ G P TY ++ + Y K ++F EM ++G VA ++VA +
Sbjct: 441 LFQRMKESGIQPITSTYTELMQCLFNLNQYDKGFELFNEMLERGIRVDSVATMAIVAAHV 500
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVW 271
+ I +A + MK KG P W
Sbjct: 501 RQNHISEAWEVFNTMKDKGANP-TW 524
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 125/298 (41%), Gaps = 40/298 (13%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+YE M+ G ++ + ++ + + G +E F E + P+ + YK L
Sbjct: 742 FYE-MRRKGCLITPDTWAIMIMQYGRTGLTEISLKTFTEMKDN--GYIPNDS-TYKYLLI 797
Query: 69 SL-GKSGRAF-EILKFFRDMKEKGILEDPSV---YASLICSFASIAEVKVA--------- 114
SL GK GR E +K F +M + D V Y S +C ++E + +
Sbjct: 798 SLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGTYLSCLCEAGRLSEARKSTDSLCRIGY 857
Query: 115 -------------------EELFKEAEEKGMLR---DLEVFLKLVLMYIEEGMVEKTLEV 152
EE +E G R D + LV + +G E+ L
Sbjct: 858 TIPLSYSLYIRALCRSGRLEEALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEALAK 917
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ESMK A +N + + ++ F K + A++++E++ GC P VTY+++I Y
Sbjct: 918 IESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQDGCEPTVVTYSALIRGYMN 977
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ A V ++ KG YS ++ K G+ +A++L+++M G P+
Sbjct: 978 MERADDAWSVLNHLKLKGPKPDFKTYSMFISCLCKAGKSEEALQLLSRMLEDGIVPST 1035
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 118/293 (40%), Gaps = 46/293 (15%)
Query: 25 YCQIMEAF---YKIGDSEK----VAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAF 77
YC E + KI EK + +LF E + +TP + + I+ G++G
Sbjct: 715 YCHTKETYNMAMKISGREKDFKHMRSLFYEMRRKGCLITPDT---WAIMIMQYGRTGLTE 771
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE--ELFKEAEEKGMLRDLEV--- 132
LK F +MK+ G + + S Y L+ S KV E ++F E + D EV
Sbjct: 772 ISLKTFTEMKDNGYIPNDSTYKYLLISLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGT 831
Query: 133 FLKLVL---------------------------MYIE----EGMVEKTLEVVESMKNAEL 161
+L + +YI G +E+ L +++ +
Sbjct: 832 YLSCLCEAGRLSEARKSTDSLCRIGYTIPLSYSLYIRALCRSGRLEEALSLLDEVGTERS 891
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
+ +V+G ++ A+ E + G P Y S+I + + KA +
Sbjct: 892 TLDQYTYGTLVHGLLRKGRQEEALAKIESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQ 951
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+F +MQQ G + VV YS+++ Y R DA ++ +K KG +P+ Y+
Sbjct: 952 IFEKMQQDGCEPTVVTYSALIRGYMNMERADDAWSVLNHLKLKGPKPDFKTYS 1004
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 83/183 (45%), Gaps = 5/183 (2%)
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
+ K LF E KG L + + +++ Y G+ E +L+ MK+ +D
Sbjct: 734 DFKHMRSLFYEMRRKGCLITPDTWAIMIMQYGRTGLTEISLKTFTEMKDNGYIPNDSTYK 793
Query: 170 VIVNGF--SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
++ K R A+K++ ++I IP + + ++ C G S+A K +
Sbjct: 794 YLLISLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGTYLSCLCEAGRLSEARKSTDSLC 853
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+ G+ ++YS + ++GR+ +A+ L+ ++ + + + Y +L +HG + R
Sbjct: 854 RIGY-TIPLSYSLYIRALCRSGRLEEALSLLDEVGTERSTLDQYTYGTL--VHGLLRKGR 910
Query: 288 QLE 290
Q E
Sbjct: 911 QEE 913
>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
Length = 526
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 5/270 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK G+ D Y ++ + G+ + +F E K ++ P Y IL
Sbjct: 130 EMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEE--MLKANIEPDIV-TYNILASGFC 186
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
KSG E+ M + G+ + Y I F + AE LF EEKG+
Sbjct: 187 KSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEV 246
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-IVNGFSKRRAYWAAVKVYEQ 190
++ +V Y+ G + + + + N+ D SC ++N + A V +
Sbjct: 247 MYSSMVCGYLLSGWTDHAYMLFVRVAR-QGNLVDHFSCSKLINDLCRVGNVQGASNVCKI 305
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ +P ++Y+ +I+ YC+ G KA F +M Q+G V+ Y+ ++ Y K GR
Sbjct: 306 MLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGR 365
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+++A +L +M G +P+V Y L+D H
Sbjct: 366 LQEACQLFVQMTNLGIKPDVIAYTVLLDGH 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 148/350 (42%), Gaps = 54/350 (15%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+YE M S GI + +++ F K+G + +V A FL+ + L L +Y I D
Sbjct: 57 HYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKV---IYNIAMD 113
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ K+G E +K +MK G+ D Y LI + E++ A+++F+E + +
Sbjct: 114 TYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEP 173
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L + + G+V + ++++ M +
Sbjct: 174 DIVTYNILASGFCKSGLVMEVFDLLDRMAD------------------------------ 203
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
G P +TY I +CR G S+AE +F +++KG D V YSSMV Y +
Sbjct: 204 -----HGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLS 258
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR--------QLEK--------Y 292
G A L ++ +G + + + L++ R N++ LE Y
Sbjct: 259 GWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISY 318
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +IS Y + D ++++ G ID + I++ + K +++E
Sbjct: 319 SKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQE 368
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y ++ D L K R E K + +G D Y+ LI S+ + + A + ++
Sbjct: 3 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMV 62
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ + + L+ + + GM + + K++ L++ I + ++ + K
Sbjct: 63 SHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMN 122
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AVK+ ++ G P ++ Y +IN YC G A++VF EM + + +V Y+ +
Sbjct: 123 EAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILA 182
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
+ + K+G + + L+ +M G EPN Y + R NL + E V+
Sbjct: 183 SGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVV 236
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 22/229 (9%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M +V D Y +++ + + GD +K F + R L + +Y IL + K
Sbjct: 306 MLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSI---DVIVYTILMNGYCK 362
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+GR E + F M GI D Y L+ + + E L + E G+ ++
Sbjct: 363 AGRLQEACQLFVQMTNLGIKPDVIAYTVLL-------DGHLKETLQQGWE--GIAKERRS 413
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
FL + +++ SMK+ ++ V+++G K A +++++++
Sbjct: 414 FL----------LRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEML 463
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+G P Y ++IN YC G SKAE + EM KG + + +S +
Sbjct: 464 QKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 512
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 16/218 (7%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M E ++ D Y+ LI + ++ A F + ++G+ D+ V+ L+ Y + G
Sbjct: 306 MLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGR 365
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSK-------------RRAYWAAV---KVYE 189
+++ ++ M N + V+++G K RR++ K+
Sbjct: 366 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 425
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ P Y +I+ C+ +A ++F EM QKG AY++++ Y G
Sbjct: 426 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 485
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
I A L+ +M KG EP+ ++ L R++ ++
Sbjct: 486 EISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 523
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 19/164 (11%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ M G+ +D Y +M + K G ++ LF++ L + P Y +L D
Sbjct: 337 WFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQ--MTNLGIKPDVI-AYTVLLD 393
Query: 69 S------------LGKSGRAFEIL----KFFRDMKEKGILEDPSVYASLICSFASIAEVK 112
+ K R+F + K MK+ I D Y LI +
Sbjct: 394 GHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLV 453
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
A ELF E +KG+ D + L+ Y +G + K ++++ M
Sbjct: 454 EARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEM 497
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 126/269 (46%), Gaps = 13/269 (4%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D+ + G +M +KGI +Y +LI S +++ AE +F++ +
Sbjct: 189 YNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMK 248
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G+ +L + L+ Y + V++ L + + M + L + ++++ K R
Sbjct: 249 DSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELL 308
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AA + + Q+ G +P V + S+I+ Y + G S+A + +EM++ V YS ++
Sbjct: 309 AARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILI 368
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+ G + +A ++ +M+ +G N +YNSL+D + + N+ + A
Sbjct: 369 KNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEK-------------A 415
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
E KF+++ R NG D +M+
Sbjct: 416 LEIFKATKFFSDMRRNGLRPDALAYAVML 444
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 91/168 (54%), Gaps = 3/168 (1%)
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
++ +G + VF L++ + E G+V++ L V + A + C + ++NG K+ +
Sbjct: 110 SQLRGSKFNPSVFGVLIIAFSEVGLVDEALRVYLKV-GAFPAVQACNA--LLNGLLKKSS 166
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ ++Y ++S+ P VTY +++A CR G +A+ + EM +KG + VV Y++
Sbjct: 167 FDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTT 226
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
++ ++ +A + +MK G PN++ YN LMD + + N++Q
Sbjct: 227 LIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQ 274
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 94/215 (43%), Gaps = 6/215 (2%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y +L D K+ + L ++ M + G+ + + LI + + E+ A F +
Sbjct: 257 YTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQ 316
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ G++ ++ VF L+ Y + G + +++ M+ +++ +++ +
Sbjct: 317 MAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGT 376
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS------KAEKVFIEMQQKGFDKC 234
A + +++ +G V Y S+I+ YC+ G KA K F +M++ G
Sbjct: 377 VEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPD 436
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
+AY+ M+ + + D M L A M G PN
Sbjct: 437 ALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPN 471
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 79/193 (40%), Gaps = 2/193 (1%)
Query: 95 PSVYA--SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
P+V A +L+ + + EL+ + + + + LV +G V + +
Sbjct: 149 PAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSL 208
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ M + + I +++G A ++ Q+ G P TY +++ YC+
Sbjct: 209 ISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCK 268
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
+A ++ M G VV + ++ K + A R +M G PNV +
Sbjct: 269 TANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVV 328
Query: 273 YNSLMDMHGRAKN 285
+NSL+D + +A N
Sbjct: 329 FNSLIDGYSKAGN 341
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 139/313 (44%), Gaps = 52/313 (16%)
Query: 12 KMKSAGIVLD----SGC------YCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSS 59
++K A +VL+ +GC Y ++++ + +GD +K + R +L +
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T + K CDS G + A IL RD G D Y LIC F I++++ A LF
Sbjct: 465 T-IIKGYCDS-GNTTSALRILDLMRD---GGCKPDEWSYTELICGFCKISKMESAFGLFN 519
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E + G+ + + L+ Y ++ ++ ++E MK + + V+++G +K+
Sbjct: 520 EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQN 579
Query: 180 AYWAA-----------------------------------VKVYEQLISQGCIPGQVTYA 204
+ A ++++ ++I QGC+P +TY+
Sbjct: 580 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYS 639
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+I A + G +AE +F E+++ G + Y M+ Y +G++ A + +M
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699
Query: 265 GCEPNVWIYNSLM 277
GC+P +W Y L+
Sbjct: 700 GCQPTLWTYGVLI 712
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+T Y L + L SGR E R+M GIL I + + + A L
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F + + KG ++ + L+ G+++ + + M + + ++N +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
R A V + GC P VTY +I YC +G KA V M Q+G +V
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y++++ Y +G A+R++ M+ GC+P+ W Y L+
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 97/217 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L + G ++ + M +G+ + +Y ++I + V AE + K+
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 242
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E M D + ++L + + ++ L+V M + ++NG
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 302
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + ++I G +P T I A C +G Y A ++F++M+ KG + V Y++++
Sbjct: 303 EAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALI 362
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ +G ++ A+ L +M G PN YN+L+++
Sbjct: 363 SGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINI 399
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+ F + + G+ Y++L+ + + + + +G+ +L ++ ++
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
++G V +++ + +E++ ++ G ++ +A++V+ Q+ +GC P
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY+++IN C G ++A + EM G + + G DA RL
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344
Query: 260 KMKPKGCEPNVWIYNSLM 277
MK KGCEPNV+ Y +L+
Sbjct: 345 DMKNKGCEPNVYTYTALI 362
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 113/281 (40%), Gaps = 38/281 (13%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
AF +L M G + Y +I + + + K A + ++G +L +
Sbjct: 409 AFVVLNL---MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
++ Y + G L +++ M++ + ++ GF K +A ++ +++ G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 196 CIPGQVTYASIINAYCR------------------------------IGL-----YSKAE 220
P +VTY ++I+ YC+ GL +S AE
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
++ M ++G VV Y++M+ K G A+ + KM +GC PN+ Y+SL+
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Query: 281 GRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
G+ + + E + + + + VK + M+G V
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 19/228 (8%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D L K+G L+ F M E+G L + Y+SLI + +V+ AE LF E E
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G++ D ++K++ YI G VE + M A + V++ G + Y
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL--KNEYL 720
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK--GFDK--CVVAY 238
A + L +P C G + + M K D V
Sbjct: 721 LADQRLAAL--PDVVPN-----------CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+++V+ GR +A L+ M +G P+ YNSL+ R +N+
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNV 815
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 33 YKIGDSEKVAALFLECESRKLDLTPS-STHMYKILCDSLGKSGRAFEILKFFRDMKEKGI 91
Y+ D + V+ + ++ +L P S + L +L +GR FE + M +G+
Sbjct: 740 YQTTDQDAVSVM----SAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGL 795
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D Y SL+CS + V +A +FK +G L + +L+ + ++
Sbjct: 796 CPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARI 855
Query: 152 VVESMKNAELNISDCISCVIVNGF 175
E+M N D + V+++G
Sbjct: 856 TFENMLMRTWNPDDVVQAVLIDGL 879
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 128/264 (48%), Gaps = 11/264 (4%)
Query: 21 DSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
D GC Y +++ K + ++ LF +S ++ +PS Y L D L ++G
Sbjct: 3 DHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKS--VECSPSMV-TYNTLLDGLFRTG 59
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+ + F++M ++ D + L+ +++ A E F++ +++ ++ +
Sbjct: 60 KLERAMALFQEMLDRRS-HDVISFNILVTGLCRAGKIETALEFFRKMDDRCS-PNVITYS 117
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ + V + +E++ESMK + ++V+G K AA +V +++
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
GC+P VTY S+++ CR S A + +M +G VV Y +++ K GR++DA
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMD 278
++A M KG P++ IYN L++
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLIN 261
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 128/331 (38%), Gaps = 27/331 (8%)
Query: 19 VLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+LD+GC Y ++ + AL + R TP+ Y L D L K
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGC--TPNVV-TYGTLIDGLCK 230
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR + DM +KG D +Y LI +V + L + A G+ D+
Sbjct: 231 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 290
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ +++ ++ +K+ + +++G K A +YE +
Sbjct: 291 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMT 350
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
GC VTY+++I+ C+ G +A + M + G + Y+S++ +
Sbjct: 351 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 410
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFY 312
+A+ LV +M+ C P+ YN L +HG + M R + ++
Sbjct: 411 EAIELVEEMERSNCAPSAVTYNIL--IHGMCR----------------MERVDSAALDYF 452
Query: 313 NEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
E NG + D I++ K + EL
Sbjct: 453 QEMIDNGVIPDHITYSILLEGLKKSKDLHEL 483
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 116/275 (42%), Gaps = 22/275 (8%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M++ G + Y SLI E A+ELF+ + + + L+ G
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 146 VEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+E+ + + + M + + D IS ++V G + A++ + ++ + C P +TY+
Sbjct: 61 LERAMALFQEMLDRRSH--DVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYS 117
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+I+ C+ S+A ++ M+ +G V+ Y+ +V K ++ A ++ +M
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177
Query: 265 GCEPNVWIYNSLMDMHGRAKNLR----------------QLEKYTTVISAY-NMAREFDM 307
GC PN+ YNSL+ RA+ + + Y T+I + R D
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
C + GG D + +++ K Q++E
Sbjct: 238 CAMLADMID-KGGTPDLMIYNMLINGLCKADQVDE 271
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 120/250 (48%), Gaps = 2/250 (0%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+ + +SE F E L TH+ KI+ + LG++ + DM
Sbjct: 15 VYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHL-KII-EILGRASKLNHARCILLDMP 72
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+KG+ D ++ +I S+ V+ + ++F++ EE G+ R ++ + L + + G
Sbjct: 73 KKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYM 132
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
M + + + V++ GF A + +E + S+ +P VTY +++
Sbjct: 133 MAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMV 192
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N YCR+ +AEK F+EM+ + + VV Y++++ Y R+ DA+R V +MK G +
Sbjct: 193 NGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMKGFGMK 252
Query: 268 PNVWIYNSLM 277
PN Y++L+
Sbjct: 253 PNAITYSTLL 262
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/259 (18%), Positives = 105/259 (40%), Gaps = 4/259 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + ++KM+ G+ Y + + + G F + S ++ T H +
Sbjct: 97 QESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPT---RHTF 153
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ SG+ +FF DMK + I+ D Y +++ + + +++ AE+ F E +
Sbjct: 154 NVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKG 213
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + + + L+ Y+ V+ L VE MK + + ++ G
Sbjct: 214 RNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMKGFGMKPNAITYSTLLPGLCNAEKMSE 273
Query: 184 AVKVYEQLISQGCIPGQVT-YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + ++++ + P + + +I+ C+ G A V M + Y ++
Sbjct: 274 ARSILKEMVDKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLI 333
Query: 243 AMYGKTGRIRDAMRLVAKM 261
Y K G A++L+ K+
Sbjct: 334 ENYCKAGEYDKAIKLLDKV 352
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 101/240 (42%), Gaps = 18/240 (7%)
Query: 95 PSVYASLICS-FASIAEVKVAEELFKEAEEKGML-RDLEVFLKLVLMYIEEGMVEKTLEV 152
PS+ L+ + S + A + F+ E + + E LK++ + + +
Sbjct: 8 PSIDHELVYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCI 67
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ M L + + ++++ + K +VK+++++ G +Y ++ R
Sbjct: 68 LLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILR 127
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
G Y A++ F +M +G + ++ M+ + +G++ A R MK + P+V
Sbjct: 128 RGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVT 187
Query: 273 YNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFR 316
YN++++ + R K + + EK YTT+I Y D ++F E +
Sbjct: 188 YNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMK 247
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 3/258 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M +G++ D Y I+ F G K A +FL+ + D Y L D L K
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSG-QPKEAIVFLK--KMRSDGVEPDVVTYNSLMDYLCK 198
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+GR E K F M ++G+ D + Y +L+ +A+ + L G+ + V
Sbjct: 199 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 258
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F LV Y ++ VE+ + V M+ LN + +++ K A+ +EQ+I
Sbjct: 259 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 318
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P + Y S+I++ C + KAE++F+EM +G + ++S++ + K GR+
Sbjct: 319 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVI 378
Query: 253 DAMRLVAKMKPKGCEPNV 270
++ +L M G +P++
Sbjct: 379 ESGKLFDLMVRIGVKPDI 396
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 116/253 (45%), Gaps = 10/253 (3%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ F+K GD +K+ + R ++P+ Y + +L K+ + ++
Sbjct: 91 YSTVINGFFKEGDLDKM------LDQR---ISPNVV-TYNSIIAALCKAQTVDKAMEVLT 140
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M + G++ D Y S++ F S + K A K+ G+ D+ + L+ + G
Sbjct: 141 TMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 200
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ ++ +SM L ++ G++ + A + + ++ G P ++
Sbjct: 201 RCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 260
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++ AY + +A VF +M+Q+G + V Y +++ + K+GR+ DAM +M +
Sbjct: 261 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE 320
Query: 265 GCEPNVWIYNSLM 277
G P+ +YNSL+
Sbjct: 321 GLRPDSIVYNSLI 333
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 97/218 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + SG+ E + F + M+ G+ D Y SL+ A ++F
Sbjct: 154 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 213
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G+ D+ + L+ Y +G + + +++ M ++ + + ++V ++K+
Sbjct: 214 KRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVE 273
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ V+ ++ QG P VTY ++I+ C+ G A F +M +G + Y+S++
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ A L +M +G + +NS++D H
Sbjct: 334 HSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSH 371
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKE 120
Y IL + L R+ E L+ M + G P V Y+++I F FKE
Sbjct: 54 YNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF------------FKE 101
Query: 121 AEEKGMLR-----DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNG 174
+ ML ++ + ++ + V+K +EV+ +M + + + DC++ IV+G
Sbjct: 102 GDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV-MPDCMTYNSIVHG 160
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F A+ +++ S G P VTY S+++ C+ G ++A K+F M ++G
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPD 220
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ Y +++ Y G + + L+ M G PN ++++ L+
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 263
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI-- 171
A +F E +G + D+ + L+ +E ++ LE++ M + + DC V+
Sbjct: 36 ARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMAD---DGGDCPPDVVSY 91
Query: 172 ---VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+NGF K ++++ Q P VTY SII A C+ KA +V M +
Sbjct: 92 STVINGFFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 144
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKN 285
G + Y+S+V + +G+ ++A+ + KM+ G EP+V YNSLMD +GR
Sbjct: 145 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 204
Query: 286 LRQL 289
R++
Sbjct: 205 ARKI 208
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 129/280 (46%), Gaps = 3/280 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ Y++M AGI D Y ++ A + G E+ LF E E R D P + Y L
Sbjct: 473 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER--DCKPDE-YSYSSL 529
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ + R ++ D+ + I + +L+ + + + AE+ F E +K
Sbjct: 530 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 589
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ V +V +Y + MV K +++ MK + +N+S +++ +S+
Sbjct: 590 SLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCEN 649
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ S G P + +Y ++I AY R G +A ++F EM+ G VV Y+ V Y
Sbjct: 650 ILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYV 709
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+A+ LV M +GC+PN YNS+++ + R L
Sbjct: 710 SNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKL 749
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 21/268 (7%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
S G+ G A L R++ +G+L P V A+ I A + A L A
Sbjct: 115 SRGQPGAALAALHAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGP---- 170
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA-AVKV 187
D + LV + G + V M ++ + + V+++ +SK W V++
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVEL 230
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ G P + TY ++I+ R LY +A +VF EM+ GF+ V ++S++ +YGK
Sbjct: 231 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEK 291
R +A+ ++ +M+ GC P+V YNSL+ + + L Q +
Sbjct: 291 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVT 350
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNG 319
YTT+IS + A + D + Y+E NG
Sbjct: 351 YTTLISGLDRAGKIDAAIVEYDEMVRNG 378
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 133/320 (41%), Gaps = 64/320 (20%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYKILCDSLGKSGRAF- 77
D+G Y ++ AF + G A+F R +D + P+ Y ++ K +
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVF----RRMVDSGVQPAIV-TYNVVLHVYSKMAVPWK 225
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E+++ MKE G+ D Y +LI A K A ++F E + G D F L+
Sbjct: 226 EVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLL 285
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
+Y K R + A++V +++ GC
Sbjct: 286 DVY-----------------------------------GKARRHDEAIEVIQEMERVGCP 310
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P VTY S+I++Y + GL +A + EM+ KG VV Y+++++ + G+I A+
Sbjct: 311 PSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVE 370
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHG-RAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFR 316
+M GC+PN+ YN+L+ MHG R K F + ++EFR
Sbjct: 371 YDEMVRNGCKPNLCTYNALIKMHGVRGK--------------------FPEMMAVFDEFR 410
Query: 317 MNGGVIDRAMAGIMVGVFSK 336
G V D ++ VF +
Sbjct: 411 SAGFVPDIVTWNTLLAVFGQ 430
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 133/310 (42%), Gaps = 19/310 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G+ D Y ++ + ++ A +F E ++ + P + L D GK
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFE--PDKV-TFNSLLDVYGK 290
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ R E ++ ++M+ G Y SLI S+ ++ A L +E E KGM D+
Sbjct: 291 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVT 350
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ G ++ + + M + C ++ R + + V+++
Sbjct: 351 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFR 410
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G +P VT+ +++ + + GL S+ VF EM++ G+ Y S+++ Y + G
Sbjct: 411 SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 470
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVI 296
AM++ +M G P+V YN+++ R Q EK Y++++
Sbjct: 471 LAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 530
Query: 297 SAYNMAREFD 306
AY A+ D
Sbjct: 531 HAYANAKRLD 540
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/383 (18%), Positives = 154/383 (40%), Gaps = 54/383 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+ G+ D Y ++ + G K+ A +E + + + Y L
Sbjct: 337 QEMEVKGMKPDVVTYTTLISGLDRAG---KIDAAIVEYDEMVRNGCKPNLCTYNALIKMH 393
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G G+ E++ F + + G + D + +L+ F +FKE ++ G + +
Sbjct: 394 GVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 453
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ L+ Y G+ + +++ + M A + +++ ++ + A K++ +
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 513
Query: 191 LISQGCIPGQVTYASIINAYC-----------------------------------RIGL 215
+ + C P + +Y+S+++AY ++
Sbjct: 514 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNN 573
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
++AEK F+E++QK + ++MV++YGK +R ++++ MK + YNS
Sbjct: 574 LAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNS 633
Query: 276 LMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
LM M+ R + + E Y TVI AY + + ++E + +G
Sbjct: 634 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 693
Query: 320 GVIDRAMAGIMVGVFSKLSQIEE 342
D I V + S EE
Sbjct: 694 LKPDVVTYNIFVKSYVSNSMFEE 716
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 38/300 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++ +SAG V D + ++ F + G +V+ +F E +K P Y L S
Sbjct: 406 FDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM--KKAGYIPERD-TYVSLISS 462
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G ++ ++ M E GI D S Y +++ + A + AE+LF E EE+ D
Sbjct: 463 YSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 522
Query: 130 LEVFLKLVLMYIEEGMVE---------------------KTLEVVESMKNA--------- 159
+ L+ Y ++ KTL +V S N
Sbjct: 523 EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFL 582
Query: 160 ELNISDC-----ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
EL C + +V+ + K R K+ + TY S+++ Y R+G
Sbjct: 583 ELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLG 642
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
K E + E++ G +Y++++ YG+ G++++A RL ++MK G +P+V YN
Sbjct: 643 DCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYN 702
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 4/191 (2%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
K+ + + FLE ++ L ++ + GK+ ++ K MKE I
Sbjct: 570 KVNNLAEAEKAFLELRQKRCSL---DINVLNAMVSIYGKNRMVRKVEKILSLMKESAINL 626
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ Y SL+ ++ + + + E + E + G+ D + ++ Y +G +++ +
Sbjct: 627 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 686
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
MK + L + V + + A+++ +++QGC P + TY SI+ YCR
Sbjct: 687 SEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRN 746
Query: 214 GLYSKAEKVFI 224
G + A K+F+
Sbjct: 747 GKLTDA-KIFV 756
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 3/250 (1%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
++ K G+ + L+ + S + D +P++ Y L D L KSGR +E + F M
Sbjct: 863 VISGLVKAGNVDDALDLYYDLMSDR-DFSPTAC-TYGPLIDGLSKSGRLYEAKQLFEGMS 920
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+ G + ++Y LI F E A LFK ++G+ DL+ + LV G V+
Sbjct: 921 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 980
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSK-RRAYWAAVKVYEQLISQGCIPGQVTYASI 206
+ L +K + LN +I+NG K R A V E S+G P TY S+
Sbjct: 981 EGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSL 1040
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I G+ +A K++ E+Q+ G + V +++++ Y +G+ A + M G
Sbjct: 1041 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1100
Query: 267 EPNVWIYNSL 276
PN Y L
Sbjct: 1101 SPNTGTYEQL 1110
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 125/304 (41%), Gaps = 38/304 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KMK+ D Y +++ F D + V + E E D + IL D+
Sbjct: 318 FAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEK---DGHVPDVVTFTILVDA 374
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G E M+++GIL + Y +LIC + + A E+F E G+
Sbjct: 375 LCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPT 434
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCV----------------- 170
++ + Y + G LE E MK + NI C + +
Sbjct: 435 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 494
Query: 171 ----------------IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
++ +SK A+K+ +++ C P + S+IN +
Sbjct: 495 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKAD 554
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A K+F+ M++ VV Y++++A GK G+I++A+ L M KGC PN +N
Sbjct: 555 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 614
Query: 275 SLMD 278
+L D
Sbjct: 615 TLFD 618
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 121/258 (46%), Gaps = 7/258 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYK 64
L ++ M+S G+ + Y ++ + K GDS F + +++ + ++ + +Y
Sbjct: 420 LEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY- 478
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
SL K+GR E + F +K+ G++ D Y ++ ++ + E+ A +L E E
Sbjct: 479 ----SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVEN 534
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D+ V L+ + V++ ++ MK +L + ++ G K A
Sbjct: 535 CCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 594
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++++E ++ +GC P +T+ ++ + C+ + A K+ +M G V Y++++
Sbjct: 595 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFG 654
Query: 245 YGKTGRIRDAMRLVAKMK 262
K G++++AM +MK
Sbjct: 655 LVKNGQVKEAMCFFHQMK 672
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 144/351 (41%), Gaps = 27/351 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK-LDLTPSSTHMYKILCDSL 70
KM+ G VL++ Y ++ K + +E R LD S Y L L
Sbjct: 180 KMREFGFVLNAYSYNGLIHLLLK----SRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGL 235
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLIC--SFASIAEVKVAEELFKEAEEKGMLR 128
GK ++ ++M+ G+ P+VY IC ++ A E+ K +++G
Sbjct: 236 GKRRDIESVMGLLKEMETLGL--KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGP 293
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ ++ EV MK +++ FS R + + +
Sbjct: 294 DVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFW 353
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ G +P VT+ +++A C+ G + +A M+ +G + Y++++ +
Sbjct: 354 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRV 413
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----LRQLEKYTTVISAYNM--- 301
R+ DA+ + M+ G +P + Y +D +G++ + L EK T A N+
Sbjct: 414 HRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 473
Query: 302 ----------AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
R+ + FY + G V D +M+ +SK+ +I+E
Sbjct: 474 NASLYSLAKAGRDREAKQIFYG-LKDIGLVPDSVTYNMMMKCYSKVGEIDE 523
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
+E M G + Y ++ F K G+++ ALF + E + DL Y +L
Sbjct: 916 FEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL-----KTYSVLV 970
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE-KGM 126
D L GR E L +FR++KE G+ D Y +I ++ A LF E ++ +G+
Sbjct: 971 DCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGI 1030
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
DL + L+L GMVE+ ++ ++ A L + ++ G+S A
Sbjct: 1031 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYA 1090
Query: 187 VYEQLISQGCIPGQVTYASIIN 208
VY+ +++ G P TY + N
Sbjct: 1091 VYQTMVTGGFSPNTGTYEQLPN 1112
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 106/240 (44%), Gaps = 4/240 (1%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F +K G + D + Y L+ ++ ++ E++KE + ++ ++
Sbjct: 810 FLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVK 869
Query: 143 EGMVEKTLEVV-ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
G V+ L++ + M + + + + C +++G SK + A +++E + GC P
Sbjct: 870 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCA 929
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
Y +IN + + G A +F M ++G + YS +V GR+ + + ++
Sbjct: 930 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFREL 989
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
K G P+V YN +++ G+ +LE+ + + +R + YN +N G+
Sbjct: 990 KESGLNPDVVCYNLIINGLGK---FHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGI 1046
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 105/255 (41%), Gaps = 43/255 (16%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D+ GKSG+ E+ + +++M + + +I V A +L+ +
Sbjct: 825 YNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLM 884
Query: 123 EKGMLRDLE----VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
RD + L+ + G + + ++ E M + + I +++NGF K
Sbjct: 885 SD---RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKA 941
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
AA ++++++ +G P TY+ +++ C +G + F E+++ G + VV Y
Sbjct: 942 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCY 1001
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPK---------------------------------- 264
+ ++ GK R+ +A+ L +MK
Sbjct: 1002 NLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1061
Query: 265 --GCEPNVWIYNSLM 277
G EPNV+ +N+L+
Sbjct: 1062 RAGLEPNVFTFNALI 1076
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 121/306 (39%), Gaps = 38/306 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ Y +M G Y +M K D E V L E E+ L L P+ + + I
Sbjct: 210 MEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMET--LGLKPN-VYTFTIC 266
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF-------- 118
LG++G+ E + + M ++G D Y LI + + ++ A+E+F
Sbjct: 267 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRH 326
Query: 119 ---------------------------KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
E E+ G + D+ F LV + G +
Sbjct: 327 KPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFA 386
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
++ M++ + + ++ G + A+++++ + S G P TY I+ Y
Sbjct: 387 KLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYG 446
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ G A + F +M+ KG +VA ++ + K GR R+A ++ +K G P+
Sbjct: 447 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 506
Query: 272 IYNSLM 277
YN +M
Sbjct: 507 TYNMMM 512
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 138/359 (38%), Gaps = 75/359 (20%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-----CES----------------- 50
+K G+V DS Y +M+ + K+G+ ++ L E CE
Sbjct: 496 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADR 555
Query: 51 -----------RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA 99
+++ L P+ Y L LGK+G+ E ++ F M +KG + +
Sbjct: 556 VDEAWKMFMRMKEMKLKPTVV-TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 614
Query: 100 SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA 159
+L EV +A ++ + + G + D+ + ++ ++ G V++ + MK
Sbjct: 615 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-- 672
Query: 160 ELNISDCIS-CVIVNGFSKR----------------------RAYW-------------- 182
+L D ++ C ++ G K +W
Sbjct: 673 KLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGID 732
Query: 183 AAVKVYEQLISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK-GFDKCVVAYSS 240
AV E+L++ G C G II + S A +F + + G + Y+
Sbjct: 733 NAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNL 792
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
++ + I A + ++K GC P+V YN L+D +G++ + +L + +SA+
Sbjct: 793 LIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAH 851
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 85/225 (37%), Gaps = 52/225 (23%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE---- 225
+++ G + A V+ Q+ + GCIP TY +++AY + G + +++ E
Sbjct: 792 LLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAH 851
Query: 226 --------------------------------MQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
M + F Y ++ K+GR+ +
Sbjct: 852 ECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 911
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRA---------------KNLR-QLEKYTTVIS 297
A +L M GC PN IYN L++ G+A + +R L+ Y+ ++
Sbjct: 912 AKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 971
Query: 298 AYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
M D + ++ E + +G D +++ K ++EE
Sbjct: 972 CLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEE 1016
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 108/280 (38%), Gaps = 40/280 (14%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P +T + L D L K+ LK M + G + D Y ++I +VK A
Sbjct: 607 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 666
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN------------------ 158
F + + K + D L+ ++ G++E +++ +
Sbjct: 667 FFHQMK-KLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSI 725
Query: 159 -AELNISDCISC---VIVNGFS---------------KRRAYWAAVKVYEQLISQ-GCIP 198
AE I + +S ++ NG K A ++E+ G P
Sbjct: 726 LAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQP 785
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
TY +I + A+ VF++++ G V Y+ ++ YGK+G+I + +
Sbjct: 786 KLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIY 845
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKYTTVIS 297
+M CEPN +N ++ +A N+ L+ Y ++S
Sbjct: 846 KEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMS 885
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 39/151 (25%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LHY+ ++K +G+ D CY ++
Sbjct: 983 LHYFRELKESGLNPDVVCY--------------------------------------NLI 1004
Query: 67 CDSLGKSGRAFEILKFFRDMKE-KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+ LGK R E L F +MK+ +GI D Y SLI + V+ A +++ E + G
Sbjct: 1005 INGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1064
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
+ ++ F L+ Y G E V ++M
Sbjct: 1065 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1095
>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
Length = 595
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 5/280 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + +MK G+ D Y ++ + G+ + +F E K ++ P
Sbjct: 120 NMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEE--MLKANIEPDIV- 176
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL KSG E+ M ++G+ + Y I F + AE LF
Sbjct: 177 TYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVV 236
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-IVNGFSKRRA 180
EEKG+ ++ +V Y+ G + + + + N+ D SC ++N +
Sbjct: 237 EEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVAR-QGNLVDHFSCSKLINDLCRVGN 295
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A V + ++ +P ++Y+ +I+ YC+ G KA F +M Q+G V+ Y+
Sbjct: 296 VQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTI 355
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
++ Y K GR+++A +L +M G +P+V Y L+D H
Sbjct: 356 LMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGH 395
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 149/350 (42%), Gaps = 54/350 (15%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+YE M S GI + +++ F K+G + +V A FL+ + L L +Y I D
Sbjct: 57 HYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKV---IYNIAMD 113
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ K+G E +K +MK G+ D Y LI + E++ A+++F+E + +
Sbjct: 114 TYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEP 173
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L + + G+V + ++++ M +
Sbjct: 174 DIVTYNILASGFCKSGLVMEVFDLLDRMAD------------------------------ 203
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
QG P +TY I +CR G S+AE +F +++KG D V YSSMV Y +
Sbjct: 204 -----QGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLS 258
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR--------QLEK--------Y 292
G A L ++ +G + + + L++ R N++ LE Y
Sbjct: 259 GWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISY 318
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +IS Y + D ++++ G ID + I++ + K +++E
Sbjct: 319 SKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQE 368
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 105/234 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y ++ D L K R E K + +G D Y+ LI S+ + + A + ++
Sbjct: 3 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMV 62
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ + + L+ + + GM + + K++ L++ I + ++ + K
Sbjct: 63 SHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMN 122
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AVK+ ++ G P ++ Y +IN YC G A++VF EM + + +V Y+ +
Sbjct: 123 EAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILA 182
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
+ + K+G + + L+ +M +G EPN Y + R NL + E V+
Sbjct: 183 SGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVV 236
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 22/229 (9%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M +V D Y +++ + + GD +K F + R L + +Y IL + K
Sbjct: 306 MLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSI---DVIVYTILMNGYCK 362
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+GR E + F M GI D Y L+ +E ++ E G+ ++
Sbjct: 363 AGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHL--------KETLQQGWE-GIAKERRS 413
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
FL + +++ SMK+ ++ V+++G K A +++++++
Sbjct: 414 FL----------LRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEML 463
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+G P Y ++IN YC G SKAE + EM KG + + +S +
Sbjct: 464 QKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSEV 512
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M E ++ D Y+ LI + ++ A F + ++G+ D+ V+ L+ Y + G
Sbjct: 306 MLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGR 365
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSK-------------RRAYWAAV---KVYE 189
+++ ++ M N + V+++G K RR++ K+
Sbjct: 366 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 425
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ P Y +I+ C+ +A ++F EM QKG AY++++ Y G
Sbjct: 426 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 485
Query: 250 RIRDAMRLVAKMKPKGCEPN 269
I A L+ +M KG EP+
Sbjct: 486 EISKAEDLLQEMIDKGIEPD 505
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 29/183 (15%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ M G+ +D Y +M + K G ++ LF++ + L + P Y +L D
Sbjct: 337 WFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTN--LGIKPDVI-AYTVLLD 393
Query: 69 S------------LGKSGRAFEIL----KFFRDMKEKGILEDPSVYASLICSFASIAEVK 112
+ K R+F + K MK+ I D Y LI +
Sbjct: 394 GHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLV 453
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN----------AELN 162
A ELF E +KG+ D + L+ Y +G + K ++++ M + +E+N
Sbjct: 454 EARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSEVN 513
Query: 163 ISD 165
I+D
Sbjct: 514 IAD 516
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ ++ Y ++ + G + +AL E S+K+ P Y IL D L
Sbjct: 122 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM--VPDG-FTYSILFDGL 178
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G + +L F + G+ + L+ +V +AEE+ + G++
Sbjct: 179 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 238
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
++ L+ Y + G +E MK+ + ++NG K A + +
Sbjct: 239 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 298
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P T+ ++I+AY R G K V EMQ+ G VV+Y S+V + K G+
Sbjct: 299 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 358
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
I +A+ ++ M K PN +YN+++D
Sbjct: 359 IPEAVAILDDMFHKDVLPNAQVYNAIID 386
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 122/276 (44%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MKS I D Y ++ K L +E + ++ T + L D+
Sbjct: 261 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT---VETFNTLIDA 317
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G++G+ + +M+E G+ + Y S++ +F ++ A + + K +L +
Sbjct: 318 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 377
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+V+ ++ Y+E G ++ +VE MK+ ++ S +++ G + A ++
Sbjct: 378 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 437
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L + IP V+Y ++I+A C G KA + M + G V Y +++ G G
Sbjct: 438 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 497
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
R+ + L KM P+ I+N +++ + + N
Sbjct: 498 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 533
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 125/288 (43%), Gaps = 41/288 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M ++ + Y +++ K GD E A L + L P++ Y +L
Sbjct: 86 FDEMTERAVLPNHITYNTMIDGHIKGGDLE--AGFRLRDQMVCHGLKPNAI-TYNVLLSG 142
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++GR E +M + ++ D Y+ L + L + + K ML
Sbjct: 143 LCRAGRMGETSALLDEMASQKMVPDGFTYSILF------------DGLSRNGDSKAML-- 188
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+F K Y++ G+ I D +++NG K A +V +
Sbjct: 189 -SLFGK----YLKNGVT----------------IGDYTCSILLNGLCKDGKVSIAEEVLQ 227
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L++ G +P +V Y ++IN YC+ G A F +M+ + + Y++++ K
Sbjct: 228 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 287
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
RI +A L+ +M+ G P V +N+L+D +GR QLEK V+S
Sbjct: 288 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG---QLEKCFIVLS 332
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 17/298 (5%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L P+ +Y L + ++G F MK + I D Y +LI + A
Sbjct: 234 LVPTRV-IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 292
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
++L E ++ G+ +E F L+ Y G +EK V+ M+ L + IVN
Sbjct: 293 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 352
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K AV + + + + +P Y +II+AY G +A + +M+ G
Sbjct: 353 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 412
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HG---RAKNLRQ 288
+V Y+ ++ +I +A ++ + P+ YN+L+ G +A +L+Q
Sbjct: 413 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 472
Query: 289 ----------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+ Y +IS A + Y + N V A+ IMV +SK
Sbjct: 473 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 530
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 90/218 (41%), Gaps = 3/218 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ G+ + Y I+ AF K G + A+ + + D+ P++ +Y + D+
Sbjct: 333 EMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK--DVLPNA-QVYNAIIDAYV 389
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G + MK GI Y LI + +++ AEE+ ++ D
Sbjct: 390 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 449
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ G ++K L++ + M + + +++G +Y+++
Sbjct: 450 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 509
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+ +P + ++ AY + G KAE + EM QK
Sbjct: 510 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 139/313 (44%), Gaps = 52/313 (16%)
Query: 12 KMKSAGIVLD----SGC------YCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSS 59
++K A +VL+ +GC Y ++++ + +GD +K + R +L +
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T + K CDS G + A IL RD G D Y LIC F I++++ A LF
Sbjct: 465 T-IIKGYCDS-GNTTSALRILDLMRD---GGCKPDEWSYTELICGFCKISKMESAFGLFN 519
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E + G+ + + L+ Y ++ ++ ++E MK + + V+++G +K+
Sbjct: 520 EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQN 579
Query: 180 AYWAA-----------------------------------VKVYEQLISQGCIPGQVTYA 204
+ A ++++ ++I QGC+P +TY+
Sbjct: 580 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYS 639
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+I A + G +AE +F E+++ G + Y M+ Y +G++ A + +M
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699
Query: 265 GCEPNVWIYNSLM 277
GC+P +W Y L+
Sbjct: 700 GCQPTLWTYGVLI 712
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+T Y L + L SGR E R+M GIL I + + + A L
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F + + KG ++ + L+ G+++ + + M + + ++N +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
R A V + GC P VTY +I YC +G KA V M Q+G +V
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y++++ Y +G A+R++ M+ GC+P+ W Y L+
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 97/217 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L + G ++ + M +G+ + +Y ++I + V AE + K+
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 242
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E M D + ++L + + ++ L+V M + ++NG
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 302
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + ++I G +P T I A C +G Y A ++F++M+ KG + V Y++++
Sbjct: 303 EAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALI 362
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ +G ++ A+ L +M G PN YN+L+++
Sbjct: 363 SGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+ F + + G+ Y++L+ + + + + +G+ +L ++ ++
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
++G V +++ + +E++ ++ G ++ +A++V+ Q+ +GC P
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY+++IN C G ++A + EM G + + G DA RL
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344
Query: 260 KMKPKGCEPNVWIYNSLM 277
MK KGCEPNV+ Y +L+
Sbjct: 345 DMKNKGCEPNVYTYTALI 362
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 113/281 (40%), Gaps = 38/281 (13%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
AF +L M G + Y +I + + + K A + ++G +L +
Sbjct: 409 AFVVLNL---MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
++ Y + G L +++ M++ + ++ GF K +A ++ +++ G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 196 CIPGQVTYASIINAYCR------------------------------IGL-----YSKAE 220
P +VTY ++I+ YC+ GL +S AE
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
++ M ++G VV Y++M+ K G A+ + KM +GC PN+ Y+SL+
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Query: 281 GRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
G+ + + E + + + + VK + M+G V
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 19/228 (8%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D L K+G L+ F M E+G L + Y+SLI + +V+ AE LF E E
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G++ D ++K++ YI G VE + M A + V++ G + Y
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL--KNEYL 720
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK--GFDK--CVVAY 238
A + L +P C G + + M K D V
Sbjct: 721 LADQRLAAL--PDVVPN-----------CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+++V+ GR +A L+ M +G P+ YNSL+ R +N+
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNV 815
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 33 YKIGDSEKVAALFLECESRKLDLTPS-STHMYKILCDSLGKSGRAFEILKFFRDMKEKGI 91
Y+ D + V+ + ++ +L P S + L +L +GR FE + M +G+
Sbjct: 740 YQTTDQDAVSVM----SAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGL 795
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D Y SL+CS + V +A +FK +G L + +L+ + ++
Sbjct: 796 CPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARI 855
Query: 152 VVESMKNAELNISDCISCVIVNGF 175
E+M N D + V+++G
Sbjct: 856 TFENMLMRTWNPDDVVQAVLIDGL 879
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 125/269 (46%), Gaps = 3/269 (1%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G+ YC ++ K+ + E V A ++ E +L P+ + L + L + G+
Sbjct: 291 GLTASEVTYCTLVLGLCKVQEFE-VGAGVMD-EMIELGFVPTEAALSS-LVEGLRRKGKV 347
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
+ +K+ G + VY +LI S + AE LFKE EKG+ + + L
Sbjct: 348 VDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSIL 407
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ + G ++ + + M A + I+ ++NG K AAV ++++I +G
Sbjct: 408 IDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGL 467
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P V+Y S+I+ YC G +A +++ EM KG ++++++ + R+ DA R
Sbjct: 468 KPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFR 527
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
L +M + PN YN +++ H + N
Sbjct: 528 LFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 129/312 (41%), Gaps = 40/312 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ ++ S GI D Y ++ +F ++ + K + ES L++ +Y +L
Sbjct: 216 FGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVV-----VYNVLIHG 270
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+ R +E ++ + +KG+ Y +L+ + E +V + E E G +
Sbjct: 271 LCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPT 330
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMK-----------NAELN---------------- 162
LV +G V ++V +K NA +N
Sbjct: 331 EAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFK 390
Query: 163 --------ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
+D ++++ F +R A+ ++I G Y S+IN +C++G
Sbjct: 391 EMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLG 450
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
S A F EM KG VV+Y+S+++ Y G++ +A RL +M KG PN + +
Sbjct: 451 NLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFT 510
Query: 275 SLMDMHGRAKNL 286
+L+ RA +
Sbjct: 511 TLISALFRANRM 522
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 4/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M ++ + Y ++E K G++ K L + + L P T+ Y+ L S
Sbjct: 529 FDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQK--GLVPD-TYTYRPLISS 585
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L +GR E KF D+ + + Y++L+ + ++ A + +E ++G+ D
Sbjct: 586 LCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMD 645
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + L+ I+E ++++M + L I +++G+SK + A +++
Sbjct: 646 LVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWD 705
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I +GC P VTY ++IN C+ GL KAE ++ EM V Y + + G
Sbjct: 706 IMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREG 765
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ A++L M KG N YN L+
Sbjct: 766 SMEKAVQLHNDML-KGLLANTVSYNILV 792
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ + Y L + K G + FF +M +KG+ Y SLI + + ++ A L+
Sbjct: 435 TVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLY 494
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E KG+ + F L+ + + + M + ++ V++ G K
Sbjct: 495 HEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKE 554
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A ++ Q++ +G +P TY +I++ C G +A+K ++ ++ F + Y
Sbjct: 555 GNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCY 614
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
S+++ Y K GR+RDA+ + +M +G + ++ Y L+D
Sbjct: 615 SALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLID 654
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 141/346 (40%), Gaps = 31/346 (8%)
Query: 3 SQSKLH----YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS 58
++ KLH Y +M GI ++ + ++ A ++ LF E + ++ P+
Sbjct: 483 NKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQ--NMMPN 540
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
Y ++ + K G + + M +KG++ D Y LI S S V A++
Sbjct: 541 EV-TYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFI 599
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ + + + L+ Y +EG + L V M +++ V+++G K
Sbjct: 600 DDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKE 659
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A + + + Q P +V Y S+I+ Y + G KA ++ M +G +V Y
Sbjct: 660 QDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTY 719
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
++++ K G + A L +M PN Y +D
Sbjct: 720 TTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLD-------------------- 759
Query: 299 YNMAREFDM--CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++ARE M V+ +N+ + G + + I+V F KL ++EE
Sbjct: 760 -HLAREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEE 803
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 115/274 (41%), Gaps = 8/274 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G+ +D CY +++ K D+ V L ++L P +Y + D
Sbjct: 636 EMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL--RPDKV-IYTSMIDGYS 692
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G + + M ++G + Y +LI + AE L+KE +
Sbjct: 693 KAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHV 752
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQ 190
+ + EG +EK +++ M L ++ +S ++V GF K A K+ ++
Sbjct: 753 TYCCFLDHLAREGSMEKAVQLHNDMLKGLL--ANTVSYNILVRGFCKLGRVEEATKLLDE 810
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I P +TY++II CR G A + + M KG +AY+ ++ G
Sbjct: 811 MIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGE 870
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+ A L M +G +PN + SL HG ++
Sbjct: 871 LGKAFELRDDMIRRGVKPNQATHKSL--SHGASR 902
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F L+ Y++E + ++ + M+ EL ++NG +K R + ++ +++
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G P Y ++I ++C + ++KA+++ M+ + VV Y+ ++ K R+
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLN--VVVYNVLIHGLCKNKRVW 278
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLM 277
+A+ + + KG + Y +L+
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLV 303
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 118/254 (46%), Gaps = 3/254 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ K GD++ L + E+ K++ + ++ + DSL K + L F+
Sbjct: 190 YGVVVNGLCKRGDTDLALNLLNKMEAAKIE---ADVVIFNTIIDSLCKYRHVDDALNLFK 246
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M+ KGI + Y+SLI S A +L + EK + +L F L+ +++EG
Sbjct: 247 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 306
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ ++ + M ++ +VNGF A +++E ++S+ C P VTY
Sbjct: 307 KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 366
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++I +C+ ++F EM +G V Y++++ G +A ++ +M
Sbjct: 367 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 426
Query: 265 GCEPNVWIYNSLMD 278
G P++ Y+ L+D
Sbjct: 427 GVPPDIMTYSILLD 440
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 125/272 (45%), Gaps = 5/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ +++M++ GI + Y ++ G + L + +K++ + + L
Sbjct: 242 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN---PNLVTFNAL 298
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K G+ E K + DM ++ I D Y SL+ F + A+++F+ K
Sbjct: 299 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 358
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAV 185
D+ + L+ + + VE E+ M + L + D ++ ++ G A
Sbjct: 359 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL-VGDTVTYTTLIQGLFHDGDCDNAQ 417
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
KV++Q++S G P +TY+ +++ C G KA +VF MQ+ + Y++M+
Sbjct: 418 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 477
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++ D L + KG +PNV YN+++
Sbjct: 478 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 509
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 149/341 (43%), Gaps = 20/341 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
EKM+ IV Y ++ F + S+ AL L + KL PS + +L +
Sbjct: 71 EKMQRLEIVHGLYTYNILINCFCR--RSQISLALALLGKMMKLGYEPSIVTLSSLL-NGY 127
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
R + + M E G D + +LI + A L ++G +L
Sbjct: 128 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 187
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V + G + L ++ M+ A++ I I++ K R A+ ++++
Sbjct: 188 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 247
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ ++G P VTY+S+I+ C G +S A ++ +M +K + +V +++++ + K G+
Sbjct: 248 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 307
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEK-------------YTT 294
+A +L M + +P+++ YNSL++ MH R +Q+ + Y T
Sbjct: 308 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 367
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV-GVF 334
+I + ++ + + + E G V D ++ G+F
Sbjct: 368 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 408
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 35/220 (15%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L KS R + + FR+M +G++ D Y +LI + A+++FK+
Sbjct: 365 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 424
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ + L+ G +EK LEV + M+ +E+ +
Sbjct: 425 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD------------------ 466
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+Y Y ++I C+ G +F + KG VV Y++M+
Sbjct: 467 ----IY-------------IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 509
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+ +++A L+ KMK G PN YN+L+ H R
Sbjct: 510 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 549
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 7/244 (2%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
+SR L PS K+L ++ K + ++ M+ I+ Y LI F
Sbjct: 40 KSRPL---PSIVEFNKLL-SAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRR 95
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+++ +A L + + G + L+ Y + + +V+ M
Sbjct: 96 SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 155
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++G AV + ++++ +GC P VTY ++N C+ G A + +M+
Sbjct: 156 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA 215
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKN 285
+ VV +++++ K + DA+ L +M+ KG PNV Y+SL+ +GR +
Sbjct: 216 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 275
Query: 286 LRQL 289
QL
Sbjct: 276 ASQL 279
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
+++M S G+ D Y +++ G EK +F ++ KLD+ ++Y +
Sbjct: 420 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI-----YIYTTMI 474
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ + K+G+ + F + KG+ + Y ++I S ++ A L K+ +E G L
Sbjct: 475 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 534
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+ + L+ ++ +G + E++ M++
Sbjct: 535 PNSGTYNTLIRAHLRDGDKAASAELIREMRS 565
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 38/273 (13%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E ++ + ++ Y ++ K+G S + LF S Y + +SL
Sbjct: 395 EVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFH---DGGDRDAYISMLESL 451
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G+ E ++ + EKGI D +Y +++ + + +V +L+++ ++ G D+
Sbjct: 452 CRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDI 511
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ G V++ AV+V+E+
Sbjct: 512 FTYNILISSLGRVGKVKE-----------------------------------AVEVFEE 536
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L S C P ++Y S+IN + G +A F+EMQ KG + VV YS+++ +GKT +
Sbjct: 537 LESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDK 596
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ A L +M +GC PN+ YN L+D RA
Sbjct: 597 VEMARSLFDRMITQGCCPNIVTYNILLDCLERA 629
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 102/230 (44%), Gaps = 3/230 (1%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D Y ++E+ + G + + L + + + + T MY + +LGK + +
Sbjct: 440 DRDAYISMLESLCRGGKTVEAIELLSKVHEKGIS---TDTMMYNTVLSTLGKLKQVSHLH 496
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ MK+ G D Y LI S + +VK A E+F+E E D+ + L+
Sbjct: 497 DLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCL 556
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G V++ M++ LN ++ F K A +++++I+QGC P
Sbjct: 557 GKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNI 616
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
VTY +++ R G ++ ++ +++++G + Y+ + + + R
Sbjct: 617 VTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDRLQSGSNR 666
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 129/288 (44%), Gaps = 8/288 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
+S + Y +M S G LD Y +++A K ++ +F + KL +
Sbjct: 249 DSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVF---KDMKLKHCNPDEY 305
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y I+ GK GRA E L F +M KG + Y ++I + + V A LF
Sbjct: 306 TYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNM 365
Query: 122 EEKGMLRDLEVFLKLVL-MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
K R E ++L + + EG + + EV+E + N +N S I +V SK
Sbjct: 366 I-KNNCRPNEFTYSIILNVLVAEGQLGRLDEVLE-VSNKFINKS--IYAYLVRTLSKLGH 421
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +++ + S + Y S++ + CR G +A ++ ++ +KG + Y++
Sbjct: 422 SSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNT 481
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+++ GK ++ L KMK G P+++ YN L+ GR +++
Sbjct: 482 VLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKE 529
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 5 SKLH-YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
S LH YEKMK G D Y ++ + ++G ++ +F E ES D P Y
Sbjct: 493 SHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESS--DCKPDIIS-Y 549
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + LGK+G E F +M++KG+ D Y++LI F +V++A LF
Sbjct: 550 NSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMIT 609
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
+G ++ + L+ G +T+++ ++ L D I+ I++
Sbjct: 610 QGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLT-PDSITYAILD 658
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 41/81 (50%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY ++ A+ R +A V++EM G+ + AY+ ++ K ++ + ++ M
Sbjct: 236 TYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDM 295
Query: 262 KPKGCEPNVWIYNSLMDMHGR 282
K K C P+ + Y ++ M G+
Sbjct: 296 KLKHCNPDEYTYTIMIRMTGK 316
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 38/273 (13%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E ++ + ++ Y ++ K+G S + LF S Y + +SL
Sbjct: 400 EVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFH---DGGDRDAYISMLESL 456
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G+ E ++ + EKGI D +Y +++ + + +V +L+++ ++ G D+
Sbjct: 457 CRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDI 516
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ G V++ AV+V+E+
Sbjct: 517 FTYNILISSLGRVGKVKE-----------------------------------AVEVFEE 541
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L S C P ++Y S+IN + G +A F+EMQ KG + VV YS+++ +GKT +
Sbjct: 542 LESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDK 601
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ A L +M +GC PN+ YN L+D RA
Sbjct: 602 VEMARSLFDRMITQGCCPNIVTYNILLDCLERA 634
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 102/230 (44%), Gaps = 3/230 (1%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D Y ++E+ + G + + L + + + + T MY + +LGK + +
Sbjct: 445 DRDAYISMLESLCRGGKTVEAIELLSKVHEKGIS---TDTMMYNTVLSTLGKLKQVSHLH 501
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ MK+ G D Y LI S + +VK A E+F+E E D+ + L+
Sbjct: 502 DLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCL 561
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G V++ M++ LN ++ F K A +++++I+QGC P
Sbjct: 562 GKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNI 621
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
VTY +++ R G ++ ++ +++++G + Y+ + + + R
Sbjct: 622 VTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDRLQSGSNR 671
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 129/288 (44%), Gaps = 8/288 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
+S + Y +M S G LD Y +++A K ++ +F + KL +
Sbjct: 254 DSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVF---KDMKLKHCNPDEY 310
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y I+ GK GRA E L F +M KG + Y ++I + + V A LF
Sbjct: 311 TYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNM 370
Query: 122 EEKGMLRDLEVFLKLVL-MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
K R E ++L + + EG + + EV+E + N +N S I +V SK
Sbjct: 371 I-KNNCRPNEFTYSIILNVLVAEGQLGRLDEVLE-VSNKFINKS--IYAYLVRTLSKLGH 426
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +++ + S + Y S++ + CR G +A ++ ++ +KG + Y++
Sbjct: 427 SSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNT 486
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+++ GK ++ L KMK G P+++ YN L+ GR +++
Sbjct: 487 VLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKE 534
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 5 SKLH-YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
S LH YEKMK G D Y ++ + ++G ++ +F E ES D P Y
Sbjct: 498 SHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESS--DCKPDIIS-Y 554
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + LGK+G E F +M++KG+ D Y++LI F +V++A LF
Sbjct: 555 NSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMIT 614
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
+G ++ + L+ G +T+++ ++ L D I+ I++
Sbjct: 615 QGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLT-PDSITYAILD 663
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 120/304 (39%), Gaps = 58/304 (19%)
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
S RAF + + +M KG D Y L+ + A ++ + ++FK+ + K D
Sbjct: 255 SDRAFNV---YMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYT 311
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ M + G E++L + E M + ++ SK A+ ++ +I
Sbjct: 312 YTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMI 371
Query: 193 SQGCIPGQVTYASIIN---------------------------AY-----CRIGLYSKAE 220
C P + TY+ I+N AY ++G S+A
Sbjct: 372 KNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAH 431
Query: 221 KVFIEMQ--QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++F M G D+ AY SM+ + G+ +A+ L++K+ KG + +YN+++
Sbjct: 432 RLFCNMWSFHDGGDR--DAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLS 489
Query: 279 MHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLS 338
G+ K + L Y + + +G D I++ ++
Sbjct: 490 TLGKLKQVSHLH-------------------DLYEKMKQDGPFPDIFTYNILISSLGRVG 530
Query: 339 QIEE 342
+++E
Sbjct: 531 KVKE 534
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY ++ A+ R +A V++EM KG+ + AY+ ++ K ++ + ++ M
Sbjct: 241 TYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDM 300
Query: 262 KPKGCEPNVWIYNSLMDMHGR 282
K K C P+ + Y ++ M G+
Sbjct: 301 KLKHCNPDEYTYTIMIRMTGK 321
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++K+ + G L Y ++ KIG++ L E + + P+ +Y ++
Sbjct: 148 LRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIE--RWSIRPNVV-IYSMI 204
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K E + +M KGI D Y+ L+ F + ++ A +L E + +
Sbjct: 205 IDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENI 264
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + LV +EG V++ V+ M A +N+ + +++G+ A +
Sbjct: 265 NPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKR 324
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+ + G P Y+ +IN C+I +A +F E+ QK V Y+S++
Sbjct: 325 VFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLC 384
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+GRI L +M +G P+V YN+L+D
Sbjct: 385 KSGRISYVWDLFDEMLDRGQPPDVITYNNLID 416
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 110/253 (43%), Gaps = 3/253 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M A + LD Y +M+ + + + +F ++ +TP H Y I+ + L K
Sbjct: 294 MVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYT--MTQMGVTPD-VHCYSIMINGLCK 350
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
R E L F ++ +K ++ D Y SLI + +LF E ++G D+
Sbjct: 351 IKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVIT 410
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + G +++ + + MK+ + + ++++G K A++ ++ L+
Sbjct: 411 YNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLL 470
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
++G TY +IN C+ GL +A + M+ G V + M+ +
Sbjct: 471 TKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDEND 530
Query: 253 DAMRLVAKMKPKG 265
A +LV +M +G
Sbjct: 531 KAEKLVREMIARG 543
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 124/303 (40%), Gaps = 17/303 (5%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP + H KIL SL R + ++ M+ + D +I F +V +A
Sbjct: 55 TPHTFHFNKILI-SLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAF 113
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ + G + L+ EG V++ L + + +S +++NG
Sbjct: 114 SGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGV 173
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K AA+++ ++ P V Y+ II+ C+ L +A ++ EM KG V
Sbjct: 174 CKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDV 233
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---- 291
V YS +V+ + G++ A+ L+ +M + P+++ Y L+D + +++ E
Sbjct: 234 VTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAV 293
Query: 292 ------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
Y+T++ Y + E + + + G D IM+ K+ +
Sbjct: 294 MVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKR 353
Query: 340 IEE 342
++E
Sbjct: 354 VDE 356
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 129/280 (46%), Gaps = 3/280 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ Y++M AGI D Y ++ A + G E+ LF E E R D P + Y L
Sbjct: 473 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER--DCKPDE-YSYSSL 529
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ + R ++ D+ + I + +L+ + + + AE+ F E +K
Sbjct: 530 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 589
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ V +V +Y + MV K +++ MK + +N+S +++ +S+
Sbjct: 590 SLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCEN 649
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ S G P + +Y ++I AY R G +A ++F EM+ G VV Y+ V Y
Sbjct: 650 ILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYV 709
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+A+ LV M +GC+PN YNS+++ + R L
Sbjct: 710 SNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKL 749
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 21/268 (7%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
S G+ G A L R++ +G+L P V A+ I A + A L A
Sbjct: 115 SRGQPGAALAALHAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGP---- 170
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA-AVKV 187
D + LV + G + V M ++ + + V+++ +SK W V++
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVEL 230
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ G P + TY ++I+ R LY +A +VF EM+ GF+ V ++S++ +YGK
Sbjct: 231 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEK 291
R +A+ ++ +M+ GC P+V YNSL+ + + L Q +
Sbjct: 291 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVT 350
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNG 319
YTT+IS + A + D + Y+E NG
Sbjct: 351 YTTLISGLDRAGKIDAAIVEYDEMVRNG 378
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 132/320 (41%), Gaps = 64/320 (20%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYKILCDSLGKSGRAF- 77
D+G Y ++ AF + G A+F R +D + P+ Y ++ K +
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVF----RRMVDSGVQPAIV-TYNVVLHVYSKMAVPWK 225
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E+++ MKE G+ D Y +LI A K A ++F E + G D F L+
Sbjct: 226 EVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLL 285
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
+Y K R + A++V +++ GC
Sbjct: 286 DVY-----------------------------------GKARRHDEAIEVIQEMERVGCP 310
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P VTY S+I++Y + GL +A + EM+ KG VV Y+++++ + G+I A+
Sbjct: 311 PSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVE 370
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHG-RAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFR 316
+M GC+PN+ YN+L+ MHG R K F + ++E R
Sbjct: 371 YDEMVRNGCKPNLCTYNALIKMHGVRGK--------------------FPEMMAVFDELR 410
Query: 317 MNGGVIDRAMAGIMVGVFSK 336
G V D ++ VF +
Sbjct: 411 SAGFVPDIVTWNTLLAVFGQ 430
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 134/310 (43%), Gaps = 19/310 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G+ D Y ++ + ++ A +F E ++ + P + L D GK
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFE--PDKV-TFNSLLDVYGK 290
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ R E ++ ++M+ G Y SLI S+ ++ A L +E E KG+ D+
Sbjct: 291 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVT 350
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ G ++ + + M + C ++ R + + V+++L
Sbjct: 351 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELR 410
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G +P VT+ +++ + + GL S+ VF EM++ G+ Y S+++ Y + G
Sbjct: 411 SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 470
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVI 296
AM++ +M G P+V YN+++ R Q EK Y++++
Sbjct: 471 LAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 530
Query: 297 SAYNMAREFD 306
AY A+ D
Sbjct: 531 HAYANAKRLD 540
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/383 (19%), Positives = 155/383 (40%), Gaps = 54/383 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+ GI D Y ++ + G K+ A +E + + + Y L
Sbjct: 337 QEMEVKGIKPDVVTYTTLISGLDRAG---KIDAAIVEYDEMVRNGCKPNLCTYNALIKMH 393
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G G+ E++ F +++ G + D + +L+ F +FKE ++ G + +
Sbjct: 394 GVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 453
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ L+ Y G+ + +++ + M A + +++ ++ + A K++ +
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 513
Query: 191 LISQGCIPGQVTYASIINAYC-----------------------------------RIGL 215
+ + C P + +Y+S+++AY ++
Sbjct: 514 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNN 573
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
++AEK F+E++QK + ++MV++YGK +R ++++ MK + YNS
Sbjct: 574 LAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNS 633
Query: 276 LMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
LM M+ R + + E Y TVI AY + + ++E + +G
Sbjct: 634 LMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 693
Query: 320 GVIDRAMAGIMVGVFSKLSQIEE 342
D I V + S EE
Sbjct: 694 LKPDVVTYNIFVKSYVSNSMFEE 716
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 38/300 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++++SAG V D + ++ F + G +V+ +F E +K P Y L S
Sbjct: 406 FDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM--KKAGYIPERD-TYVSLISS 462
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G ++ ++ M E GI D S Y +++ + A + AE+LF E EE+ D
Sbjct: 463 YSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 522
Query: 130 LEVFLKLVLMYIEEGMVE---------------------KTLEVVESMKNA--------- 159
+ L+ Y ++ KTL +V S N
Sbjct: 523 EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFL 582
Query: 160 ELNISDC-----ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
EL C + +V+ + K R K+ + TY S+++ Y R+G
Sbjct: 583 ELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLG 642
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
K E + E++ G +Y++++ YG+ G++++A RL ++MK G +P+V YN
Sbjct: 643 DCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYN 702
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 4/191 (2%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
K+ + + FLE ++ L ++ + GK+ ++ K MKE I
Sbjct: 570 KVNNLAEAEKAFLELRQKRCSL---DINVLNAMVSIYGKNRMVRKVEKILSLMKESAINL 626
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ Y SL+ ++ + + + E + E + G+ D + ++ Y +G +++ +
Sbjct: 627 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 686
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
MK + L + V + + A+++ +++QGC P + TY SI+ YCR
Sbjct: 687 SEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRN 746
Query: 214 GLYSKAEKVFI 224
G + A K+F+
Sbjct: 747 GKLTDA-KIFV 756
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 129/268 (48%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M G++LD Y +M+ +K G+ AAL + E + +L+P + +Y + +
Sbjct: 527 FKDMGERGLLLDHVNYATLMDGLFKTGNMP--AALKVGQELMERNLSPDAV-VYNVFINC 583
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + G+ E F ++M+ G+ D + Y ++I + A +L E + + +
Sbjct: 584 LCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPN 643
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + LV+ +E G+VEK ++ M +A + ++ S R+ + ++V+E
Sbjct: 644 LITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHE 703
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ G Y ++++ C G+ KA V EM +G + +++++ + K+
Sbjct: 704 LMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSS 763
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ +A A+M +G PN+ +N+L+
Sbjct: 764 HLDNAFATYAQMLHQGLSPNIATFNTLL 791
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 3/274 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L E+M + G+ LD Y ++ F+ GD++ A + E K D S +
Sbjct: 207 AALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDAD---AAWEVAERMKADGVEPSVVTHT 263
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L K R E + M G+L D ++L+ A LF+E ++
Sbjct: 264 TLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKI 323
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ + + + + V ++L ++ M + + + + +++ K A
Sbjct: 324 GVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEA 383
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V +S P VTY +++A+CR G AE++ ++M++K VV +SS++
Sbjct: 384 KDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNG 443
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G I A + KMK G PNV Y +L+D
Sbjct: 444 LVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLID 477
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++A + G+ + + L+ E + + +P+ IL + L K G + + R
Sbjct: 402 YTVLVDAHCRAGNIDGAEQMLLQMEEKSV--SPNVVTFSSIL-NGLVKRGCIAKAAGYMR 458
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
MK+ GI + Y +LI F + A +++++ +G+ + + LV + G
Sbjct: 459 KMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNG 518
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+E+ + + M L + +++G K AA+KV ++L+ + P V Y
Sbjct: 519 NIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYN 578
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
IN CR+G +S+A+ EM+ G + Y++M++ + G A++L+ +MK
Sbjct: 579 VFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWS 638
Query: 265 GCEPNVWIYNSLM 277
+PN+ Y +L+
Sbjct: 639 SIKPNLITYTTLV 651
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 121/271 (44%), Gaps = 7/271 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILC 67
+ +M G+ + YC +++ K+ + L E SR +DL MY +
Sbjct: 317 FREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLV-----MYTTVM 371
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D LGK G+ E R I + Y L+ + + AE++ + EEK +
Sbjct: 372 DRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVS 431
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ F ++ ++ G + K + MK++ + + +++GF K + AA+ V
Sbjct: 432 PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDV 491
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
Y ++ +G S++N + G +AE +F +M ++G V Y++++ K
Sbjct: 492 YRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFK 551
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
TG + A+++ ++ + P+ +YN ++
Sbjct: 552 TGNMPAALKVGQELMERNLSPDAVVYNVFIN 582
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D K L +RDM +G+ + + SL+ ++ AE LFK+
Sbjct: 472 YGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMG 531
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G+L D + L+ + G + L+V + + L+ + V +N + +
Sbjct: 532 ERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFS 591
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +++ + G P Q TY ++I+A CR G SKA K+ EM+ ++ Y+++V
Sbjct: 592 EAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLV 651
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G + A L+ +M G P Y ++
Sbjct: 652 VGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVL 686
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 89/185 (48%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ +LI + + ++ A + + +G+ D+ + LV + G + EV E MK
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ S ++ + K + A +YE ++ G +P VT +++++ CR G +S
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFS 311
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A +F EM + G V Y + + K R+ +++ L+ +M +G ++ +Y ++M
Sbjct: 312 EAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVM 371
Query: 278 DMHGR 282
D G+
Sbjct: 372 DRLGK 376
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 116/280 (41%), Gaps = 3/280 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ ++M++ G+ D Y ++ A + G++ K AL L E + + P+ Y L
Sbjct: 596 FLKEMRNTGLEPDQATYNTMISAQCREGNTSK--ALKLLNEMKWSSIKPNLI-TYTTLVV 652
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L ++G + +M G P Y ++ + + V E+ + G+
Sbjct: 653 GLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHA 712
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ V+ LV + GM K V++ M + ++ G K A Y
Sbjct: 713 DITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATY 772
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
Q++ QG P T+ +++ G +A+ V EM++ G + + Y +V Y K
Sbjct: 773 AQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKK 832
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+A+RL +M KG P YNSL+ +A + Q
Sbjct: 833 SNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQ 872
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 109/223 (48%), Gaps = 5/223 (2%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D+T +T ++ + C G + +A +L +M +GI D + +LI + +
Sbjct: 713 DITVYNTLVHVLCCH--GMTRKATIVLD---EMLGRGIAPDTITFNALILGHCKSSHLDN 767
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A + + +G+ ++ F L+ G + + V+ MK L ++ ++V
Sbjct: 768 AFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVT 827
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G++K+ A+++Y +++S+G IP TY S+I+ + + G+ ++A+++F EM+++G
Sbjct: 828 GYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLH 887
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
Y ++ + K + L+ MK G +P+ +S+
Sbjct: 888 TSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSM 930
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 114/284 (40%), Gaps = 3/284 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N+ L +MK + I + Y ++ + G EK L E S TP +
Sbjct: 624 NTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLT-- 681
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y+ + + S + IL+ M G+ D +VY +L+ + A + E
Sbjct: 682 -YRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEM 740
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ D F L+L + + ++ M + L+ + ++ G
Sbjct: 741 LGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRI 800
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A V ++ G P +TY ++ Y + +A +++ EM KGF Y+S+
Sbjct: 801 GEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSL 860
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
++ + K G + A L ++MK +G Y+ L++ + +N
Sbjct: 861 ISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRN 904
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 96/236 (40%), Gaps = 10/236 (4%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + L +L SG +F + + DP S+I S+ S+ ++ A
Sbjct: 48 PPPARLLRRLIPALASSGLVAAASRF------RPVPGDPLTLNSIILSYCSLHALRPALS 101
Query: 117 LFKEA--EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
L + + + + D + + E+G V+ M + + G
Sbjct: 102 LLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVG 161
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQ--VTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
S+ A + E L+ I G V + ++I+ YC++ + A V M +G
Sbjct: 162 LSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLS 221
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
VV Y+++VA + +G A + +MK G EP+V + +L+ + + K + +
Sbjct: 222 LDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEE 277
>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 457
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 134/285 (47%), Gaps = 6/285 (2%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q L +++M +GI D Y +M ++++G E+ +F + R ++ PS Y
Sbjct: 94 QKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERG-EIYPSMAS-Y 151
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ + L K+G L FR+++ +G + + Y ++I + A + E +
Sbjct: 152 NVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCD 211
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G + + ++ G +E+ LE++ M+ C +V K
Sbjct: 212 FGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEE 271
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ E+++S G +P +Y ++IN +CR G + +A ++ E++++G KC Y+ +
Sbjct: 272 ADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGM-KC-DQYTHTII 329
Query: 244 MYG--KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
++G K G A + + M G N+ +NS++D G+A ++
Sbjct: 330 IHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDI 374
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 129/305 (42%), Gaps = 17/305 (5%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+T ST I ++ KS + + D + G+ D Y +LI + + A
Sbjct: 2 ITRLSTKFMNITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAA 61
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+ +E G+ D+ + L + + +++K+L++ + M + + ++++
Sbjct: 62 YNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHC 121
Query: 175 FSKRRAYWAAVKVYEQLISQGCI-PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+ + A V+ + +G I P +Y +IN C+ G + A +F ++++GF
Sbjct: 122 YFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVP 181
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LE-- 290
V+ Y++M+ K R+ DA R++ + G EPN Y ++M R L Q LE
Sbjct: 182 EVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEIL 241
Query: 291 -------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
Y TV++A + + + NG V D A M+ +F +
Sbjct: 242 SEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQ 301
Query: 338 SQIEE 342
+ +E
Sbjct: 302 GRFDE 306
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 106/263 (40%), Gaps = 20/263 (7%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG-MLRDLEVFLKLVL 138
L F +M + GI D Y L+ + + + + A +F++ E+G + + + ++
Sbjct: 97 LDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMIN 156
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
+ G V L + +++ ++NG K R A +V + G P
Sbjct: 157 GLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEP 216
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
+TY +++ R G + ++ EM++KGF AY ++VA KTGRI +A +
Sbjct: 217 NAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIA 276
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMN 318
KM G P+ L Y T+I+ + FD ++ +E
Sbjct: 277 EKMMSNGLVPD-------------------LASYNTMINLFCRQGRFDEALRLVDEIEKQ 317
Query: 319 GGVIDRAMAGIMVGVFSKLSQIE 341
G D+ I++ K E
Sbjct: 318 GMKCDQYTHTIIIHGLCKDGNFE 340
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 87/187 (46%), Gaps = 4/187 (2%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ GR + L+ +M+ KG D Y +++ + ++ A+E+ ++ G++ DL
Sbjct: 230 RCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLA 289
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ ++ ++ +G ++ L +V+ ++ + +I++G K + A K + +
Sbjct: 290 SYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYM 349
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ G V + SI++ + G KA KVF M+ K Y+S++ + +
Sbjct: 350 NTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEVKD----SFTYTSLLHNLCRAKKF 405
Query: 252 RDAMRLV 258
R A +L+
Sbjct: 406 RIASKLL 412
>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 145/333 (43%), Gaps = 34/333 (10%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSST--HMYKI 65
+++M+ + D Y ++ F K G + + + E ++ DL S + +
Sbjct: 182 FDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRK 241
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
LCD +A I F +K GI D Y ++I F + A L KE
Sbjct: 242 LCDY----SKAISI---FSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVD 294
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK--NAELNISDCISCVIVNGFSKRRAYWA 183
++ D + L+ M++E + L V+ MK N L+++ C ++++ + +
Sbjct: 295 VMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTC--NIMIDVYGQLDMVKE 352
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +++ ++ G P V+Y +I+ Y L+ +A +F MQ+K + VV Y++M+
Sbjct: 353 ADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIK 412
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
+YGKT A LV M+ +G EPN Y+T+IS + A
Sbjct: 413 IYGKTLEHEKATNLVQDMQKRGIEPNAIT-------------------YSTIISIWGKAG 453
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+ D + + R +G ID+ + M+ + K
Sbjct: 454 KLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEK 486
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 146/359 (40%), Gaps = 50/359 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ ++K +GI D Y ++ F K + A FL E R +D+ P + Y L +
Sbjct: 252 FSRLKRSGITPDIVAYNTMINVFGKAKLFRE--ARFLLKEMRAVDVMPDTVS-YSTLLNM 308
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++ + E L +MKE D + +I + + VK A+ LF + G+ +
Sbjct: 309 FVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPN 368
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ +Y E + + + + M+ E+ + ++ + K + A + +
Sbjct: 369 VVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQ 428
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ +G P +TY++II+ + + G ++ +F +++ G + V Y +M+ Y K G
Sbjct: 429 DMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAG 488
Query: 250 RIRDAMRLVAKMK-----PKGC-----------EPNVWIYNS---------------LMD 278
+ A RL+ ++K P+ E W++ ++D
Sbjct: 489 LVGHAKRLLHELKQPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMID 548
Query: 279 MHGRAKN----------LRQLEKYTT------VISAYNMAREFDMCVKFYNEFRMNGGV 321
+ R K +R + + V++AY R+FD Y E + G V
Sbjct: 549 LFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQEEGCV 607
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 126/277 (45%), Gaps = 3/277 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +KM+ + D Y ++E K+ D K ++F ++ +TP Y +
Sbjct: 214 LSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIF--SRLKRSGITPDIV-AYNTM 270
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ GK+ E ++M+ ++ D Y++L+ F + A + E +E
Sbjct: 271 INVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNC 330
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
DL ++ +Y + MV++ + M+ + + I+ + + + A+
Sbjct: 331 PLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIH 390
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ + + VTY ++I Y + + KA + +MQ++G + + YS++++++G
Sbjct: 391 LFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWG 450
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
K G++ + L K++ G E + +Y +++ + +A
Sbjct: 451 KAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKA 487
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 113/252 (44%), Gaps = 9/252 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M+ GI ++ Y I+ + K G ++ A LF + S ++ +Y+ + +
Sbjct: 428 QDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEI---DQVLYQTMIVAY 484
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+G + ++K+ D + I A ++ A +F++A + G L+D+
Sbjct: 485 EKAGLVGHAKRLLHELKQP----DNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDI 540
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKN-AELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
VF ++ ++ + LEV E M+N SD I+ V+ N + K R + A +Y
Sbjct: 541 SVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVL-NAYGKLRDFDTADALYM 599
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +GC+ + +++ Y Y + E +F + + + ++Y +
Sbjct: 600 EMQEEGCVFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYERGN 659
Query: 250 RIRDAMRLVAKM 261
R +DA R++ +M
Sbjct: 660 RSKDASRIINRM 671
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 118/256 (46%), Gaps = 21/256 (8%)
Query: 105 FASIAEVKVAEELFKE-AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI 163
ASI + K +EL+ + KG R+L + + L+ E +++L +++ + L
Sbjct: 100 LASIGQTKNEQELYSVLSPYKG--RELSMRFMVSLLSRESDW-QRSLAILDWINEEALYT 156
Query: 164 SDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
+ V++ + + + A +++++ + + TY+++I + + G++ A
Sbjct: 157 PSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSW 216
Query: 223 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+M+Q +V YS+++ + K A+ + +++K G P++ YN+++++ G+
Sbjct: 217 LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGK 276
Query: 283 AKNLRQLE----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
AK R+ Y+T+++ + +F + +E + +D
Sbjct: 277 AKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTT 336
Query: 327 AGIMVGVFSKLSQIEE 342
IM+ V+ +L ++E
Sbjct: 337 CNIMIDVYGQLDMVKE 352
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/229 (18%), Positives = 98/229 (42%), Gaps = 6/229 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + GK+ + +DM+++GI + Y+++I + ++ + LF++
Sbjct: 407 YNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLR 466
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-RRAY 181
G D ++ +++ Y + G+V ++ +K + NI + I+ + A
Sbjct: 467 SSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPD-NIPRTTAITILAKAGRIEEAT 525
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
W V+ Q G + + +I+ + R + +VF +M+ G + +
Sbjct: 526 W----VFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALV 581
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ YGK A L +M+ +GC ++ ++ ++G + ++LE
Sbjct: 582 LNAYGKLRDFDTADALYMEMQEEGCVFTDEVHFQMLSLYGARNDYKRLE 630
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 38/306 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ + +AG+ D Y +++ ++ D K + + E L S Y +
Sbjct: 210 LELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSL---SIVTYNVF 266
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L KS R +E ++ R + EKG+ D Y +L+ I E +V E+ E E G
Sbjct: 267 INGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGY 326
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLE---------------VVESMKNA------------ 159
+ L+ I+ G +E E V SM N+
Sbjct: 327 VPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAEL 386
Query: 160 --------ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
LN +D ++++GF +R A + ++I G +Y S+IN C
Sbjct: 387 LFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQC 446
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ G AE +F EM KG V Y+S+++ Y K G + A +L +M KG PN
Sbjct: 447 KFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTV 506
Query: 272 IYNSLM 277
+ +L+
Sbjct: 507 TFTALI 512
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
K+ G+V + Y ++ + K G E+ LF R L+ P+ Y IL D
Sbjct: 354 NKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLN--PNDV-TYTILIDGF 410
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G+ + +F M E GI Y S+I ++K+AE LFKE +KG+ +
Sbjct: 411 GRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTV 470
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ Y ++G+V K ++ M + + ++ G + A K++++
Sbjct: 471 ATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDE 530
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ +P +VTY +I +CR G ++A ++ EM +KG Y ++A TGR
Sbjct: 531 MVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGR 590
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ +A + + K + Y +L+
Sbjct: 591 VSEAKEFINDLHHKHQRLDELCYTALL 617
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 117/273 (42%), Gaps = 16/273 (5%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
SS+ + +L ++ R + + M++ G+L + ++L+ + A I + + EL
Sbjct: 153 SSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLEL 212
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F G+ D ++ +V E K E++ + ++S V +NG K
Sbjct: 213 FDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCK 272
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ W AV+V L +G VTY +++ CRI + ++ EM + G+ A
Sbjct: 273 SKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAA 332
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------- 290
S ++ K G I A L+ K+ G PN+++YNS+++ + L + E
Sbjct: 333 VSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMA 392
Query: 291 ---------KYTTVISAYNMAREFDMCVKFYNE 314
YT +I + + D+ ++N+
Sbjct: 393 ERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNK 425
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 137/318 (43%), Gaps = 8/318 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M I+ + Y ++E + G++ + A L E K L+P T+ Y+ L
Sbjct: 528 FDEMVELKILPNEVTYNVLIEGHCREGNTTR--AFELLDEMIKKGLSPD-TYTYRPLIAG 584
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L +GR E +F D+ K D Y +L+ F +K A +E +G+ D
Sbjct: 585 LCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMD 644
Query: 130 LEVFLKLVLMYIEEGMVEKTL-EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
L + L+ + + ++ L E++ M + + I ++++GF K A + +
Sbjct: 645 LVSYAVLISGALNQN--DRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFW 702
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+I +G +P VTY +++N + G ++A+ +F M + Y + K
Sbjct: 703 YIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKE 762
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
G + +A++L M +G N YN L+ + + ++ K V+ M +
Sbjct: 763 GNMENALQLHNAML-QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITY 821
Query: 309 VKFYNEFRMNGGVIDRAM 326
F E+ G V D AM
Sbjct: 822 STFIYEYCKRGNV-DAAM 838
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 1/229 (0%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL D KSG + +F+ M +G + + Y +L+ V A+ LFK
Sbjct: 681 IYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRM 740
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ + + + +EG +E L++ +M + +++ G+ + +
Sbjct: 741 LVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSF-ANTVTYNILIRGYCQIGKF 799
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K+ + +I G +P +TY++ I YC+ G A ++ M Q+G V ++ +
Sbjct: 800 QEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFL 859
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ G + A++L M +G +P Y+SLM + L Q++
Sbjct: 860 IHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 112/273 (41%), Gaps = 12/273 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G+ Y ++ + K G K L+ E + + P++ ++C
Sbjct: 458 FKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGK--GIAPNTVTFTALIC-G 514
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + + E K F +M E IL + Y LI A EL E +KG+ D
Sbjct: 515 LCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPD 574
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ G V + E + + + + + ++ GF K A+ +
Sbjct: 575 TYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQ 634
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI----EMQQKGFDKCVVAYSSMVAMY 245
+++ +G V+YA +I+ G ++ +++ EM KG V Y+ ++ +
Sbjct: 635 EMVGRGLQMDLVSYAVLIS-----GALNQNDRILFELLREMHGKGMQPDNVIYTILIDGF 689
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+G ++ A M +G PN Y +L++
Sbjct: 690 IKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVN 722
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 6/280 (2%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
S+ +++ M + G D Y ++ + G + LF E + S +
Sbjct: 348 SKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHS---V 404
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL D+ GK G E + F M+E+G++ D Y ++I +F+ + + A + F +
Sbjct: 405 YNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMI 464
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
G+ D V+ L+ + G + K E++ M + + + + I+N K
Sbjct: 465 AMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRV 524
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++ +I G P +T+ S+I+ Y +G KA V M G + VV YS++
Sbjct: 525 VEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSAL 584
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ Y + GRI D + L +M KG +P Y + +HG
Sbjct: 585 LDGYCRNGRIDDGLILFREMLSKGVKPTTITYGII--LHG 622
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 125/276 (45%), Gaps = 8/276 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
+ +M G++ D M + K G S++ A F + + K DL Y +L
Sbjct: 320 FREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLV-----TYSVLL 374
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
G ++L F M+ GI+ D SVY LI ++ + A +F + +E+G++
Sbjct: 375 HGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVM 434
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D + ++ + G + ++ M L + ++ GF A ++
Sbjct: 435 PDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKEL 494
Query: 188 YEQLISQGCI-PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++S+G P V + SIIN+ C+ G +A+ +F + G V+ ++S++ YG
Sbjct: 495 ISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYG 554
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
G++ A ++ M G EP+V Y++L+D + R
Sbjct: 555 LVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCR 590
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 120/276 (43%), Gaps = 12/276 (4%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS----THMY 63
+ + +M G+V D Y ++A K +K + + S + + H Y
Sbjct: 248 NLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGY 307
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL G+ E FR+M +G++ D S + S + K A E F
Sbjct: 308 SIL-------GQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAA 360
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG DL + L+ Y EG V L + SM+ + + ++++ + KR
Sbjct: 361 KGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDE 420
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ ++ Q+ +G +P TY ++I A+ R+G + A F +M G + Y+S++
Sbjct: 421 AMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQ 480
Query: 244 MYGKTGRIRDAMRLVAKMKPKGC-EPNVWIYNSLMD 278
+ G + A L+++M +G PN +NS+++
Sbjct: 481 GFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIIN 516
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 4/260 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ + M+ GIV D Y +++A+ K G ++ +F + + R + P + Y +
Sbjct: 387 LNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGV--MPDA-WTYGTV 443
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ + GR + + F M G+ D VY SLI F + A+EL E +G+
Sbjct: 444 IAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGI 503
Query: 127 LRDLEVFLKLVLMYI-EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
R VF ++ + +EG V + ++ + + + +++G+ A
Sbjct: 504 PRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAF 563
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
V + +IS G P VTY+++++ YCR G +F EM KG + Y ++
Sbjct: 564 GVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGL 623
Query: 246 GKTGRIRDAMRLVAKMKPKG 265
GR A ++ +M G
Sbjct: 624 FNDGRTVGAKKMCHEMIESG 643
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 123/299 (41%), Gaps = 19/299 (6%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI-CSFASIAEVKVAEELFKEA 121
Y IL D ++ R F + G+ D V L+ C + L
Sbjct: 122 YNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRM 181
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC--VIVNGFSKRR 179
E G+ D + ++ E+ ++ L+++ +M S + +++GF +
Sbjct: 182 PELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREG 241
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A ++ +++ QG +P VTY+S I+A C+ KAE V +M GF+ V Y+
Sbjct: 242 EVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYN 301
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQ-------- 288
M+ Y G+ ++ + +M +G P+++ NS M HG++K +
Sbjct: 302 CMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAK 361
Query: 289 -----LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
L Y+ ++ Y + +N NG V D ++ I++ + K ++E
Sbjct: 362 GHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDE 420
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 122/289 (42%), Gaps = 4/289 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M G+ D+ Y ++++ + S++ L + +P+ Y +
Sbjct: 179 HRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVS-YNTVIHGF 237
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G + F +M ++G++ D Y+S I + + AE + ++ G D
Sbjct: 238 FREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDK 297
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYE 189
+ ++ Y G ++T + M L + D +C ++ K A + ++
Sbjct: 298 VTYNCMIHGYSILGQWKETAGMFREMTRRGL-MPDIFTCNSYMSSLCKHGKSKEAAEFFD 356
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ ++G P VTY+ +++ Y G +F M+ G Y+ ++ YGK G
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKYTTVIS 297
+ +AM + +M+ +G P+ W Y +++ R L ++K+ +I+
Sbjct: 417 MMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIA 465
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 137/306 (44%), Gaps = 10/306 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDS-EKVAALFLECESRKLDLTPSSTHMYKILCD 68
+E+M +G+ Y +++ + K+G S +K+ L E SR LD + C
Sbjct: 245 FERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSAC- 303
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G+ G E +FF +K +G Y +L+ F A + E EE
Sbjct: 304 --GREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPP 361
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + ++V Y+ G E+ V+++M + + + I+N + + A++++
Sbjct: 362 DAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMF 421
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+Q++ GC+P TY +++ + L + K+ M+ G + +++M+AM GK
Sbjct: 422 DQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKK 481
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR-AKNLRQLEKYTTVISAYNMAREFDM 307
G + ++ +MK G EP+ +N+L+ +GR N + + +I A F
Sbjct: 482 GMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKA-----GFSP 536
Query: 308 CVKFYN 313
C+ YN
Sbjct: 537 CINTYN 542
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 143/323 (44%), Gaps = 31/323 (9%)
Query: 28 IMEAFYKIGDSEKVAALF------LECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILK 81
+++A G+ EK LF L + K+D H +++ LG+ + K
Sbjct: 154 LLKALDYSGNWEKALLLFEWSVLNLGIANEKID-----RHAIELMVRILGRESQHTVASK 208
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
F + + D Y +++ +++ + A E+F+ E G+ L + ++ +Y
Sbjct: 209 LFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYG 268
Query: 142 EEGMV-EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G +K LE+++ M++ L+ + +++ + A + + L S+G PG
Sbjct: 269 KMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGT 328
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY ++++ + + G++S+A V EM++ V Y+ +VA Y + G + ++
Sbjct: 329 VTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDA 388
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGG 320
M KG PN Y TT+I+AY + D ++ +++ G
Sbjct: 389 MASKGIMPNAVTY-------------------TTIINAYGRVGDIDKALEMFDQMMELGC 429
Query: 321 VIDRAMAGIMVGVFSKLSQIEEL 343
V + A ++G+ K S EE+
Sbjct: 430 VPNVATYNAVLGMLGKKSLSEEM 452
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 122/284 (42%), Gaps = 5/284 (1%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
N +K+H E+M AG Y ++ A + GD + ++ L+ R PS T
Sbjct: 519 NNDAAKMH--EEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDM--RNKGFRPSET 574
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y ++ S K G I + + + I + +L+ + + E F+
Sbjct: 575 S-YSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQA 633
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
++ G DL + ++ ++ + M ++ E++ + +A L +++ +++
Sbjct: 634 LQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGD 693
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
W A +V L + G P V+Y ++I +CR GL + ++ EM G C+ Y++
Sbjct: 694 CWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNT 753
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
++ Y G + +++ M C PN Y + D + +A+
Sbjct: 754 FISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKAR 797
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 143/342 (41%), Gaps = 58/342 (16%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M S GI+ ++ Y I+ A+ ++GD +K +F + +L P+ Y + L
Sbjct: 387 DAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQM--MELGCVPNVA-TYNAVLGML 443
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK + E++K MK G + + +++ K ++F+E + G D
Sbjct: 444 GKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDR 503
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC--VIVNGFSKRRAYWAAVKVY 188
+ F L+ Y G ++ E M A S CI+ ++N ++R + AA V
Sbjct: 504 DTFNTLISAYGRCGSNNDAAKMHEEMIKA--GFSPCINTYNALLNALARRGDWKAAESVI 561
Query: 189 EQLISQGCIPGQVTYASIINAYCRIG-----------LY--------------------- 216
+ ++G P + +Y+ ++++Y + G +Y
Sbjct: 562 LDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKC 621
Query: 217 ---SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
+ E+ F +Q+ G+ +V +SM++++ K A ++ + G +P++ +
Sbjct: 622 RSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTH 681
Query: 274 NSLMDMHGRAKN-------LRQLE---------KYTTVISAY 299
NSLMDM+ R + LR L+ Y TVI +
Sbjct: 682 NSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGF 723
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 61 HMYK---ILCDSL-------GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
H YK +LC+S+ RA E+L+ D G+ D + SL+ +A +
Sbjct: 637 HGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHD---AGLQPDLVTHNSLMDMYARGGD 693
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC- 169
AEE+ + + G DL + ++ + +G++++ + ++ M + + CI
Sbjct: 694 CWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEM--TSIGVGPCIFTY 751
Query: 170 -VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
++G++ + + V +I C P ++TY + + YC+ Y +A
Sbjct: 752 NTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEA 802
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 3/258 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M +G++ D Y I+ F G K A +FL+ + D Y L D L K
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSG-QPKEAIVFLK--KMRSDGVEPDVVTYNSLMDYLCK 198
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+GR E K F M ++G+ D + Y +L+ +A+ + L G+ + V
Sbjct: 199 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 258
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F LV Y ++ VE+ + V M+ LN + +++ K A+ +EQ+I
Sbjct: 259 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 318
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P + Y S+I++ C + KAE++F+EM +G + ++S++ + K GR+
Sbjct: 319 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVI 378
Query: 253 DAMRLVAKMKPKGCEPNV 270
++ +L M G +P++
Sbjct: 379 ESGKLFDLMVRIGVKPDI 396
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 116/253 (45%), Gaps = 10/253 (3%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ F+K GD +K+ + R ++P+ Y + +L K+ + ++
Sbjct: 91 YSTVINGFFKEGDLDKM------LDQR---ISPNVV-TYNSIIAALCKAQTVDKAMEVLT 140
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M + G++ D Y S++ F S + K A K+ G+ D+ + L+ + G
Sbjct: 141 TMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 200
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ ++ +SM L ++ G++ + A + + ++ G P ++
Sbjct: 201 RCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 260
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++ AY + +A VF +M+Q+G + V Y +++ + K+GR+ DAM +M +
Sbjct: 261 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE 320
Query: 265 GCEPNVWIYNSLM 277
G P+ +YNSL+
Sbjct: 321 GLRPDSIVYNSLI 333
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 97/218 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + SG+ E + F + M+ G+ D Y SL+ A ++F
Sbjct: 154 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 213
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G+ D+ + L+ Y +G + + +++ M ++ + + ++V ++K+
Sbjct: 214 KRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVE 273
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ V+ ++ QG P VTY ++I+ C+ G A F +M +G + Y+S++
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ A L +M +G + +NS++D H
Sbjct: 334 HSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSH 371
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKE 120
Y IL + L R+ E L+ M + G P V Y+++I F FKE
Sbjct: 54 YNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF------------FKE 101
Query: 121 AEEKGML-----RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNG 174
+ ML ++ + ++ + V+K +EV+ +M + + + DC++ IV+G
Sbjct: 102 GDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV-MPDCMTYNSIVHG 160
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F A+ +++ S G P VTY S+++ C+ G ++A K+F M ++G
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPD 220
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ Y +++ Y G + + L+ M G PN ++++ L+
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 263
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI-- 171
A +F E +G + D+ + L+ +E ++ LE++ M + + DC V+
Sbjct: 36 ARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMAD---DGGDCPPDVVSY 91
Query: 172 ---VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+NGF K ++++ Q P VTY SII A C+ KA +V M +
Sbjct: 92 STVINGFFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 144
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKN 285
G + Y+S+V + +G+ ++A+ + KM+ G EP+V YNSLMD +GR
Sbjct: 145 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 204
Query: 286 LRQL 289
R++
Sbjct: 205 ARKI 208
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y+E+M G+ DS Y ++ + EK LFLE R + L ST + + D
Sbjct: 313 YFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICL---STIFFNSIID 369
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
S K GR E K F M G+ D ++ A++LF G++
Sbjct: 370 SHCKEGRVIESGKLFDLMVRIGVKPD----------IITLGRNDEAKDLFVAFSSNGLVP 419
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + + I +G++E+ ++ SM++ C + +G +
Sbjct: 420 NYWTYRLMAENIIGQGLLEELDQLFLSMEDN--------GCTVDSGMLNF--------IV 463
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+L+ +G I TY S+I+ L + +FI++ G
Sbjct: 464 RELLQRGEITRAGTYLSMIDEK-HFSLEASTASLFIDLLSGG 504
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 120/295 (40%), Gaps = 47/295 (15%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
IM + G + +++ R + S + Y I S K+ R + L+ R+M
Sbjct: 117 IMNILVEFGYHNQAHKVYMRMRDRGVQ---SDVYTYTIRIKSFCKTARPYAALRLLRNMP 173
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV- 146
E G + Y +++ E A ELF E + + D+ F KLV + ++G+V
Sbjct: 174 ELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVF 233
Query: 147 --EKTL-----------------------------------------EVVESMKNAELNI 163
E+ L E + M N
Sbjct: 234 ESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEP 293
Query: 164 SDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
D I++G+ K+ A +V + + +G P + TY S+IN +C+ G +A VF
Sbjct: 294 DDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVF 353
Query: 224 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ KG +V Y++++ + G I A++L+ +M GC PN+W YN +++
Sbjct: 354 KDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVIN 408
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 103/226 (45%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D K G + + +D KG D Y SLI F + A +FK+
Sbjct: 298 YNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGL 357
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ + ++ L+ ++G++ L+++ M + +++NG K
Sbjct: 358 GKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVS 417
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + + I++GC P TY ++I+ YC+ A ++ M +G V+ Y++++
Sbjct: 418 DASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL 477
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
K G+ + M + M+ KGC PN+ YN ++D +AK + +
Sbjct: 478 NGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNE 523
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 127/312 (40%), Gaps = 39/312 (12%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G D YC ++ F K GD ++ A+F + + L PS +Y L L + G
Sbjct: 325 GFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGK--GLRPSIV-LYNTLIKGLSQQGLI 381
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
L+ +M E G L + Y +I + V A L +A KG D+ + L
Sbjct: 382 LPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTL 441
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ Y ++ ++ E+V M + + ++NG K +++++ + +GC
Sbjct: 442 IDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGC 501
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA-- 254
P +TY I+++ C+ ++A + EM+ KG VV++ ++ + K G I A
Sbjct: 502 TPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQ 561
Query: 255 ----------------------------------MRLVAKMKPKGCEPNVWIYNSLMDMH 280
M+L + MK GC+P+ + Y ++D
Sbjct: 562 LFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGF 621
Query: 281 GRAKNLRQLEKY 292
+ N+ Q K+
Sbjct: 622 CKMGNITQGYKF 633
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 16/290 (5%)
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D ++ R E ++ R M G D Y S+I + V+ A + K+A KG
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFK 327
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D + L+ + ++G ++ + V + L S + ++ G S++ A+++
Sbjct: 328 PDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ GC+P TY +IN C++G S A + + KG + Y++++ Y K
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCK 447
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEK------------- 291
++ A +V +M +G P+V YN+L++ G+++ + ++ K
Sbjct: 448 QLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIIT 507
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
Y ++ + A++ + V E + G D G + F K+ I+
Sbjct: 508 YNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDID 557
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 105/215 (48%), Gaps = 2/215 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TP Y L + L K+G++ E+++ F+ M+EKG + Y ++ S +V A
Sbjct: 466 MTPDVI-TYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEA 524
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVN 173
+L E + KG+ D+ F L + + G ++ ++ M K ++ + +IV+
Sbjct: 525 VDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVS 584
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
FS++ A+K++ + + GC P TY +I+ +C++G ++ K +E +K F
Sbjct: 585 AFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIP 644
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+ + ++ ++ +A+ ++ M KG P
Sbjct: 645 SLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVP 679
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 114/264 (43%), Gaps = 5/264 (1%)
Query: 38 SEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEK---GILED 94
++ + AL + ++ D + YK + LG G E+ K +M+E +LE
Sbjct: 18 TDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLE- 76
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y + ++ +V+ A + F+ + + ++ + +E G + +V
Sbjct: 77 -GAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYM 135
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M++ + + + F K +AA+++ + GC V Y +++ G
Sbjct: 136 RMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSG 195
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ A ++F EM + VVA++ +V + K G + ++ RL+ K+ +G PN++ +N
Sbjct: 196 EHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFN 255
Query: 275 SLMDMHGRAKNLRQLEKYTTVISA 298
+ R L + + + V+ A
Sbjct: 256 IFVQGLCREGALDRAVRNSRVVEA 279
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 137/316 (43%), Gaps = 27/316 (8%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y + + K G + +F E E + + + Y IL + L K + +
Sbjct: 94 YSRKINGLCKKGQIAEAMEIFREMEEKG---SAPDSFTYNILINGLCKDAQLEMGVSLMD 150
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M+ +G Y +LI F + V A ++ E E +G+ + + L+ + G
Sbjct: 151 EMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCG 210
Query: 145 MVEKTLEVVESMKNAELNISDCISCVI-----VNGFSKRRAYWAAVKVYEQLISQGCIPG 199
VE+ + V++ MK L ++C V+ ++G ++ + ++ +++I GC P
Sbjct: 211 EVERAILVLKEMK---LRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPN 267
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
TY ++I+ C+ G + +A + EM G + VV Y+S++ K G + A +
Sbjct: 268 NATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQI 327
Query: 260 KMKPKGCEPNVWIYNSLMD---------------MHGRAKNL-RQLEKYTTVISAYNMAR 303
M KG P+V+ Y SL+ RAK + YTT+I+ + A
Sbjct: 328 LMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQAD 387
Query: 304 EFDMCVKFYNEFRMNG 319
D ++ NE + NG
Sbjct: 388 RTDHALQLVNEMKSNG 403
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 122/307 (39%), Gaps = 40/307 (13%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ + +M+ G DS Y ++ K E +L E ++R T + Y L
Sbjct: 111 MEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVT---YTTL 167
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+GR + +M+ +GI + Y +LI EV+ A + KE + +G
Sbjct: 168 IHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGN 227
Query: 127 --LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
++ + +L+ ++G+ E +E ++ M + ++ +++G ++ ++ A
Sbjct: 228 ECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEA 287
Query: 185 VKVYEQLISQGC-----------------------------------IPGQVTYASIINA 209
+ ++++ GC P TY S+I
Sbjct: 288 AVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQG 347
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
C GL +A + EM+ KG V Y++++ + + R A++LV +MK G P
Sbjct: 348 LCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPA 407
Query: 270 VWIYNSL 276
IY L
Sbjct: 408 GDIYKIL 414
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 58/136 (42%), Gaps = 35/136 (25%)
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK------- 229
+RR +++++Y + ++Y+ IN C+ G ++A ++F EM++K
Sbjct: 68 RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127
Query: 230 ----------------------------GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
GF VV Y++++ + GR+ AM ++ +M
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187
Query: 262 KPKGCEPNVWIYNSLM 277
+ +G PN Y +L+
Sbjct: 188 EHRGITPNTVTYTALI 203
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 139/313 (44%), Gaps = 52/313 (16%)
Query: 12 KMKSAGIVLD----SGC------YCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSS 59
++K A +VL+ +GC Y ++++ + +GD +K + R +L +
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T + K CDS G + A IL RD G D Y LIC F I++++ A LF
Sbjct: 465 T-IIKGYCDS-GNTTSALRILDLMRD---GGCKPDEWSYTELICGFCKISKMESAFGLFN 519
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E + G+ + + L+ Y ++ ++ ++E MK + + V+++G +K+
Sbjct: 520 EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQN 579
Query: 180 AYWAA-----------------------------------VKVYEQLISQGCIPGQVTYA 204
+ A ++++ ++I QGC+P +TY+
Sbjct: 580 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYS 639
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+I A + G +AE +F E+++ G + Y M+ Y +G++ A + +M
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699
Query: 265 GCEPNVWIYNSLM 277
GC+P +W Y L+
Sbjct: 700 GCQPTLWTYGVLI 712
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+T Y L + L SGR E R+M GIL I + + + A L
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F + + KG ++ + L+ G+++ + + M + + ++N +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
R A V + GC P VTY +I YC +G KA V M Q+G +V
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y++++ Y +G A+R++ M+ GC+P+ W Y L+
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 97/217 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L + G ++ + M +G+ + +Y ++I + V AE + K+
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 242
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E M D + ++L + + ++ L+V M + ++NG
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 302
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + ++I G +P T I A C +G Y A ++F++M+ KG + V Y++++
Sbjct: 303 EAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALI 362
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ +G ++ A+ L +M G PN YN+L+++
Sbjct: 363 SGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+ F + + G+ Y++L+ + + + + +G+ +L ++ ++
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
++G V +++ + +E++ ++ G ++ +A++V+ Q+ +GC P
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY+++IN C G ++A + EM G + + G DA RL
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344
Query: 260 KMKPKGCEPNVWIYNSLM 277
MK KGCEPNV+ Y +L+
Sbjct: 345 DMKNKGCEPNVYTYTALI 362
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 121/298 (40%), Gaps = 20/298 (6%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y + ++L K G + + + E + D Y S+I ++ A ++F +
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRR 179
++G + + L+ + G V + +++ M C +I
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII--ALCDMG 334
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
Y A +++ + ++GC P TY ++I+ C GL A +F M + G V Y+
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAK-------NLRQ- 288
+++ + + RI+ A ++ M GC PN+ YN ++ + G K N+ Q
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454
Query: 289 -----LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
L Y T+I Y + ++ + R G D ++ F K+S++E
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 113/281 (40%), Gaps = 38/281 (13%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
AF +L M G + Y +I + + + K A + ++G +L +
Sbjct: 409 AFVVLNL---MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
++ Y + G L +++ M++ + ++ GF K +A ++ +++ G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 196 CIPGQVTYASIINAYCR------------------------------IGL-----YSKAE 220
P +VTY ++I+ YC+ GL +S AE
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
++ M ++G VV Y++M+ K G A+ + KM +GC PN+ Y+SL+
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Query: 281 GRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
G+ + + E + + + + VK + M+G V
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 19/228 (8%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D L K+G L+ F M E+G L + Y+SLI + +V+ AE LF E E
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G++ D ++K++ YI G VE + M A + V++ G + Y
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL--KNEYL 720
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK--GFDK--CVVAY 238
A + L +P C G + + M K D V
Sbjct: 721 LADQRLAAL--PDVVPN-----------CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+++V+ GR +A L+ M +G P+ YNSL+ R +N+
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNV 815
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 33 YKIGDSEKVAALFLECESRKLDLTPS-STHMYKILCDSLGKSGRAFEILKFFRDMKEKGI 91
Y+ D + V+ + ++ +L P S + L +L +GR FE + M +G+
Sbjct: 740 YQTTDQDAVSVM----SAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGL 795
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D Y SL+CS + V +A +FK +G L + +L+ + ++
Sbjct: 796 CPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARI 855
Query: 152 VVESMKNAELNISDCISCVIVNGF 175
E+M N D + V+++G
Sbjct: 856 TFENMLMRTWNPDDVVQAVLIDGL 879
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 41/266 (15%)
Query: 19 VLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM-YKILCDSLGKSGRAF 77
+LD Y I+ A+ + G EK LF R ++ PS T + Y ++ D GK GR++
Sbjct: 207 LLDVRAYTTILHAYSRTGKYEKAIDLF----ERMKEMGPSPTLVTYNVILDVFGKMGRSW 262
Query: 78 -EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
+IL +M+ KG+ D ++++ + A ++ A+E F E + G
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCG----------- 311
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
E G V NA L + F K Y A+ V +++ C
Sbjct: 312 ----YEPGTV---------TYNALLQV-----------FGKAGVYTEALSVLKEMEENSC 347
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
VTY ++ AY R G +A V M +KG + Y++++ YGK G+ +A++
Sbjct: 348 PADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALK 407
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGR 282
L MK GC PN YN+++ + G+
Sbjct: 408 LFYSMKEAGCVPNTCTYNAVLSLLGK 433
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 38/320 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++M+S G+ D ++ A + G + F E +S + T Y L
Sbjct: 266 LGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE---PGTVTYNAL 322
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
GK+G E L ++M+E D Y L+ ++ K A + + +KG+
Sbjct: 323 LQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV 382
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV-------------- 172
+ + + ++ Y + G ++ L++ SMK A + C ++
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIK 442
Query: 173 -------NGFSKRRAYWAAV--------------KVYEQLISQGCIPGQVTYASIINAYC 211
NG S RA W + +V+ ++ S G P + T+ ++I+AY
Sbjct: 443 MLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG 502
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
R G A K++ EM + GF+ CV Y++++ + G R +++ MK KG +P
Sbjct: 503 RCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTET 562
Query: 272 IYNSLMDMHGRAKNLRQLEK 291
Y+ ++ + + N +E+
Sbjct: 563 SYSLMLQCYAKGGNYLGIER 582
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 127/299 (42%), Gaps = 9/299 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M AG Y ++ A + GD + + +S+ T +S Y ++
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETS---YSLMLQC 570
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G I + +KE I + +L+ + + +E F ++ G D
Sbjct: 571 YAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPD 630
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ +F ++ ++ M ++ ++ES++ L+ +++ + +R W A ++ +
Sbjct: 631 MVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILK 690
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L P V+Y ++I +CR GL +A ++ EM ++G C+ Y++ V+ Y G
Sbjct: 691 TLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG 750
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
+ ++ M C PN + ++D + RA KY+ + + + FD C
Sbjct: 751 MFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG------KYSEAMDFVSKIKTFDPC 803
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 118/252 (46%), Gaps = 17/252 (6%)
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ VA +L + + L D+ + ++ Y G EK +++ E MK + +
Sbjct: 189 SQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTY 248
Query: 169 CVIVNGFSKRRAYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
VI++ F K W + V +++ S+G + T +++++A R GL +A++ F E++
Sbjct: 249 NVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELK 308
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
G++ V Y++++ ++GK G +A+ ++ +M+ C + YN L+ + RA +
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSK 368
Query: 288 QLE----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
+ YTTVI AY A + D +K + + G V + ++
Sbjct: 369 EAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428
Query: 332 GVFSKLSQIEEL 343
+ K S+ E+
Sbjct: 429 SLLGKKSRSNEM 440
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 137/340 (40%), Gaps = 54/340 (15%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M G++ ++ Y +++A+ K G ++ LF ++ P+ T Y + L
Sbjct: 375 EMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM--KEAGCVPN-TCTYNAVLSLL 431
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK R+ E++K DMK G + + + +++ + K +F+E + G D
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDR 491
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ F L+ Y G ++ M A N ++N +++ + + V
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 191 LISQGCIPGQVTYASIINAYCRIGLY---------------------------------- 216
+ S+G P + +Y+ ++ Y + G Y
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 217 -SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+ +E+ F ++ G+ +V ++SM++++ + A ++ ++ G P++ YNS
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 276 LMDMHGRAKN-------LRQLEK---------YTTVISAY 299
LMDM+ R L+ LEK Y TVI +
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF 711
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 36/168 (21%)
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+V S + L + + + V + Y A K+ +++ Q + Y +I++AY
Sbjct: 162 LVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYS 221
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR--------------------- 250
R G Y KA +F M++ G +V Y+ ++ ++GK GR
Sbjct: 222 RTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDE 281
Query: 251 ---------------IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+R+A A++K G EP YN+L+ + G+A
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 3/283 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y ++M+ G+V D Y I+ K G ++ L E L P+ +Y L D
Sbjct: 300 YKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGL--MPNVV-VYSTLID 356
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ G A E K ++M G+ + Y +LI + + A + K+ + G +
Sbjct: 357 GFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMA 416
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + ++ ++ + E+ ++ M+ ++ + +I+NG + A +
Sbjct: 417 DTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLL 476
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
EQ+I+ G P YA +I+ YCR G +S A + +M ++ + Y+S++
Sbjct: 477 EQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNV 536
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
G++ +A+ +M KG +PN + Y L+ + A NL + E+
Sbjct: 537 GKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQ 579
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 137/320 (42%), Gaps = 34/320 (10%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF---------------- 45
N + +M+ GI + Y I+ +IG+SE+ + L
Sbjct: 433 NKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYA 492
Query: 46 -------------LECESRKL----DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKE 88
L CE+ K +LTP + Y L L G+ E ++++ +M E
Sbjct: 493 PLISGYCREGSFSLACETLKKMTRENLTPD-LYCYNSLIIGLSNVGKMDEAIEYYDEMLE 551
Query: 89 KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
KG + Y LI ++ ++ AE+L + G+ + ++ +++ Y + +EK
Sbjct: 552 KGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEK 611
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
++SM L + + ++++ S AAV V + G +P + Y S+I+
Sbjct: 612 VSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLIS 671
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+C+ KA + EM +KG + + Y++++ + K+ I A + + KG P
Sbjct: 672 GFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPP 731
Query: 269 NVWIYNSLMDMHGRAKNLRQ 288
N Y +L+D + +A ++R
Sbjct: 732 NCVTYTTLIDGYCKAGDIRD 751
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 122/261 (46%), Gaps = 7/261 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ YY++M G + Y ++ + G+ EK L + + L+ + +Y +
Sbjct: 543 IEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLN---PNDFIYAQI 599
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ KS ++ + M EKG++ D +Y +I + +S ++ A + E+ G+
Sbjct: 600 LEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGL 659
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC--VIVNGFSKRRAYWAA 184
+ D ++ L+ + + +EK + +++ M A+ I ISC +++GF K A
Sbjct: 660 VPDSLIYGSLISGFCKAADMEKAVGLLDEM--AKKGIEPGISCYNALIDGFCKSDDISHA 717
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ +I +G P VTY ++I+ YC+ G A ++ EM +G YS + A
Sbjct: 718 RNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAG 777
Query: 245 YGKTGRIRDAMRLVAKMKPKG 265
+G ++ A+ + +M +G
Sbjct: 778 CSNSGDLQQALFITEEMIARG 798
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 148/342 (43%), Gaps = 29/342 (8%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ AGI D Y ++EA+ K+ D E + E L + Y L L +
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSL---NVVTYNTLIGGLCR 290
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G E + ++M++ G++ D Y ++I A+ L E G++ ++ V
Sbjct: 291 AGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVV 350
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ ++ +G ++ ++V+ M A + + ++ G K A ++ +Q+
Sbjct: 351 YSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMT 410
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G + +TY +I + R +A + EM++ G V YS ++ + G
Sbjct: 411 KIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESE 470
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGR-------AKNLRQLEK---------YTTVI 296
A L+ +M G +PN ++Y L+ + R + L+++ + Y ++I
Sbjct: 471 RASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLI 530
Query: 297 SAYNMAREFDMCVKFYNE-----FRMN----GGVIDR-AMAG 328
+ + D +++Y+E F+ N GG+I +MAG
Sbjct: 531 IGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAG 572
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 119/278 (42%), Gaps = 3/278 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G + D+ Y ++E + + E+ A L E RK ++P+ + Y I+ + L
Sbjct: 407 KQMTKIGYMADTMTYNLVIEGHLRQHNKEE--AFLLLNEMRKGGISPN-VYTYSIIINGL 463
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G + M G+ + VYA LI + +A E K+ + + DL
Sbjct: 464 CQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDL 523
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L++ G +++ +E + M +D +++G+S A ++ Q
Sbjct: 524 YCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQ 583
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+++ G P YA I+ Y + K M +KG Y ++ +G
Sbjct: 584 MLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGH 643
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
++ A+ +++ ++ G P+ IY SL+ +A ++ +
Sbjct: 644 MQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEK 681
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 4/226 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q+ + ++ G+V DS Y ++ F K D EK L E + ++ Y
Sbjct: 645 QAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIE---PGISCY 701
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D KS F + KG+ + Y +LI + +++ A +L+ E
Sbjct: 702 NALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLT 761
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ D V+ L G +++ L + E M I + +V+GF KR
Sbjct: 762 EGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFN-TLVHGFCKRGKLQE 820
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
VK ++ + +P +T +I+ G S+A +F+E+QQK
Sbjct: 821 TVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQK 866
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 118/254 (46%), Gaps = 3/254 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ K GD++ L + E+ K++ + ++ + DSL K + L F+
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIE---ADVVIFNTIIDSLCKYRHVDDALNLFK 284
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M+ KGI + Y+SLI S A +L + EK + +L F L+ +++EG
Sbjct: 285 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ ++ + M ++ +VNGF A +++E ++S+ C P VTY
Sbjct: 345 KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++I +C+ ++F EM +G V Y++++ G +A ++ +M
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 265 GCEPNVWIYNSLMD 278
G P++ Y+ L+D
Sbjct: 465 GVPPDIMTYSILLD 478
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 125/272 (45%), Gaps = 5/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ +++M++ GI + Y ++ G + L + +K++ + + L
Sbjct: 280 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN---PNLVTFNAL 336
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K G+ E K + DM ++ I D Y SL+ F + A+++F+ K
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAV 185
D+ + L+ + + VE E+ M + L + D ++ ++ G A
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL-VGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
KV++Q++S G P +TY+ +++ C G KA +VF MQ+ + Y++M+
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++ D L + KG +PNV YN+++
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 148/341 (43%), Gaps = 20/341 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
EKM+ IV Y ++ F + S+ AL L + KL PS + +L +
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCR--RSQISLALALLGKMMKLGYEPSIVTLSSLL-NGY 165
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
R + + M E G D + +LI + A L ++G +L
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V + G + L ++ M+ A++ I I++ K R A+ ++++
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ ++G P VTY+S+I+ C G +S A ++ +M +K + +V +++++ + K G+
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL-------------EKYTT 294
+A +L M + +P+++ YNSL++ MH R +Q+ Y T
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV-GVF 334
+I + ++ + + + E G V D ++ G+F
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 35/220 (15%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L KS R + + FR+M +G++ D Y +LI + A+++FK+
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ + L+ G +EK LEV + M+ +E+ +
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD------------------ 504
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+Y Y ++I C+ G +F + KG VV Y++M+
Sbjct: 505 ----IY-------------IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+ +++A L+ KMK G PN YN+L+ H R
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 7/244 (2%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
+SR L PS K+L ++ K + ++ M+ I+ Y LI F
Sbjct: 78 KSRPL---PSIVEFNKLL-SAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRR 133
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+++ +A L + + G + L+ Y + + +V+ M
Sbjct: 134 SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 193
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++G AV + ++++ +GC P VTY ++N C+ G A + +M+
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA 253
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKN 285
+ VV +++++ K + DA+ L +M+ KG PNV Y+SL+ +GR +
Sbjct: 254 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 313
Query: 286 LRQL 289
QL
Sbjct: 314 ASQL 317
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
+++M S G+ D Y +++ G EK +F ++ KLD+ ++Y +
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI-----YIYTTMI 512
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ + K+G+ + F + KG+ + Y ++I S ++ A L K+ +E G L
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+ + L+ ++ +G + E++ M++
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 109/215 (50%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L L +S R+ + RDM+++ I + Y +L+ F++ +V +A +L E
Sbjct: 266 YNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEML 325
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ + F L+ +I EG ++ L++ M+ L ++ V+++G K +
Sbjct: 326 TFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFD 385
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A Y ++ G G++TY +I+ C+ G +A + EM + G D +V YS+++
Sbjct: 386 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALI 445
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ + GR++ A +V ++ G PN IY++L+
Sbjct: 446 NGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 125/299 (41%), Gaps = 5/299 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M + G+ + + +++ G+ ++ +F E++ L T S Y +L D L
Sbjct: 322 NEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVS---YGVLLDGL 378
Query: 71 GKSGRAFEILK-FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ F++ + F+ MK G+ Y +I + A + E + G+ D
Sbjct: 379 CKNAE-FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPD 437
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G ++ E+V + L+ + I ++ + +++YE
Sbjct: 438 IVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYE 497
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I +G P T+ ++ + C+ G ++AE+ M G V++ ++ YG +G
Sbjct: 498 AMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSG 557
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
A + +M G P + Y SL+ + +L EK+ + A + MC
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMC 616
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 124/288 (43%), Gaps = 20/288 (6%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA--SLICSFASIAEVK 112
L S+ ++ IL + G + L+ FR M G +PSVY +++ S E
Sbjct: 118 LCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGF--NPSVYTCNAILGSIVKSCEDV 175
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
KE ++ + D+ F L+ + EG +K+ +++ M+ + + ++
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+ + K+ + AA+++ + + +G TY +I+ CR +K + +M+++
Sbjct: 236 HWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIH 295
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK- 291
V Y++++ + G++ A +L+ +M G PN +N+L+D H N ++ K
Sbjct: 296 PNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 292 ---------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
Y ++ EFD+ FY + NG + R
Sbjct: 356 FHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 106/258 (41%), Gaps = 38/258 (14%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ +L SL K+G+ E +F R M GIL + + LI + S E A +F E
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMT 570
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G + L+ + G + + ++S++N + + ++ K
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLD 630
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIG------LYSKAEKV-------------F 223
AV ++ +++ + +P TY S+I+ CR G L++K + F
Sbjct: 631 KAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCF 690
Query: 224 I-----------------EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
+ +M + G + VV ++M+ Y + G+I L+ +M +
Sbjct: 691 VDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQ 750
Query: 267 EPNVWIYNSLMDMHGRAK 284
PN+ YN L +HG +K
Sbjct: 751 GPNLTTYNIL--LHGYSK 766
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 118/294 (40%), Gaps = 3/294 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
++ ++ ++M G+ D +++ + ++G EK L E ++ + P+ T Y
Sbjct: 701 KAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQ--NQGPNLT-TY 757
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL K +R M GIL D S+I +++ ++ K
Sbjct: 758 NILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFIC 817
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ D F L+ G + ++V M + +++ IV+ ++ +
Sbjct: 818 RGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQE 877
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+ V ++ QG P Y ++N CR+G A V EM VA S+MV
Sbjct: 878 SRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
K G+ +A L+ M P + + +LM + + N+ + + V+S
Sbjct: 938 ALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMS 991
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 99/251 (39%), Gaps = 37/251 (14%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D L K+G E + +M + GI D Y++LI F + +K A+E+
Sbjct: 406 YTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIY 465
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD----------------- 165
G+ + ++ L+ G +++T+ + E+M E N D
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMI-LEGNTPDHFTFNVLVTSLCKAGKV 524
Query: 166 --------CISC-----------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
C++ ++NG+ A V++++ G P TY S+
Sbjct: 525 AEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
+ C+ G AEK +Q V ++++ K+G + A+ L +M +
Sbjct: 585 LKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSI 644
Query: 267 EPNVWIYNSLM 277
P+ + Y SL+
Sbjct: 645 LPDSFTYTSLI 655
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/333 (18%), Positives = 128/333 (38%), Gaps = 55/333 (16%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ IL + L G + + M++ G Y +++ + K A EL
Sbjct: 196 FNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMN 255
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + L+ K ++ M+ ++ ++ ++NGFS
Sbjct: 256 LKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVL 315
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG------------ 230
A ++ ++++ G P VT+ ++I+ + G + +A K+F M+ KG
Sbjct: 316 IARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLL 375
Query: 231 --------FD-------------KCV--VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
FD CV + Y+ M+ K G + +A+ ++ +M G +
Sbjct: 376 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGID 435
Query: 268 PNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMARE--FDMCV 309
P++ Y++L++ R L+ ++ Y+T+I YN R +
Sbjct: 436 PDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLI--YNCCRMGCLKETI 493
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ Y + G D ++V K ++ E
Sbjct: 494 RIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAE 526
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 4/258 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M S GI+ ++ + ++ + G+ K ++F E K+ P+ Y L L K
Sbjct: 534 MTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMT--KVGHHPT-FFTYGSLLKGLCK 590
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G KF + ++ D + +LI + + A LF E ++ +L D
Sbjct: 591 GGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFT 650
Query: 133 FLKLVLMYIEEG-MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ +G V L E+ L + + V+G K + A +Q+
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQM 710
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
G VT ++I+ Y R+G K + EM + + Y+ ++ Y K +
Sbjct: 711 DKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHV 770
Query: 252 RDAMRLVAKMKPKGCEPN 269
+ L M G P+
Sbjct: 771 STSFMLYRSMILSGILPD 788
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 110/220 (50%), Gaps = 1/220 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA-EVKVAEELFKEA 121
Y L + ++GR + + F+ M + G+ Y + +++ ++ K L
Sbjct: 187 YTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSM 246
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+E G+ RD + L+ G+ + +V + MK A +++ + K R +
Sbjct: 247 KEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKH 306
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+ V +++ + GC P VTY S+I+AY + GL +A ++ EM+ +G VV Y+++
Sbjct: 307 EEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTL 366
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ + G+I A+ ++M GC PN+ YN+L+ +HG
Sbjct: 367 ISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHG 406
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 134/312 (42%), Gaps = 19/312 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ MK GI D Y ++ + G + A +F E ++ + P + L D
Sbjct: 244 DSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFE--PDKV-TFNSLLDVY 300
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK+ + E + + M+ G Y SLI ++ ++ A EL +E E +GM D+
Sbjct: 301 GKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 360
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ G ++ L M + + C ++ R + + V++
Sbjct: 361 VTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDD 420
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L S G +P VT+ ++++ + + GL S+ VF EM++ G+ Y S+++ Y + G
Sbjct: 421 LRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 480
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
AM + +M G P++ YN+++ R Q EK Y++
Sbjct: 481 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSS 540
Query: 295 VISAYNMAREFD 306
++ AY A++ D
Sbjct: 541 LLHAYANAKKLD 552
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 130/291 (44%), Gaps = 5/291 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEK-VAALFLECESRKLDLTPSSTHMYKILCD 68
+++M G+ Y + A+ K+ K V AL +S K D + Y L
Sbjct: 207 FQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVAL---VDSMKEDGIERDRYTYNTLIS 263
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ G E + F +MK G D + SL+ + + + A + K E G
Sbjct: 264 CCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTP 323
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ Y+++G++E+ LE+ + M+ + +++G + AA+ Y
Sbjct: 324 SVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATY 383
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ GC P TY ++I + G +++ VF +++ G+ VV ++++++++G+
Sbjct: 384 SEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQN 443
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKYTTVISA 298
G + + +MK G P Y SL+ + R Q +E Y +I A
Sbjct: 444 GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEA 494
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 120/276 (43%), Gaps = 6/276 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M AGI D Y ++ A + G E+ LF E R D P Y L +
Sbjct: 488 YKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDR--DCKPDELS-YSSLLHA 544
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ + ++ D+ + I + +L+ + + E+ F+E + D
Sbjct: 545 YANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLD 604
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ V +V +Y + MV+K EV+ M +N S +++ +S+ +
Sbjct: 605 INVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILT 664
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ S G P + +Y ++I AY R G +A ++F EM+ G +V Y+ + Y
Sbjct: 665 EIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANI 724
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM---DMHGR 282
+A+ LV + +GC PN +NS++ HGR
Sbjct: 725 MFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGR 760
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/364 (18%), Positives = 149/364 (40%), Gaps = 54/364 (14%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++M+ G+ D Y ++ ++G + AAL E + +P+ Y L
Sbjct: 345 LELKQEMEFRGMKPDVVTYTTLISGLDRVGKID--AALATYSEMVRNGCSPNLC-TYNAL 401
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
G G+ E++ F D++ G + D + +L+ F +FKE ++ G
Sbjct: 402 IKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGY 461
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + + ++ L+ Y G+ ++ +E+ + M A + +++ ++ + A K
Sbjct: 462 IPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEK 521
Query: 187 VYEQLISQGCIPGQVTYASIINAYC----------------------------------- 211
++ +++ + C P +++Y+S+++AY
Sbjct: 522 LFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNN 581
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
++ + EK F E++++ + ++MV++YGK ++ +++ M +
Sbjct: 582 KVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAA 641
Query: 272 IYNSLMDMHGRAKNLRQLE----------------KYTTVISAYNMAREFDMCVKFYNEF 315
YNSLM M+ R + + E Y TVI AY + + ++E
Sbjct: 642 TYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 701
Query: 316 RMNG 319
+ +G
Sbjct: 702 KCSG 705
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 130/267 (48%), Gaps = 7/267 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYKILC 67
+++MK AG + + Y ++ ++ + G ++ +E R ++ + P + Y +
Sbjct: 453 FKEMKKAGYIPERDTYVSLISSYSRCGLFDQA----MEIYKRMIEAGIYPDIS-TYNAVL 507
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+L + GR + K F +M ++ D Y+SL+ ++A+ ++ + L ++ + +
Sbjct: 508 SALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIE 567
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
R + LVL+ + + +T + + ++ ++ + +V+ + K + +V
Sbjct: 568 RHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEV 627
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ TY S+++ Y R+G K E + E++ G +Y++++ YG+
Sbjct: 628 LSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGR 687
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYN 274
G++++A RL ++MK G +P++ YN
Sbjct: 688 KGQMKEASRLFSEMKCSGVKPDIVTYN 714
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 62/161 (38%), Gaps = 52/161 (32%)
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK--- 247
++ P Y ++++A+ R G + A VF M G +V Y+ + Y K
Sbjct: 175 ILEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSV 234
Query: 248 ---------------------------------TGRIRDAMRLVAKMKPKGCEPNVWIYN 274
G R+A ++ +MK G EP+ +N
Sbjct: 235 PWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFN 294
Query: 275 SLMDMHGRAKN-------LRQLEK---------YTTVISAY 299
SL+D++G+A+ L+++E Y ++ISAY
Sbjct: 295 SLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAY 335
>gi|297789717|ref|XP_002862796.1| hypothetical protein ARALYDRAFT_359368 [Arabidopsis lyrata subsp.
lyrata]
gi|297308523|gb|EFH39054.1| hypothetical protein ARALYDRAFT_359368 [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 106/211 (50%), Gaps = 3/211 (1%)
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
C K F++++ R K + S Y +LI +F+++ + LF++ +E G
Sbjct: 157 CVKANKLREGFDVVQNMRKFKFRPAF---SAYTTLIGAFSAVNHSDMMLALFQQMQELGY 213
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ +F L+ + +EG V+ L +++ MK++ L+ + V ++ F K A K
Sbjct: 214 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 273
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ + G P +VTY S+I C+ +A ++F +++ C AY++M+ YG
Sbjct: 274 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 333
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G+ +A L+ + + KG P+V YN ++
Sbjct: 334 SAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 364
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/285 (18%), Positives = 114/285 (40%), Gaps = 18/285 (6%)
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
RA E +++ E + P Y SL+ A +++ E G +
Sbjct: 93 NRAIEYFRWYERRTE--LPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTC 150
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
+++VL ++ + + +VV++M+ + + ++ FS + +++Q+
Sbjct: 151 IEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLALFQQMQE 210
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
G P + ++I + + G A + EM+ D +V Y+ + +GK G++
Sbjct: 211 LGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 270
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK---------YTTVIS 297
A + +++ G +P+ Y S++ + +A L LEK Y T+I
Sbjct: 271 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 330
Query: 298 AYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y A +FD R G + ++ K+ +++E
Sbjct: 331 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 375
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 142/292 (48%), Gaps = 6/292 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+MKS G+ L Y ++ F KI DS+ LF E +++ L+ + +Y + +
Sbjct: 322 EEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTK---LSSLNGIIYSNIIHAH 378
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+SG + +M+E GI VY S++ + I +F+ +E G +
Sbjct: 379 CQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSI 438
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +Y++ G V K L + + M++ + ++ +++NGF + A ++E+
Sbjct: 439 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEE 498
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G P + Y +I A+C++G +A + +MQ++ A+ ++ Y G
Sbjct: 499 MLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD 558
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
++ A+ + M+ GC P V YN+L +HG + ++++ +V+ ++A
Sbjct: 559 MKSALDTLDLMRRSGCVPTVMTYNAL--IHGLVRK-HKVQRAVSVLDKMSIA 607
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 151/369 (40%), Gaps = 41/369 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK----------------- 52
+E+M +G+ D Y ++EAF K+G+ ++ + + + +
Sbjct: 496 FEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAV 555
Query: 53 ----------LDLTPSS-----THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
LDL S Y L L + + + M GI +
Sbjct: 556 AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHT 615
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y ++ +A+ ++ A E F + +E G+ D+ ++ L+ + G ++ L V M
Sbjct: 616 YTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 675
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
++ + I ++++G+++R W A + +Q+ G P TY S INA C+ G
Sbjct: 676 FQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQ 735
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+AEKV EM G V Y++++ + + A++ +MK G +P+ Y+ L+
Sbjct: 736 RAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLV 795
Query: 278 DMHGRAKNLRQLEKYTTVISAYNMAREFDMCV---------KFYNEFRMNGGVIDRAMAG 328
+ + YT +IS E D+ V ++ ++ GG + A+
Sbjct: 796 TSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHWSRWLHKIERTGGALTEALQR 855
Query: 329 IMVGVFSKL 337
I ++ L
Sbjct: 856 IFPPDWNSL 864
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 131/309 (42%), Gaps = 32/309 (10%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECE----SRKLDLT 56
+SQS + +++ K+ L+ Y I+ A + G+ E+ L E E +D+
Sbjct: 347 NDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVY 406
Query: 57 PSSTHMYKILCD---------------------SLG-------KSGRAFEILKFFRDMKE 88
S H Y I+ + S G K G+ + L ++M+
Sbjct: 407 HSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMES 466
Query: 89 KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
GI + Y+ LI F + + A +F+E G+ D ++ L+ + + G +++
Sbjct: 467 CGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDR 526
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+ ++E M+ + S+ I+ G++ +A+ + + GC+P +TY ++I+
Sbjct: 527 AICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIH 586
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
R +A V +M G Y+ ++ Y +G I A K+K G +
Sbjct: 587 GLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKL 646
Query: 269 NVWIYNSLM 277
+V+IY +L+
Sbjct: 647 DVYIYETLL 655
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 139/331 (41%), Gaps = 19/331 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+S GI ++ Y ++ F + D A+F E + L P +Y +L ++
Sbjct: 462 KEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM--LRSGLQPDRA-IYNLLIEAF 518
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G + M+++ + + +I +A ++K A + G + +
Sbjct: 519 CKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTV 578
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + + V++ + V++ M A + ++ +I+ G++ A + + +
Sbjct: 579 MTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK 638
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G Y +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 639 IKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGD 698
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
+ +A L+ +MK G PN+ Y S ++ +A ++++ EK YTT
Sbjct: 699 VWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTT 758
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
+I + D +K + E ++ G D A
Sbjct: 759 LIKGWARVSLPDRALKCFEEMKLAGLKPDEA 789
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 121/260 (46%), Gaps = 16/260 (6%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ +I +A + A F+ +G+ + VF LV Y + L VE MK
Sbjct: 266 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 325
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ L ++ ++++GF+K +A ++++ ++ + Y++II+A+C+ G
Sbjct: 326 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 385
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+AE++ EM++ G D + Y SM+ Y + + ++K G +P++ Y L+
Sbjct: 386 RAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL 445
Query: 278 DMHGR----AKNL---RQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
+++ + AK L +++E Y+ +I+ + +F + E +G
Sbjct: 446 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQ 505
Query: 322 IDRAMAGIMVGVFSKLSQIE 341
DRA+ +++ F K+ ++
Sbjct: 506 PDRAIYNLLIEAFCKMGNMD 525
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 11/259 (4%)
Query: 32 FYKIGDSEKVAALFLECESRKLDLT----PSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+ K GD A F +R ++ S H Y + D G L +MK
Sbjct: 273 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGA-------LSCVEEMK 325
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+G+ Y+ LI FA I + + A+ LFKEA+ K + ++ ++ + + G +E
Sbjct: 326 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 385
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ E+V M+ ++ + +++G++ + + V+E+L G P ++Y ++
Sbjct: 386 RAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLL 445
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N Y +IG +KA + EM+ G YS ++ + +A + +M G +
Sbjct: 446 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQ 505
Query: 268 PNVWIYNSLMDMHGRAKNL 286
P+ IYN L++ + N+
Sbjct: 506 PDRAIYNLLIEAFCKMGNM 524
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 38/240 (15%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + +KM AGI + Y IM + GD K F + + L L ++Y
Sbjct: 595 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKL---DVYIY 651
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ L + KSGR L R+M + I + +Y LI +A +V AE+L K+ +E
Sbjct: 652 ETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKE 711
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ ++ + + + G M+ AE
Sbjct: 712 DGVPPNIHTYTSYINACCKAG----------DMQRAE----------------------- 738
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
KV E+++ G P TY ++I + R+ L +A K F EM+ G +Y +V
Sbjct: 739 --KVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVT 796
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 60/298 (20%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+C G+ R F+ L+ F MK+ Y +++ ++ +A + +K E G
Sbjct: 92 ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIG 151
Query: 126 M---LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ + L V +K + +G V+
Sbjct: 152 LPPTVASLNVLIKALCR--NDGTVD----------------------------------- 174
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +K++ ++ +GC P TY ++I+ CR G +A+K+F EM +K VV Y+S++
Sbjct: 175 AGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI 234
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------ 290
+ + +AMR V +MK KG EPNV+ Y+SLMD G K+ R L+
Sbjct: 235 NGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMD--GLCKDGRSLQAMELFEMMMARG 292
Query: 291 ------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YTT+I+ ++ V+ + + G D + G ++ F +S+ E
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFRE 350
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 98/227 (43%), Gaps = 6/227 (2%)
Query: 51 RKLDLTPSSTHM---YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFAS 107
R++ L P+ + K LC + G LK F +M ++G D Y +LI
Sbjct: 148 REIGLPPTVASLNVLIKALCRNDGTVDAG---LKIFHEMPKRGCDPDSYTYGTLISGLCR 204
Query: 108 IAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI 167
+ A++LF E EK + + L+ V++ + VE MK + +
Sbjct: 205 FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFT 264
Query: 168 SCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
+++G K A++++E ++++GC P VTY ++I C+ +A ++ M
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+G Y +++ + + R+A + +M G PN +N
Sbjct: 325 LQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWN 371
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 118/278 (42%), Gaps = 11/278 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +M G DS Y ++ + G ++ LF E + D P+ Y L
Sbjct: 177 LKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK--DCAPTVV-TYTSL 233
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L S E +++ +MK KGI + Y+SL+ A ELF+ +G
Sbjct: 234 INGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGC 293
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L+ +E +++ +E+++ M L + +++GF + A
Sbjct: 294 RPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAAN 353
Query: 187 VYEQLISQGCIPGQVTYA-------SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+++I G P ++T+ ++ C S+A +++ M+ +G V
Sbjct: 354 FLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-TNYPSRAFTLYLSMRSRGISVEVETLD 412
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
S+V K G + A++LV ++ GC PN + L+
Sbjct: 413 SLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLI 450
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 90/212 (42%), Gaps = 9/212 (4%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + Y E+MK GI + Y +M+ K G S + LF +R P+
Sbjct: 242 NVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR--GCRPNMV- 298
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L L K + E ++ M +G+ D +Y +I F ++++ + A E
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEM 358
Query: 122 EEKGMLRD---LEVFLKL---VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
G+ + + +K V+ + + + SM++ +++ +V
Sbjct: 359 ILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCL 418
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
K+ + AV++ +++++ GCIP + T+ +I
Sbjct: 419 CKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLI 450
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 126/266 (47%), Gaps = 3/266 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM GI + Y ++ F K G++E F + + R +L + ++Y + +
Sbjct: 354 KMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNL---NAYIYGNIIYAYC 410
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
++ R+M+E+GI +Y +++ + I + +FK +E G +
Sbjct: 411 QACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVI 470
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ MY + G V K LEV + MK+ + + +++NGF K + + A V+E +
Sbjct: 471 TYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDV 530
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
I G P V Y +II A+C +G +A + EMQ++ + ++ + + G +
Sbjct: 531 IKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEM 590
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
R A+ + M+ GC P V +N+L+
Sbjct: 591 RRALEIFDMMRRSGCIPTVHTFNALV 616
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 155/349 (44%), Gaps = 26/349 (7%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS---THMYKILCDS 69
MKS GI + Y ++ F K+ D A+F + K L P ++ K C
Sbjct: 495 MKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDV--IKDGLKPDVVLYNNIIKAFC-G 551
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+G RA ++K +M+++ + +I FA E++ A E+F G +
Sbjct: 552 MGNMDRAIHMVK---EMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPT 608
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F LVL +E+ +EK +E+++ M A ++ + I++G++ A + +
Sbjct: 609 VHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFT 668
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ ++G TY +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 669 KMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRG 728
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLE---------KYT 293
I +A L+ +M +G +P++ Y S + DM K + ++E YT
Sbjct: 729 DIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYT 788
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAG-IMVGVFSKLSQIE 341
T+I + A + + + E ++ G D+A+ +M + S+ + E
Sbjct: 789 TLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAE 837
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 123/276 (44%), Gaps = 3/276 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N +H ++M+ S + I+ F + G+ + +F R+ P+ H
Sbjct: 554 NMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMM--RRSGCIPT-VH 610
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ L L + + + ++ +M G+ D Y +++ +A++ + A E F +
Sbjct: 611 TFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKM 670
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ D+ + L+ + G ++ L V M ++ + + ++++G+++R
Sbjct: 671 RNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDI 730
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
W A + +Q+ +G P TY S INA C+ G +A K EM+ G V Y+++
Sbjct: 731 WEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTL 790
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ + A+ ++K G +P+ +Y+ LM
Sbjct: 791 IHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLM 826
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 133/310 (42%), Gaps = 38/310 (12%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ GI Y +M+ + I + EK +F ++ PS Y L +
Sbjct: 424 EMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRL--KECGFAPSVI-TYGCLINMYT 480
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ + L+ + MK GI + Y+ LI F + + A +F++ + G+ D+
Sbjct: 481 KIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVV 540
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
++ ++ + G +++ + +V+ M+ + I++GF++ A+++++ +
Sbjct: 541 LYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMM 600
Query: 192 ISQGCI-----------------------------------PGQVTYASIINAYCRIGLY 216
GCI P + TY +I++ Y +G
Sbjct: 601 RRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDT 660
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
KA + F +M+ +G V Y +++ K+GR++ A+ + +M + N ++YN L
Sbjct: 661 GKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNIL 720
Query: 277 MDMHGRAKNL 286
+D R ++
Sbjct: 721 IDGWARRGDI 730
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 28 IMEAFY-KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDM 86
+M +Y + GD + F +R +D PSS H+Y L + E L R M
Sbjct: 299 LMVGYYARRGDMHRARQTFESMRARGID--PSS-HVYTSLIHAYAVGRDMEEALSCVRKM 355
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
E+GI Y+ ++ FA + A+ FK+A+E+ + ++ ++ Y + +
Sbjct: 356 NEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNM 415
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
++ +V M+ ++ I +++G++ R + V+++L G P +TY +
Sbjct: 416 DRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCL 475
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
IN Y +IG SKA +V M+ G + YS ++ + K +A + + G
Sbjct: 476 INMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGL 535
Query: 267 EPNVWIYNSLM 277
+P+V +YN+++
Sbjct: 536 KPDVVLYNNII 546
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/208 (16%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F +V Y G + + + ESM+ ++ S + +++ ++ R A+ ++
Sbjct: 297 FGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMN 356
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G VTY+ ++ + + G A+ F + +++ + Y +++ Y + +
Sbjct: 357 EEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMD 416
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFY 312
A LV +M+ +G + + IY+++MD Y M R + C+ +
Sbjct: 417 RAEALVREMEEEGIDAPLDIYHTMMD-------------------GYTMIRNEEKCLIVF 457
Query: 313 NEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
+ G G ++ +++K+ ++
Sbjct: 458 KRLKECGFAPSVITYGCLINMYTKIGKV 485
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 119/222 (53%), Gaps = 1/222 (0%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+L +SL K + K F+ M + G++ + VY L+ + + + + AE+L E EEK
Sbjct: 173 VLLNSLVKERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEK 232
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ D+ + L+ +Y ++ M + L V + M+ + + +++GFS+ A
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREA 292
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++ + I + VTY ++I+ YCR+ +A ++ M+ +GF VV Y+S++
Sbjct: 293 TRLFRK-IKGVVMANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRK 351
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ GRIR+A RL+ +M K EP+ N+L++ + + +++
Sbjct: 352 LCEDGRIREANRLLTEMSVKKIEPDNITCNTLINAYCKIEDM 393
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 132/302 (43%), Gaps = 21/302 (6%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++ H+Y +L + KSG + + K +M+EKG+ D Y +LI + + A +
Sbjct: 201 ANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSV 260
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E G+ D+ + L+ + EG + + + +K + + +++G+ +
Sbjct: 261 QDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIKGVVM-ANHVTYTTLIDGYCR 319
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A+++ E + S+G PG VTY SI+ C G +A ++ EM K + +
Sbjct: 320 MNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNIT 379
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR---------- 287
++++ Y K + A+++ KM G + +++ Y +L +HG K L
Sbjct: 380 CNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL--IHGFCKVLELDNAKEELFS 437
Query: 288 QLEK--------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
+EK Y+ ++ + + D K EF G D A+ ++ KL Q
Sbjct: 438 MIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPDVALYRGLIRRICKLEQ 497
Query: 340 IE 341
++
Sbjct: 498 VD 499
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 2/196 (1%)
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
VF L++ Y + GM+ ++ V E + + L V++N K R K++++
Sbjct: 134 HVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLTDTVWKIFKK 193
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G + Y +++A + G KAEK+ EM++KG + Y++++++Y K
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVK 310
+A+ + +M+ G P++ YNSL+ R +R+ + I MA
Sbjct: 254 HFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIKGVVMANHVTYTTL 313
Query: 311 FYNEFRMNGGVIDRAM 326
RMN ID A+
Sbjct: 314 IDGYCRMND--IDEAL 327
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 127/303 (41%), Gaps = 39/303 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++KM G+V + Y ++ A K GDSEK L E E + + P Y L
Sbjct: 191 FKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEK--GVFPD-IFTYNTLISV 247
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM--- 126
K FE L M+ G+ D Y SLI F+ ++ A LF++ + M
Sbjct: 248 YCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIKGVVMANH 307
Query: 127 ------------LRDLEVFLKL------------VLMY-------IEEGMVEKTLEVVES 155
+ D++ L+L V+ Y E+G + + ++
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 156 MKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M ++ D I+C ++N + K +AVKV +++I G +Y ++I+ +C++
Sbjct: 368 MSVKKIE-PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVL 426
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
A++ M +KG AYS +V + + + +L + + +G P+V +Y
Sbjct: 427 ELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPDVALYR 486
Query: 275 SLM 277
L+
Sbjct: 487 GLI 489
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 100/203 (49%), Gaps = 5/203 (2%)
Query: 90 GILEDP----SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
G+ EDP V++ L+ +A + + +F++ G+ L+ L+ ++E +
Sbjct: 124 GVSEDPEVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERL 183
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+ ++ + M + + + V+V+ SK A K+ ++ +G P TY +
Sbjct: 184 TDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNT 243
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+I+ YC+ ++ +A V M++ G +V Y+S++ + + GR+R+A RL K+K
Sbjct: 244 LISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIKGVV 303
Query: 266 CEPNVWIYNSLMDMHGRAKNLRQ 288
+V Y +L+D + R ++ +
Sbjct: 304 MANHV-TYTTLIDGYCRMNDIDE 325
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 4/264 (1%)
Query: 14 KSAGIVL-DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
K G+V+ + Y +++ + ++ D ++ L ESR P Y + L +
Sbjct: 298 KIKGVVMANHVTYTTLIDGYCRMNDIDEALRLREVMESR--GFCPGVV-TYNSILRKLCE 354
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR E + +M K I D +LI ++ I ++ A ++ K+ E G+ D+
Sbjct: 355 DGRIREANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYS 414
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + + ++ E + SM L+ +V+GF + K+ E+
Sbjct: 415 YKALIHGFCKVLELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFE 474
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P Y +I C++ A+ +F M++KG V Y++M Y +TG++
Sbjct: 475 KRGLCPDVALYRGLIRRICKLEQVDYAKVLFESMEKKGLMGDSVIYTTMAYAYWRTGKVT 534
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSL 276
DA L M + N+ +Y SL
Sbjct: 535 DASALFDVMYNRRLMVNLKLYKSL 558
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 119/238 (50%), Gaps = 3/238 (1%)
Query: 63 YKILCDSLGKSGRAFEIL-KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + +G++ R FE + ++M+ +G Y LI ++ + A +F +
Sbjct: 70 YTTMIGIMGRA-RNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQM 128
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+E+G D + LV ++ + G + +++ + M+ A VI++ K
Sbjct: 129 QEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKV 188
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+K++E+++ +G P VTY II+ + G Y A K++ +MQ GF V YS M
Sbjct: 189 SEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIM 248
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLEKYTTVISA 298
+ + G+ G +++A + +M+ G P+ IY ++DM G+A+N R LE Y ++ +
Sbjct: 249 MEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQKMLDS 306
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 160 ELNISDCISCVI-----VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
E+ C CV+ ++ + + A++++ Q+ +GC P +VTY ++++ + + G
Sbjct: 92 EMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAG 151
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ A ++ +MQQ GF YS ++ GK G++ +A++L +M +G P++ YN
Sbjct: 152 FHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYN 211
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
++D+ ++ N + M +K YN+ + G DR IM+ V
Sbjct: 212 IIIDLQAKSGN-------------------YVMAMKLYNDMQDAGFHPDRVTYSIMMEVL 252
Query: 335 SKLSQIEE 342
++ ++E
Sbjct: 253 GQIGHLQE 260
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + G++ E ++ F M+E+G D Y +L+ + A +++++ +
Sbjct: 105 YNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQ 164
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G D + ++ + G V + L++ E M S +I++ +K Y
Sbjct: 165 QAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYV 224
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+K+Y + G P +VTY+ ++ +IG +AE +F EM+Q G+ Y MV
Sbjct: 225 MAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMV 284
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
M+GK A+ KM G PNV I NSL+
Sbjct: 285 DMWGKARNAERALEWYQKMLDSGLTPNVQISNSLL 319
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 24/291 (8%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEK-GILEDPSVYASLICSFASIAE 110
+++ T S+ H+ ++L +SG A LKFF KE+ G D Y ++I
Sbjct: 27 RVNRTLSAFHINEVLKHQ-KESGLA---LKFFDWAKEQEGYKHDVCTYTTMIGIMGRARN 82
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
+ L +E +G + + +L+ Y + + + + M+ + C
Sbjct: 83 FEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCT 142
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+V+ SK + A+ +Y+++ G P TY+ II+ + G S+A K+F EM ++G
Sbjct: 143 LVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERG 202
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
F +V Y+ ++ + K+G AM+L M+ G P+ Y+ +M++ G+ +L++ E
Sbjct: 203 FAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAE 262
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+NE G V D + G+MV ++ K E
Sbjct: 263 -------------------LMFNEMEQAGWVPDAPIYGVMVDMWGKARNAE 294
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 3/200 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+KM+ AG D+ Y I+ K G + LF E R PS Y I+ D
Sbjct: 160 YQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVER--GFAPSLV-TYNIIIDL 216
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KSG +K + DM++ G D Y+ ++ I ++ AE +F E E+ G + D
Sbjct: 217 QAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPD 276
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ +V M+ + E+ LE + M ++ L + IS ++ + + + + A V E
Sbjct: 277 APIYGVMVDMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIE 336
Query: 190 QLISQGCIPGQVTYASIINA 209
+ + G +P T+ ++++
Sbjct: 337 TMKAWGLVPTLQTHTILLSS 356
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 10/293 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYK 64
LH+++ + + G LD Y ++ K G++ + RK+D L + MY
Sbjct: 154 LHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVL-----RKIDGLLVQPNVVMYN 208
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ DSL K +M K I D Y +LI + +K A LF + K
Sbjct: 209 TIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLK 268
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ D+ F LV +EG ++K V+ M ++ + +++G+ + A
Sbjct: 269 NIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKA 328
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V+ + +G P +Y+ +IN C+ + +A +F EM K V Y+S++
Sbjct: 329 TFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDG 388
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
K GRI DA LV +M +G +V Y+SL+D KN Q++K T+I+
Sbjct: 389 LLKYGRISDAWDLVNEMHNRGQPADVITYSSLLD--ALCKN-HQVDKAITLIT 438
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 2/196 (1%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F M +G+ D Y+ +I V A LFKE K M + + L+ ++
Sbjct: 332 FNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLK 391
Query: 143 EGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
G + ++V M N +D I+ +++ K A+ + ++ QG P
Sbjct: 392 YGRISDAWDLVNEMHNRG-QPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIY 450
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY +++ C+ G A+ V+ ++ KG+ V Y+ MV K G +A+ LV+KM
Sbjct: 451 TYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKM 510
Query: 262 KPKGCEPNVWIYNSLM 277
+ GC P+ Y +L+
Sbjct: 511 EDNGCIPDAVTYETLV 526
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 104/241 (43%), Gaps = 3/241 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +M+ ++ + K +F R + TP Y I+ + L K+ E + F+
Sbjct: 312 YNSLMDGYFLVKQENKATFVFNTMARRGV--TPD-VQSYSIMINGLCKTKMVDEAVNLFK 368
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M K + + Y SLI + A +L E +G D+ + L+ +
Sbjct: 369 EMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNH 428
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
V+K + ++ +K+ + + ++V+G K A VY+ L+ +G Y
Sbjct: 429 QVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYN 488
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++N C+ GL+ +A + +M+ G V Y ++V + + A++L+ +M +
Sbjct: 489 VMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQ 548
Query: 265 G 265
G
Sbjct: 549 G 549
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 116/295 (39%), Gaps = 17/295 (5%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
KIL SL K + F + M+ K I D + LI F + + A + + +
Sbjct: 69 KIL-SSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFK 127
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G D L+ G V + L + + ++ ++NG K A
Sbjct: 128 LGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRA 187
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A++V ++ P V Y +II++ C+ L A + EM K VV Y++++
Sbjct: 188 ALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIY 247
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLR------------- 287
GR+++A+ L +M K +P+V+ +N L+D G K R
Sbjct: 248 GCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDS 307
Query: 288 QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ Y +++ Y + ++ + +N G D IM+ K ++E
Sbjct: 308 NIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDE 362
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 101/221 (45%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + IL D L K G + M ++G+ + Y SL+ + + + A +
Sbjct: 272 PDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFV 331
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F +G+ D++ + ++ + MV++ + + + M + + + +++G K
Sbjct: 332 FNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLK 391
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A + ++ ++G +TY+S+++A C+ KA + +++ +G +
Sbjct: 392 YGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYT 451
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y+ +V K GR++DA + + KG +V +YN +++
Sbjct: 452 YTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVN 492
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 163/385 (42%), Gaps = 55/385 (14%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q +++K+ + G D Y ++ K+G++ L + +L + MY
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDG---NLVQPNVVMY 228
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ DS+ K E F +M KGI D Y++LI F + ++ A +LF +
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288
Query: 124 KGMLRDLEVFLKLVLMYIEEGM-----------------------------------VEK 148
+ + D+ F LV + ++G V K
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+ +M +N +++NGF K + + A+ +++++ + IP VTY+S+I+
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+ G S A ++ +M +G + Y+S++ K ++ A+ L+ K+K KG +P
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQP 468
Query: 269 NVWIYNSLMD---MHGRAKNLRQ-------------LEKYTTVISAYNMAREFDMCVKFY 312
N++ Y+ L+ G+ ++ R+ ++ YT +I + + F+ +
Sbjct: 469 NMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALL 528
Query: 313 NEFRMNGGVID-RAMAGIMVGVFSK 336
++ NG + D + I++ +F K
Sbjct: 529 SKMEDNGCIPDAKTYEIIILSLFKK 553
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 141/334 (42%), Gaps = 19/334 (5%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y F+ D + +LF R + TP + KIL SL KS +L +
Sbjct: 53 YSSTSTTFHSNNDVDDAVSLFNRLLRR--NTTPPAFEFNKIL-GSLVKSKHYHTVLYLSQ 109
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M+ +GI + LI F + + A +F + + G + D F L+ +G
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKG 169
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ + + + +++G K AA+ + +++ P V Y
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+II++ C++ L ++A +F EM KG VV YS++++ + G++ DA+ L KM +
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILE 289
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDMC 308
+P+V+ +N L++ + +++ Y +++ Y + +E +
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+N G D IM+ F K+ + +E
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDE 383
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 128/269 (47%), Gaps = 16/269 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L +L + IL+ ++E G+ D ++ S+I +F+ +K A +LF++ +
Sbjct: 51 YTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMK 110
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G F L+ Y G E+ L+++E +++ + + ++V + +
Sbjct: 111 ESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENME 170
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + ++++ G P VTY ++ AY G +AE++ +EM + S +V
Sbjct: 171 EAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIV 230
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL-------MDMHGRAKNLRQLEK---- 291
Y K G + DA R V +MK G PN++++NSL MD G + L +E+
Sbjct: 231 NGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVR 290
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEF 315
++T+++A++ A D C + +N+
Sbjct: 291 PDVVTFSTIMNAWSSAGRMDKCKEIFNDM 319
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 3/257 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM ++G+ D+ Y + A+ + G++ + + LE +R++ TP+ I+ +
Sbjct: 178 KMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRV--TPNE-RTCSIIVNGYC 234
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G + +F MKE G+L + V+ SLI F + + +E+ EE G+ D+
Sbjct: 235 KEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVV 294
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F ++ + G ++K E+ M AE+ ++ G+ + A + +
Sbjct: 295 TFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSM 354
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
G P V ++I+ +C G A KV+ +M + G + Y +++ YG+ +
Sbjct: 355 RKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQP 414
Query: 252 RDAMRLVAKMKPKGCEP 268
A L+ M+ KG P
Sbjct: 415 LKAEELLQVMEEKGVFP 431
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 136/325 (41%), Gaps = 19/325 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S L K++ G+ DS + I+ AF + G+ ++ LF + + T S+ +
Sbjct: 65 KSILRLISKVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTST---F 121
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L G +G+ E LK +++ G+ + Y L+ ++ + ++ A + +
Sbjct: 122 NTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVA 181
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
GM D + L Y E+G + E++ M N + ++ +IVNG+ K
Sbjct: 182 SGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVD 241
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A + ++ G +P + S+I + ++V M++ G VV +S+++
Sbjct: 242 ASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMN 301
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLEKY---- 292
+ GR+ + M EP++ ++ L + RA L + KY
Sbjct: 302 AWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHP 361
Query: 293 -----TTVISAYNMAREFDMCVKFY 312
TTVIS + A + + +K Y
Sbjct: 362 NVVICTTVISGWCSAGKMEHAMKVY 386
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 57/100 (57%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ L+ +G P +TY +++ A R L+ ++ ++++ G + ++S++
Sbjct: 32 AHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIIN 91
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ ++G +++AM+L KMK GC+P +N+L+ +G A
Sbjct: 92 AFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNA 131
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 70/163 (42%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A +F ++G L + LV + + + L ++ ++ + + I+N
Sbjct: 32 AHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIIN 91
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
FS+ A+K++ ++ GC P T+ ++I Y G +A K+ +Q G
Sbjct: 92 AFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKP 151
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
Y+ +V + + +A +V KM G +P+ YN+L
Sbjct: 152 NQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTL 194
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 71/154 (46%), Gaps = 18/154 (11%)
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
++N G +A +F + +G ++ Y+++VA + + +RL++K++ G
Sbjct: 19 LMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENG 78
Query: 266 CEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCV 309
+P+ ++NS+++ + N+++ K + T+I Y A + + +
Sbjct: 79 MKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEAL 138
Query: 310 KFYNEFRMNGGV-IDRAMAGIMVGVFSKLSQIEE 342
K EF +GGV ++ I+V + +EE
Sbjct: 139 KLL-EFLQDGGVKPNQRTYNILVRAWCNKENMEE 171
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 3/258 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M +G++ D Y I+ F G K A +FL+ + D Y L D L K
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSG-QPKEAIVFLK--KMRSDGVEPDVVTYNSLMDYLCK 198
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+GR E K F M ++G+ D + Y +L+ +A+ + L G+ + V
Sbjct: 199 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 258
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F LV Y ++ VE+ + V M+ LN + +++ K A+ +EQ+I
Sbjct: 259 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 318
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G P + Y S+I++ C + KAE++F+EM +G + ++S++ + K GR+
Sbjct: 319 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVI 378
Query: 253 DAMRLVAKMKPKGCEPNV 270
++ +L M G +P++
Sbjct: 379 ESGKLFDLMVRIGVKPDI 396
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 116/253 (45%), Gaps = 10/253 (3%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ F+K GD +K+ + R ++P+ Y + +L K+ + ++
Sbjct: 91 YSTVINGFFKEGDLDKML------DQR---ISPNVV-TYNSIIAALCKAQTVDKAMEVLT 140
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M + G++ D Y S++ F S + K A K+ G+ D+ + L+ + G
Sbjct: 141 TMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 200
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ ++ +SM L ++ G++ + A + + ++ G P ++
Sbjct: 201 RCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 260
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++ AY + +A VF +M+Q+G + V Y +++ + K+GR+ DAM +M +
Sbjct: 261 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE 320
Query: 265 GCEPNVWIYNSLM 277
G P+ +YNSL+
Sbjct: 321 GLRPDSIVYNSLI 333
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 97/218 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + SG+ E + F + M+ G+ D Y SL+ A ++F
Sbjct: 154 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 213
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G+ D+ + L+ Y +G + + +++ M ++ + + ++V ++K+
Sbjct: 214 KRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVE 273
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ V+ ++ QG P VTY ++I+ C+ G A F +M +G + Y+S++
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ A L +M +G + +NS++D H
Sbjct: 334 HSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSH 371
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKE 120
Y IL + L R+ E L+ M + G P V Y+++I F FKE
Sbjct: 54 YNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF------------FKE 101
Query: 121 AEEKGML-----RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNG 174
+ ML ++ + ++ + V+K +EV+ +M + + + DC++ IV+G
Sbjct: 102 GDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV-MPDCMTYNSIVHG 160
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F A+ +++ S G P VTY S+++ C+ G ++A K+F M ++G
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPD 220
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ Y +++ Y G + + L+ M G PN ++++ L+
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 263
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI-- 171
A +F E +G + D+ + L+ +E ++ LE++ M + + DC V+
Sbjct: 36 ARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMAD---DGGDCPPDVVSY 91
Query: 172 ---VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+NGF K ++++ Q P VTY SII A C+ KA +V M +
Sbjct: 92 STVINGFFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 144
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKN 285
G + Y+S+V + +G+ ++A+ + KM+ G EP+V YNSLMD +GR
Sbjct: 145 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 204
Query: 286 LRQL 289
R++
Sbjct: 205 ARKI 208
>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12300, mitochondrial-like [Glycine max]
Length = 450
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 125/272 (45%), Gaps = 5/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH+++K+ + GI D Y ++ KIGD+ L + + R LT + MY +
Sbjct: 160 LHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGR---LTKPNVEMYNTI 216
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+L K E F +M KGI + Y +I F V A LFKE +K M
Sbjct: 217 IDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNM 276
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + + L+ + G + E+++ M + + +++G K A+
Sbjct: 277 VPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIA 336
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ ++ ++T+ +++ C+ G A++VF ++ K +D V Y+ M+ Y
Sbjct: 337 LFNKMKDXRF--DRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYC 394
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G + +A+ + +KM+ GC P+ + +++
Sbjct: 395 KQGLLEEALTMRSKMEDNGCIPSAVTFEIIIN 426
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 1/223 (0%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP KIL DS + ++ KGI D L+ F + ++
Sbjct: 67 TPPVIQFNKIL-DSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGF 125
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+ + ++G F L+ +G V K L + + + ++NG
Sbjct: 126 SVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGV 185
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K A+K+ ++ + P Y +II+A C+ L S+A +F EM KG V
Sbjct: 186 CKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANV 245
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V+Y+ M+ + K+ + +A+ L +M K P + Y SLMD
Sbjct: 246 VSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMD 288
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 5/222 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M + GI + Y +++ F K ++ LF E + ++ P+ Y L D
Sbjct: 233 FSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQK--NMVPTIV-TYGSLMDG 289
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR + + +M ++GI D Y SLI + A LF + ++ D
Sbjct: 290 LCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRF--D 347
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F L+ + G ++ EV + + E ++ V++NG+ K+ A+ +
Sbjct: 348 RLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRS 407
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ GCIP VT+ IINA KAEK+ EM +G
Sbjct: 408 KMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIARGL 449
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 94/205 (45%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
T + L L G+ + L F + +GI D Y +LI I + + A +L
Sbjct: 138 PHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKL 197
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
++ + + ++E++ ++ + +V + + M ++ + +++ GF K
Sbjct: 198 VRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCK 257
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A+ +++++ + +P VTY S+++ C+ G S ++ EM +G V+
Sbjct: 258 SKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVIT 317
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMK 262
Y+S++ K G + A+ L KMK
Sbjct: 318 YNSLIDGLCKNGHLDRAIALFNKMK 342
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
I++ K + A ++ ++ ++G V+Y +I +C+ + +A +F EM QK
Sbjct: 215 TIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQK 274
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+V Y S++ K+GRI L+ +M +G +V YNSL+D G KN
Sbjct: 275 NMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLID--GLCKN 328
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L K E + + R M +G L D Y ++I + I+ V+ A EL K+A
Sbjct: 261 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 320
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + D + L+ EG VE+ LE+ + + + +V G +
Sbjct: 321 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 380
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++V ++ +GC P TY +IN C++G S A V + KG+ V +++++
Sbjct: 381 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 440
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y K ++ A++LV +M G P+ YNS+++
Sbjct: 441 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 476
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 143/331 (43%), Gaps = 51/331 (15%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D K E + +D KG + D Y SLI + +V+ A ELF EA+
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 355
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK----NAEL--------------NIS 164
KG+ D+ V+ LV +G++ L+V+ M + ++ NIS
Sbjct: 356 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 415
Query: 165 DCISCV-----------------IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
D + +++G+ KR +A+++ E++ G P +TY S++
Sbjct: 416 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 475
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N C+ G ++ + F EM KG + Y+ ++ + ++ ++ +A +++ KM +G
Sbjct: 476 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 535
Query: 268 PNVWIYNSLM-------DMHGRAKNLRQLEK---------YTTVISAYNMAREFDMCVKF 311
P+ +N+L+ D+ G ++LE+ + T+I A++ M K
Sbjct: 536 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 595
Query: 312 YNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++E G D +++ K + ++
Sbjct: 596 FDEMLSKGHRADSYTYRVLIDGSCKTANVDR 626
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 12/258 (4%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
YC ++ Y G + LF + + P+ K+L +L K G E
Sbjct: 157 YCTVVCGLYAHGHTHDARQLF--DQMLHTHVFPNLAAFNKVL-HALCKRGDVLEAGLLLG 213
Query: 85 DMKEKGI---LEDPSVYASLICSFASIAE-VKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ ++G+ L +++ +C + E V++ + + A + D+ + L+
Sbjct: 214 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA-----VPDVVTYNTLIRGL 268
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
++ M ++ + + M N D I++G+ K A ++ + + +G +P Q
Sbjct: 269 CKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQ 328
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY S+IN C G +A ++F E Q KG +V Y+S+V G I A++++ +
Sbjct: 329 VTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNE 388
Query: 261 MKPKGCEPNVWIYNSLMD 278
M +GC P++ YN +++
Sbjct: 389 MAEEGCHPDIQTYNIVIN 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 96/213 (45%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
T Y + + L K+G+ E+ + F++M KG +P Y LI +F +++ A ++
Sbjct: 466 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 525
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+ ++G+ D F L+ + G +E + + ++ + + ++ FS
Sbjct: 526 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 585
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A K++++++S+G TY +I+ C+ +A +EM +KGF +
Sbjct: 586 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMST 645
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ ++ R+ A+ ++ M G P V
Sbjct: 646 FGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 678
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 117/334 (35%), Gaps = 77/334 (23%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCDSLGKSG 74
G V D YC ++ GD E+ LF E +++ K D+ +Y L L G
Sbjct: 323 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV-----VYNSLVKGLCLQG 377
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
L+ +M E+G D Y +I + + A + +A KG L D+ F
Sbjct: 378 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 437
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ Y + ++ L++VE M + ++NG K + ++++I +
Sbjct: 438 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 497
Query: 195 GCIPGQVT-----------------------------------YASIINAYCRIG----- 214
GC P +T + ++I +CR G
Sbjct: 498 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 557
Query: 215 --LYSK----------------------------AEKVFIEMQQKGFDKCVVAYSSMVAM 244
L+ K AEK+F EM KG Y ++
Sbjct: 558 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 617
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KT + A + +M KG P++ + +++
Sbjct: 618 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 651
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 111/216 (51%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D GK G + +K MK +G+ Y +LI + + + A ++K
Sbjct: 283 YNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRML 342
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G + + L+ Y + G ++K +EV + M + S +++ K +
Sbjct: 343 DEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWE 402
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++++ ++ +GCIP VTY S+I A + + KA +VF +MQ+ G VV +++++
Sbjct: 403 LALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALI 462
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ Y K G+ R A+ +M+ + C+P+ ++N+++D
Sbjct: 463 SSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNAIID 498
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 129/300 (43%), Gaps = 57/300 (19%)
Query: 65 ILCDSLGKSG---RAFEILKFFRDMKEKGILE---DPSVYASLICSFASIAEVKVAEELF 118
+L L K+G RA EI ++ R++ L D Y ++I +V A +L
Sbjct: 174 LLLKDLSKAGLGFRAVEIFEWLRNLDANHPLASLCDVYTYTAMISMCIYQQDVDRAMDLA 233
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
KE + + R++ + L+ + I+ C +C +
Sbjct: 234 KEMRVRNIERNVHTYTALMNVCIK-----------------------CGNCPL------- 263
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A+ Y + G P VTY ++I+ Y ++GL+ + KV M+ +G + + Y
Sbjct: 264 -----ALDTYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTY 318
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL------------ 286
++++ G+ R+AM + +M +G PN YN+L+ +G+A L
Sbjct: 319 NTLIIACNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVH 378
Query: 287 ----RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
R + Y+++ISA A ++++ ++ +NE G + + ++ ++ +Q E+
Sbjct: 379 KGCERSVITYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEK 438
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 51 RKLD--LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
R LD +P++T Y L + GK+G+ ++++ F++M KG Y+SLI +
Sbjct: 340 RMLDEGYSPNAT-TYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKA 398
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ ++A ELF E +G + + + L+ + EK EV E M+
Sbjct: 399 GQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVVTF 458
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ + K + A+ YEQ+ Q C P + + +II+ G+ K QQ
Sbjct: 459 TALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNAIIDTLWETGVIWAQRKALALFQQ 518
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L Y M+ G + Y +++ + K+G E+ + ++ ++ + +
Sbjct: 260 NCPLALDTYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYN 319
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
I C+ G+ A + ++ M ++G + + Y +LI ++ ++ E+F+E
Sbjct: 320 TLIIACNMCGQPREAMAV---YKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEM 376
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
KG R + + L+ + G E LE+ M E I + ++ + + A
Sbjct: 377 VHKGCERSVITYSSLISACEKAGQWELALELFNEMA-GEGCIPNTVTYNSLITACAQGAQ 435
Query: 182 W-AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
W A +V+EQ+ GC P VT+ ++I++Y + G + +A + +M+ + + +++
Sbjct: 436 WEKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNA 495
Query: 241 MVAMYGKTGRI 251
++ +TG I
Sbjct: 496 IIDTLWETGVI 506
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 19/142 (13%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY +++N + G A + M+Q G VV Y++++ +YGK G ++++ M
Sbjct: 247 TYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLM 306
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
K +G EP L Y T+I A NM + + Y G
Sbjct: 307 KTEGVEP-------------------VLRTYNTLIIACNMCGQPREAMAVYKRMLDEGYS 347
Query: 322 IDRAMAGIMVGVFSKLSQIEEL 343
+ ++ + K Q++++
Sbjct: 348 PNATTYNALISAYGKAGQLDKV 369
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 42/332 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ ++ M + GI D Y ++ + ++ D + + ++ E+ D+ Y +L
Sbjct: 212 MELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVP---YNVL 268
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K + +E + +D+ K + D Y +L+C + E +V E+ E
Sbjct: 269 IDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRF 328
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS---------------------- 164
LV + G VE+ L +V+ + AE +S
Sbjct: 329 SPSEAAVSSLVEGLRKRGKVEEALNLVKRV--AEFGVSPNIFVYNALIDSLCKGRNFDEA 386
Query: 165 ---------------DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
D ++++ F +R A+ ++I G P Y S+IN
Sbjct: 387 ELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLING 446
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
+C+ G S AE + EM K + VV Y+S++ Y G+I A+RL +M KG P+
Sbjct: 447 HCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPS 506
Query: 270 VWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
++ + +L+ RA +R K T ++ +N+
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNV 538
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 3/264 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
YC ++ K+ + E L + E +L +PS + L + L K G+ E L +
Sbjct: 300 YCTLVCGLCKVQEFE--VGLEMIDEMLRLRFSPSEAAVSS-LVEGLRKRGKVEEALNLVK 356
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+ E G+ + VY +LI S AE LF + G+ + + L+ M+ G
Sbjct: 357 RVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRG 416
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ L + M + L S ++NG K AA + ++I++ P VTY
Sbjct: 417 KLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYT 476
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S++ YC G +KA +++ EM KG + ++++++ + G IRDA++L +M
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEW 536
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQ 288
+PN YN +++ + N+ +
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGNMSK 560
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 109/229 (47%), Gaps = 1/229 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEK-GILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ +L +S R + + F+ M K +L + ++L+ +A ELF +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G+ D+ ++ ++ E + + E++ M+ +++ V+++G K++
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
W AV + + L + P VTY +++ C++ + ++ EM + F A SS+
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
V K G++ +A+ LV ++ G PN+++YN+L+D + +N + E
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAE 387
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 11/277 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y +M GIV + ++ ++ G LF E + ++ P+ Y ++
Sbjct: 492 LRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMA--EWNVKPNRV-TYNVM 548
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI---CSFASIAEVKVAEELFKEAEE 123
+ + G + +F +M EKGI+ D Y LI C +E KV F +
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKV----FVDGLH 604
Query: 124 KGMLRDLEV-FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG E+ + L+ + EG +E+ L V + M +++ V+++G K +
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ + +++ +G P V Y S+I+A + G + +A ++ M +G V Y++++
Sbjct: 665 VFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
K G + +A L +KM+P PN Y +D+
Sbjct: 725 NGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDI 761
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 7/232 (3%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA--SLICSFASIA 109
K+ L P+ Y IL D + G+ L F +M + G+ PSVY SLI
Sbjct: 395 KIGLCPNDV-TYSILIDMFCRRGKLDTALSFLGEMIDMGL--KPSVYPYNSLINGHCKFG 451
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
++ AE L E K + + + L+ Y +G + K L + M + S
Sbjct: 452 DISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFT 511
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++G + AVK++ ++ P +VTY +I YC G SKA + EM +K
Sbjct: 512 TLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEK 571
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
G +Y ++ TG+ +A V + CE N Y L +HG
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL--LHG 621
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 118/272 (43%), Gaps = 9/272 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G+ + Y +++ F + G + AL E + L PS + Y L +
Sbjct: 390 FDRMGKIGLCPNDVTYSILIDMFCRRGKLD--TALSFLGEMIDMGLKPS-VYPYNSLING 446
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G +M K + Y SL+ + S ++ A L+ E KG++
Sbjct: 447 HCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPS 506
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ G++ +++ M + + V++ G+ + A +
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLN 566
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC---VVAYSSMVAMYG 246
++I +G +P +Y +I+ C G S+A KVF++ KG C + Y+ ++ +
Sbjct: 567 EMIEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKG--NCELNEICYTGLLHGFC 623
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ G++ +A+ + M +G + ++ Y L+D
Sbjct: 624 REGKLEEALSVCQDMGLRGVDLDLVCYGVLID 655
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 123/283 (43%), Gaps = 14/283 (4%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
S++K+ + + + L+ CY ++ F + G E+ ++ + R +DL
Sbjct: 594 SEAKV-FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDL---DLVC 649
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D K L ++M ++G+ D +Y S+I + + + K A ++
Sbjct: 650 YGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK--NAELN--ISDCISCVIVNGFSKR 178
+G + + + ++ + G V + + M+ N+ N C ++ G
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDM 769
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ AV+++ ++ +G + TY +I +CR G +A ++ M G + Y
Sbjct: 770 KK---AVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITY 825
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++M++ + ++ A+ L M KG P+ YN+L +HG
Sbjct: 826 TTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL--IHG 866
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 17/274 (6%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L + M G+ LD CY +++ K D + L E R L P +Y
Sbjct: 629 EEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDR--GLKPDDV-IY 685
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ D+ K+G E + M +G + + Y ++I V AE L +
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRP 745
Query: 124 KGMLRD-------LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ + L++ K V G ++K +E+ ++ L + + +++ GF
Sbjct: 746 GNSVPNQVTYGCFLDILTKGV------GDMKKAVELHNAILKGLLANTATYN-MLIRGFC 798
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
++ A ++ ++I G P +TY ++I+ CR KA +++ M +KG V
Sbjct: 799 RQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
AY++++ G + A L +M +G +PN
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNT 892
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 133/286 (46%), Gaps = 16/286 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M GI+ ++ Y +++ F K + +F ++ + L D
Sbjct: 342 YDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKG---CSPDVFTFNTLIDG 398
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ R + + +M E G++ D + Y +LI F + ++ A +L ++ G+ D
Sbjct: 399 YCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 458
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC-----------ISCVIVNGFSKR 178
+ L+ + G ++ LE+ ++M+ +++++ ++++G
Sbjct: 459 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINE 518
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A ++Y+++ +G +P +TY+S+IN C+ +A ++F M K F VV +
Sbjct: 519 GKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 578
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+++V+ Y K GR+ D + L +M +G + Y +L +HG K
Sbjct: 579 NTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITL--IHGFRK 622
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 3/220 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKE-KGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D + K G L R M+E I + +Y+++I A L+ E
Sbjct: 216 YGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEM 275
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+EKG+ DL + ++ + G + +++ M ++N + ++N + K R +
Sbjct: 276 QEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKF 335
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ A ++Y++++ +G IP +TY S+I+ +C+ AE +F M KG V ++++
Sbjct: 336 FEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTL 395
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ Y RI D L+ +M G + YN+L +HG
Sbjct: 396 IDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTL--IHG 433
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 143/360 (39%), Gaps = 30/360 (8%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ Y +M+ GI D Y +++ F G + L E RK++ + Y L
Sbjct: 270 NLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKIN---PNVVTYSALI 326
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++ K + FE + + +M +GI+ + Y S+I F + AE +F KG
Sbjct: 327 NAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCS 386
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ F L+ Y ++ E++ M L +++GF AA+ +
Sbjct: 387 PDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDL 446
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ-----------KGFDKCVV 236
+Q+IS G P VT ++++ C G A ++F MQ+ G + V
Sbjct: 447 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQ 506
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM----------------DMH 280
Y+ +++ G+ +A L +M +G PN Y+S++ D
Sbjct: 507 TYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSM 566
Query: 281 GRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
G + + T++S Y A D ++ + E G V D ++ F K+ I
Sbjct: 567 GSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNI 626
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 111/229 (48%), Gaps = 9/229 (3%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L + L + GR E + M E G+ + Y +++ I + A L ++ E
Sbjct: 181 FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKME 240
Query: 123 EKGMLR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKN----AELNISDCISCVIVNGFSK 177
E ++ ++ ++ ++ ++G + M+ +L +C+ ++GF
Sbjct: 241 EMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCM----IDGFCS 296
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ ++++ + P VTY+++INAY + + +AE+++ EM +G +
Sbjct: 297 SGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTIT 356
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
Y+SM+ + K R+ A + M KGC P+V+ +N+L+D + AK +
Sbjct: 357 YNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRI 405
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 139/352 (39%), Gaps = 64/352 (18%)
Query: 27 QIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRD 85
++ F++I E LF + SR L PS K++ + + R ++ ++
Sbjct: 47 KLRSGFHEIKGLEDAIDLFSDMVRSRPL---PSVIDFNKLM-GVVVRMERPDLVISLYQK 102
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M+ K I D + LI F S +++ A F + + G D+ F L+ E
Sbjct: 103 MERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDR 162
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
V + L++ M + ++NG + AV + ++++ G P Q+TY +
Sbjct: 163 VSEALDLFHQMCRPNV----VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 218
Query: 206 IINAYCRIG------------------------------------LYSKAEKVFIEMQQK 229
I++ C+IG +S A ++ EMQ+K
Sbjct: 219 IVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEK 278
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G + Y+ M+ + +GR +A RL+ +M + PNV Y++L
Sbjct: 279 GIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSAL------------- 325
Query: 290 EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
I+AY R+F + Y+E G + + M+ F K ++++
Sbjct: 326 ------INAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLD 371
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 100/226 (44%), Gaps = 15/226 (6%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS----- 58
+ L ++M S+G+ D +++ G + +F + K+DL S
Sbjct: 441 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNG 500
Query: 59 ---STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
Y IL L G+ E + +++M +GI+ + Y+S+I + + A
Sbjct: 501 VEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEAT 560
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-IVNG 174
++F K D+ F LV Y + G V+ LE+ M + ++D I+ + +++G
Sbjct: 561 QMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGI-VADAITYITLIHG 619
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
F K A+ +++++IS G P +T S++ L+SK E
Sbjct: 620 FRKVGNINGALDIFQEMISSGVYPDTITIRSMLTV-----LWSKEE 660
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 111/278 (39%), Gaps = 49/278 (17%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M G+V D+ Y ++ F +GD AAL L + + P +L D L
Sbjct: 413 HEMTETGLVADTTTYNTLIHGFCLVGDLN--AALDLSQQMISSGVCPDIVTCNTLL-DGL 469
Query: 71 GKSGRAFEILKFFRDMKE-----------KGILEDPSVYASLICSFASIAEVKVAEELFK 119
+G+ + L+ F+ M++ G+ D Y LI + + AEEL+K
Sbjct: 470 CDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYK 529
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E +G++ + + + +NG K+
Sbjct: 530 EMPHRGIVPNTITYSSM-----------------------------------INGLCKQS 554
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A ++++ + S+ P VT+ ++++ YC+ G ++F EM ++G + Y
Sbjct: 555 RLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYI 614
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+++ + K G I A+ + +M G P+ S++
Sbjct: 615 TLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSML 652
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 8/279 (2%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSS 59
+ +Q KL+ + K G V S Y I++ F+K G + + E CES ++P
Sbjct: 551 SETQDKLNNFIK---QGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCES---GISPDV 604
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
Y L D L KS + L+ DMK KG+ D Y++LI F + +++ A + F
Sbjct: 605 I-TYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFT 663
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E + G+ + V+ ++ +I +E L + + M ++ + I+ G K
Sbjct: 664 ELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEG 723
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+ +Y +++S+ +P V Y +IN G A K+ EM V+ Y+
Sbjct: 724 KLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYN 783
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++A + G +++A RL +M KG P+ Y+ L++
Sbjct: 784 ILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 822
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 4/285 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +MK GI + ++E F++ E LF E + ++ Y IL
Sbjct: 383 YTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI----TNVVTYNILLKW 438
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ G+ E + M KGI Y +LI + A + K E+G+ +
Sbjct: 439 LGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPN 498
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + ++G E+ V E M A + +D ++NG K
Sbjct: 499 AVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLN 558
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
I QG + +TY SII+ + + G A + EM + G V+ Y+S++ K+
Sbjct: 559 NFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSN 618
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTT 294
+I A+ + + MK KG + +V Y++L+D + ++ K+ T
Sbjct: 619 KIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFT 663
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 133/290 (45%), Gaps = 9/290 (3%)
Query: 10 YEKMKSA---GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
Y +KS G+ ++ Y +++ F+K GDSE+ +F + + ++ P+ H + +
Sbjct: 484 YSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAA--NIAPTD-HTFNTV 540
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ LGK+GR E + ++G + Y S+I F V A ++E E G+
Sbjct: 541 INGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGI 600
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ + + LE+ MK + + +++GF K +A K
Sbjct: 601 SPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASK 660
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ +L+ G P V Y S+I+ + + A + EM + + Y+S++
Sbjct: 661 FFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLL 720
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
K G++ A+ L ++M K P++ +Y L++ G + N QLE + ++
Sbjct: 721 KEGKLSLALDLYSEMLSKDIVPDIVMYTVLIN--GLSNN-GQLENASKIL 767
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 114/243 (46%), Gaps = 34/243 (13%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ E+ KFF++ K +G+ D + Y+ L+ + ++ +A EL KE E G +
Sbjct: 232 KEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKG 291
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ +++ +++G + L + + M + L ++ ++ ++ G+ A+++++++
Sbjct: 292 TYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEV 351
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--------------------- 230
+ G +P V ++ +IN ++G KA +++ M+ G
Sbjct: 352 VEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLL 411
Query: 231 ------FDKC-------VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
FD+ VV Y+ ++ G+ G++ +A L KM KG P++ YN+L+
Sbjct: 412 EHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLI 471
Query: 278 DMH 280
H
Sbjct: 472 LGH 474
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 119/289 (41%), Gaps = 37/289 (12%)
Query: 27 QIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Q + Y GD+ A +F+EC E S + ++ L S + + + ++ FR
Sbjct: 115 QFLLNNYVFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFR 174
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M E ++ + +L+ + V A +L+ E E+G+ D ++ ++EG
Sbjct: 175 TMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEG 234
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
E+ + + K L + ++V +R A ++ +++ G +P + TY
Sbjct: 235 KFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYT 294
Query: 205 SIINA-----------------------------------YCRIGLYSKAEKVFIEMQQK 229
++I A YC +G + A ++F E+ +
Sbjct: 295 AVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEG 354
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G VV +S ++ K G + A L +MK G +PNV+I NSL++
Sbjct: 355 GVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLE 403
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 93/207 (44%), Gaps = 3/207 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + MK G+ LD Y +++ F K+ D E + F E + LTP+ T +Y +
Sbjct: 624 LEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTEL--LDIGLTPN-TVVYNSM 680
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L ++M + + D VY S+I ++ +A +L+ E K +
Sbjct: 681 ISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDI 740
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ ++ L+ G +E ++++ M + S + +++ G + A +
Sbjct: 741 VPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFR 800
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRI 213
++++++ +G +P TY ++N ++
Sbjct: 801 LHDEMLDKGLVPDDTTYDILVNGKLKV 827
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 119/249 (47%), Gaps = 3/249 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L K+GR E K F M ++G+ + + Y +L+ +A+ + L
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ + VF L+ Y ++G V++ + V M+ LN ++ K
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ +EQ+I + PG + Y S+I++ C + KA+++ +EM +G + ++S++
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+ K GR+ ++ +L M G +PN+ Y++L+D + A + + K + + M
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 303 REFDMCVKF 311
+ CV +
Sbjct: 547 PD---CVTY 552
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 5/277 (1%)
Query: 3 SQSKLHYYEKMKSAG--IVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
SQ L + M G D Y ++ F+K GD +K + E R + P+
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGI--LPNVV 235
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y + +L K+ + ++ M + G++ + Y S++ + S + K A K+
Sbjct: 236 -TYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G+ D+ + L+ + G + ++ +SM L ++ G++ + A
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ + ++ G P ++ +I AY + G +A VF +M+Q+G + V Y +
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ + K+GR+ DAMR +M + P +YNSL+
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVI-----VNGFSKRRAYWAAVKVYEQLISQGC 196
+E ++ LE+++ M + + DC V+ +NGF K A Y +++ +G
Sbjct: 174 DENRSQEALELLQMMPD---DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGI 230
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
+P VTY SII A C+ KA +V M + G Y+S+V Y +G+ ++A+
Sbjct: 231 LPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIG 290
Query: 257 LVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQL 289
+ KM G EP+V YNSLMD +GR R++
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 5/255 (1%)
Query: 31 AFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKG 90
A+ K G ++ +F + R+ L P T Y + L KSGR + +++F M ++
Sbjct: 383 AYAKQGKVDQAMLVF--SKMRQQGLNPD-TVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 91 ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
+ VY SLI S + A+EL E ++G+ D F ++ + +EG V ++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
++ + M + + +++G+ A K+ ++S G P VTY ++IN Y
Sbjct: 500 KLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
C+I A +F EM+ G ++ Y+ ++ +T R A L + G + +
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619
Query: 271 WIYNSLMDMHGRAKN 285
YN + +HG KN
Sbjct: 620 STYNII--LHGLCKN 632
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 112/274 (40%), Gaps = 4/274 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + Y+E+M + + Y ++ + +K L LE R + L T +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFF 482
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ DS K GR E K F M G+ + Y++LI + ++ A +L
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
GM D + L+ Y + +E L + M+++ ++ +I+ G + R A
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++Y + G TY I++ C+ L +A ++F + ++ M+
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K GR +A L A + G P+V Y SLM
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTY-SLM 695
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 117/273 (42%), Gaps = 17/273 (6%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+M GI LD+ + I+++ K G +SEK+ L + ++ + P+ Y L D
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV-----RIGVKPNII-TYSTLID 522
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+G+ E K M G+ D Y +LI + I+ ++ A LF+E E G+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 129 DLEVFLKLV--LMYIEEGMVEKTLEV--VESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D+ + ++ L K L V ES EL+ + +I++G K A
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN----IILHGLCKNNLTDEA 638
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++++ L T+ +I A ++G +A+ +F + G V YS M
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAEN 698
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G + + L M+ GC N + NS++
Sbjct: 699 LIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 31/188 (16%)
Query: 178 RRAYWAAVKVYEQLISQGC---IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
R + AAV Y ++ G P TY +I + C G + +KGF
Sbjct: 66 RHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVD 125
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVA-KMKPKGCEPNVWIYNSLM----DMHGRAKNLRQL 289
+A++ ++ R DAM +V +M GC PNV+ YN L+ D + + L L
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185
Query: 290 E--------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+ YTTVI+ + + D Y+E ++DR GI+ V +
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE------MLDR---GILPNVVT 236
Query: 336 KLSQIEEL 343
S I L
Sbjct: 237 YNSIIAAL 244
>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 756
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 124/260 (47%), Gaps = 38/260 (14%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGIL-EDPSVYASLICSFASIAEVK 112
DL P H ++ + L + + L+FFR + G++ D + +I + ++
Sbjct: 109 DLVPEWDH--SLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVQKLN 166
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN--AELNI---SDCI 167
A + + EKG+ D ++F+ L+ Y + G+V++++++ + MK+ E I +
Sbjct: 167 HARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNTLF 226
Query: 168 SCVIVNG--------FSK---------RRAY----WA---------AVKVYEQLISQGCI 197
++ G F+K R Y W A++ ++ + ++G
Sbjct: 227 KVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRGIS 286
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P VTY +IIN YCR +AEK+F+EM+ + VV Y++M+ Y R+ D +R+
Sbjct: 287 PDAVTYNTIINGYCRFKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSVDRVDDGLRI 346
Query: 258 VAKMKPKGCEPNVWIYNSLM 277
+M+ G EPN Y++L+
Sbjct: 347 FEEMRSFGIEPNATTYSTLL 366
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 121/274 (44%), Gaps = 17/274 (6%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
++ L +++ MK+ GI D+ Y I+ + + ++ LF+E + + S Y
Sbjct: 271 ETALRFFDDMKTRGISPDAVTYNTIINGYCRFKKMDEAEKLFVEMKGNN---SEPSVVTY 327
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ R + L+ F +M+ GI + + Y++L+ + ++ A+ + K
Sbjct: 328 TTMIKGYLSVDRVDDGLRIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVEAKNILKNMMA 387
Query: 124 KGML-RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
K + +D +FLKL++ + G + EV+++M + V++ K AY
Sbjct: 388 KHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYN 447
Query: 183 AAVKVYEQLISQGCI----------PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
A+K+ + LI + I P Y II C G +KAE +F ++ ++G
Sbjct: 448 RAIKLLDTLIEKEIILRHQDTLEMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLMKRGV- 504
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
+ A ++++ + K G + ++ M +G
Sbjct: 505 QDQDALNNLIRGHAKEGNPESSYEILKIMSRRGV 538
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 89/212 (41%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P M+ +L +S GK+G E +K F+ MK+ G+ Y +L +A+
Sbjct: 181 PWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNTLFKVILRRGRYMMAKR 240
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
F + +G+ + ++ + +E L + MK ++ I+NG+
Sbjct: 241 YFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRGISPDAVTYNTIINGYC 300
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ + A K++ ++ P VTY ++I Y + ++F EM+ G +
Sbjct: 301 RFKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSVDRVDDGLRIFEEMRSFGIEPNAT 360
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
YS+++ G++ +A ++ M K P
Sbjct: 361 TYSTLLPGLCDVGKMVEAKNILKNMMAKHIAP 392
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 42/302 (13%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCDSL 70
M G+ + Y ++++ + +GD +K + R +L +T + K CDS
Sbjct: 586 MGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT-IIKGYCDS- 643
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G + A IL RD G D Y LIC F I++++ A LF E + G+ +
Sbjct: 644 GNTTSALRILDLMRD---GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNE 700
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA------ 184
+ L+ Y ++ ++ ++E MK + + V+++G +K+ + A
Sbjct: 701 VTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 760
Query: 185 -----------------------------VKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
++++ ++I QGC+P +TY+S+I A + G
Sbjct: 761 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 820
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+AE +F E+++ G + Y M+ Y +G++ A + +M GC+P +W Y
Sbjct: 821 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 880
Query: 276 LM 277
L+
Sbjct: 881 LI 882
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 97/217 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L + G ++ + M +G+ + +Y ++I + V AE + K+
Sbjct: 353 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 412
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E M D + ++L + + ++ L+V M + ++NG
Sbjct: 413 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 472
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + ++I G +P T I A C +G Y A ++F++M+ KG + V Y++++
Sbjct: 473 EAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALI 532
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ +G ++ A+ L +M G PN YN+L+++
Sbjct: 533 SGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 569
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+T Y L + L SGR E R+M GIL I + + + A L
Sbjct: 453 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 512
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F + + KG ++ + L+ G+++ + + M + + ++N +
Sbjct: 513 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 572
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
R A V + G VTY +I YC +G KA V M Q+G +V
Sbjct: 573 NRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 632
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y++++ Y +G A+R++ M+ GC+P+ W Y L+
Sbjct: 633 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 672
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+ F + + G+ Y++L+ + + + + +G+ +L ++ ++
Sbjct: 335 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 394
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
++G V +++ + +E++ ++ G ++ +A++V+ Q+ +GC P
Sbjct: 395 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 454
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY+++IN C G ++A + EM G + + G DA RL
Sbjct: 455 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 514
Query: 260 KMKPKGCEPNVWIYNSLM 277
MK KGCEPNV+ Y +L+
Sbjct: 515 DMKNKGCEPNVYTYTALI 532
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 114/281 (40%), Gaps = 38/281 (13%)
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
AF +L M G+ + Y +I + + + K A + ++G +L +
Sbjct: 579 AFVVLNL---MGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 635
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
++ Y + G L +++ M++ + ++ GF K +A ++ +++ G
Sbjct: 636 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 695
Query: 196 CIPGQVTYASIINAYCR------------------------------IGL-----YSKAE 220
P +VTY ++I+ YC+ GL +S AE
Sbjct: 696 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 755
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
++ M ++G VV Y++M+ K G A+ + KM +GC PN+ Y+SL+
Sbjct: 756 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 815
Query: 281 GRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
G+ + + E + + + + VK + M+G V
Sbjct: 816 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 856
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 19/228 (8%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D L K+G L+ F M E+G L + Y+SLI + +V+ AE LF E E
Sbjct: 773 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 832
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G++ D ++K++ YI G VE + M A + V++ G + Y
Sbjct: 833 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL--KNEYL 890
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK--GFDK--CVVAY 238
A +Q ++ +P V C G + + M K D V
Sbjct: 891 LA----DQRLAA--LPDVV-------PNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 937
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+++V+ GR +A L+ M +G P+ YNSL+ R +N+
Sbjct: 938 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNV 985
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 119/298 (39%), Gaps = 20/298 (6%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y + ++L K G + + + E + D Y S+I ++ A ++F +
Sbjct: 387 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 446
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRR 179
++G + + L+ + G V + +++ M C +I
Sbjct: 447 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA--LCDMG 504
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
Y A +++ + ++GC P TY ++I+ C GL A +F M + G V Y+
Sbjct: 505 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 564
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAK-------NLRQ- 288
+++ + + RI+ A ++ M G N+ YN ++ + G K N+ Q
Sbjct: 565 ALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 624
Query: 289 -----LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
L Y T+I Y + ++ + R G D ++ F K+S++E
Sbjct: 625 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 682
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 33 YKIGDSEKVAALFLECESRKLDLTPS-STHMYKILCDSLGKSGRAFEILKFFRDMKEKGI 91
Y+ D + V+ + ++ +L P S + L +L +GR FE + M +G+
Sbjct: 910 YQTTDQDAVSVM----SAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGL 965
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D Y SL+CS + V +A +FK +G L + +L+ + ++
Sbjct: 966 CPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARI 1025
Query: 152 VVESMKNAELNISDCISCVIVNGF 175
E+M N D + V+++G
Sbjct: 1026 TFENMLMRTWNPDDVVQAVLIDGL 1049
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 145/335 (43%), Gaps = 49/335 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ + Y I++ K+GD+ V+AL L + +L +Y + D L
Sbjct: 105 DRMVEDGLQPNQITYGTIVDGMCKMGDT--VSALNLLRKMEELSHIKPDVVIYSAIIDGL 162
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR + F +M++KGI D Y+ +I F S + A+ L +E + + D+
Sbjct: 163 WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDV 222
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISC------------------- 169
F L+ ++EG + ++++ M ++ + N+ C +
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282
Query: 170 -------------------------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++++G + A ++YE++ +G +P VTY+
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+IN C+ +A ++F M K F +V +++++ Y K G + D + L +M +
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR 402
Query: 265 GCEPNVWIYNSLMDMHGRAKNLR-QLEKYTTVISA 298
G N Y +L+ + N+ L+ + +IS+
Sbjct: 403 GIVANAITYITLIRGFRKVGNINGSLDIFQEMISS 437
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 125/294 (42%), Gaps = 15/294 (5%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ + +M+ GI D Y ++ F G + L E RK+ +P + L
Sbjct: 173 NLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKI--SPDVV-TFSGLI 229
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE---- 123
++L K G ++M G+ + +L+ ++K A E+FK ++
Sbjct: 230 NALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMD 289
Query: 124 -------KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
G+ D++ + L+ I EG + E+ E M + + ++NG
Sbjct: 290 IDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLC 349
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K+ A ++++ + S+ P VT+ ++I YC+ G+ ++F EM ++G +
Sbjct: 350 KQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAI 409
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN-VWIYNSLMDMHGRAKNLRQL 289
Y +++ + K G I ++ + +M G P+ + I N L + + + R L
Sbjct: 410 TYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAL 463
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 5/179 (2%)
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
LI F S +++ A F + + G L F L+ E V + L++ M
Sbjct: 21 LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPN 80
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
+ ++NG + AV + ++++ G P Q+TY +I++ C++G A
Sbjct: 81 V----VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136
Query: 221 KVFIEMQQKGFDKC-VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +M++ K VV YS+++ K GR DA L +M+ KG P++ Y+ +++
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMIN 195
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L Q C P VT+ +++N CR G +A + M + G + Y ++V K G
Sbjct: 71 DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130
Query: 250 RIRDAMRLVAKMKP-KGCEPNVWIYNSLMD------MHGRAKNL 286
A+ L+ KM+ +P+V IY++++D H A+NL
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNL 174
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ ++ Y ++ + G + +AL E S+K+ P Y IL D L
Sbjct: 259 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM--VPDG-FTYSILFDGL 315
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G + +L F + G+ + L+ +V +AEE+ + G++
Sbjct: 316 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 375
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
++ L+ Y + G +E MK+ + ++NG K A + +
Sbjct: 376 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 435
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P T+ ++I+AY R G K V EMQ+ G VV+Y S+V + K G+
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 495
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
I +A+ ++ M K PN +YN+++D
Sbjct: 496 IPEAVAILDDMFHKDVLPNAQVYNAIID 523
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 122/276 (44%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MKS I D Y ++ K L +E + ++ T + L D+
Sbjct: 398 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT---VETFNTLIDA 454
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G++G+ + +M+E G+ + Y S++ +F ++ A + + K +L +
Sbjct: 455 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 514
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+V+ ++ Y+E G ++ +VE MK+ ++ S +++ G + A ++
Sbjct: 515 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 574
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L + IP V+Y ++I+A C G KA + M + G V Y +++ G G
Sbjct: 575 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 634
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
R+ + L KM P+ I+N +++ + + N
Sbjct: 635 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 670
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 125/288 (43%), Gaps = 41/288 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M ++ + Y +++ K GD E A L + L P++ Y +L
Sbjct: 223 FDEMTERAVLPNHITYNTMIDGHIKGGDLE--AGFRLRDQMVCHGLKPNAI-TYNVLLSG 279
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++GR E +M + ++ D Y+ L + L + + K ML
Sbjct: 280 LCRAGRMGETSALLDEMASQKMVPDGFTYSILF------------DGLSRNGDSKAML-- 325
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+F K Y++ G+ I D +++NG K A +V +
Sbjct: 326 -SLFGK----YLKNGVT----------------IGDYTCSILLNGLCKDGKVSIAEEVLQ 364
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L++ G +P +V Y ++IN YC+ G A F +M+ + + Y++++ K
Sbjct: 365 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 424
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
RI +A L+ +M+ G P V +N+L+D +GR QLEK V+S
Sbjct: 425 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG---QLEKCFIVLS 469
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 17/298 (5%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L P+ +Y L + ++G F MK + I D Y +LI + A
Sbjct: 371 LVPTRV-IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 429
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
++L E ++ G+ +E F L+ Y G +EK V+ M+ L + IVN
Sbjct: 430 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 489
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K AV + + + + +P Y +II+AY G +A + +M+ G
Sbjct: 490 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 549
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HG---RAKNLRQ 288
+V Y+ ++ +I +A ++ + P+ YN+L+ G +A +L+Q
Sbjct: 550 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 609
Query: 289 ----------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+ Y +IS A + Y + N V A+ IMV +SK
Sbjct: 610 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 667
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 90/218 (41%), Gaps = 3/218 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ G+ + Y I+ AF K G + A+ + + D+ P++ +Y + D+
Sbjct: 470 EMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK--DVLPNA-QVYNAIIDAYV 526
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G + MK GI Y LI + +++ AEE+ ++ D
Sbjct: 527 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 586
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ G ++K L++ + M + + +++G +Y+++
Sbjct: 587 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 646
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+ +P + ++ AY + G KAE + EM QK
Sbjct: 647 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684
>gi|255661034|gb|ACU25686.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 376
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 137/274 (50%), Gaps = 10/274 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM--YKILC 67
Y++M + + D+ Y ++ ++++G + L+ +L T ++ + I+
Sbjct: 13 YKEMVESKMSPDAVVYNAMLNGYFRVGRIKDCFELW------ELMGTEGGQNVISFNIMM 66
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
L +G + + + MK+ G +ED + +A LI F + + + + AEEKG +
Sbjct: 67 RGLFNNGEVDKAISIWELMKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLEIAEEKGGV 126
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + ++ E ++K V+ M + + +++NGF ++ A++V
Sbjct: 127 LNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGFVGASKFYDAIRV 186
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++++ S C P VTY ++IN C+ +++A + EM +KG+ CV+ YS ++ +
Sbjct: 187 FQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLIKGLCQ 246
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ A++L ++ KG +P+V ++N L +HG
Sbjct: 247 GHKVEMAIQLWNQVISKGLKPDVQMHNIL--IHG 278
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 112/265 (42%), Gaps = 3/265 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E MK +G V DS + +++ F K G K + E + L + Y + +
Sbjct: 82 WELMKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLEIAEEKGGVL---NAFAYSAMING 138
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + + + M + G + VY LI F ++ A +F+E
Sbjct: 139 LCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGFVGASKFYDAIRVFQEMGSTDCSPT 198
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + ++V+ M +++ G + A++++
Sbjct: 199 IVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLIKGLCQGHKVEMAIQLWN 258
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+IS+G P + +I+ C +G A ++ +M + +V +++++ + K G
Sbjct: 259 QVISKGLKPDVQMHNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDG 318
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYN 274
IR+A+ + A++ G +P++ YN
Sbjct: 319 DIRNALVIWARILRNGLQPDIVSYN 343
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 108/215 (50%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L + + K GR E +KF +M G + + ++ S S AE+L +
Sbjct: 289 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML 348
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + F L+ +G++ + ++++E M + +++GF K +
Sbjct: 349 RKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMD 408
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ + ++S+GC P VTY +++ A C+ G A ++ ++ KG ++ Y++++
Sbjct: 409 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVI 468
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G+ A++L+ +M+ KG +P++ Y+SL+
Sbjct: 469 DGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 503
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 5/209 (2%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++G + KF M +G + D SLI F I + K A + + E+ G + D
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY 188
+ + L+ Y + G ++ L+V++ M A D ++ I+ A++V
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRMNVA----PDVVTYNTILRTLCDSGKLKQAMEVL 239
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ + + C P +TY +I A C+ +A K+ EM+ KG VV Y+ ++ K
Sbjct: 240 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 299
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ +A++ + M GC+PNV +N ++
Sbjct: 300 GRLDEAIKFLNNMPSYGCQPNVITHNIIL 328
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 136/329 (41%), Gaps = 26/329 (7%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAAL--FLECESRKLDLTPSSTHMYKIL 66
+ E M G + D ++ F +IG ++K + LE D+ Y +L
Sbjct: 136 FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI-----TYNVL 190
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
KSG L+ M + D Y +++ + ++K A E+ +K
Sbjct: 191 ISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC 247
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ +E V + +++++ M+N V++NG K A+K
Sbjct: 248 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIK 307
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ S GC P +T+ I+ + C G + AEK+ +M +KG VV ++ ++
Sbjct: 308 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 367
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLE--------------- 290
+ G + A+ ++ KM GC PN YN L+ + K + R +E
Sbjct: 368 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 427
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y T+++A + D+ V+ N+ G
Sbjct: 428 TYNTLLTALCKDGKVDVAVEILNQLSSKG 456
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K E ++ +G IP + S+I +CRIG KA V ++Q G V+ Y+ +++ Y
Sbjct: 135 KFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGY 194
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNL-----RQLEK------ 291
K+G I +A++++ +M P+V YN+++ G+ K RQL+K
Sbjct: 195 CKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDV 251
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I A +K +E R G D +++ K +++E
Sbjct: 252 ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 304
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G GRA +IL+ M G + Y L+ F ++ A E +G D+
Sbjct: 370 GLLGRAIDILE---KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 426
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ ++G V+ +E++ + + + +++G SK A+K+ ++
Sbjct: 427 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 486
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G P +TY+S+++ R G +A K F +++ G + Y+S++ K+ +
Sbjct: 487 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 546
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A+ +A M K C+P Y L++
Sbjct: 547 TDRAIDFLAYMISKRCKPTEATYTILIE 574
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 85/210 (40%), Gaps = 1/210 (0%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP+S Y L K + +++ M +G D Y +L+ + +V VA
Sbjct: 388 TPNSLS-YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 446
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
E+ + KG L + ++ + G E+ +++++ M+ L +V+G
Sbjct: 447 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 506
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
S+ A+K + L G P +TY SI+ C+ +A M K
Sbjct: 507 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 566
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
Y+ ++ G ++A+ L+ ++ +G
Sbjct: 567 ATYTILIEGIAYEGLAKEALDLLNELCSRG 596
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 71/171 (41%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L +L K G+ ++ + KG Y ++I + + + + A +L E
Sbjct: 429 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 488
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + LV EG V++ ++ ++ + + I+ G K R
Sbjct: 489 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 548
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
A+ +IS+ C P + TY +I GL +A + E+ +G K
Sbjct: 549 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVK 599
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 108/215 (50%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L + + K GR E +KF +M G + + ++ S S AE+L +
Sbjct: 232 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML 291
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + F L+ +G++ + ++++E M + +++GF K +
Sbjct: 292 RKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMD 351
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ + ++S+GC P VTY +++ A C+ G A ++ ++ KG ++ Y++++
Sbjct: 352 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVI 411
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G+ A++L+ +M+ KG +P++ Y+SL+
Sbjct: 412 DGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 446
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 136/329 (41%), Gaps = 26/329 (7%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAAL--FLECESRKLDLTPSSTHMYKIL 66
+ E M G + D ++ F +IG ++K + LE D+ Y +L
Sbjct: 79 FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI-----TYNVL 133
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
KSG L+ M + D Y +++ + ++K A E+ +K
Sbjct: 134 ISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC 190
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ +E V + +++++ M+N V++NG K A+K
Sbjct: 191 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIK 250
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ S GC P +T+ I+ + C G + AEK+ +M +KG VV ++ ++
Sbjct: 251 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 310
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLE--------------- 290
+ G + A+ ++ KM GC PN YN L+ + K + R +E
Sbjct: 311 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 370
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y T+++A + D+ V+ N+ G
Sbjct: 371 TYNTLLTALCKDGKVDVAVEILNQLSSKG 399
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 5/209 (2%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++G + KF M +G + D SLI F I + K A + + E+ G + D
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY 188
+ + L+ Y + G ++ L+V++ M A D ++ I+ A++V
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRMNVA----PDVVTYNTILRTLCDSGKLKQAMEVL 182
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ + + C P +TY +I A C+ +A K+ EM+ KG VV Y+ ++ K
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 242
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ +A++ + M GC+PNV +N ++
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHNIIL 271
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K E ++ +G IP + S+I +CRIG KA V ++Q G V+ Y+ +++ Y
Sbjct: 78 KFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGY 137
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNL-----RQLEK------ 291
K+G I +A++++ +M P+V YN+++ G+ K RQL+K
Sbjct: 138 CKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDV 194
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I A +K +E R G D +++ K +++E
Sbjct: 195 ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 247
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G GRA +IL+ M G + Y L+ F ++ A E +G D+
Sbjct: 313 GLLGRAIDILE---KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 369
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ ++G V+ +E++ + + + +++G SK A+K+ ++
Sbjct: 370 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 429
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G P +TY+S+++ R G +A K F +++ G + Y+S++ K+ +
Sbjct: 430 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 489
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A+ +A M K C+P Y L++
Sbjct: 490 TDRAIDFLAYMISKRCKPTEATYTILIE 517
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 85/210 (40%), Gaps = 1/210 (0%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP+S Y L K + +++ M +G D Y +L+ + +V VA
Sbjct: 331 TPNSLS-YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 389
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
E+ + KG L + ++ + G E+ +++++ M+ L +V+G
Sbjct: 390 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 449
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
S+ A+K + L G P +TY SI+ C+ +A M K
Sbjct: 450 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 509
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
Y+ ++ G ++A+ L+ ++ +G
Sbjct: 510 ATYTILIEGIAYEGLAKEALDLLNELCSRG 539
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 71/171 (41%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L +L K G+ ++ + KG Y ++I + + + + A +L E
Sbjct: 372 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 431
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + LV EG V++ ++ ++ + + I+ G K R
Sbjct: 432 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 491
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
A+ +IS+ C P + TY +I GL +A + E+ +G K
Sbjct: 492 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVK 542
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H +L +SL K + K ++ M + G++ + VY L+ + +V+ AE++ E
Sbjct: 172 HACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSE 231
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
E K + DL + L+ +Y ++GM + L V + M+ A ++ ++ GF +
Sbjct: 232 MELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGR 291
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AV+++ + + P VTY S+I+ YCR+ +A ++ M +KG V+ Y+S
Sbjct: 292 MREAVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNS 349
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
++ + GR+RDA L+ +M + EP+ N+L++ + + ++R
Sbjct: 350 ILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMR 396
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
V LV++Y M + ++V E M+ V++N +K R K+Y++
Sbjct: 137 HVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKK 196
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G + Y +++A C+ G KAEKV EM+ K + Y++++++Y K G
Sbjct: 197 MVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGM 256
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEK-----------YTTVI 296
+A+ + +M+ G P+++ YNSL+ GR + QL + YT++I
Sbjct: 257 HYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIKDVTPNHVTYTSLI 316
Query: 297 SAYNMAREFDMCVKF 311
Y + D ++
Sbjct: 317 DGYCRVNDLDEALRL 331
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 5/266 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+ AGI D Y ++ F + G + LF + + D+TP+ Y L D
Sbjct: 265 DRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIK----DVTPNHV-TYTSLIDGY 319
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ E L+ M EKG+ Y S++ ++ A L E E+ + D
Sbjct: 320 CRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDN 379
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
L+ Y + G + L+V + M A L + +++GF K + A ++
Sbjct: 380 VTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFG 439
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G P TY+ ++++YC+ K+ E+ ++G V Y +++ + K +
Sbjct: 440 MMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCKIEK 499
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSL 276
I A R++ MK KG + +Y SL
Sbjct: 500 IDCAQRVLGLMKDKGIFGDSVVYTSL 525
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 36/301 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+KM G+V + Y ++ A K GD EK + E E L Y L
Sbjct: 194 YKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEME---LKCVFPDLFTYNTLISL 250
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE------ 123
K G +E L M+ GI D Y SLI F ++ A +LF++ ++
Sbjct: 251 YCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIKDVTPNHV 310
Query: 124 ------KGMLR--DLEVFLKLVLMYIEEGMVEKTL-------EVVESMKNAELNI----- 163
G R DL+ L+L + E+G+ + ++ E + + NI
Sbjct: 311 TYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEM 370
Query: 164 ------SDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
D ++C ++N + K +A+KV ++++ G Q TY ++I+ +C+
Sbjct: 371 SERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEI 430
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
KA+++ M GF YS +V Y K ++L ++ +G +V +Y +L
Sbjct: 431 DKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRAL 490
Query: 277 M 277
+
Sbjct: 491 I 491
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 37/239 (15%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
++H+ L G S E ++ F M+ G L+ S A +++
Sbjct: 135 NSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIY 194
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
K+ + G++ ++ V+ L+ + G VEK +V+ M+ + CV
Sbjct: 195 KKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEME---------LKCVF------- 238
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
P TY ++I+ YC+ G++ +A V M+ G + Y
Sbjct: 239 -------------------PDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTY 279
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+S++ + + GR+R+A++L + K PN Y SL+D + R +L + + V+S
Sbjct: 280 NSLIYGFCREGRMREAVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMS 336
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 116/252 (46%), Gaps = 3/252 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ + ++ D ++ AL L+ + L P+ Y + L + GR +
Sbjct: 312 YTSLIDGYCRVNDLDE--ALRLKEVMSEKGLYPTVI-TYNSILRKLCEGGRLRDANILLN 368
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M E+ I D +LI ++ I +++ A ++ + G+ D + L+ + +
Sbjct: 369 EMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAK 428
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++K E++ M +A + S C +V+ + K++ A +K+ ++L+ +G Y
Sbjct: 429 EIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYR 488
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++I +C+I A++V M+ KG V Y+S+ Y K G++ ++ +M K
Sbjct: 489 ALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVNVTSDILDEMYKK 548
Query: 265 GCEPNVWIYNSL 276
+ IY S
Sbjct: 549 RLMITLKIYRSF 560
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 3/161 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S L +KM AG+ LD Y ++ F K + +K L +PS Y
Sbjct: 396 RSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDA--GFSPSYC-TY 452
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L DS K ++K ++ +G+ D SVY +LI F I ++ A+ + ++
Sbjct: 453 SWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKD 512
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS 164
KG+ D V+ L Y + G V T ++++ M L I+
Sbjct: 513 KGIFGDSVVYTSLAYGYWKVGKVNVTSDILDEMYKKRLMIT 553
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 145/335 (43%), Gaps = 49/335 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ + Y I++ K+GD+ V+AL L + +L +Y + D L
Sbjct: 105 DRMVEDGLQPNQITYGTIVDGMCKMGDT--VSALNLLRKMEELSHIKPDVVIYSAIIDGL 162
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR + F +M++KGI D Y+ +I F S + A+ L +E + + D+
Sbjct: 163 WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDV 222
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISC------------------- 169
F L+ ++EG + ++++ M ++ + N+ C +
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282
Query: 170 -------------------------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++++G + A ++YE++ +G +P VTY+
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+IN C+ +A ++F M K F +V +++++ Y K G + D + L +M +
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR 402
Query: 265 GCEPNVWIYNSLMDMHGRAKNLR-QLEKYTTVISA 298
G N Y +L+ + N+ L+ + +IS+
Sbjct: 403 GIVANAITYITLIRGFRKVGNINGSLDIFQEMISS 437
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 116/274 (42%), Gaps = 14/274 (5%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ + +M+ GI D Y ++ F G + L E RK+ +P + L
Sbjct: 173 NLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKI--SPDVV-TFSGLI 229
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE---- 123
++L K G ++M G+ + +L+ ++K A E+FK ++
Sbjct: 230 NALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMD 289
Query: 124 -------KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
G+ D++ + L+ I EG + E+ E M + + ++NG
Sbjct: 290 IDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLC 349
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K+ A ++++ + S+ P VT+ ++I YC+ G+ ++F EM ++G +
Sbjct: 350 KQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAI 409
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
Y +++ + K G I ++ + +M G P+
Sbjct: 410 TYITLIRGFRKVGNINGSLDIFQEMISSGVYPDT 443
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL L G+ E + + +M +GI+ D Y+S+I + + A ++F
Sbjct: 306 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMG 365
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
K ++ F L+ Y + GMV+ LE+ M + + ++ GF K
Sbjct: 366 SKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNIN 425
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
++ +++++IS G P +T +++ GL+SK E
Sbjct: 426 GSLDIFQEMISSGVYPDTITIRNMLT-----GLWSKEE 458
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 5/179 (2%)
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
LI F S +++ A F + + G L F L+ E V + L++ M
Sbjct: 21 LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPN 80
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
+ ++NG + AV + ++++ G P Q+TY +I++ C++G A
Sbjct: 81 V----VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136
Query: 221 KVFIEMQQKGFDKC-VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +M++ K VV YS+++ K GR DA L +M+ KG P++ Y+ +++
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMIN 195
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L Q C P VT+ +++N CR G +A + M + G + Y ++V K G
Sbjct: 71 DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130
Query: 250 RIRDAMRLVAKMKP-KGCEPNVWIYNSLMD------MHGRAKNL 286
A+ L+ KM+ +P+V IY++++D H A+NL
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNL 174
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 134/289 (46%), Gaps = 6/289 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ K+G + L + + L + MY + DS+ K E +
Sbjct: 146 YGTLINGLCKVGQARAALQLLRRVDGK---LVQPNVVMYNTIIDSMCKVKLVNEAFDLYS 202
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M +GI D Y++LI F + ++K A +LF + + + D+ F LV + ++G
Sbjct: 203 EMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDG 262
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ V M + + C +++G+ + A ++ + G P +Y
Sbjct: 263 KMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYN 322
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+IN +C+I +A +F +M K VV Y+S++ K+G+I A++LV +M +
Sbjct: 323 IMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDR 382
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYN 313
G P++ Y+S++D KN Q++K +++ D+ VK YN
Sbjct: 383 GVPPDIITYSSILD--ALCKN-HQVDKAIALLTKLKDQVFEDLFVKGYN 428
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 133/276 (48%), Gaps = 19/276 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
Y +M S GI D Y ++ F+ +G + LF + E+ K D+ + + IL
Sbjct: 201 YSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDV-----YTFNILV 255
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D K G+ E F M ++GI + Y SL+ + + +V A +F + G+
Sbjct: 256 DGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVN 315
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAV 185
D + + ++ + + V++ + + + M KN N+ S +++G K A+
Sbjct: 316 PDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTS--LIDGLCKSGKISYAL 373
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCR-------IGLYSK-AEKVFIEMQQKGFDKCVVA 237
K+ +++ +G P +TY+SI++A C+ I L +K ++VF ++ KG++ V A
Sbjct: 374 KLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYA 433
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
Y+ M+ + G +A+ L++KM+ G P+ Y
Sbjct: 434 YTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTY 469
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
I+ K Y A+ ++ Q+ +G VT +IN + ++G + VF + +KG
Sbjct: 66 ILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKG 125
Query: 231 FDKCVVAYSSMV------AMYG-------KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+D V+ ++++ YG K G+ R A++L+ ++ K +PNV +YN+++
Sbjct: 126 YDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTII 185
Query: 278 DMHGRAK 284
D + K
Sbjct: 186 DSMCKVK 192
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 94/230 (40%), Gaps = 11/230 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M GI + YC +M+ + + K ++F ++ T Y I+ +
Sbjct: 271 FAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVN---PDTQSYNIMING 327
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K + E + F+ M K I+ + Y SLI ++ A +L E ++G+ D
Sbjct: 328 FCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPD 387
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--------NISDCISCVIVNGFSKRRAY 181
+ + ++ + V+K + ++ +K+ N+ V++ GF + +
Sbjct: 388 IITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLF 447
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A+ + ++ G IP TY II + + AEK+ EM +G
Sbjct: 448 NEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/237 (17%), Positives = 95/237 (40%), Gaps = 64/237 (27%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPG-------------QVTYASIINAYCRIG-- 214
+++N FS+ + V+ ++ +G P +V+Y ++IN C++G
Sbjct: 100 ILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQA 159
Query: 215 ---------------------------------LYSKAEKVFIEMQQKGFDKCVVAYSSM 241
L ++A ++ EM +G VV YS++
Sbjct: 160 RAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSAL 219
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ------------- 288
++ + G+++DA+ L KM + +P+V+ +N L+D + +++
Sbjct: 220 ISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 279
Query: 289 ---LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ Y +++ Y + ++ + +N G D IM+ F K+ +++E
Sbjct: 280 KPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDE 336
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L K E + + R M +G L D Y ++I + I+ V+ A EL K+A
Sbjct: 258 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 317
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + D + L+ EG VE+ LE+ + + + +V G +
Sbjct: 318 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 377
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++V ++ +GC P TY +IN C++G S A V + KG+ V +++++
Sbjct: 378 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 437
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y K ++ A++LV +M G P+ YNS+++
Sbjct: 438 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 473
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 143/330 (43%), Gaps = 51/330 (15%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D K E + +D KG + D Y SLI + +V+ A ELF EA+
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 352
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK----NAEL--------------NIS 164
KG+ D+ V+ LV +G++ L+V+ M + ++ NIS
Sbjct: 353 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 412
Query: 165 DCISCV-----------------IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
D + +++G+ KR +A+++ E++ G P +TY S++
Sbjct: 413 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 472
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N C+ G ++ + F EM KG + Y+ ++ + ++ ++ +A +++ KM +G
Sbjct: 473 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 532
Query: 268 PNVWIYNSLM-------DMHGRAKNLRQLEK---------YTTVISAYNMAREFDMCVKF 311
P+ +N+L+ D+ G ++LE+ + T+I A++ M K
Sbjct: 533 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 592
Query: 312 YNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
++E G D +++ K + ++
Sbjct: 593 FDEMLSKGHRADSYTYRVLIDGSCKTANVD 622
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 12/258 (4%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
YC ++ Y G + LF + + P+ K+L +L K G E
Sbjct: 154 YCTVVCGLYAHGHTHDARQLFDQM--LHTHVFPNLAAFNKVL-HALCKRGDVLEAGLLLG 210
Query: 85 DMKEKGI---LEDPSVYASLICSFASIAE-VKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ ++G+ L +++ +C + E V++ + + A + D+ + L+
Sbjct: 211 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA-----VPDVVTYNTLIRGL 265
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
++ M ++ + + M N D I++G+ K A ++ + + +G +P Q
Sbjct: 266 CKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQ 325
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY S+IN C G +A ++F E Q KG +V Y+S+V G I A++++ +
Sbjct: 326 VTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNE 385
Query: 261 MKPKGCEPNVWIYNSLMD 278
M +GC P++ YN +++
Sbjct: 386 MAEEGCHPDIQTYNIVIN 403
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 96/213 (45%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
T Y + + L K+G+ E+ + F++M KG +P Y LI +F +++ A ++
Sbjct: 463 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 522
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+ ++G+ D F L+ + G +E + + ++ + + ++ FS
Sbjct: 523 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 582
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A K++++++S+G TY +I+ C+ +A +EM +KGF +
Sbjct: 583 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMST 642
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ ++ R+ A+ ++ M G P V
Sbjct: 643 FGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 675
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 117/334 (35%), Gaps = 77/334 (23%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCDSLGKSG 74
G V D YC ++ GD E+ LF E +++ K D+ +Y L L G
Sbjct: 320 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV-----VYNSLVKGLCLQG 374
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
L+ +M E+G D Y +I + + A + +A KG L D+ F
Sbjct: 375 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 434
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ Y + ++ L++VE M + ++NG K + ++++I +
Sbjct: 435 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 494
Query: 195 GCIPGQVT-----------------------------------YASIINAYCRIG----- 214
GC P +T + ++I +CR G
Sbjct: 495 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 554
Query: 215 --LYSK----------------------------AEKVFIEMQQKGFDKCVVAYSSMVAM 244
L+ K AEK+F EM KG Y ++
Sbjct: 555 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 614
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KT + A + +M KG P++ + +++
Sbjct: 615 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 648
>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
Length = 820
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 5/280 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + +MK G+ D Y ++ + G+ + +F E K ++ P
Sbjct: 414 NMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEE--MLKANIEPDIV- 470
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL KSG E+ M ++G+ + Y I F + AE LF
Sbjct: 471 TYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVV 530
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-IVNGFSKRRA 180
EEKG+ ++ +V Y+ G + + + + N+ D SC ++N +
Sbjct: 531 EEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVAR-QGNLVDHFSCSKLINDLCRVGN 589
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A V + ++ +P ++Y+ +I+ YC+ G KA F +M Q+G V+ Y+
Sbjct: 590 VQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTI 649
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
++ Y K GR+++A +L +M G +P+V Y L+D H
Sbjct: 650 LMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGH 689
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 151/357 (42%), Gaps = 54/357 (15%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + +YE M S GI + +++ F K+G + + A FL+ + L L
Sbjct: 344 NLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKV--- 400
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y I D+ K+G E +K +MK G+ D Y LI + E++ A+++F+E
Sbjct: 401 IYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEM 460
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ + D+ + L + + G+V + ++++ M +
Sbjct: 461 LKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMAD----------------------- 497
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
QG P +TY I +CR G S+AE +F +++KG D V YSSM
Sbjct: 498 ------------QGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSM 545
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR--------QLEK-- 291
V Y +G A L ++ +G + + + L++ R N++ LE
Sbjct: 546 VCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDV 605
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ +IS Y + D ++++ G +D + I++ + K +++E
Sbjct: 606 VPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQE 662
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 122/290 (42%), Gaps = 3/290 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +M G+ D+ Y + G + + E K+ P Y ++
Sbjct: 244 LQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKV---PVEAMAYNMV 300
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K R E K + +G D Y+ LI S+ + + A + ++ G+
Sbjct: 301 MDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGI 360
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + + GM + + K++ L++ I + ++ + K AVK
Sbjct: 361 ETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVK 420
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ G P ++ Y +I+ YC G A++VF EM + + +V Y+ + + +
Sbjct: 421 LLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFC 480
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
K+G + + L+ +M +G EPN Y + R NL + E V+
Sbjct: 481 KSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVV 530
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 22/240 (9%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q + + M +V D Y +++ + + GD +K F + R L +
Sbjct: 589 NVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSV---DVI 645
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL + K+GR E + F M GI D Y L+ + + E L +
Sbjct: 646 VYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLL-------DGHLKETLQQGW 698
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G+ ++ FL + +++ SMK+ ++ V+++G K
Sbjct: 699 E--GIAKERRSFL----------LRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYL 746
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++++++ +G P Y ++IN YC G SKAE + EM KG + + +S +
Sbjct: 747 VEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 806
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 16/218 (7%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M E ++ D Y+ LI + ++ A F + ++G+ D+ V+ L+ Y + G
Sbjct: 600 MLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGR 659
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSK-------------RRAYWAAV---KVYE 189
+++ ++ M N + V+++G K RR++ K+
Sbjct: 660 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 719
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ P Y +I+ C+ +A ++F EM QKG AY++++ Y G
Sbjct: 720 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 779
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
I A L+ +M KG EP+ ++ L R++ ++
Sbjct: 780 EISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 817
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 114/291 (39%), Gaps = 21/291 (7%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y++ +S G D Y ++++ + + +LF E S P L D
Sbjct: 86 YFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSSSNASGPEILP----LVD 141
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
++ L F D K + V A+ IC F+ I + V ++
Sbjct: 142 HHRRTCATPCSLSFMVDCLIKACITCYDVQAT-ICLFSGICRLGVVPSVWT--------- 191
Query: 129 DLEVFLKLVLMYI-EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
L+L +I E G E L MK +L ++ + + A++V
Sbjct: 192 -----WNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQV 246
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ ++ G P Y+S + C G Y A + E+ ++ +AY+ ++ K
Sbjct: 247 WAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCK 306
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLEKYTTVIS 297
R+ +A +L+ +G P+V+ Y+ L+ + + NL ++ Y ++S
Sbjct: 307 EMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVS 357
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ ++ Y ++ + G + +AL E S+K+ P Y IL D L
Sbjct: 255 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM--VPDG-FTYSILFDGL 311
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++G + +L F + G+ + L+ +V +AEE+ + G++
Sbjct: 312 SRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 371
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
++ L+ Y + G +E MK+ + ++NG K A + +
Sbjct: 372 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 431
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P T+ ++I+AY R G K V EMQ+ G VV+Y S+V + K G+
Sbjct: 432 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 491
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
I +A+ ++ M K PN +YN+++D
Sbjct: 492 IPEAVAILDDMFHKDVLPNAQVYNAIID 519
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 41/288 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M ++ + Y +++ K GD E A L + L P++ Y +L
Sbjct: 219 FDEMTERAVLPNHITYNTMIDGHIKGGDLE--AGFSLRDQMVCHGLKPNAI-TYNVLLSG 275
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++GR E +M + ++ D Y+ L + L + + K ML
Sbjct: 276 LCRAGRMGETSALLDEMASQKMVPDGFTYSILF------------DGLSRNGDSKAML-- 321
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+F K S+KN + I D +++NG K A +V +
Sbjct: 322 -SLFGK-------------------SLKNG-VTIGDYTCSILLNGLCKDGKVSIAEEVLQ 360
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L++ G +P +V Y ++IN YC+ G A F +M+ + + Y++++ K
Sbjct: 361 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 420
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
RI +A L+ +M+ G P V +N+L+D +GR QLEK V+S
Sbjct: 421 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG---QLEKCFIVLS 465
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 122/276 (44%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MKS I D Y ++ K L +E + ++ T + L D+
Sbjct: 394 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT---VETFNTLIDA 450
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G++G+ + +M+E G+ + Y S++ +F ++ A + + K +L +
Sbjct: 451 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 510
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+V+ ++ Y+E G ++ +VE MK+ ++ S +++ G + A ++
Sbjct: 511 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 570
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L + IP V+Y ++I+A C G KA + M + G V Y +++ G G
Sbjct: 571 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 630
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
R+ + L KM P+ I+N +++ + + N
Sbjct: 631 RLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 666
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 119/298 (39%), Gaps = 17/298 (5%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L P+ +Y L + ++G F MK + I D Y +LI + A
Sbjct: 367 LVPTRV-IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 425
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
++L E ++ G+ +E F L+ Y G +EK V+ M+ L + IVN
Sbjct: 426 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 485
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K AV + + + + +P Y +II+AY G +A + +M+ G
Sbjct: 486 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 545
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HG---RAKNLRQ 288
+V Y+ ++ +I +A ++ + P+ YN+L+ G +A +L+Q
Sbjct: 546 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 605
Query: 289 ----------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
+ Y +IS A Y + N V A+ IMV +SK
Sbjct: 606 RMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 663
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 90/218 (41%), Gaps = 3/218 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ G+ + Y I+ AF K G + A+ + + D+ P++ +Y + D+
Sbjct: 466 EMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK--DVLPNA-QVYNAIIDAYV 522
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G + MK GI Y LI + +++ AEE+ ++ D
Sbjct: 523 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 582
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ G ++K L++ + M + + +++G +Y+++
Sbjct: 583 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKM 642
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+ +P + ++ AY + G KAE + EM QK
Sbjct: 643 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 108/215 (50%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L + + K GR E +KF +M G + + ++ S S AE+L +
Sbjct: 120 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML 179
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + F L+ +G++ + ++++E M + +++GF K +
Sbjct: 180 RKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMD 239
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ + ++S+GC P VTY +++ A C+ G A ++ ++ KG ++ Y++++
Sbjct: 240 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVI 299
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G+ A++L+ +M+ KG +P++ Y+SL+
Sbjct: 300 DGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 334
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 16/194 (8%)
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+E V + +++++ M+N V++NG K A+K + S GC P +
Sbjct: 94 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 153
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
T+ I+ + C G + AEK+ +M +KG VV ++ ++ + G + A+ ++ KM
Sbjct: 154 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 213
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNL-RQLE---------------KYTTVISAYNMAREF 305
GC PN YN L+ + K + R +E Y T+++A +
Sbjct: 214 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 273
Query: 306 DMCVKFYNEFRMNG 319
D+ V+ N+ G
Sbjct: 274 DVAVEILNQLSSKG 287
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 112/263 (42%), Gaps = 19/263 (7%)
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
S Y C + + + A +L E KG D+ + L+ +EG +++ ++ + +
Sbjct: 86 SFYVQTTCKESGVGQ---AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 142
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
M + + +I+ + A K+ ++ +GC P VT+ +IN CR GL
Sbjct: 143 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 202
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+A + +M G ++Y+ ++ + K ++ A+ + M +GC P++ YN+
Sbjct: 203 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 262
Query: 276 LMDM---HGR----AKNLRQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
L+ G+ + L QL Y TVI + + + +K +E R G
Sbjct: 263 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 322
Query: 320 GVIDRAMAGIMVGVFSKLSQIEE 342
D +V S+ +++E
Sbjct: 323 LKPDIITYSSLVSGLSREGKVDE 345
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G GRA +IL+ M G + Y L+ F ++ A E +G D+
Sbjct: 201 GLLGRAIDILE---KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 257
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ ++G V+ +E++ + + + +++G SK A+K+ ++
Sbjct: 258 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 317
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G P +TY+S+++ R G +A K F +++ G + Y+S++ K+ +
Sbjct: 318 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 377
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A+ +A M K C+P Y L++
Sbjct: 378 TDRAIDFLAYMISKRCKPTEATYTILIE 405
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 85/210 (40%), Gaps = 1/210 (0%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP+S Y L K + +++ M +G D Y +L+ + +V VA
Sbjct: 219 TPNSLS-YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 277
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
E+ + KG L + ++ + G E+ +++++ M+ L +V+G
Sbjct: 278 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 337
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
S+ A+K + L G P +TY SI+ C+ +A M K
Sbjct: 338 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 397
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
Y+ ++ G ++A+ L+ ++ +G
Sbjct: 398 ATYTILIEGIAYEGLAKEALDLLNELCSRG 427
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 71/171 (41%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L +L K G+ ++ + KG Y ++I + + + + A +L E
Sbjct: 260 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 319
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + LV EG V++ ++ ++ + + I+ G K R
Sbjct: 320 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 379
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
A+ +IS+ C P + TY +I GL +A + E+ +G K
Sbjct: 380 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVK 430
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 142/332 (42%), Gaps = 23/332 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD-- 68
++M G+ D Y +++A+ + G E L E E+ + PSS +IL
Sbjct: 316 DEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAGFR 373
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G+ +AF +L R+M G+ D Y +I +F + A + F E+G+
Sbjct: 374 DRGEWQKAFAVL---REMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEP 430
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ + + G ++ +E+ + M+ + + +++N + + + +
Sbjct: 431 DVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAML 490
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ QG +P +TY ++++ Y R G + +A M+ G Y ++V Y +
Sbjct: 491 AEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQR 550
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKY 292
G A+ +V M+ G E + + NSL++ G + + + + Y
Sbjct: 551 GLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITY 610
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
TT++ A +F+ Y E +G DR
Sbjct: 611 TTLMKALIRVEQFEKVPVIYEEMITSGCAPDR 642
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 40/286 (13%)
Query: 35 IGDSEKVA---ALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGI 91
+G + +VA ALFLE ++ P T Y L K G + +M + G+
Sbjct: 266 LGSARRVAEAEALFLEFFLAG-EIKPR-TRAYNALLKGYVKIGSLKNAEQVLDEMSQCGV 323
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D + Y+ L+ ++ + A L KE E G+ VF +++ + + G +K
Sbjct: 324 APDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFA 383
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
V+ M + + V+++ F K A+ ++++ +G P VT+ ++I+A+C
Sbjct: 384 VLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHC 443
Query: 212 RIGLYSKA-----------------------------------EKVFIEMQQKGFDKCVV 236
+ G + +A E + EM+++G ++
Sbjct: 444 KGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNII 503
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
Y+++V +YG++GR ++A+ + MK G +P+ +Y++L++ + +
Sbjct: 504 TYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQ 549
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M+ GI D + +++A K G ++ LF E P T Y I+ +
Sbjct: 420 FDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN---CPLGTTTYNIMINL 476
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ R + +MKE+G++ + Y +L+ + K A + + + G+
Sbjct: 477 LGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPS 536
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ LV Y + G+ + L VV++M+ L S + ++N F + R A V +
Sbjct: 537 PTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQ 596
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+ G P +TY +++ A R+ + K ++ EM G
Sbjct: 597 FMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSG 637
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 104/261 (39%), Gaps = 23/261 (8%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASI---AEVKVAEELFKEAEEKGMLRDLEVFLKL 136
L+ ++E L D + Y+ L+ + E + + L + E + D +F L
Sbjct: 168 LRLLGLLREHSFLPDLASYSHLLALLLNTRDPPEAALLDRLLGDLRESRLEPDAPLFSDL 227
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNI-SDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
+ + + + LE++ S + L S+ ++ +I + S RR A E ++
Sbjct: 228 ISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGE 287
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
P Y +++ Y +IG AE+V EM Q G YS +V Y + GR A
Sbjct: 288 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 347
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEF 315
L+ +M+ G +P+ ++ ++ +++ + E+ E
Sbjct: 348 ILLKEMEADGVKPSSYV-------------------FSRILAGFRDRGEWQKAFAVLREM 388
Query: 316 RMNGGVIDRAMAGIMVGVFSK 336
+G DR +M+ F K
Sbjct: 389 HASGVRPDRHFYNVMIDTFGK 409
>gi|297736717|emb|CBI25753.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 3/208 (1%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+++F M E G D Y+++I ++ V +A +L+ A + D F L+ +
Sbjct: 231 VEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRI 290
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
Y G + L V E MK + + I +++ + + W A +Y+++ + G P
Sbjct: 291 YGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPS 350
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV---AYSSMVAMYGKTGRIRDAMR 256
TYA+++ AY R A V+ EM++KG C+ +SS++ +Y +G++ +A
Sbjct: 351 WGTYAALLRAYGRARYAEDALIVYKEMKEKGSGNCMPDSWTFSSLITIYSCSGKVSEAEA 410
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
++ M G EPN+++ SL+ +G+A
Sbjct: 411 MLNAMLEAGFEPNIFVLTSLIQCYGKAN 438
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+VF K + E + ++ LE +K + S ISC V+ + W +E
Sbjct: 183 LKVFRKCRNLDRAEKLFDEMLE--RGVKPDNITFSTIISCARVSSLPNKAVEW-----FE 235
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ GC P VTY+++I+AY R G A K++ + + + V +S+++ +YG +G
Sbjct: 236 KMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSG 295
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YT 293
+ + +MK G +PN+ IYN+L+D GRAK Q + Y
Sbjct: 296 NFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYA 355
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGG 320
++ AY AR + + Y E + G
Sbjct: 356 ALLRAYGRARYAEDALIVYKEMKEKGS 382
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/225 (17%), Positives = 88/225 (39%), Gaps = 35/225 (15%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP----------- 57
++EKM G D Y +++A+ + G+ + L+ + K + P
Sbjct: 233 WFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYG 292
Query: 58 ---------------------SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
+ +Y L D++G++ R ++ +++M G+
Sbjct: 293 MSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWG 352
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGM---LRDLEVFLKLVLMYIEEGMVEKTLEVV 153
YA+L+ ++ + A ++KE +EKG + D F L+ +Y G V + ++
Sbjct: 353 TYAALLRAYGRARYAEDALIVYKEMKEKGSGNCMPDSWTFSSLITIYSCSGKVSEAEAML 412
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
+M A + + ++ + K V+ +++L+ P
Sbjct: 413 NAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITP 457
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 130/274 (47%), Gaps = 3/274 (1%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
+Q + M+ + D Y +++A Y GD + +L+ E + L++ P H
Sbjct: 218 TQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPP---HA 274
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y ++ L K G+ E F M +KG + ++Y +LI S A + A LF+ +
Sbjct: 275 YSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMK 334
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G+ D+ + +V + G +++ +E +E + + ++ + +++G K
Sbjct: 335 KEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVH 394
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K++E+++ +GC P Y ++I+A + G +A F M+ +G D+ V Y+ M+
Sbjct: 395 EAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMI 454
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+ + +A+++ M KG P + +L
Sbjct: 455 NGLFREHKNEEALKMWDMMIDKGITPTAAAFRAL 488
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 13/247 (5%)
Query: 41 VAALFLECESRKLDLTPSS---------THMYKILCDSLGKSGRAFEILKFFRDMKEKGI 91
V ++F+E R L++ + M K C +GK+ +AFE FRDM+ + +
Sbjct: 178 VNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYC-QVGKTQKAFEK---FRDMELRNV 233
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D Y +LI + + + + L+ E +E G+ + ++ +EG +
Sbjct: 234 APDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYA 293
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
V E M ++ I +++ +K A+ ++E++ +G P VTY ++N C
Sbjct: 294 VFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMC 353
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ G +A + + G + YSS++ GK GR+ +A +L +M KGC P+ +
Sbjct: 354 KSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSY 413
Query: 272 IYNSLMD 278
YN+L+D
Sbjct: 414 CYNALID 420
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 128/305 (41%), Gaps = 42/305 (13%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
CY ++ GD + V ++F C+ R + + + ++ S G G E+L +
Sbjct: 99 CYVSSIDVLAINGDLDNVKSVF--CKFRGMGFLMNVSAANSLI-KSFGSLGMVEELLWVW 155
Query: 84 RDMKEKGILEDPSV-------------------------------------YASLICSFA 106
R MKE G+ +PS+ Y ++I +
Sbjct: 156 RGMKENGV--EPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYC 213
Query: 107 SIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC 166
+ + + A E F++ E + + D ++ L+ EG + L + M L I
Sbjct: 214 QVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPH 273
Query: 167 ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
+++ G K V+E++I +GC Y ++I++ + G +A +F M
Sbjct: 274 AYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERM 333
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+++G + VV Y +V K+GR+ +AM + + G N +Y+SL+D G+A +
Sbjct: 334 KKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRV 393
Query: 287 RQLEK 291
+ EK
Sbjct: 394 HEAEK 398
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 124/276 (44%), Gaps = 4/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+EKM G ++ Y ++++ K G+ + LF E K + Y ++ +
Sbjct: 295 FEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLF---ERMKKEGLEPDVVTYGVVVNC 351
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ KSGR E +++ + G+ + +Y+SLI V AE+LF+E +KG D
Sbjct: 352 MCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPD 411
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G ++ L + M++ + + +++NG + A+K+++
Sbjct: 412 SYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWD 471
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I +G P + ++ C G ++A K+ E+ G A+ M+ + K G
Sbjct: 472 MMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIP-ETAFEDMLNVLCKAG 530
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
RI++A +L +G E + L++ +A N
Sbjct: 531 RIKEACKLADGFVDRGREIPGRVRTVLINALRKAGN 566
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 123/291 (42%), Gaps = 16/291 (5%)
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D L +G + F + G L + S SLI SF S+ V+ +++ +E G+
Sbjct: 105 DVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVE 164
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
L + L+ + +E V+E M+N ++ ++ G+ + A +
Sbjct: 165 PSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEK 224
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ + + P ++TY ++I A G + ++ EM + G + AYS ++ K
Sbjct: 225 FRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCK 284
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ------------LEK---- 291
G+ + + KM KGC+ NV IY +L+D + + N+ + LE
Sbjct: 285 EGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVT 344
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y V++ + D +++ R+NG ++ + ++ K ++ E
Sbjct: 345 YGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHE 395
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 115/224 (51%), Gaps = 6/224 (2%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+GK +AF +++ +M ++ D Y I + SI + AE++F+ EKG D
Sbjct: 316 MGKVEKAFAVME---EMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPD 372
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ + +EG + V+ M A + + I +I++GF K A+++Y+
Sbjct: 373 MHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQ 432
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGK 247
+++ G +P VTY ++INA C++ +A ++ EMQ++ + +V YS ++ GK
Sbjct: 433 RILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGK 492
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-MHGRAKNLRQLE 290
G A L+A+M G P+ + Y SL+ + G K R +E
Sbjct: 493 VGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAME 536
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 119/286 (41%), Gaps = 4/286 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MKS GI + + I+ A D +K + F K + T Y +L D L
Sbjct: 153 EMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPT---LFTYTVLVDGLC 209
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+ + F +M KG D Y+SLI + V A +L +G
Sbjct: 210 KAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAV 269
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ +V + G +++ ++ ++ M+ L IV G+ A V E++
Sbjct: 270 AYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEM 329
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ C P ++Y I A IG +AEKVF M +KG + Y ++ + K G +
Sbjct: 330 ADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSM 389
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKYTTVI 296
A ++ M +PN +IY +MD ++ L + LE Y ++
Sbjct: 390 AAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRIL 435
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%)
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
++ MK+ + + VI++ RR AV + + C P TY +++ C
Sbjct: 150 LLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLC 209
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ +A VF EM +KG+ ++AYSS++ K GR+ +A +LV M +G P
Sbjct: 210 KAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAV 269
Query: 272 IYNSLM 277
Y S++
Sbjct: 270 AYTSIV 275
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 113/268 (42%), Gaps = 6/268 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M D+ Y +EA Y IG E+ +F E+ H Y I+ D+
Sbjct: 327 EEMADRDCAPDTISYTMFIEALYSIGRREEAEKVF---ETMVEKGCKPDMHTYGIIIDNF 383
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G R M + + + +Y ++ F + ++ A EL++ + G+L
Sbjct: 384 CKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPST 443
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ ++ + +++ LE++ M + EL S +I++G K A +
Sbjct: 444 VTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLL 503
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++I G IP TY S+I G S+A ++ EM + G Y ++V + ++
Sbjct: 504 AEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS 563
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+ A L+ +M G PN + + ++
Sbjct: 564 D-VDAAWDLLQEMMRNGHTPNEFTFKAV 590
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 1/203 (0%)
Query: 77 FEILK-FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
FE++ R+MK +GI + + + ++ + + ++ A F L +
Sbjct: 144 FEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTV 203
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
LV + VE+ +V E M +++G SK A K+ + ++++G
Sbjct: 204 LVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARG 263
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
P V Y SI+ C+ G +A K EM+++ V YS +V Y G++ A
Sbjct: 264 PPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAF 323
Query: 256 RLVAKMKPKGCEPNVWIYNSLMD 278
++ +M + C P+ Y ++
Sbjct: 324 AVMEEMADRDCAPDTISYTMFIE 346
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L Y+++ GI+ + Y ++ A K+ ++ L E + RK +L PS Y
Sbjct: 425 EEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIV-TY 483
Query: 64 KILCDSLGKSG---RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
++ LGK G RAF++L +M + G++ D Y SLI + A +V A EL +E
Sbjct: 484 SMIIHGLGKVGMEERAFDLLA---EMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEE 540
Query: 121 AEEKGMLRDLEVFLKLV 137
+ G+ D + LV
Sbjct: 541 MLKAGIFPDDHTYGTLV 557
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 100/226 (44%), Gaps = 12/226 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M G D Y I++ F K G AA + K + P+ ++Y ++ D
Sbjct: 361 FETMVEKGCKPDMHTYGIIIDNFCKEG--SMAAATHVLRLMDKAAVKPNR-YIYTMIMDG 417
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KS R E L+ ++ + + GIL Y ++I + + ++ A EL +E + + +
Sbjct: 418 FVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRK--EE 475
Query: 130 LEVFLKLVLMYIEE----GMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAA 184
LE + M I GM E+ +++ M + + I DC + ++ + A
Sbjct: 476 LEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGV-IPDCFTYTSLIQTLAGAGKVSRA 534
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+++ E+++ G P TY +++ CR + A + EM + G
Sbjct: 535 MELLEEMLKAGIFPDDHTYGTLVQILCRSDV-DAAWDLLQEMMRNG 579
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 3/163 (1%)
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
L+L + G + L +S +E N+S +++ GF+ R + + ++ S+G
Sbjct: 102 LLLALVRGGHLSDALGFFQS-SISEPNVSSF--NILLRGFAARDDFEVVNALLREMKSRG 158
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
T+ I++A C KA F + + + Y+ +V K ++ A
Sbjct: 159 ITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERAC 218
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
+ +M KG +P++ Y+SL+D +A + + K ++ A
Sbjct: 219 DVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVA 261
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 34/290 (11%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLE-------------------CESRKLDL------ 55
D Y +M F+K GD +K ALF E C K+ +
Sbjct: 136 DEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFK 195
Query: 56 ------TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA 109
+P+ Y I+ D L KS + + + F+ M +K I D Y +LI
Sbjct: 196 DMSGIFSPNLIS-YTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQR 254
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCIS 168
VK A +LF+EA KG + + ++ + G +E L + + M + L
Sbjct: 255 RVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTY 314
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
++NG + A ++YE+++ GC P VTY ++++ C+ G KA ++F +M
Sbjct: 315 SALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGV 374
Query: 229 KGF-DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
D V+ Y+ ++ + K R+ DA++L +M+ + P+ + +++
Sbjct: 375 GNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVI 424
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 4/171 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKE 120
Y L D L KSG + ++ FR M G + DP+V Y LI F + + A +L KE
Sbjct: 349 YNTLLDGLCKSGCEDKAMEIFRKMG-VGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKE 407
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
E + +L D F ++ +E +++ E+ ES+ + ++ G+ K
Sbjct: 408 MEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITR 466
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A K++++++ GC P TY +++ +CR G YS A ++ EM + GF
Sbjct: 467 IDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGF 517
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 9/211 (4%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM--LRD 129
K+ R + FF+ + D Y +L+ F +VK A LF E ++ G+ LR
Sbjct: 114 KARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRS 173
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY 188
+ L+ + G + EV + M + + IS ++++G K R A+ ++
Sbjct: 174 HNIVLRGL---CSGGKISMAWEVFKDMSG--IFSPNLISYTIMIDGLCKSRKVDKAITLF 228
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+Q++ + P VTY ++I+ + +A +F E + KG VV Y++M+ K
Sbjct: 229 KQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKC 288
Query: 249 GRIRDAMRLVAKM-KPKGCEPNVWIYNSLMD 278
GRI +A+ L M + +P+++ Y++L++
Sbjct: 289 GRIENALTLYDDMVREPHLKPDMFTYSALIN 319
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L K E + + R M +G L D Y ++I + I+ V+ A EL K+A
Sbjct: 259 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 318
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + D + L+ EG VE+ LE+ + + + +V G +
Sbjct: 319 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 378
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++V ++ +GC P TY +IN C++G S A V + KG+ V +++++
Sbjct: 379 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 438
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y K ++ A++LV +M G P+ YNS+++
Sbjct: 439 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 474
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 143/330 (43%), Gaps = 51/330 (15%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D K E + +D KG + D Y SLI + +V+ A ELF EA+
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 353
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK----NAEL--------------NIS 164
KG+ D+ V+ LV +G++ L+V+ M + ++ NIS
Sbjct: 354 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 413
Query: 165 DCISCV-----------------IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
D + +++G+ KR +A+++ E++ G P +TY S++
Sbjct: 414 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 473
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N C+ G ++ + F EM KG + Y+ ++ + ++ ++ +A +++ KM +G
Sbjct: 474 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 533
Query: 268 PNVWIYNSLM-------DMHGRAKNLRQLEK---------YTTVISAYNMAREFDMCVKF 311
P+ +N+L+ D+ G ++LE+ + T+I A++ M K
Sbjct: 534 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 593
Query: 312 YNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
++E G D +++ K + ++
Sbjct: 594 FDEMLSKGHRADSYTYRVLIDGSCKTANVD 623
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 12/258 (4%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
YC ++ Y G + LF + + P+ K+L +L K G E
Sbjct: 155 YCTVVCGLYAHGHTHDARQLFDQM--LHTHVFPNLAAFNKVL-HALCKRGDVLEAGLLLG 211
Query: 85 DMKEKGI---LEDPSVYASLICSFASIAE-VKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ ++G+ L +++ +C + E V++ + + A + D+ + L+
Sbjct: 212 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA-----VPDVVTYNTLIRGL 266
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
++ M ++ + + M N D I++G+ K A ++ + + +G +P Q
Sbjct: 267 CKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQ 326
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY S+IN C G +A ++F E Q KG +V Y+S+V G I A++++ +
Sbjct: 327 VTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNE 386
Query: 261 MKPKGCEPNVWIYNSLMD 278
M +GC P++ YN +++
Sbjct: 387 MAEEGCHPDIQTYNIVIN 404
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 96/211 (45%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T Y + + L K+G+ E+ + F++M KG +P Y LI +F +++ A ++
Sbjct: 466 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 525
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
+ ++G+ D F L+ + G +E + + ++ + + ++ FS +
Sbjct: 526 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKL 585
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A K++++++S+G TY +I+ C+ +A +EM +KGF + +
Sbjct: 586 NMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFG 645
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
++ R+ A+ ++ M G P V
Sbjct: 646 RVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 676
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 117/334 (35%), Gaps = 77/334 (23%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCDSLGKSG 74
G V D YC ++ GD E+ LF E +++ K D+ +Y L L G
Sbjct: 321 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV-----VYNSLVKGLCLQG 375
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
L+ +M E+G D Y +I + + A + +A KG L D+ F
Sbjct: 376 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 435
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ Y + ++ L++VE M + ++NG K + ++++I +
Sbjct: 436 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 495
Query: 195 GCIPGQVT-----------------------------------YASIINAYCRIG----- 214
GC P +T + ++I +CR G
Sbjct: 496 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 555
Query: 215 --LYSK----------------------------AEKVFIEMQQKGFDKCVVAYSSMVAM 244
L+ K AEK+F EM KG Y ++
Sbjct: 556 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 615
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KT + A + +M KG P++ + +++
Sbjct: 616 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 649
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 6/266 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM+ GI+ + Y +++ D + LF E L H Y +L D+L
Sbjct: 522 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK---PDEHAYAVLTDALC 578
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+GRA E F + KG+ Y +LI F+ A L + ++G D
Sbjct: 579 KAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSY 635
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ ++ + + L +++ M + + ++++ + + A ++Y ++
Sbjct: 636 TYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S G P TY IN+YC+ G AE + ++M+++G VV Y+ ++ G G I
Sbjct: 696 TSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYI 755
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
A + +M CEPN W Y L+
Sbjct: 756 DRAFSTLKRMVGASCEPNYWTYCLLL 781
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 129/308 (41%), Gaps = 18/308 (5%)
Query: 50 SRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA 109
S +L L+P Y SL + + + + + + G+L D Y ++I S+
Sbjct: 141 SARLALSPKC---YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEG 197
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
++ A F+ E G+ + LVL Y G + K + M ++
Sbjct: 198 DLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYT 257
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++ G + A+ ++ + GC P + +I+ C+ G A +F M Q
Sbjct: 258 ILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQN 317
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G V+ Y++M+ Y K GR+ DA+++ M+ GC P+ W YN+L+ K
Sbjct: 318 GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAE 377
Query: 290 E---------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
E +T +I+ Y MA +FD ++ N+ + +D + G ++
Sbjct: 378 ELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSL 437
Query: 335 SKLSQIEE 342
K +++E
Sbjct: 438 IKKDRLKE 445
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 114/287 (39%), Gaps = 24/287 (8%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S Y + K GR + LK M++ G D Y +LI + + AEEL
Sbjct: 321 PSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEEL 379
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
A ++G + F L+ Y + L + M +++ + + ++N K
Sbjct: 380 LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIK 439
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ ++ + G +P +TY SII+ YC+ G A +V M++ G
Sbjct: 440 KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWT 499
Query: 238 YSSMVAMYG--KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
Y+S+ MYG K ++ AM L+ KM+ G PNV YTT+
Sbjct: 500 YNSL--MYGLVKDKKLHKAMALLTKMQKDGIIPNVIT-------------------YTTL 538
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +FD + + NG D ++ K + EE
Sbjct: 539 LQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 585
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 122/307 (39%), Gaps = 41/307 (13%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++ + G+V + Y I++ + K G + +A L+ R D + Y L L
Sbjct: 451 NEISANGLVPNVITYTSIIDGYCKSGKVD-IALEVLKMMER--DGCQPNAWTYNSLMYGL 507
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + + + M++ GI+ + Y +L+ + A LF+ E+ G+ D
Sbjct: 508 VKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDE 567
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L + G E+ + A ++ +++GFSK A + E+
Sbjct: 568 HAYAVLTDALCKAGRAEEAYSFIVRKGVA---LTKVYYTTLIDGFSKAGNTDFAATLIER 624
Query: 191 LISQGCIPGQVTYASIINAYC-----------------------------------RIGL 215
+I +GC P TY+ +++A C R G
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+ A++++ EM G Y+ + Y K GR+ DA L+ KM+ +G P+V YN
Sbjct: 685 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 744
Query: 276 LMDMHGR 282
L+D G
Sbjct: 745 LIDGCGH 751
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 114/279 (40%), Gaps = 23/279 (8%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYKILCDSLGKSG 74
G+ L Y +++ F K G+++ A L R +D TP S + Y +L +L K
Sbjct: 594 GVALTKVYYTTLIDGFSKAGNTDFAATLI----ERMIDEGCTPDS-YTYSVLLHALCKQK 648
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
R E L M +GI Y LI + A+ ++ E G +
Sbjct: 649 RLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYT 708
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
+ Y +EG +E +++ M+ + ++++G A ++++
Sbjct: 709 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA 768
Query: 195 GCIPGQVTYASIIN-------AYCRI----GLYSKAE-----KVFIEMQQKGFDKCVVAY 238
C P TY ++ AY R G+++ E ++ M + G + V Y
Sbjct: 769 SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTY 828
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
SS++A + K GR+ +A L+ M KG PN IY L+
Sbjct: 829 SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 110/283 (38%), Gaps = 19/283 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M G DS Y ++ A K + + + R + T Y IL D +
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT---IFAYTILIDEM 679
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G+ + + +M G + Y I S+ ++ AE+L + E +G+ D+
Sbjct: 680 LREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDV 739
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-RRAY-------- 181
+ L+ G +++ ++ M A + C+++ K AY
Sbjct: 740 VTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSG 799
Query: 182 -WAAV------KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
W + ++ E+++ G P TY+S+I +C+ G +A + M KG
Sbjct: 800 MWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPN 859
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y+ ++ T A+ V+ M G +P + Y L+
Sbjct: 860 EDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 902
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L +L K G E + F DM + + Y S++ S + A E+ +
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
EKG++ D ++ + + + ++ E MK + ++++ F +
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEV 493
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+ ++E+L C P ++Y S+IN + G +A F EMQ+KG + VV YS++
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +GKT R+ A L +M KGC+PN+ YN L+D
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD 590
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 127/278 (45%), Gaps = 17/278 (6%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEI 79
+ G Y ++ K+G + LF + S + S Y + +SL +G+ E
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDS---YMSMLESLCGAGKTIEA 426
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
++ + EKG++ D +Y ++ + + ++ +LF++ ++ G D+ + L+
Sbjct: 427 IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISS 486
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVI-----VNGFSKRRAYWAAVKVYEQLISQ 194
+ G V++ + + E EL SDC +I +N K A ++++ +
Sbjct: 487 FGRVGEVDEAINIFE-----ELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G P VTY++++ + + A +F EM KG +V Y+ ++ K+GR +A
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEA 601
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDM----HGRAKNLRQ 288
+ L KMK +G P+ Y L + HG+++ R+
Sbjct: 602 VDLYTKMKQQGLTPDSITYTVLERLQSGSHGKSRIRRK 639
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 124/282 (43%), Gaps = 11/282 (3%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
+S Y +++ G LD Y +++A K EK +F + + R +
Sbjct: 218 DSSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK---DEKACQVFEDMKKRHCR---RDEY 271
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y I+ ++G+ G+ E + F +M +G+ + Y +L+ A V A ++F
Sbjct: 272 SYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 122 EEKGMLRDLEVFLKLVL-MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
E G R E LVL + + EG + + +VE K ++ I +V SK
Sbjct: 332 VETG-CRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRY---MTQGIYSYLVRTLSKLGH 387
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +++ + S + +Y S++ + C G +A ++ ++ +KG + Y++
Sbjct: 388 VSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNT 447
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+ + GK +I L KMK G P+++ YN L+ GR
Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGR 489
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 5/169 (2%)
Query: 5 SKLH-YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
S +H +EKMK G D Y ++ +F ++G+ ++ +F E E + D P Y
Sbjct: 459 SHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELE--RSDCKPDIIS-Y 515
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + LGK+G E F++M+EKG+ D Y++L+ F V++A LF+E
Sbjct: 516 NSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLV 575
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
KG ++ + L+ + G + +++ MK L D I+ ++
Sbjct: 576 KGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLT-PDSITYTVL 623
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 4/251 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + L K + E L F +M KGI D Y SLI + ++ E K L E
Sbjct: 164 YGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 223
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ ++ ++ +V +EG V + +VV+ M + +++G R
Sbjct: 224 KSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMD 283
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AVKV++ ++ GC+ V+Y ++IN YC+I KA +F EM ++ + YS+++
Sbjct: 284 EAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLI 343
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
GR++DA+ L +M G PN+ Y+ L+D + L + I N+
Sbjct: 344 HGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNL- 402
Query: 303 REFDMCVKFYN 313
D V+ YN
Sbjct: 403 ---DPDVQVYN 410
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 132/300 (44%), Gaps = 12/300 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ + +M + GI D Y ++ A + + + V L E K+ P+ + I+
Sbjct: 181 LNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKI--MPNVVSL-NIV 237
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+L K G+ E M + G+ D YA+L+ +E+ A ++F G
Sbjct: 238 VDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGC 297
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ ++ + L+ Y + ++K + + E M EL + +++G A+
Sbjct: 298 VCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIA 357
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ ++++ G IP VTY+ +++ C+ ++A + ++ D V Y+ +
Sbjct: 358 LFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMC 417
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
+ G + A L + + P+G +P+VW +N + +R L K + A + RE D
Sbjct: 418 RAGDLEAARDLFSNLAPRGLQPDVWTHNIM---------IRGLCKRGLLDEASKLFREMD 468
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N F A+ V +++ G P T+ +++ C +G +A VF +M +
Sbjct: 96 IVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGE 155
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
GF VV Y +++ K ++ +A+ L ++M KG P+++ YNSL +H NL +
Sbjct: 156 GFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSL--IHALC-NLCEW 212
Query: 290 EKYTTVIS 297
+ TT+++
Sbjct: 213 KHVTTLLN 220
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 102/261 (39%), Gaps = 16/261 (6%)
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+A L+ S A + L K+ + G+ D+ ++ + V+ L V+ +
Sbjct: 59 FAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKIL 118
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+V G A+ V+++++ +G P VTY +++N C+ +
Sbjct: 119 KLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLT 178
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A +F EM KG + Y+S++ + L+ +M PNV N ++
Sbjct: 179 EALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVV 238
Query: 278 D----------MHGRAKNLRQ------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
D H + Q + Y ++ + + E D VK ++ NG V
Sbjct: 239 DALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCV 298
Query: 322 IDRAMAGIMVGVFSKLSQIEE 342
+ ++ + K+ +I++
Sbjct: 299 CNVVSYNTLINGYCKIQRIDK 319
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 104/248 (41%), Gaps = 15/248 (6%)
Query: 11 EKMKSAGIVLDSGCYCQI------MEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
E +K +++ +GC C + + + KI +K A++L E + +L P+ T Y
Sbjct: 284 EAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDK--AMYLFEEMCRQELIPN-TMTYS 340
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI---CSFASIAEVKVAEELFKEA 121
L L GR + + F +M G + + Y+ L+ C +AE A L K
Sbjct: 341 TLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAE---AMALLKAI 397
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E + D++V+ + G +E ++ ++ L +++ G KR
Sbjct: 398 EGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLL 457
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K++ ++ GC+ TY +I + S+A ++ EM +GF V + +
Sbjct: 458 DEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALL 517
Query: 242 VAMYGKTG 249
V M G
Sbjct: 518 VKMLSDDG 525
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 6/266 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM+ GI+ + Y +++ D + LF E L H Y +L D+L
Sbjct: 522 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK---PDEHAYAVLTDALC 578
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+GRA E F + KG+ Y +LI F+ A L + ++G D
Sbjct: 579 KAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSY 635
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ ++ + + L +++ M + + ++++ + + A ++Y ++
Sbjct: 636 TYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S G P TY IN+YC+ G AE + ++M+++G VV Y+ ++ G G I
Sbjct: 696 TSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYI 755
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
A + +M CEPN W Y L+
Sbjct: 756 DRAFSTLKRMVGASCEPNYWTYCLLL 781
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 130/308 (42%), Gaps = 18/308 (5%)
Query: 50 SRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA 109
S +L L+P Y SL + + + + + + G+L D Y ++I S+
Sbjct: 141 SARLALSPKC---YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEG 197
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
++ A F+ E G+ + LVL Y G + K + M ++
Sbjct: 198 DLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYT 257
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++ G + + A+ ++ + GC P + +I+ C+ G A +F M Q
Sbjct: 258 ILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQN 317
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G V+ Y++M+ Y K GR+ DA+++ M+ GC P+ W YN+L+ K
Sbjct: 318 GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAE 377
Query: 290 E---------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
E +T +I+ Y MA +FD ++ N+ + +D + G ++
Sbjct: 378 ELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSL 437
Query: 335 SKLSQIEE 342
K +++E
Sbjct: 438 IKKDRLKE 445
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 114/287 (39%), Gaps = 24/287 (8%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S Y + K GR + LK M++ G D Y +LI + + AEEL
Sbjct: 321 PSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEEL 379
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
A ++G + F L+ Y + L + M +++ + + ++N K
Sbjct: 380 LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIK 439
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ ++ + G +P +TY SII+ YC+ G A +V M++ G
Sbjct: 440 KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWT 499
Query: 238 YSSMVAMYG--KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
Y+S+ MYG K ++ AM L+ KM+ G PNV YTT+
Sbjct: 500 YNSL--MYGLVKDKKLHKAMALLTKMQKDGIIPNVIT-------------------YTTL 538
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +FD + + NG D ++ K + EE
Sbjct: 539 LQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 585
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 122/306 (39%), Gaps = 41/306 (13%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
++ + G+V + Y I++ + K G + +A L+ R D + Y L L
Sbjct: 452 EISANGLVPNVITYTSIIDGYCKSGKVD-IALEVLKMMER--DGCQPNAWTYNSLMYGLV 508
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K + + + M++ GI+ + Y +L+ + A LF+ E+ G+ D
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 568
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L + G E+ + A ++ +++GFSK A + E++
Sbjct: 569 AYAVLTDALCKAGRAEEAYSFIVRKGVA---LTKVYYTTLIDGFSKAGNTDFAATLIERM 625
Query: 192 ISQGCIPGQVTYASIINAYC-----------------------------------RIGLY 216
I +GC P TY+ +++A C R G +
Sbjct: 626 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 685
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A++++ EM G Y+ + Y K GR+ DA L+ KM+ +G P+V YN L
Sbjct: 686 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 745
Query: 277 MDMHGR 282
+D G
Sbjct: 746 IDGCGH 751
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 114/279 (40%), Gaps = 23/279 (8%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYKILCDSLGKSG 74
G+ L Y +++ F K G+++ A L R +D TP S + Y +L +L K
Sbjct: 594 GVALTKVYYTTLIDGFSKAGNTDFAATLI----ERMIDEGCTPDS-YTYSVLLHALCKQK 648
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
R E L M +GI Y LI + A+ ++ E G +
Sbjct: 649 RLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYT 708
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
+ Y +EG +E +++ M+ + ++++G A ++++
Sbjct: 709 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA 768
Query: 195 GCIPGQVTYASIIN-------AYCRI----GLYSKAE-----KVFIEMQQKGFDKCVVAY 238
C P TY ++ AY R G+++ E ++ M + G + V Y
Sbjct: 769 SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTY 828
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
SS++A + K GR+ +A L+ M KG PN IY L+
Sbjct: 829 SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 867
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 110/283 (38%), Gaps = 19/283 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M G DS Y ++ A K + + + R + T Y IL D +
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT---IFAYTILIDEM 679
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G+ + + +M G + Y I S+ ++ AE+L + E +G+ D+
Sbjct: 680 LREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDV 739
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-RRAY-------- 181
+ L+ G +++ ++ M A + C+++ K AY
Sbjct: 740 VTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSG 799
Query: 182 -WAAV------KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
W + ++ E+++ G P TY+S+I +C+ G +A + M KG
Sbjct: 800 MWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPN 859
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y+ ++ T A+ V+ M G +P + Y L+
Sbjct: 860 EDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 902
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 144/366 (39%), Gaps = 54/366 (14%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+Y +M G+ + Y ++ +G + L E R LD+ S +++ +L D
Sbjct: 207 FYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDV---SVYVFTVLID 263
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K+G E + F +M +G + +L+ + V +A ELF E G R
Sbjct: 264 GLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKR 323
Query: 129 DLEVFLKLVLMYIEEGMVEKTL-----------------------------------EVV 153
D+ + + Y + G V + E+V
Sbjct: 324 DVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIV 383
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
++M + L C++++G K + A+ ++ QL+ G P +Y +I+ C
Sbjct: 384 KTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTS 443
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
+A + +M K +V YS ++ ++GRI +A RL+ +M KG P+ Y
Sbjct: 444 RRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITY 503
Query: 274 NSLMDMHGRAKNL------------RQLEK----YTTVISAYNMAREFDMCVKFYNEFRM 317
+ L+D + ++L R LE YT +I Y + D + + E M
Sbjct: 504 SILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHM 563
Query: 318 NGGVID 323
V D
Sbjct: 564 KNLVPD 569
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 131/334 (39%), Gaps = 55/334 (16%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
MY I+ D L ++G E +F+ +M G+ + Y SLI + + L E
Sbjct: 187 MYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEM 246
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDCISC---------- 169
+G+ + VF L+ + GM+ + E+ + M N E NI C +
Sbjct: 247 IRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNV 306
Query: 170 -----------------------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
V ++G+ K AV+V++++ +G +P VTY S+
Sbjct: 307 DMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSL 366
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+ C+ G S A ++ M + G +V ++ K+ R+ A+ L ++ G
Sbjct: 367 IDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGL 426
Query: 267 EPNVWIY-----------------NSLMDMHGRAKNL-RQLEKYTTVISAYNMAREFDMC 308
P+VW Y N L DMH KNL + Y+ +I +
Sbjct: 427 TPDVWSYTILIHGCCTSRRMGEAMNLLRDMH--LKNLVPHIVTYSCLIDGLCRSGRISNA 484
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ NE + G + D I++ K ++E
Sbjct: 485 WRLLNEMHVKGPLPDTITYSILLDALWKKQHLDE 518
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 110/265 (41%), Gaps = 5/265 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G+V + Y +++ K G E A + + LTP IL D
Sbjct: 348 FDEMCREGVVPNIVTYNSLIDCLCKAG--EVSGAWEIVKTMHRSGLTPDIVTCC-ILLDG 404
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KS R + + F + E G+ D Y LI + + A L ++ K ++
Sbjct: 405 LCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPH 464
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY 188
+ + L+ G + ++ M + + + D I+ ++++ K++ AV ++
Sbjct: 465 IVTYSCLIDGLCRSGRISNAWRLLNEM-HVKGPLPDTITYSILLDALWKKQHLDEAVFLF 523
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
Q+I +G P + Y +I+ YC+ +A +F EM K +V Y+ + K+
Sbjct: 524 NQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKS 583
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIY 273
G + V ++ P V Y
Sbjct: 584 GSNSYEWKFVNVIRDINPPPRVLKY 608
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 6/266 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM+ GI+ + Y +++ D + LF E L H Y +L D+L
Sbjct: 407 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL---KPDEHAYAVLTDALC 463
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+GRA E F + KG+ Y +LI F+ A L + ++G D
Sbjct: 464 KAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSY 520
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ ++ + + L +++ M + + ++++ + + A ++Y ++
Sbjct: 521 TYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 580
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S G P TY IN+YC+ G AE + ++M+++G VV Y+ ++ G G I
Sbjct: 581 TSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYI 640
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
A + +M CEPN W Y L+
Sbjct: 641 DRAFSTLKRMVGASCEPNYWTYCLLL 666
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 129/308 (41%), Gaps = 18/308 (5%)
Query: 50 SRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA 109
S +L L+P Y SL + + + + + + G+L D Y ++I S+
Sbjct: 26 SARLALSPKC---YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEG 82
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
++ A F+ E G+ + LVL Y G + K + M ++
Sbjct: 83 DLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYT 142
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++ G + A+ ++ + GC P + +I+ C+ G A +F M Q
Sbjct: 143 ILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQN 202
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G V+ Y++M+ Y K GR+ DA+++ M+ GC P+ W YN+L+ K
Sbjct: 203 GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAE 262
Query: 290 E---------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
E +T +I+ Y MA +FD ++ N+ + +D + G ++
Sbjct: 263 ELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSL 322
Query: 335 SKLSQIEE 342
K +++E
Sbjct: 323 IKKDRLKE 330
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 114/287 (39%), Gaps = 24/287 (8%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S Y + K GR + LK M++ G D Y +LI + + AEEL
Sbjct: 206 PSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEEL 264
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
A ++G + F L+ Y + L + M +++ + + ++N K
Sbjct: 265 LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIK 324
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ ++ + G +P +TY SII+ YC+ G A +V M++ G
Sbjct: 325 KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWT 384
Query: 238 YSSMVAMYG--KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
Y+S+ MYG K ++ AM L+ KM+ G PNV YTT+
Sbjct: 385 YNSL--MYGLVKDKKLHKAMALLTKMQKDGIIPNVIT-------------------YTTL 423
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +FD + + NG D ++ K + EE
Sbjct: 424 LQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 470
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 122/307 (39%), Gaps = 41/307 (13%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++ + G+V + Y I++ + K G + +A L+ R D + Y L L
Sbjct: 336 NEISANGLVPNVITYTSIIDGYCKSGKVD-IALEVLKMMER--DGCQPNAWTYNSLMYGL 392
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + + + M++ GI+ + Y +L+ + A LF+ E+ G+ D
Sbjct: 393 VKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDE 452
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L + G E+ + A ++ +++GFSK A + E+
Sbjct: 453 HAYAVLTDALCKAGRAEEAYSFIVRKGVA---LTKVYYTTLIDGFSKAGNTDFAATLIER 509
Query: 191 LISQGCIPGQVTYASIINAYC-----------------------------------RIGL 215
+I +GC P TY+ +++A C R G
Sbjct: 510 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 569
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+ A++++ EM G Y+ + Y K GR+ DA L+ KM+ +G P+V YN
Sbjct: 570 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 629
Query: 276 LMDMHGR 282
L+D G
Sbjct: 630 LIDGCGH 636
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 114/279 (40%), Gaps = 23/279 (8%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYKILCDSLGKSG 74
G+ L Y +++ F K G+++ A L R +D TP S + Y +L +L K
Sbjct: 479 GVALTKVYYTTLIDGFSKAGNTDFAATLI----ERMIDEGCTPDS-YTYSVLLHALCKQK 533
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
R E L M +GI Y LI + A+ ++ E G +
Sbjct: 534 RLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYT 593
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
+ Y +EG +E +++ M+ + ++++G A ++++
Sbjct: 594 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA 653
Query: 195 GCIPGQVTYASIIN-------AYCRI----GLYSKAE-----KVFIEMQQKGFDKCVVAY 238
C P TY ++ AY R G+++ E ++ M + G + V Y
Sbjct: 654 SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTY 713
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
SS++A + K GR+ +A L+ M KG PN IY L+
Sbjct: 714 SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLI 752
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 110/283 (38%), Gaps = 19/283 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M G DS Y ++ A K + + + R + T Y IL D +
Sbjct: 508 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT---IFAYTILIDEM 564
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G+ + + +M G + Y I S+ ++ AE+L + E +G+ D+
Sbjct: 565 LREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDV 624
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR-AY-------- 181
+ L+ G +++ ++ M A + C+++ K AY
Sbjct: 625 VTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSG 684
Query: 182 -WAAV------KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
W + ++ E+++ G P TY+S+I +C+ G +A + M KG
Sbjct: 685 MWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPN 744
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y+ ++ T A+ V+ M G +P + Y L+
Sbjct: 745 EDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 787
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 142/332 (42%), Gaps = 23/332 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD-- 68
++M G+ D Y +++A+ + G E L E E+ + PSS +IL
Sbjct: 316 DEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAGFR 373
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G+ +AF +L R+M G+ D Y +I +F + A + F E+G+
Sbjct: 374 DRGEWQKAFAVL---REMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEP 430
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ + + G ++ +E+ + M+ + + +++N + + + +
Sbjct: 431 DVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAML 490
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ QG +P +TY ++++ Y R G + +A M+ G Y ++V Y +
Sbjct: 491 AEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQR 550
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKY 292
G A+ +V M+ G E + + NSL++ G + + + + Y
Sbjct: 551 GLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITY 610
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
TT++ A +F+ Y E +G DR
Sbjct: 611 TTLMKALIRVEQFEKVPVIYEEMITSGCAPDR 642
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 40/286 (13%)
Query: 35 IGDSEKVA---ALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGI 91
+G + +VA ALFLE ++ P T Y L K G + +M + G+
Sbjct: 266 LGSARRVAEAEALFLEFFLAG-EIKPR-TRAYNALLKGYVKIGSLKNAEQVLDEMSQCGV 323
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D + Y+ L+ ++ + A L KE E G+ VF +++ + + G +K
Sbjct: 324 APDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFA 383
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
V+ M + + V+++ F K A+ ++++ +G P VT+ ++I+A+C
Sbjct: 384 VLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHC 443
Query: 212 RIGLYSKA-----------------------------------EKVFIEMQQKGFDKCVV 236
+ G + +A E + EM+++G ++
Sbjct: 444 KGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNII 503
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
Y+++V +YG++GR ++A+ + MK G +P+ +Y++L++ + +
Sbjct: 504 TYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQ 549
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M+ GI D + +++A K G ++ LF E P T Y I+ +
Sbjct: 420 FDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN---CPLGTTTYNIMINL 476
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ R + +MKE+G++ + Y +L+ + K A + + + G+
Sbjct: 477 LGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPS 536
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ LV Y + G+ + L VV++M+ L S + ++N F + R A V +
Sbjct: 537 PTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQ 596
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+ G P +TY +++ A R+ + K ++ EM G
Sbjct: 597 FMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSG 637
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 105/261 (40%), Gaps = 23/261 (8%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA---EELFKEAEEKGMLRDLEVFLKL 136
L+ ++E L D + Y+ L+ S + + A + L + E + D +F L
Sbjct: 168 LRLLGLLREHSFLPDLASYSHLLASLLNTRDPPDAALLDRLLGDLRESRLEPDAPLFSDL 227
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNI-SDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
+ + + + LE++ S + L S+ ++ +I + S RR A E ++
Sbjct: 228 ISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGE 287
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
P Y +++ Y +IG AE+V EM Q G YS +V Y + GR A
Sbjct: 288 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 347
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEF 315
L+ +M+ G +P+ ++ ++ +++ + E+ E
Sbjct: 348 ILLKEMEADGVKPSSYV-------------------FSRILAGFRDRGEWQKAFAVLREM 388
Query: 316 RMNGGVIDRAMAGIMVGVFSK 336
+G DR +M+ F K
Sbjct: 389 HASGVRPDRHFYNVMIDTFGK 409
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 135/281 (48%), Gaps = 19/281 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
Y I++ F K+GD++ + E E+ K +P+ + L + KS R L+
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGK---SPNVV-TFTSLINGFCKSNRMDLALEMT 648
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+MK + D Y +LI F ++K A LF E E G++ ++ V+ L+ +
Sbjct: 649 HEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNL 708
Query: 144 GMVEKTLEVVESMKNAELNISDCISC------VIVNGFSKRRAYWAAVKVYEQLISQGCI 197
G ++ +++ + M ++D ISC +++G K A +Y +L+ G +
Sbjct: 709 GKMDAAIDLYKKM------VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV 762
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P ++ + ++N + G + KA K+ EM++K V+ YS+++A + + G + +A RL
Sbjct: 763 PDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRL 822
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
+M KG + ++N L+ GR + K +++ S
Sbjct: 823 HDEMLEKGIVHDDTVFNLLVS--GRVEKPPAASKISSLASP 861
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 152/341 (44%), Gaps = 24/341 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G+ ++ Y +++ F+K D + + + + + ++ +Y + +
Sbjct: 507 FSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFE---ANEVIYNTIING 563
Query: 70 L---GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L G++ +A E+L+ +KEK + Y S+I F + + A E ++E E G
Sbjct: 564 LCKVGQTSKAKEMLQNL--IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGK 621
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ F L+ + + ++ LE+ MK+ EL + +++GF K+ A
Sbjct: 622 SPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYT 681
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ +L G +P Y S+I+ + +G A ++ +M G + Y++M+
Sbjct: 682 LFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLL 741
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR-------AKNLRQLEK-------- 291
K G I A L +++ G P+ ++ L++ + +K L +++K
Sbjct: 742 KDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVL 801
Query: 292 -YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
Y+TVI+ ++ + + ++E G V D + ++V
Sbjct: 802 LYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 150/388 (38%), Gaps = 56/388 (14%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + +Y +MKS I S +++ K E +F + + ++
Sbjct: 397 EKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIF 456
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ C K G+ F + M++KGI + Y +++ + + + +A +F E E
Sbjct: 457 LLFC----KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI---------------- 167
KG+ + + L+ + + + +V+ M + ++ I
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 168 ----------------SCV----IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
SC I++GF K +AV+ Y ++ G P VT+ S+I
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
N +C+ A ++ EM+ + AY +++ + K ++ A L +++ G
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 268 PNVWIYNSLM-------------DMHGRAKNLR---QLEKYTTVISAYNMAREFDMCVKF 311
PNV +YNSL+ D++ + N L YTT+I ++
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 312 YNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
Y+E G V D + ++V SK Q
Sbjct: 753 YSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 108/244 (44%), Gaps = 35/244 (14%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK-GMLRDLEVFLKL 136
E +K FR + +G D +++ + + ++ +A +L +E K G+ E + +
Sbjct: 257 EAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSV 316
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
++ +++EG +E+ + V++ M + +S + +VNG+ K A+ ++ ++ +G
Sbjct: 317 IVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL 376
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA------------- 243
P +V ++ ++ +C+ KA + ++ M+ V +M+
Sbjct: 377 APDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALE 436
Query: 244 ---------------------MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
++ K G++ A + M+ KG EPNV YN++M H R
Sbjct: 437 IFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCR 496
Query: 283 AKNL 286
KN+
Sbjct: 497 MKNM 500
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 11/273 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ ++ S G D + ++A K D V AL L E R P+S Y + +
Sbjct: 262 FRRVMSRGAEPDGLLFSLAVQAACKTPD--LVMALDLLREMRGKLGVPASQETYTSVIVA 319
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G E ++ +M GI SL+ + E+ A +LF EE+G+ D
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV-- 187
+F +V + + +EK +E MK+ + S + ++ G K + AA+++
Sbjct: 380 KVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFN 439
Query: 188 --YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+E I+ G + + I +C+ G A M+QKG + VV Y++M+ +
Sbjct: 440 DSFESWIAHGFMCNK-----IFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAH 494
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ + A + ++M KG EPN + Y+ L+D
Sbjct: 495 CRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 20/167 (11%)
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK-GFDKCV 235
+ R AVK++ +++S+G P + ++ + A C+ A + EM+ K G
Sbjct: 251 RERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQ 310
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
Y+S++ + K G + +A+R++ +M G +V T++
Sbjct: 311 ETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVI-------------------AATSL 351
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++ Y E + +N G D+ M +MV F K ++E+
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEK 398
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 113/218 (51%), Gaps = 2/218 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H +L +SL K+ + K ++ M G++ + ++ LI + +V+ AE+L E
Sbjct: 163 HACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNE 222
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
E + + DL + L+ +Y ++GM + L + + M+ ++ ++ GF +
Sbjct: 223 MESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGR 282
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A++++ ++ G P VTY ++I+ YCR+ +A ++ M+ +G VV Y+S
Sbjct: 283 MREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNS 340
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ + G+I+DA RL+ +M + EP+ N+L++
Sbjct: 341 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLIN 378
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 129/325 (39%), Gaps = 36/325 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+KM G+V + + ++ A K GD EK L E ESR Y L
Sbjct: 185 YKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESR---FIFPDLFTYNTLISL 241
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE------ 123
K G +E L M+ G+ D Y SLI F ++ A LF+E
Sbjct: 242 YCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNHV 301
Query: 124 ------KGMLR--DLEVFLKL------------VLMY-------IEEGMVEKTLEVVESM 156
G R DLE L+L V+ Y EEG ++ ++ M
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
++ + ++N + K +A+KV ++++ G P Q T+ ++I+ +C++
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A++ EM GF YS +V Y +RL ++ KG ++ +Y +L
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481
Query: 277 MDMHGRAKNLRQLEKYTTVISAYNM 301
+ + + E+ T++ M
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGM 506
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
++ LV+ Y M + ++V E M+ V++N +K R KVY++
Sbjct: 128 QILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKK 187
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G +P + +I+A C+ G KAE++ EM+ + + Y++++++Y K G
Sbjct: 188 MVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGM 247
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--------------YTTVI 296
+A+ + +M+ G P++ YNSL+ R +R+ + YTT+I
Sbjct: 248 HYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNHVTYTTLI 307
Query: 297 SAY 299
Y
Sbjct: 308 DGY 310
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAAL--FLECESRKLDLTPSSTHMYKILCDSLGKSG 74
G + Y +++ + ++ D E+ L +E E L P Y + L + G
Sbjct: 295 GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEG----LHPGVV-TYNSILRKLCEEG 349
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+ + + +M E+ + D +LI ++ I ++ A ++ K+ E G+ D F
Sbjct: 350 KIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFK 409
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ + + V+ E + M +A + S +V+ + + A +++ ++L +
Sbjct: 410 ALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRK 469
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G Y ++I C+I AE++F MQ KG V Y+S+ Y K G+ A
Sbjct: 470 GLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAA 529
Query: 255 MRLVAKMKPK 264
++ +M +
Sbjct: 530 SDMLDEMDKR 539
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 116/243 (47%), Gaps = 16/243 (6%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
L+FF++M+ G L + Y ++I + + A + KG+ +L F ++
Sbjct: 3 LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+G +++T EV+ M + +VNG+ K + A+ ++ +++ G P
Sbjct: 63 LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY S+IN+ C+ G ++A + F +M +G Y++++ + + G + +A R++
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 260 KMKPKGCEPNVWIYNSLMDMH---GRAKN-------------LRQLEKYTTVISAYNMAR 303
+M G P++ YN+L++ H GR + L + Y+T+IS + +
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242
Query: 304 EFD 306
E D
Sbjct: 243 ELD 245
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 158/354 (44%), Gaps = 23/354 (6%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++++M+ G + + Y +++ + K+ +++ A FL K L P+ + ++
Sbjct: 3 LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDE-AFGFLRSMGLK-GLEPNLI-TFNMI 59
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L + GR E + +M KG + D Y +L+ + A L E G+
Sbjct: 60 INGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGL 119
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L+ + G + + +E + M L ++ I+NGF+++ A +
Sbjct: 120 SPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYR 179
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V ++ G IP VTY ++IN +C +G +A + +M KG VV+YS++++ +
Sbjct: 180 VLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFA 239
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE---------------- 290
+ + A ++ +M K P+ Y+SL + G + R E
Sbjct: 240 RNQELDRAFQMKVEMIGKSVLPDAVTYSSL--IQGLCEQRRLTEACDMFQEMLTIKLPPD 297
Query: 291 --KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YTT+I+AY + + + ++E G + D +++ +K ++ +E
Sbjct: 298 EFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKE 351
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 134/302 (44%), Gaps = 38/302 (12%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G V D Y ++ + K G+ + AL L E + L+P+ Y L +S+
Sbjct: 78 EMSRKGYVPDEVTYNTLVNGYCKEGNFHQ--ALVLHAEMVRNGLSPNVV-TYTSLINSMC 134
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G ++FF M +G+ + Y ++I FA + A + E G + +
Sbjct: 135 KAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIV 194
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESM--------------------KNAELN--------- 162
+ L+ + G +E+ + +++ M +N EL+
Sbjct: 195 TYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEM 254
Query: 163 -----ISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ D ++ ++ G ++R A +++++++ P + TY ++INAYC+ G
Sbjct: 255 IGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDL 314
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+KA + EM QKGF V Y+ ++ K R ++A RL+ K+ P+ YN+L
Sbjct: 315 NKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTL 374
Query: 277 MD 278
++
Sbjct: 375 IE 376
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 100/253 (39%), Gaps = 30/253 (11%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M G++ D Y I+ F + + E A ++ E + P + Y L L
Sbjct: 217 QDMVGKGVLPDVVSYSTIISGFAR--NQELDRAFQMKVEMIGKSVLPDAV-TYSSLIQGL 273
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ R E F++M + D Y +LI ++ ++ A L E +KG L D
Sbjct: 274 CEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDA 333
Query: 131 EVF------------------LKLVLMY---IEEGMVEKTLEVVESMKNAELNISDCISC 169
+ L L L Y I + TL +E+ N E +
Sbjct: 334 VTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTL--IENCCNIEFKSA----V 387
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+V GF + A +V+E +I++ P + Y II+ +CRIG KA K++ EM
Sbjct: 388 ALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHV 447
Query: 230 GFDKCVVAYSSMV 242
F V ++V
Sbjct: 448 DFVPHTVTVLALV 460
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M + + D Y ++ A+ K GD K AL L E + P + Y +L +
Sbjct: 286 FQEMLTIKLPPDEFTYTTLINAYCKEGDLNK--ALHLHDEMIQKGFLPDAV-TYNVLING 342
Query: 70 LGKSGRAFE----ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L K R+ E +LK F D + Y +LI + +I FK A
Sbjct: 343 LNKQARSKEARRLLLKLFYDDS----IPSAVTYNTLIENCCNIE--------FKSA---- 386
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ LV + +G++++ +V ESM N ++ I VI++G + A
Sbjct: 387 --------VALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAY 438
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
K+Y++++ +P VT +++ A G+ + +V
Sbjct: 439 KLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEV 475
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 10/289 (3%)
Query: 17 GIVLDSG------CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
G++LD G + ++ K G E +F E + L P Y L
Sbjct: 209 GMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVF--DEMMREGLAPDGVS-YNTLVGGY 265
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+G + E L F +M +KGI+ D + SLI ++ A L ++ E+G+ +
Sbjct: 266 CKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNE 325
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ + ++G ++ L V M+ + S ++NG+ A ++ +
Sbjct: 326 VTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHE 385
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ ++G P VTY++II+AYC+ A ++ +M +KG + YSS++ + + R
Sbjct: 386 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKR 445
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLEKYTTVISA 298
+ DA L M G +P+ + Y SL+D H + N+ R L + ++ A
Sbjct: 446 LSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKA 494
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 16/262 (6%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D + + Y IL +L G E L RDM+ G + Y +L+ +F EV
Sbjct: 144 DGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDG 203
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
AE L + G+ +L F +V + G +E +V + M L +V
Sbjct: 204 AERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVG 263
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G+ K A+ V+ ++ +G +P VT+ S+I+ C+ G A + +M+++G
Sbjct: 264 GYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQM 323
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL- 289
V +++++ + K G + DA+ V M+ +P+V YN+L++ M GR R+L
Sbjct: 324 NEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELL 383
Query: 290 ------------EKYTTVISAY 299
Y+T+ISAY
Sbjct: 384 HEMEAKGLKPDVVTYSTIISAY 405
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 28/266 (10%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSST--HMYKILCDSLGKSGRAFEI 79
CY ++ + +G ++ L E E++ L D+ ST Y CD+ AFE+
Sbjct: 362 CYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT----HSAFEL 417
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+ M EKG+L D Y+SLI + A LFK + G+ D + L+
Sbjct: 418 ---NQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 474
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
+ +EG VE+ L + + M A + + D ++ V++NG SK A ++ +L + IP
Sbjct: 475 HCKEGNVERALSLHDKMVKAGV-LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIP 533
Query: 199 GQVTYASIIN---------------AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
Y ++++ +C GL ++A+KV+ M + ++ YS ++
Sbjct: 534 ANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIH 593
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPN 269
+ + G + A+ +M +G PN
Sbjct: 594 GHCRAGNVMKALSFHKQMLQRGFAPN 619
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 1/193 (0%)
Query: 95 PSVYA-SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
PSV A + + S A + A F G+ ++ + L+ G ++ L ++
Sbjct: 114 PSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSIL 173
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M+ A + +V F + A ++ ++ G P VT+ S++N C+
Sbjct: 174 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKA 233
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G A KVF EM ++G V+Y+++V Y K G +A+ + A+M KG P+V +
Sbjct: 234 GKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF 293
Query: 274 NSLMDMHGRAKNL 286
SL+ + +A NL
Sbjct: 294 TSLIHVMCKAGNL 306
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G +P + Y +++ A L S A + F M G V Y+ ++ G ++A
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ ++ M+ GC PNV YN+L+ RA + E+
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAER 206
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 147/332 (44%), Gaps = 32/332 (9%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSST--HMYKI 65
+++M+ + D Y ++ +F K G ++ + E ++ DL S + +
Sbjct: 157 FDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRK 216
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
LCD +A I F +K GI D Y S+I F + A L E E G
Sbjct: 217 LCDY----SKAISI---FMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVG 269
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAA 184
+L D + L+ +Y+E + L V M A ++ D ++C ++++ + + A
Sbjct: 270 VLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSL-DLMTCNIMIDVYGQLDMVKEA 328
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++ + G P V+Y +++ Y L+ +A +F MQ+K ++ VV Y++M+ +
Sbjct: 329 DRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 388
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
YGK+ A LV +M+ +G EPN Y+T+IS + A +
Sbjct: 389 YGKSLEHEKATNLVQEMQKRGIEPNAI-------------------TYSTIISIWGKAGK 429
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
D + + R +G ID+ + M+ + +
Sbjct: 430 LDRAAMLFQKLRSSGVEIDQVLYQTMIVAYER 461
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 129/277 (46%), Gaps = 3/277 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + ++M+ + D Y ++E K+ D K ++F+ ++ +TP Y +
Sbjct: 189 LFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRL--KRSGITPDLV-AYNSM 245
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ GK+ E +M+E G+L D Y++L+ + + A +F E E
Sbjct: 246 INVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANC 305
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
DL ++ +Y + MV++ + SM+ + + ++ + + + A+
Sbjct: 306 SLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIH 365
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ + + VTY ++I Y + + KA + EMQ++G + + YS++++++G
Sbjct: 366 LFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWG 425
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
K G++ A L K++ G E + +Y +++ + RA
Sbjct: 426 KAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERA 462
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V++ + + + A +++++ + P + TY+++I ++ + G++ ++ +M+Q
Sbjct: 139 VVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQD 198
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+V YS+++ + K A+ + ++K G P++ YNS++++ G+A+ R+
Sbjct: 199 RVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGKARLFREA 258
Query: 290 E----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
Y+T++S Y +F + + E +D IM+ V
Sbjct: 259 RMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDV 318
Query: 334 FSKLSQIEE 342
+ +L ++E
Sbjct: 319 YGQLDMVKE 327
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/359 (19%), Positives = 140/359 (38%), Gaps = 60/359 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC-----ESRKLDLTPSSTHMYK 64
+ ++K +GI D Y ++ F K A LF E E R++ + P + Y
Sbjct: 227 FMRLKRSGITPDLVAYNSMINVFGK-------ARLFREARMLVHEMREVGVLPDTVS-YS 278
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L ++ + E L F +M E D +I + + VK A+ LF +
Sbjct: 279 TLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKM 338
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ ++ + L+ +Y E + + + + M+ E+ + ++ + K + A
Sbjct: 339 GIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 398
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ +++ +G P +TY++II+ + + G +A +F +++ G + V Y +M+
Sbjct: 399 TNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVA 458
Query: 245 YGKTGRIRDAMRLVAKMK-----PKGC-----------EPNVWIYNSLMDM--------- 279
Y + G + A RL+ +K P+ E W++ D
Sbjct: 459 YERAGLVAHAKRLLHDLKCPDIIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVF 518
Query: 280 ---------HGRAKNLRQL-------------EKYTTVISAYNMAREFDMCVKFYNEFR 316
+ R N+ ++ + V++AY REF+ Y E +
Sbjct: 519 RCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIALVLNAYGKLREFEKADAVYREMQ 577
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + GKS + ++M+++GI + Y+++I + ++ A LF++
Sbjct: 382 YNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLR 441
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG-------- 174
G+ D ++ +++ Y G+V ++ +K ++ D ++
Sbjct: 442 SSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKILARAGRIEEATW 501
Query: 175 -----------------------FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
FS+ + V+V+E++ G P A ++NAY
Sbjct: 502 VFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIALVLNAYG 561
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVA---YSSMVAMYG 246
++ + KA+ V+ EMQ+ ++CV + M+++YG
Sbjct: 562 KLREFEKADAVYREMQE---EECVFPDEVHFQMLSLYG 596
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 11/223 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
++K++S+G+ +D Y ++ A+ + G L L+C D+ P T + KIL
Sbjct: 437 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKCP----DIIPRDTAI-KIL- 490
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++GR E FR + G ++D SV+ +I F+ E+F++ G
Sbjct: 491 ---ARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYF 547
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D +V ++ Y + EK V M+ E D + +++ + R+ + +
Sbjct: 548 PDSDVIALVLNAYGKLREFEKADAVYREMQEEECVFPDEVHFQMLSLYGARKDFIMVESL 607
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+E+L S I + + + + Y R + A ++ M ++G
Sbjct: 608 FEKLDSDPNINKKELHLVVASIYERQNRLNDASRIMNRMSKEG 650
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 38/259 (14%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEI 79
+ G Y ++ K+G + LF + S + S Y + +SL +G+ E
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDS---YMSMLESLCGAGKTIEA 426
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
++ + EKG++ D +Y ++ + + ++ +LF++ ++ G D+ + L+
Sbjct: 427 IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIAS 486
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G V++ A+ ++E+L C P
Sbjct: 487 FGRVGEVDE-----------------------------------AINIFEELERSDCKPD 511
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
++Y S+IN + G +A F EMQ+KG + VV YS+++ +GKT R+ A L
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFE 571
Query: 260 KMKPKGCEPNVWIYNSLMD 278
+M KGC+PN+ YN L+D
Sbjct: 572 EMLVKGCQPNIVTYNILLD 590
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 5/199 (2%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ T MY + +LGK + I F MK+ G D Y LI SF + EV A +
Sbjct: 440 TDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINI 499
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F+E E D+ + L+ + G V++ + M+ LN ++ F K
Sbjct: 500 FEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGK 559
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A ++E+++ +GC P VTY +++ + G ++A ++ +M+Q+G +
Sbjct: 560 TERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSIT 619
Query: 238 YSSMVAM----YGKTGRIR 252
Y+ + + +GK+ RIR
Sbjct: 620 YTVLERLQSVSHGKS-RIR 637
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 35/223 (15%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L +L K G E + F DM + + Y S++ S + A E+ +
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
EKG++ D +MY + + K +
Sbjct: 434 HEKGVVTD-------TMMY----------------------------NTVFSALGKLKQI 458
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
++E++ G P TY +I ++ R+G +A +F E+++ +++Y+S+
Sbjct: 459 SHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSL 518
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+ GK G + +A +M+ KG P+V Y++LM+ G+ +
Sbjct: 519 INCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTE 561
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 142/350 (40%), Gaps = 68/350 (19%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR----KLDLTPSSTHMYKILCD 68
+K + ++S Y +++A+ + D K ++ CE R KLD+ Y +L D
Sbjct: 194 VKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVY--CEIRRGGHKLDI-----FAYNMLLD 246
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+L K +A ++ F DMK++ D Y +I + I + A LF E +G+
Sbjct: 247 ALAKDEKACQV---FEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTL 303
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + L+ + + MV+K A++V+
Sbjct: 304 NVVGYNTLMQVLAKGKMVDK-----------------------------------AIQVF 328
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ GC P + TY+ ++N G + + V +E+ ++ + + YS +V K
Sbjct: 329 SRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGV-VEISKRYMTQGI--YSYLVRTLSKL 385
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-MHGRAKNLRQLE---------------KY 292
G + +A RL M + Y S+++ + G K + +E Y
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
TV SA ++ + + + +G D I++ F ++ +++E
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDE 495
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 39/201 (19%)
Query: 5 SKLH-YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
S +H +EKMK G D Y ++ +F ++G+ ++ +F E E + D P Y
Sbjct: 459 SHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE--RSDCKPDIIS-Y 515
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + LGK+G E F++M+EKG+ D Y++L+ F V++A LF+E
Sbjct: 516 NSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLV 575
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG ++ + NI + C+ NG +
Sbjct: 576 KGCQPNIVTY----------------------------NI--LLDCLEKNGRTAE----- 600
Query: 184 AVKVYEQLISQGCIPGQVTYA 204
AV +Y ++ QG P +TY
Sbjct: 601 AVDLYSKMKQQGLTPDSITYT 621
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 13/284 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH----MYKI 65
+++M G+ D CY +++ F + GD K ++ K LT SS + Y I
Sbjct: 207 FDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIW------KRLLTESSVYPSVETYNI 260
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+ + L K G+ E ++ + MK+ D ++S+I + AE++F+E E G
Sbjct: 261 MINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESG 320
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRAYWAA 184
+ D+ + ++ G + K E+ M KN NI +++ G + A
Sbjct: 321 LSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVS--YNMLIQGLLDNKKVEQA 378
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ L +G TY +IN C+ G +KA ++ E + +G D AYSSMV
Sbjct: 379 ICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHG 438
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
K G + A+ L+ +MK + N ++NSL++ + RA L +
Sbjct: 439 LCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEE 482
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 125/272 (45%), Gaps = 6/272 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M +G+ D Y ++ ++ G K L+ + Y +L
Sbjct: 313 FQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC----CNIVSYNMLIQG 368
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + + + + +++ + E+G+ D + Y LI + A + +EAE +G D
Sbjct: 369 LLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLD 428
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ +V ++GM+E+ +E++ MK ++ + ++NG+ + A+ V
Sbjct: 429 TFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLR 488
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ S+ C P V+Y +IIN C+ +S A EM ++G ++ YS ++ +
Sbjct: 489 EMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGE 548
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ A+ L + K +P++ ++N + +HG
Sbjct: 549 KVDMALNLWHQCINKRLKPDLQMHNII--IHG 578
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 112/271 (41%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L E+ ++ G LD+ Y ++ K G E+ L + + + L ++H++ L
Sbjct: 414 LRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKL---NSHVFNSL 470
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ ++ + E + R+MK K Y ++I A KE E+G+
Sbjct: 471 INGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGL 530
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ V+ L + N L + +I++G + A++
Sbjct: 531 KPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALE 590
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ Q+ C+P VT+ +I+ + G +A K++ + + G +++Y+
Sbjct: 591 IFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLC 650
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R+ DA+ + +G PN +N L+
Sbjct: 651 SCARVSDAIEFLYDALDRGILPNAPTWNVLV 681
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/305 (19%), Positives = 125/305 (40%), Gaps = 51/305 (16%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE-A 121
Y L ++L KSG + ++ F +M +G+ D Y LI F + A E++K
Sbjct: 187 YGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLL 246
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E + +E + ++ + G +++++E+ MK E + +++G SK +
Sbjct: 247 TESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNF 306
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM--------------- 226
AA KV++++I G P TY ++++ R G +K +++ M
Sbjct: 307 NAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLI 366
Query: 227 -------------------QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
++G Y ++ K G + A+R++ + + +G +
Sbjct: 367 QGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGAD 426
Query: 268 PNVWIYNSLMD--------------MHGRAKNLRQLEK--YTTVISAYNMAREFDMCVKF 311
+ + Y+S++ +H KN R+L + ++I+ Y A + + +
Sbjct: 427 LDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISV 486
Query: 312 YNEFR 316
E +
Sbjct: 487 LREMK 491
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 99/220 (45%), Gaps = 1/220 (0%)
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
FF + G+ + Y LI + + + L E G+ D+ + L+
Sbjct: 136 FFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALA 195
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI-PGQ 200
+ G + +E+ + M +N ++++GF ++ + A +++++L+++ + P
Sbjct: 196 KSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSV 255
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
TY +IN C++G ++ +++ M++ + +SSM+ K G A ++ +
Sbjct: 256 ETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQE 315
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
M G P+V YN+++ R L + + V+S N
Sbjct: 316 MIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNN 355
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSKRRAYWAAV 185
+V L + Y + M ++ L + ++M ++I C + ++N F + + A
Sbjct: 79 DVALSAIKAYAKCSMPDQALNLFQNM----VDIFGCNPGIRSFNSMLNAFIESNQWREAE 134
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ + G P TY +I C+ + K + + M + G + +++Y +++
Sbjct: 135 LFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINAL 194
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+G + DA+ L +M +G P+V YN L+D
Sbjct: 195 AKSGNLLDAVELFDEMSVRGVNPDVMCYNILID 227
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G E LK R+ +G+ + Y LI F E VA +L E +G D+
Sbjct: 233 REGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMI 292
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
L+ + G V L V E M ++ I V+++G K+R AA + E++
Sbjct: 293 TLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEM 352
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ Q P + Y ++I+ + R S A K+F M++K +VAY+ M+ Y K G +
Sbjct: 353 LEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACPD-IVAYNVMIKGYCKFGMM 411
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
++A+ ++ M+ GC P+ + Y +L+D + + ++
Sbjct: 412 KEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDI 446
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 110/239 (46%), Gaps = 6/239 (2%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++Y +L L K +M E+ + D +Y +LI F ++ A ++
Sbjct: 324 PDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKI 383
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F+ EEK D+ + ++ Y + GM+++ + + SM+ A + +V+G++K
Sbjct: 384 FEFMEEKA-CPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAK 442
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A++++ ++ + C P TYAS+I YC IG AE +F +MQ +G VV
Sbjct: 443 KGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVH 502
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN----VWIYNSLMD-MHGRAKNLRQLEK 291
Y+ ++ K ++ A M C PN ++ N L++ HG + R K
Sbjct: 503 YTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTK 561
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 125/296 (42%), Gaps = 17/296 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D + G L +M+ KGI+ Y ++I ++ E L E
Sbjct: 119 YNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMR 178
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G+ +++++ ++ + + +++ M + N ++ GF +
Sbjct: 179 ARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVR 238
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+K+ + I +G P Q++Y +I+ +C G A + +EM +G ++ +++
Sbjct: 239 EALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALI 298
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAKNLRQ--LEK--- 291
+G++ DA+ + KM + P+ IYN L+ M AKNL + LE+
Sbjct: 299 HGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQ 358
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YTT+I + + + K + EF D +M+ + K ++E
Sbjct: 359 PDKFIYTTLIDGFVRSDKLSDARKIF-EFMEEKACPDIVAYNVMIKGYCKFGMMKE 413
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%)
Query: 160 ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
E D +CV+V G + E +GC+PG V Y +I+ YCR G +
Sbjct: 76 EGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRG 135
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ EM+ KG VV Y +++ G+ G + L+ +M+ +G PNV IYN++++
Sbjct: 136 LLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVIN 194
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 112/254 (44%), Gaps = 6/254 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ F G++ + L +E R TP + L L SG+ + L
Sbjct: 259 YTPLIHGFCVRGEAMVASDLLVEMMGR--GHTPDMITL-GALIHGLVVSGQVNDALIVRE 315
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M E+ ++ D ++Y LI + A+ L +E E+ + D ++ L+ ++
Sbjct: 316 KMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSD 375
Query: 145 MVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
+ ++ E M+ E D ++ V++ G+ K AV + GCIP + TY
Sbjct: 376 KLSDARKIFEFME--EKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTY 433
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
++++ Y + G S + ++ +M ++ + Y+S++ Y G A L AKM+
Sbjct: 434 TTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQS 493
Query: 264 KGCEPNVWIYNSLM 277
+G PNV Y L+
Sbjct: 494 EGLFPNVVHYTVLI 507
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 18/211 (8%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D K G L+ DM ++ + YASLIC + +I + AE+LF + +
Sbjct: 433 YTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQ 492
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF------- 175
+G+ ++ + L+ ++ V + E M +D +VNG
Sbjct: 493 SEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGM 552
Query: 176 ------SKRRAY--WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
++A+ A + V+ LIS G P Y +II + CR + KA + +M
Sbjct: 553 VNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMS 612
Query: 228 QKGFDKCVVAYSSMVAMY---GKTGRIRDAM 255
KG + + S++ + G++G+ R A+
Sbjct: 613 NKGCLPDPITFLSLLYGFSSAGESGKWRSAL 643
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 86/193 (44%), Gaps = 2/193 (1%)
Query: 89 KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
+G + Y LI + ++ L E E KG++ + + ++ +G + K
Sbjct: 110 EGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTK 169
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
++ M+ L+ + I ++N K R+ A + Q++ P VT+ ++I
Sbjct: 170 VESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIA 229
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+CR G +A K+ E ++G + ++Y+ ++ + G A L+ +M +G P
Sbjct: 230 GFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTP 289
Query: 269 NVWIYNSLMDMHG 281
++ +L +HG
Sbjct: 290 DMITLGAL--IHG 300
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 113/218 (51%), Gaps = 2/218 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H +L +SL K+ + K ++ M G++ + ++ LI + +V+ AE+L E
Sbjct: 163 HACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNE 222
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
E + + DL + L+ +Y ++GM + L + + M+ ++ ++ GF +
Sbjct: 223 MESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGR 282
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A++++ ++ G P VTY ++I+ YCR+ +A ++ M+ +G VV Y+S
Sbjct: 283 MREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNS 340
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ + G+I+DA RL+ +M + EP+ N+L++
Sbjct: 341 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLIN 378
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 129/325 (39%), Gaps = 36/325 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+KM G+V + + ++ A K GD EK L E ESR Y L
Sbjct: 185 YKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESR---FIFPDLFTYNTLISL 241
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE------ 123
K G +E L M+ G+ D Y SLI F ++ A LF+E
Sbjct: 242 YCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNHV 301
Query: 124 ------KGMLR--DLEVFLKL------------VLMY-------IEEGMVEKTLEVVESM 156
G R DLE L+L V+ Y EEG ++ ++ M
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
++ + ++N + K +A+KV ++++ G P Q T+ ++I+ +C++
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A++ EM GF YS +V Y +RL ++ KG ++ +Y +L
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481
Query: 277 MDMHGRAKNLRQLEKYTTVISAYNM 301
+ + + E+ T++ M
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGM 506
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
++ LV+ Y M + ++V E M+ V++N +K R KVY++
Sbjct: 128 QILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKK 187
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G +P + +I+A C+ G KAE++ EM+ + + Y++++++Y K G
Sbjct: 188 MVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGM 247
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--------------YTTVI 296
+A+ + +M+ G P++ YNSL+ R +R+ + YTT+I
Sbjct: 248 HYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNHVTYTTLI 307
Query: 297 SAY 299
Y
Sbjct: 308 DGY 310
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAAL--FLECESRKLDLTPSSTHMYKILCDSLGKSG 74
G + Y +++ + ++ D E+ L +E E L P Y + L + G
Sbjct: 295 GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEG----LHPGVV-TYNSILRKLCEEG 349
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+ + + +M E+ + D +LI ++ I ++ A ++ K+ E G+ D F
Sbjct: 350 KIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFK 409
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ + + V+ E + M +A + S +V+ + + A +++ ++L +
Sbjct: 410 ALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRK 469
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G Y ++I C+I AE++F MQ KG V Y+S+ Y K G+ A
Sbjct: 470 GLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAA 529
Query: 255 MRLVAKMKPK 264
++ +M +
Sbjct: 530 SDMLDEMDKR 539
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 129/268 (48%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++KM G+V ++ Y +++ + GD E+ A E K + PS + Y +L +
Sbjct: 320 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLER--AFSYRDEMVKKGIMPSVS-TYNLLVHA 376
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L GR E ++M++KGI+ D Y LI ++ K A +L E KG+
Sbjct: 377 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 436
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + +++ ++ E + + ++ + +V+G A + +
Sbjct: 437 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 496
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + P +VT+ +++ CR G +A + EM+++G ++Y+++++ YG+ G
Sbjct: 497 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRG 556
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
I+DA R+ +M G P + YN+L+
Sbjct: 557 DIKDAFRVRDEMLSIGFNPTLLTYNALI 584
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 131/278 (47%), Gaps = 3/278 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M+ GI DS Y ++ K G E+ + LF + ++ L P++ Y L D
Sbjct: 286 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV--EIGLVPNAV-TYNTLIDGY 342
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G + +M +KGI+ S Y L+ + + A+++ KE +KG++ D
Sbjct: 343 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 402
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ Y G +K ++ M + + + ++ S+R A ++E+
Sbjct: 403 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 462
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ QG P + + ++++ +C G +A + EM +K V +++++ + G+
Sbjct: 463 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 522
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ +A L+ +MK +G +P+ YN+L+ +GR +++
Sbjct: 523 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKD 560
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 122/278 (43%), Gaps = 3/278 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK GIV ++ F K+ E L+ E ++ S+ + + I+ + L K
Sbjct: 183 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRIS---STVYTFNIMVNVLCK 239
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G+ + +F M+ G + Y ++I ++S ++ A + KG+ D
Sbjct: 240 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 299
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ +EG +E+ + + M L + +++G+ + A ++++
Sbjct: 300 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 359
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G +P TY +++A G +A+ + EM++KG + Y+ ++ Y + G +
Sbjct: 360 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 419
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
A L +M KG EP Y SL+ + R +++ +
Sbjct: 420 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 457
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 3/242 (1%)
Query: 44 LFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLIC 103
LF E + L+ S+ ++ +L + RA E K F MKEKGI+ ++
Sbjct: 141 LFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLS 200
Query: 104 SFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI 163
F + +++A L+ E + + F +V + +EG ++K E + M+
Sbjct: 201 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKP 260
Query: 164 SDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
+ I++G+S R A ++ + + +G P TY S+I+ C+ G +A +F
Sbjct: 261 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 320
Query: 224 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MH 280
+M + G V Y++++ Y G + A +M KG P+V YN L+ M
Sbjct: 321 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME 380
Query: 281 GR 282
GR
Sbjct: 381 GR 382
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 11/273 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILC 67
+ +M G D Y ++ K G++ L + E + K +L Y +
Sbjct: 185 FNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVA-----YTTII 239
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
DSL K + + +M ++GI D Y++++ F S+ + A LF E + ++
Sbjct: 240 DSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVM 299
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ F LV +EGMV + V E+M K AE N +++G+ A
Sbjct: 300 PNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAY--TYNALMDGYCLNNQMDEAQ 357
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
KV + ++ +GC P +Y +IN YC+ +A+ + +EM +K V YS+++
Sbjct: 358 KVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGL 417
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ GR ++A+ L +M G P++ Y++L+D
Sbjct: 418 CQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLD 450
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 111/237 (46%), Gaps = 1/237 (0%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
KL + P + + L + G E + F +M +G D Y+++I
Sbjct: 155 KLGIQPDAI-TFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNT 213
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+A +L ++ EEKG +L + ++ ++ +V ++++ M + + I
Sbjct: 214 SMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTI 273
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++GF A ++ +++ + +P VT+ +++ C+ G+ S+A VF M +KG
Sbjct: 274 LHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGA 333
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ Y++++ Y ++ +A +++ M KGC P V YN L++ + + + L +
Sbjct: 334 EPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDE 390
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 2/230 (0%)
Query: 51 RKLDLTPSSTHMY--KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
++DL + ++Y IL + L + + M + GI D + +LI
Sbjct: 116 NQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIE 175
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
E+K A LF E +G D+ + ++ + G L+++ M+ +
Sbjct: 176 GEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAY 235
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
I++ K A+ + +++ +G P VTY++I++ +C +G ++A +F EM
Sbjct: 236 TTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVG 295
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ V ++ +V K G + +A + M KG EPN + YN+LMD
Sbjct: 296 RNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMD 345
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 103/222 (46%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y IL + K R E +M EK + D Y++L+ + + A LFKE
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKE 432
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G+L DL + L+ + G +++ L++++SM+ +++ + +++ G
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGK 492
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +++ +L + G P TY +I + GL +A ++F +M+ GF +Y+
Sbjct: 493 LEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNV 552
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
++ + + A+RL+ +M K + + L+D+ R
Sbjct: 553 IIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESR 594
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 3/262 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M GI D Y I+ F +G + LF E R ++ P+ T + IL D L
Sbjct: 257 EMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR--NVMPN-TVTFTILVDGLC 313
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G E F M +KG + Y +L+ + ++ A+++ +KG +
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVH 373
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ Y + +++ ++ M EL ++ G + A+ +++++
Sbjct: 374 SYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEM 433
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S G +P +TY+++++ C+ G +A K+ MQ+ + +V Y+ ++ G++
Sbjct: 434 CSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKL 493
Query: 252 RDAMRLVAKMKPKGCEPNVWIY 273
A L +K+ G +P + Y
Sbjct: 494 EVAKELFSKLFADGIQPTIRTY 515
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 137/300 (45%), Gaps = 23/300 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSST-HMYKI 65
Y+ M AG+V D Y ++ A + G SEKV A + + +L+ SS H Y
Sbjct: 497 YKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYA- 555
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV-AEELFKEAEEK 124
+G+ E + F + G +E +V + S +++ + E F E +
Sbjct: 556 -------NGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRR 608
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ D+ ++ +Y + MV K E++ M S ++ +S+ + +
Sbjct: 609 GISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKS 668
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ +++ +G P +++Y ++I AYCR G +A ++F EM+ VV Y++ +A
Sbjct: 669 EEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIAT 728
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR----------AKNLRQLEKYTT 294
Y +A+ +V M +GC+P+ YNS++D + + KNL L+ + +
Sbjct: 729 YAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSFVKNLSNLDPHVS 788
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA-EVKVAEELFKEA 121
Y L ++ SGR + + F M++ G Y ++ + + L +
Sbjct: 196 YTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAM 255
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+G+ DL + L+ + E+ + + + MK +++ F K R
Sbjct: 256 RSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRP 315
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+KV +++ + G P VTY S+I+AY + GL +A + +M KG V Y+++
Sbjct: 316 QEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTL 375
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
++ + K G+ A+++ +M+ GC+PN+ +N+L+ MHG ++ K I N
Sbjct: 376 LSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNC 435
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGI 329
+ + F NG +D ++GI
Sbjct: 436 SPDIVTWNTLLAVFGQNG--MDSQVSGI 461
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 138/321 (42%), Gaps = 21/321 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD-LTPSSTHMYKILCDS 69
E M+S G+ D Y ++ + E+ LF + KL+ TP Y L D
Sbjct: 253 EAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLF---QQMKLEGFTPDKV-TYNALLDV 308
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GKS R E +K ++M+ G Y SLI ++A ++ A +L + KG+ D
Sbjct: 309 FGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPD 368
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + G + ++V M+ + C ++ R + +KV++
Sbjct: 369 VFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFD 428
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ C P VT+ +++ + + G+ S+ +F EM++ GF ++++++ Y + G
Sbjct: 429 DIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCG 488
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YT 293
AM + M G P++ YN+++ R Q EK Y+
Sbjct: 489 SFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYS 548
Query: 294 TVISAYNMAREFDMCVKFYNE 314
+++ AY +E + F E
Sbjct: 549 SLLHAYANGKEIERMNAFAEE 569
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 152/383 (39%), Gaps = 56/383 (14%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M GI D Y ++ F K G + +FLE R + P+ + L G
Sbjct: 359 QMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEM--RAVGCKPNIC-TFNALIKMHG 415
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
G+ E++K F D+K D + +L+ F +FKE + G + + +
Sbjct: 416 NRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERD 475
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW-AAVKVYEQ 190
F L+ Y G ++ + V +SM A + + D + V R W + KV +
Sbjct: 476 TFNTLISAYSRCGSFDQAMAVYKSMLEAGV-VPDLSTYNAVLAALARGGLWEQSEKVLAE 534
Query: 191 LISQGCIPGQVTYASIINAYC-----------------------------------RIGL 215
+ C P +++Y+S+++AY + L
Sbjct: 535 MEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDL 594
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+ E+ F+E++++G + ++M+++YG+ + A ++ M P++ YNS
Sbjct: 595 LIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNS 654
Query: 276 LMDMHGRAKNLRQ--------LEK--------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
LM M+ R++N ++ LEK Y TVI AY + ++E + +
Sbjct: 655 LMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSA 714
Query: 320 GVIDRAMAGIMVGVFSKLSQIEE 342
V D + ++ S E
Sbjct: 715 LVPDVVTYNTFIATYAADSMFAE 737
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 109/222 (49%), Gaps = 1/222 (0%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ T + IL L G+A + ++ M G L D Y +LI F E+K A E+
Sbjct: 204 NDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEM 263
Query: 118 FKEAEEK-GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
F + + G D+ + ++ Y + G +++ +++ M + ++ V+V+G++
Sbjct: 264 FDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A ++ ++IS GC P VT+ S+I+ YCR+G ++ +++ EM +G
Sbjct: 324 KAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAF 383
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
YS ++ K R+ A L+ ++ K P ++YN ++D
Sbjct: 384 TYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 120/294 (40%), Gaps = 37/294 (12%)
Query: 30 EAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEK 89
E K+ ++ + F E KL++ S Y +L SL K+G + F MK
Sbjct: 74 EVVKKLDNNPHIGFRFWEFSRFKLNIR-HSFWTYNLLTRSLCKAGMHDLAGQMFECMKSD 132
Query: 90 GILEDPSVYASLICSFA---------------------------------SIAEVKVAEE 116
GI + + L+ SFA + V+ A +
Sbjct: 133 GISPNSRLLGFLVSSFAEKGKLHCATALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMK 192
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGF 175
LF+E D + F L+ G EK +E++ M + D ++ ++ GF
Sbjct: 193 LFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGC-LPDIVTYNTLIKGF 251
Query: 176 SKRRAYWAAVKVYEQL-ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K A ++++ + S GC P VTY S+I+ YC+ G +A + +M + G
Sbjct: 252 CKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPT 311
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
V ++ +V Y K G + A + KM GC P+V + SL+D + R + Q
Sbjct: 312 NVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQ 365
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 2/265 (0%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G + D Y +++ F K + +K +F + +S +P Y + K
Sbjct: 232 MSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSS-GCSPDVV-TYTSMISGYCK 289
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G+ E DM GI + L+ +A E+ AEE+ + G D+
Sbjct: 290 AGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVT 349
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F L+ Y G V + + E M + + +++N K A ++ QL
Sbjct: 350 FTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLA 409
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S+ IP Y +I+ +C+ G ++A + EM++K + ++ ++ + GR+
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLM 277
+A+ + KM GC P+ +SL+
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLL 494
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 109/243 (44%), Gaps = 3/243 (1%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
S+G D Y ++ + K G ++ A++ L+ + +L + P++ + +L D K+G
Sbjct: 270 SSGCSPDVVTYTSMISGYCKAGKMQE-ASVLLD-DMLRLGIYPTNV-TFNVLVDGYAKAG 326
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+ M G D + SLI + + +V L++E +GM + +
Sbjct: 327 EMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYS 386
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ +E + K E++ + + ++ + +++GF K A+ + E++ +
Sbjct: 387 ILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKK 446
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
C P ++T+ +I +C G +A +F +M G + SS+++ K G ++A
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Query: 255 MRL 257
L
Sbjct: 507 YHL 509
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 1/234 (0%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
+P +T + IL L + G + + F M+ G L D Y +LI E+ A
Sbjct: 194 SPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRAC 253
Query: 116 ELFKEAEEKGMLR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+L KE + + D+ + ++ + + G +E + E M + + + V+++G
Sbjct: 254 DLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDG 313
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K AA ++E++ S CIP VT+ S+I+ YCR G KV+ M+ +
Sbjct: 314 FGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPN 373
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ YS ++ K RI +A L+ ++K P +IYN ++D +A N+ +
Sbjct: 374 IYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDE 427
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 2/268 (0%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M+S G + D Y ++ K + ++ L E +SR D +P Y +
Sbjct: 221 FNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRN-DCSPD-VMTYTSIISG 278
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G+ F +M GI + LI F I + AE + ++ + D
Sbjct: 279 FRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPD 338
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ Y G + L+V + MK ++ + VI+N K A +
Sbjct: 339 VVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLR 398
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
QL P Y +I+ +C+ G +A + EM++K V ++ ++ + G
Sbjct: 399 QLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKG 458
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R+ +A+ + KM GC P+ +SL+
Sbjct: 459 RMVEALDIFKKMLAIGCAPDNITISSLV 486
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 122/291 (41%), Gaps = 39/291 (13%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+S G ++DS ++ +F + G + L +E + + + S+ +Y L + L K
Sbjct: 119 MRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQGEEARI---SSFVYNYLLNELVK 175
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G+ E + F++ + + LI + EV+ ELF + G L D+
Sbjct: 176 GGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVT 235
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ +G K A + +++
Sbjct: 236 YNTLI-----------------------------------SGLCKANELDRACDLLKEVQ 260
Query: 193 SQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S+ C P +TY SII+ + ++G A +F EM + G + VV ++ ++ +GK G +
Sbjct: 261 SRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNM 320
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
A + KM C P+V + SL+D + R ++R K V+ A N++
Sbjct: 321 VAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVS 371
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 95/225 (42%), Gaps = 13/225 (5%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGI------------LEDPSVYASLICSFASIAEVKV 113
L + L AFE++K + + G+ + S Y LI S + +
Sbjct: 52 LSEKLNDPLVAFEVIKRLNNNPQVGLKFMEFCRLNFSLIHCFSTYELLIRSLCQMGLHDL 111
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
E + G L D V LV + + G + +++ ++ E IS + ++N
Sbjct: 112 VEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLN 171
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
K A+ ++++ ++ P T+ +I CR+G K ++F MQ G
Sbjct: 172 ELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLP 231
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG-CEPNVWIYNSLM 277
VV Y+++++ K + A L+ +++ + C P+V Y S++
Sbjct: 232 DVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSII 276
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 135/270 (50%), Gaps = 7/270 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E MKS+ + + + ++E++ + +++ ++ ++ + L P TH Y + + L
Sbjct: 107 EDMKSSRCEMGTSTFLILIESYAQFELQDEILSV-VDWMIDEFGLKPD-THFYNRMLNLL 164
Query: 71 --GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G S + EI M GI D S + LI + +++ A + ++ G++
Sbjct: 165 VDGNSLKLVEISH--AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVP 222
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + F ++ YIEEG ++ L + E M + S+ VIV+GF K A+
Sbjct: 223 DEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 189 EQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++ +Q G P Q T+ +++N C+ G A ++ M Q+G+D V Y+S+++ K
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G +++A+ ++ +M + C PN YN+L+
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 146/348 (41%), Gaps = 55/348 (15%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G D Y ++ K+G+ ++ + + +R D +P+ T Y L +L K
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR--DCSPN-TVTYNTLISTLCK 377
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ E + R + KGIL D + SLI +VA ELF+E KG D
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ +G +++ L +++ M EL+
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQM---ELS------------------------------ 464
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
GC +TY ++I+ +C+ +AE++F EM+ G + V Y++++ K+ R+
Sbjct: 465 --GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVI 296
DA +L+ +M +G +P+ + YNSL+ R ++++ + Y T+I
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Query: 297 SAYNMAREFDMCVKFYNEFRMNG-GVIDRAMAGIMVGVFSKLSQIEEL 343
S A ++ K +M G + A ++ G+F K E +
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 136/294 (46%), Gaps = 4/294 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M S G+V D + +M+ + + GD + AL + + + + S+ + ++
Sbjct: 213 EDMPSYGLVPDEKTFTTVMQGYIEEGDLD--GALRIREQMVEFGCSWSNVSV-NVIVHGF 269
Query: 71 GKSGRAFEILKFFRDM-KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K GR + L F ++M + G D + +L+ VK A E+ ++G D
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ + G V++ +EV++ M + + + +++ K A ++
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L S+G +P T+ S+I C + A ++F EM+ KG + Y+ ++ G
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
++ +A+ ++ +M+ GC +V YN+L+D +A R+ E+ + + ++R
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 3/256 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+ S GI+ D + +++ + LF E S+ + Y +L DSL
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE---PDEFTYNMLIDSLCS 447
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G+ E L + M+ G Y +LI F + + AEE+F E E G+ R+
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + VE ++++ M ++ F + A + + +
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S GC P VTY ++I+ C+ G A K+ +Q KG + AY+ ++ + +
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627
Query: 253 DAMRLVAKMKPKGCEP 268
+A+ L +M + P
Sbjct: 628 EAINLFREMLEQNEAP 643
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 5/285 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
NS+ L +M + D + I++A+ +IGD ++ + F K+ +P++
Sbjct: 39 NSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHF----RGKMWCSPTA-F 93
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL L + R E + +M +K D +VY LI + ++ A + K
Sbjct: 94 TYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMM 153
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E+ + D+ + L++ + +++ +++E MK + L ++NG K+
Sbjct: 154 LERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQL 213
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
K+ E+++ G P +Y +++ C G Y +A K+ +M +K VV Y+S+
Sbjct: 214 EEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSL 273
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ + K ++ +A RL+ M + C P V Y +L+ RA L
Sbjct: 274 MDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRL 318
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 7/280 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTHMYKILCD 68
EKMK +G+ D+ Y ++ K E+V+ L E R+ D T Y +
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPD-----TFSYNTVVA 240
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L +SG+ E K M EK D Y SL+ F ++++ AE L ++ +
Sbjct: 241 CLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAP 300
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ + + V+E M A ++ +++G K A ++
Sbjct: 301 TVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELL 360
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E ++ + C P VTY+ ++N C++G A + M ++G +V +++M+ + K
Sbjct: 361 EVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKA 420
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G++ + +++ MK C P+V Y++L+D + +A ++
Sbjct: 421 GKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQD 460
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 22/249 (8%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGR---AFEILKFFRDMKEKG 90
K+ + KV L +++ TP Y L D K+ R AF IL G
Sbjct: 422 KVDEGHKVLELM-----KEVSCTPDVV-TYSTLIDGYCKANRMQDAFAIL---------G 466
Query: 91 ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV--LMYIEEGMVEK 148
I D + Y+S++ S +V+ A+E+ ++G + ++ L +E G
Sbjct: 467 ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEAL 526
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+ V S + E N+ +++NG K + A+ V + ++ +GC+P TY S+I+
Sbjct: 527 KMLQVMSERGCEPNLY--TYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLID 584
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+C+I A + F M+ G + +AY+ +++ + ++G + A+ ++ M KGC P
Sbjct: 585 GFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNP 644
Query: 269 NVWIYNSLM 277
+ Y SLM
Sbjct: 645 DAATYFSLM 653
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
R E FFR+ S Y +LI F+ K+ E+ E + D+
Sbjct: 4 RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
++ Y + G +++ L + + C++++G + + A ++ +++I +
Sbjct: 64 TILKAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQK 121
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
C P Y +I C++G A V M ++ V+ Y+S++ +T + +A
Sbjct: 122 DCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEA 181
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+L+ KMK G P+ YN+L++ + L ++ K
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSK 218
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 6/226 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ + D K+G+ E K MKE D Y++LI + ++ A +
Sbjct: 410 FNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL---- 465
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D + ++ G VE+ EV++ M + +I+ G
Sbjct: 466 --GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGD 523
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+K+ + + +GC P TY+ +IN C+ A V M +KG V Y+S++
Sbjct: 524 EALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLI 583
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ K ++ A + M+ GCEP+ YN L+ ++ N+ +
Sbjct: 584 DGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEK 629
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 86/196 (43%), Gaps = 9/196 (4%)
Query: 17 GIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
GI D Y ++E G ++++V L K P+S+H Y ++ L
Sbjct: 466 GISPDKASYSSMLEGLCSTGKVEEAQEVMDLM-----TKQGCPPTSSH-YALIIGGLCDV 519
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
R E LK + M E+G + Y+ LI V+ A + EKG + D+ +
Sbjct: 520 ERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATY 579
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ + + ++ + ++M+++ ++++GF + A++V + ++
Sbjct: 580 TSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLE 639
Query: 194 QGCIPGQVTYASIINA 209
+GC P TY S++ +
Sbjct: 640 KGCNPDAATYFSLMRS 655
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 39/269 (14%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
G LD Y ++ A + G E+ LF E R+ + P+ Y ++ D G+ G
Sbjct: 166 PPGSRLDVRAYTTVLHALSRAGRYERAVELFAEL--RRQGVAPTLV-TYNVVLDVYGRMG 222
Query: 75 RAFE-ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
R++ I+ +M+ G+ D +++I + V A F++ + +G
Sbjct: 223 RSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARG-------H 275
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
V+ Y NA L + F K Y A++V +++
Sbjct: 276 TPCVVTY-----------------NALLQV-----------FGKAGNYTEALRVLKEMEQ 307
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
GC P VTY + Y R G Y +A K M KG Y++++ YG G++ +
Sbjct: 308 DGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDE 367
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
A+ L +MK GC PNV YN ++ M G+
Sbjct: 368 ALALFDQMKKSGCVPNVNTYNFILGMLGK 396
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 125/288 (43%), Gaps = 3/288 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M SAG Y ++ + GD ++ + ++ S Y +L
Sbjct: 477 YNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQS---YSLLLQC 533
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G I +++ + + +L+ + + E+ F+E + +G D
Sbjct: 534 YAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPD 593
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L +F ++ MY + GM K E+ +S+K + L+ +++ ++K W A K+
Sbjct: 594 LVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILN 653
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
QL S P V+Y ++IN +C+ GL +A+++ EM G CVV Y ++V Y
Sbjct: 654 QLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLE 713
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+A ++ M +P Y ++D + +AK + + + +S
Sbjct: 714 MFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEVS 761
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 108/229 (47%), Gaps = 17/229 (7%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA-VKV 187
D+ + ++ G E+ +E+ ++ + + V+++ + + W V +
Sbjct: 172 DVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVAL 231
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++ + G P T +++I A CR GL +A F +++ +G CVV Y++++ ++GK
Sbjct: 232 LDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGK 291
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
G +A+R++ +M+ GC+P+ YN L + RA + K
Sbjct: 292 AGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFT 351
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y TV++AY + D + +++ + +G V + ++G+ K S+
Sbjct: 352 YNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRF 400
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 3/250 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L ++M+ G D+ Y ++ + + G E+ A S+ L P++
Sbjct: 294 NYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSK--GLLPNA-F 350
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + + G G+ E L F MK+ G + + + Y ++ + V E+ E
Sbjct: 351 TYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEM 410
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G + + ++ + + GM + V+E MK+ + +S ++ + + +
Sbjct: 411 SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSR 470
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K+Y ++ S G P TY +++N R G +S A+ + +M+ KGF +YS +
Sbjct: 471 TNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLL 530
Query: 242 VAMYGKTGRI 251
+ Y K G I
Sbjct: 531 LQCYAKGGNI 540
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 142/324 (43%), Gaps = 27/324 (8%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E MKS G+ L Y ++ A+ + G ++ E S P T Y L + L
Sbjct: 443 EGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTS--AGFAPCLT-TYNALLNVL 499
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G M+ KG + Y+ L+ +A + + + KE +
Sbjct: 500 SRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSW 559
Query: 131 EVFLKLVLMYIE---EGMVEKTLEVVESMK-NAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ LV+ + G +EK + V++ N +L I + + ++ ++K Y +
Sbjct: 560 VILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSM----LSMYAKNGMYSKVTE 615
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ + G P +TY S+++ Y + +AEK+ +++ VV+Y++++ +
Sbjct: 616 IFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFC 675
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSL------MDMHGRAK---------NLRQLE- 290
K G I++A R++++M G P V Y++L ++M A+ NL+ +E
Sbjct: 676 KQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMEL 735
Query: 291 KYTTVISAYNMAREFDMCVKFYNE 314
Y V+ +Y A+ F+ F +E
Sbjct: 736 TYRRVVDSYCKAKRFEEARSFLSE 759
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+G ++ + F +K+ G+ D Y SL+ +A +E AE++ + + + D+
Sbjct: 606 KNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVV 665
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVI-----VNGFSKRRAYWAAV 185
+ ++ + ++G++++ ++ M I+D ++ CV+ V G++ + A
Sbjct: 666 SYNTVINGFCKQGLIKEAQRILSEM------IADGMAPCVVTYHTLVGGYASLEMFSEAR 719
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ--KGFDKCVV 236
+V +I P ++TY ++++YC+ + +A E+ + FDK V+
Sbjct: 720 EVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEVSETDPNFDKKVL 772
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 131/276 (47%), Gaps = 7/276 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M + G + Y I+ + G ++ +LF + R+ D P+ Y ++ +
Sbjct: 272 FNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKM--REDDCYPT-VRTYTVIIHA 328
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE--ELFKEAEEKGML 127
L + R E + F +M+E+ +P+V+ + A E K+ E + E EKG++
Sbjct: 329 LFGNDRNLEGMDLFNEMRERSC--EPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLV 386
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + L+ Y EEG +E LE++ M++ ++ ++ GFSKR+ A+ +
Sbjct: 387 PSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTL 446
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++ P VTY S+I+ C+ G + A K+ +++ G YS + K
Sbjct: 447 LSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCK 506
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ R+ +A L +K KG + N +Y +L+D H +A
Sbjct: 507 SKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKA 542
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D+L KS R E F +KEKGI + +Y +LI ++ A L +
Sbjct: 497 YSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMH 556
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ L + + L+ +EG V++ L +VE+M + + +++ + +
Sbjct: 557 SEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFD 616
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +V+ Q++S G P TY + I+ YC G +AE + M + G + Y+ ++
Sbjct: 617 HANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLI 676
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ Y + G DA ++ +M GC+P+ I+N+L+
Sbjct: 677 SAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 128/305 (41%), Gaps = 16/305 (5%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D+ + + + ++ K G E + + + G+ D Y SLI + +V
Sbjct: 208 DMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNS 267
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A ++F KG R+ + ++ E G +++ + + + M+ + + VI++
Sbjct: 268 AYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIH 327
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+ ++ ++ + C P TY +++A C+ ++ ++ EM +KG
Sbjct: 328 ALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVP 387
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----- 288
VV Y++++ Y + GRI A+ ++ M+ C PN YN L+ + K++ +
Sbjct: 388 SVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLL 447
Query: 289 -----------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
L Y ++I A FD K + + NG V D+ + + K
Sbjct: 448 SKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKS 507
Query: 338 SQIEE 342
++EE
Sbjct: 508 KRMEE 512
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 104/259 (40%), Gaps = 17/259 (6%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P+ +++C K + + M E + Y SLI A +
Sbjct: 422 PNERTYNELIC-GFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYK 480
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L +E G++ D + + + +E+ ++ S+K + ++ + +++G
Sbjct: 481 LLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHC 540
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A+ + E++ S+ C+P TY S+I C+ G + + M + G V
Sbjct: 541 KAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVA 600
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------ 290
Y+ ++ + G A R+ +M G +P+V+ Y + + + + N+++ E
Sbjct: 601 TYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARM 660
Query: 291 ----------KYTTVISAY 299
YT +ISAY
Sbjct: 661 IEAGVMPDSLTYTLLISAY 679
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 129/306 (42%), Gaps = 26/306 (8%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M++ I S + I E F G ++ +FL P H + + D L
Sbjct: 137 RMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHG---CPQDLHSFNTILDILC 193
Query: 72 KSGR---AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
KS R A+ L F+ ++ K D Y + + I A E+ KE E+G+
Sbjct: 194 KSKRVEMAYNNL--FKVLRGK-FKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTP 250
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ Y G +++ E MK E+ I +V+GF A KV+
Sbjct: 251 TITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVF 310
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ +G +P TY ++I C+ A +F EM +KG+ + Y+ ++
Sbjct: 311 NEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHA 370
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYN----------------SLMDMHGRAKNLRQLEKY 292
G + AM + +MK GCEPNV YN S+ + G+ +L L+ Y
Sbjct: 371 GNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQG-SLPNLDTY 429
Query: 293 TTVISA 298
+ISA
Sbjct: 430 NVLISA 435
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK-LDLTPSSTHMYKILC 67
++ +MK + +D Y ++ F +G+ ++ +F E L T + M ++LC
Sbjct: 274 FFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLC 333
Query: 68 --DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
DS+ + FE +M +KG + + + Y +I + A E + + G
Sbjct: 334 KKDSVENAVLMFE------EMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDG 387
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA--YWA 183
+++ + + + + G VEK L + E M L D + +I F ++++
Sbjct: 388 CEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGSLPNLDTYNVLISAMFVRKKSEDLVV 447
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
A K+ +++ +G IP + T+ ++N G + A+++ + +Q K
Sbjct: 448 AGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAFAKEI-LRLQSK 492
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 19/142 (13%)
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
V+Y I N +C I KA +V EM ++G + Y+ ++ Y + G++++A +
Sbjct: 218 VSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQ 277
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGG 320
MK + E +V Y TT++ + + E K +NE G
Sbjct: 278 MKEREVEIDVVTY-------------------TTMVHGFGVVGEIKRARKVFNEMVGEGI 318
Query: 321 VIDRAMAGIMVGVFSKLSQIEE 342
+ A M+ V K +E
Sbjct: 319 LPSTATYNAMIQVLCKKDSVEN 340
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 132/270 (48%), Gaps = 7/270 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E MK++G + + + ++E++ + +++ + + L P TH Y + + L
Sbjct: 107 EDMKNSGCEMGTSPFLILIESYAQFELQDEILGV-VHWMIDDFGLKPD-THFYNRMLNLL 164
Query: 71 --GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G + + EI M GI D S + LI + +++ A + ++ G++
Sbjct: 165 VDGNNLKLVEIAH--AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVP 222
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + F ++ YIEEG ++ L + E M + S+ VIV+GF K A+
Sbjct: 223 DEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 189 EQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++ +Q G P Q T+ +++N C+ G A ++ M Q+G+D V Y+S+++ K
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G +++A+ + +M + C PN YN+L+
Sbjct: 343 LGEVKEAVEFLDQMITRDCSPNTVTYNTLI 372
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 136/294 (46%), Gaps = 4/294 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M S G+V D + IM+ + + GD + AL + + + + S+ + ++
Sbjct: 213 EDMPSYGLVPDEKTFTTIMQGYIEEGDLD--GALRIREQMVEFGCSWSNVSV-NVIVHGF 269
Query: 71 GKSGRAFEILKFFRDM-KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K GR + L F ++M + G D + +L+ VK A E+ ++G D
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ + G V++ +E ++ M + + + +++ K A ++
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L S+G +P T+ S+I C + A ++F EM+ KG + Y+ ++ G
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
++ +A+ ++ +M+ GC +V YN+L+D +A +R+ E+ + + ++R
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSR 503
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 116/251 (46%), Gaps = 2/251 (0%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
I+ F K G E A F++ S + P + + L + L K+G ++ M
Sbjct: 265 IVHGFCKEGRVED-ALNFIQEMSNQDGFFPDQ-YTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
++G D Y S+I + EVK A E + + + + L+ +E VE
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ E+ + + + C ++ G R + A++++E++ S+GC P + TY +I
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
++ C G +A + +M+ G + V+ Y++++ + K +IR+A + +M+ G
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVS 502
Query: 268 PNVWIYNSLMD 278
N YN+L+D
Sbjct: 503 RNSVTYNTLID 513
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 132/300 (44%), Gaps = 17/300 (5%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y + L K G E ++F M + + Y +LI + +V+ A EL +
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
KG+L D+ F L+ +E+ E M++ + ++++ +
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A+ + +Q+ GC +TY ++I+ +C+ +AE++F EM+ G + V Y++
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ------------ 288
++ K+ R+ DA +L+ +M +G +P+ + YNSL+ R ++++
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 289 ----LEKYTTVISAYNMAREFDMCVKFYNEFRMNG-GVIDRAMAGIMVGVFSKLSQIEEL 343
+ Y T+IS A ++ K +M G + A ++ G+F K E +
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAI 630
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 3/249 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+ S GI+ D + +++ + LF E S+ + Y +L DSL
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE---PDEFTYNMLIDSLCS 447
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G+ E L + M+ G Y +LI F +++ AEE+F E E G+ R+
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVT 507
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + VE ++++ M ++ F + A + + +
Sbjct: 508 YNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S GC P VTY ++I+ C+ G A K+ +Q KG AY+ ++ + +
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTT 627
Query: 253 DAMRLVAKM 261
+A+ L +M
Sbjct: 628 EAINLFREM 636
>gi|255661012|gb|ACU25675.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 376
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 133/272 (48%), Gaps = 6/272 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+++ + + D+ Y ++ F+++G + L+ E R+ + +S + I+
Sbjct: 13 YKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFELW-EMMGREGSRSVAS---FNIMMRG 68
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L +G+ E++ MK+ G +ED Y L+ F + + + + AE KG + D
Sbjct: 69 LFDNGKVDEVISILELMKKSGFIEDSITYGILVHGFCKNGYINKSLHVLEIAERKGGVLD 128
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ +E ++K + V+ M + + + ++NG + AV+V
Sbjct: 129 AFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKFEDAVRVVR 188
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + C P VTY+++IN C++ + +A + EM ZKG + V+ YS ++
Sbjct: 189 EMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEMLZKGLNPSVITYSLLMKGLCLGH 248
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ A++L ++ KG +P+V ++N L +HG
Sbjct: 249 KVEMALQLXNQVTSKGFKPDVQMHNIL--IHG 278
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 113/264 (42%), Gaps = 3/264 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E MK +G + DS Y ++ F K G K + LE RK + + Y + + L
Sbjct: 83 ELMKKSGFIEDSITYGILVHGFCKNGYINK-SLHVLEIAERKGGVLDA--FAYSAMINGL 139
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + + + M + G + VY +LI ++ + A + +E L
Sbjct: 140 CKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKFEDAVRVVREMGTTNCSPTL 199
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + + ++V+ M LN S +++ G A+++ Q
Sbjct: 200 VTYSTLINGLCKVERFGEAYDLVKEMLZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQ 259
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ S+G P + +I+ C +G A ++++M + +V +++++ + K
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKTQLALLLYLDMNRWNCAPNLVTHNTLMEGFYKDDD 319
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYN 274
IR+A+ + A++ G +P++ YN
Sbjct: 320 IRNALVIWARILRNGLQPDIISYN 343
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/264 (17%), Positives = 103/264 (39%), Gaps = 3/264 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH E + G VLD+ Y ++ K +K ++ K P++ H+Y L
Sbjct: 114 LHVLEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVL--NGMIKSGCKPNA-HVYNAL 170
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L + + + ++ R+M Y++LI + A +L KE ZKG+
Sbjct: 171 INGLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEMLZKGL 230
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ VE L++ + + + ++++G A+
Sbjct: 231 NPSVITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPDVQMHNILIHGLCSVGKTQLALL 290
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+Y + C P VT+ +++ + + A ++ + + G +++Y+ +
Sbjct: 291 LYLDMNRWNCAPNLVTHNTLMEGFYKDDDIRNALVIWARILRNGLQPDIISYNITLKGLC 350
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNV 270
RI DA+ + K P +
Sbjct: 351 SCNRISDAILFLHDAVTKKIVPTI 374
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 164/386 (42%), Gaps = 56/386 (14%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--------------------C 48
Y+ +MK G+V + + ++AF K G ++ LF + C
Sbjct: 292 YFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTC 351
Query: 49 ESRKLD-------------LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDP 95
++ +LD L P+ Y ++ D L K G+ E M+ G+ +
Sbjct: 352 KAGRLDDAIVLLDEMVHQGLVPNVV-TYTVMVDGLCKEGKVAEADNVLSLMERGGVKANE 410
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
+Y +LI + A +L + + KGM D+ ++ L+ ++ V++ ++
Sbjct: 411 LLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHK 470
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
M L + I I++ K AV + +++ G P VTY ++I+ C+ G
Sbjct: 471 MAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGS 530
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
S+A F +M++ G D V AY++++ + K G + AM L+ +M KG + +Y S
Sbjct: 531 ISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTS 590
Query: 276 LMDMHGRAKNLR--------------QLEK--YTTVISAY---NMAREFDMCVKFYNEFR 316
L+D + + NL+ QL+ YT IS + NM +E +E
Sbjct: 591 LIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQE---ARGVLSEMI 647
Query: 317 MNGGVIDRAMAGIMVGVFSKLSQIEE 342
G D+ + ++ + KL +EE
Sbjct: 648 GTGITPDKTVYNCLIRKYQKLGNMEE 673
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 20/293 (6%)
Query: 51 RKLDLTP-SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA 109
R DL P + + I+ D L K G E F MK G D Y SLI +
Sbjct: 190 RLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCG 249
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
+++ E+L E + G D+ + L+ + + G +EK MK + +
Sbjct: 250 DLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFS 309
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V+ F K A+K++ Q+ +G +P + TY S+++ C+ G A + EM +
Sbjct: 310 TFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ 369
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G VV Y+ MV K G++ +A +++ M+ G + N +Y +L +HG N
Sbjct: 370 GLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTL--IHGHFMN---- 423
Query: 290 EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
N R D+ N+ + G +D ++ G ++ K +++E
Sbjct: 424 ---------NNSERALDL----LNQMKNKGMELDVSLYGTLIWGLCKDQKVDE 463
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 113/251 (45%), Gaps = 35/251 (13%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D GK G E+ + +M++ G D Y +LI F+ ++ A F E +
Sbjct: 238 YNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMK 297
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G++ ++ F V + +EG+V++ +++ M+ + ++ +V+G K
Sbjct: 298 RQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLD 357
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM- 241
A+ + ++++ QG +P VTY +++ C+ G ++A+ V M++ G + Y+++
Sbjct: 358 DAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLI 417
Query: 242 ---------------------------VAMYG-------KTGRIRDAMRLVAKMKPKGCE 267
V++YG K ++ +A L+ KM G
Sbjct: 418 HGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLR 477
Query: 268 PNVWIYNSLMD 278
PN IY ++MD
Sbjct: 478 PNTVIYTTIMD 488
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 112/262 (42%), Gaps = 3/262 (1%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
NS+ L +MK+ G+ LD Y ++ K ++ +L + L P++
Sbjct: 424 NNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAG--CGLRPNTV 481
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+Y + D+L K+G+ E + + + G + Y +LI + A F +
Sbjct: 482 -IYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNK 540
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
E G+ +++ + L+ + + G + K + ++ M + +++ + +++G+ K+
Sbjct: 541 MRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQAN 600
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A + ++I G Y I+ +C + + +A V EM G Y+
Sbjct: 601 LQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNC 660
Query: 241 MVAMYGKTGRIRDAMRLVAKMK 262
++ Y K G + +A L +M+
Sbjct: 661 LIRKYQKLGNMEEASSLQNEME 682
>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
Length = 938
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 121/271 (44%), Gaps = 5/271 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+MK G+ D Y ++ + G+ + +F E K ++ P Y IL
Sbjct: 541 NEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEE--MLKANIEPDIV-TYNILASGF 597
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
KSG E+ M ++G+ + Y I F + AE LF EEKG+
Sbjct: 598 CKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIE 657
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-IVNGFSKRRAYWAAVKVYE 189
++ +V Y+ G + + + + N+ D SC ++N + A V +
Sbjct: 658 VMYSSMVCGYLLSGWTDHAYMLFVRVAR-QGNLVDHFSCSKLINDLCRVGNVQGASNVCK 716
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +P ++Y+ +I+ YC+ G KA F +M Q+G V+ Y+ ++ Y K G
Sbjct: 717 IMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAG 776
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
R+++A +L +M G +P+V Y L+D H
Sbjct: 777 RLQEACQLFVQMTNLGIKPDVIAYTVLLDGH 807
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 151/357 (42%), Gaps = 54/357 (15%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + +YE M S GI + +++ F K+G + + A FL+ + L L
Sbjct: 462 NLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKV--- 518
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y I D+ K+G E +K +MK G+ D Y LI + E++ A+++F+E
Sbjct: 519 IYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEM 578
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ + D+ + L + + G+V + ++++ M +
Sbjct: 579 LKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMAD----------------------- 615
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
QG P +TY I +CR G S+AE +F +++KG D V YSSM
Sbjct: 616 ------------QGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSM 663
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR--------QLEK-- 291
V Y +G A L ++ +G + + + L++ R N++ LE
Sbjct: 664 VCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDV 723
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ +IS Y + D ++++ G +D + I++ + K +++E
Sbjct: 724 VPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQE 780
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 122/290 (42%), Gaps = 3/290 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +M G+ D+ Y + G + + E K+ P Y ++
Sbjct: 362 LQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKV---PVEAMAYNMV 418
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K R E K + +G D Y+ LI S+ + + A + ++ G+
Sbjct: 419 MDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGI 478
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + + GM + + K++ L++ I + ++ + K AVK
Sbjct: 479 ETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVK 538
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ G P ++ Y +I+ YC G A++VF EM + + +V Y+ + + +
Sbjct: 539 LLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFC 598
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
K+G + + L+ +M +G EPN Y + R NL + E V+
Sbjct: 599 KSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVV 648
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 22/240 (9%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q + + M +V D Y +++ + + GD +K F + R L +
Sbjct: 707 NVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSV---DVI 763
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL + K+GR E + F M GI D Y L+ + + E L +
Sbjct: 764 VYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLL-------DGHLKETLQQGW 816
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G+ ++ FL + +++ SMK+ ++ V+++G K
Sbjct: 817 E--GIAKERRSFL----------LRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYL 864
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++++++ +G P Y ++IN YC G SKAE + EM KG + + +S +
Sbjct: 865 VEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 924
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 16/218 (7%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M E ++ D Y+ LI + ++ A F + ++G+ D+ V+ L+ Y + G
Sbjct: 718 MLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGR 777
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSK-------------RRAYWAAV---KVYE 189
+++ ++ M N + V+++G K RR++ K+
Sbjct: 778 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 837
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ P Y +I+ C+ +A ++F EM QKG AY++++ Y G
Sbjct: 838 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 897
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
I A L+ +M KG EP+ ++ L R++ ++
Sbjct: 898 EISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQ 935
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 116/291 (39%), Gaps = 21/291 (7%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y++ +S G D Y ++++ + + +LF E S + +S L D
Sbjct: 204 YFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSS----SNASGPEILPLVD 259
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
++ L F D K + V A+ IC F+ I + V ++
Sbjct: 260 HHRRTCATPCSLSFMVDCLIKACITCYDVQAT-ICLFSGICRLGVVPSVWT--------- 309
Query: 129 DLEVFLKLVLMYI-EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
L+L +I E G E L MK +L ++ + + A++V
Sbjct: 310 -----WNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQV 364
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ ++ G P Y+S + C G Y A + E+ ++ +AY+ ++ K
Sbjct: 365 WAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCK 424
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLEKYTTVIS 297
R+ +A +L+ +G P+V+ Y+ L+ + + NL ++ Y ++S
Sbjct: 425 EMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVS 475
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 3/270 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+S + D + ++ K G ++ + LF E + L P+ + +L D K
Sbjct: 203 MESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGL--VPNGV-TFTVLIDGQCK 259
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G+ LK F+ M +G+ D Y +LI + ++K A L E G+ D
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRIT 319
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F L+ + G +E LE+ M + + D V+++G + A ++ ++
Sbjct: 320 FTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDML 379
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G P TY +++ +C+ G K+ EMQ G VV Y++++ K G+++
Sbjct: 380 SAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVK 439
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+A L+ M G PN YN L++ H +
Sbjct: 440 NAKMLLDAMLNVGVAPNDITYNILLEGHSK 469
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 90/197 (45%)
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
F+ ++ + G + + L+ F + V A +F E ++G+ + F L+
Sbjct: 129 FYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCC 188
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ G VE+ + M++ + ++NG K +++++ +G +P V
Sbjct: 189 KAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGV 248
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
T+ +I+ C+ G A K F M +G +V Y++++ K G +++A RLV +M
Sbjct: 249 TFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM 308
Query: 262 KPKGCEPNVWIYNSLMD 278
G P+ + +L+D
Sbjct: 309 SASGLRPDRITFTTLID 325
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 12/219 (5%)
Query: 47 ECESRKLDLTPSSTHM------------YKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
+C+ K+DL + M Y L + L K G E + +M G+ D
Sbjct: 257 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPD 316
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
+ +LI +++ A E+ + E+G+ D F L+ +G V ++
Sbjct: 317 RITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLR 376
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M +A D ++V+ F K+ K+ +++ S G +PG VTY +++N C+ G
Sbjct: 377 DMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQG 436
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
A+ + M G + Y+ ++ + K G D
Sbjct: 437 QVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVD 475
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 114/281 (40%), Gaps = 16/281 (5%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + +L K G F ++ ++G+ + +LI V+
Sbjct: 139 PPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFR 198
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L E + + D+ F L+ +EG +++ + + M L + V+++G
Sbjct: 199 LKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQC 258
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A+K ++ +++QG P VTY ++IN C++G +A ++ EM G +
Sbjct: 259 KGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRI 318
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------MHGRAKNLRQL 289
+++++ K G + A+ + +M +G E + + L+ +H + LR +
Sbjct: 319 TFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDM 378
Query: 290 ---------EKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
YT V+ + M K E + +G V
Sbjct: 379 LSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHV 419
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 125/258 (48%), Gaps = 5/258 (1%)
Query: 22 SGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
S Y I++ + K G + +++ E C S +++P+ Y L + KS + L
Sbjct: 571 SMTYNCIIDGYVKEGAIDSAESVYREMCRS---EISPNVI-TYTSLINGFCKSNKMDLAL 626
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
K DMK KG+ D +VYA+LI F + +++ A + F + E G+ + V+ ++ Y
Sbjct: 627 KMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAY 686
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+E L + + M N ++ I +++G K A+ +Y +++ +G +P
Sbjct: 687 RNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDI 746
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
Y +IN C G A K+ EM V+ Y++++A + K G +++A RL +
Sbjct: 747 FMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDE 806
Query: 261 MKPKGCEPNVWIYNSLMD 278
M KG P+ Y+ L++
Sbjct: 807 MLDKGLVPDDTTYDILVN 824
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 146/354 (41%), Gaps = 20/354 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
S L ++++ G+ + + ++E KIG+ EK L+ + L T +
Sbjct: 344 NSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPT---VFIL 400
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L K E GI Y ++ + +V A L+ +
Sbjct: 401 NFLLKGFRKQNLLENAYLLLDGAVENGI-ASVVTYNIVLLWLCELGKVNEACNLWDKMIG 459
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ L + ++L + ++G ++ EV+ + + L + +++ G K+
Sbjct: 460 KGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEH 519
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +++Q+++ G +P T+ SIIN C++G S+A ++ F + Y+ ++
Sbjct: 520 AFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIID 579
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------------MHG--RAKNLR- 287
Y K G I A + +M PNV Y SL++ MH + K L
Sbjct: 580 GYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLEL 639
Query: 288 QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ Y T+I+ + ++ + KF+++ G + + IM+ + L+ +E
Sbjct: 640 DITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNME 693
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 8/272 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL-- 66
Y+ + G+ LD+ Y +++A + G +A+ +E + +L PS ++
Sbjct: 244 YFGQAAGRGLKLDAASYSIVIQAVCR-GSDLDLASKLVEGD-EELGWVPSEGTYAAVIGA 301
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
C LG G A L+ +M + + + +V SLI + +V A LF E E G+
Sbjct: 302 CVRLGNFGEA---LRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGV 358
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ +F L+ + G VEK E+ MK L + I ++ GF K+ A
Sbjct: 359 TPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYL 418
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + + G I VTY ++ C +G ++A ++ +M KG +V+Y+ M+ +
Sbjct: 419 LLDGAVENG-IASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHC 477
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G + DA ++ + G +PN Y LM+
Sbjct: 478 KKGCMDDAHEVMNGIIESGLKPNAITYTILME 509
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 111/277 (40%), Gaps = 16/277 (5%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+S Y I+ L + G+ E + M KGI Y +I + A E+
Sbjct: 429 ASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEV 488
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E G+ + + L+ ++G E + + M A + +D I+NG K
Sbjct: 489 MNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCK 548
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A I Q IP +TY II+ Y + G AE V+ EM + V+
Sbjct: 549 VGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVIT 608
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLE 290
Y+S++ + K+ ++ A+++ MK KG E ++ +Y +L+ DM K +L
Sbjct: 609 YTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLL 668
Query: 291 K---------YTTVISAYNMAREFDMCVKFYNEFRMN 318
+ Y +ISAY + + + E N
Sbjct: 669 EVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINN 705
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 16/188 (8%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
I++G+ K A +A VY ++ P +TY S+IN +C+ A K+ +M++KG
Sbjct: 577 IIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKG 636
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR--- 287
+ + Y++++A + K + +A + +K+ G PN +YN ++ + N+
Sbjct: 637 LELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAAL 696
Query: 288 -------------QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
L+ YT++I + + Y+E G V D M +++
Sbjct: 697 NLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGL 756
Query: 335 SKLSQIEE 342
Q+E
Sbjct: 757 CNHGQLEN 764
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 5/266 (1%)
Query: 33 YKIGDSEKVAA----LFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKE 88
Y GDS A L +EC R S + ++ L S ++ + E ++ FR M E
Sbjct: 122 YVFGDSAPAAKVLVELLVECAER-YGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLE 180
Query: 89 KGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK 148
G++ L+ + V+ A LF E E+ + D L+ ++ G +
Sbjct: 181 DGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVE 240
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
L + +++ + A K+ E G +P + TYA++I
Sbjct: 241 AERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIG 300
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
A R+G + +A ++ EM V +S++ Y G + A+RL ++ G P
Sbjct: 301 ACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTP 360
Query: 269 NVWIYNSLMDMHGRAKNLRQLEKYTT 294
NV I++ L++ + N+ + + T
Sbjct: 361 NVAIFSVLIEWCSKIGNVEKANELYT 386
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ E ++F +G+ D + Y+ +I + +++ +A +L + EE G +
Sbjct: 234 KGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEG 293
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ ++ + G + L + + M ++ + ++ ++ ++ G+ R +A+++++++
Sbjct: 294 TYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEV 353
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ--------------QKGFDK---- 233
+ G P ++ +I +IG KA +++ M+ KGF K
Sbjct: 354 VEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLL 413
Query: 234 ----------------CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
VV Y+ ++ + G++ +A L KM KG P++ YN ++
Sbjct: 414 ENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMI 473
Query: 278 DMH 280
H
Sbjct: 474 LGH 476
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 77/166 (46%), Gaps = 3/166 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ K+ G+ ++ Y ++ A+ + + E L E + K+ P +Y L D
Sbjct: 663 FFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKI---PCDLKIYTSLID 719
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K G+ L + +M +GI+ D +Y LI + +++ A ++ KE + +
Sbjct: 720 GLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITP 779
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+ ++ L+ + +EG +++ + + M + L D ++VNG
Sbjct: 780 TVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 129/268 (48%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++KM G+V ++ Y +++ + GD E+ A E K + PS + Y +L +
Sbjct: 342 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLER--AFSYRDEMVKKGIMPSVS-TYNLLVHA 398
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L GR E ++M++KGI+ D Y LI ++ K A +L E KG+
Sbjct: 399 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 458
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + +++ ++ E + + ++ + +V+G A + +
Sbjct: 459 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 518
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + P +VT+ +++ CR G +A + EM+++G ++Y+++++ YG+ G
Sbjct: 519 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRG 578
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
I+DA R+ +M G P + YN+L+
Sbjct: 579 DIKDAFRVRDEMLSIGFNPTLLTYNALI 606
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 131/278 (47%), Gaps = 3/278 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M+ GI DS Y ++ K G E+ + LF + ++ L P++ Y L D
Sbjct: 308 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV--EIGLVPNAV-TYNTLIDGY 364
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G + +M +KGI+ S Y L+ + + A+++ KE +KG++ D
Sbjct: 365 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 424
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ Y G +K ++ M + + + ++ S+R A ++E+
Sbjct: 425 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 484
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ QG P + + ++++ +C G +A + EM +K V +++++ + G+
Sbjct: 485 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 544
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ +A L+ +MK +G +P+ YN+L+ +GR +++
Sbjct: 545 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKD 582
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 122/278 (43%), Gaps = 3/278 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK GIV ++ F K+ E L+ E ++ S+ + + I+ + L K
Sbjct: 205 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRIS---STVYTFNIMVNVLCK 261
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G+ + +F M+ G + Y ++I ++S ++ A + KG+ D
Sbjct: 262 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 321
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ +EG +E+ + + M L + +++G+ + A ++++
Sbjct: 322 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 381
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G +P TY +++A G +A+ + EM++KG + Y+ ++ Y + G +
Sbjct: 382 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 441
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
A L +M KG EP Y SL+ + R +++ +
Sbjct: 442 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 479
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 3/242 (1%)
Query: 44 LFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLIC 103
LF E + L+ S+ ++ +L + RA E K F MKEKGI+ ++
Sbjct: 163 LFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLS 222
Query: 104 SFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI 163
F + +++A L+ E + + F +V + +EG ++K E + M+
Sbjct: 223 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKP 282
Query: 164 SDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
+ I++G+S R A ++ + + +G P TY S+I+ C+ G +A +F
Sbjct: 283 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 342
Query: 224 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MH 280
+M + G V Y++++ Y G + A +M KG P+V YN L+ M
Sbjct: 343 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME 402
Query: 281 GR 282
GR
Sbjct: 403 GR 404
>gi|357480587|ref|XP_003610579.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511634|gb|AES92776.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 706
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 18/281 (6%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+++F M G D Y+ +I S+ ++ +A L+ A + + F L+ M
Sbjct: 236 VEWFEKMPLFGCEPDDVTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPATFSTLIKM 295
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
Y G + L V E MK + + + +++ + + W A +Y+++I+ +P
Sbjct: 296 YGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMINNDILPN 355
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+ TYAS+++AY R A V+ EM++K D Y+S++AM G A +
Sbjct: 356 RATYASLLHAYGRARFCEDALVVYREMREKEMDLNTHLYNSLLAMCADVGYTDLAFEIFE 415
Query: 260 KMKPKG-CEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMA 302
MK C P+ W ++SL+ ++ + + + E+ T+++ Y A
Sbjct: 416 DMKSSDTCSPDSWTFSSLITIYSCSGRVSEAERMMNEMIESGFEPTIFVLTSLVQCYGKA 475
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ D VK +N+ G D G ++ V ++ + EEL
Sbjct: 476 KRTDDVVKTFNQLLDMGIEPDDRFCGCLLNVMTQTPK-EEL 515
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 118/264 (44%), Gaps = 4/264 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ ++EKM G D Y +++++ K GD + L+ + K + P++ + L
Sbjct: 236 VEWFEKMPLFGCEPDDVTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPAT---FSTL 292
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
G +G L + +MK G+ + VY +L+ + A ++KE +
Sbjct: 293 IKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMINNDI 352
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L + + L+ Y E L V M+ E++++ + ++ + A +
Sbjct: 353 LPNRATYASLLHAYGRARFCEDALVVYREMREKEMDLNTHLYNSLLAMCADVGYTDLAFE 412
Query: 187 VYEQL-ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++E + S C P T++S+I Y G S+AE++ EM + GF+ + +S+V Y
Sbjct: 413 IFEDMKSSDTCSPDSWTFSSLITIYSCSGRVSEAERMMNEMIESGFEPTIFVLTSLVQCY 472
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPN 269
GK R D ++ ++ G EP+
Sbjct: 473 GKAKRTDDVVKTFNQLLDMGIEPD 496
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 88/199 (44%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
K F +M ++G+ D ++++I S A E F++ G D + ++ Y
Sbjct: 202 KVFGEMLQRGVKPDNVTFSTIISCARSCYLPDKAVEWFEKMPLFGCEPDDVTYSVMIDSY 261
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G ++ L + + + + I ++ + Y + VYE++ + G P
Sbjct: 262 GKAGDIDMALNLYDRARTEKWRIEPATFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNL 321
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
V Y ++++A R +A ++ EM Y+S++ YG+ DA+ + +
Sbjct: 322 VVYNTLLDAMGRAKRPWQARTIYKEMINNDILPNRATYASLLHAYGRARFCEDALVVYRE 381
Query: 261 MKPKGCEPNVWIYNSLMDM 279
M+ K + N +YNSL+ M
Sbjct: 382 MREKEMDLNTHLYNSLLAM 400
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 65/236 (27%)
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
V + VL Y++ + T EV+ + N L + F K + A KV+ ++
Sbjct: 162 VVVPFVLQYVQRKSI-PTREVI--LYNVTLKV-----------FRKCKDLDGAEKVFGEM 207
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ +G P VT+++II+ L KA + F +M G + V YS M+ YGK G I
Sbjct: 208 LQRGVKPDNVTFSTIISCARSCYLPDKAVEWFEKMPLFGCEPDDVTYSVMIDSYGKAGDI 267
Query: 252 RDAMRLVAK-----------------------------------MKPKGCEPNVWIYNSL 276
A+ L + MK G +PN+ +YN+L
Sbjct: 268 DMALNLYDRARTEKWRIEPATFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTL 327
Query: 277 MDMHGRAKN----------------LRQLEKYTTVISAYNMAREFDMCVKFYNEFR 316
+D GRAK L Y +++ AY AR + + Y E R
Sbjct: 328 LDAMGRAKRPWQARTIYKEMINNDILPNRATYASLLHAYGRARFCEDALVVYREMR 383
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%)
Query: 105 FASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS 164
F ++ AE++F E ++G+ D F ++ + +K +E E M
Sbjct: 191 FRKCKDLDGAEKVFGEMLQRGVKPDNVTFSTIISCARSCYLPDKAVEWFEKMPLFGCEPD 250
Query: 165 DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI 224
D V+++ + K A+ +Y++ ++ T++++I Y G Y V+
Sbjct: 251 DVTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPATFSTLIKMYGVAGNYDGCLNVYE 310
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
EM+ G +V Y++++ G+ R A + +M PN Y SL+ +GRA+
Sbjct: 311 EMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMINNDILPNRATYASLLHAYGRAR 370
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 39/271 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ D Y ++ K+GD+ V+AL L + ++ + +Y + D L
Sbjct: 206 DRMVENGLQPDQITYGTFVDGMCKMGDT--VSALNLLRKMEEISHIKPNVVIYSAIIDGL 263
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR + F +M++KGI + Y +I F A+ L +E
Sbjct: 264 CKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE---------- 313
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
M+E+ + NA ++N F K ++ A ++Y++
Sbjct: 314 --------------MLERKISPNVVTYNA-----------LINAFVKEGKFFEAAELYDE 348
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ +G IP +TY S+I+ +C+ AE +F M KG V +++++ Y R
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 408
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
I D M L+ +M +G N YN+L +HG
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTL--IHG 437
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 149/360 (41%), Gaps = 30/360 (8%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ + +M+ GI + Y ++ F G L E RK+ +P+ Y L
Sbjct: 274 NLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKI--SPNVV-TYNALI 330
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++ K G+ FE + + +M +GI+ + Y S+I F + AE++F KG
Sbjct: 331 NAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS 390
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ F L+ Y ++ +E++ M L + +++GF AA+ +
Sbjct: 391 PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL 450
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ-----------KGFDKCVV 236
+Q+IS G P VT ++++ C G A ++F MQ+ G + V+
Sbjct: 451 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVL 510
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
Y+ ++ G+ +A L +M +G P+ Y+S++D + L + +
Sbjct: 511 TYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSM 570
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
+ T+I+ Y A D ++ + E G V D + ++ F K+ I
Sbjct: 571 GSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNI 630
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L + L + GR E + M E G+ D Y + + + + A L ++ E
Sbjct: 185 FTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKME 244
Query: 123 EKGMLR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E ++ ++ ++ ++ ++G + + M++ + + ++ GF +
Sbjct: 245 EISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRW 304
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AA ++ ++++ + P VTY ++INA+ + G + +A +++ EM +G + Y+SM
Sbjct: 305 SAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSM 364
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ + K R+ A + M KGC P+V+ + +L+D + AK +
Sbjct: 365 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 409
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/314 (16%), Positives = 129/314 (41%), Gaps = 49/314 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M GI+ ++ Y +++ F K + +F ++ + L D
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG---CSPDVFTFTTLIDG 402
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ R + ++ +M +G++ + Y +LI F + ++ A +L ++ G+ D
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI----------SDCIS-CVIVNGFSKR 178
+ L+ + G ++ LE+ ++M+ +++++ D ++ +++ G
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 522
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYAS--------------------------------- 205
+ A ++YE++ +G +P +TY+S
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582
Query: 206 --IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+IN YC+ G ++F EM ++G + Y +++ + K G I A+ + +M
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642
Query: 264 KGCEPNVWIYNSLM 277
G P+ +++
Sbjct: 643 SGVYPDTITIRNML 656
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 13/225 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH-- 61
+ L ++M S+G+ D +++ G + +F + K+DL S
Sbjct: 445 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG 504
Query: 62 ------MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
Y IL L G+ E + + +M +GI+ D Y+S+I + + A
Sbjct: 505 VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
++F K ++ F L+ Y + G V+ LE+ M + I ++ GF
Sbjct: 565 QMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 624
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
K A+ +++++IS G P +T +++ G +SK E
Sbjct: 625 RKVGNINGALDIFQEMISSGVYPDTITIRNMLT-----GFWSKEE 664
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M GIV D+ Y +++ K ++ +F+ S+ +P+ + L +
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSF--SPNVV-TFNTLING 588
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+GR + L+ F +M +GI+ D +Y +LI F + + A ++F+E G+ D
Sbjct: 589 YCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 648
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
++ + + +E+ + ++E ++ +L
Sbjct: 649 TITIRNMLTGFWSKEELERAVAMLEDLQRYQL 680
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 92/222 (41%), Gaps = 11/222 (4%)
Query: 78 EILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
+ + F DM L PSV + L+ + + + L+++ E K + D+ F
Sbjct: 64 DAIDLFSDMLRSRPL--PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
L+ + + L + L+ +++G A+ ++ Q+
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C P +T+ +++N CR G +A + M + G + Y + V K G A+
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 256 RLVAKMKP-KGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
L+ KM+ +PNV IY++++D G K+ R + + I
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIID--GLCKDGRHSDSHNLFI 277
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 39/271 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G+ D Y ++ K+GD+ V+AL L + ++ + +Y + D L
Sbjct: 206 DRMVENGLQPDQITYGTFVDGMCKMGDT--VSALNLLRKMEEISHIKPNVVIYSAIIDGL 263
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR + F +M++KGI + Y +I F A+ L +E
Sbjct: 264 CKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE---------- 313
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
M+E+ + NA ++N F K ++ A ++Y++
Sbjct: 314 --------------MLERKISPNVVTYNA-----------LINAFVKEGKFFEAAELYDE 348
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ +G IP +TY S+I+ +C+ AE +F M KG V +++++ Y R
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 408
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
I D M L+ +M +G N YN+L +HG
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTL--IHG 437
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 149/360 (41%), Gaps = 30/360 (8%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ + +M+ GI + Y ++ F G L E RK+ +P+ Y L
Sbjct: 274 NLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKI--SPNVV-TYNALI 330
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++ K G+ FE + + +M +GI+ + Y S+I F + AE++F KG
Sbjct: 331 NAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS 390
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ F L+ Y ++ +E++ M L + +++GF AA+ +
Sbjct: 391 PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL 450
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ-----------KGFDKCVV 236
+Q+IS G P VT ++++ C G A ++F MQ+ G + V+
Sbjct: 451 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVL 510
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
Y+ ++ G+ +A L +M +G P+ Y+S++D + L + +
Sbjct: 511 TYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSM 570
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
+ T+I+ Y A D ++ + E G V D + ++ F K+ I
Sbjct: 571 GSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNI 630
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L + L + GR E + M E G+ D Y + + + + A L ++ E
Sbjct: 185 FTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKME 244
Query: 123 EKGMLR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E ++ ++ ++ ++ ++G + + M++ + + ++ GF +
Sbjct: 245 EISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRW 304
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AA ++ ++++ + P VTY ++INA+ + G + +A +++ EM +G + Y+SM
Sbjct: 305 SAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSM 364
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ + K R+ A + M KGC P+V+ + +L+D + AK +
Sbjct: 365 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 409
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/314 (16%), Positives = 129/314 (41%), Gaps = 49/314 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M GI+ ++ Y +++ F K + +F ++ + L D
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG---CSPDVFTFTTLIDG 402
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ R + ++ +M +G++ + Y +LI F + ++ A +L ++ G+ D
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI----------SDCIS-CVIVNGFSKR 178
+ L+ + G ++ LE+ ++M+ +++++ D ++ +++ G
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 522
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYAS--------------------------------- 205
+ A ++YE++ +G +P +TY+S
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582
Query: 206 --IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+IN YC+ G ++F EM ++G + Y +++ + K G I A+ + +M
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642
Query: 264 KGCEPNVWIYNSLM 277
G P+ +++
Sbjct: 643 SGVYPDTITIRNML 656
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 13/225 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH-- 61
+ L ++M S+G+ D +++ G + +F + K+DL S
Sbjct: 445 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG 504
Query: 62 ------MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
Y IL L G+ E + + +M +GI+ D Y+S+I + + A
Sbjct: 505 VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
++F K ++ F L+ Y + G V+ LE+ M + I ++ GF
Sbjct: 565 QMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 624
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
K A+ +++++IS G P +T +++ G +SK E
Sbjct: 625 RKVGNINGALDIFQEMISSGVYPDTITIRNMLT-----GFWSKEE 664
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M GIV D+ Y +++ K ++ +F+ S+ +P+ + L +
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS--FSPNVV-TFNTLING 588
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+GR + L+ F +M +GI+ D +Y +LI F + + A ++F+E G+ D
Sbjct: 589 YCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 648
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMK 157
++ + + +E+ + ++E ++
Sbjct: 649 TITIRNMLTGFWSKEELERAVAMLEDLQ 676
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 92/222 (41%), Gaps = 11/222 (4%)
Query: 78 EILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
+ + F DM L PSV + L+ + + + L+++ E K + D+ F
Sbjct: 64 DAIDLFSDMLRSRPL--PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
L+ + + L + L+ +++G A+ ++ Q+
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C P +T+ +++N CR G +A + M + G + Y + V K G A+
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 256 RLVAKMKP-KGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
L+ KM+ +PNV IY++++D G K+ R + + I
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIID--GLCKDGRHSDSHNLFI 277
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 158/378 (41%), Gaps = 47/378 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M +G+ D Y ++EAF K+G+ ++ + + + ++ S ++ + +
Sbjct: 510 FEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQ---PSNRAFRPIIEG 566
Query: 70 LGKSG---RAFEILKFFR--------------------------------DMKEKGILED 94
+G RA +IL R M GI +
Sbjct: 567 FAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPN 626
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y ++ +A+ ++ A E F + +E G+ D+ ++ L+ + G ++ L V
Sbjct: 627 EHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTR 686
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M + ++ + + ++++G+++R W A + +Q+ G P TY S INA C+ G
Sbjct: 687 EMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAG 746
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A+ V EM G + Y++++ + + A++ +MK G +P+ Y+
Sbjct: 747 DMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYH 806
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV---------KFYNEFRMNGGVIDRA 325
L+ + + YT ++S E D+ V ++ ++ M GG + A
Sbjct: 807 CLVTSLLSRATVMEGSTYTGILSVCREMFENDLTVDMRTAVHWSRWLHKIEMTGGALTEA 866
Query: 326 MAGIMVGVFSKLSQIEEL 343
+ I ++ + E+
Sbjct: 867 LQRIFPPDWNSFEVLGEV 884
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 148/328 (45%), Gaps = 41/328 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M++ GI ++ + ++ A+ D + E ++ ++LT + Y IL
Sbjct: 300 FENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVT---YSILISG 356
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK F++ K + +Y+++I + + AEEL E EE G+
Sbjct: 357 FGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAP 416
Query: 130 LEVF----------------------LK-------------LVLMYIEEGMVEKTLEVVE 154
++ + LK L+ +Y++ G V K + + +
Sbjct: 417 IDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISK 476
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M+++ + ++ ++++GF + A +++E+++ G P + Y +I A+C++G
Sbjct: 477 EMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMG 536
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A ++ +MQ++ A+ ++ + G ++ A+ ++ M+ GC P V YN
Sbjct: 537 NMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYN 596
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+L +HG + Q+E+ +V++ ++A
Sbjct: 597 AL--IHGLIRK-NQVERAVSVLNKMSIA 621
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 130/293 (44%), Gaps = 3/293 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M+ GI Y +M + I D +K +F ++ TPS Y L +
Sbjct: 406 HEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERL--KECCFTPSIIS-YGCLINLY 462
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G+ + + ++M+ GI + Y+ LI F + + A +F+E + G+ D
Sbjct: 463 VKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDR 522
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
++ L+ + + G +++ + ++E M+ + S+ I+ GF+ A+ + +
Sbjct: 523 AIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDL 582
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ GC P +TY ++I+ R +A V +M G Y+ ++ Y TG
Sbjct: 583 MRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGD 642
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
I A K+K G + +V+IY +L+ ++ ++ T +S+ +AR
Sbjct: 643 IAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIAR 695
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 140/331 (42%), Gaps = 19/331 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+S+GI ++ Y ++ F + D +F E K L P +Y +L ++
Sbjct: 476 KEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEM--LKSGLQPDRA-IYNLLIEAF 532
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G ++ M+++ + + +I FA ++K A ++ G +
Sbjct: 533 CKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTV 592
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ I + VE+ + V+ M A + ++ +I+ G++ A + + +
Sbjct: 593 MTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTK 652
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G Y +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 653 IKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGD 712
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTT 294
+ +A L+ +MK G PN+ Y S ++ +A ++++ L+ YTT
Sbjct: 713 VWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTT 772
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
+I + A D +K + E ++ G D A
Sbjct: 773 LIKGWARASLPDRALKCFEEMKLAGLKPDEA 803
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F +++ Y + G E+M+ + + + +V+ ++ R A+ E++
Sbjct: 280 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMK 339
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
++G VTY+ +I+ + +I A+ +F E + D + YS+++ + ++G +
Sbjct: 340 AEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMD 399
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
A LV +M+ G + + Y+S+ MHG
Sbjct: 400 RAEELVHEMEEDGIDAPIDAYHSM--MHG 426
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 57/117 (48%)
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
++KR A +E + ++G P + S+++AY A EM+ +G +
Sbjct: 287 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELT 346
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+V YS +++ +GK + A L + K + N IY++++ H ++ N+ + E+
Sbjct: 347 IVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEE 403
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 129/280 (46%), Gaps = 1/280 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D+L K GR E F +K KG+ + +Y +LI + + ++ VA L +
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
L + + L+ +E +++ +V M + + +++ K A+
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+KV+ ++S G P TY + ++AY G+ + + V +M ++G +V Y+ ++
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
Y + G A + M GC+P+++I + L+ +++ + S N
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN-T 715
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
E+++ +K + + +G ID ++ G ++ F + ++EE
Sbjct: 716 LEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEE 755
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 35/266 (13%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ Y +L +L SGR E L F +MKEKG + Y LI ++ A ++
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E EKG++ + + L+ Y +EGM++ E+++ M++ + ++ G K
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416
Query: 178 RRAYWAAVKV---------------YEQLISQGC--------------------IPGQVT 202
+R A+ + Y LI C +P Q T
Sbjct: 417 KRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWT 476
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y+ I+ C+ G +A +F ++ KG V Y++++ Y K G+I A L+ +M
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQ 288
C PN + YN L++ + K +++
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKE 562
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 137/335 (40%), Gaps = 19/335 (5%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
CY I+ + K +++ ++LE + ++ + + + + + K G E +
Sbjct: 161 CYNTILMSLSKFLLIDEMKTVYLELLNNQIS---PNIYTFNAMVNGYCKIGNVVEAELYA 217
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+ + G+ D Y SLI V A E+F +KG R+ + L+ E
Sbjct: 218 SKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEA 277
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G + + L++ M + V++ S A+ ++ ++ +GC P TY
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTY 337
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+I+ C+ +A K+ EM +KG VV Y++++ Y K G I DA ++ M+
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397
Query: 264 KGCEPNVWIYNSLM-------DMHGRAKNL-RQLEK--------YTTVISAYNMAREFDM 307
C PN YN L+ +H L + LE+ Y ++I + +
Sbjct: 398 NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ + NG V D+ + + K ++EE
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 121/305 (39%), Gaps = 38/305 (12%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y K+ AG+ D+ Y ++ + + +FL + S Y L
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS---YTNLIH 272
Query: 69 SLGKSGRAFEILKFFRD-----------------------------------MKEKGILE 93
L ++GR E LK F D MKEKG
Sbjct: 273 GLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEP 332
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ Y LI ++ A ++ E EKG++ + + L+ Y +EGM++ E++
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL 392
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ M++ + ++ G K+R A+ + +++ + P +TY S+I+ C++
Sbjct: 393 DLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKV 452
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
A ++ M + G YS + K GR+ +A L +K KG + N IY
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIY 512
Query: 274 NSLMD 278
+L+D
Sbjct: 513 TALID 517
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 94/220 (42%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+T Y L L K + + + M E+ + Y SLI + +++ A L
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E G++ D + + +EG VE+ + +S+K + ++ I +++G+ K
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCK 521
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A + E++++ C+P TY +I C+ +A + +M G VV
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y+ ++ K G A+++ M G +P+V Y + +
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFL 621
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 3/203 (1%)
Query: 79 ILKFFRDMKEKGILE-DPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
+L+ FR M G + P++ Y +++ S + + + ++ E + ++ F
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
+V Y + G V + + A L+ ++ G + + A +V+ + +G
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C +V+Y ++I+ C G ++A K+F +M + V Y+ ++ +GR +A+
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319
Query: 256 RLVAKMKPKGCEPNVWIYNSLMD 278
L +MK KGCEPNV Y L+D
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLID 342
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 127/297 (42%), Gaps = 35/297 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYK 64
L + M S G D Y + A++ G E+V + + + DL Y
Sbjct: 599 LKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLV-----TYT 653
Query: 65 ILCDS---LGKSGRAFEILKFFRDMKEKGILEDPSVYASLIC------------------ 103
+L D LG + RAF+ LK D K PS+Y I
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCK-----PSLYIVSILIKNLSHENRMKETRSEIG 708
Query: 104 --SFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
S ++ E ++A +LF++ E G D+ ++ L+ + ++ +E+ +V MK +
Sbjct: 709 IDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGM 768
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
+ S+ I +++ K Y AV++ + ++ G +P +Y ++ G KA+
Sbjct: 769 SPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKA 828
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
VF + G++ VA+ ++ K + + L+ M+ KGC+PN Y+ L++
Sbjct: 829 VFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIE 885
>gi|255660960|gb|ACU25649.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 376
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 133/272 (48%), Gaps = 6/272 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+K+ + + D+ Y ++ ++++ + L+ E + + + SS + I+
Sbjct: 13 YKKIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELW-EMMGSEGNRSVSS---FNIMMRG 68
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L +G+ E++ + MKE G +ED Y L+ F + + + + AE+KG + D
Sbjct: 69 LFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLD 128
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ +E +++ L V+ M + + + ++NG + A++V+
Sbjct: 129 AFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFR 188
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + C P +TY ++IN C+ ++ +A + E+ KG D V+ YS ++
Sbjct: 189 EMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDH 248
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
R+ A++L ++ KG +P+V ++N L +HG
Sbjct: 249 RVERALQLWNQVTSKGFKPDVQMHNIL--IHG 278
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 103/249 (41%), Gaps = 3/249 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH E + G VLD+ Y ++ K + ++ AL + + K P+ H+Y L
Sbjct: 114 LHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDR--ALSVLNDMIKSGCKPN-VHVYNTL 170
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L + + + ++ FR+M Y +LI A L KE +KG+
Sbjct: 171 INGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGL 230
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + VE+ L++ + + + ++++G A+
Sbjct: 231 DPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALS 290
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+Y + C P V++ +++ + + G A ++ + + G + +++Y+ +
Sbjct: 291 LYFDMNHWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLC 350
Query: 247 KTGRIRDAM 255
RI DA+
Sbjct: 351 SCNRISDAI 359
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 4/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ KM+ I D Y I++ K + LF + E++ + Y L
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI---KPDVFTYNPL 291
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE-AEEKG 125
L GR + + DM EK I D + +LI +F ++ AE+L+ E + K
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
D+ + L+ + + VE+ +EV M L + +++GF + R A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
V++Q++S G P +TY +++ C G A VF MQ++ +V Y++M+
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++ D L + KG +PNV Y ++M
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 1/217 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + L K G L M++ I D +Y ++I + A +LF + E
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + L+ G ++ M +N +++ F K
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 183 AAVKVYEQLI-SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K+Y++++ S+ C P V Y ++I +C+ + +VF EM Q+G V Y+++
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ + + +A + +M G P++ YN L+D
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L K R E ++ FR+M ++G++ + Y +LI F + A+ +FK+
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ + L+ G VE L V E M+ ++ + ++ K
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ L +G P VTY ++++ +CR GL +A+ +F+EM++ G Y++++
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ G + L+ +M+ G
Sbjct: 539 RARLRDGDEAASAELIKEMRSCG 561
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 1/221 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
PS K+L ++ K + ++ M+ GI + Y+ I F +++ +A
Sbjct: 73 PSIVEFSKLL-SAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALA 131
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ + + G + L+ + + + + +V+ M +V+G
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ AV + E+++ +GC P VTY ++IN C+ G A + +M++ + VV
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y++++ K + DA L KM+ KG +P+V+ YN L+
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 95 PSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
PS+ ++ L+ + A + + + L ++ + G+ +L + + + + L +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ M S ++NGF AV + +Q++ G P VT+ ++++ +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
S+A + M KG +V Y +++ K G A+ L+ KM+ E +V I
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 273 YNSLMD 278
YN+++D
Sbjct: 253 YNTIID 258
>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13800-like [Brachypodium distachyon]
Length = 821
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 134/311 (43%), Gaps = 46/311 (14%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH------- 61
Y++K + +G+ +D Y M+A+ K+G+ ++ L E + + L+P H
Sbjct: 387 YFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMT--VGLSPDRIHYTCLIKG 444
Query: 62 ---------------------------MYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
Y IL L K G E+ M+++G+ +
Sbjct: 445 YCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPN 504
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKT----L 150
Y +I F + AE LF EEKG+ ++ +V Y+ +G + L
Sbjct: 505 SLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFL 564
Query: 151 EVVESMKNAE-LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
V + K + + S IS + +G S+ A V ++ + +P ++Y+ +I+A
Sbjct: 565 RVAKQGKLVDRFSCSKLISDLCRDGNSQ-----GASTVCSTMLEKNDVPDLISYSKLISA 619
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
YC+ G A F +M Q+G V+ Y+ ++ Y K G +++A L A+M G +P+
Sbjct: 620 YCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPD 679
Query: 270 VWIYNSLMDMH 280
+ Y L+D H
Sbjct: 680 IIAYTVLLDGH 690
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 105/234 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ ++ D L K R E+ K + +G+ D Y+ LI S+ + + + ++
Sbjct: 298 FNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMV 357
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ + + L+ + + GM + E + +++ L+I + + ++ + K
Sbjct: 358 SHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMD 417
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AVK+ ++++ G P ++ Y +I YC G A + F EM + VV Y+ +
Sbjct: 418 EAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILA 477
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
+ K G + + L+ M+ +G +PN Y ++D R NL + E ++
Sbjct: 478 SGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIV 531
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 3/249 (1%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G+ D Y ++ ++ K+G+ KV + S L+ ++ H+ L K G A
Sbjct: 325 GLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLE---ANCHIMSYLLQCFTKLGMA 381
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
++ ++F+ ++ G+ D +Y + ++ + + A +L E G+ D + L
Sbjct: 382 SQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCL 441
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ Y +G ++ + E M A + ++ +G SKR + + +G
Sbjct: 442 IKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGL 501
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P +TY +I+ +CR S+AE +F +++KG D V YSSMV Y G +A
Sbjct: 502 QPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYV 561
Query: 257 LVAKMKPKG 265
L ++ +G
Sbjct: 562 LFLRVAKQG 570
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 16/176 (9%)
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
+F DM ++G+ D VY L+ + I ++ A ELF + G+ D+ + L+ ++
Sbjct: 632 WFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDGHL 691
Query: 142 EEGMVE----------------KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+E + K ++ SMK E+ V+++G K A
Sbjct: 692 KEDLQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQAR 751
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
++++++ +G P Y ++IN YC G +KAE +F EM KG V+ +S +
Sbjct: 752 GLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVL 807
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 19/223 (8%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M EK + D Y+ LI ++ +++ A F + ++G+ D+ V+ L+ Y + G+
Sbjct: 601 MLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGL 660
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKR--RAYWAAV--------------KVYE 189
+++ E+ M + + V+++G K + W + ++
Sbjct: 661 MQEACELFAQMTSLGIKPDIIAYTVLLDGHLKEDLQRRWQGISRDKRSLLLRAKQNRLLS 720
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ P Y +I+ C+ +A +F EM QKG AY++++ Y G
Sbjct: 721 SMKEMEIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQG 780
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+ A L +M KG +P+V ++ L + R RQ + Y
Sbjct: 781 EVAKAEDLFQEMVDKGIKPDVLTFSVL---NRRVLRNRQDQSY 820
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 137/355 (38%), Gaps = 44/355 (12%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y++ +S G D Y +I+ G + +LF E ++P+
Sbjct: 87 YFKDAESVGFRHDFSTYAEIVHILSHSGQGRMLFSLFCEI------VSPT---------- 130
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYAS--LICSFASIAEVKVAEELFKEAEEKGM 126
SG EI+ +K P ++A+ LI + + + + LF E G+
Sbjct: 131 ----SGGGPEIVPLMDQLKRTCTTSYPLLFATNCLITACTTCCDARDTIGLFGELCRLGV 186
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ E E L + MK L + +I + + A K
Sbjct: 187 VPPVWTCNILLKFAAESCDSEIVLSAYDEMKFFRLTLDAHSLRIITRSLFQEKKADKAFK 246
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+ ++I G P ++S I C G A + E+ ++ +A++ ++
Sbjct: 247 VWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLC 306
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-LRQLEKYTTVISA------- 298
K R+ + +L+ +G P+++ Y+ L+ + + N L+ L+ Y ++S
Sbjct: 307 KEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCH 366
Query: 299 -----------YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
MA + +++ +FR +G ID + I + + KL ++E
Sbjct: 367 IMSYLLQCFTKLGMASQV---TEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDE 418
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 125/327 (38%), Gaps = 56/327 (17%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q+ +E+M A + D Y + K G +V L E R L P+S Y
Sbjct: 452 QNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQ--PNSL-TY 508
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ D + E F ++EKGI +Y+S++C + A LF +
Sbjct: 509 GVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAK 568
Query: 124 KGMLRDLEVFLKLVLMYIEEG-----------MVEKTLEVVE---------------SMK 157
+G L D KL+ +G M+EK +V + M+
Sbjct: 569 QGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKN-DVPDLISYSKLISAYCQTGDMR 627
Query: 158 NAELNISDCIS----------CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
NA L D + V++NG+ K A +++ Q+ S G P + Y ++
Sbjct: 628 NARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLL 687
Query: 208 NAYCR----------------IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ + + + L +K ++ M++ + V Y+ ++ K+ +
Sbjct: 688 DGHLKEDLQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYL 747
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A L +M KG P+ + Y +L++
Sbjct: 748 EQARGLFDEMLQKGLTPDHYAYTALIN 774
>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
Length = 864
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 19/257 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K E L + +M G L D Y+S+I + A+ L +E +
Sbjct: 159 YTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMD 218
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G+ + V+ LV + G ++ M ++ + +++G K
Sbjct: 219 KMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSD 278
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ L CIP +TY ++I+ YC++G AE + +M++K VV YSS++
Sbjct: 279 EAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSII 338
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
Y K G + A+R++ KM + PN +IY +L+D H +A
Sbjct: 339 NGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAG------------------ 380
Query: 303 REFDMCVKFYNEFRMNG 319
+ D V YNE ++NG
Sbjct: 381 -KQDAAVDLYNEMKLNG 396
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 161/385 (41%), Gaps = 53/385 (13%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L YE+M S G + D Y I+ K G + AL E + K+ + P+ +Y IL
Sbjct: 176 LSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMD--KMGVNPNHV-VYAIL 232
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILED-------------------------------- 94
DSL K+G A+E + M G+ D
Sbjct: 233 VDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNC 292
Query: 95 -PS--VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
P+ Y ++I + + ++ AE L ++ E+K ++ ++ + ++ Y ++GM++ +
Sbjct: 293 IPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVR 352
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+++ M + + + I +++G K AAV +Y ++ G + IN
Sbjct: 353 IMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLK 412
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
R +AE + M KG V Y+S++ + KTGR A + KM G + +V
Sbjct: 413 RGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVV 472
Query: 272 IYNSLM---------DMHGRAKNLRQL------EKYTTVISAYNMAREFDMCVKFYNEFR 316
YN L+ D +R+L Y T+I+AY + + +K +NE +
Sbjct: 473 AYNVLINGLLRLGKYDAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMK 532
Query: 317 MNGGVIDRAMAGIMVGVFSKLSQIE 341
+ + + I+VG SK + E
Sbjct: 533 GHSVMPNSITCNILVGGLSKAGETE 557
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 124/279 (44%), Gaps = 3/279 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y ++ G+ D Y ++ A+ K G E L+ E + + P+S IL
Sbjct: 493 YSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSV--MPNSITC-NILVGG 549
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G + +M GI + +++ +L+ + + ++ K G+ +
Sbjct: 550 LSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKAN 609
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
EV+ L+ + GM ++ V+ +M ++ +++G K A+ Y
Sbjct: 610 REVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYT 669
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q++++G PG TY ++ GL SKA ++ +M+ G D Y+++++ +GK G
Sbjct: 670 QMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIG 729
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
++A++ +M KG P YN L++ + + Q
Sbjct: 730 NKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQ 768
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/365 (19%), Positives = 153/365 (41%), Gaps = 58/365 (15%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M S G++LD Y +M+ F+K G + +A F E Y +L + L +
Sbjct: 427 MMSKGLLLDRVNYTSLMDGFFKTG---RESAAFTMAEKMAETGIKFDVVAYNVLINGLLR 483
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G+ ++ + ++E G+ D + Y ++I ++ +++ A +L+ E + ++ +
Sbjct: 484 LGK-YDAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSIT 542
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
LV + G E+ ++V+ M + + I ++N SK ++++++L+
Sbjct: 543 CNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLV 602
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
G + Y S+I C +G+ +A V M ++G V Y++++ + K+ I
Sbjct: 603 GMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIE 662
Query: 253 DAM-----------------------------------RLVAKMKPKGCEPNVWIYNSLM 277
A+ +++KMK G +P+ +YN+L+
Sbjct: 663 KALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLI 722
Query: 278 DMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
HG+ N ++ +KFY E G V + +++ F+K+
Sbjct: 723 SGHGKIGNKKE-------------------AIKFYCEMVTKGLVPKTSTYNVLIEDFAKV 763
Query: 338 SQIEE 342
++++
Sbjct: 764 GKMDQ 768
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G ++ + +M G+L + + L+ ++ + + +A +L + + + D
Sbjct: 24 TGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRNVD---IDVDTVT 80
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQL 191
+ + + ++G+ + + M + D +C ++V GF + + V + L
Sbjct: 81 YNTAIWGFCQQGLANQGFGFLSIMVKKD-TFFDSFTCNILVKGFCRIGSVKYGEWVMDNL 139
Query: 192 I--------SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
I + P VTY ++I+AYC+ S+A ++ EM GF VV YSS++
Sbjct: 140 IDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIIN 199
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G + +A L+ +M G PN +Y L+D
Sbjct: 200 GLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVD 234
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+LC LG + RA +L +M ++GI D Y +LI + ++ A + + +
Sbjct: 619 VLC-GLGMTKRATLVL---NNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNE 674
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ + + L+ + G++ K E++ MK++ L+ + +++G K A
Sbjct: 675 GVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEA 734
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+K Y +++++G +P TY +I + ++G +A ++ EMQ + Y ++
Sbjct: 735 IKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICG 794
Query: 245 Y-------------GKTGRIRDAMRLVAKMKPKGCEP 268
+ KT R +A L A+M KG P
Sbjct: 795 WCNLSKQPELDRISKKTYRT-EARTLFAEMNEKGFVP 830
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + +Y +M + G+V + Y ++E F K+G ++ L E + R++ P ++
Sbjct: 730 NKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRV---PPNSS 786
Query: 62 MYKIL------------CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA 109
Y IL D + K E F +M EKG + + A + +FA
Sbjct: 787 TYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENTLACISSTFARPG 846
Query: 110 EVKVAEELFKE 120
V A+ + K+
Sbjct: 847 MVVDAKHMLKD 857
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 140/289 (48%), Gaps = 30/289 (10%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y + G + L+ +M+ +GI + Y++L+ E+ +A++++K+
Sbjct: 1 YTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQ 60
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE-------VVESMKNAELNISDCISCVIVN 173
E+G +L + L+ + E KT E +V S AE+ + +++
Sbjct: 61 MLEEGCSPNLVTYNILIDV---EASKRKTTERRRLAVALVRSGIQAEVRTYN----TVIS 113
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+K A+KVYE++++ G P TY ++I+AY + G KA +F +M ++G ++
Sbjct: 114 ACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCER 173
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM--HG----RAKNL- 286
V+ YSS+++ K GR A+ L +KM + C+PNV YNSL+ HG +A L
Sbjct: 174 NVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELF 233
Query: 287 RQLE---------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
Q++ Y +I+AY ++ +K + + + G D A+
Sbjct: 234 EQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAV 282
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 105/217 (48%), Gaps = 4/217 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL D + E + + GI + Y ++I + + + A +++++
Sbjct: 73 YNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQPEQALKVYEKML 132
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRA 180
G+ + L+ Y ++G VEK L++ M + E N+ S +++ K
Sbjct: 133 AAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSS--LISACEKAGR 190
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ A++++ ++ + C P VTY S+I A G + KA ++F +MQ +G + Y
Sbjct: 191 WEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCG 250
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ Y + G+ R A++ +M+ +GC P+ ++NSLM
Sbjct: 251 LITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSLM 287
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 3/245 (1%)
Query: 44 LFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLIC 103
L E SR +D + H Y L + K+ ++ M E+G + Y LI
Sbjct: 22 LVAEMRSRGIDC---NVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILID 78
Query: 104 SFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI 163
AS + L G+ ++ + ++ + G E+ L+V E M A +
Sbjct: 79 VEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKP 138
Query: 164 SDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
S +++ + K+ A+ ++ +I +GC +TY+S+I+A + G + A ++F
Sbjct: 139 SATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELF 198
Query: 224 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+M ++ VV Y+S++A G A L +M+ +GC+P+ Y L+ + R
Sbjct: 199 SKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERG 258
Query: 284 KNLRQ 288
R+
Sbjct: 259 GQWRR 263
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 38/201 (18%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L YEKM +AG+ + Y ++ A+ K G EK
Sbjct: 125 LKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKA------------------------- 159
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L FRDM +G + Y+SLI + ++A ELF + ++
Sbjct: 160 -------------LDIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENC 206
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L+ G EK E+ E M+ C ++ + + + A+K
Sbjct: 207 KPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALK 266
Query: 187 VYEQLISQGCIPGQVTYASII 207
+EQ+ SQGC P + S++
Sbjct: 267 AFEQMQSQGCHPDAAVFNSLM 287
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 16/157 (10%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY ++I+ +A ++ EM+ +G D V YS+++ + K + A + +M
Sbjct: 2 TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 61
Query: 262 KPKGCEPNVWIYNSLMDMHG----------------RAKNLRQLEKYTTVISAYNMAREF 305
+GC PN+ YN L+D+ R+ ++ Y TVISA N + +
Sbjct: 62 LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQP 121
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +K Y + G ++ + K Q+E+
Sbjct: 122 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEK 158
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 129/278 (46%), Gaps = 22/278 (7%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E L F MK+ G+ + Y SL+ + + A +L+ E +G ++ ++ L+
Sbjct: 419 EALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLM 478
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
YI + + +++ MK ++ +D V++NG + + +S+G I
Sbjct: 479 RGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFI 538
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P +TY SIIN + + G+ A V+ +M++KG ++ Y+S + Y +TG A+++
Sbjct: 539 PTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKM 598
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAY-- 299
+ ++ +G +P++ YN+L++ + N+ + Y ++I+ Y
Sbjct: 599 LNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKN 658
Query: 300 -NMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
NM +E KFY G V D + ++ FSK
Sbjct: 659 LNMMKEVS---KFYESMIKGGIVADTSTYTTLIDGFSK 693
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 141/326 (43%), Gaps = 20/326 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y M + G+V D ++ + ++ ALF+E R + M+ L +
Sbjct: 145 YAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRV---DAWMFDALMSA 201
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G + ++ F +M I D VYA I + + + A + +E +E G
Sbjct: 202 CLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTC 261
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ +V + ++ G +E+ L V + M++A + ++ ++ G+ R+ A+ +++
Sbjct: 262 DFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFK 321
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + G +P +V Y +I ++G+ KA ++ +M +G S ++
Sbjct: 322 ETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDR 381
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYT 293
R +DA+ L +M G P+V+ YN+L+ H +A LR+ + Y
Sbjct: 382 RWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYN 440
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNG 319
+++ Y D VK Y+E M G
Sbjct: 441 SLLMGYCKKGCMDEAVKLYSEMPMEG 466
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 3/263 (1%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
S G + Y I+ F K G ++ + + L P + Y D ++G
Sbjct: 534 SEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGL---PPNIITYTSFIDGYCRTG 590
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+ LK D++ +G+ D Y +LI F + A +L + G+ + V+
Sbjct: 591 CSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYN 650
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ Y M+++ + ESM + +++GFSK A+++Y +++++
Sbjct: 651 SLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAK 710
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G IP T+ ++ + CR G A+K+ EM++ V Y+ ++ Y + ++++A
Sbjct: 711 GYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEA 770
Query: 255 MRLVAKMKPKGCEPNVWIYNSLM 277
RL +M G +P+ Y+ L+
Sbjct: 771 FRLHDEMLNMGIQPDDTTYDILV 793
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 104/218 (47%), Gaps = 3/218 (1%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G G AF + ++ M+EKG+ + Y S I + +A ++ + +G+ D+
Sbjct: 555 GMMGSAFTV---YQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDI 611
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + +EG + L+++ + L + + ++ G+ K YE
Sbjct: 612 VAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYES 671
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I G + TY ++I+ + + G + A +++ EM KG+ ++++ ++G
Sbjct: 672 MIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGD 731
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
I A +L+ +M+ PNV+IYN L++ + R L++
Sbjct: 732 IDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQE 769
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 148/401 (36%), Gaps = 88/401 (21%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + +++M A I D Y + A K+GD + + E + D + Y
Sbjct: 209 EDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFD---TCDFTY 265
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ + D L K+GR E L+ +M++ G D V +L+ + EV A LFKE +
Sbjct: 266 RTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLK 325
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G++ ++ L+ + GM +K E+ M L S +++ G R +
Sbjct: 326 DGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKD 385
Query: 184 AVKVYEQLISQGCI----------------------------------PGQVTYASIINA 209
AV ++E++ G P TY S++
Sbjct: 386 AVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMG 445
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG---- 265
YC+ G +A K++ EM +GF VV Y +++ Y +A L+ +MK G
Sbjct: 446 YCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCN 505
Query: 266 -----------------CE--------------PNVWIYNSLMD------MHGRAKNLRQ 288
CE P + YNS+++ M G A + Q
Sbjct: 506 DYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQ 565
Query: 289 ----------LEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ YT+ I Y DM +K N+ R G
Sbjct: 566 QMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG 606
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 112/272 (41%), Gaps = 5/272 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M G + Y +M + D + AL E + + + + Y +L +
Sbjct: 459 YSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVS---CNDYTYNVLING 515
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ R E+ + +G + Y S+I F + A ++++ EKG+ +
Sbjct: 516 ICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPN 575
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + + Y G + L+++ ++ L ++NGF + A+++
Sbjct: 576 IITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLV 635
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L+ G P V Y S+I Y + + + K + M + G Y++++ + K G
Sbjct: 636 ILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDG 695
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ A+ L ++M KG P+ + + +L HG
Sbjct: 696 NVAFALELYSEMMAKGYIPDAFTFTAL--THG 725
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E+ KF+ M + GI+ D S Y +LI F+ V A EL+ E KG + D F L
Sbjct: 664 EVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALT 723
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
G ++ +++E M+ ++ + I +++NG+ + A ++++++++ G
Sbjct: 724 HGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQ 783
Query: 198 PGQVTYASIIN 208
P TY +++
Sbjct: 784 PDDTTYDILVS 794
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 100/240 (41%), Gaps = 5/240 (2%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S Y++M+ G+ + Y ++ + + G S+ AL + + R+ L P Y
Sbjct: 559 SAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSD--MALKMLNDVRRRGLQPDIVA-YN 615
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L + + G L+ + + G+ + VY SLI + ++ +K + ++ +
Sbjct: 616 ALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKG 675
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWA 183
G++ D + L+ + ++G V LE+ M A+ I D + + +G +
Sbjct: 676 GIVADTSTYTTLIDGFSKDGNVAFALELYSEMM-AKGYIPDAFTFTALTHGLCRSGDIDG 734
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K+ E++ P Y +IN Y R +A ++ EM G Y +V+
Sbjct: 735 AKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794
>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
Length = 690
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 3/231 (1%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G+ RAF++ F+ M+++GI D Y++LI + + + +LF +A KG+ D+
Sbjct: 300 GEMDRAFDL---FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
VF + +Y++ G + V + M ++ + +++ G + + A +Y Q
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ +G P VTY+S+I+ +C+ G ++ +M + G+ VV Y +V K G
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ AMR KM + NV ++NSL+D R + K ++ Y +
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 107/234 (45%), Gaps = 1/234 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+ PS + + D+L G + L F R + E+G V + + S+ +++VA
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERG-FRVGIVSCNKVLKGLSVDQIEVA 270
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
L + G ++ F L+ + + G +++ ++ + M+ + +++G
Sbjct: 271 SRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG 330
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+ K K++ Q + +G V ++S I+ Y + G + A V+ M +G
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPN 390
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
VV Y+ ++ + GRI +A + ++ +G EP++ Y+SL+D + NLR
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 112/264 (42%), Gaps = 42/264 (15%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILCDSLGKSG 74
G+ LD + ++ + K GD + ++ + C+ ++P+ Y IL L + G
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG----ISPNVV-TYTILIKGLCQDG 405
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
R +E + + ++G+ Y+SLI F ++ L+++ + G D+ ++
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY- 464
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
V+V+G SK+ A++ +++ Q
Sbjct: 465 ----------------------------------GVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
V + S+I+ +CR+ + +A KVF M G V +++++ + GR+ +A
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMD 278
+ L +M G EP+ Y +L+D
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLID 574
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 124/270 (45%), Gaps = 7/270 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KM++ GI D Y ++ G + L + RK++ + + L D+
Sbjct: 279 FNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN---PNVVTFNSLIDA 335
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGML 127
K G+ E K F +M ++ I DP++ Y SLI F + A+++F K L
Sbjct: 336 FAKEGKLIEAEKLFDEMIQRSI--DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 393
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ + L+ + + VE+ +E+ M L + ++ G + A K+
Sbjct: 394 PDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 453
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++++S G P +TY+ +++ C+ G KA VF +Q+ + + Y+ M+ K
Sbjct: 454 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCK 513
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G++ D L + KG +PNV IY +++
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 543
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M + G D Y ++ K GD + +L + E K++ ++ +Y + D L
Sbjct: 210 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE---ANVVIYNTIIDGL 266
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K + F M+ KGI D Y SLI + A L + E+ + ++
Sbjct: 267 CKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ + +EG + + ++ + M ++ + ++NGF A +++
Sbjct: 327 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 386
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++S+ C+P VTY ++I +C+ + ++F EM Q+G V Y++++ + G
Sbjct: 387 MVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 446
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A ++ KM G P++ Y+ L+D
Sbjct: 447 CDMAQKIFKKMVSDGVPPDIITYSILLD 474
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 143/327 (43%), Gaps = 19/327 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M++ GI + Y ++ F + S+ AL + + KL P + +L +
Sbjct: 105 EQMQNLGIPHNHYTYSILLNCFCR--RSQLPLALAVLGKMMKLGYEPDIVTLSSLL-NGY 161
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
R E + M E G D + +LI + A L +G DL
Sbjct: 162 CHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 221
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V + G ++ L +++ M+ ++ + I I++G K + A ++ +
Sbjct: 222 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNK 281
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ ++G P TY S+I+ C G +S A ++ +M ++ + VV ++S++ + K G+
Sbjct: 282 METKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGK 341
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL-------------EKYTT 294
+ +A +L +M + +PN+ YNSL++ MH R +Q+ Y T
Sbjct: 342 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 401
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGV 321
+I + A+ + ++ + E G V
Sbjct: 402 LIKGFCKAKRVEEGMELFREMSQRGLV 428
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 116/280 (41%), Gaps = 19/280 (6%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + L K G L + M++ I + +Y ++I + A +LF + E
Sbjct: 224 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKME 283
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + L+ G ++ M ++N + +++ F+K
Sbjct: 284 TKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLI 343
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K+++++I + P VTY S+IN +C +A+++F M K VV Y++++
Sbjct: 344 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 403
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+ K R+ + M L +M +G N YN T+I A
Sbjct: 404 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYN-------------------TLIQGLFQA 444
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ DM K + + +G D I++ K ++E+
Sbjct: 445 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 484
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 98/203 (48%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L K+ R E ++ FR+M ++G++ + Y +LI + +A+++FK+
Sbjct: 399 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 458
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ + L+ + G +EK L V E ++ +++ + +++ G K
Sbjct: 459 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVE 518
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ L +G P + Y ++I+ +CR GL +A+ +F EM++ G Y++++
Sbjct: 519 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 578
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ G + L+ +M+ G
Sbjct: 579 RARLRDGDKAASAELIKEMRSCG 601
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++KM S G+ D Y +++ K G EK +F + K++ + + Y I+ +
Sbjct: 454 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME---PNIYTYNIMIEG 510
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K+G+ + F + KG+ + +Y ++I F + A+ LF+E +E G L D
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPD 570
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+ L+ + +G + E+++ M++
Sbjct: 571 SGCYNTLIRARLRDGDKAASAELIKEMRS 599
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+++ +K + + + EQ+ + G TY+ ++N +CR A V +M + G
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLG 146
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ +V SS++ Y RI +A+ LV +M G +P+ +N+L +HG
Sbjct: 147 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTL--IHG 195
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 134/281 (47%), Gaps = 21/281 (7%)
Query: 58 SSTHMYKILCDSL--GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
++TH Y L + L G + EI +M +GI D S + LI + +++ A
Sbjct: 158 ANTHFYNFLLNVLVDGNKLKLVEIAH--SNMVSRGIRPDVSTFNILIKALCRAHQIRPAI 215
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
L +E E+ G+L D + F ++ +IEEG ++ + V E M A +++ V+VNGF
Sbjct: 216 LLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGF 275
Query: 176 SKRRAYWAAVKVYEQL-ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K A++ E++ + +G P + T+ ++N + G A +V M ++GFD
Sbjct: 276 CKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPD 335
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK--- 291
+ Y+S+++ K G + +A++++ +M + C PN YN+++ + + + K
Sbjct: 336 IYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLAL 395
Query: 292 -------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y ++I ++R + ++ Y E + G
Sbjct: 396 VLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKG 436
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 127/277 (45%), Gaps = 2/277 (0%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + E+M AG V+ + ++ F K G E+ A F+E S + P +
Sbjct: 245 NLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEE-ALRFIEEMSLREGFFPDK-Y 302
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ +L + L K+G L+ M +G D Y SLI + EV A ++ +
Sbjct: 303 TFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQM 362
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E+ + + ++ +E VE+ ++ + + C ++ G R +
Sbjct: 363 IERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNH 422
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++Y+++ ++GC P + TY +I++ C G +A + EM+ G + V+ Y+++
Sbjct: 423 TVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTL 482
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ + K RI +A + +M+ +G N YN+L+D
Sbjct: 483 IDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLID 519
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 99/209 (47%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
++ +++MK KG D Y LI S +++ A L KE E G R++ + L+
Sbjct: 426 MELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDG 485
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ + + + E+ + M+ ++ + +++G K A ++ +Q+I +G P
Sbjct: 486 FCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPD 545
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+ TY S++ +C+ G KA + M G + +V Y +++A K GR+ A +L+
Sbjct: 546 KFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLR 605
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
++ KG YN ++ R K ++
Sbjct: 606 TIQMKGINLTPHAYNPVIQALFRRKRSKE 634
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L DSL G+ E L ++M+ G + Y +LI F + AEE+F + E
Sbjct: 444 YNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQME 503
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G+ R+ + L+ + VE+ ++++ M L ++ F K
Sbjct: 504 LQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIK 563
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + + + S GC P VTY ++I C+ G A K+ +Q KG + AY+ ++
Sbjct: 564 KAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVI 623
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
+ R ++A+RL +M K P+ Y
Sbjct: 624 QALFRRKRSKEAVRLFREMIEKAEAPDAVTY 654
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 3/217 (1%)
Query: 72 KSGRAFEILKFFRDMK-EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K GR E L+F +M +G D + L+ + VK A E+ +G D+
Sbjct: 277 KEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDI 336
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + G V++ ++V+ M + + + I++ K A K+
Sbjct: 337 YTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALV 396
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L +G +P TY S+I C ++ A +++ EM+ KG Y+ ++ G+
Sbjct: 397 LTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK 456
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+++A+ L+ +M+ GC NV YN+L+D G KN R
Sbjct: 457 LQEALNLLKEMEVSGCARNVITYNTLID--GFCKNKR 491
>gi|384249299|gb|EIE22781.1| hypothetical protein COCSUDRAFT_47692 [Coccomyxa subellipsoidea
C-169]
Length = 1226
Score = 90.5 bits (223), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 108/216 (50%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D GK G+ + L+ R MK +GI Y +L+ + + + + A +L++E
Sbjct: 209 YNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTALQLYEEMR 268
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G + + L+ + + G + + L+ M S +++ K +
Sbjct: 269 AAGHALNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVITYSSLISACEKSGEWQ 328
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ +++ + C P +T+ S+I A + + KA ++F MQQ+G VV Y++++
Sbjct: 329 LALRFFDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQGCTPDVVTYTALI 388
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ Y + G+ + A++ M+ KGC+P+ +YN+++D
Sbjct: 389 SAYERGGKWQLALQAFQAMQAKGCKPDSIVYNAIID 424
Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 132/270 (48%), Gaps = 19/270 (7%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+C S + RA E+ DM+ +G+ + +++L+ ++K+A +++++ + G
Sbjct: 145 ICVSAQQLERALELSA---DMQRRGVQRNVHTHSALMNVCIKCGQLKLALDVWEDMQRDG 201
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
++ ++ + L+ +Y + G E+ L+V+ MK + ++ + + A+
Sbjct: 202 IVPNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTAL 261
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++YE++ + G +Y ++I+A+ + G + + +M Q+G ++ V+ YSS+++
Sbjct: 262 QLYEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVITYSSLISAC 321
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------RAKNLRQLEK-------- 291
K+G + A+R + C PNV +NSL+ +A+ L +L +
Sbjct: 322 EKSGEWQLALRFFDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQGCTPDV 381
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNG 319
YT +ISAY ++ + ++ + + G
Sbjct: 382 VTYTALISAYERGGKWQLALQAFQAMQAKG 411
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 111/243 (45%), Gaps = 22/243 (9%)
Query: 94 DPSVYASLICSFASIAEVKVAEELFK------EAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
D A+L+ A A+E F ++ E L D+ + + + + +E
Sbjct: 94 DSRACAALLKELARTGLAHRAQEFFDHVLALGDSTEAARLADVYTYTAAISICVSAQQLE 153
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ LE+ M+ + + ++N K A+ V+E + G +P VTY ++I
Sbjct: 154 RALELSADMQRRGVQRNVHTHSALMNVCIKCGQLKLALDVWEDMQRDGIVPNVVTYNTLI 213
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
+ Y ++G + +A +V M+ +G + Y++++ +G+ + A++L +M+ G
Sbjct: 214 DVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTALQLYEEMRAAGHA 273
Query: 268 PNVWIYNSLMDMHGRAKNL----------------RQLEKYTTVISAYNMAREFDMCVKF 311
N YN+L+ H +A +L R + Y+++ISA + E+ + ++F
Sbjct: 274 LNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVITYSSLISACEKSGEWQLALRF 333
Query: 312 YNE 314
++E
Sbjct: 334 FDE 336
Score = 64.7 bits (156), Expect = 6e-08, Method: Composition-based stats.
Identities = 53/245 (21%), Positives = 115/245 (46%), Gaps = 7/245 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +E M+ GIV + Y +++ + K+G E+ + + + ++ + + I
Sbjct: 191 LDVWEDMQRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIA 250
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
C++ G+ A L+ + +M+ G + + Y +LI + + ++ + +++ ++G
Sbjct: 251 CNTSGQWQTA---LQLYEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGC 307
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVV-ESMK-NAELNISDCISCVIVNGFSKRRAYWAA 184
R + + L+ + G + L E +K N N+ S ++ ++ + A
Sbjct: 308 ERSVITYSSLISACEKSGEWQLALRFFDECLKDNCRPNVITFNS--LITACAQGAQWEKA 365
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++E + QGC P VTY ++I+AY R G + A + F MQ KG + Y++++
Sbjct: 366 RELFELMQQQGCTPDVVTYTALISAYERGGKWQLALQAFQAMQAKGCKPDSIVYNAIIDT 425
Query: 245 YGKTG 249
TG
Sbjct: 426 LWDTG 430
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 19/142 (13%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
T+++++N + G A V+ +MQ+ G VV Y++++ +YGK G+ A++++ +M
Sbjct: 173 THSALMNVCIKCGQLKLALDVWEDMQRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLRRM 232
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
K +G EP YN+LM A N + ++ ++ Y E R G
Sbjct: 233 KFQGIEPVTRTYNTLM-------------------IACNTSGQWQTALQLYEEMRAAGHA 273
Query: 322 IDRAMAGIMVGVFSKLSQIEEL 343
++ ++ SK + ++
Sbjct: 274 LNTTSYNALISAHSKAGDLPQV 295
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 3/205 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L +MK GI + Y +M A G + L+ E + L +S Y
Sbjct: 223 EQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTALQLYEEMRAAGHALNTTS---Y 279
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + K+G ++L +R M ++G Y+SLI + E ++A F E +
Sbjct: 280 NALISAHSKAGDLPQVLDTYRQMVQQGCERSVITYSSLISACEKSGEWQLALRFFDECLK 339
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
++ F L+ + EK E+ E M+ +++ + + +
Sbjct: 340 DNCRPNVITFNSLITACAQGAQWEKARELFELMQQQGCTPDVVTYTALISAYERGGKWQL 399
Query: 184 AVKVYEQLISQGCIPGQVTYASIIN 208
A++ ++ + ++GC P + Y +II+
Sbjct: 400 ALQAFQAMQAKGCKPDSIVYNAIID 424
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 127/302 (42%), Gaps = 32/302 (10%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECE--SRKLDLTP--------- 57
+ EK K G++ + Y +M A+ K GD K A + K DL
Sbjct: 363 FLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVV 422
Query: 58 ---------------------SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
+Y +L L K+GR + +M ++ + D
Sbjct: 423 VHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVY 482
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
V+A+L+ F E+ A ++FK KG+ + + ++ + + G + L + M
Sbjct: 483 VFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKM 542
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
KN + +++G+ K+ +A+K++ Q++ P +TY S+IN +C+
Sbjct: 543 KNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADM 602
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+AEKVF M+ VV Y+++V + K G+ A + M GC PN ++ L
Sbjct: 603 IRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYL 662
Query: 277 MD 278
++
Sbjct: 663 IN 664
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 132/272 (48%), Gaps = 13/272 (4%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLT--PSSTHMYKILCDS 69
+M + G+ ++ + +++A +K G K A E R ++ P T Y + +
Sbjct: 296 EMAARGLNMNVKVFNNVIDAEFKYGLVTKAA----ETMRRMAEMGCGPDIT-TYNTMINF 350
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE-VKVAEELFKEAE--EKGM 126
K GR E +F KE+G+L + Y L+ ++ + VK A LF+ AE EK
Sbjct: 351 SCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPD 410
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L F+ V+++ G ++ L V E M + I V+++G K + A
Sbjct: 411 LVSYGAFIHGVVVH---GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKL 467
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ +++ + P +A++++ + R G +A K+F + +KG D +V Y++M+ +
Sbjct: 468 LLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFC 527
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G++ DA+ + KMK P+ + Y++++D
Sbjct: 528 KFGKMTDALSCLNKMKNVHHAPDEYTYSTVID 559
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 39/271 (14%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y ++ D K G + +++K KG+L Y +LI F E + ++L E
Sbjct: 239 YNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMA 298
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC--VIVNGFSKRRA 180
+G+ +++VF ++ + G+V K E + M AE+ I+ ++N K
Sbjct: 299 ARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRM--AEMGCGPDITTYNTMINFSCKGGR 356
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A + E+ +G +P + +Y +++AYC+ G Y KA + + + G +V+Y +
Sbjct: 357 IKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGA 416
Query: 241 M---VAMYG--------------------------------KTGRIRDAMRLVAKMKPKG 265
V ++G K GR L+++M +
Sbjct: 417 FIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRN 476
Query: 266 CEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
+P+V+++ +LMD R L + K VI
Sbjct: 477 VQPDVYVFATLMDGFIRNGELDEAIKIFKVI 507
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 104/223 (46%), Gaps = 20/223 (8%)
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
L+ SF E+++ E K K E F L+L Y E G +++ L++ +++
Sbjct: 100 LLASFRVFPEIELVLENMKAQHLKPTR---EAFSALILAYGESGSLDRALQLFHTVR--- 153
Query: 161 LNISDCISCVI-----VNGFSKRRAYWAAVKVYEQLI----SQGCIPGQVTYASIINAYC 211
+ +C+ V+ +NG K A+++Y++++ G + T + ++ C
Sbjct: 154 -EMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLC 212
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+G + ++ + KG VV Y+ ++ Y K G ++ A R + ++K KG P V
Sbjct: 213 NLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVE 272
Query: 272 IYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNE 314
Y +L++ +A +++ T ++ AR +M VK +N
Sbjct: 273 TYGALINGFCKAGEFEAVDQLLTEMA----ARGLNMNVKVFNN 311
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 115/306 (37%), Gaps = 56/306 (18%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
EKM G+ D+ Y +M K G + L E R + +++ L D
Sbjct: 435 EKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQ---PDVYVFATLMDGF 491
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLR 128
++G E +K F+ + KG+ DP + Y ++I F ++ A + +
Sbjct: 492 IRNGELDEAIKIFKVIIRKGV--DPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAP 549
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + ++ Y+++ + L++ M + + ++NGF K+ A KV+
Sbjct: 550 DEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVF 609
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF------------------------- 223
+ S +P VTY +++ + + G KA +F
Sbjct: 610 RGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNT 669
Query: 224 ------IE------------------MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
IE M +G+D+ + AY+S++ K G + A L+
Sbjct: 670 ATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLT 729
Query: 260 KMKPKG 265
KM KG
Sbjct: 730 KMLTKG 735
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 37/258 (14%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
I+ L G+ E + +D KG + Y +I + +++ A KE + K
Sbjct: 206 IVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMK 265
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+L +E + L+ + + G E +++ M LN++ + +++ K A
Sbjct: 266 GVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKA 325
Query: 185 VKVYEQLISQGCIPGQVTYASIIN-----------------------------------A 209
+ ++ GC P TY ++IN A
Sbjct: 326 AETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHA 385
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
YC+ G Y KA + + + G +V+Y + + G I A+ + KM KG P+
Sbjct: 386 YCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPD 445
Query: 270 VWIYNSLMDMHGRAKNLR 287
IYN LM G KN R
Sbjct: 446 AQIYNVLMS--GLCKNGR 461
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 111/214 (51%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y ++ + + + GR + ++F +++ G + Y ++ + + AE+L +E
Sbjct: 239 YNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMA 298
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG ++ F L+ G+VE +EV+E M + +++ F K++
Sbjct: 299 HKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIH 358
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ E ++S+GC P V+Y +++ A CR G A ++ +++ KG +++Y++++
Sbjct: 359 KAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVI 418
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
K G+ ++A+ L+ +M KG +P++ Y+++
Sbjct: 419 DGLTKAGKTKEALELLDEMTSKGLQPDIITYSTI 452
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y L L GR L DM +G L D Y L+ + + K A +L E
Sbjct: 167 YTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDE 226
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+KG D+ + ++ +EG VE +E ++++ + + +++ G
Sbjct: 227 MHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAER 286
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ A K+ E++ +GC P VT+ +I+ CR GL A +V +M Q G ++Y+
Sbjct: 287 WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNP 346
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ + K +I AM V M +GC P++ YN+L+
Sbjct: 347 LLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLL 383
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 101/236 (42%), Gaps = 3/236 (1%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + +L L + G ++ M + G + Y L+ +F ++ A E
Sbjct: 303 PPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAME 362
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ +G D+ + L+ G V+ +E++ +K+ + +++G +
Sbjct: 363 FVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLT 422
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A+++ +++ S+G P +TY++I + CR +A + F ++Q G
Sbjct: 423 KAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAA 482
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
Y++++ K +A+ L A M GC PN Y L++ G K R+L
Sbjct: 483 LYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEAREL 538
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 75/168 (44%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L +L ++G ++ +K+KG Y ++I + K A EL E
Sbjct: 379 YNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMT 438
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + + E +E+ + +++ + + + I+ G KRR
Sbjct: 439 SKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETH 498
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
A+ ++ +IS GC+P + TY ++ GL +A ++F ++ +G
Sbjct: 499 NAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 135/278 (48%), Gaps = 3/278 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ + EK++++G+V D Y +M + K G + + AL E + L P+ Y L
Sbjct: 267 MFFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEEM--KWYGLRPN-LKAYNTL 323
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ G+ +I +++ G+ + Y LI ++A + E L++E + +
Sbjct: 324 LGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRDCDI 383
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ ++ +++ +Y + G +K ++++ M+ A + + VI+N F + R A
Sbjct: 384 RPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARI 443
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ ++ G P V++ S+I+A C+ G +A K++ +M G ++ ++ G
Sbjct: 444 AFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVIHGLG 503
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+ R D +V +M+ KG PNV Y +L+D++ +A+
Sbjct: 504 EHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQAR 541
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 126/273 (46%), Gaps = 4/273 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEA-FYKIGDSEKVAALFLECESRKLDLTPSSTHMYKI 65
L KMK+ G D Y +++A + + D LF E ++ + + +Y
Sbjct: 196 LETLSKMKTLGFPPDVVSYTHVIQACRHGVVDIYTGFRLFQEMQAEGVQV---DGKVYND 252
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + G++ + E + F ++ G++ D Y SL+ S AE L +E + G
Sbjct: 253 LIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEEMKWYG 312
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ +L+ + L+ Y +G +++ V +++ ++I+ C++++ +++
Sbjct: 313 LRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLE 372
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+Y+++ P YA +I Y G + K K+ EMQQ G Y+ ++ +
Sbjct: 373 ALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTF 432
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G+T ++ A KM+ G EP+V +NSL+D
Sbjct: 433 GRTRQLEQARIAFFKMQDGGIEPDVVSWNSLID 465
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 16/233 (6%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL------DLTP 57
Q+++ ++ KM+ GI D + +++A K G E+RKL D
Sbjct: 440 QARIAFF-KMQDGGIEPDVVSWNSLIDACCKAGQP---------LEARKLYYKMVNDGCA 489
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + I+ LG+ R ++ + +M+ KG+ + Y +L+ +A + A E
Sbjct: 490 PTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVEC 549
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+ +E GM + L Y + GM E+TL V+++M+ + I+ + +++N FS
Sbjct: 550 LQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSM 609
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
A V+E + G ++TY +++ A R + VF EM + G
Sbjct: 610 AGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSGVFDEMIKAG 662
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 151 EVVESMK-NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
E++E ++ N+ D + V+++G+ + R A++V E+L S G Y +++ A
Sbjct: 129 ELLEWLRENSFCRTYDVLDSVVIHGYGRERKLHKALEVAEKLGSNLQRRG---YNALVGA 185
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMRLVAKMKPKGCEP 268
Y + Y KA + +M+ GF VV+Y+ ++ A I RL +M+ +G +
Sbjct: 186 YAQNRDYGKALETLSKMKTLGFPPDVVSYTHVIQACRHGVVDIYTGFRLFQEMQAEGVQV 245
Query: 269 NVWIYNSLMDMHGRA 283
+ +YN L+ G+A
Sbjct: 246 DGKVYNDLIFACGQA 260
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 20/231 (8%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ LC +GK +AF+++K +M KG + D S Y+ +I +V+ A LF+E +
Sbjct: 261 RCLC-GVGKFDKAFQLIK---EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 316
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D+ + L+ + + G++E+ + E M++ + + +++ + K +
Sbjct: 317 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 376
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM----------------Q 227
A ++ +++ GC P VTY ++++ C+ G SKA +V+ ++
Sbjct: 377 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 436
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ VV Y ++V K ++ A L+ M GCEPN +Y++L+D
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 487
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 133/324 (41%), Gaps = 56/324 (17%)
Query: 35 IGDSEKVAA-LFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
IG S+ + + CE R L P+ Y L D L K+ + + M G
Sbjct: 420 IGTSDSADSDFYFPCEDRH-TLAPNVV-TYGALVDGLCKAHKVDHAHELLDAMLSSGCEP 477
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ VY +LI F ++ A+E+F + + G L + + L+ ++G ++
Sbjct: 478 NHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD------ 531
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
A+KV Q++ C P VTY ++I+ CRI
Sbjct: 532 -----------------------------LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G KA K+ M++KG VV Y++++ GK G+I ++ L +M KGC PN Y
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622
Query: 274 NSLMD------MHGRAKNL----------RQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
L++ + +A+ L + L+ Y I + ++ F + E
Sbjct: 623 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMES 680
Query: 318 NGGVIDRAMAGIMVGVFSKLSQIE 341
G V + G+++ FSK ++E
Sbjct: 681 YGTVPIAPVYGMLIDCFSKAGRLE 704
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 125/353 (35%), Gaps = 97/353 (27%)
Query: 8 HYYEKMKSAGIVLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
H +E + + +L SGC Y +++ F K G + +FL+ K PS H
Sbjct: 462 HAHELLDA---MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ--MTKCGYLPS-VH 515
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D + K GR +K M + + Y ++I I E + A +L
Sbjct: 516 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 575
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
EEKG ++ + L+ +G K
Sbjct: 576 EEKGCSPNVVTYTALI-----------------------------------DGLGKAGKI 600
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ------------- 228
++ ++ Q+ +GC P VTY +IN C GL KA + EM+Q
Sbjct: 601 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 660
Query: 229 -KGFDKCVVA-------------------YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+GF K +A Y ++ + K GR+ AM L
Sbjct: 661 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMEL----------- 709
Query: 269 NVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
+ +M++ K + Y ++I A +A + + + Y+E G V
Sbjct: 710 ----HKEMMEVPSSVKTDNDM--YASLIQALCLASQVEEAFRLYSEMTRRGFV 756
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 133/357 (37%), Gaps = 34/357 (9%)
Query: 11 EKMKSAGIVLDS---GCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
++M +G +D GC+ + + D A +E E KLD T THM
Sbjct: 64 KEMSESGFCMDRFTVGCFAHALCKEGRWAD----ALDMIEREDFKLD-TVLCTHMIS--- 115
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
L ++ E + F M+ + + Y +L+ F ++ + + +G
Sbjct: 116 -GLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCN 174
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA---- 183
+ +F LV Y E +++ M + + + + +
Sbjct: 175 PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLL 234
Query: 184 --AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K+Y ++++ C+ +V A+ C +G + KA ++ EM +KGF YS +
Sbjct: 235 DLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKV 294
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE----------- 290
+ ++ A L +MK G P+V+ Y L+D +A + Q +
Sbjct: 295 ITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC 354
Query: 291 -----KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I AY A++ ++ G + G +V K I +
Sbjct: 355 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 411
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKE--KGILEDPSVYASLICSFASIAEVKVAEELFK 119
+Y +L D K+GR ++ ++M E + D +YASLI + ++V+ A L+
Sbjct: 689 VYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYS 748
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
E +G + +L VF+ L+ +G+VE
Sbjct: 749 EMTRRGFVPELSVFVCLI-----KGLVE 771
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 35/240 (14%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ D L K GR E + F +MK +G++ Y SLI F + + ++ L E
Sbjct: 218 YNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEML 277
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G+ D+ F L+ +EG +V+E
Sbjct: 278 DQGLQPDMVTFNVLIDTLCKEG------KVIE---------------------------- 303
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A K+ +I G +P VTY S+I +C +G + A ++F+ M KG + V++Y+ ++
Sbjct: 304 -AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 362
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
Y KT ++ +AM+L +M G PNV Y+SL+ A + +K +V+ A+ +A
Sbjct: 363 NGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIA 422
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 143/335 (42%), Gaps = 25/335 (7%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH++ M + + ++ KI +V +L+ +L S IL
Sbjct: 54 LHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLY---NQMRLSGLSSDRCTLNIL 110
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L R E F + +G + Y +LI + A LF ++ G
Sbjct: 111 LNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGC 170
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA----ELNISDCISC--VIVNGFSKRRA 180
D+ + L+ G + L++ + M N E+N + +IV+G K
Sbjct: 171 TPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGR 230
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +++E++ +QG IP ++Y S+I+ +C G + +++++ EM +G +V ++
Sbjct: 231 EDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNV 290
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL-------- 289
++ K G++ +A +L+ M G P++ YNSL++ M G + R+L
Sbjct: 291 LIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG 350
Query: 290 -----EKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y +I+ Y+ + + +K YNE + G
Sbjct: 351 CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVG 385
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 128/268 (47%), Gaps = 5/268 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M +GIV D Y ++E F +GD LF+ S+ + S Y +L + K
Sbjct: 311 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVIS---YNVLINGYSK 367
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ + E +K + +M G + Y SL+ +V A++LF + G+ +
Sbjct: 368 TLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYT 427
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNIS-DCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ + + + + +++ +K++ + + ++C+I +G K A +++E+L
Sbjct: 428 YGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLI-DGLCKAGKLETAWELFEKL 486
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
++G P VTY +I+ +CR G KA + +M+ G ++ Y++++ + ++ ++
Sbjct: 487 SNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKL 546
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ ++L+ +M K P+ + ++DM
Sbjct: 547 EEVVQLLHRMAQKDVSPDAITCSIVVDM 574
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 133/309 (43%), Gaps = 38/309 (12%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q +++K+ + G D Y ++ K+G++ L + +L + MY
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDG---NLVQPNVVMY 228
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ DS+ K E F +M KGI D Y++LI F + ++K A +LF +
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288
Query: 124 KGMLRDLEVFLKLVLMYIEEGM-----------------------------------VEK 148
+ + D+ F LV + ++G V K
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+ +M +N +++NGF K + + A+ +++++ + IP VTY+S+I+
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+ G S A ++ +M +G + Y+S++ KT ++ A+ L+ K K KG +P
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468
Query: 269 NVWIYNSLM 277
++ Y+ L+
Sbjct: 469 DISTYSILI 477
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F M + G+ D Y+ +I F I + A LFKE K ++ D+ + L+ +
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G + L++V+ M + + + C I++ K A+ + + +G P T
Sbjct: 413 SGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIST 472
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y+ +I C+ G A KVF ++ KG++ V AY+ M+ + G +A+ L++KM+
Sbjct: 473 YSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKME 532
Query: 263 PKGCEPNVWIY 273
GC P+ Y
Sbjct: 533 DNGCIPDAKTY 543
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 141/334 (42%), Gaps = 19/334 (5%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y F+ D + +LF R + TP + KIL SL KS +L +
Sbjct: 53 YSSTSTTFHSNNDVDDAVSLFNRLLRR--NTTPPAFEFNKIL-GSLVKSKHYHTVLYLSQ 109
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M+ +GI + LI F + + A +F + + G + D F L +G
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKG 169
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ + + + +++G K AA+ + +++ P V Y
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+II++ C++ L ++A +F EM KG VV YS++++ + G+++DA+ L KM +
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILE 289
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDMC 308
+P+V+ +N L++ + +++ Y +++ Y + +E +
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+N G D IM+ F K+ + +E
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDE 383
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 3/221 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M G+ D Y ++ F KI ++ LF E + ++ P Y L D
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK--NIIPDVV-TYSSLIDG 409
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR L+ M ++G+ + Y S++ + +V A L + ++KG D
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPD 469
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G +E +V E + N+ +++ GF + A+ +
Sbjct: 470 ISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLS 529
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ GCIP TY II + + AEK+ EM +G
Sbjct: 530 KMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/262 (18%), Positives = 108/262 (41%), Gaps = 3/262 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M GI + Y +M+ + + + K ++F ++ Y I+ +
Sbjct: 318 FDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN---PDIQSYSIMING 374
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K + E + F++M K I+ D Y+SLI + + A +L + ++G+ +
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPN 434
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ + V+K + ++ K+ +++ G + A KV+E
Sbjct: 435 ICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFE 494
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L+ +G Y +I +C GL+++A + +M+ G Y ++ K
Sbjct: 495 DLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKD 554
Query: 250 RIRDAMRLVAKMKPKGCEPNVW 271
A +L+ +M +G N +
Sbjct: 555 ENDMAEKLLREMIARGLPLNFY 576
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 154/338 (45%), Gaps = 24/338 (7%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
S L + KM++ G +S + ++E F K G+ EK + + ES L LTPS H++
Sbjct: 356 SALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMES--LGLTPSVFHVHT 413
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
I+ L K + E LK F + E G L + + +++ ++ A EL ++ E +
Sbjct: 414 IIQGWL-KGQKHEEALKLFDESFETG-LANVFICNTILSWLCKQGKIDKATELLRKMESR 471
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ ++ + ++L + + ++ V +M L ++ ++++G K
Sbjct: 472 GIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNV 531
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM-QQKGFDKCVVAYSSMVA 243
++V Q+ S V Y +IIN C++G SKA ++ M ++K F ++Y+S++
Sbjct: 532 LEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIID 591
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
+ K G + A+ +M G PNV Y SLMD G KN R
Sbjct: 592 GFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMD--GLCKNNR---------------- 633
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
D ++ +E + G +D G ++ F K S +E
Sbjct: 634 -MDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNME 670
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 121/254 (47%), Gaps = 5/254 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
Y I++ F K G+ + A + E C + ++P+ Y L D L K+ R + L+
Sbjct: 586 YNSIIDGFIKEGEMDYAVAAYEEMCAN---GISPNVI-TYTSLMDGLCKNNRMDQALEMR 641
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+MK KG+ D Y +LI F + ++ A LF E E+G+ V+ L+ +
Sbjct: 642 DEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNL 701
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G + L++ + M L +++G K A +Y ++ + G +P ++ Y
Sbjct: 702 GNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMY 761
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
I+N + G + K K+F EM++ V+ Y++++A + + G + +A RL +M
Sbjct: 762 TVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLD 821
Query: 264 KGCEPNVWIYNSLM 277
KG P+ ++ L+
Sbjct: 822 KGILPDGATFDILV 835
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 125/288 (43%), Gaps = 4/288 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSST 60
+ Q+ L +M S+ I ++ Y I+ K+G + K L E ++ ++ S
Sbjct: 527 DEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMS- 585
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y + D K G + + +M GI + Y SL+ + A E+ E
Sbjct: 586 --YNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDE 643
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ KG+ D+ + L+ + ++ +E + + LN S + +++GF
Sbjct: 644 MKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGN 703
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AA+ +Y++++ G TY ++I+ + G A ++ EMQ G + Y+
Sbjct: 704 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTV 763
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+V K G+ +++ +MK PNV IYN+++ H R NL +
Sbjct: 764 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDE 811
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + + G DS Y ++A K + +L E + +KL + T+ IL
Sbjct: 252 LEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVIL 311
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
K G + +++ +M GI + SLI ++ A +LF + E +G
Sbjct: 312 ASV--KQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGP 369
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ F L+ + + G +EK LE + M++ L S I+ G+ K + + A+K
Sbjct: 370 SPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALK 429
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++++ G + +I++ C+ G KA ++ +M+ +G VV+Y++++ +
Sbjct: 430 LFDESFETG-LANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHC 488
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ + A + + M KG +PN + Y+ L+D
Sbjct: 489 RKKNMDLARTVFSNMLEKGLKPNNYTYSILID 520
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + L Y+KM G+ D G Y +++ K G+ + L+ E ++ + L P
Sbjct: 703 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQA--VGLVPDEI- 759
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
MY ++ + L K G+ +++K F +MK+ + + +Y ++I + A L E
Sbjct: 760 MYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 819
Query: 122 EEKGMLRDLEVFLKLV 137
+KG+L D F LV
Sbjct: 820 LDKGILPDGATFDILV 835
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/204 (18%), Positives = 83/204 (40%), Gaps = 36/204 (17%)
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM-LRDLEVF 133
+ E L+ F E+G D +Y+ + + + +A L +E +EK + + E +
Sbjct: 247 KPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETY 306
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++L +++G +E A++ ++++S
Sbjct: 307 TSVILASVKQGNMED-----------------------------------AIRWKDEMVS 331
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
G V S+I +C+ A +F +M+ +G V +S ++ + K G +
Sbjct: 332 DGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEK 391
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLM 277
A+ KM+ G P+V+ ++++
Sbjct: 392 ALEFYKKMESLGLTPSVFHVHTII 415
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA---YSS 240
A++V+ + I +G P + Y+ + A C+ + A + EM++K CV + Y+S
Sbjct: 251 ALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKL--CVPSQETYTS 308
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
++ K G + DA+R +M G NV SL+ H + +L
Sbjct: 309 VILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDL 354
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 20/231 (8%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ LC +GK +AF+++K +M KG + D S Y+ +I +V+ A LF+E +
Sbjct: 261 RCLC-GVGKFDKAFQLIK---EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 316
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D+ + L+ + + G++E+ + E M++ + + +++ + K +
Sbjct: 317 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 376
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM----------------Q 227
A ++ +++ GC P VTY ++++ C+ G SKA +V+ ++
Sbjct: 377 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 436
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ VV Y ++V K ++ A L+ M GCEPN +Y++L+D
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 487
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 133/324 (41%), Gaps = 56/324 (17%)
Query: 35 IGDSEKVAA-LFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
IG S+ + + CE R L P+ Y L D L K+ + + M G
Sbjct: 420 IGTSDSADSDFYFPCEDRH-TLAPNVV-TYGALVDGLCKAHKVDHAHELLDAMLSSGCEP 477
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ VY +LI F ++ A+E+F + + G L + + L+ ++G ++
Sbjct: 478 NHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD------ 531
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
A+KV Q++ C P VTY ++I+ CRI
Sbjct: 532 -----------------------------LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G KA K+ M++KG VV Y++++ GK G+I ++ L +M KGC PN Y
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622
Query: 274 NSLMD------MHGRAKNL----------RQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
L++ + +A+ L + L+ Y I + ++ F + E
Sbjct: 623 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMES 680
Query: 318 NGGVIDRAMAGIMVGVFSKLSQIE 341
G V + G+++ FSK ++E
Sbjct: 681 YGTVPIAPVYGMLIDCFSKAGRLE 704
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 125/353 (35%), Gaps = 97/353 (27%)
Query: 8 HYYEKMKSAGIVLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
H +E + + +L SGC Y +++ F K G + +FL+ K PS H
Sbjct: 462 HAHELLDA---MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ--MTKCGYLPS-VH 515
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D + K GR +K M + + Y ++I I E + A +L
Sbjct: 516 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 575
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
EEKG ++ + L+ +G K
Sbjct: 576 EEKGCSPNVVTYTALI-----------------------------------DGLGKAGKI 600
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ------------- 228
++ ++ Q+ +GC P VTY +IN C GL KA + EM+Q
Sbjct: 601 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 660
Query: 229 -KGFDKCVVA-------------------YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+GF K +A Y ++ + K GR+ AM L
Sbjct: 661 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMEL----------- 709
Query: 269 NVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
+ +M++ K + Y ++I A +A + + + Y+E G V
Sbjct: 710 ----HKEMMEVPSSVKTDNDM--YASLIQALCLASQVEEAFRLYSEMTRRGFV 756
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 16/175 (9%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K+Y ++++ C+ +V A+ C +G + KA ++ EM +KGF YS ++
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------- 290
++ A L +MK G P+V+ Y L+D +A + Q +
Sbjct: 297 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 356
Query: 291 ---KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I AY A++ ++ G + G +V K I +
Sbjct: 357 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 411
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKE--KGILEDPSVYASLICSFASIAEVKVAEELFK 119
+Y +L D K+GR ++ ++M E + D +YASLI + ++V+ A L+
Sbjct: 689 VYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYS 748
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
E +G + +L VF+ L+ +G+VE
Sbjct: 749 EMTRRGFVPELSVFVCLI-----KGLVE 771
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 146/340 (42%), Gaps = 56/340 (16%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
+L P H +L +SL K G + K ++ M + G++ + VY LI + + +V+
Sbjct: 160 NLKPH-LHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVER 218
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN----------- 162
AE + E E KG++ D+ + L+ +Y ++G+ + L V + M+ +N
Sbjct: 219 AEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIY 278
Query: 163 -----------------ISDCIS-----CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
I D I +++G+ K + A+++ E ++++G PG
Sbjct: 279 GFCKEGKMREAMRMFGEIKDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGV 338
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY SI+ C G A K+ EM ++ V ++++ Y K G + A++ K
Sbjct: 339 VTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTK 398
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-------------------YTTVISAYNM 301
M G PN + Y +L +HG K +LE Y+ ++ +Y
Sbjct: 399 MLEAGLTPNSFTYKAL--IHGFCKT-SELESAKELLFGMLDAGFSPNYRTYSWIVDSYCK 455
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
D + +EF G ++ ++ ++ K+ +IE
Sbjct: 456 KDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIE 495
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M ++ IL PSV SL+ + + E V +V+ Y + M
Sbjct: 104 MAQREILSSPSVLTSLV-------------RIHDDPEVNS-----HVLSWIVIHYAKSKM 145
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
++V E M L V++N K KVY++++ G +P Y
Sbjct: 146 THDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNC 205
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+I+A + +AE + EM+ KG + Y++++A+Y K G +A+ + KM+ +G
Sbjct: 206 LIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREG 265
Query: 266 CEPNVWIYNSL-------------MDMHGRAKN-LRQLEKYTTVISAYNMAREFDMCVKF 311
++ YNSL M M G K+ + YTT+I Y A EF+ ++
Sbjct: 266 INLDIVSYNSLIYGFCKEGKMREAMRMFGEIKDAIPNHVTYTTLIDGYCKANEFEEALRL 325
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 116/268 (43%), Gaps = 7/268 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M+ G+V D Y ++ + K G + ++ + E ++L S Y L
Sbjct: 224 NEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVS---YNSLIYGF 280
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G+ E ++ F ++K+ + + Y +LI + E + A L + KG+ +
Sbjct: 281 CKEGKMREAMRMFGEIKDA--IPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGV 338
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYE 189
+ ++ +G + +++ M ++ +D ++C ++N + K +A+K
Sbjct: 339 VTYNSILRKLCSDGRIRDANKLLHEMSERKVQ-ADSVTCNTLINAYCKIGDLNSALKFKT 397
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ G P TY ++I+ +C+ A+++ M GF YS +V Y K
Sbjct: 398 KMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKD 457
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ L + KG N+ +Y +L+
Sbjct: 458 NTDAVLALPDEFLSKGFCLNISLYRALI 485
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 119/323 (36%), Gaps = 45/323 (13%)
Query: 7 LHY-----YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
LHY +KM+ GI LD Y ++ F K G + +F E + D P+
Sbjct: 250 LHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIK----DAIPNHV- 304
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D K+ E L+ M KG+ Y S++ S ++ A +L E
Sbjct: 305 TYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEM 364
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR--- 178
E+ + D L+ Y + G + L+ M A L + +++GF K
Sbjct: 365 SERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSEL 424
Query: 179 -------------------RAY-W------------AAVKVYEQLISQGCIPGQVTYASI 206
R Y W A + + ++ +S+G Y ++
Sbjct: 425 ESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRAL 484
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I C+I AEK+ M+ KG V Y+S+ Y K+G A ++ +M +
Sbjct: 485 IRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRL 544
Query: 267 EPNVWIYNSLMDMHGRAKNLRQL 289
V IY + + Q+
Sbjct: 545 MITVKIYRCFSALDASQNKVSQM 567
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 146/335 (43%), Gaps = 24/335 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF-LECESRKLDLTPSSTHMYKILCD 68
++++ + G + Y +M+++ + G + V +F L +S + P + MY ++
Sbjct: 212 FQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDA-RMYNLMIH 270
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ GK G+ + + ++ MK + + + SL+ A K AE++F++ + +
Sbjct: 271 TYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLL---ACQKTWKDAEDVFRKLQAAKLDP 327
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + LV Y + E + M A + + ++N ++K + A V
Sbjct: 328 DVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVL 387
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+Q+ GC P +Y S+I+AY + L +KAE+ + M++ + + ++ Y
Sbjct: 388 KQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCVLMTGYANG 447
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
++ + MR MK G EPN + YT +++AY +FD
Sbjct: 448 NKLDNMMRSFETMKLAGLEPNRHV-------------------YTVLVNAYGSNDDFDSA 488
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ +Y + G D + +++ + Q EE+
Sbjct: 489 IIWYKQMLGTGYKPDPILRTVLLKIAKSHEQTEEI 523
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 13/191 (6%)
Query: 146 VEKTLEVVESMKN--AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP-GQVT 202
VEK+ E + +K + NIS + F + +A+ +K E L+ QG Q
Sbjct: 97 VEKSPEPLAILKKYAGDGNISRESVVGTLTRFKQMQAWKIIIKFTEWLMEQGWYNFNQKD 156
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y ++ AYC+ G K E +F M + G + Y+ + YG+ A + ++
Sbjct: 157 YFLVLLAYCKDGQVDKTEGIFQRMAELGVVANIEMYTLQIEGYGRRRSFDKAEAVFQRLL 216
Query: 263 PKGCEPNVWIYNSLMDMH---GRAKNLRQLEKYTTVISAYNM---AREFDMCVKFYNEFR 316
G P Y ++M + GR +++++ K T + + AR +++ + Y +
Sbjct: 217 TTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGK-- 274
Query: 317 MNGGVIDRAMA 327
G +++AM+
Sbjct: 275 --QGKVEQAMS 283
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 20/231 (8%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ LC +GK +AF+++K +M KG + D S Y+ +I +V+ A LF+E +
Sbjct: 196 RCLC-GVGKFDKAFQLIK---EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 251
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ D+ + L+ + + G++E+ + E M++ + + +++ + K +
Sbjct: 252 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 311
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM----------------Q 227
A ++ +++ GC P VTY ++++ C+ G SKA +V+ ++
Sbjct: 312 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 371
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ VV Y ++V K ++ A L+ M GCEPN +Y++L+D
Sbjct: 372 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 422
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 133/324 (41%), Gaps = 56/324 (17%)
Query: 35 IGDSEKVAA-LFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
IG S+ + + CE R L P+ Y L D L K+ + + M G
Sbjct: 355 IGTSDSADSDFYFPCEDRH-TLAPNVV-TYGALVDGLCKAHKVDHAHELLDAMLSSGCEP 412
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ VY +LI F ++ A+E+F + + G L + + L+ ++G ++
Sbjct: 413 NHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD------ 466
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
A+KV Q++ C P VTY ++I+ CRI
Sbjct: 467 -----------------------------LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 497
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G KA K+ M++KG VV Y++++ GK G+I ++ L +M KGC PN Y
Sbjct: 498 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 557
Query: 274 NSLMD------MHGRAKNL----------RQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
L++ + +A+ L + L+ Y I + ++ F + E
Sbjct: 558 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMES 615
Query: 318 NGGVIDRAMAGIMVGVFSKLSQIE 341
G V + G+++ FSK ++E
Sbjct: 616 YGTVPIAPVYGMLIDCFSKAGRLE 639
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 125/353 (35%), Gaps = 97/353 (27%)
Query: 8 HYYEKMKSAGIVLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
H +E + + +L SGC Y +++ F K G + +FL+ K PS H
Sbjct: 397 HAHELLDA---MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ--MTKCGYLPS-VH 450
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D + K GR +K M + + Y ++I I E + A +L
Sbjct: 451 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 510
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
EEKG ++ + L+ +G K
Sbjct: 511 EEKGCSPNVVTYTALI-----------------------------------DGLGKAGKI 535
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ------------- 228
++ ++ Q+ +GC P VTY +IN C GL KA + EM+Q
Sbjct: 536 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 595
Query: 229 -KGFDKCVVA-------------------YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+GF K +A Y ++ + K GR+ AM L
Sbjct: 596 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMEL----------- 644
Query: 269 NVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
+ +M++ K + Y ++I A +A + + + Y+E G V
Sbjct: 645 ----HKEMMEVPSSVKTDNDM--YASLIQALCLASQVEEAFRLYSEMTRRGFV 691
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 131/355 (36%), Gaps = 34/355 (9%)
Query: 13 MKSAGIVLDS---GCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
M +G +D GC+ + + D A +E E KLD T THM
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWAD----ALDMIEREDFKLD-TVLCTHMIS----G 51
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++ E + F M+ + + Y +L+ F ++ + + +G +
Sbjct: 52 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 111
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA------ 183
+F LV Y E +++ M + + + + +
Sbjct: 112 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDL 171
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K+Y ++++ C+ +V A+ C +G + KA ++ EM +KGF YS ++
Sbjct: 172 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 231
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------- 290
++ A L +MK G P+V+ Y L+D +A + Q +
Sbjct: 232 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 291
Query: 291 ---KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I AY A++ ++ G + G +V K I +
Sbjct: 292 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK 346
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKE--KGILEDPSVYASLICSFASIAEVKVAEELFK 119
+Y +L D K+GR ++ ++M E + D +YASLI + ++V+ A L+
Sbjct: 624 VYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYS 683
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
E +G + +L VF+ L+ +G+VE
Sbjct: 684 EMTRRGFVPELSVFVCLI-----KGLVE 706
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 114/224 (50%), Gaps = 6/224 (2%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+GK AF +++ +M ++ D Y I + SI + AE++F+ EKG D
Sbjct: 259 MGKVEEAFAVME---EMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPD 315
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ + +EG + V+ M A + + I +I++GF K A+++Y+
Sbjct: 316 MHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQ 375
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGK 247
+++ G +P VTY ++INA C++ +A ++ EMQ++ + +V YS ++ GK
Sbjct: 376 RILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGK 435
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-MHGRAKNLRQLE 290
G A L+A+M G P+ + Y SL+ + G K R +E
Sbjct: 436 VGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAME 479
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 4/277 (1%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
DS Y I++ +K G+ + + + + K + T + Y +L D L K+ +
Sbjct: 105 DSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLT---YTVLVDGLCKAHKVERAC 161
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
F +M KG D Y+SLI + V A +L +G + +V
Sbjct: 162 DVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGL 221
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ G +++ ++ ++ M+ L IV G+ A V E++ + C P
Sbjct: 222 CKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDT 281
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
++Y I A IG +AEKVF M +KG + Y ++ + K G + A ++
Sbjct: 282 ISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRL 341
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKYTTVI 296
M +PN +IY +MD ++ L + LE Y ++
Sbjct: 342 MDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRIL 378
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 113/268 (42%), Gaps = 6/268 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M D+ Y +EA Y IG E+ +F E+ H Y I+ D+
Sbjct: 270 EEMADRDCAPDTISYTMFIEALYSIGRREEAEKVF---ETMVEKGCKPDMHTYGIIIDNF 326
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G R M + + + +Y ++ F + ++ A EL++ + G+L
Sbjct: 327 CKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPST 386
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ ++ + +++ LE++ M + EL S +I++G K A +
Sbjct: 387 VTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLL 446
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++I G IP TY S+I G S+A ++ EM + G Y ++V + ++
Sbjct: 447 AEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS 506
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+ A L+ +M G PN + + ++
Sbjct: 507 D-VDAAWDLLQEMMRNGHTPNEFTFKAV 533
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L Y+++ GI+ + Y ++ A K+ ++ L E + RK +L PS Y
Sbjct: 368 EEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIV-TY 426
Query: 64 KILCDSLGKSG---RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
++ LGK G RAF++L +M + G++ D Y SLI + A +V A EL +E
Sbjct: 427 SMIIHGLGKVGMEERAFDLLA---EMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEE 483
Query: 121 AEEKGMLRDLEVFLKLV 137
+ G+ D + LV
Sbjct: 484 MLKAGIFPDDHTYGTLV 500
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 100/226 (44%), Gaps = 12/226 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M G D Y I++ F K G AA + K + P+ ++Y ++ D
Sbjct: 304 FETMVEKGCKPDMHTYGIIIDNFCKEG--SMAAATHVLRLMDKAAVKPNR-YIYTMIMDG 360
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KS R E L+ ++ + + GIL Y ++I + + ++ A EL +E + + +
Sbjct: 361 FVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRK--EE 418
Query: 130 LEVFLKLVLMYIEE----GMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAA 184
LE + M I GM E+ +++ M + + I DC + ++ + A
Sbjct: 419 LEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGV-IPDCFTYTSLIQTLAGAGKVSRA 477
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+++ E+++ G P TY +++ CR + A + EM + G
Sbjct: 478 MELLEEMLKAGIFPDDHTYGTLVQILCRSDV-DAAWDLLQEMMRNG 522
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 42/168 (25%)
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC-------IPGQVTYA 204
++ MK + + VI++ RR AV + + C P VTY
Sbjct: 51 LLREMKARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYT 110
Query: 205 SIINAYCRIGLYS-----------------------------KAEK------VFIEMQQK 229
+I++ + G Y KA K VF EM +K
Sbjct: 111 AIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRK 170
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G ++AYSS++ K GR+ +A +LV M +G P Y S++
Sbjct: 171 GHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIV 218
>gi|15222491|ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332195999|gb|AEE34120.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 257
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%)
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D L K G F +M EKGI + Y +I SF A++L + EK +
Sbjct: 18 DRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQIN 77
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ F L+ +++E V + E+ + M + + +++GF K+ A ++
Sbjct: 78 PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM 137
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ + S+GC P VT++++IN YC+ ++F EM ++G V Y++++ + +
Sbjct: 138 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 197
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G + A L+ +M G P+ ++ ++ K LR+
Sbjct: 198 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 238
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 93/200 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + DS SGR + + R M EK I D +++LI +F +V AEE++KE
Sbjct: 48 YNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML 107
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ + ++ + ++ V+ +++SM + + ++NG+ K +
Sbjct: 108 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 167
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++++ ++ +G + VTY ++I+ +C++G A+ + EM G + + M+
Sbjct: 168 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 227
Query: 243 AMYGKTGRIRDAMRLVAKMK 262
A +R A ++ ++
Sbjct: 228 AGLCSKKELRKAFAILEDLQ 247
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+++ F + A ++ +I + P VT++++INA+ + S+AE+++ EM +
Sbjct: 51 MIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWS 110
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR--- 287
+ Y+SM+ + K R+ DA R++ M KGC P+V +++L++ + +AK +
Sbjct: 111 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 170
Query: 288 -------------QLEKYTTVISAYNMAREFDMCVKFYNE 314
YTT+I + + D NE
Sbjct: 171 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNE 210
>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 706
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 2/218 (0%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L +L K G A E + F +M D S++ S + + A +L +
Sbjct: 216 IYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGDRDACLSMLESLCNAGKTVEAIDLLGKI 275
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRA 180
EKG+ D ++ + + ++ E MK + + D + ++++ F +
Sbjct: 276 HEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMK-LDGPLPDIFTYNILISSFGRAGK 334
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ A+K++E+L + C P ++Y S+IN + G +A F EMQ+KG + VV YS+
Sbjct: 335 VYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYST 394
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +GKT ++ A RL +M +GC PN+ YN L+D
Sbjct: 395 LIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLD 432
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 109/228 (47%), Gaps = 11/228 (4%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+ +SL +G+ E + + EKGI D +Y ++ + + ++ +L+++ + G
Sbjct: 255 MLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDG 314
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI-----VNGFSKRRA 180
L D+ + L+ + G V + +++ E ++N SDC +I +N K
Sbjct: 315 PLPDIFTYNILISSFGRAGKVYEAIKIFEELEN-----SDCKPDIISYNSLINCLGKNGD 369
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A + ++ +G P VTY+++I + + A ++F EM +G +V Y+
Sbjct: 370 LDEAHIRFREMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNI 429
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH-GRAKNLR 287
++ ++GR +A+ L AK+K +G P+ Y+ L + G + LR
Sbjct: 430 LLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYSVLERLQSGSHRKLR 477
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 38/239 (15%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
K+ GI D+ Y + F +G ++++ L+ E KLD Y IL S G
Sbjct: 274 KIHEKGINTDTIMYNTV---FTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFG 330
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
++G+ +E +K F +++ D Y SLI ++ A F+E +EKG+ D+
Sbjct: 331 RAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVV 390
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ S I C F K A ++++++
Sbjct: 391 TY------------------------------STLIEC-----FGKTDKVEMACRLFDEM 415
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+++GC P VTY +++ R G ++A ++ +++Q+G + YS + + + R
Sbjct: 416 LAEGCFPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYSVLERLQSGSHR 474
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 136/319 (42%), Gaps = 33/319 (10%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+++A+ + DS+ ++LE + + L + +L D+L K + + K F DMK
Sbjct: 48 LVQAYLRSCDSDNGFRVYLEMKRKGYTL---DIFAFNMLLDALAKDQKVDQAFKVFEDMK 104
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+K D Y +I I ++ + LF+E KG +L + ++ MV+
Sbjct: 105 KKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVD 164
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
KT+ + M ++ VI+ + KV E +S+ + + YA ++
Sbjct: 165 KTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQLHKLDKVVE--LSRKYMNRSI-YAYLV 221
Query: 208 NAYCRIGLYSKAEKVFIEM---QQKG-FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
++G S+A ++F M +G D C+ SM+ G+ +A+ L+ K+
Sbjct: 222 RTLNKLGHASEAHRLFCNMWSYHDRGDRDACL----SMLESLCNAGKTVEAIDLLGKIHE 277
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
KG + +YN++ GR K + L +D+ Y + +++G + D
Sbjct: 278 KGINTDTIMYNTVFTALGRLKQISHL---------------YDL----YEKMKLDGPLPD 318
Query: 324 RAMAGIMVGVFSKLSQIEE 342
I++ F + ++ E
Sbjct: 319 IFTYNILISSFGRAGKVYE 337
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 132/349 (37%), Gaps = 70/349 (20%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
+S + Y +MK G LD + +++A K +KV F E K +
Sbjct: 57 DSDNGFRVYLEMKRKGYTLDIFAFNMLLDALAK---DQKVDQAFKVFEDMKKKHCEPDEY 113
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y I+ G+ G+ E L F +M KG + Y ++I + A+ V LF +
Sbjct: 114 TYTIMIRMTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKM 173
Query: 122 EEK-------------------GMLRDLEVFLKL-------------------------- 136
EK G L L+ ++L
Sbjct: 174 MEKNCRPNEFTYSVILTLLAAEGQLHKLDKVVELSRKYMNRSIYAYLVRTLNKLGHASEA 233
Query: 137 ------VLMYIEEGMVEKTLEVVESMKNAE----------------LNISDCISCVIVNG 174
+ Y + G + L ++ES+ NA +N + +
Sbjct: 234 HRLFCNMWSYHDRGDRDACLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTA 293
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+ + +YE++ G +P TY +I+++ R G +A K+F E++
Sbjct: 294 LGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPD 353
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+++Y+S++ GK G + +A +M+ KG P+V Y++L++ G+
Sbjct: 354 IISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTLIECFGKT 402
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY ++ AY R +V++EM++KG+ + A++ ++ K ++ A ++ M
Sbjct: 44 TYKCLVQAYLRSCDSDNGFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDM 103
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
K K CEP+ + Y ++ M GR L +
Sbjct: 104 KKKHCEPDEYTYTIMIRMTGRIGKLDE 130
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 3/231 (1%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G+ RAF++ F+ M+++GI D Y++LI + + + +LF +A KG+ D+
Sbjct: 300 GEMDRAFDL---FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
VF + +Y++ G + V + M ++ + +++ G + + A +Y Q
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ +G P VTY+S+I+ +C+ G ++ +M + G+ VV Y +V K G
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ AMR KM + NV ++NSL+D R + K ++ Y +
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 107/234 (45%), Gaps = 1/234 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+ PS + + D+L G + L F R + E+G V + + S+ +++VA
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERG-FRVGIVSCNKVLKGLSVDQIEVA 270
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
L + G ++ F L+ + + G +++ ++ + M+ + +++G
Sbjct: 271 SRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG 330
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+ K K++ Q + +G V ++S I+ Y + G + A V+ M +G
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPN 390
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
VV Y+ ++ + GRI +A + ++ +G EP++ Y+SL+D + NLR
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 118/273 (43%), Gaps = 3/273 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L + +M G+ D+ YC +++AF K LF + K+ + +
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKIS---ADIAVC 604
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ L K R + KFF ++ E + D Y ++IC + S+ + AE +F+ +
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ L+ + + ++ + + M + +++ FSK
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+ K++E++ +G P V+Y+ II+ C+ G +A +F + VVAY+ ++
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
Y K GR+ +A L M G +P+ + +L
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 122/318 (38%), Gaps = 44/318 (13%)
Query: 10 YEKMKSAGIVLDSG------CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
YE G +L G Y +++ F K G+ AL+ + P +Y
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY---PPDVVIY 464
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+L D L K G ++F M + I + V+ SLI + + A ++F+
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK------ 177
G+ D+ F ++ + I EG +E+ L + M L C +++ F K
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI 584
Query: 178 ---------RRAYWA--------------------AVKVYEQLISQGCIPGQVTYASIIN 208
R A A K + LI P VTY ++I
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
YC + +AE++F ++ F V + ++ + K + A+R+ + M KG +P
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 269 NVWIYNSLMDMHGRAKNL 286
N Y LMD ++ ++
Sbjct: 705 NAVTYGCLMDWFSKSVDI 722
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 112/264 (42%), Gaps = 42/264 (15%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILCDSLGKSG 74
G+ LD + ++ + K GD + ++ + C+ ++P+ Y IL L + G
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG----ISPNVV-TYTILIKGLCQDG 405
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
R +E + + ++G+ Y+SLI F ++ L+++ + G D+ ++
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY- 464
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
V+V+G SK+ A++ +++ Q
Sbjct: 465 ----------------------------------GVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
V + S+I+ +CR+ + +A KVF M G V +++++ + GR+ +A
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMD 278
+ L +M G EP+ Y +L+D
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLID 574
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 112/271 (41%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + M GI D + +M G E+ ALFL K+ L P + Y L
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE--ALFLFFRMFKMGLEPDAL-AYCTL 572
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K + L+ F M+ I D +V +I ++ A + F E M
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + ++ Y +++ + E +K + ++++ K A++
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ + +G P VTY +++ + + + K+F EMQ+KG +V+YS ++
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K GR+ +A + + P+V Y L+
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%)
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
GR E L F M + G+ D Y +LI +F + + +LF + + D+ V
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 604
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ + + +E + ++ ++ ++ G+ R A +++E L
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
P VT +I+ C+ A ++F M +KG V Y ++ + K+ I
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +L +M+ KG P++ Y+ ++D
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIID 749
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 136/302 (45%), Gaps = 10/302 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y ++ + V Y +++A+ G E+ + +E ++ + +Y +
Sbjct: 200 YVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEG 259
Query: 70 LGK-SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K G E + F+ MK Y +I + ++ ++ +L+ E
Sbjct: 260 LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP 319
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + LV + EG+ EK E+ E ++ L + ++ +S+ + A +++
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 379
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ GC P + +Y +++AY R GL+S AE VF EM++ G + ++ +++ Y K
Sbjct: 380 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 439
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY---------TTVISAY 299
+ +V +M G EP+ ++ NS+++++GR ++EK T IS Y
Sbjct: 440 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 499
Query: 300 NM 301
N+
Sbjct: 500 NI 501
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 135/313 (43%), Gaps = 55/313 (17%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
+++ D + LI ++ + K AE L+ + E + + + L+ Y G+
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 146 VEKTLEVVESMKNAEL----------------------NISDCISC-------------- 169
+E+ V+ M+N + N + I
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 170 ---VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
+++N + K + + K+Y ++ S C P TY +++NA+ R GL KAE++F ++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA--- 283
Q+ G + V Y++++ Y + G A + + M+ GCEP+ YN ++D +GRA
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 284 -------KNLRQL------EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIM 330
+ +++L + + ++SAY+ AR+ C E NG D + M
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 467
Query: 331 VGVFSKLSQIEEL 343
+ ++ +L Q ++
Sbjct: 468 LNLYGRLGQFTKM 480
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 142/342 (41%), Gaps = 22/342 (6%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N++ + +++MK + Y ++ + K S L+ CE R P+
Sbjct: 266 NTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLY--CEMRSHQCKPNIC- 322
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L ++ + G + + F ++E G+ D VY +L+ S++ A E+F
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G D + +V Y G+ V E MK + + ++++ +SK R
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ +++ G P S++N Y R+G ++K EK+ EM+ + Y+ +
Sbjct: 443 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 502
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ +YGK G + L ++K K P+V +T+ I AY+
Sbjct: 503 INIYGKAGFLERIEELFVELKEKNFRPDV-------------------VTWTSRIGAYSR 543
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ + C++ + E +G D A +++ S Q+E++
Sbjct: 544 KKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 585
>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 426
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 146/303 (48%), Gaps = 19/303 (6%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R+ L+P + Y L GK G + L + + M+E + D +Y++LI + +
Sbjct: 1 RERALSPDR-YTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCD 59
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-C 169
A +F + G+ DL + ++ ++ + + + +V M+ A + + D +S C
Sbjct: 60 YSRAISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGV-MPDTVSYC 118
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++ + + + + A+ ++ ++ C T +I+ Y ++G+ +A+K+F M++
Sbjct: 119 TLLTMYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKM 178
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------RA 283
G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G +A
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKA 238
Query: 284 KNL------RQLEK----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
NL R +E Y+T+IS + + D + + R +G ID+ + M+
Sbjct: 239 NNLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVA 298
Query: 334 FSK 336
+ +
Sbjct: 299 YER 301
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 124/277 (44%), Gaps = 3/277 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +KM+ + D Y ++E K+ D + ++F ++ + P Y +
Sbjct: 29 LSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRAISIF--SRLKRSGIAPDLV-AYNSM 85
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ GK+ E +M+ G++ D Y +L+ + + A LF E E
Sbjct: 86 INVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTMYVENQKFLEALSLFSEMREIQC 145
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
DL ++ +Y + GM ++ ++ SM+ + + ++ + + A+
Sbjct: 146 SFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ + + VTY S++ Y + + KA + EMQ +G + + YS++++++G
Sbjct: 206 LFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEMQDRGIEPNAITYSTIISIWG 265
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
K G++ A L K++ G E + +Y +++ + RA
Sbjct: 266 KVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYERA 302
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 139/296 (46%), Gaps = 21/296 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL----DLTPSSTHMYKILC 67
+M++AG++ D+ YC ++ + + + + + AL L E R++ DLT + I+
Sbjct: 104 EMRTAGVMPDTVSYCTLLTMY--VENQKFLEALSLFSEMREIQCSFDLTTCN-----IMI 156
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D G+ G A E K F M++ GI + Y +L+ + A LF+ + K +
Sbjct: 157 DVYGQLGMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 216
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+++ + ++++Y + EK +++ M++ + + I++ + K A +
Sbjct: 217 QNVVTYNSMMVIYGKTLEHEKANNLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAML 276
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++L G QV Y ++I AY R GL + A+++ E+++ + + + +
Sbjct: 277 FQKLRCSGIEIDQVLYQTMIVAYERAGLVAHAKRLLQELKRPD----NIPRDTAIHILAG 332
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
GRI +A + + G ++ ++ ++++ + K KY V+ ++ R
Sbjct: 333 AGRIEEATWVFRQAVEAGEVKDITVFERMINLFSKHK------KYPNVVEVFDKMR 382
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 48/223 (21%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILCD 68
++M+ GI ++ Y I+ + K+G ++ A LF L C ++D +Y+ +
Sbjct: 243 QEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQV-----LYQTMIV 297
Query: 69 SLGKSGRAFEILKFFRDMKEK-GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ ++G + +++K I D +++ A ++ A +F++A E G +
Sbjct: 298 AYERAGLVAHAKRLLQELKRPDNIPRDTAIHI-----LAGAGRIEEATWVFRQAVEAGEV 352
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+D+ VF ++ +N FSK + Y V+V
Sbjct: 353 KDITVFERM-----------------------------------INLFSKHKKYPNVVEV 377
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++++ G P A ++NAY ++ + KA V++EMQ +G
Sbjct: 378 FDKMRGLGYFPHSNVIALVLNAYGKLHEFDKANSVYMEMQDEG 420
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 190 QLISQGCIPGQ-VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
Q + + +PG V Y+++I ++ YS+A +F +++ G +VAY+SM+ ++GK
Sbjct: 33 QKMEEDRVPGDLVLYSNLIELSRKLCDYSRAISIFSRLKRSGIAPDLVAYNSMINVFGKA 92
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
R+A LV++M+ G P+ Y +L+ M+ +N + LE
Sbjct: 93 KLFREARALVSEMRTAGVMPDTVSYCTLLTMY--VENQKFLE-----------------A 133
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ ++E R D IM+ V+ +L +E
Sbjct: 134 LSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKE 167
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 89/191 (46%), Gaps = 14/191 (7%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
++M+++GI + Y+++I + + ++ A LF++ G+ D ++ +++ Y
Sbjct: 240 NLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAY 299
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-RRAYWAAVKVYEQLISQGCIPG 199
G+V +++ +K + NI + I+ G + A W V+ Q + G +
Sbjct: 300 ERAGLVAHAKRLLQELKRPD-NIPRDTAIHILAGAGRIEEATW----VFRQAVEAGEVKD 354
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM----YGKTGRIRDAM 255
+ +IN + + Y +VF +M+ G+ +S+++A+ YGK A
Sbjct: 355 ITVFERMINLFSKHKKYPNVVEVFDKMRGLGY----FPHSNVIALVLNAYGKLHEFDKAN 410
Query: 256 RLVAKMKPKGC 266
+ +M+ +GC
Sbjct: 411 SVYMEMQDEGC 421
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 5/217 (2%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K GR I K + M E G+ +D + LI +F + +V A E+ +++ E G+
Sbjct: 202 KFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPC 261
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F KL+ + +E + LE+V +M N I+NGF K A +V+
Sbjct: 262 NDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFN 321
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L +G P V Y ++I+ +C++G A K++ EM KGF +Y++++ + K G
Sbjct: 322 ALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIG 381
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRA 283
+ +AM+L KM G + N+L + +HGR
Sbjct: 382 NLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRT 418
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 97/208 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y+ + + K+ + + F +K++G D +Y +LI F + +++ A +L+ E
Sbjct: 300 YQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMI 359
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+KG L + + L+ + + G +++ +++ + M ++ + ++ G
Sbjct: 360 DKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTD 419
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + ++ + + +TY ++I +CR G ++ + E+Q KG +Y+ ++
Sbjct: 420 EAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLI 479
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ G +++A + M +G +P V
Sbjct: 480 QKLCQLGSVQEAKEMWNDMHNRGLQPMV 507
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
MY L K G+ + K + +M +KG L + Y +LI F I + A +L+K+
Sbjct: 334 MYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKM 393
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRA 180
+ G L+L G ++ + M + + D I+ ++ GF +
Sbjct: 394 LDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNI-VCDVITYNTLIQGFCREGK 452
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ + ++L ++G P +YA +I C++G +A++++ +M +G V
Sbjct: 453 VLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDH 512
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+++ + G + + M + M +P
Sbjct: 513 IISGLCEQGYVVEGMEWLITMLKSNLKP 540
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
LTP + K++ K +L+ M K D Y +I F A
Sbjct: 258 LTPCNDAFNKLI-SGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQA 316
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
E+F +++G D+ ++ L+ + + G +E ++ M + ++ ++ G
Sbjct: 317 FEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYG 376
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K A+K+Y++++ G ++ ++I C G +A F EM K
Sbjct: 377 FCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCD 436
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V+ Y++++ + + G++ + L+ +++ KG +P+ Y L+
Sbjct: 437 VITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLI 479
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 7/211 (3%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY- 63
SKL + +M G + + Y ++ F KIG+ ++ L+ + LD T +
Sbjct: 352 SKLWF--EMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLY----KKMLDSGYKETTLSC 405
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L L GR E FFR+M K I+ D Y +LI F +V + +L KE +
Sbjct: 406 NTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQA 465
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ + L+ + G V++ E+ M N L C I++G ++
Sbjct: 466 KGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVE 525
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
++ ++ P + T+ +I + +IG
Sbjct: 526 GMEWLITMLKSNLKPQKETFYKLIQSLIQIG 556
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 134/277 (48%), Gaps = 5/277 (1%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E K L P +++ L D+L K+G E K F DM+EK + + SL+ +
Sbjct: 192 EMPKYGLEPDE-YVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCRE 249
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDC 166
++ A+E+ + +E G+ D+ VF L+ Y G + +++ M+ E N+ +C
Sbjct: 250 GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV-NC 308
Query: 167 ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
+ +I + A++V+ ++ GC VTY ++I+ +C+ G+ K V +M
Sbjct: 309 YTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM 368
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
++KG V Y ++ + K + + + L+ KMK +GC P++ IYN ++ + + +
Sbjct: 369 RKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEV 428
Query: 287 RQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
++ + + A ++ D V N F G +I+
Sbjct: 429 KEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIE 465
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 152 VVESMK--NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
++E M+ N EL I + V++ F+ AV+V +++ G P + + +++A
Sbjct: 153 LIEEMRKTNPEL-IEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDA 211
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
C+ G +A KVF +M++K F + ++S++ + + G++ +A ++ +MK G EP+
Sbjct: 212 LCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPD 270
Query: 270 VWIYNSLMDMHGRA 283
+ ++ +L+ + A
Sbjct: 271 IVVFTNLLSGYAHA 284
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 102/222 (45%), Gaps = 6/222 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF-LECESRKLDLTPSSTHMYKILCDSL 70
+MK AG+ D + ++ + G K+A + L + RK P+ + Y +L +L
Sbjct: 261 QMKEAGLEPDIVVFTNLLSGYAHAG---KMADAYDLMNDMRKRGFEPN-VNCYTVLIQAL 316
Query: 71 GKS-GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++ R E ++ F +M+ G D Y +LI F + + + +KG++
Sbjct: 317 CRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS 376
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++++++ + ++ E+ LE++E MK + I V++ K AV+++
Sbjct: 377 QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWN 436
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ + G PG T+ +IN + G +A F EM +G
Sbjct: 437 EMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 4/196 (2%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE-VKVAEELFKEAEEKGMLRD 129
GK A++++ DM+++G + + Y LI + + + A +F E E G D
Sbjct: 285 GKMADAYDLMN---DMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + GM++K V++ M+ + S I+ K+ + +++ E
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIE 401
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +GC P + Y +I C++G +A +++ EM+ G V + M+ + G
Sbjct: 402 KMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
Query: 250 RIRDAMRLVAKMKPKG 265
+ +A +M +G
Sbjct: 462 FLIEACNHFKEMVSRG 477
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 141/335 (42%), Gaps = 23/335 (6%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H ++M G+ D Y +++A+ + G E L E E+ + PSS +IL
Sbjct: 325 HVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILA 382
Query: 68 D--SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
G +AF +L R+M G+ D Y +I +F + A ++F +G
Sbjct: 383 GFRDRGDWQKAFAVL---REMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEG 439
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D+ + L+ + + G + +E+ + M+ + +++N ++ +
Sbjct: 440 IEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVE 499
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ ++ QG +P +TY ++++ Y R G Y +A M+ G Y ++V Y
Sbjct: 500 TMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY 559
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------RAKNLRQLEK-------- 291
+ G A+ +V M+ G E + + NSL++ G A ++ Q K
Sbjct: 560 AQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDV 619
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
YTT++ A +FD Y E +G DR
Sbjct: 620 ITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 654
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 141/333 (42%), Gaps = 74/333 (22%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFE-- 78
D+ + ++ AF + + AAL L ++ + LTP S + L +LG +GR E
Sbjct: 232 DAPLFSDLISAFARAALPD--AALELLASAQAIGLTPRSNAV-TALISALGIAGRVPEAE 288
Query: 79 --ILKFF--------------------------------RDMKEKGILEDPSVYASLICS 104
L+FF +M E G+ D + Y+ L+ +
Sbjct: 289 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDA 348
Query: 105 FASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS 164
+ + A L KE E G+ VF +++ + + G +K V+ M + +
Sbjct: 349 YTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPD 408
Query: 165 DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF- 223
V+++ F K A+ V+ ++ +G P VT+ ++I+A+C+ G + A ++F
Sbjct: 409 RHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFK 468
Query: 224 ----------------------------------IEMQQKGFDKCVVAYSSMVAMYGKTG 249
EM+++G ++ Y+++V +YG++G
Sbjct: 469 EMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSG 528
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
R ++A+ + MK G +P+ +Y++L++ + +
Sbjct: 529 RYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 561
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 4/202 (1%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASI---AEVKVAEELFKEAEEKGMLRDLEVFLKL 136
L+ ++E L D + Y+ L+ S + + + E L + + + D +F L
Sbjct: 180 LRLLALIREHNFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDL 239
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNI-SDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
+ + + + LE++ S + L S+ ++ +I R A E ++
Sbjct: 240 ISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGE 299
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
P Y +++ Y +IG AE V EM + G YS +V Y + GR A
Sbjct: 300 IKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESAR 359
Query: 256 RLVAKMKPKGCEPNVWIYNSLM 277
L+ +M+ G +P+ ++++ ++
Sbjct: 360 ILLKEMEADGVKPSSYVFSRIL 381
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 38/235 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ GI D + +++A K G + LF E P T Y I+ +
Sbjct: 432 FNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESN---CPPGTTTYNIMINL 488
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ R + +MKE+G++ + Y +L+ + K A + + + G+
Sbjct: 489 LGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPS 548
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR---------- 179
++ LV Y + G+ + L VV++M+ L S + ++N F + R
Sbjct: 549 PTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQ 608
Query: 180 ------------AYWAAVK-------------VYEQLISQGCIPGQVTYASIINA 209
Y +K +YE++I+ GC P + A + +A
Sbjct: 609 FMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSA 663
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 99/234 (42%), Gaps = 20/234 (8%)
Query: 123 EKGMLRDLEVFLKLV--LMYIEEGMVEKTLE-VVESMKNAELNISDCISCVIVNGFSKRR 179
E L DL + L+ L+ + LE ++ ++++ L + +++ F++
Sbjct: 188 EHNFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDLISAFARAA 247
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV-AY 238
AA+++ + G P ++I+A G +AE +F+E G K AY
Sbjct: 248 LPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAY 307
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLEK 291
++++ Y K G +++A ++ +M G P+ Y+ L+D + RA L+++E
Sbjct: 308 NALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEA 367
Query: 292 YTTVISAYNMAR---------EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
S+Y +R ++ E +G DR +M+ F K
Sbjct: 368 DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGK 421
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 7/272 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y I+ + + G++ + AL E K P++ +Y I+ L K G+ E L
Sbjct: 1700 YSTIVRGYCEDGETRQALALL---EHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLH 1756
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M D Y LI + + ++ A+ L + + + D+ + L+ +G
Sbjct: 1757 SMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKG 1816
Query: 145 ----MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
VE+ + E M + + V+++ + + A KV + + GC
Sbjct: 1817 NGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDL 1876
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY +IN + + G+ KA +F+EM +G VV Y+S+V + K G++ +A +L A+
Sbjct: 1877 VTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAE 1936
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
MK +G PN Y S+ D +A ++ Y
Sbjct: 1937 MKARGIFPNGRTYTSITDACLKAGRMQDAHAY 1968
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 124/288 (43%), Gaps = 18/288 (6%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L M + D Y ++ A K+G E L ++R+ P+ Y L
Sbjct: 1752 LDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARE---CPTDIVTYNTL 1808
Query: 67 CDSLGKSG----RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
L + G R + F +M +KG Y +I + + + A+++
Sbjct: 1809 IHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMH 1868
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSK 177
E G DL + L+ + + GM++K +++ E+ CI V IV+GF K
Sbjct: 1869 ENGCAFDLVTYNMLINRFAKAGMMDKAMDLF-----VEMPTRGCIPDVVTYNSIVDGFCK 1923
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A K++ ++ ++G P TY SI +A + G A +EM+++G ++
Sbjct: 1924 AGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVD-AIS 1982
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
Y ++++ K G+ + +L+ +M KG +PN+ +N + + + N
Sbjct: 1983 YVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESN 2030
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 7/267 (2%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
++ L E MK A + ++ Y I+ K G ++ L S +
Sbjct: 1713 TRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLL---HSMATTSCAPDIYT 1769
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE----VKVAEELF 118
Y IL ++L K GR + M+ + D Y +LI V+ A LF
Sbjct: 1770 YNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLF 1829
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E +KG + ++ + M E+ +V++ M +++N F+K
Sbjct: 1830 EEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKA 1889
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A+ ++ ++ ++GCIP VTY SI++ +C+ G +A K+F EM+ +G Y
Sbjct: 1890 GMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRTY 1949
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+S+ K GR++DA + +M+ +G
Sbjct: 1950 TSITDACLKAGRMQDAHAYLVEMRKEG 1976
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 20/246 (8%)
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L E++ + + +V Y E+G + L ++E MK AE+ + + +I+
Sbjct: 1684 LIAESKPSSFQANAFTYSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLC 1743
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A+ + + + C P TY +INA C++G A+ + MQ + +V
Sbjct: 1744 KHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIV 1803
Query: 237 AYSSMVAMYGKTG----RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK- 291
Y++++ + G R+ A RL +M KG P Y ++D R K Q +K
Sbjct: 1804 TYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKV 1863
Query: 292 ---------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
Y +I+ + A D + + E G + D +V F K
Sbjct: 1864 LDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCK 1923
Query: 337 LSQIEE 342
++EE
Sbjct: 1924 AGKVEE 1929
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 119/273 (43%), Gaps = 4/273 (1%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D Y +M + K+ + + LF + ++ ++ S Y L D L +SG
Sbjct: 409 DVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNIN---PSIVTYNTLIDGLCESGNLEGAQ 465
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ +M + I D Y +L+ F + +A E++ E KG+ D + +
Sbjct: 466 RLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGE 525
Query: 141 IEEGMVEKTLEVVESMKNAELNISD-CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G EK + E M + + D I V ++G K A++ ++ G +P
Sbjct: 526 LRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPD 585
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY ++I Y G + A ++ EM K V+ Y ++ + K GR+ A +
Sbjct: 586 HVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYST 645
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+MK +G PNV +N+L+ +A N+ + +Y
Sbjct: 646 EMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRY 678
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 9/267 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE M GI+ + ++++ +K GD E+V ++LE + R ++ + + Y IL +
Sbjct: 262 YETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVT---YNILING 318
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KSG+ E +F DM+ G P + LI + A + E G+
Sbjct: 319 FSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPT 378
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY 188
+ + E G ++ E++ SM D +S +++G+ K R + A ++
Sbjct: 379 TSTYNIYIRALCEFGRIDDARELLSSMA-----APDVVSYNTLMHGYIKMRKFVEASLLF 433
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ L + P VTY ++I+ C G A+++ EM + V+ Y++++ + K
Sbjct: 434 DDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKN 493
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNS 275
G + A + +M KG +P+ + Y +
Sbjct: 494 GNLSMATEIYDEMLRKGIKPDGYAYTT 520
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A+E+++ G++ + F ++ + G +E+ ++ MK + S+ +++N
Sbjct: 258 AQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILIN 317
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
GFSK A + + + G ++ +I YC+ GL+ +A V EM G
Sbjct: 318 GFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYP 377
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
Y+ + + GRI DA L++ M P+V YN+L MHG K
Sbjct: 378 TTSTYNIYIRALCEFGRIDDARELLSSM----AAPDVVSYNTL--MHGYIK 422
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 119/249 (47%), Gaps = 3/249 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L K+GR E K F M ++G+ + + Y +L+ +A+ + L
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ + VF L+ Y ++G V++ + V M+ LN ++ K
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ +EQ+I + PG + Y S+I++ C + KA+++ +EM +G + ++S++
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+ K GR+ ++ +L M G +P++ Y++L+D + A + + K + + M
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 303 REFDMCVKF 311
+ CV +
Sbjct: 547 PD---CVTY 552
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 5/277 (1%)
Query: 3 SQSKLHYYEKMKSAG--IVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
SQ L + M G D Y ++ F+K GD +K + E R + P+
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGI--LPNVV 235
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y + +L K+ + ++ M + G++ + Y S++ + S + K A K+
Sbjct: 236 -TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G+ D+ + L+ + G + ++ +SM L ++ G++ + A
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ + ++ G P ++ +I AY + G +A VF +M+Q+G + V Y +
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ + K+GR+ DAMR +M + P +YNSL+
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 110/236 (46%), Gaps = 12/236 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL-FKEA 121
Y IL S +GR ++ +KG + D + ++ + A ++ +
Sbjct: 94 YGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRM 153
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI-----VNGFS 176
+ G + ++ + L+ ++ ++ LE+++ M + + DC V+ +NGF
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPD---DGGDCPPDVVSYTTVINGFF 210
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A Y +++ +G +P VTY+SII A C+ KA +V M + G
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQL 289
Y+S+V Y +G+ ++A+ + KM G EP+V YNSLMD +GR R++
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 5/255 (1%)
Query: 31 AFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKG 90
A+ K G ++ +F + R+ L P T Y + L KSGR + +++F M ++
Sbjct: 383 AYAKQGKVDQAMLVF--SKMRQQGLNPD-TVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 91 ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
+ VY SLI S + A+EL E ++G+ D F ++ + +EG V ++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
++ + M + +++G+ A K+ ++S G P VTY ++IN Y
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
C+I A +F EM+ G ++ Y+ ++ +T R A L + G + +
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619
Query: 271 WIYNSLMDMHGRAKN 285
YN + +HG KN
Sbjct: 620 STYNII--LHGLCKN 632
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 4/274 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + Y+E+M + + Y ++ + +K L LE R + L T +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFF 482
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ DS K GR E K F M G+ D Y++LI + ++ A +L
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
GM D + L+ Y + +E L + M+++ ++ +I+ G + R A
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++Y + G TY I++ C+ L +A ++F + ++ M+
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K GR +A L A + G P+V Y SLM
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTY-SLM 695
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 115/271 (42%), Gaps = 13/271 (4%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+M GI LD+ + I+++ K G +SEK+ L + ++ + P Y L D
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV-----RIGVKPDII-TYSTLID 522
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+G+ E K M G+ D Y +LI + I+ ++ A LF+E E G+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 129 DLEVFLKLV--LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + ++ L K L V + +L +S +I++G K A++
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS--TYNIILHGLCKNNLTDEALR 640
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ L T+ +I A ++G +A+ +F + G V YS M
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 700
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G + + L M+ GC N + NS++
Sbjct: 701 EQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 31/188 (16%)
Query: 178 RRAYWAAVKVYEQLISQGC---IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
R + AAV Y ++ G P TY ++ + C G + +KGF
Sbjct: 66 RHSPAAAVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVD 125
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVA-KMKPKGCEPNVWIYNSLM----DMHGRAKNLRQL 289
+A++ M+ R DAM +V +M GC PNV+ YN L+ D + + L L
Sbjct: 126 AIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELL 185
Query: 290 E--------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+ YTTVI+ + + D Y+E ++DR GI+ V +
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE------MLDR---GILPNVVT 236
Query: 336 KLSQIEEL 343
S I L
Sbjct: 237 YSSIIAAL 244
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%)
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D L K G F +M EKGI + Y +I SF A++L + EK +
Sbjct: 63 DRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQIN 122
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ F L+ +++E V + E+ + M + + +++GF K+ A ++
Sbjct: 123 PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM 182
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ + S+GC P VT++++IN YC+ ++F EM ++G V Y++++ + +
Sbjct: 183 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 242
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G + A L+ +M G P+ ++ ++ K LR+
Sbjct: 243 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 283
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 12/229 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKG----------ILEDPSVYASLICSFASIAEVK 112
+ L +SL + GR E L M E+G I D + +++
Sbjct: 13 FNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCKDGNHI 72
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
A+ LF E EKG+ ++ + ++ + G +++ M ++N ++
Sbjct: 73 NAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALI 132
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
N F K R A ++Y++++ P +TY S+I+ +C+ A+++ M KG
Sbjct: 133 NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCS 192
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
VV +S+++ Y K R+ + M + +M +G N Y +L +HG
Sbjct: 193 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL--IHG 239
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 113/266 (42%), Gaps = 3/266 (1%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H M + I D I++ K G+ LF E + + + Y +
Sbjct: 41 HQPNAMGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGI---FPNVLTYNCMI 97
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
DS SGR + + R M EK I D +++LI +F +V AEE++KE +
Sbjct: 98 DSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIF 157
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ ++ + ++ V+ +++SM + + ++NG+ K + +++
Sbjct: 158 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 217
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ ++ +G + VTY ++I+ +C++G A+ + EM G + + M+A
Sbjct: 218 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 277
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIY 273
+R A ++ ++ P + +
Sbjct: 278 KKELRKAFAILEDLQKSEVCPRLIFF 303
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIP---GQ-------VTYASIINAYCRIGLYSKA 219
++N + A+ + ++++ +G P GQ V +I++ C+ G + A
Sbjct: 15 TLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCKDGNHINA 74
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ +F EM +KG V+ Y+ M+ + +GR DA +L+ M K P++ +++L++
Sbjct: 75 QNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINA 134
Query: 280 HGRAKNLRQLEK 291
+ + + + E+
Sbjct: 135 FVKERKVSEAEE 146
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 13/115 (11%)
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC----------VVAYSS 240
++ GC P VT+ +++N+ CR G +A + M ++G VV ++
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEKY 292
+V K G +A L +M KG PNV YN ++D GR + QL ++
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRH 115
>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 114/234 (48%), Gaps = 3/234 (1%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G+ RAF++ F+ M+++GI D Y++LI + + + +LF +A KG+ D+
Sbjct: 300 GEMDRAFDL---FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
VF + +Y++ G + V + M ++ + +++ G + + A +Y Q
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ +G P VTY+S+I+ +C+ G ++ +M + G+ VV Y +V K G
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
+ AMR KM + NV ++NSL+D R + K ++ Y + +
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 107/234 (45%), Gaps = 1/234 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+ PS + + D+L G + L F R + E+G V + + S+ +++VA
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERG-FRVGIVSCNKVLKGLSVDQIEVA 270
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
L + G ++ F L+ + + G +++ ++ + M+ + +++G
Sbjct: 271 SRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG 330
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+ K K++ Q + +G V ++S I+ Y + G + A V+ M +G
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPN 390
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
VV Y+ ++ + GRI +A + ++ +G EP++ Y+SL+D + NLR
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 15/289 (5%)
Query: 10 YEKMKSAGIVLDSG------CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
YE G +L G Y +++ F K G+ AL+ + P +Y
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY---PPDVVIY 464
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+L D L K G ++F M + I + V+ SLI + + A ++F+
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKT------LEVVESMKNAELNISDCISCVIVNGFSK 177
G+ D+ F ++ + I E K L++ + M+ +++ + V+++ K
Sbjct: 525 YGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 584
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A K + LI P VTY ++I YC + +AE++F ++ F V
Sbjct: 585 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 644
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ ++ + K + A+R+ + M KG +PN Y LMD ++ ++
Sbjct: 645 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K R + KFF ++ E + D Y ++IC + S+ + AE +F+ + +
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+ + + ++ + + M + +++ FSK + K++E
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P V+Y+ II+ C+ G +A +F + VVAY+ ++ Y K G
Sbjct: 702 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSL 276
R+ +A L M G +P+ + +L
Sbjct: 762 RLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/283 (18%), Positives = 126/283 (44%), Gaps = 13/283 (4%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILCDSLGKSG 74
G+ LD + ++ + K GD + ++ + C+ ++P+ Y IL L + G
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG----ISPNVV-TYTILIKGLCQDG 405
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
R +E + + ++G+ Y+SLI F ++ L+++ + G D+ ++
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
LV ++G++ + M + ++ + +++G+ + + A+KV+ +
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 195 GCIPGQVTYASII------NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
G P T+ +++ +A+C+ + ++F MQ+ + + ++ + K
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
RI DA + + EP++ YN+++ + + L + E+
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 628
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 97/227 (42%), Gaps = 1/227 (0%)
Query: 52 KLDLTPSSTHM-YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
K D+ +T M I+ D+ K + L+ F M+ I D +V +I
Sbjct: 528 KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 587
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
++ A + F E M D+ + ++ Y +++ + E +K + +
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+++ K A++++ + +G P VTY +++ + + + K+F EMQ+KG
Sbjct: 648 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 707
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+V+YS ++ K GR+ +A + + P+V Y L+
Sbjct: 708 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 754
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 76/195 (38%), Gaps = 47/195 (24%)
Query: 48 CESRKLD----------LTP--SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDP 95
C R+LD +TP +T IL L K+ ++ F M EKG +
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
Y L+ F+ +++ + +LF+E +EKG I +V +
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKG---------------ISPSIVSYS------ 716
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
+I++G KR A ++ Q I +P V YA +I YC++G
Sbjct: 717 --------------IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 762
Query: 216 YSKAEKVFIEMQQKG 230
+A ++ M + G
Sbjct: 763 LVEAALLYEHMLRNG 777
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 119/249 (47%), Gaps = 3/249 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L K+GR E K F M ++G+ + + Y +L+ +A+ + L
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ + VF L+ Y ++G V++ + V M+ LN ++ K
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ +EQ+I + PG + Y S+I++ C + KA+++ +EM +G + ++S++
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+ K GR+ ++ +L M G +P++ Y++L+D + A + + K + + M
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 303 REFDMCVKF 311
+ CV +
Sbjct: 547 PD---CVTY 552
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 5/277 (1%)
Query: 3 SQSKLHYYEKMKSAG--IVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
SQ L + M G D Y ++ F+K GD +K + E R + P+
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGI--LPNVV 235
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y + +L K+ + ++ M + G++ + Y S++ + S + K A K+
Sbjct: 236 -TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G+ D+ + L+ + G + ++ +SM L ++ G++ + A
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ + ++ G P ++ +I AY + G +A VF +M+Q+G + V Y +
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ + K+GR+ DAMR +M + P +YNSL+
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVI-----VNGFSKRRAYWAAVKVYEQLISQGC 196
+E ++ LE+++ M + + DC V+ +NGF K A Y +++ +G
Sbjct: 174 DENRSQEALELLQMMPD---DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGI 230
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
+P VTY+SII A C+ KA +V M + G Y+S+V Y +G+ ++A+
Sbjct: 231 LPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIG 290
Query: 257 LVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQL 289
+ KM G EP+V YNSLMD +GR R++
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 5/255 (1%)
Query: 31 AFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKG 90
A+ K G ++ +F + R+ L P T Y + L KSGR + +++F M ++
Sbjct: 383 AYAKQGKVDQAMLVF--SKMRQQGLNPD-TVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 91 ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
+ VY SLI S + A+EL E ++G+ D F ++ + +EG V ++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
++ + M + +++G+ A K+ ++S G P VTY ++IN Y
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
C+I A +F EM+ G ++ Y+ ++ +T R A L + G + +
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619
Query: 271 WIYNSLMDMHGRAKN 285
YN + +HG KN
Sbjct: 620 STYNII--LHGLCKN 632
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 4/274 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + Y+E+M + + Y ++ + +K L LE R + L T +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFF 482
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ DS K GR E K F M G+ D Y++LI + ++ A +L
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
GM D + L+ Y + +E L + M+++ ++ +I+ G + R A
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++Y + G TY I++ C+ L +A ++F + ++ M+
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K GR +A L A + G P+V Y SLM
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTY-SLM 695
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 115/271 (42%), Gaps = 13/271 (4%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+M GI LD+ + I+++ K G +SEK+ L + ++ + P Y L D
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV-----RIGVKPDII-TYSTLID 522
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+G+ E K M G+ D Y +LI + I+ ++ A LF+E E G+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 129 DLEVFLKLV--LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + ++ L K L V + +L +S +I++G K A++
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS--TYNIILHGLCKNNLTDEALR 640
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++ L T+ +I A ++G +A+ +F + G V YS M
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 700
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G + + L M+ GC N + NS++
Sbjct: 701 EQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 31/188 (16%)
Query: 178 RRAYWAAVKVYEQLISQGC---IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
R + AAV Y ++ G P TY +I + C G + +KGF
Sbjct: 66 RHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVD 125
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVA-KMKPKGCEPNVWIYNSLM----DMHGRAKNLRQL 289
+A++ ++ R DAM +V +M GC PNV+ YN L+ D + + L L
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185
Query: 290 E--------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+ YTTVI+ + + D Y+E ++DR GI+ V +
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE------MLDR---GILPNVVT 236
Query: 336 KLSQIEEL 343
S I L
Sbjct: 237 YSSIIAAL 244
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y + D L K+G A E LK +M K + Y L+ S ++ AEE
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF+ G + ++ L+ + + G +++ + + M A V+++G
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K + A K +E+++ GC P VTY +II +IG + A ++ M G V
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y ++ + K GR+ +A +L+ ++ PN+ +Y+SL++
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVN 478
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 152/359 (42%), Gaps = 73/359 (20%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M AGI ++ + ++ +F + ++ F E K H + IL D
Sbjct: 142 HEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF---EIMKRKRCKPDLHTFLILVDC 198
Query: 70 LGKSG---RAFEILKFFRDMKEKG-ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L K+G +AFE+ F +M G + D +++ +++ + VK A E+F + E+ G
Sbjct: 199 LCKAGMDEKAFEV---FHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCG 255
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
D + +++G +K A+
Sbjct: 256 FPPDAIAY-----------------------------------NTMIDGLAKAGHAQEAL 280
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
KV + ++++ C+P +VTY ++N+ C+ G +AE++F M GF V Y+S++ +
Sbjct: 281 KVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGF 340
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-------------- 291
K+GR+++A L +M G P+V + ++D ++ N Q K
Sbjct: 341 AKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNV 400
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVI------DRAMAGIMVGVFSKLSQIEE 342
YTT+I + + N FR+ G+I D ++ F KL +++E
Sbjct: 401 VTYTTIIQGLSKIG------RVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 140/337 (41%), Gaps = 27/337 (8%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M AG D + +++ K G+ E+ A F E + P+ Y +
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEE--MMRGGCKPNVV-TYTTIIQG 409
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K GR + + M G D Y L+ F + + A +L E ++ +
Sbjct: 410 LSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPN 469
Query: 130 LEVFLKLVLMYIEEGMVEKTL-EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
L+++ LV + G VEKTL ++ E K A + + C I+ G K A +++
Sbjct: 470 LQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIF 529
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI---EMQQKGFDKCVVAYSSMVAMY 245
++++S+GC P TY +IN CR ++ E+ F ++++ G+ V Y+ +
Sbjct: 530 QRMVSEGCKPDATTYNILINGLCR-SRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGL 588
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREF 305
K G + A++++ + +G +V YT + + +
Sbjct: 589 CKIGEVDRAVKMLEEASSRGWNADVV-------------------AYTALCTGLCYQGQV 629
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
D V + E GG D A ++ K+ ++E+
Sbjct: 630 DRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLED 666
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 7/253 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH EK+ G + D+ Y + KIG+ ++ + E SR + + Y L
Sbjct: 566 LHDLEKV---GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN---ADVVAYTAL 619
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
C L G+ + F++M +G D + Y +I + +++ A + F E KG
Sbjct: 620 CTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQ 679
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ + LV G V++ ESM EL S I +++GF K AA+
Sbjct: 680 KPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAAL 739
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K++E +IS+G +P VT AS+ + R G KA+++ EM G +++++
Sbjct: 740 KLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799
Query: 246 GKTGRIRDAMRLV 258
K+ ++LV
Sbjct: 800 RKSDESGKLLKLV 812
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 123/312 (39%), Gaps = 51/312 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
+E+ K+A LD G C I+ K G ++ +F + E K D T Y IL
Sbjct: 494 FEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDAT-----TYNILI 548
Query: 68 DSLGKSG-----RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L +S RAF +L D+++ G L D Y L I EV A ++ +EA
Sbjct: 549 NGLCRSRENRVERAFALL---HDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEAS 605
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G D+ + L +G V++ + + + M C I+NG K +
Sbjct: 606 SRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLE 665
Query: 183 AAVKVYEQLISQGCIPGQVTYASI------------------------------------ 206
A K ++++I +G P TY ++
Sbjct: 666 DACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDAL 725
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+ +C+ A K+F +M +G V +S+ ++G+ A L+ +M G
Sbjct: 726 IHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGS 785
Query: 267 EPNVWIYNSLMD 278
P+ + +++D
Sbjct: 786 PPHAATFTAILD 797
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 111/281 (39%), Gaps = 10/281 (3%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM--YKILCDSL 70
M + G DS Y +++ F K+G ++ A L E LD SS ++ Y L + L
Sbjct: 426 MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE-----LDKCSSSPNLQLYSSLVNGL 480
Query: 71 GKSGRAFEILK-FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G + L F K DP + S+I + A +F+ +G D
Sbjct: 481 CDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPD 540
Query: 130 LEVFLKLV--LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ L+ L E VE+ ++ ++ + G K AVK+
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKM 600
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
E+ S+G V Y ++ C G +A +F EM ++G AY ++ K
Sbjct: 601 LEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIK 660
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
++ DA + +M KG +P V Y +L+ A N+ +
Sbjct: 661 VKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
E+ G D+ + L+ + + E + + E M A + + +++ F++ R
Sbjct: 110 GEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRR 169
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF---DKCVVA 237
AV +E + + C P T+ +++ C+ G+ KA +VF EM GF D+ +
Sbjct: 170 ADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRAL-- 227
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+++MV K R+++A + +M+ G P+ YN+++D +A + ++
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278
>gi|224058965|ref|XP_002299667.1| predicted protein [Populus trichocarpa]
gi|222846925|gb|EEE84472.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 137/279 (49%), Gaps = 6/279 (2%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDS-EKVAALFLECESRKLDLTPSS 59
T S + ++ KMK+ G+ D+ Y ++ KI D K L E L +
Sbjct: 87 TKFDSSMKFFHKMKNNGLTPDAITYSTLLAGCMKIKDGYSKALDLVQELNYNGLQM---D 143
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
+ MY L + R E +F MK++G + Y+SL+ +++S K AEEL +
Sbjct: 144 SIMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIFHYSSLLNAYSSDGNYKKAEELVQ 203
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
+ + G++ + + L+ +Y+ G+ EK+ +++ + ++ C++++G +K
Sbjct: 204 DMKSSGLVPNKVILTTLLKVYVRGGLFEKSRDLLVELDTLGFAKNEMPYCLLMDGLAKNG 263
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC-VVAY 238
A V+ ++ + G +Y+ +I+++CR GL+ +A+++ E + K +DK VV
Sbjct: 264 LLDEARSVFNEMKEKRVKSGGYSYSIMISSFCRGGLFEEAKELAEEFEAK-YDKYDVVIL 322
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++++ Y +TG MR + KM P+ ++ L+
Sbjct: 323 NTILCAYCRTGEKESVMRTMRKMDELAISPDYNTFHILI 361
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
K LE+ S+ + + I ++ + + +++K + ++ + G P +TY++++
Sbjct: 56 KALEIYHSIPDESTKTNVFICNSLLRCLVRNTKFDSSMKFFHKMKNNGLTPDAITYSTLL 115
Query: 208 NAYCRI-GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
+I YSKA + E+ G + Y +++A+ R +A +MK +G
Sbjct: 116 AGCMKIKDGYSKALDLVQELNYNGLQMDSIMYGTLLAVCASNNRCEEAQSYFNQMKDEGH 175
Query: 267 EPNVWIYNSLMDMHGRAKNLRQLEK 291
PN++ Y+SL++ + N ++ E+
Sbjct: 176 SPNIFHYSSLLNAYSSDGNYKKAEE 200
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM-YKILCDS 69
+ MKS+G+V + +++ + + G EK L +E ++ L + M Y +L D
Sbjct: 203 QDMKSSGLVPNKVILTTLLKVYVRGGLFEKSRDLLVELDT----LGFAKNEMPYCLLMDG 258
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G E F +MKEK + Y+ +I SF + A+EL +E E K D
Sbjct: 259 LAKNGLLDEARSVFNEMKEKRVKSGGYSYSIMISSFCRGGLFEEAKELAEEFEAKYDKYD 318
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ Y G E + + M ++ +++ F K + Y A + E
Sbjct: 319 VVILNTILCAYCRTGEKESVMRTMRKMDELAISPDYNTFHILIKYFCKEKLYMLAYQTME 378
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
+ +G P + +S+I +I +++A V+
Sbjct: 379 DMHRKGHQPMEELCSSLILHLGKIKAHAEAFSVY 412
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 38/207 (18%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAE-VKVAEELFKEAEEKGMLRDLEVFLKLVL 138
+KFF MK G+ D Y++L+ I + A +L +E G+ D +
Sbjct: 93 MKFFHKMKNNGLTPDAITYSTLLAGCMKIKDGYSKALDLVQELNYNGLQMD-------SI 145
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
MY TL V C N + ++Y + Q+ +G P
Sbjct: 146 MY-------GTLLAV---------------CASNNRCEEAQSY------FNQMKDEGHSP 177
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
Y+S++NAY G Y KAE++ +M+ G V ++++ +Y + G + L+
Sbjct: 178 NIFHYSSLLNAYSSDGNYKKAEELVQDMKSSGLVPNKVILTTLLKVYVRGGLFEKSRDLL 237
Query: 259 AKMKPKGCEPNVWIYNSLMDMHGRAKN 285
++ G N Y LMD G AKN
Sbjct: 238 VELDTLGFAKNEMPYCLLMD--GLAKN 262
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 144/331 (43%), Gaps = 20/331 (6%)
Query: 6 KLH-YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
K+H +M G D Y I++ K G E + S L + Y
Sbjct: 249 KVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLK---PNVVCYN 305
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ + + R + + +M +K D + L+ F V EL ++ E
Sbjct: 306 TVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 365
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G + D+ + ++ + +EG++++ + ++++M + + +++ G + A
Sbjct: 366 GCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDA 425
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ ++I QGC+P VT+ +IIN C+ GL +A ++ +M G + +++YS+++
Sbjct: 426 EELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDG 485
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRAKNLRQLEK---------- 291
GK G+ +A+ L+ M KG PNV Y+S+ + GR + Q+
Sbjct: 486 LGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSD 545
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y VIS+ RE D+ + F NG
Sbjct: 546 AVLYNAVISSLCKRRETDLAIDFLAYMVSNG 576
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 121/302 (40%), Gaps = 40/302 (13%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M S G+ + CY +++ EK L E + P + IL D
Sbjct: 291 RMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKN---CPLDDVTFNILVDFFC 347
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLI-----------------------CSFASI 108
++G +++ M E G + D Y ++I C +I
Sbjct: 348 QNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTI 407
Query: 109 AEVKV------------AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
+ V AEEL ++G L + F ++ ++G+VE+ +E+++ M
Sbjct: 408 SYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQM 467
Query: 157 KNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
N D IS +++G K A+++ +I++G P +TY+S+ A R G
Sbjct: 468 LVNGCN-PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGR 526
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
K ++F +Q V Y+++++ K A+ +A M GC PN Y +
Sbjct: 527 IDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTA 586
Query: 276 LM 277
L+
Sbjct: 587 LI 588
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 75/164 (45%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ + + L K G + ++ + M G D Y+++I + + A EL
Sbjct: 444 FNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMI 503
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ ++ + + EG ++K +++ +++++A + + +++ KRR
Sbjct: 504 NKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETD 563
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
A+ ++S GC+P + TY ++I GL +A+ + E+
Sbjct: 564 LAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
VKV E L + A+ G D+ ++ ++ +EG E E++ M + L +
Sbjct: 248 VKVHEALSQMAQH-GCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNT 306
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ G + A ++ ++ + C VT+ +++ +C+ GL + ++ +M + G
Sbjct: 307 VLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 366
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
V+ Y++++ + K G I +A+ L+ M GC+PN Y
Sbjct: 367 CMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYT 410
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+V G R A+ V +++ S+ C+P Y II + CR G YS A +V + KG
Sbjct: 122 VVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKG 181
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ ++ G + + + ++ K+ GCE ++ YN+++ AK +E
Sbjct: 182 STLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVE 241
Query: 291 K 291
+
Sbjct: 242 E 242
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 82/195 (42%), Gaps = 15/195 (7%)
Query: 144 GMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
G L V+E++ K + L+ +C +++N + +++ +L GC V
Sbjct: 165 GGYSSALRVLEALHAKGSTLDTGNCN--LVINAICDQGCVDEGLEMLRKLPLFGCEADIV 222
Query: 202 TYASIINAYCRIGLYSKAEKVFIE----------MQQKGFDKCVVAYSSMVAMYGKTGRI 251
+Y +++ C + E++ E M Q G + Y++++ K G
Sbjct: 223 SYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHH 282
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
A ++++M G +PNV YN+++ A + E+ T + N + D+
Sbjct: 283 EVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLD-DVTFNI 341
Query: 312 YNEFRMNGGVIDRAM 326
+F G++DR +
Sbjct: 342 LVDFFCQNGLVDRVI 356
>gi|302819015|ref|XP_002991179.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
gi|300141007|gb|EFJ07723.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
Length = 561
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 146/335 (43%), Gaps = 24/335 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF-LECESRKLDLTPSSTHMYKILCD 68
++++ + G + Y +M+++ + G + V +F L +S + P + MY ++
Sbjct: 212 FQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDA-RMYNLMIH 270
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ GK G+ + + ++ MK + + + SL+ A K AE++F++ + +
Sbjct: 271 TYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLL---ACQKTWKDAEDVFRKLQAAKLDP 327
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + LV Y + E + M A + + ++N ++K + A V
Sbjct: 328 DVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVL 387
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+Q+ GC P +Y S+I+AY + L +KAE+ + M++ + + ++ Y
Sbjct: 388 KQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCILMTGYANG 447
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
++ + MR MK G EPN + YT +++AY +FD
Sbjct: 448 NKLDNMMRSFETMKLAGLEPNRHV-------------------YTVLVNAYGSNDDFDSA 488
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ +Y + G D + +++ + Q EE+
Sbjct: 489 IIWYKQMLGTGCKPDPILRTVLLKIAKSHEQTEEI 523
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 13/191 (6%)
Query: 146 VEKTLEVVESMKN--AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIP-GQVT 202
VEK+ E + +K + NIS + F + +A+ +K E L+ QG Q
Sbjct: 97 VEKSPEPLAILKKYAGDGNISRESVVGTLTRFKQMQAWKIIIKFTEWLMEQGWYNFNQKD 156
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y ++ AYC+ G K E +F M + G + Y+ + YG+ A + ++
Sbjct: 157 YFLVLLAYCKDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGRRRSFDKAEAVFQRLL 216
Query: 263 PKGCEPNVWIYNSLMDMH---GRAKNLRQLEKYTTVISAYNM---AREFDMCVKFYNEFR 316
G P Y ++M + GR +++++ K T + + AR +++ + Y +
Sbjct: 217 TTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGK-- 274
Query: 317 MNGGVIDRAMA 327
G +++AM+
Sbjct: 275 --QGKVEQAMS 283
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 151/330 (45%), Gaps = 21/330 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+EKM G+ + ++++F G E+ + E E + + S+T +Y L D+
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIR---SNTIVYNTLMDA 388
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KS E+ F +M++KG+ + Y L+ ++A + + E L +E E+ G+ +
Sbjct: 389 YNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPN 448
Query: 130 LEVFLKLVLMY-IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + L+ Y + M + + MK L S +++ +S + A +
Sbjct: 449 VKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASF 508
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ +G P TY S+++A+ R G K +++ M ++ + Y++++ + K
Sbjct: 509 EEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ 568
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA---KNLRQLEK-------------Y 292
G +A +V++ G +P+V YN LM+ + R L QL K Y
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITY 628
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVI 322
+T+I A+ R+F FY++ + G +
Sbjct: 629 STMIYAFVRVRDFKRAF-FYHKMMVKSGQV 657
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 142/317 (44%), Gaps = 37/317 (11%)
Query: 18 IVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAF 77
I +SG +I+E + +++ + + E R D T + L +G+SG
Sbjct: 166 IPFESGVAREILELAKNLKENQTLGEMLSGFERRVSD-----TECVEALV-MMGESGFVK 219
Query: 78 EILKFFRDMKEKGILEDPSVYASLICS--FASIAEVKVAEE---LFKEAEEKGMLRDLEV 132
L F+ M L++PS+ + CS F + ++A+ L +K RD+ +
Sbjct: 220 SCLYFYEWMS----LQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRL 275
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNI-SDCISCVIVNGFSKR--RAYWAAVKVYE 189
+ + + EV E+M ++N+ D ++C I+ ++ R+ +++E
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMD--KINVYPDNVTCAILITTLRKAGRSAKEVWEIFE 333
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G Q + ++ ++C GL +A + EM++KG + Y++++ Y K+
Sbjct: 334 KMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSN 393
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLE---------KYT 293
I + L +M+ KG +P+ YN LMD + R LR++E YT
Sbjct: 394 HIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYT 453
Query: 294 TVISAYNMAREF-DMCV 309
+ISAY ++ DM
Sbjct: 454 CLISAYGRTKKMSDMAA 470
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 120/274 (43%), Gaps = 6/274 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP-SSTHMYKI 65
L++YE M L S C ++ F +G E++A L S D +Y
Sbjct: 222 LYFYEWMSLQEPSLASPRACSVL--FTLLG-RERMADYILLLLSNLPDKEEFRDVRLYNA 278
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE-VKVAEELFKEAEEK 124
L S R + + + M + + D A LI + K E+F++ EK
Sbjct: 279 AISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEK 338
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ +VF LV + +EG+ E+ L + M+ + + + +++ ++K
Sbjct: 339 GVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEV 398
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ ++ +G P TY +++AY R E + EM+ G + V +Y+ +++
Sbjct: 399 EGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISA 458
Query: 245 YGKTGRIRD-AMRLVAKMKPKGCEPNVWIYNSLM 277
YG+T ++ D A +MK G +P+ Y +L+
Sbjct: 459 YGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALI 492
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 125/288 (43%), Gaps = 20/288 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ G+ + Y +M+A+ + + V L E E L L P+ Y L +
Sbjct: 402 FTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMED--LGLEPN-VKSYTCLISA 458
Query: 70 LGKSGRAFEIL-KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G++ + ++ F MK+ G+ Y +LI +++ + A F+E ++G+
Sbjct: 459 YGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKP 518
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+E + ++ + G K +E+ + M ++ + +++GF+K+ Y A V
Sbjct: 519 SVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVV 578
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ G P +TY ++NAY R G +K ++ EM + YS+M+ +
Sbjct: 579 SEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF--- 635
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
R+RD R + Y+ +M G+ + R EK ++
Sbjct: 636 VRVRDFKR-------------AFFYHKMMVKSGQVPDPRSYEKLRAIL 670
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 104/256 (40%), Gaps = 18/256 (7%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+L LG+ A IL ++ +K D +Y + I ++ A E+++ ++
Sbjct: 243 VLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKI 302
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTL-EVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ D L+ + G K + E+ E M + S + +V F
Sbjct: 303 NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEE 362
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ + ++ +G + Y ++++AY + + E +F EM+ KG Y+ ++
Sbjct: 363 ALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMD 422
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL-------------- 289
Y + + L+ +M+ G EPNV Y L+ +GR K + +
Sbjct: 423 AYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLK 482
Query: 290 ---EKYTTVISAYNMA 302
YT +I AY+++
Sbjct: 483 PSSHSYTALIHAYSVS 498
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 20/171 (11%)
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK-AEKVFIEMQQKG 230
++G S + Y A +VYE + P VT A +I + G +K ++F +M +KG
Sbjct: 280 ISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKG 339
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ +V + G +A+ + +M+ KG N +YN+LMD
Sbjct: 340 VKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMD------------ 387
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
AYN + + + E R G A I++ +++ Q +
Sbjct: 388 -------AYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPD 431
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+KM GI+ D I+ F + G + A LF E LD S Y + +S
Sbjct: 344 YKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVS---YATIINS 400
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR E M +GI D +++ + + K AEE+F+ + + +
Sbjct: 401 LFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPN 460
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y + G +E V++ M+ + + I+NG++K+ AV V
Sbjct: 461 CVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLR 520
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ + +P + YA +I+ Y + G A+ EM+ + ++ V + ++ + G
Sbjct: 521 EMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVG 580
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
R+ +A L+ M KG +P++ Y SL+D + + N
Sbjct: 581 RMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGN 616
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 126/282 (44%), Gaps = 20/282 (7%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLE-----------------CESRKLDLTPSSTHM 62
+D Y +++AF K GD + +LF E ++ +L P+
Sbjct: 265 IDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLV-T 323
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K E ++ M GI+ D +S++ F ++ A LF+E
Sbjct: 324 YTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMY 383
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV-NGFSKRRAY 181
E G+ + + ++ + G V + + M ++ D ++C V +G K
Sbjct: 384 EMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISF-DIVTCTTVMDGLFKVGKT 442
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +V+E ++ P VTY+++++ YC++G AE V +M+++ V+ +SS+
Sbjct: 443 KEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSI 502
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ Y K G + A+ ++ +M + PN +Y L+D + +A
Sbjct: 503 INGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 20/276 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G+ D Y I+ + G +E AL + E + + P++ Y IL L
Sbjct: 660 RMIELGLAPDCITYNTIINTYCIKGKTED--ALDILNEMKSYGIMPNAV-TYNILIGGLC 716
Query: 72 KSG-------RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
K+G F + + R K IL+ ++ L+ AS E+K + + E ++
Sbjct: 717 KTGFVPTPITHKFLVKAYSRSEKADKILQ---IHEKLV---ASGLELKRQKVVLDEMVKR 770
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ DL + L+ Y VEK L+ M + + ++ G S
Sbjct: 771 GISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEM 830
Query: 185 VKVYEQLISQ----GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
++ E+L+S+ G +P TY +++ Y R+G K + IEM KGF + Y+
Sbjct: 831 MEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNV 890
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+++ Y K+G++ +A L+ + KG PN + Y+ L
Sbjct: 891 LISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 926
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 154/397 (38%), Gaps = 92/397 (23%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M ++ ++ Y +++ ++K G+ + E +SR+L+ S ++ IL ++L
Sbjct: 521 EMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLE---ESNVIFDILLNNLK 577
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ GR E DM KGI D YASLI + A + +E +EK + D+
Sbjct: 578 RVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVV 637
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS-DCIS-CVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G + V M EL ++ DCI+ I+N + + A+ +
Sbjct: 638 AYNALIKGLLRLGKYDPRY-VCSRM--IELGLAPDCITYNTIINTYCIKGKTEDALDILN 694
Query: 190 QLISQGCIPGQVTYASIINAYCRIGL-------------YSKAEK--------------- 221
++ S G +P VTY +I C+ G YS++EK
Sbjct: 695 EMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASG 754
Query: 222 --------VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR----------------- 256
V EM ++G +V Y++++ Y + A++
Sbjct: 755 LELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTY 814
Query: 257 ----------------------LVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTT 294
LV++M +G PN Y+ L+ +GR N K T
Sbjct: 815 NTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGN----RKKTI 870
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
++ + + F +K YN + D A +G M+
Sbjct: 871 ILHIEMITKGFVPTLKTYNVL-----ISDYAKSGKMI 902
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 4/239 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+KM+ + + + I+ + K G K + E R ++ P+ T +Y IL D
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQR--NVMPN-TIVYAILIDGY 541
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+G F ++MK + + E ++ L+ + + + A L + KG+ D+
Sbjct: 542 FKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDI 601
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ Y +EG L +V+ MK + ++ G R + V +
Sbjct: 602 VNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLL-RLGKYDPRYVCSR 660
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I G P +TY +IIN YC G A + EM+ G V Y+ ++ KTG
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTG 719
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 19/218 (8%)
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D Y +L+ +F ++ AE LF E +L + ++ K +VV
Sbjct: 266 DIVTYNTLLKAFCKTGDLTRAESLFNE----------------ILGFWKDEDRLKNNDVV 309
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ L + ++ + K + +Y+++I G +P VT +SI+ +CR
Sbjct: 310 TQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRH 369
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G ++A +F EM + G D V+Y++++ K+GR+ +A L ++M +G ++
Sbjct: 370 GKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTC 429
Query: 274 NSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
++MD + ++ E+ I N+A CV +
Sbjct: 430 TTVMDGLFKVGKTKEAEEVFETILKLNLAPN---CVTY 464
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 116/292 (39%), Gaps = 19/292 (6%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIG--DSEKVAALFLECESRKLDLTPSS 59
N + L ++MK I D Y +++ ++G D V + +E L L P
Sbjct: 616 NQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIE-----LGLAPDC 670
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSF--ASIAEVKVAEEL 117
Y + ++ G+ + L +MK GI+ + Y LI + +
Sbjct: 671 I-TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKF 729
Query: 118 FKEAEEKGMLRD--LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+A + D L++ KLV +E +++ V++ M ++ ++ G+
Sbjct: 730 LVKAYSRSEKADKILQIHEKLVASGLE---LKRQKVVLDEMVKRGISADLVTYNALIRGY 786
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE----KVFIEMQQKGF 231
A+K Y Q+ G P TY +++ GL + K+ EM ++G
Sbjct: 787 CTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGL 846
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
Y +V+ YG+ G + + L +M KG P + YN L+ + ++
Sbjct: 847 VPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKS 898
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 114/246 (46%), Gaps = 16/246 (6%)
Query: 52 KLDLTPSSTHMYKILCDS--LGKSGRAF-EILKFFRD---MKEKGILED-------PSV- 97
K+D+ +T + K C + L ++ F EIL F++D +K ++ P++
Sbjct: 264 KIDIVTYNT-LLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLV 322
Query: 98 -YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
Y +LI ++ V+ + L+K+ G++ D+ ++ + G + + + M
Sbjct: 323 TYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREM 382
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
L+ + I+N K A + Q++ +G VT ++++ ++G
Sbjct: 383 YEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKT 442
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+AE+VF + + V YS+++ Y K G++ A ++ KM+ + PNV ++S+
Sbjct: 443 KEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSI 502
Query: 277 MDMHGR 282
++ + +
Sbjct: 503 INGYAK 508
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 124/306 (40%), Gaps = 19/306 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+C ++ + +A F R L L P+ + L SG ++ +
Sbjct: 62 FCTLIRLYLTHDRFSTASATF--SHMRALGLVPT-LPFWNTLLYQFNASGLVSQVKLMYS 118
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
DM G++ D L+ S + ++ +A + + + D + ++ + ++G
Sbjct: 119 DMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI--DNVTYNTVIWGFCQKG 176
Query: 145 MVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
+V++ ++ M L D I+C ++V G+ + A V L+ G +
Sbjct: 177 LVDQGFGLLSEMVKRGLCF-DSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGL 235
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
++I+ YC L S+A ++ + +V Y++++ + KTG + A L ++
Sbjct: 236 NTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEIL- 294
Query: 264 KGCEPNVW-----IYNSLMDMHGRAKNLRQ-LEKYTTVISAYNMAREFDMCVKFYNEFRM 317
W + N+ + KNL+ L YTT+I+AY + Y + M
Sbjct: 295 -----GFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIM 349
Query: 318 NGGVID 323
NG + D
Sbjct: 350 NGIMPD 355
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/240 (18%), Positives = 99/240 (41%), Gaps = 6/240 (2%)
Query: 55 LTPSSTHMY-KILCDSLG---KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
+ P+ TH+Y C + R F M+ G++ + +L+ F +
Sbjct: 50 IPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGL 109
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
V + ++ + G++ D+ LV + G ++ L + + N ++I +
Sbjct: 110 VSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNT 167
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ GF ++ + +++ +G +T ++ YCRIGL AE V + G
Sbjct: 168 VIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGG 227
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
K V+ ++++ Y + + A L+ + ++ YN+L+ + +L + E
Sbjct: 228 VTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAE 287
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 131/287 (45%), Gaps = 10/287 (3%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK-SGRAFEILKFF 83
Y +++A+ G E+ + +E ++ + +Y + L K G E + F
Sbjct: 193 YALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF 252
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+ MK Y +I + ++ ++ +L+ E ++ + LV + E
Sbjct: 253 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE 312
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G+ EK E+ E ++ L + ++ +S+ + A +++ + GC P + +Y
Sbjct: 313 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY 372
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+++AY R GL+S AE VF EM++ G + ++ +++ Y K + +V +M
Sbjct: 373 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 432
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEKY---------TTVISAYNM 301
G EP+ ++ NS+++++GR ++EK T IS YN+
Sbjct: 433 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 479
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 130/298 (43%), Gaps = 55/298 (18%)
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
LI ++ + K AE L+ + E + + + L+ Y G++E+ V+ M+N
Sbjct: 161 LIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHH 220
Query: 161 L----------------------NISDCISC-----------------VIVNGFSKRRAY 181
+ N + I +++N + K
Sbjct: 221 VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKS 280
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ + K+Y ++ S C P TY +++NA+ R GL KAE++F ++Q+ G + V Y+++
Sbjct: 281 YMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 340
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------KNLRQL-- 289
+ Y + G A + + M+ GCEP+ YN ++D +GRA + +++L
Sbjct: 341 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGI 400
Query: 290 ----EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ + ++SAY+ AR+ C E NG D + M+ ++ +L Q ++
Sbjct: 401 APTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM 458
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 142/342 (41%), Gaps = 22/342 (6%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N++ + +++MK + Y ++ + K S L+ CE R P+
Sbjct: 244 NTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLY--CEMRSHQCKPNIC- 300
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L ++ + G + + F ++E G+ D VY +L+ S++ A E+F
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G D + +V Y G+ V E MK + + ++++ +SK R
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ +++ G P S++N Y R+G ++K EK+ EM+ + Y+ +
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 480
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ +YGK G + L ++K K P+V +T+ I AY+
Sbjct: 481 INIYGKAGFLERIEELFVELKEKNFRPDVVT-------------------WTSRIGAYSR 521
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ + C++ + E +G D A +++ S Q+E++
Sbjct: 522 KKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 563
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++++ + ++ Y A +Y QL+ +P + TYA +I AYC GL +AE V +EMQ
Sbjct: 160 LLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNH 219
Query: 230 GFDK---CVVAYSSMV-AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
V Y++ + + + G +A+ + +MK C+P YN +++++G+A
Sbjct: 220 HVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 277
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 125/271 (46%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L M++ G + Y +++ F K+G ++ L E + L +T + L
Sbjct: 403 LEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLK---PNTVGFNCL 459
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ K R E ++ FR+M KG D + SLI + E+K A L ++ +G+
Sbjct: 460 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 519
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + + L+ ++ G +++ ++V M + + ++ G + A
Sbjct: 520 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARS 579
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++E+++ G +P ++ +IN CR G+ +A + EM +G +V ++S++
Sbjct: 580 LFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 639
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ GRI D + + K++ +G P+ YN+LM
Sbjct: 640 RAGRIEDGLTMFRKLQAEGIPPDTVTYNTLM 670
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 7/275 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTHMYKILCD 68
+ + S GIV D Y ++ ++K G + L LE + R P+ + Y IL D
Sbjct: 372 DMVTSYGIVPDVCTYNSLIYGYWKKG----LVGLALEVLRDMRNKGCKPN-VYSYTILVD 426
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G+ E +M G+ + + LI +F + A E+F+E KG
Sbjct: 427 GFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 486
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ F L+ E ++ L ++ M + + + ++N F +R A K+
Sbjct: 487 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 546
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ QG + ++TY S+I CR G KA +F +M + G ++ + ++ ++
Sbjct: 547 NEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRS 606
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
G + +A+ +M +G P++ +NSL++ RA
Sbjct: 607 GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 641
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 2/199 (1%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
L RDM +G++ + Y +LI +F E+K A +L E +G L D + L+
Sbjct: 508 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKG 567
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIP 198
G V+K + E M L + ISC +++NG + AV+ ++++ +G P
Sbjct: 568 LCRAGEVDKARSLFEKMLRDGL-VPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 626
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
VT+ S+IN CR G +F ++Q +G V Y+++++ K G + DA L+
Sbjct: 627 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLL 686
Query: 259 AKMKPKGCEPNVWIYNSLM 277
+ G PN ++ L+
Sbjct: 687 DEGIEDGFVPNDRTWSILL 705
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 120/304 (39%), Gaps = 44/304 (14%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE------CE---------------- 49
+MK GIV + IM + K G + L LE CE
Sbjct: 130 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG 189
Query: 50 --------------SRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDP 95
SRK+ P + + ++ +L L RDM + G + +
Sbjct: 190 NCHKVAANVFYDMLSRKI---PPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNS 246
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
+Y +LI S + V A +L +E G + D E F ++L + + + ++V
Sbjct: 247 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 306
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
M D ++NG K AA ++ ++ P V + ++I+ + G
Sbjct: 307 MLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGR 362
Query: 216 YSKAEKVFIEM-QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
A+ V +M G V Y+S++ Y K G + A+ ++ M+ KGC+PNV+ Y
Sbjct: 363 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYT 422
Query: 275 SLMD 278
L+D
Sbjct: 423 ILVD 426
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 145/354 (40%), Gaps = 26/354 (7%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L E+M G V D+ + ++ K + A + R TP Y L
Sbjct: 266 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF--TPDDI-TYGYL 322
Query: 67 CDSLGKSGRAFEILK-FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE-AEEK 124
+ L K GR F+R K + ++ +LI F + + A+ + +
Sbjct: 323 MNGLCKIGRVDAAKDLFYRIPKPTSV-----IFNTLIHGFVTHGRLDDAKAVLSDMVTSY 377
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G++ D+ + L+ Y ++G+V LEV+ M+N + ++V+GF K A
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 437
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ + G P V + +I+A+C+ +A ++F EM +KG V ++S+++
Sbjct: 438 YNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 497
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------- 291
+ I+ A+ L+ M +G N YN+L++ R +++ K
Sbjct: 498 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLD 557
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y ++I A E D + + +G V I++ + +EE
Sbjct: 558 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEE 611
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 87/195 (44%), Gaps = 9/195 (4%)
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+KG VY LI S E K + L + +++G++ +F+ ++ Y + G
Sbjct: 98 QKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPG 157
Query: 148 KTLEVVESMKN-----AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
+T ++ M+N + + ++V+G + A V+ ++S+ P T
Sbjct: 158 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG----NCHKVAANVFYDMLSRKIPPTLFT 213
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
+ ++ A C + A V +M + G V Y +++ K R+ +A++L+ +M
Sbjct: 214 FGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 273
Query: 263 PKGCEPNVWIYNSLM 277
GC P+ +N ++
Sbjct: 274 LMGCVPDAETFNDVI 288
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 131/337 (38%), Gaps = 57/337 (16%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI---------------- 102
S +Y++L LG +G I + MK++GI+ S++ S++
Sbjct: 104 SFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLM 163
Query: 103 --------C-----SFASIAEV-------KVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
C S+ + E+ KVA +F + + + L F ++
Sbjct: 164 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCA 223
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
V+ L V+ M + I +++ SK A+++ E++ GC+P T
Sbjct: 224 VNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 283
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
+ +I C+ ++A K+ M +GF + Y ++ K GR+ A L ++
Sbjct: 284 FNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI- 342
Query: 263 PKGCEPNVWIYNSLMD---MHGRAKNLRQLEK--------------YTTVISAYNMAREF 305
PK P I+N+L+ HGR + + + Y ++I Y
Sbjct: 343 PK---PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLV 399
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ ++ + R G + I+V F KL +I+E
Sbjct: 400 GLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDE 436
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 131/265 (49%), Gaps = 4/265 (1%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+++ L D+L K+G + K F DM+EK I + + SL+ + ++ A+E+ +
Sbjct: 206 YVFGCLLDALCKNGSVKDASKVFEDMREK-IPPNLRYFTSLLYGWCREGKLMEAKEVLVQ 264
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDCISCVIVNGFSKR 178
+E G+ D+ VF L+ Y G + +++ M+ E N ++C + +I
Sbjct: 265 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPN-ANCYTVLIQALCRTE 323
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A++V+ ++ GC VTY ++I+ +C+ G+ K V +M++KG V Y
Sbjct: 324 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTY 383
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
++ + K + + + L+ KMK GC P++ IYN ++ + + +++ + + A
Sbjct: 384 MQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLACNFREVKEAVRLWNEMEA 443
Query: 299 YNMAREFDMCVKFYNEFRMNGGVID 323
++ DM V N F G +I+
Sbjct: 444 NGLSPGADMFVIMINGFTSQGYLIE 468
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 102/222 (45%), Gaps = 6/222 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF-LECESRKLDLTPSSTHMYKILCDSL 70
+MK AG+ D + ++ + G K+A + L + RK P++ + Y +L +L
Sbjct: 264 QMKEAGLEPDIVVFTNLLSGYAHAG---KMADAYDLLNDMRKRGYEPNA-NCYTVLIQAL 319
Query: 71 GKS-GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++ R E ++ F +M+ G D Y +LI F + + + +KG++
Sbjct: 320 CRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS 379
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++++++ + ++ E+ LE++E MK + I V++ R AV+++
Sbjct: 380 QVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLACNFREVKEAVRLWN 439
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ + G PG + +IN + G +A F EM +G
Sbjct: 440 EMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEMVSRGI 481
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 152 VVESMK--NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
++E M+ N EL I + V++ F+ AV+V +++ G P + + +++A
Sbjct: 156 LIEEMRKENPEL-IEPELFVVLIRRFASANMVKKAVEVLDEMPKYGFEPDEYVFGCLLDA 214
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
C+ G A KVF +M++K + ++S++ + + G++ +A ++ +MK G EP+
Sbjct: 215 LCKNGSVKDASKVFEDMREK-IPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPD 273
Query: 270 VWIYNSLMDMHGRA 283
+ ++ +L+ + A
Sbjct: 274 IVVFTNLLSGYAHA 287
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 97/230 (42%), Gaps = 6/230 (2%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE-VKVAEELFKEAEEKGMLRD 129
GK A+++L DM+++G + + Y LI + + + A +F E E G D
Sbjct: 288 GKMADAYDLLN---DMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 344
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + GM++K V++ M+ + S I+ K+ + +++ E
Sbjct: 345 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIE 404
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ GC P + Y +I C +A +++ EM+ G + M+ + G
Sbjct: 405 KMKQIGCHPDLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQG 464
Query: 250 RIRDAMRLVAKMKPKG--CEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+ +A +M +G P SL++ R L + + IS
Sbjct: 465 YLIEACSHFKEMVSRGIFSAPQYGTLKSLLNTLLRDDKLEMAKDVWSCIS 514
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 9/249 (3%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y + DSL + G+ L + MK+ GI D Y SLI V+ + +
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G+ D+ F L+ +Y +EG + + + M +N + ++NG
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLL 305
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A KV L+S+G P VTY ++IN YC+ K+ M + G D Y+++
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAK----NLRQLEKYTT 294
Y + G+ A +++ +M G P+++ +N L+D HG+ L L+K T
Sbjct: 366 YQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKT 425
Query: 295 VIS--AYNM 301
V+ YN+
Sbjct: 426 VVGIITYNI 434
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 3/251 (1%)
Query: 43 ALFLECESR--KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYAS 100
+L L C + KL PS + L + R +E + + G + +Y +
Sbjct: 131 SLALSCLGKMMKLGFEPSIV-TFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNT 189
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
+I S +V A ++ K ++ G+ D+ + L+ G + ++ M
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
++ +++ + K A K Y ++I + P VTY S+IN C GL +A+
Sbjct: 250 ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
KV + KGF V Y++++ Y K R+ D M+++ M G + + + YN+L +
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 281 GRAKNLRQLEK 291
+A EK
Sbjct: 370 CQAGKFSAAEK 380
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 120/280 (42%), Gaps = 17/280 (6%)
Query: 43 ALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI 102
AL L C+ + PS ++L ++ K + ++ FR ++ GI D + +LI
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLI-AIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 103 CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN 162
F A + +A + + G + F LV + + + +V+ +
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 163 ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
+ I I++ ++ A+ V + + G P VTY S+I G + + ++
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 223 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---M 279
+M + G V+ +S+++ +YGK G++ +A + +M + PN+ YNSL++ +
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 280 HGRAKNLRQLEK-------------YTTVISAYNMAREFD 306
HG +++ Y T+I+ Y A+ D
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVD 341
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 111/301 (36%), Gaps = 39/301 (12%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L + MK GI D Y ++ + G + V+A L + ++ ++P +
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSG-TWGVSARILS-DMMRMGISPDVI-TF 257
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D GK G+ E K + +M ++ + + Y SLI + A+++
Sbjct: 258 SALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS 317
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG + + L+ Y + V+ ++++ M ++ + G+ + + A
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSA 377
Query: 184 AVKVYEQLISQGCIP-----------------------------------GQVTYASIIN 208
A KV +++S G P G +TY II
Sbjct: 378 AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIK 437
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM-KPKGCE 267
C+ A +F + KG V+ Y +M+ + R+A L KM K G
Sbjct: 438 GLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLM 497
Query: 268 P 268
P
Sbjct: 498 P 498
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 141/331 (42%), Gaps = 22/331 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y + GI D Y ++ F +G +V L + R ++L + + Y IL D+
Sbjct: 241 YSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNL---NVYTYNILIDA 297
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G + M E+G D + +L+ + +V A +LF E G+ D
Sbjct: 298 LCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPD 357
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L++ Y + +++ L + M +L + +++G K A +++
Sbjct: 358 VWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFS 417
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G P +TY +++A C+I L KA ++F M ++G V +Y+ ++ Y K+
Sbjct: 418 AIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSK 477
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
RI +AM L +M + P+ YN L+D G K+ R +
Sbjct: 478 RIDEAMNLFEEMHRRNLVPDSVTYNCLID--GLCKSGRISHAW----------------- 518
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
+ +N G +D I+ FSK+ +
Sbjct: 519 ELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 3/275 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L +++ + + G +LD Y ++ KIG + + L + E + + + +Y
Sbjct: 165 RKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQ---VVRPNVVIY 221
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ D L K G E + D+ +GI D Y LI F + + + L + +
Sbjct: 222 NMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVD 281
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + ++ + L+ ++GM+ K ++ M +++G+
Sbjct: 282 RNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVE 341
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K+++ G P +Y +I YC+ +A +F +M K +V YSS++
Sbjct: 342 ARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLID 401
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+GRI A L + + G PNV YN ++D
Sbjct: 402 GLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLD 436
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 16/216 (7%)
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G V K LE +S+ + + ++NG K A ++ ++ Q P V
Sbjct: 161 NGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVI 220
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y I++ C+ GL ++A ++ ++ +G D V Y+ ++ + G+ R+ RL+ M
Sbjct: 221 YNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMV 280
Query: 263 PKGCEPNVWIYNSLMD------MHGRAKNLRQLE----------KYTTVISAYNMAREFD 306
+ NV+ YN L+D M G+A ++R L + T++S Y + +
Sbjct: 281 DRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVV 340
Query: 307 MCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
K ++ F G D I++ + K ++I+E
Sbjct: 341 EARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDE 376
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 91/208 (43%), Gaps = 3/208 (1%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG G AF +L + ++G + +++ EV+ A E +G L D
Sbjct: 126 LGHMGFAFSVLGM---VLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLD 182
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G+ + E++ M+ + + I +IV+G K A +Y
Sbjct: 183 EVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYS 242
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G P TY +I+ +C +G + + ++ +M + + V Y+ ++ K G
Sbjct: 243 DVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKG 302
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ A + M +G P++ +N+LM
Sbjct: 303 MLGKAHDMRNLMIERGQRPDLVTFNTLM 330
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 29/287 (10%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L + + MK G V D+ CY +++ GD E+ A L E + +L ST
Sbjct: 364 EDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLER--AHTLRSEMLQNNLVLDSTTQT 421
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEA 121
++C L K G E ++ F +M E G DP+V Y +LI F ++ A LF +
Sbjct: 422 IMIC-GLCKRGLVDEAMQIFDEMGEHGC--DPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E M + +FL+L L + E ++V M C S ++ +
Sbjct: 479 E---MGNNPSLFLRLTLGANQVRDSESLRKLVHDM---------CQSGQVLKAY------ 520
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
K+ +I G +P VTY ++IN C+ A ++F E+Q KG + Y ++
Sbjct: 521 ----KLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ + R DAM L + G P++ IYNS+M R K L Q
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQ 623
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 120/286 (41%), Gaps = 6/286 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y +M +AG + Y +M+ K G + +F E R + P+ +Y +L
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI--MPN-VKIYTVL 248
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
SL +G+ E ++ MK+KG L D Y + + + V A + ++ G
Sbjct: 249 LSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGF 308
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L+ + L+ + ++ ++M ++ + +++ G ++ A+
Sbjct: 309 ALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALS 368
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + +G +P Y +++ C G +A + EM Q + M+
Sbjct: 369 FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC 428
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
K G + +AM++ +M GC+P V YN+L+D GR + R L
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARML 474
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 17/259 (6%)
Query: 100 SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA 159
SL+ +S A+ + + L +A G+ F LV + G ++ M
Sbjct: 108 SLLLRLSSHADEAMFDAL-ADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEF 166
Query: 160 ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
+ + + I+ A+ +Y ++++ GC P + TY +++ C+ G+ A
Sbjct: 167 QSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDA 226
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD- 278
K+F EM +G V Y+ +++ G+I +A++L+ MK KGC P+ YN+ +
Sbjct: 227 LKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSG 286
Query: 279 --MHGRAKNLRQ-------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
GR Q L+ Y+ +I AR FD +Y D
Sbjct: 287 LCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346
Query: 324 RAMAGIMVGVFSKLSQIEE 342
+ IM+ ++ +IE+
Sbjct: 347 VVLYTIMIRGCAEAGRIED 365
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 118/282 (41%), Gaps = 32/282 (11%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L ++ R E +++ M E+ I D +Y +I A ++ A +
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+KG + D + ++ + + G +E+ + M L + +++ G KR
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVD 434
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV------ 236
A+++++++ GC P +TY ++I+ + R G +A +F +M+ +
Sbjct: 435 EAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGA 494
Query: 237 -------AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+ +V ++G++ A +L+ + G P+V YN+L++ +A+NL
Sbjct: 495 NQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNL--- 551
Query: 290 EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
D V+ + E ++ G D G ++
Sbjct: 552 ----------------DGAVRLFKELQLKGISPDEITYGTLI 577
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 112/272 (41%), Gaps = 41/272 (15%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P+S+ + L + +GR + ++ F M E VY +++ + + +A
Sbjct: 134 PASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALA 193
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L+ G + + L+ ++GM L++ + M + + + I V+++
Sbjct: 194 LYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLC 253
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF----- 231
AV++ + +GC+P +VTY + ++ C++G ++A + + +Q GF
Sbjct: 254 NAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLK 313
Query: 232 ------------------------------DKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
VV Y+ M+ + GRI DA+ + M
Sbjct: 314 GYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVM 373
Query: 262 KPKGCEPNVWIYNSLMDM---HG---RAKNLR 287
K KG P+ + YN+++ + HG RA LR
Sbjct: 374 KKKGFVPDTFCYNTVLKVLCDHGDLERAHTLR 405
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 102/230 (44%), Gaps = 4/230 (1%)
Query: 50 SRKLDLTPSSTHMYKILCDSLGKSGRAFE-ILKFFRDMKEKGILEDPSVYASLICSFASI 108
S +L P H +L L S A E + D + G+ S +A+L+ + +S
Sbjct: 94 SPRLRSRPLHAHAVSLL---LRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSA 150
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
A + F +E V+ ++ ++ G++ L + M A +
Sbjct: 151 GRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATY 210
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
V+++G K+ A+K++++++ +G +P Y ++++ C G +A ++ M+
Sbjct: 211 NVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKD 270
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KG V Y++ ++ K GR+ +A + + ++ G + Y+ L+D
Sbjct: 271 KGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLID 320
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 5/217 (2%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K GR I K + M E G+ +D + LI +F + +V A E+ +++ E G+
Sbjct: 238 KFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPC 297
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F KL+ + +E + LE+V +M N I+NGF K A +V+
Sbjct: 298 NDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFN 357
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L +G P V Y ++I+ +C++G A K++ EM KGF +Y++++ + K G
Sbjct: 358 ALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIG 417
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRA 283
+ +AM+L KM G + N+L + +HGR
Sbjct: 418 NLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRT 454
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 97/208 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y+ + + K+ + + F +K++G D +Y +LI F + +++ A +L+ E
Sbjct: 336 YQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMI 395
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+KG L + + L+ + + G +++ +++ + M ++ + ++ G
Sbjct: 396 DKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTD 455
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + ++ + + +TY ++I +CR G ++ + E+Q KG +Y+ ++
Sbjct: 456 EAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLI 515
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ G +++A + M +G +P V
Sbjct: 516 QKLCQLGSVQEAKEMWNDMHNRGLQPMV 543
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
MY L K G+ + K + +M +KG L + Y +LI F I + A +L+K+
Sbjct: 370 MYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKM 429
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRA 180
+ G L+L G ++ + M + + D I+ ++ GF +
Sbjct: 430 LDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNI-VCDVITYNTLIQGFCREGK 488
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ + ++L ++G P +YA +I C++G +A++++ +M +G V
Sbjct: 489 VLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDH 548
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+++ + G + + M + M +P
Sbjct: 549 IISGLCEQGYVVEGMEWLITMLKSNLKP 576
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 7/211 (3%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY- 63
SKL + +M G + + Y ++ F KIG+ ++ L+ + LD T +
Sbjct: 388 SKLWF--EMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLY----KKMLDSGYKETTLSC 441
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L L GR E FFR+M K I+ D Y +LI F +V + +L KE +
Sbjct: 442 NTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQA 501
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ + L+ + G V++ E+ M N L C I++G ++
Sbjct: 502 KGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVE 561
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
++ ++ P + T+ +I + +IG
Sbjct: 562 GMEWLITMLKSNLKPQKETFYKLIQSLIQIG 592
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
LTP + K++ K +L+ M K D Y +I F A
Sbjct: 294 LTPCNDAFNKLI-SGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQA 352
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
E+F +++G D+ ++ L+ + + G +E ++ M + ++ ++ G
Sbjct: 353 FEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYG 412
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K A+K+Y++++ G ++ ++I C G +A F EM K
Sbjct: 413 FCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCD 472
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V+ Y++++ + + G++ + L+ +++ KG +P+ Y L+
Sbjct: 473 VITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLI 515
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+KM GI+ D I+ F + G + A LF E LD S Y + +S
Sbjct: 344 YKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVS---YATIINS 400
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR E M +GI D +++ + + K AEE+F+ + + +
Sbjct: 401 LFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPN 460
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y + G +E V++ M+ + + I+NG++K+ AV V
Sbjct: 461 CVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLR 520
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ + +P + YA +I+ Y + G A+ EM+ + ++ V + ++ + G
Sbjct: 521 EMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVG 580
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
R+ +A L+ M KG +P++ Y SL+D + + N
Sbjct: 581 RMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGN 616
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 7/278 (2%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
++ L +MKS GI+ ++ Y ++ K G EK + E + TP +
Sbjct: 686 TEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPIT--- 742
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+K L + +S +A +IL+ + G+ +VY +LI F + + A+ + E
Sbjct: 743 HKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMV 802
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G+ DL + L+ Y VEK L+ M + + ++ G S
Sbjct: 803 KRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLME 862
Query: 183 AAVKVYEQLISQ----GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
++ E+L+S+ G +P TY +++ Y R+G K + IEM KGF + Y
Sbjct: 863 EMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTY 922
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+ +++ Y K+G++ +A L+ + KG PN + Y+ L
Sbjct: 923 NVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 960
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 142/326 (43%), Gaps = 24/326 (7%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M ++ ++ Y +++ ++K G+ + E +SR+L+ S ++ IL ++L
Sbjct: 521 EMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLE---ESNVIFDILLNNLK 577
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ GR E DM KGI D YASLI + A + +E +EK + D+
Sbjct: 578 RVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVV 637
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS-DCIS-CVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G + V M EL ++ DCI+ I+N + + A+ +
Sbjct: 638 AYNALIKGLLRLGKYDPRY-VCSRM--IELGLAPDCITYNTIINTYCIKGKTEDALDILN 694
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ S G +P VTY +I C+ G KAE EM F + + +V Y ++
Sbjct: 695 EMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSE 754
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYT 293
+ +++ K+ G E ++ +YN+L+ + R R+ L Y
Sbjct: 755 KADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYN 814
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNG 319
+I Y + +K Y++ ++G
Sbjct: 815 ALIRGYCTGSHVEKALKTYSQMFVDG 840
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 122/265 (46%), Gaps = 4/265 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M S GI D Y +++ ++K G+ ++ E + + + + Y L L +
Sbjct: 592 MYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVA---YNALIKGLLR 648
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G+ ++ M E G+ D Y ++I ++ + + A ++ E + G++ +
Sbjct: 649 LGK-YDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVT 707
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + G VEK ++ M E + +V +S+ ++++E+L+
Sbjct: 708 YNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLV 767
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+ G Y ++I +CR+G+ KA+ V EM ++G +V Y++++ Y +
Sbjct: 768 ASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVE 827
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLM 277
A++ ++M G PN+ YN+L+
Sbjct: 828 KALKTYSQMFVDGIAPNITTYNTLL 852
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 126/283 (44%), Gaps = 22/283 (7%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLE-----------------CESRKLDLTPSSTHM 62
+D Y +++AF K GD + +LF E ++ +L P+
Sbjct: 265 IDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLV-T 323
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + K E ++ M GI+ D +S++ F ++ A LF+E
Sbjct: 324 YTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMY 383
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRA 180
E G+ + + ++ + G V + + M + +I C + +++G K
Sbjct: 384 EMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTT--VMDGLFKVGK 441
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +V+E ++ P VTY+++++ YC++G AE V +M+++ V+ +SS
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
++ Y K G + A+ ++ +M + PN +Y L+D + +A
Sbjct: 502 IINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 135/336 (40%), Gaps = 21/336 (6%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIG--DSEKVAALFLECESRKLDLTPSS 59
N + L ++MK I D Y +++ ++G D V + +E L L P
Sbjct: 616 NQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIE-----LGLAPDC 670
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
Y + ++ G+ + L +MK GI+ + Y LI V+ AE
Sbjct: 671 I-TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALD 729
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E + LV Y +K L++ E + + L +S + ++ F +
Sbjct: 730 EMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLG 789
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A V ++++ +G VTY ++I YC KA K + +M G + Y+
Sbjct: 790 MTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYN 849
Query: 240 SMVAMYGKTG----RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTV 295
+++ G + + +LV++M +G PN Y+ L+ +GR N K T +
Sbjct: 850 TLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGN----RKKTII 905
Query: 296 ISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
+ + + F +K YN + D A +G M+
Sbjct: 906 LHIEMITKGFVPTLKTYNVL-----ISDYAKSGKMI 936
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 146/363 (40%), Gaps = 63/363 (17%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
SQ KL Y + M G+V D ++ + K+GD + +A +L R D+
Sbjct: 111 SQVKLMYSD-MLFCGVVPDVFSVNVLVHSLCKVGDLD-LALGYL----RNNDVVDIDNVT 164
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + G + +M ++G+ D L+ + I V+ AE +
Sbjct: 165 YNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV 224
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR---- 178
+ G+ +D+ L+ Y E G++ + E++E+ +++ I ++ F K
Sbjct: 225 DGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLT 284
Query: 179 RA---------YWA-----------------------------------------AVKVY 188
RA +W + +Y
Sbjct: 285 RAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLY 344
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++I G +P VT +SI+ +CR G ++A +F EM + G D V+Y++++ K+
Sbjct: 345 KKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKS 404
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
GR+ +A L ++M +G ++ ++MD + ++ E+ I N+A C
Sbjct: 405 GRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPN---C 461
Query: 309 VKF 311
V +
Sbjct: 462 VTY 464
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 114/246 (46%), Gaps = 16/246 (6%)
Query: 52 KLDLTPSSTHMYKILCDS--LGKSGRAF-EILKFFRD---MKEKGILED-------PSV- 97
K+D+ +T + K C + L ++ F EIL F++D +K ++ P++
Sbjct: 264 KIDIVTYNT-LLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLV 322
Query: 98 -YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
Y +LI ++ V+ + L+K+ G++ D+ ++ + G + + + M
Sbjct: 323 TYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREM 382
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
L+ + I+N K A + Q++ +G VT ++++ ++G
Sbjct: 383 YEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKT 442
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+AE+VF + + V YS+++ Y K G++ A ++ KM+ + PNV ++S+
Sbjct: 443 KEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSI 502
Query: 277 MDMHGR 282
++ + +
Sbjct: 503 INGYAK 508
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 125/306 (40%), Gaps = 19/306 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+C ++ + +A F R L L P+ + L SG ++ +
Sbjct: 62 FCTLIRLYLTHDRFSTASATF--SHMRALGLVPT-LPFWNTLLYQFNASGLVSQVKLMYS 118
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
DM G++ D L+ S + ++ +A + + + D + ++ + ++G
Sbjct: 119 DMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI--DNVTYNTVIWGFCQKG 176
Query: 145 MVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
+V++ ++ M L D I+C ++V G+ + A V L+ G +
Sbjct: 177 LVDQGFGLLSEMVKRGLCF-DSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGL 235
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
++I+ YC GL S+A ++ + +V Y++++ + KTG + A L ++
Sbjct: 236 NTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEIL- 294
Query: 264 KGCEPNVW-----IYNSLMDMHGRAKNLRQ-LEKYTTVISAYNMAREFDMCVKFYNEFRM 317
W + N+ + KNL+ L YTT+I+AY + Y + M
Sbjct: 295 -----GFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIM 349
Query: 318 NGGVID 323
NG + D
Sbjct: 350 NGIMPD 355
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 100/240 (41%), Gaps = 6/240 (2%)
Query: 55 LTPSSTHMY-KILCDSLG---KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
+ P+ TH+Y C + R F M+ G++ + +L+ F +
Sbjct: 50 IPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGL 109
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
V + ++ + G++ D+ LV + G ++ L + + N ++I +
Sbjct: 110 VSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNT 167
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ GF ++ + +++ +G +T ++ YCRIGL AE V + G
Sbjct: 168 VIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGG 227
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
K V+ ++++ Y + G + A L+ + ++ YN+L+ + +L + E
Sbjct: 228 VTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAE 287
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 117/271 (43%), Gaps = 16/271 (5%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
++ D+ K+G FE++K + MK G L + +Y S+ + E + E E
Sbjct: 855 LMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGA 914
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G DL +F L+ MY G ++T +V +S+ A L + ++ + +
Sbjct: 915 GFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEG 974
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ +G P +Y S++ A + L +A+++F EM+ K + Y M+ +
Sbjct: 975 FTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKI 1034
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------- 291
Y G A L+A MK G EP + + LM +G A + E
Sbjct: 1035 YRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVS 1094
Query: 292 ---YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y+TV AY ++D+ +K E + +G
Sbjct: 1095 TLPYSTVFDAYLKNGDYDLGIKKLLEMKRDG 1125
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 2/288 (0%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ M GI D + ++ A K G AL L E R+ L P Y L +
Sbjct: 245 DTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVI-TYNTLISAC 303
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+S + + F +M D Y +++ + + AE LF E EKG + D
Sbjct: 304 SQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDA 363
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + +EG V+K E + A ++ +++ + K AV +Y++
Sbjct: 364 VTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDE 423
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ + GC P VTY +I++ ++ ++A KV +M G +VA+S+++ Y K GR
Sbjct: 424 MRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGR 483
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-KNLRQLEKYTTVIS 297
DA + M G +P+ Y ++D+ R+ + + L Y T+++
Sbjct: 484 RADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMN 531
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEK--TLEVVE 154
V+ +++ +A A +L ++G+ DL F L+ + G + L+++
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLF 282
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
++ + L +++ S+ AV V+E++I+ C P TY ++++ + R G
Sbjct: 283 EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCG 342
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+AE++F E+ +KGF V Y+S++ + K G + ++ G + N YN
Sbjct: 343 KAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYN 402
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
+++ M+G+ M R D+ V Y+E R G D +M+
Sbjct: 403 TMIHMYGK------------------MGR-LDLAVGLYDEMRAVGCTPDAVTYTVMIDSL 443
Query: 335 SKLSQIEE 342
K+ +I E
Sbjct: 444 GKMDKIAE 451
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 147/341 (43%), Gaps = 25/341 (7%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG- 71
M+ GI Y I+ + K+G E L + + L S + I+ ++ G
Sbjct: 701 MQFIGIEASKNIYESIISTYCKLGFPETAHGLMDDALQSGIPLNILSCRV--IIIEAYGN 758
Query: 72 -KSGRAFEIL-KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K + EIL K R + GI D ++ +LI ++A + A +F + G L
Sbjct: 759 IKLWQQAEILVKGLR--QASGI--DRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPT 814
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ ++ I +G +++ VV +++ + IS ++++ F+K + +K+Y
Sbjct: 815 VDSVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYN 874
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + G +P Y S+ + C + E + EM+ GF + ++S++ MY G
Sbjct: 875 GMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAG 934
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH----------------GRAKNLRQLEKYT 293
++ + G EP+ YN+L+ M+ G+ +L+ Y
Sbjct: 935 NFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYK 994
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
++++A A + + + E R ++R++ +M+ ++
Sbjct: 995 SLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIY 1035
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 21/177 (11%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ +E L ++ P A ++ R S AE+VF+ +G V +++M+
Sbjct: 173 ALDAFEWL-ARSTAPASRAVAVVLGVLGRARQDSIAEEVFLRFAGEG--ATVQVFNAMMG 229
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG-----------------RAKNL 286
+Y ++GR DA +L+ M +G +P++ +N+L++ R L
Sbjct: 230 VYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGL 289
Query: 287 R-QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
R + Y T+ISA + + + V + E + D MV V + + EE
Sbjct: 290 RPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEE 346
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 34/275 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M ++G+ D Y +++ F + G++EK+ L+ + D MY++L +
Sbjct: 491 FDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLY---RTMMNDNYRPDDDMYQVLLVA 547
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLIC--SFASIAEVKV-------AEELFKE 120
L K + EI + +DM+ L+C S I+ + + +L K+
Sbjct: 548 LAKEDKCEEIEEIIQDME-------------LLCQMSLGVISTILIKARCVSQGGKLLKK 594
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRR 179
A +G D + ++ Y+ E+ L ++E +++ + D IS C I+ K+
Sbjct: 595 ACLQGYKPDAKSLWSIMNAYVMTEKHEEGLSLLECIRDHVSSSQDLISECSIILLCRKQ- 653
Query: 180 AYWAAVKVYEQLISQGCI--PGQV--TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
++ YEQ + + PGQ Y +I L+S+A +VF +MQ G +
Sbjct: 654 ---TSISAYEQYSQRLMLKYPGQNCNLYEHLITCLVEAELFSEACQVFCDMQFIGIEASK 710
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
Y S+++ Y K G A L+ G N+
Sbjct: 711 NIYESIISTYCKLGFPETAHGLMDDALQSGIPLNI 745
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 44/254 (17%), Positives = 99/254 (38%), Gaps = 3/254 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ AG D + ++ + G+ ++ ++ L+ Y L
Sbjct: 910 EMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLE---PDEDTYNTLIVMYC 966
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+S R E +M ++G+ Y SL+ + A + A++LF+E K +
Sbjct: 967 RSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRS 1026
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
++ ++ +Y G K ++ MK + + +++ + A V L
Sbjct: 1027 IYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSL 1086
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S + Y+++ +AY + G Y K +EM++ G + ++ + +
Sbjct: 1087 KSSSLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCEQT 1146
Query: 252 RDAMRLVAKMKPKG 265
DA+ L+ ++ G
Sbjct: 1147 ADAILLLKSLQDCG 1160
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 87/231 (37%), Gaps = 3/231 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Y+ + AG+ D Y ++ + + E+ L E R L TP
Sbjct: 935 NFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGL--TPK-LQ 991
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
YK L + K+ + + F +M+ K + S+Y ++ + + AE L
Sbjct: 992 SYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVM 1051
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+E G+ + L+ Y G + V+ S+K++ L +S + + + K Y
Sbjct: 1052 KEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFDAYLKNGDY 1111
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+K ++ G P + I A + A + +Q GFD
Sbjct: 1112 DLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQDCGFD 1162
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 115/228 (50%), Gaps = 1/228 (0%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E R TP Y ++ + + + GR + ++F +++ G + Y ++ +
Sbjct: 17 EMRDKGCTPDIV-TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTA 75
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ AEEL E +KG ++ F L+ +G+VE LEV+E + +
Sbjct: 76 ERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSY 135
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ F K++ A+ + ++S+GC P V+Y +++ A CR G A ++ +++
Sbjct: 136 NPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 195
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
KG +++Y++++ K G+ ++A+ L+ +M KG +P++ Y+++
Sbjct: 196 KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 243
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V+VNG + A++ + L S GC P V+Y ++ C + AE++ EM QK
Sbjct: 32 VVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 91
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ- 288
G VV ++ +++ + G + A+ ++ ++ GC PN YN L+ + K + +
Sbjct: 92 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA 151
Query: 289 ---------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ Y T+++A + E D+ V+ ++ + G
Sbjct: 152 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 197
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 99/224 (44%), Gaps = 16/224 (7%)
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
K A +L E +KG D+ + +V +EG V+ +E ++++ + + ++
Sbjct: 9 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 68
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+ G + A ++ ++ +GC P VT+ +I+ CR GL A +V ++ + G
Sbjct: 69 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 128
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN------ 285
++Y+ ++ + K ++ AM + M +GC P++ YN+L+ R+
Sbjct: 129 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 188
Query: 286 -LRQLE---------KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
L QL+ Y TVI A + ++ NE G
Sbjct: 189 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 232
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 3/227 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L E++ G +S Y ++ AF K +K A SR P Y
Sbjct: 114 EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC--YPDIVS-Y 170
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L +L +SG ++ +K+KG Y ++I + K A EL E
Sbjct: 171 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 230
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ D+ + + E +E + +++ + + + I+ G KRR +
Sbjct: 231 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 290
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
A+ ++ +I GC+P + TY +I GL +A + E+ +G
Sbjct: 291 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 337
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
KR Y A+K+ +++ +GC P VTY ++N C+ G A + + G + V
Sbjct: 4 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 63
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+Y+ ++ R DA L+ +M KGC PNV +N L+
Sbjct: 64 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 104
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 95/225 (42%), Gaps = 6/225 (2%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + +L L + G L+ + + G + Y L+ +F ++ A
Sbjct: 94 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 153
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN---AELNISDCISCVIVN 173
+G D+ + L+ G V+ +E++ +K+ A + IS +++
Sbjct: 154 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS---YNTVID 210
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G +K A+++ +++S+G P +TY++I CR A + F ++Q G
Sbjct: 211 GLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP 270
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y++++ K A+ L A M GC PN Y L++
Sbjct: 271 NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE 315
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
A C+ Y +A K+ EM+ KG +V Y+ +V + GR+ DA+ + + GCEP
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 269 NVWIYNSLM 277
N YN ++
Sbjct: 61 NTVSYNIVL 69
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 126/298 (42%), Gaps = 60/298 (20%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+C G+ R F+ L+ F MK+ Y +++ ++ +A + +K E G
Sbjct: 92 ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIG 151
Query: 126 M---LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ + L V +K + +G V+
Sbjct: 152 LPPTVASLNVLIKALCR--NDGTVD----------------------------------- 174
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +K++ ++ +GC P TY ++I+ CR G +A+K+F EM +K VV Y+S++
Sbjct: 175 AGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI 234
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------ 290
+ + +AMR + +MK KG EPNV+ Y+SLMD G K+ R L+
Sbjct: 235 NGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD--GLCKDGRSLQAMELFEMMMARG 292
Query: 291 ------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YTT+I+ ++ V+ + + G D + G ++ F +S+ E
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFRE 350
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 10/238 (4%)
Query: 51 RKLDLTPSSTHM---YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFAS 107
R++ L P+ + K LC + G LK F +M ++G D Y +LI
Sbjct: 148 REIGLPPTVASLNVLIKALCRNDGTVDAG---LKIFLEMPKRGCDPDSYTYGTLISGLCR 204
Query: 108 IAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI 167
+ A++LF E EK + + L+ V++ + +E MK+ + +
Sbjct: 205 FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFT 264
Query: 168 SCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
+++G K A++++E ++++GC P VTY ++I C+ +A ++ M
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+G Y +++ + + R+A + +M G PN +N +H + N
Sbjct: 325 LQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN----IHVKTSN 378
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 9/212 (4%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + Y E+MKS GI + Y +M+ K G S + LF +R P+
Sbjct: 242 NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR--GCRPNMV- 298
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L L K + E ++ M +G+ D +Y +I F +I++ + A E
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Query: 122 EEKGMLRD---LEVFLKL---VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
G+ + + +K V+ + + + SM++ +++ +V
Sbjct: 359 ILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCL 418
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
K+ + AV++ +++++ GCIP + T+ +I
Sbjct: 419 CKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>gi|356567150|ref|XP_003551784.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 875
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 133/284 (46%), Gaps = 6/284 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ E+M +AG + D Y +++ G + L E E + + + Y D
Sbjct: 282 FLEEMIAAGCLPDRLTYNSLLKTCVAKGRWQLCRDLLAEMEWKGIG---RDVYTYNTYVD 338
Query: 69 SLGKSGRAFEILKFFRD--MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+L K GR ++ + D M K IL + Y++L+ ++ + A ++ E + +
Sbjct: 339 ALCKGGR-MDLARHAIDVEMPAKNILPNVVTYSTLMAGYSKAERFEDALNIYDEMKHLLI 397
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + LV +Y G E+ + + M+ + ++ G+ + Y K
Sbjct: 398 RLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVTYNALIEGYGRHNKYVEVRK 457
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++ ++ P +TY+++I Y + +Y++A V+ E++Q+G VV YS+++
Sbjct: 458 LFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFYSALIDALC 517
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
K G I ++RL+ M KG PNV YNS++D + L LE
Sbjct: 518 KNGLIESSLRLLDVMTEKGSRPNVVTYNSIIDAFRIGQQLPALE 561
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 109/246 (44%), Gaps = 21/246 (8%)
Query: 99 ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+++I + + ++++A LF+E+ +G + F ++ + + ++ SM N
Sbjct: 193 SNMIRTLGRLKKIELALNLFEESRNRGYGNTVYSFSAMISALGRNDCFSEAVSLLRSMGN 252
Query: 159 AELNISDCISCVIVNGFSKRR-AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
L + I++ +K + VK E++I+ GC+P ++TY S++ G +
Sbjct: 253 FGLEPNLVTYNAIIDAGAKGELPFEIVVKFLEEMIAAGCLPDRLTYNSLLKTCVAKGRWQ 312
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV-AKMKPKGCEPNVWIYNSL 276
+ EM+ KG + V Y++ V K GR+ A + +M K PNV Y++L
Sbjct: 313 LCRDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNILPNVVTYSTL 372
Query: 277 MDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
M + Y+ A F+ + Y+E + +DR +VG+++
Sbjct: 373 M-------------------AGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYAN 413
Query: 337 LSQIEE 342
L EE
Sbjct: 414 LGWFEE 419
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 115/296 (38%), Gaps = 51/296 (17%)
Query: 63 YKILCDSLGKSGRAFEIL-KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D+ K FEI+ KF +M G L D Y SL+ + + ++ +L E
Sbjct: 262 YNAIIDAGAKGELPFEIVVKFLEEMIAAGCLPDRLTYNSLLKTCVAKGRWQLCRDLLAEM 321
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E KG+ RD+ + V + G ++ ++
Sbjct: 322 EWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDV-------------------------- 355
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
++ ++ +P VTY++++ Y + + A ++ EM+ V+Y+++
Sbjct: 356 --------EMPAKNILPNVVTYSTLMAGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTL 407
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------- 291
V +Y G +A+ +M+ G + +V YN+L++ +GR ++ K
Sbjct: 408 VGLYANLGWFEEAVGKFKEMECCGIKNDVVTYNALIEGYGRHNKYVEVRKLFDEMKARRI 467
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
Y+T+I Y R + + Y E + G D ++ K IE
Sbjct: 468 YPNDLTYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFYSALIDALCKNGLIE 523
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 127/284 (44%), Gaps = 12/284 (4%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
S L + M+ +GIV D+ Y ++ +K ++ A+ E R P+
Sbjct: 60 SIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHE--MRDHGCEPNVV-T 116
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L K+ + F MK Y +L+ +++ A LF+E
Sbjct: 117 YNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEML 176
Query: 123 EKGMLRDLE--------VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
++ D++ + L+ + V + +E++ESMK + ++V+G
Sbjct: 177 DRRS-HDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDG 235
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K AA +V +++ GC+P VTY S+++ CR S A + +M +G
Sbjct: 236 LCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPN 295
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
VV Y +++ K GR++DA ++A M KG P++ IYN L++
Sbjct: 296 VVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLIN 339
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 149/342 (43%), Gaps = 28/342 (8%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ F + G+ ++ F E S+ +L P+ + IL D L K+ R+ + L+ FR
Sbjct: 12 YAALLRGFCRGGEIDQAQRCFDEMRSK--NLVPN-VFLCSILIDGLCKAKRSIDALRCFR 68
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M+ GI+ D +Y +L+ + A + E + G ++ + L+ +
Sbjct: 69 AMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNN 128
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG-------CI 197
++ E+ E MK+ E + S +++G + A+ ++++++ + C
Sbjct: 129 EPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCS 188
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P +TY+ +I+ C+ S+A ++ M+ +G V+ Y+ +V K ++ A +
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLR----------------QLEKYTTVISAY-N 300
+ +M GC PN+ YNSL+ RA+ + + Y T+I
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308
Query: 301 MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ R D C + GG D + +++ K Q++E
Sbjct: 309 VGRVKDACAMLADMID-KGGTPDLMIYNMLINGLCKADQVDE 349
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 111/272 (40%), Gaps = 11/272 (4%)
Query: 19 VLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+LD+GC Y ++ + AL + R TP+ Y L D L K
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGC--TPNVV-TYGTLIDGLCK 308
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR + DM +KG D +Y LI +V + L + A G+ D+
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ +++ ++ +K+ + +++G K A +YE +
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMA 428
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
GC VTY+++I+ C+ G +A + M + G + Y+S++ +
Sbjct: 429 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 488
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+A+ LV +M+ C P+ YN L +HG +
Sbjct: 489 EAIELVEEMERSNCAPSAVTYNIL--IHGMCR 518
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 8/249 (3%)
Query: 15 SAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSG 74
S GI D Y ++ + ++ L L +SR P +Y L D L K+G
Sbjct: 359 SGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG---CPPDVILYSTLIDGLCKAG 415
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+ E + M G D Y++LI V A L G +
Sbjct: 416 KVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYN 475
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ---- 190
L+ + +++ +E+VE M+ + S ++++G + +AV + EQ
Sbjct: 476 SLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKAR 535
Query: 191 -LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + G + Y+S+I+ C+ G ++A F EM G + YS ++ K+
Sbjct: 536 CVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSK 595
Query: 250 RIRDAMRLV 258
+ + LV
Sbjct: 596 DLHELRHLV 604
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 37/125 (29%)
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK-------------------------- 229
C P TYA+++ +CR G +A++ F EM+ K
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 230 ---------GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
G V Y+++++ K R+ A+ ++ +M+ GCEPNV YNSL+D
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLID-- 122
Query: 281 GRAKN 285
G KN
Sbjct: 123 GLCKN 127
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 68/150 (45%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ + G +++ + M++ L + + ++++G K + A++ +
Sbjct: 8 DVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCF 67
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ G + V Y ++++ + +A + EM+ G + VV Y+S++ K
Sbjct: 68 RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A L MK C P++ YN+L+D
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLD 157
>gi|255660952|gb|ACU25645.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 376
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 111/223 (49%), Gaps = 2/223 (0%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S + I+ L +G+ E++ + MKE G +ED Y L+ F + + +
Sbjct: 58 SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVL 117
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ AE+KG + D + ++ +E +++ L V+ M + + + ++NG +
Sbjct: 118 EMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGA 177
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A++V+ ++ + C P +TY ++IN C+ ++ +A + E+ KG D V+ Y
Sbjct: 178 SKFEDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITY 237
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
S ++ ++ A++L ++ KG +P+V ++N L +HG
Sbjct: 238 SMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNIL--IHG 278
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 123/268 (45%), Gaps = 19/268 (7%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ ++++ E + D VY +++ + +A++K EL++ +G R + F ++
Sbjct: 11 RVYKELVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSSFNIMMRGL 69
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G V++ + + E MK + + D I+ ++V+GF K ++ V E +G +
Sbjct: 70 FDNGKVDEVISIWELMKESGF-VEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLD 128
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
Y+++IN C+ +A V M + G V Y++++ + DA+R+
Sbjct: 129 AFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFR 188
Query: 260 KMKPKGCEPNVWIYNSLMD------MHGRAKNLRQ--LEK--------YTTVISAYNMAR 303
+M C P + YN+L++ M G A NL + L+K Y+ ++ +
Sbjct: 189 EMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDH 248
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
+ + ++ +N+ G D M I++
Sbjct: 249 KVERALQLWNQVTSKGFKPDVQMHNILI 276
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ AE ++KE E + D V+ ++ Y ++ E+ E M +E N S
Sbjct: 4 GDIDGAERVYKELVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWE-MMGSEGNRSVSSF 62
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ G + ++E + G + +TY +++ +C+ G K+ V +Q
Sbjct: 63 NIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KG AYS+M+ K + A+ ++ M GC+PNV +YN+L++
Sbjct: 123 KGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLIN 172
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 105/252 (41%), Gaps = 9/252 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH E + G VLD+ Y ++ K + ++ AL + K P+ H+Y L
Sbjct: 114 LHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDR--ALSVLNGMIKSGCKPN-VHVYNTL 170
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSV---YASLICSFASIAEVKVAEELFKEAEE 123
+ L + + + ++ FR+M G + P Y +LI A L KE +
Sbjct: 171 INGLAGASKFEDAIRVFREM---GTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLD 227
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ + + L+ + VE+ L++ + + + ++++G
Sbjct: 228 KGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQL 287
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ +Y + C P V++ +++ + + G A ++ + + G + +++Y+ +
Sbjct: 288 ALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLK 347
Query: 244 MYGKTGRIRDAM 255
RI DA+
Sbjct: 348 GLCSCKRISDAI 359
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 140/326 (42%), Gaps = 20/326 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E G LD Y ++ A + G E+ LF E R+ + P+ Y ++ D
Sbjct: 163 ETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAEL--RRQGVAPTLV-TYNVVLDVY 219
Query: 71 GKSGRAFE-ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ GR++ I+ +M+ G+ D +++I + V A F++ + +G
Sbjct: 220 GRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPC 279
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ ++ + G + L V+ M+ + +++ + A + +
Sbjct: 280 VVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLD 339
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ S+G +P TY +++ AY +G +A +F +M++ GF V Y+ ++ M GK
Sbjct: 340 TMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKS 399
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------KNLRQL------EKYT 293
R + ++ +M GC PN +N+++ + G+ + +R + Y
Sbjct: 400 RFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYN 459
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNG 319
T+I+AY K YNE G
Sbjct: 460 TLIAAYGRCGSRTNAFKMYNEMTSAG 485
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 137/333 (41%), Gaps = 42/333 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M+S G+ L Y ++ A+ + G ++ E S TP T Y L + L
Sbjct: 444 EGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTS--AGFTPCIT-TYNALLNVL 500
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFAS----------------------- 107
+ G M+ KG + Y+ L+ +A
Sbjct: 501 SRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPS 560
Query: 108 --------IAEVKVA-----EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
IA K E F+E + +G DL +F ++ +Y + GM K EV +
Sbjct: 561 WVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFD 620
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL-ISQGCIPGQVTYASIINAYCRI 213
S+K + L+ +++ ++K W A K+ QL SQ P V+Y ++IN +C+
Sbjct: 621 SIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQ 680
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
GL +A++V EM G C V Y ++V Y +A ++ M G +P Y
Sbjct: 681 GLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTY 740
Query: 274 NSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
+++ + RAK + + + +S ++ +FD
Sbjct: 741 RRVVESYCRAKRFEEARGFLSEVSETDL--DFD 771
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 108/229 (47%), Gaps = 17/229 (7%)
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA-VKV 187
D+ + ++ G E+ LE+ ++ + + V+++ + + W V +
Sbjct: 173 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVAL 232
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++ + G P T +++I A CR GL +A F +++ +G CVV Y++++ ++GK
Sbjct: 233 LDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGK 292
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------------- 291
G +A+R++ +M+ GC+P+ YN L + RA + +
Sbjct: 293 AGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFT 352
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y TV++AY + D + +++ + G V + +++G+ K S+
Sbjct: 353 YNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRF 401
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 127/311 (40%), Gaps = 38/311 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M++AG+ D ++ A + G ++ A F + ++R Y L
Sbjct: 234 DEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARG---HAPCVVTYNALLQVF 290
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK+G E L+ +M++ G D Y L ++A + A KG+L +
Sbjct: 291 GKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNA 350
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ Y G V++ L + + MK + +++ K+ + +++ +
Sbjct: 351 FTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGE 410
Query: 191 LISQGCIPGQVT-----------------------------------YASIINAYCRIGL 215
+ GC P +VT Y ++I AY R G
Sbjct: 411 MSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGS 470
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+ A K++ EM GF C+ Y++++ + + G A +V+KM+ KG +PN Y+
Sbjct: 471 RTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSL 530
Query: 276 LMDMHGRAKNL 286
L+ + + N+
Sbjct: 531 LLQCYAKGGNV 541
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 13/255 (5%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS--- 58
N L +M+ G D+ Y ++ + + G F E +R LD S
Sbjct: 295 NYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAG--------FFEEAARCLDTMASKGL 346
Query: 59 --STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
+ Y + + G G+ E L F MK+ G + + + Y ++ + V E
Sbjct: 347 LPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLE 406
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ E G + + ++ + + GM + V+E M++ + +S ++ +
Sbjct: 407 MLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYG 466
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ + A K+Y ++ S G P TY +++N R G +S A+ + +M+ KGF
Sbjct: 467 RCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQ 526
Query: 237 AYSSMVAMYGKTGRI 251
+YS ++ Y K G +
Sbjct: 527 SYSLLLQCYAKGGNV 541
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/338 (18%), Positives = 160/338 (47%), Gaps = 23/338 (6%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM-----YKILCDSLGKSG 74
LDS +++ +K+G S + + LF R L H+ Y + G
Sbjct: 30 LDSRALAALLKELHKVGLSNRASELFDWL--RSLPDNHELAHLCDVYTYTTIISQCGSHQ 87
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+ + L+ +M+ G++ + Y++L+ E+++A +++ + +G +L +
Sbjct: 88 QLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYN 147
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ ++ + G ++ ++V++++++ I++ ++ A++VYE++++
Sbjct: 148 ILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLAD 207
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G P TY ++I+AY + G +A ++F +M ++G ++ V+ YSS+++ K GR + A
Sbjct: 208 GAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLA 267
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE----------------KYTTVISA 298
+ L+ +M C+PN +N+L+ + + + Y +ISA
Sbjct: 268 LELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISA 327
Query: 299 YNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
++ ++ ++ +E + G D + +++ ++
Sbjct: 328 FDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTR 365
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 130/279 (46%), Gaps = 7/279 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +M+ G+V + Y +M K + E AL + + + TP+ Y IL
Sbjct: 93 LELVAEMRGHGVVCNVHTYSALMNVCIKANELE--LALDVYGQLLREGCTPNLV-TYNIL 149
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D GK G E ++ ++++G + Y +++ + + + A +++ G
Sbjct: 150 IDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGA 209
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAA 184
+ L+ Y + G +E+ L + + M + E N+ S +++ K + A
Sbjct: 210 QPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSS--LISACEKAGRWQLA 267
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++ +++ C P VT+ ++++A + G + A+ VF +M G V+Y+ +++
Sbjct: 268 LELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISA 327
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ + + A++ + +M+ +G P+V +YN +++ R+
Sbjct: 328 FDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRS 366
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 6/243 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q + + ++ G + Y I+ A + G E ++ E D +
Sbjct: 158 NWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVY---ERMLADGAQPTAT 214
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L + GK+G+ E L+ F+DM +G + Y+SLI + ++A EL E
Sbjct: 215 TYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEM 274
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ F L+ + G + +V E M + ++++ F + +
Sbjct: 275 HRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQW 334
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS---KAEKVFIEMQQKGFDKCVVAY 238
A++ +++ QG P Y +I A R G+ S KA ++F ++G +C A
Sbjct: 335 CRALQALDEMQGQGHRPDVGVYNVVIEALTRSGVLSAQLKAAQIFQAATRQGQLRCDAAS 394
Query: 239 SSM 241
+++
Sbjct: 395 ANL 397
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 42/268 (15%)
Query: 14 KSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS---L 70
+S G+ D + +++A K + K A+L E R P Y L D +
Sbjct: 168 RSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRALERR----FPPDAVTYNTLADGWCRV 223
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ RA +IL R M E GI + Y ++ F +++ A + F + +++G
Sbjct: 224 KDTSRALDIL---RQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRG----- 275
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
N E D +S +++G A KV++
Sbjct: 276 --------------------------SNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFD 309
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +GC P TY ++I C+ G A VF +M +KG+ VV Y+ ++ G
Sbjct: 310 EMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAG 369
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+I AM+L+ KMK +GCEPNV YN L+
Sbjct: 370 KIDRAMKLLDKMKREGCEPNVQTYNVLI 397
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 105/270 (38%), Gaps = 44/270 (16%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR-------KLD 54
++ L +M +GI Y I++ F++ G + FL+ + R K D
Sbjct: 225 DTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPD 284
Query: 55 L-------------------------------TPSSTHMYKILCDSLGKSGRAFEILKFF 83
+ TPS Y L K G + + F
Sbjct: 285 VVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIA-TYNALIQVTCKKGNVEDAVAVF 343
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
DM KG + + Y LI ++ A +L + + +G +++ + L+ EE
Sbjct: 344 DDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEE 403
Query: 144 GMVEKTLEVVESMKNAE--LNISDCISCVIVNGFSKRRAYWAAV--KVYEQLISQGCIPG 199
G +EK L + E+M E L D + +I F ++RA AV ++ +++ +G +P
Sbjct: 404 GDIEKALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPR 463
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+ + ++N G + + + MQ+K
Sbjct: 464 RFMFNRVLNGLMLTG-NQELSRELLRMQEK 492
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 63/150 (42%), Gaps = 24/150 (16%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P VTY ++ + +CR+ S+A + +M + G Y+ ++ + ++G+++ A
Sbjct: 208 PDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDF 267
Query: 258 VAKMKPKG-----CEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFY 312
+MK +G C+P+V YTTV+ +A + D K +
Sbjct: 268 FLQMKKRGSNDENCKPDVV-------------------SYTTVLHGLGVAGQLDKARKVF 308
Query: 313 NEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+E G A ++ V K +E+
Sbjct: 309 DEMSREGCTPSIATYNALIQVTCKKGNVED 338
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 5/219 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL D L K R E + F + + G+ D Y I V+ A + K+ +
Sbjct: 296 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 355
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
EKG + D+ ++ +E V++ EV+ S A+ + IS ++ G + +
Sbjct: 356 EKGCVPDVVSHNAVINGLCKEKRVDEA-EVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 414
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRI---GLYSKAEKVFIEMQQKGFDKCVVAY 238
A+ +++++ +G P VTY +++ C+ G +A +F M +KG VV Y
Sbjct: 415 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 474
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
S+++ GK G++ DA RL+ M+ KGC PNV+ YNSL+
Sbjct: 475 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 513
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 4/229 (1%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
K L P + Y + D L K+GR + L +DM EKG + D + ++I V
Sbjct: 321 KHGLEPDAI-TYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRV 379
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
AE L E KG + F L+ G +K + + M + + ++
Sbjct: 380 DEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNIL 439
Query: 172 VNGFSKRRAYW---AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
V+G K R A+ +++ +I +G +P VTY+++I+ + G A ++ M+
Sbjct: 440 VDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEA 499
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
KG V Y+S+++ ++ +A+ L M KGC P+ Y +++
Sbjct: 500 KGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTII 548
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 5/240 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L + E LK F + +G + Y LI V A ELF
Sbjct: 261 YNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLV 320
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
+ G+ D + + + G VE L +++ M + + + D +S ++NG K +
Sbjct: 321 KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM-DEKGCVPDVVSHNAVINGLCKEKRV 379
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + + ++GC P +++ ++I CR G + KA F EM ++G VV Y+ +
Sbjct: 380 DEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNIL 439
Query: 242 VAMYGKT---GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
V K GRI++A+ L M KG P+V Y++L+D G+A L + + A
Sbjct: 440 VDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEA 499
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 10/228 (4%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPS--VYASLICSFASIAEVKVAEELFKEAE 122
IL SL KSG+ + +F + KG+ + + +Y S +C + I + A+ +F
Sbjct: 21 ILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGD---AQTVFDGMR 77
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G + + L+ G + + E M A + +++GF K
Sbjct: 78 KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLD 137
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+K+++ + +G +P VTY ++IN +C+ +A+++ M + VV Y+S+V
Sbjct: 138 EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLV 197
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
K GR+ +A L+ KG PNV Y++L + G + LR+LE
Sbjct: 198 NGLCKNGRVDEARMLIVD---KGFSPNVITYSTL--ISGLCRELRRLE 240
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 125/308 (40%), Gaps = 38/308 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--------------------CE 49
YE+M AG D Y ++ F K+G ++ +F C+
Sbjct: 108 YERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCK 167
Query: 50 SRKLD-------------LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
+ KLD L P Y L + L K+GR E D KG +
Sbjct: 168 ADKLDEAQRILQRMVSESLVPDVV-TYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVI 223
Query: 97 VYASLICSFA-SIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
Y++LI + ++ A +L ++ G D+ + L+ E V + L++ S
Sbjct: 224 TYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGS 283
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
+ ++++G K A +++ L+ G P +TY I+ C+ G
Sbjct: 284 VLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 343
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
A + +M +KG VV++++++ K R+ +A L++ M+ KGC PN +N+
Sbjct: 344 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 403
Query: 276 LMDMHGRA 283
L+ RA
Sbjct: 404 LICGQCRA 411
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 123/289 (42%), Gaps = 7/289 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M S +V D Y ++ K G ++ L ++ +P+ Y L L
Sbjct: 179 QRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD-----KGFSPNVI-TYSTLISGL 232
Query: 71 GKSGRAFEILK-FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ R E + M G D Y +LI A V A +LF +G +
Sbjct: 233 CRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPE 292
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ ++E V + E+ + L V ++G K A+ + +
Sbjct: 293 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 352
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ +GC+P V++ ++IN C+ +AE + M+ KG +++++++ + G
Sbjct: 353 DMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAG 412
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
+ + AM +M +G +P V YN L+D +A+ ++++ T+ A
Sbjct: 413 KWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA 461
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 65/122 (53%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+ ++G + A V++ + G P ++TY ++++ C G S A+ ++ M +
Sbjct: 55 IYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKA 114
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G+ VV Y++++ + K G++ +A+++ +G P+V YN+L++ +A L +
Sbjct: 115 GYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEA 174
Query: 290 EK 291
++
Sbjct: 175 QR 176
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI---CSFASIAEVK 112
+P++ ++C ++G+ + + F++M ++G+ Y L+ C +K
Sbjct: 395 SPNAISFNTLICGQC-RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 453
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-- 170
A LF EKG + D+ + L+ + G ++ ++ +M+ CI V
Sbjct: 454 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME-----AKGCIPNVYT 508
Query: 171 ---IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
+++G A++++ ++ +GC+P +TY +II+A C+ + KA +F
Sbjct: 509 YNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSL 568
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
+ G Y S++ R+ +A++L+
Sbjct: 569 EAGVVPTSGMYFSLIDGLCAVARVDEALKLL 599
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 136/307 (44%), Gaps = 36/307 (11%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDL-TPSSTHMY 63
+ L +Y ++KS + + ++ + S ALF + +L L T + M
Sbjct: 68 TSLRFYAQLKSLSVPIPVASLHPLLSSL----PSAPAFALFADIYRLRLPLCTTTFNIML 123
Query: 64 KILCDSLGKSGRAFEILK----------------------------FFRDMKEKG-ILED 94
+ LC + GK RA E+L+ R+M+E+G I D
Sbjct: 124 RHLC-ATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPD 182
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV-FLKLVLMYIEEGMVEKTLEVV 153
YA+LI + I ++ A ++F E +G + V + L+ Y + G ++ L+
Sbjct: 183 KYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYR 242
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
E M + ++ ++V+ A V E++ G P TY +IN YC+
Sbjct: 243 EDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKE 302
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G KA +VF EM +KG V Y+S++ + + G++++ RL KG P+V +Y
Sbjct: 303 GNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMY 362
Query: 274 NSLMDMH 280
N+L++ H
Sbjct: 363 NALINSH 369
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 128/270 (47%), Gaps = 3/270 (1%)
Query: 4 QSKLHYYEKMKS-AGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
Q+ L +M+ GI D Y ++ + KIG E A +F E ++ ++ PS+ M
Sbjct: 164 QAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQG-EVAPSAV-M 221
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L G+ L++ DM ++G+ + Y L+ + A + +E +
Sbjct: 222 YNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQ 281
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ + L+ Y +EG +K LEV E M + + ++ FS++
Sbjct: 282 RNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQ 341
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++++ + +G P V Y ++IN++C G +A ++ EM++K V Y++++
Sbjct: 342 ETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLI 401
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
+ GR+ +A L+ +M +G +P++ +
Sbjct: 402 RGFCLLGRLDEARGLIDEMTKRGIQPDLGL 431
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 112/237 (47%), Gaps = 1/237 (0%)
Query: 42 AALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV-YAS 100
AAL + E R+ + Y L K GR + K F +M +G + +V Y +
Sbjct: 165 AALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNA 224
Query: 101 LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE 160
LI + ++ VA + ++ ++G+ + + LV +G V+E M+
Sbjct: 225 LIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNG 284
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAE 220
L+ +++NG+ K A++V+E++ +G VTY S+I A+ R G + +
Sbjct: 285 LSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETD 344
Query: 221 KVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++F +KG VV Y++++ + G + A ++A+M+ K P+ YN+L+
Sbjct: 345 RLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLI 401
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 29/287 (10%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L + + MK G V D+ CY +++ GD E+ A L E + +L ST
Sbjct: 364 EDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLER--AHTLRSEMLQNNLVLDSTTQT 421
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEA 121
++C L K G E ++ F +M E G DP+V Y +LI F ++ A LF +
Sbjct: 422 IMIC-GLCKRGLVDEAMQIFDEMGEHGC--DPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E M + +FL+L L + E ++V M C S ++ +
Sbjct: 479 E---MGNNPSLFLRLTLGANQVCDSESLRKLVHDM---------CQSGQVLKAY------ 520
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
K+ +I G +P VTY ++IN C+ A ++F E+Q KG + Y ++
Sbjct: 521 ----KLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ + R DAM L + G P++ IYNS+M R K L Q
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQ 623
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 120/286 (41%), Gaps = 6/286 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y +M +AG + Y +M+ K G + +F E R + P+ +Y +L
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI--MPN-VKIYTVL 248
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
SL +G+ E ++ MK+KG L D Y + + + V A + ++ G
Sbjct: 249 LSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGF 308
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L+ + L+ + ++ ++M ++ + +++ G ++ A+
Sbjct: 309 ALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALS 368
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + +G +P Y +++ C G +A + EM Q + M+
Sbjct: 369 FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC 428
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
K G + +AM++ +M GC+P V YN+L+D GR + R L
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARML 474
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 17/259 (6%)
Query: 100 SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA 159
SL+ +S A+ + + L +A G+ F LV + G ++ M
Sbjct: 108 SLLLRLSSHADEAMFDAL-ADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEF 166
Query: 160 ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
+ + + I+ A+ +Y ++++ GC P + TY +++ C+ G+ A
Sbjct: 167 QSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDA 226
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD- 278
K+F EM +G V Y+ +++ G+I +A++L+ MK KGC P+ YN+ +
Sbjct: 227 LKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSG 286
Query: 279 --MHGRAKNLRQ-------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
GR Q L+ Y+ +I AR FD +Y D
Sbjct: 287 LCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346
Query: 324 RAMAGIMVGVFSKLSQIEE 342
+ IM+ ++ +IE+
Sbjct: 347 VVLYTIMIRGCAEAGRIED 365
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 118/282 (41%), Gaps = 32/282 (11%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L ++ R E +++ M E+ I D +Y +I A ++ A +
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+KG + D + ++ + + G +E+ + M L + +++ G KR
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVD 434
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV------ 236
A+++++++ GC P +TY ++I+ + R G +A +F +M+ +
Sbjct: 435 EAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGA 494
Query: 237 -------AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+ +V ++G++ A +L+ + G P+V YN+L++ +A+NL
Sbjct: 495 NQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNL--- 551
Query: 290 EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
D V+ + E ++ G D G ++
Sbjct: 552 ----------------DGAVRLFKELQLKGISPDEITYGTLI 577
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 112/272 (41%), Gaps = 41/272 (15%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P+S+ + L + +GR + ++ F M E VY +++ + + +A
Sbjct: 134 PASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALA 193
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L+ G + + L+ ++GM L++ + M + + + I V+++
Sbjct: 194 LYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLC 253
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF----- 231
AV++ + +GC+P +VTY + ++ C++G ++A + + +Q GF
Sbjct: 254 NAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLK 313
Query: 232 ------------------------------DKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
VV Y+ M+ + GRI DA+ + M
Sbjct: 314 GYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVM 373
Query: 262 KPKGCEPNVWIYNSLMDM---HG---RAKNLR 287
K KG P+ + YN+++ + HG RA LR
Sbjct: 374 KKKGFVPDTFCYNTVLKVLCDHGDLERAHTLR 405
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 102/230 (44%), Gaps = 4/230 (1%)
Query: 50 SRKLDLTPSSTHMYKILCDSLGKSGRAFE-ILKFFRDMKEKGILEDPSVYASLICSFASI 108
S +L P H +L L S A E + D + G+ S +A+L+ + +S
Sbjct: 94 SPRLRSRPLHAHAVSLL---LRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSA 150
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
A + F +E V+ ++ ++ G++ L + M A +
Sbjct: 151 GRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATY 210
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
V+++G K+ A+K++++++ +G +P Y ++++ C G +A ++ M+
Sbjct: 211 NVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKD 270
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KG V Y++ ++ K GR+ +A + + ++ G + Y+ L+D
Sbjct: 271 KGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLID 320
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 5/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ +++M++ GI + Y ++ G + L + +K++ + + L
Sbjct: 204 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN---PNLVTFNAL 260
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K G+ E K DM ++ I D Y SLI F + A+++F+ K
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAV 185
DL+ + L+ + + VE E+ M + L + D ++ ++ G A
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL-VGDTVTYTTLIQGLFHDGDCDNAQ 379
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
KV++Q++S G P +TY+ +++ C G KA +VF MQ+ + Y++M+
Sbjct: 380 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 439
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++ D L + KG +PNV YN+++
Sbjct: 440 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 471
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 3/254 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ K GD + L + E+ K++ + ++ + DSL K + L F+
Sbjct: 152 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIE---ADVVIFNTIIDSLCKYRHVDDALNLFK 208
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M+ KGI + Y+SLI S A +L + EK + +L F L+ +++EG
Sbjct: 209 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 268
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ ++ + M ++ ++NGF A +++E ++S+ C P TY
Sbjct: 269 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 328
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++I +C+ ++F EM +G V Y++++ G +A ++ +M
Sbjct: 329 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 388
Query: 265 GCEPNVWIYNSLMD 278
G P++ Y+ L+D
Sbjct: 389 GVPPDIMTYSILLD 402
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 145/327 (44%), Gaps = 18/327 (5%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ +++ A K+ + V +L L + KL PS + +L + R + +
Sbjct: 45 FNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLL-NGYCHGKRISDAVALVD 103
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M E G D + +LI + A L ++G +L + +V + G
Sbjct: 104 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 163
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ ++ M+ A++ I I++ K R A+ +++++ ++G P VTY+
Sbjct: 164 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 223
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+I+ C G +S A ++ +M +K + +V +++++ + K G+ +A +L M +
Sbjct: 224 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 283
Query: 265 GCEPNVWIYNSLMD---MHGRAKNLRQ-------------LEKYTTVISAYNMAREFDMC 308
+P+++ YNSL++ MH R +Q L+ Y T+I + ++ +
Sbjct: 284 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 343
Query: 309 VKFYNEFRMNGGVIDRAMAGIMV-GVF 334
+ + E G V D ++ G+F
Sbjct: 344 TELFREMSHRGLVGDTVTYTTLIQGLF 370
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 35/220 (15%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L KS R + + FR+M +G++ D Y +LI + A+++FK+
Sbjct: 327 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 386
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ + L+ G +EK LEV + M+ +E+ +
Sbjct: 387 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD------------------ 428
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+Y Y ++I C+ G +F + KG VV Y++M+
Sbjct: 429 ----IY-------------IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 471
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+ +++A L+ KMK G P+ YN+L+ H R
Sbjct: 472 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 511
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
+++M S G+ D Y +++ G EK +F ++ KLD+ ++Y +
Sbjct: 382 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI-----YIYTTMI 436
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ + K+G+ + F + KG+ + Y ++I S ++ A L K+ +E G L
Sbjct: 437 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 496
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
D + L+ ++ +G + E++ M++
Sbjct: 497 PDSGTYNTLIRAHLRDGDKAASAELIREMRS 527
>gi|357436523|ref|XP_003588537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477585|gb|AES58788.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 653
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 133/324 (41%), Gaps = 44/324 (13%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFY---KIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+KMK +G +G Y +++ + K G++ K+ L L + K DL Y +L
Sbjct: 168 QKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLMLTDGNSKPDL-----QTYNMLI 222
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+L +SG E M G+L D + ++ + +E AE + E + KG+
Sbjct: 223 KALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEMQRKGLE 282
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ F +V Y +EG +++ L+ V +K+ + + V++NGF R +
Sbjct: 283 PNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGVDEF 342
Query: 188 YEQLISQG-----------------CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+G P VTY++I+NA+ + G K +++F M Q G
Sbjct: 343 SNTFAQEGKNQVTTPLVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSG 402
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
V AYS +V Y ++ A L+ M G PNV
Sbjct: 403 VKPDVHAYSILVKGYVRSMETEKAEELLGDMIESGVRPNVVT------------------ 444
Query: 291 KYTTVISAYNMAREFDMCVKFYNE 314
+T VIS + + D +K +++
Sbjct: 445 -FTNVISGWGSSGRMDNAIKIFDK 467
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 36/232 (15%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F+ + E+G Y SL+ + K L + EEK M + + ++ + E
Sbjct: 97 FKKLIEEGHQPSLITYTSLLHALTMQKCFKSIHSLVSQVEEKQMKTNSIFYNAVINAFAE 156
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG-CIPGQV 201
G +E + V+ MK + S ++ G+ A+K+ + +++ G P
Sbjct: 157 SGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLMLTDGNSKPDLQ 216
Query: 202 TYASIINAYCRIGLYS-----------------------------------KAEKVFIEM 226
TY +I A C+ G S +AE + +EM
Sbjct: 217 TYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEM 276
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Q+KG + ++ +V Y K G+I++A++ V ++K G +PN+ ++N L++
Sbjct: 277 QRKGLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLIN 328
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y ++INA+ G A+K +M++ GF YS+++ YG G+ +AM+L+ M
Sbjct: 147 YNAVINAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLML 206
Query: 263 PKG-CEPNVWIYNSLMDMHGRAKNLRQ 288
G +P++ YN L+ ++ N+ +
Sbjct: 207 TDGNSKPDLQTYNMLIKALCQSGNMSE 233
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+ A +FK+ E+G L + L+ + + +V ++ ++ + +
Sbjct: 91 QAANVIFKKLIEEGHQPSLITYTSLLHALTMQKCFKSIHSLVSQVEEKQMKTNSIFYNAV 150
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+N F++ A K +++ G P TY+++I Y +G +A K+ M G
Sbjct: 151 INAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLMLTDGN 210
Query: 232 DKC-VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
K + Y+ ++ ++G + +A +V KM G P+ +N++
Sbjct: 211 SKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTM 256
>gi|255660962|gb|ACU25650.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 376
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 111/223 (49%), Gaps = 2/223 (0%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S + I+ L +G+ E++ + MKE G +ED Y L+ F + + +
Sbjct: 58 SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVL 117
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ AE+KG + D + ++ +E +++ L V+ M + + + ++NG +
Sbjct: 118 EMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGA 177
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A++V+ ++ + C P +TY ++IN C+ ++ +A + E+ KG D V+ Y
Sbjct: 178 SKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITY 237
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
S ++ ++ A++L ++ KG +P+V ++N L +HG
Sbjct: 238 SMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNIL--IHG 278
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 127/278 (45%), Gaps = 19/278 (6%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ ++++ E + D VY +++ + +A++K EL++ +G R + F ++
Sbjct: 11 RVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSSFNIMMRGL 69
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G V++ + + E MK + + D I+ ++V+GF K ++ V E +G +
Sbjct: 70 FDNGKVDEVISIWELMKESGF-VEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLD 128
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
Y+++IN C+ +A V M + G V Y++++ + DA+R+
Sbjct: 129 AFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFR 188
Query: 260 KMKPKGCEPNVWIYNSLMD------MHGRAKNLRQ--LEK--------YTTVISAYNMAR 303
+M C P + YN+L++ M G A NL + L+K Y+ ++ +
Sbjct: 189 EMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDH 248
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ + ++ +N+ G D M I++ + +I+
Sbjct: 249 KVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQ 286
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ AE ++KE E + D V+ ++ Y ++ E+ E M +E N S
Sbjct: 4 GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWE-MMGSEGNRSVSSF 62
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ G + ++E + G + +TY +++ +C+ G K+ V +Q
Sbjct: 63 NIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KG AYS+M+ K + A+ ++ M GC+PNV +YN+L++
Sbjct: 123 KGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLIN 172
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 102/249 (40%), Gaps = 3/249 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH E + G VLD+ Y ++ K + ++ AL + K P+ H+Y L
Sbjct: 114 LHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDR--ALSVLNGMIKSGCKPN-VHVYNTL 170
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L + + + ++ FR+M Y +LI A L KE +KG+
Sbjct: 171 INGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGL 230
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + VE+ L++ + + + ++++G A+
Sbjct: 231 DPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALS 290
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+Y + C P V++ +++ + + G A ++ + + G + +++Y+ +
Sbjct: 291 LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLC 350
Query: 247 KTGRIRDAM 255
RI DA+
Sbjct: 351 SCNRISDAI 359
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y + D L K+G A E LK +M K + Y L+ S ++ AEE
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
LF+ G + ++ L+ + + G +++ + + M A V+++G
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K + A K +E+++ GC P VTY +II +IG + A ++ M G V
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y ++ + K GR+ +A +L+ ++ PN+ +Y+SL+
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 152/359 (42%), Gaps = 73/359 (20%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M AGI ++ + ++ +F + ++ F E K H + IL D
Sbjct: 142 HEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF---EIMKRKRCKPDLHTFLILVDC 198
Query: 70 LGKSG---RAFEILKFFRDMKEKG-ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L K+G +AFE+ F +M G + D +++ +++ + VK A E+F + E+ G
Sbjct: 199 LCKAGMDEKAFEV---FHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCG 255
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
D + +++G +K A+
Sbjct: 256 FPPDAIAY-----------------------------------NTMIDGLAKAGHAQEAL 280
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
KV + ++++ C+P +VTY ++N+ C+ G +AE++F M GF V Y+S++ +
Sbjct: 281 KVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGF 340
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-------------- 291
K+GR+++A L +M G P+V + ++D ++ N Q K
Sbjct: 341 AKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNV 400
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVI------DRAMAGIMVGVFSKLSQIEE 342
YTT+I + + N FR+ G+I D ++ F KL +++E
Sbjct: 401 VTYTTIIQGLSKIG------RVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 130/321 (40%), Gaps = 41/321 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M AG D + +++ K G+ E+ A F E + P+ Y +
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEE--MMRGGCKPNVV-TYTTIIQG 409
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K GR + + M G D Y L+ F + + A +L E ++ +
Sbjct: 410 LSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPN 469
Query: 130 LEVFLKLVLMYIEEGMVEKTLE-VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
L+++ LV + G VE TL+ + E K A N+ + C I+ G K A +++
Sbjct: 470 LQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIF 529
Query: 189 EQLISQGC-------------------------------------IPGQVTYASIINAYC 211
++++S+GC +P VTY + C
Sbjct: 530 QRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLC 589
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+IG +A K+ E +G++ VVAY+++ G++ A+ L +M +G P+
Sbjct: 590 KIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAA 649
Query: 272 IYNSLMDMHGRAKNLRQLEKY 292
Y +++ + K L K+
Sbjct: 650 AYCCIINGLIKGKKLEDACKF 670
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 121/310 (39%), Gaps = 47/310 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+ K+A LD G C I+ K G ++ +F S P +T Y IL +
Sbjct: 494 FEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE--GCKPDAT-TYNILING 550
Query: 70 LGKSG-----RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L +S RAF +L D++ G L D Y L I EV A ++ +EA +
Sbjct: 551 LCRSRENRVERAFALL---HDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSR 607
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G D+ + L +G V++ + + + M C I+NG K + A
Sbjct: 608 GWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDA 667
Query: 185 VKVYEQLISQGCIPGQVTYASI------------------------------------IN 208
K ++++I +G P TY ++ I+
Sbjct: 668 CKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIH 727
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+C+ A K+F +M +G V +S+ ++G+ A L+ +M G P
Sbjct: 728 GFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPP 787
Query: 269 NVWIYNSLMD 278
+ + +++D
Sbjct: 788 HAATFTAILD 797
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 4/243 (1%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
G + D+ Y + KIG+ ++ + E SR + + Y LC L G+
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN---ADVVAYTALCTGLCYQGQV 629
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
+ F++M +G D + Y +I +++ A + F E KG + + L
Sbjct: 630 DRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTAL 689
Query: 137 VLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
V G V++ E M EL S I +++GF K AA+K++E +IS+G
Sbjct: 690 VQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRG 749
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
+P VT AS+ + R G KA+++ EM G +++++ K+ +
Sbjct: 750 NVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLL 809
Query: 256 RLV 258
+LV
Sbjct: 810 KLV 812
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 113/287 (39%), Gaps = 22/287 (7%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM--YKILCDSL 70
M + G DS Y +++ F K+G ++ A L E LD SS ++ Y L L
Sbjct: 426 MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE-----LDKCSSSPNLQLYSSLVKGL 480
Query: 71 GKSGRAFEILK-FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G L F K DP + S+I + A +F+ +G D
Sbjct: 481 CDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPD 540
Query: 130 LEVFLKLV--LMYIEEGMVEKT------LEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ L+ L E VE+ LE+V + +A CI G K
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCI------GLCKIGEV 594
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AVK+ E+ S+G V Y ++ C G +A +F EM ++G AY +
Sbjct: 595 DRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCI 654
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ K ++ DA + +M KG +P V Y +L+ A N+ +
Sbjct: 655 INGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
E+ G D+ + L+ + + E + + E M A + + +++ F++ R
Sbjct: 110 GEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRR 169
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF---DKCVVA 237
AV +E + + C P T+ +++ C+ G+ KA +VF EM GF D+ +
Sbjct: 170 ADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRAL-- 227
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+++MV K R+++A + +M+ G P+ YN+++D +A + ++
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 29/287 (10%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L + + MK G V D+ CY +++ GD E+ A L E + +L ST
Sbjct: 364 EDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLER--AHTLRSEMLQNNLVLDSTTQT 421
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEA 121
++C L K G E ++ F +M E G DP+V Y +LI F ++ A LF +
Sbjct: 422 IMIC-GLCKRGLVDEAMQIFDEMGEHGC--DPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E M + +FL+L L + E ++V M C S ++ +
Sbjct: 479 E---MGNNPSLFLRLTLGANQVCDSESLRKLVHDM---------CQSGQVLKAY------ 520
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
K+ +I G +P VTY ++IN C+ A ++F E+Q KG + Y ++
Sbjct: 521 ----KLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ + R DAM L + G P++ IYNS+M R K L Q
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQ 623
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 119/286 (41%), Gaps = 6/286 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y +M +AG + Y +M+ K G + +F E R + + +Y +L
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI---MPNVKIYTVL 248
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
SL +G+ E ++ MK+KG L D Y + + + V A + ++ G
Sbjct: 249 LSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGF 308
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L+ + L+ + ++ ++M ++ + +++ G ++ A+
Sbjct: 309 ALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALS 368
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + +G +P Y +++ C G +A + EM Q + M+
Sbjct: 369 FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC 428
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
K G + +AM++ +M GC+P V YN+L+D GR + R L
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARML 474
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 17/259 (6%)
Query: 100 SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA 159
SL+ +S A+ + + L +A G+ F LV + G ++ M
Sbjct: 108 SLLLRLSSHADEAMFDAL-ADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEF 166
Query: 160 ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
+ + + I+ A+ +Y ++++ GC P + TY +++ C+ G+ A
Sbjct: 167 QSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDA 226
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD- 278
K+F EM +G V Y+ +++ G+I +A++L+ MK KGC P+ YN+ +
Sbjct: 227 LKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSG 286
Query: 279 --MHGRAKNLRQ-------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
GR Q L+ Y+ +I AR FD +Y D
Sbjct: 287 LCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346
Query: 324 RAMAGIMVGVFSKLSQIEE 342
+ IM+ ++ +IE+
Sbjct: 347 VVLYTIMIRGCAEAGRIED 365
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 118/282 (41%), Gaps = 32/282 (11%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L ++ R E +++ M E+ I D +Y +I A ++ A +
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+KG + D + ++ + + G +E+ + M L + +++ G KR
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVD 434
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV------ 236
A+++++++ GC P +TY ++I+ + R G +A +F +M+ +
Sbjct: 435 EAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGA 494
Query: 237 -------AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+ +V ++G++ A +L+ + G P+V YN+L++ +A+NL
Sbjct: 495 NQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNL--- 551
Query: 290 EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
D V+ + E ++ G D G ++
Sbjct: 552 ----------------DGAVRLFKELQLKGISPDEITYGTLI 577
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 112/272 (41%), Gaps = 41/272 (15%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P+S+ + L + +GR + ++ F M E VY +++ + + +A
Sbjct: 134 PASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALA 193
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L+ G + + L+ ++GM L++ + M + + + I V+++
Sbjct: 194 LYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLC 253
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF----- 231
AV++ + +GC+P +VTY + ++ C++G ++A + + +Q GF
Sbjct: 254 NAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLK 313
Query: 232 ------------------------------DKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
VV Y+ M+ + GRI DA+ + M
Sbjct: 314 GYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVM 373
Query: 262 KPKGCEPNVWIYNSLMDM---HG---RAKNLR 287
K KG P+ + YN+++ + HG RA LR
Sbjct: 374 KKKGFVPDTFCYNTVLKVLCDHGDLERAHTLR 405
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 102/230 (44%), Gaps = 4/230 (1%)
Query: 50 SRKLDLTPSSTHMYKILCDSLGKSGRAFE-ILKFFRDMKEKGILEDPSVYASLICSFASI 108
S +L P H +L L S A E + D + G+ S +A+L+ + +S
Sbjct: 94 SPRLRSRPLHAHAVSLL---LRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSA 150
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
A + F +E V+ ++ ++ G++ L + M A +
Sbjct: 151 GRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATY 210
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
V+++G K+ A+K++++++ +G +P Y ++++ C G +A ++ M+
Sbjct: 211 NVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKD 270
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KG V Y++ ++ K GR+ +A + + ++ G + Y+ L+D
Sbjct: 271 KGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLID 320
>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
Length = 578
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 116/227 (51%), Gaps = 2/227 (0%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H +L +SL K + K ++ M G++ + +Y LI + +V+ AE+L E
Sbjct: 156 HACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIYNVLIHACCKSGDVEKAEQLVCE 215
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
E K + DL + L+ +Y + + + L V + M+ A ++ ++ GF K
Sbjct: 216 MELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAGVSPDIVTYNSLIYGFCKEGK 275
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AVK++ ++ + P VTY ++I+ YCR+ + +A ++ M+ KG V Y+S
Sbjct: 276 MREAVKLFREI--KDVSPNHVTYTTLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNS 333
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
++ + GRIRDA +L+ +M + EP+ N+L++ + + +++
Sbjct: 334 VLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLINAYCKIGDMK 380
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 95/192 (49%), Gaps = 18/192 (9%)
Query: 136 LVLMYIEEGMVEKTLEVVESMK--NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+++Y+ M + ++V+E M+ + N+ C V++N +K R K Y+++I
Sbjct: 126 LMIIYVNCKMPQDAIQVLEYMRLHGFKPNLHACT--VLLNSLAKDRLTDTVWKSYKKMIR 183
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
G +P Y +I+A C+ G KAE++ EM+ K + Y++++++Y + +
Sbjct: 184 VGVVPNIHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYE 243
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNLRQLE-------KYTTVISAY 299
A+ + +M+ G P++ YNSL+ M K R+++ YTT+I Y
Sbjct: 244 ALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIKDVSPNHVTYTTLIDGY 303
Query: 300 NMAREFDMCVKF 311
+F+ ++
Sbjct: 304 CRVNDFEEALRL 315
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 131/327 (40%), Gaps = 45/327 (13%)
Query: 3 SQSKLHY-----YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP 57
S+ LHY ++M+ AG+ D Y ++ F K G + LF E + D++P
Sbjct: 236 SRKSLHYEALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIK----DVSP 291
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ Y L D + E L+ + M+ KG+ + Y S++ ++ A +L
Sbjct: 292 NHV-TYTTLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKL 350
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E E+ + D L+ Y + G ++ L+V M +A L + +++GF
Sbjct: 351 LNEMGERKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCW 410
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG-----------LYSK-------- 218
R +A ++ ++ G PG TY+ +++ YC +G +K
Sbjct: 411 VRDMESAKELLFCMLDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDEFLTKGYCVDLSV 470
Query: 219 ----------------AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
AEK++ M +G V Y+S+ Y K G+ ++++M
Sbjct: 471 CRALIRRLCHQERVGFAEKIYSTMHLRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMT 530
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+ N+ +Y +G ++ L
Sbjct: 531 KRSLLINLKLYRCFNASYGPHNSILHL 557
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 112/271 (41%), Gaps = 9/271 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILC 67
Y+KM G+V + Y ++ A K GD EK L E E + + DL + Y L
Sbjct: 178 YKKMIRVGVVPNIHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDL-----YTYNTLI 232
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ +E L M+ G+ D Y SLI F +++ A +LF+E K +
Sbjct: 233 SLYSRKSLHYEALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREI--KDVS 290
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ + L+ Y E+ L + + M+ L++ ++ + A K+
Sbjct: 291 PNHVTYTTLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKL 350
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
++ + P VT ++INAYC+IG A KV +M G Y +++ +
Sbjct: 351 LNEMGERKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCW 410
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ A L+ M G P Y+ L+D
Sbjct: 411 VRDMESAKELLFCMLDVGLSPGYCTYSWLVD 441
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 141/327 (43%), Gaps = 25/327 (7%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD---LTPSSTHMY 63
L + +M+ GI D Y ++ A + G ++ +F R ++ + P T Y
Sbjct: 237 LGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVF-----RTMNEGGILPDIT-TY 290
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L ++ GK R ++ + ++M+ G D + Y L+ + A +K A +F++ +
Sbjct: 291 SYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQG 350
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G + + + L+ +Y G + ++ MK + + +++N F + +
Sbjct: 351 AGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKE 410
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
V ++ ++ + P TY +I A + GL+ A+K+ + M +KG AY+ ++
Sbjct: 411 VVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIE 470
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH----------------GRAKNLR 287
YG+ +A+ M G +P V YNSL+ M G++ R
Sbjct: 471 AYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVAR 530
Query: 288 QLEKYTTVISAYNMAREFDMCVKFYNE 314
+ + VI A+ +F+ +K Y E
Sbjct: 531 NRDTFNGVIEAFRQGGQFEEAIKAYVE 557
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 122/287 (42%), Gaps = 38/287 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ AG V ++ Y ++ + + G + V LFLE K+ T + Y IL +
Sbjct: 345 FRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEM---KVSNTEPNAATYNILINV 401
Query: 70 LGKSGRAFEILKFFRDM-----------------------------------KEKGILED 94
G+ G E++ F DM EKG++
Sbjct: 402 FGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPS 461
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y +I ++ A + A F E G +E + L+ M+ + G+ +++ ++
Sbjct: 462 SKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILL 521
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M + + + ++ F + + A+K Y ++ C P + T ++++ YC G
Sbjct: 522 KMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAG 581
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
L ++E+ F E++ G V+ Y M+A+Y K R DA +L+ +M
Sbjct: 582 LVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEM 628
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 116/259 (44%), Gaps = 3/259 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+S G D Y ++EA + G ++ +F + + P++ Y IL +
Sbjct: 311 KEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQG--AGCVPNAA-TYSILLNLY 367
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G+ GR ++ F +MK + + Y LI F K LF + E+ + ++
Sbjct: 368 GRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNM 427
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
E + L+ + G+ E +++ M + S ++ + + Y A+ +
Sbjct: 428 ETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNT 487
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P TY S+I + + GLY ++E + ++M Q G + ++ ++ + + G+
Sbjct: 488 MNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQ 547
Query: 251 IRDAMRLVAKMKPKGCEPN 269
+A++ +M+ C+P+
Sbjct: 548 FEEAIKAYVEMEKARCDPD 566
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 139/296 (46%), Gaps = 10/296 (3%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
+ + + F + GD ++ LF + R++ P+ H+Y I+ LG+ G + + F
Sbjct: 113 FALVFKEFAQRGDWQRSLRLF-KYMQRQIWCKPNE-HIYTIMIGVLGREGLLEKCQEIFD 170
Query: 85 DMKEKGILEDPSVYA--SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
+M G+ PSV++ +LI ++ + K + EL +++ + + + ++
Sbjct: 171 EMPSHGVA--PSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCAR 228
Query: 143 EGM-VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
G+ E+ L + M++ + +++ ++R A V+ + G +P
Sbjct: 229 GGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDIT 288
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY+ ++ + ++ K ++ EM+ G + +Y+ ++ + ++G I++AM + +M
Sbjct: 289 TYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQM 348
Query: 262 KPKGCEPNVWIYNSLMDM---HGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNE 314
+ GC PN Y+ L+++ HGR ++R L V + A +++ + + E
Sbjct: 349 QGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGE 404
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 89/221 (40%), Gaps = 39/221 (17%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM +G+ + + ++EAF + G E+ ++E E + D P + +L
Sbjct: 522 KMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCD--PDEQTLEAVL----- 574
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
SVY FA + V+ +EE F E + G+L +
Sbjct: 575 ------------------------SVYC-----FAGL--VEESEEQFGEIKALGILPSVM 603
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ +Y + + ++++ M N NI I +I + + V+E+
Sbjct: 604 CYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEK 663
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
L S+GC G Y +++ A +G +A +V E ++G
Sbjct: 664 LKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGL 704
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 148/367 (40%), Gaps = 62/367 (16%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y E + S+ D Y +++ F K G+ EK + E RK P+ Y L
Sbjct: 171 YKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKC--VPNVV-TYSSLLH 227
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI---CS--------------------- 104
L K+G + L FR M KG + + Y +LI C+
Sbjct: 228 GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPP 287
Query: 105 -----------FASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ + ++ A++LFKE K L D + LV + +E+ ++
Sbjct: 288 DTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLL 347
Query: 154 ESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
E+MK A D ++ ++V G+S+ + + A + +++I++ P VTY+S+I+ C+
Sbjct: 348 ENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCK 407
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
G A +V M K + V ++S++ + G + +A +L+ M G EP +
Sbjct: 408 AGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVT 467
Query: 273 YNSLMDMHGRA-----------------------KNLRQLEKYTTVISAYNMAREFDMCV 309
Y +L++ R NL + ++ +I ARE D +
Sbjct: 468 YTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAM 527
Query: 310 KFYNEFR 316
E R
Sbjct: 528 AVVEELR 534
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 137/309 (44%), Gaps = 20/309 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ F K G+ ++ + E +R D Y + D L + G+ + R
Sbjct: 80 YSTVINGFCKQGEMDRACEILREMVTR--DGIAPDVVTYTSVVDGLCRDGKMDRACEMVR 137
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR-DLEVFLKLVLMYIEE 143
+MK KG+ D +++LI + + +V A +L+KE + D+ + L+ + +
Sbjct: 138 EMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKS 197
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G +EK ++++ M+ + + +++G K A+ ++ ++ S+GC+P VTY
Sbjct: 198 GNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTY 257
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
++I+ C A + EM V+Y++++ Y + GRI +A +L +M
Sbjct: 258 TTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMAT 317
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQ----LEK-------------YTTVISAYNMAREFD 306
K C P+ Y L+ A L + LE Y+ V++ Y+ A+ F
Sbjct: 318 KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFV 377
Query: 307 MCVKFYNEF 315
+F E
Sbjct: 378 EAAEFIQEM 386
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 19/164 (11%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ- 228
+I++GF K A+ +E++ + P + TY ++N C+ L SKA +V EM+
Sbjct: 12 IIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDG 70
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK-GCEPNVWIYNSLMD-------MH 280
K +V YS+++ + K G + A ++ +M + G P+V Y S++D M
Sbjct: 71 KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMD 130
Query: 281 GRAKNLRQLE---------KYTTVISAYNMAREFDMCVKFYNEF 315
+ +R+++ ++ +I+ + AR+ D +K Y E
Sbjct: 131 RACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEI 174
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 11/229 (4%)
Query: 11 EKMKSA-GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
E MK+A GI D Y ++ + + + A E +R ++ P++ Y L D
Sbjct: 348 ENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR--NVAPNAV-TYSSLIDG 404
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+GR ++ ++M K + + S+I + + ++ A +L G+
Sbjct: 405 LCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPG 464
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-------IVNGFSKRRAYW 182
+ + L+ + G +E E+ E M+ S + V ++ G K R
Sbjct: 465 MVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREID 524
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A+ V E+L S+ C P + +I++ R G +A K+ + + G
Sbjct: 525 KAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 3/259 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ A G E+ L + S K D + Y IL +L + G+ E + +
Sbjct: 297 YNILLRALLNQGKWEEGEKLMTKMFSEKCD---PNVVTYSILITTLCRDGKIEEAMNLLK 353
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
MKEKG+ D Y LI +F + VA E + G L D+ + ++ + G
Sbjct: 354 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 413
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ LE+ + + + + + A+ + +++S G P ++TY
Sbjct: 414 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYN 473
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+I+ CR G+ KA ++ ++M+ F VV Y+ ++ + K RI DA+ ++ M
Sbjct: 474 SMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGN 533
Query: 265 GCEPNVWIYNSLMDMHGRA 283
GC PN Y L++ G A
Sbjct: 534 GCRPNETTYTVLIEGIGFA 552
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 2/218 (0%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T M KI S +SG E L M KG D + LI F ++ V A + +
Sbjct: 86 TQMLKIFHRSC-RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVME 144
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E+ G D+ + L+ + + ++ V++ M++ + + +++ R
Sbjct: 145 ILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 203
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+KV +QL+S C P +TY +I A G +A K+ EM +G + Y+
Sbjct: 204 KLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYN 263
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+++ K G + A ++ ++ KGCEP+V YN L+
Sbjct: 264 TIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILL 301
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 112/271 (41%), Gaps = 4/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH E M G D ++++ F+ + + K + E Y L
Sbjct: 105 LHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEK----FGQPDVFAYNAL 160
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ K R + + M+ K D Y +I S S ++ +A ++ +
Sbjct: 161 INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNC 220
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + EG V++ L++++ M + L I+ G K A +
Sbjct: 221 QPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 280
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ L +GC P ++Y ++ A G + + EK+ +M + D VV YS ++
Sbjct: 281 MIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 340
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G+I +AM L+ MK KG P+ + Y+ L+
Sbjct: 341 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 371
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL ++ G E LK +M +G+ D Y ++I V A E+ + E
Sbjct: 227 YTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLE 286
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG D+ + L+ + +G E+ +++ M + + + + +++ +
Sbjct: 287 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 346
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + + + +G P +Y +I A+CR G A + M G +V Y++++
Sbjct: 347 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 406
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A K G+ A+ + K+ GC PN YN++
Sbjct: 407 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 440
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G+ D+ Y ++ AF + G + VA FLE + D Y + +L K
Sbjct: 355 MKEKGLTPDAYSYDPLIAAFCREGRLD-VAIEFLE--TMISDGCLPDIVNYNTVLATLCK 411
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G+A + L+ F + E G + S Y ++ + S + A + E G+ D
Sbjct: 412 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEIT 471
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ EGMV+K E++ M++ E + S +++ GF K A+ V + ++
Sbjct: 472 YNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMV 531
Query: 193 SQGCIPGQVTYASII 207
GC P + TY +I
Sbjct: 532 GNGCRPNETTYTVLI 546
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 4/174 (2%)
Query: 106 ASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD 165
A+ + + E ++ + RD ++ LK+ G ++L ++E+M N D
Sbjct: 62 ATTTDAAIPTERRQQHSQSLGFRDTQM-LKIFHRSCRSGNYIESLHLLETMVRKGYN-PD 119
Query: 166 CISCV-IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI 224
I C ++ GF R AV+V E L G P Y ++IN +C++ A +V
Sbjct: 120 VILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLD 178
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
M+ K F V Y+ M+ G++ A++++ ++ C+P V Y L++
Sbjct: 179 RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIE 232
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 121/256 (47%), Gaps = 7/256 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCDSLGKSGRAFEILKF 82
Y I++ KIG + L + E + K D+ Y + DSL K RA E + F
Sbjct: 179 YTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVV-----AYNTVIDSLCKDRRANEAMYF 233
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F +M ++GI + Y+S++ F ++ ++ A LFK+ + ++ + F LV +
Sbjct: 234 FSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK 293
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
EGM+ + V E M + +++G+ + A K+++ ++ +G P
Sbjct: 294 EGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRV 353
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y +IN +C+ ++A+ + EM + V YS+++ + + GR + A +L +M
Sbjct: 354 YNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMC 413
Query: 263 PKGCEPNVWIYNSLMD 278
G P+ Y+ L+D
Sbjct: 414 SYGLLPDSITYSILLD 429
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 127/271 (46%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++++ +M GI + Y I+ F +G + +LF + R ++ P+ T + IL
Sbjct: 231 MYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGR--NVMPN-TVTFTIL 287
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K G E + F M E G+ D Y++L+ + +++ A++LF KG
Sbjct: 288 VDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGF 347
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ V+ L+ + + + + ++ M + +L ++ GF + A K
Sbjct: 348 APSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQK 407
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++ S G +P +TY+ +++ C+ G +A ++ MQ+ + + Y+ ++
Sbjct: 408 LFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMC 467
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G++ A L + + KG +P+V Y ++
Sbjct: 468 NFGKLEAARELFSNLFVKGIQPSVVTYTVMI 498
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 124/270 (45%), Gaps = 3/270 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M G+ D+ Y +M+ + ++ LF + S +Y IL +
Sbjct: 304 FEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGF---APSVRVYNILING 360
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KS R E +M ++ + D Y++L+ F +VA++LFKE G+L D
Sbjct: 361 HCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPD 420
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G +++ ++++M+ +++ CI +++ G AA +++
Sbjct: 421 SITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFS 480
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L +G P VTY +I+ + GL ++A ++F +M G Y+ + + + G
Sbjct: 481 NLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNG 540
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+A+RL+ +M +G + + L+D+
Sbjct: 541 DPSNAVRLIEEMVGRGFSADSSTFQMLLDL 570
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++NG + AVK+++++ G P +TY +II C+IG + A ++ +M++K
Sbjct: 146 TLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEK 205
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
G VVAY++++ K R +AM ++M +G PNV Y+S+ +HG NL QL
Sbjct: 206 GCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSI--LHGFC-NLGQL 262
Query: 290 EKYTTV 295
+ T++
Sbjct: 263 NEATSL 268
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
S R A ++ G P VT+ +++N C A K+F E+ + GF +
Sbjct: 117 SNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSL 176
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ Y++++ K G +A++L+ KM+ KGC+P+V YN+++D
Sbjct: 177 ITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVID 219
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 129/266 (48%), Gaps = 3/266 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G+V + Y ++ +K G ++ ++ E + D + + Y + + L
Sbjct: 223 EMGKLGLVANERTYTVLINGLFKNGVKKQGFEMY---EKMQEDGVFPNLYTYNCVMNQLC 279
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K GR + + F +M+E+G+ + Y +LI ++ A ++ + + G+ +L
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + G + K L + +K+ L+ S ++V+GF ++ A K+ +++
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+G P +VTY +I+ + R KA ++ + M++ G V YS ++ + G++
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A RL M K CEPN IYN+++
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMI 485
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 4/223 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D G+ + L RD+K +G+ Y L+ F + A ++ KE E
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G+ + L+ + +EK +++ SM+ L V+++GF +
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++ ++ + C P +V Y ++I YC+ G +A K+ EM++K V +Y M+
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+ K + ++A RLV KM G +P+ S++ + RAKN
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPST----SILSLISRAKN 559
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 133/280 (47%), Gaps = 4/280 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++ + KS +VLD + +++ + G+ EK L +E + +P+ +Y L D
Sbjct: 151 FFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIEL--TEFGFSPNVV-IYTTLID 206
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K G + F +M + G++ + Y LI K E++++ +E G+
Sbjct: 207 GCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFP 266
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+L + ++ ++G + +V + M+ ++ + ++ G + A KV
Sbjct: 267 NLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV 326
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+Q+ S G P +TY ++I+ +C +G KA + +++ +G +V Y+ +V+ + +
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G A ++V +M+ +G +P+ Y L+D R+ N+ +
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 130/282 (46%), Gaps = 3/282 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YEKM+ G+ + Y +M K G ++ +F E R + + Y L
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT---YNTLIGG 312
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + + E K MK GI + Y +LI F + ++ A L ++ + +G+
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + LV + +G ++V+ M+ + S ++++ F++ A+++
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G +P TY+ +I+ +C G ++A ++F M +K + V Y++M+ Y K G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
A++L+ +M+ K PNV Y ++++ + + ++ E+
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 116/259 (44%), Gaps = 6/259 (2%)
Query: 38 SEKVAALFLECESRKLDLTPSST-----HMYKILCDSLGKSGRAFEILKFFRDMKEKGIL 92
S K+ + F S LT S T +Y+++ +S +S + +F +M + G +
Sbjct: 67 SGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFV 126
Query: 93 EDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
+ + L+ + F E + K +L D+ F L+ E G +EK+ ++
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVL-DVYSFGILIKGCCEAGEIEKSFDL 185
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ + + + I +++G K+ A ++ ++ G + + TY +IN +
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
G+ + +++ +MQ+ G + Y+ ++ K GR +DA ++ +M+ +G N+
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305
Query: 273 YNSLMDMHGRAKNLRQLEK 291
YN+L+ R L + K
Sbjct: 306 YNTLIGGLCREMKLNEANK 324
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 127/289 (43%), Gaps = 16/289 (5%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K+G FFRDM GI Y +I ++ A LF++ ++ G+ D
Sbjct: 107 LSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPD 166
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y + G++++++ + E MK ++N F K + A + +
Sbjct: 167 IVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFR 226
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + P ++Y+++I+A C+ G+ A K F++M + G YSS++ K G
Sbjct: 227 EMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAG 286
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD----------------MHGRAKNLRQLEKYT 293
+ +A L +M + + N+ Y +L+D G+A L+ YT
Sbjct: 287 NLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYT 346
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+I + R D ++ +NE R D + G +V S++EE
Sbjct: 347 ALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEE 395
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 138/343 (40%), Gaps = 38/343 (11%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + ++ M G++ + Y +++A K G+ + L E +DL + Y
Sbjct: 254 QMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVT---Y 310
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D L + G E + FR M + G+ + Y +LI + + A ELF E E
Sbjct: 311 TTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMRE 370
Query: 124 KGMLRDL-----------------------------------EVFLKLVLMYIEEGMVEK 148
K + D+ ++ L+ Y + G +
Sbjct: 371 KDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTE 430
Query: 149 TLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+ ++E M++ ++ C +++G KR A+ + ++ P Y ++I+
Sbjct: 431 AINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALID 490
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
C+ A+K+F EMQ K +AY++M+ K G ++A+ + KM G E
Sbjct: 491 GLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIEL 550
Query: 269 NVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
+++ Y SL+ + ++Q K+ + + + +C +
Sbjct: 551 DLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRL 593
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 40/311 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MK G D Y ++ +F K + F E + + DL P+ Y L D+
Sbjct: 190 FEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDK--DLKPNVIS-YSTLIDA 246
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLI---CSFASIAE---------------- 110
L K G +KFF DM G+L + Y+SLI C ++ E
Sbjct: 247 LCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLN 306
Query: 111 ----------------VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
+ AEELF+ + G+ +L+ + L+ +I+ ++K +E+
Sbjct: 307 IVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFN 366
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M+ ++ + IV G + ++ G V Y ++++AY + G
Sbjct: 367 EMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAG 426
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
++A + EM+ G + VV + +++ K G +++A+ +M +PNV +Y
Sbjct: 427 NRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYT 486
Query: 275 SLMDMHGRAKN 285
+L+D G KN
Sbjct: 487 ALID--GLCKN 495
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 125/276 (45%), Gaps = 3/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+MK G+ D Y +++ + KIG ++ LF E K Y L +S
Sbjct: 155 FEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLF---EEMKFMGCEPDVITYNALINS 211
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K +FFR+MK+K + + Y++LI + +++A + F + G+L +
Sbjct: 212 FCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPN 271
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + G + + + + M ++++ +++G + A +++
Sbjct: 272 EFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFR 331
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G P Y ++I+ + ++ KA ++F EM++K ++ + ++V
Sbjct: 332 AMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSES 391
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
++ + ++ +MK G N IY +LMD + +A N
Sbjct: 392 KLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGN 427
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 7/233 (3%)
Query: 3 SQSKLH----YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS 58
S+SKL +MK +GI + Y +M+A++K G+ + A+ L E R L T
Sbjct: 389 SESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGN--RTEAINLLEEMRDLG-TEV 445
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ + L D L K G E + +F M + + + +VY +LI + A++LF
Sbjct: 446 TVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLF 505
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E ++K M+ D + ++ ++ G ++ L + M + + +V G S+
Sbjct: 506 DEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQC 565
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A K ++I +G IP + ++ + +G +A ++ E+ +KG
Sbjct: 566 GQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 114/291 (39%), Gaps = 38/291 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ M AG+ + Y ++ K+ +K LF E R+ D+ P ++ +
Sbjct: 330 FRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELF--NEMREKDIKPDIL-LWGTIVWG 386
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + E +MKE GI +P +Y +L+ ++ A L +E + G
Sbjct: 387 LCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVT 446
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ F L+ + G+V++ + M + +L + + +++G K A K+++
Sbjct: 447 VVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFD 506
Query: 190 QLISQGCIPGQVTYASIINAYCRIG--------------------LYS------------ 217
++ + IP ++ Y ++I+ + G LY+
Sbjct: 507 EMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCG 566
Query: 218 ---KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+A K EM KG + ++ + + G I +A+ L ++ KG
Sbjct: 567 QVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKG 617
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 5/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L+ +++M++ GI + Y ++ G + L + +K++ + + L
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN---PNLVTFNAL 261
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D+ K G+ E K DM ++ I D Y SLI F + A+++F+ K
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAV 185
DL+ + L+ + + VE E+ M + L + D ++ ++ G A
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL-VGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
KV++Q++S G P +TY+ +++ C G KA +VF MQ+ + Y++M+
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 440
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G++ D L + KG +PNV YN+++
Sbjct: 441 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 3/254 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ K GD + L + E+ K++ + ++ + DSL K + L F+
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIE---ADVVIFNTIIDSLCKYRHVDDALNLFK 209
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M+ KGI + Y+SLI S A +L + EK + +L F L+ +++EG
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ ++ + M ++ ++NGF A +++E ++S+ C P TY
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++I +C+ ++F EM +G V Y++++ G +A ++ +M
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Query: 265 GCEPNVWIYNSLMD 278
G P++ Y+ L+D
Sbjct: 390 GVPPDIMTYSILLD 403
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 150/341 (43%), Gaps = 20/341 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
EKM+ GI + Y ++ F + S+ AL L + KL PS + +L +
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCR--RSQISLALALLGKMMKLGYEPSIVTLSSLL-NGY 90
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
R + + M E G D + +LI + A L ++G +L
Sbjct: 91 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 150
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V + G ++ ++ M+ A++ I I++ K R A+ ++++
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ ++G P VTY+S+I+ C G +S A ++ +M +K + +V +++++ + K G+
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQ-------------LEKYTT 294
+A +L M + +P+++ YNSL++ MH R +Q L+ Y T
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV-GVF 334
+I + ++ + + + E G V D ++ G+F
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 35/220 (15%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L KS R + + FR+M +G++ D Y +LI + A+++FK+
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ + L+ G +EK LEV + M+ +E+ +
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD------------------ 429
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+Y Y ++I C+ G +F + KG VV Y++M+
Sbjct: 430 ----IY-------------IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+ +++A L+ KMK G P+ YN+L+ H R
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
+++M S G+ D Y +++ G EK +F ++ KLD+ ++Y +
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI-----YIYTTMI 437
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ + K+G+ + F + KG+ + Y ++I S ++ A L K+ +E G L
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
D + L+ ++ +G + E++ M++
Sbjct: 498 PDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 115/228 (50%), Gaps = 1/228 (0%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E R TP Y ++ + + + GR + ++F +++ G + Y ++ +
Sbjct: 92 EMRDKGCTPDIV-TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTA 150
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ AEEL E +KG ++ F L+ +G+VE LEV+E + +
Sbjct: 151 ERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSY 210
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ F K++ A+ + ++S+GC P V+Y +++ A CR G A ++ +++
Sbjct: 211 NPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 270
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
KG +++Y++++ K G+ ++A+ L+ +M KG +P++ Y+++
Sbjct: 271 KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 318
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 116/278 (41%), Gaps = 16/278 (5%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ Y L L GR L +M + + D Y L+ + + K A +L
Sbjct: 30 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E +KG D+ + +V +EG V+ +E ++++ + + +++ G
Sbjct: 90 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 149
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ ++ +GC P VT+ +I+ CR GL A +V ++ + G ++
Sbjct: 150 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 209
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLE 290
Y+ ++ + K ++ AM + M +GC P++ YN+L+ R+ L QL+
Sbjct: 210 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 269
Query: 291 ---------KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y TVI A + ++ NE G
Sbjct: 270 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 307
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 106/252 (42%), Gaps = 16/252 (6%)
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
R + E + D Y +LI A + E + + D+ + L+ +
Sbjct: 21 RLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 80
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
++ +++++ M++ V+VNG + A++ + L S GC P V+Y
Sbjct: 81 SGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSY 140
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
++ C + AE++ EM QKG VV ++ +++ + G + A+ ++ ++
Sbjct: 141 NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 200
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDM 307
GC PN YN L+ + K + + + Y T+++A + E D+
Sbjct: 201 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 260
Query: 308 CVKFYNEFRMNG 319
V+ ++ + G
Sbjct: 261 AVELLHQLKDKG 272
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 90/223 (40%), Gaps = 3/223 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L E++ G +S Y ++ AF K +K A SR P Y
Sbjct: 189 EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC--YPDIVS-Y 245
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L +L +SG ++ +K+KG Y ++I + K A EL E
Sbjct: 246 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 305
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ D+ + + E +E + +++ + + + I+ G KRR +
Sbjct: 306 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 365
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
A+ ++ +I GC+P + TY +I GL +A + E+
Sbjct: 366 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 95/225 (42%), Gaps = 6/225 (2%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + +L L + G L+ + + G + Y L+ +F ++ A
Sbjct: 169 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 228
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN---AELNISDCISCVIVN 173
+G D+ + L+ G V+ +E++ +K+ A + IS +++
Sbjct: 229 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS---YNTVID 285
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G +K A+++ +++S+G P +TY++I CR A + F ++Q G
Sbjct: 286 GLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP 345
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y++++ K A+ L A M GC PN Y L++
Sbjct: 346 NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE 390
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 5/219 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL D L K R E + F + + G+ D Y I V+ A + K+ +
Sbjct: 186 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 245
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
EKG + D+ ++ +E V++ EV+ S A+ + IS ++ G + +
Sbjct: 246 EKGCVPDVVSHNAVINGLCKEKRVDEA-EVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRI---GLYSKAEKVFIEMQQKGFDKCVVAY 238
A+ +++++ +G P VTY +++ C+ G +A +F M +KG VV Y
Sbjct: 305 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 364
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
S+++ GK G++ DA RL+ M+ KGC PNV+ YNSL+
Sbjct: 365 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 403
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 4/229 (1%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
K L P + Y + D L K+GR + L +DM EKG + D + ++I V
Sbjct: 211 KHGLEPDAI-TYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRV 269
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
AE L E KG + F L+ G +K + + M + + ++
Sbjct: 270 DEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNIL 329
Query: 172 VNGFSKRRAYW---AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
V+G K R A+ +++ +I +G +P VTY+++I+ + G A ++ M+
Sbjct: 330 VDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEA 389
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
KG V Y+S+++ ++ +A+ L M KGC P+ Y +++
Sbjct: 390 KGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 135/323 (41%), Gaps = 38/323 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--------------------CE 49
YE+M AG D Y ++ F K+G+ ++ +F C+
Sbjct: 33 YERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCK 92
Query: 50 SRKLD-------------LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
+ KLD L P Y L + L K+GR E D KG +
Sbjct: 93 ADKLDEAQRILQRMVSENLVPDVV-TYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVI 148
Query: 97 VYASLICSFA-SIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
Y++LI + V A +LF ++G ++ + L+ ++E V + E+
Sbjct: 149 TYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSG 208
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
+ L V ++G K A+ + + + +GC+P V++ ++IN C+
Sbjct: 209 LVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKR 268
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+AE + M+ KG +++++++ + G+ + AM +M +G +P V YN
Sbjct: 269 VDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNI 328
Query: 276 LMDMHGRAKNLRQLEKYTTVISA 298
L+D +A+ ++++ T+ A
Sbjct: 329 LVDGLCKARQEGRIKEAITLFDA 351
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +YE++I G P VTY ++++ +C++G +A K+F ++GF VV Y++++
Sbjct: 29 AQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALIN 88
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
+ K ++ +A R++ +M + P+V YNSL++ +GR R L
Sbjct: 89 GFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARML 137
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 65/133 (48%)
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
G P ++TY ++++ C G S A+ ++ M + G+ VV Y++++ + K G + +
Sbjct: 4 HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDE 63
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYN 313
A+++ +G P+V YN+L++ +A L + ++ + + N+ + N
Sbjct: 64 ALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVN 123
Query: 314 EFRMNGGVIDRAM 326
NG V + M
Sbjct: 124 GLCKNGRVDEARM 136
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI---CSFASIAEVK 112
+P++ ++C ++G+ + + F++M ++G+ Y L+ C +K
Sbjct: 285 SPNAISFNTLICGQC-RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 343
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-- 170
A LF EKG + D+ + L+ + G ++ ++ +M+ CI V
Sbjct: 344 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME-----AKGCIPNVYT 398
Query: 171 ---IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
+++G A++++ ++ +GC+P +TY +II+A
Sbjct: 399 YNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 14/297 (4%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + +E M+S+ + D Y ++ K G+ EK L E R P
Sbjct: 112 NPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVT 171
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
++ + K G E L+ MK G D Y S+I + V A E+ K
Sbjct: 172 YNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM 231
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRA 180
DL F L+ + + GM+ + LEV+E M + + D I+ ++VNG +
Sbjct: 232 SCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI-LPDVITYTILVNGLCRVGQ 287
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A + E+++ QG IP + Y S+++ C+ G +A K+ EM + +V+ +
Sbjct: 288 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINM 347
Query: 241 MVAMYG---------KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ ++ K G I A+ L++ + +G P+V YN+L+D +A +R+
Sbjct: 348 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVRE 404
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 127/285 (44%), Gaps = 17/285 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L + MK AG D Y I+ A G + AA L+ S DL +
Sbjct: 187 EEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVE-AAEILKTMSCSPDLV-----TF 240
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D K+G L+ +M + IL D Y L+ + +V+VA L +E
Sbjct: 241 NTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR 300
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC----------VIVN 173
+G + D+ + LV + G +E+ ++V+ M E+ +++ +S +++
Sbjct: 301 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREI-LAEMVSINMVPPLFTYNIVLG 359
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G K + AV + L+++G +P VTY ++I+ C+ +A + EM G
Sbjct: 360 GLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFP 419
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V S+V + GR+ DA LV +M K PNV +Y SL+D
Sbjct: 420 NDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLID 464
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 112/234 (47%), Gaps = 7/234 (2%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y L D L KSG F K ++D+ G + + LI + A E +
Sbjct: 28 HSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRA 87
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E + D+ +F L+ ++G ++ +++ E+M+++ +N +++G K
Sbjct: 88 LDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGN 147
Query: 181 YWAAVKVYEQLISQG--CIPGQVTYASIINA-YCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A ++ E++I +G P VTY ++INA C+ G +A ++ M+ G V+
Sbjct: 148 LEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVIT 207
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-RQLE 290
Y+S++ GR+ +A ++ M C P++ +N+L+D +A L R LE
Sbjct: 208 YNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALE 258
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 130/291 (44%), Gaps = 19/291 (6%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+++ L L K G + +K F +M+ + D Y ++I ++ A EL
Sbjct: 95 PDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKAREL 154
Query: 118 FKEAEEKG--MLRDLEVFLKLVLMYI-EEGMVEKTLEVVESMKNAE-----LNISDCISC 169
+E +G D+ + L+ I ++G VE+ LE+++ MK A + + I
Sbjct: 155 LEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHA 214
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+ V G V+ E L + C P VT+ ++++ +C+ G+ +A +V EM ++
Sbjct: 215 LCVAG--------RVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 266
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
V+ Y+ +V + G+++ A L+ ++ +G P+V Y SL+D ++ + +
Sbjct: 267 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 326
Query: 290 EKYTTVISAYNMARE---FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
K +SA + E +M + + GG+I V + S L
Sbjct: 327 HKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDL 377
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 6/234 (2%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM- 62
Q + E++ G + D Y +++ K G+ E+ L E +R++ S +M
Sbjct: 289 QVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMV 348
Query: 63 -----YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
Y I+ L K G + + D+ +G + D Y +LI V+ A +L
Sbjct: 349 PPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDL 408
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E G + +V G V+ +V M + + +++G K
Sbjct: 409 ADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCK 468
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
A V + + QG Y +I + G ++A ++ EM +GF
Sbjct: 469 SDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGF 522
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 5/222 (2%)
Query: 57 PSST-HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
P+ T Y L +L + ++ M G D + SLI + +++VA
Sbjct: 125 PAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAH 184
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+LF + +G +D + L+ + E G +++ LE+ M ++ +V G
Sbjct: 185 DLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMY----THAALVKGL 240
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+ + +++ G P YA++++ +CR +AEK+ EM G CV
Sbjct: 241 CDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCV 300
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V + +V Y + GR+ A+R+ M+ KGCEPNVW YN+++
Sbjct: 301 VTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIV 342
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 96/216 (44%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + Y +L D+L K+G+ E F ++ +GI + + ++I + VA
Sbjct: 403 ADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTF 462
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
+ G D + + + ++ L ++ M ++ S +++N
Sbjct: 463 LENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFN 522
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
R Y A +++ Q++SQGC P VTY + + AYC G +AE V EM++ +A
Sbjct: 523 ERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMA 582
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
Y++++ + G+ A+ ++ M PN + +
Sbjct: 583 YNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTF 618
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 11/269 (4%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM G D+ Y ++E F + G ++ LF E +T + + L L
Sbjct: 189 KMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFRE-------MTQPDMYTHAALVKGLC 241
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+GR E L + MKE G YA+L+ + + + AE++ E + G++ +
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+V Y EG + + V ESM K E N+ IV GF + A+ + +
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNV--WTYNAIVQGFCNAGKVYKAMALLD 359
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+ G P VTY +I C G A ++ M+ G Y+ ++ KTG
Sbjct: 360 QMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTG 419
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +A L ++ +G PN +N++++
Sbjct: 420 KVDEACSLFDGLEYRGIRPNSVTFNTVIN 448
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 89/214 (41%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
I+ ++ + GR ++ F M+ KG + Y +++ F + +V A L + E
Sbjct: 305 IVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMREC 364
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ D+ + L+ +G + ++ M+ L V+++ K A
Sbjct: 365 GVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEA 424
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++ L +G P VT+ ++IN C+ G + A M G+ YS +
Sbjct: 425 CSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIEN 484
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KT ++ + + +M K +P+ Y +++
Sbjct: 485 LCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVIN 518
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 97/237 (40%), Gaps = 26/237 (10%)
Query: 63 YKILCD---SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI----------------- 102
Y L D S+G++ RA ILK G+ P+ + I
Sbjct: 583 YNTLIDGHTSIGQTDRAVTILKHM-----TGVASMPNHFTFFILLRHLLQRRLAEHVPLK 637
Query: 103 -CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL 161
S E+ ELF+ ++ + +L ++ + EE +++ +V MK L
Sbjct: 638 ATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENL 697
Query: 162 NISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEK 221
+++ I +VN F K R Y A + +I G +P + Y +++ G +A++
Sbjct: 698 PLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKE 757
Query: 222 VFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+F + K ++ + + ++ + + G +++ ++ C+P+ Y L +
Sbjct: 758 IFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTE 814
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 3/267 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ K G + LFLE R L P+ + L + +GRA ++ ++
Sbjct: 298 YSVLINGLCKEGQLDDANKLFLEMCDR--GLVPNDV-TFTTLINGHCVTGRADLGMEIYQ 354
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M KG+ D Y +LI + +++ A++L E ++G+ D + L+ +EG
Sbjct: 355 QMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEG 414
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+E LE+ + M + + + +++GF + A + +++ G P TY
Sbjct: 415 DLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYT 474
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+I+ +C+ G K+ EMQ G VV Y+ ++ K G++++A L+ M
Sbjct: 475 MVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNL 534
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQLEK 291
G P+ YN L++ H + N +K
Sbjct: 535 GVVPDDITYNILLEGHCKHGNREDFDK 561
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 3/215 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + L K G E K +M ++G+ D Y LI +++ A E+ KE
Sbjct: 368 YNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMV 427
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G+ D F L+ + EG V + + M A + D ++++GF K+
Sbjct: 428 KEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVK 487
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
K+ +++ G +PG VTY ++N C+ G A + M G + Y+ ++
Sbjct: 488 TGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ K G D +L ++ KG + Y SL+
Sbjct: 548 EGHCKHGNREDFDKLQSE---KGLVQDYGSYTSLI 579
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 124/302 (41%), Gaps = 16/302 (5%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + +L L K + E F ++ ++G+ + +LI + +
Sbjct: 222 PPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFR 281
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L + E + D+ + L+ +EG ++ ++ M + L +D ++NG
Sbjct: 282 LKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHC 341
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+++Y+Q++ +G P +TY ++IN C++G +A+K+ IEM Q+G
Sbjct: 342 VTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKF 401
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR-------AKNLRQL 289
Y+ ++ K G + A+ + +M +G E + + +L+ R + LR++
Sbjct: 402 TYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM 461
Query: 290 ---------EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
YT VI + + K E + +G V +++ K Q+
Sbjct: 462 LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521
Query: 341 EE 342
+
Sbjct: 522 KN 523
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/237 (18%), Positives = 95/237 (40%), Gaps = 16/237 (6%)
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E +G + VF L+ Y + G ++ ++ L I + + K
Sbjct: 147 EARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLT 206
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A YE+++ G P + +++ C+ ++A+ +F E+ ++G VV+++++
Sbjct: 207 SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTL 266
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK---------- 291
+ Y K+G + RL M P+V+ Y+ L++ + L K
Sbjct: 267 INGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGL 326
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+TT+I+ + + D+ ++ Y + G D ++ K+ + E
Sbjct: 327 VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLRE 383
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 137/331 (41%), Gaps = 20/331 (6%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ G D + ++ A K G A+ L E R+ L P T Y L + +
Sbjct: 280 MRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPD-TITYNTLISACSR 338
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ E K F DM+ D Y ++I + AE+LF + E +G D
Sbjct: 339 ASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVS 398
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + EG VEK E+ E M + +++ + K+ A+++Y +
Sbjct: 399 YNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQ 458
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G P VTY +I++ + ++A V EM G + YS+++ Y K G+
Sbjct: 459 SSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPV 518
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFY 312
+A M G P+ Y+ ++D+H R +N E + Y
Sbjct: 519 EAEETFDCMLRSGIRPDHLAYSVMLDIHLR----------------FN---EPKRAMTLY 559
Query: 313 NEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
E +G +D ++ +M+ K++++E++
Sbjct: 560 KEMLHDGITLDHSLYELMLRTLRKVNKVEDI 590
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 134/292 (45%), Gaps = 41/292 (14%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ H+Y+++ L + + ++ +M+E G D S++ S++ + +I + + +++
Sbjct: 917 TMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVY 976
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ +E G+ D + + L++MY + E+ ++ M+ A L +V F K+
Sbjct: 977 QRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQ 1036
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A +++E+L S+GC + Y +++ Y G +SKAE++F M+ G + +
Sbjct: 1037 QLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATM 1096
Query: 239 SSMVAMYGKTGRIRDAMRLVA-----------------------------------KMKP 263
++ YG +G+ ++A ++++ +MK
Sbjct: 1097 HLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKK 1156
Query: 264 KGCEPNVWIYNSLMDMHGRAKNL-RQLEKYTTVISAYNMAREFDMCVKFYNE 314
+G EP+ I+ + RA +L R+ + +++A A FD+ ++ E
Sbjct: 1157 EGLEPDHRIWTCFI----RAASLSRRTSEAIVLLNALQDA-GFDLPIRLLTE 1203
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 108/230 (46%), Gaps = 6/230 (2%)
Query: 56 TPSSTHMYKILCDSLGKSGR-AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+P++ + IL LGK+ + A + F R G VY +++ +A
Sbjct: 217 SPNARMLSTILS-VLGKANQEALAVEVFMRAEPSAG--NTVQVYNAMMGVYARRGRFNKV 273
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEG--MVEKTLEVVESMKNAELNISDCISCVIV 172
+EL E+G DL F L+ ++ G M +E++ ++ + L ++
Sbjct: 274 QELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLI 333
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+ S+ A KV++ + + C P TY ++I+ Y R GL KAE++F +++ +GF
Sbjct: 334 SACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFF 393
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
V+Y+S++ + + G + + +M G + YN+++ M+G+
Sbjct: 394 PDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGK 443
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 16/266 (6%)
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+++++ I D V+ +LI ++A+ + A +F G ++ L+ I +G
Sbjct: 803 NLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDG 862
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ VV+ +++ IS ++++ F++ + K+Y + + G P Y
Sbjct: 863 RLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYR 922
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+ R E + EM++ GF + ++S++ MY R +++ ++K
Sbjct: 923 VMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKED 982
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDMC 308
G EP+ YN+L+ M+ R + L+ Y ++++++ + +
Sbjct: 983 GLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQA 1042
Query: 309 VKFYNEFRMNGGVIDRAMAGIMVGVF 334
+ + E + G +DR+ M+ ++
Sbjct: 1043 EELFEELQSKGCKLDRSFYHTMMKIY 1068
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 92/226 (40%), Gaps = 3/226 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ Y+++K G+ D Y ++ + + D L E R L P YK L
Sbjct: 973 IQVYQRIKEDGLEPDEDTYNTLIVMYCR--DHRPEEGFSLMHEMRVAGLEPK-LDTYKSL 1029
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
S GK + + F +++ KG D S Y +++ + + AE LF ++ G+
Sbjct: 1030 VASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGV 1089
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ L++ Y G ++ +V+ ++K N+S +++ + + Y ++
Sbjct: 1090 EPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQ 1149
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
Q+ +G P + I A S+A + +Q GFD
Sbjct: 1150 KLIQMKKEGLEPDHRIWTCFIRAASLSRRTSEAIVLLNALQDAGFD 1195
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/192 (18%), Positives = 86/192 (44%), Gaps = 20/192 (10%)
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL-ISQGCIPGQVTYASIINAY 210
V + + + ++ ++ C +V + ++ A++VYE L + P ++I++
Sbjct: 172 VADVLDDRKVQMTPTDLCFVVKSVGQE-SWHRALEVYEWLNLRHWYSPNARMLSTILSVL 230
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ + A +VF+ + + V Y++M+ +Y + GR L+ M+ +GC+P++
Sbjct: 231 GKANQEALAVEVFMRAEPSAGN-TVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDL 289
Query: 271 WIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIM 330
+N+L++ +A + ++ ++ NE R +G D +
Sbjct: 290 VSFNTLINARLKAGAMMP-----------------NLAIELLNEVRRSGLRPDTITYNTL 332
Query: 331 VGVFSKLSQIEE 342
+ S+ S +EE
Sbjct: 333 ISACSRASNLEE 344
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 125/301 (41%), Gaps = 40/301 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M +GI D Y +++ + + ++ L+ E + L S +Y+++ +
Sbjct: 524 FDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHS---LYELMLRT 580
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSF--ASIAEVKVAEELFKEAEEKGML 127
L K + +I + RDM+E IC +I+ + V E + EA + ML
Sbjct: 581 LRKVNKVEDIGRVIRDMEE-------------ICGMNTQTISSILVKGECYDEAAK--ML 625
Query: 128 R---------DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
R D E L ++ Y G + L+++E +K S I+ +V K
Sbjct: 626 RRAISDHFEIDRENLLSILSSYSSSGRHAEALDLLEFLKEHSPRSSQMITEALVVMLCKA 685
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ AA+K Y G + S+I L ++A +VF +M+ G Y
Sbjct: 686 QQLDAALKEYSNNRELGFTGSFTMFESLIQCCLENELITEASQVFSDMRFCGIKASESLY 745
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKG-CEPNVWIYNSLMDMHGRAK----------NLR 287
SMV +Y K G A L+ + G N+ +Y ++++ +GR K NLR
Sbjct: 746 ESMVLLYCKMGFPETAHHLIDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLR 805
Query: 288 Q 288
Q
Sbjct: 806 Q 806
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 42/308 (13%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYK 64
LH+++ + + G LD Y ++ KIG++ + RK+D L + MY
Sbjct: 158 LHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQML-----RKIDGKLVKINVVMYN 212
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ DSL K + + + M K I D +++LI F + +++ A LF+E K
Sbjct: 213 TIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLK 272
Query: 125 GMLRDLEVFLKLV----------------LMYIEEGMVEKTLEVVESMK--------NAE 160
+ D F LV ++ ++EG++ + M N
Sbjct: 273 NINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKA 332
Query: 161 LNISDCIS-----------CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINA 209
++ + IS C ++NGF K + A+ ++ + +G P +VTY S+I+
Sbjct: 333 KHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDG 392
Query: 210 YCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
C+ G S A ++ EM G + Y+ ++ K + A+ LV K+K +G +P+
Sbjct: 393 LCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPD 452
Query: 270 VWIYNSLM 277
++ +N L+
Sbjct: 453 MYTFNILI 460
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 1/191 (0%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ H Y + + K E L F DM+ KGI D Y SLI + A EL
Sbjct: 346 PNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWEL 405
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E + G ++ + L+ + V++ + +V+ +K+ + +++ G K
Sbjct: 406 VDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCK 465
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A V++ L+S+G TY ++N C+ GL+ +AE + +M G V
Sbjct: 466 VGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVT 525
Query: 238 YSSMV-AMYGK 247
Y +++ A++ K
Sbjct: 526 YETLIQALFHK 536
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 128/335 (38%), Gaps = 63/335 (18%)
Query: 23 GCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKF 82
CYC + E + K+ + E T + L L +G+ E L F
Sbjct: 111 NCYCHMAEMNFAFSMMAKILKMGYE----------PDTITFNTLIKGLCLNGKVKEALHF 160
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL-VLMYI 141
+ G D Y +LI I E + A ++ ++ + K +K+ V+MY
Sbjct: 161 HDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGK--------LVKINVVMY- 211
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
I++ K + A ++Y Q+I++ P V
Sbjct: 212 ---------------------------NTIIDSLCKHKLVIDAYELYSQMIAKKISPDVV 244
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
T++++I +C +G +A +F EM K + ++ +V K G ++ A ++ M
Sbjct: 245 TFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVM 304
Query: 262 KPKGCEPNVWIYNSLMDMH------GRAKNL----------RQLEKYTTVISAYNMAREF 305
+G PNV Y+SLMD + +AK++ Y T+I+ + +
Sbjct: 305 MKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMV 364
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
D + +N+ + G D+ ++ K +I
Sbjct: 365 DEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRI 399
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 8/196 (4%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
+ + G + Y ++I F I V A LF + + KG+ D + L+ + G
Sbjct: 339 ISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGR 398
Query: 146 VEKTLEVVESMKN----AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ E+V+ M + A + +C+ ++ K A+ + +++ QG P
Sbjct: 399 ISYAWELVDEMHDNGQPANIFTYNCL----IDALCKNHHVDQAIALVKKIKDQGIQPDMY 454
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
T+ +I C++G A+ VF ++ KG+ Y+ MV K G +A L++KM
Sbjct: 455 TFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKM 514
Query: 262 KPKGCEPNVWIYNSLM 277
G P+ Y +L+
Sbjct: 515 DDNGIIPDAVTYETLI 530
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N + A + +++ G P +T+ ++I C G +A +
Sbjct: 108 ILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLAL 167
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
GF +Y +++ K G R A++++ K+ K + NV +YN+++D L
Sbjct: 168 GFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIID---------SL 218
Query: 290 EKYTTVISAYNM 301
K+ VI AY +
Sbjct: 219 CKHKLVIDAYEL 230
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 121/284 (42%), Gaps = 12/284 (4%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL---DLTPSSTHMYKILC 67
EK+ + G Y ++ K+G E+ L RK+ TP Y L
Sbjct: 291 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL-----RKIVDNGCTPDVV-TYTSLI 344
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D LGK R+FE K F++M +G+ D Y +LI ++ A ++K G +
Sbjct: 345 DGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 404
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ ++ + G + + + +SM+ L ++ + +++G K R A+++
Sbjct: 405 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 464
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
Q+ C P +TY +I+ C+ G A F EM + G V Y+ +++ + K
Sbjct: 465 LAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 524
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
G A + M C NV Y +L + G K RQL K
Sbjct: 525 AGNTDAACGVFDDMSSSRCSANVVTYGAL--ISGLCKR-RQLTK 565
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 130/303 (42%), Gaps = 19/303 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL---DLTPSSTHMYKILC 67
EK+ + G Y ++ K+G E+ L RK+ TP Y L
Sbjct: 10 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL-----RKIVDNGCTPDVV-TYTSLI 63
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D LGK R+FE K F++M +G+ D Y +LI ++ A ++K G +
Sbjct: 64 DGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 123
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ ++ + G + + + +SM+ L ++ + +++G K R A+++
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 183
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
Q+ C P +TY +I+ C+ G A F EM + G V Y+ +++ + K
Sbjct: 184 LAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 243
Query: 248 TGRIRDAMRLVAK-MKPKGCEPNVWIYNSLMDMHGRAKNLRQ----LEKYTT-----VIS 297
G A +A+ GC ++ Y +++D + K + + +EK T I+
Sbjct: 244 AGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIA 303
Query: 298 AYN 300
YN
Sbjct: 304 TYN 306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 10/286 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL--DLTPSSTHMYKILC 67
+++M G+ LD+ CY ++ + G + ++++ S D+ ST +
Sbjct: 79 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMI----- 133
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D L K+GR ++ F+ M+ +G+ + VY++LI ++ A E+ + ++
Sbjct: 134 DGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 193
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D + L+ + G VE + M A ++++GF K AA
Sbjct: 194 PDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHS 253
Query: 188 YEQLIS-QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
Q + GC TY +I++ + +A + ++ G + Y++++
Sbjct: 254 LAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLC 313
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
K GR+ +A+ L+ K+ GC P+V Y SL+D G+ K R E Y
Sbjct: 314 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK--RSFEAY 357
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 9/253 (3%)
Query: 19 VLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
++D+GC Y +++ K S + LF E R L L T Y L L +
Sbjct: 328 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLAL---DTVCYTALIRELLQ 384
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G+ + ++ M G + D +++I + + A +FK E +G+ + V
Sbjct: 385 TGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVV 444
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ + ++ LE++ MK A ++++G K AA +++++
Sbjct: 445 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 504
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
GC P TY +I+ +C+ G A VF +M VV Y ++++ K ++
Sbjct: 505 EAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLT 564
Query: 253 DAMRLVAKMKPKG 265
A MK +G
Sbjct: 565 KASLYFQHMKERG 577
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV + E++ + GC P TY +++N C++G +A + ++ G VV Y+S++
Sbjct: 5 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 64
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GK R +A +L +M +G + Y +L+
Sbjct: 65 GLGKEKRSFEAYKLFKEMALRGLALDTVCYTALI 98
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 19/288 (6%)
Query: 10 YEKMKSA-GIVLDSGCYCQIMEAFYKIGDSEKVAALF---LECESRKLDLTP-------- 57
YE+M + GI + Y ++E K GDS ++ F LE E R P
Sbjct: 404 YERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDF 463
Query: 58 -------SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
+ Y L L KSG + L M E G+ D + S++
Sbjct: 464 LMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQR 523
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
+ A +FK A E+G ++ + L+ + +++ L+++ M +
Sbjct: 524 ILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYST 583
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+V+G K AV V Q+ GC+P VTY ++I+ + + +A + EM + G
Sbjct: 584 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 643
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
F VV Y+++ ++GR +A+ ++ M +GC PN Y+S++D
Sbjct: 644 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD 691
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 129/298 (43%), Gaps = 19/298 (6%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L K + E L+ M E G + Y++++ + ++ A + ++
Sbjct: 546 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 605
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G L D + L+ + + + + + ++ M A + S + +G + +
Sbjct: 606 DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 665
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM-QQKGFDKCVVAYSSM 241
AV++ + + ++GC P +TY+SI++ C+ G ++A F +M + + V+AYS++
Sbjct: 666 EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSAL 725
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY----NSLMDMHGRAKNLRQL-------- 289
+ K GRI +A + +M G P+V + N L D GR +L
Sbjct: 726 IDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA-GRIDTGLELFCGMAERG 784
Query: 290 -----EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y +I+AY + EF E + +G + GI++ +I+E
Sbjct: 785 CKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDE 842
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 83/159 (52%)
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + LV + GMV L ++E M + L+ +++G K + A V++
Sbjct: 473 LVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFK 532
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + +GC P VTY+++I+ ++ +A ++ +M + G V YS++V K G
Sbjct: 533 RALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVG 592
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
R+ DA+ ++ +M+ GC P+ YN+L+D + + LR+
Sbjct: 593 RMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLRE 631
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 143/353 (40%), Gaps = 36/353 (10%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ AG + D+ Y +++ F+K + L E + PS Y LC L
Sbjct: 603 QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE--MLEAGFHPSVV-TYTTLCHGLC 659
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+SGR E ++ M +G + Y+S++ V A F++ M RD E
Sbjct: 660 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK-----MARD-E 713
Query: 132 VFLKLVLMY-------IEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWA 183
V V+ Y + G +++ E +E M A I D ++ +++NG
Sbjct: 714 VVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAG-RIPDVVTFSILINGLCDAGRIDT 772
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
++++ + +GC Y ++INAYC G +S A + EM+ G K V + ++
Sbjct: 773 GLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIK 832
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-DMHGRAKNLRQLE------------ 290
RI +A+ + P+ C + YN+L+ + ++ + LE
Sbjct: 833 ALCGNDRIDEAVSYFHSI-PEDCRDEIS-YNTLITSLVASRRSEQALELLRAMVADGGSP 890
Query: 291 ---KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
Y TV+ A ++ K E R G D IM+ SK Q+
Sbjct: 891 DACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQL 943
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 96/224 (42%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L + L K+GR + FR + G Y+++I EV +L +E
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G + + LV + +G ++ ++E M +I+ G K
Sbjct: 64 GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
AA +V ++++ +G +P + +++A C +G +A F ++ GF V Y++MV
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
K GR+ A ++ + P V+ + +D +A NL
Sbjct: 184 DGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNL 227
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 115/268 (42%), Gaps = 9/268 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M G ++ Y ++ A G +++ +L E + P + ++ L
Sbjct: 60 EEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLL---ERMAANGCPPELITFGLIIKGL 116
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G + +M ++G + D ++ L+ + + V A F++ G D
Sbjct: 117 CKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDA 176
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +V + G +E V++ + + + + + V+G SK A + ++
Sbjct: 177 VTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDS 236
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P VTY ++I+ C+ G K + ++ K + A+SS++ + R
Sbjct: 237 MPQTGVSPNTVTYDALIDGLCKAG---KLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHR 293
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +A++L+ M C PNV +NSLM+
Sbjct: 294 LEEAIQLLKAMP---CVPNVVCFNSLMN 318
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 142/360 (39%), Gaps = 56/360 (15%)
Query: 7 LHYYEKMKSAGIVLDSG-CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKI 65
L Y+EKM +V Y +++ K G ++ A FLE R + T + I
Sbjct: 703 LGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDE-AYEFLERMIRAGRIPDVVT--FSI 759
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + L +GR L+ F M E+G D Y ++I ++ E A L +E + G
Sbjct: 760 LINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHG 819
Query: 126 ML---------------------------------RDLEVFLKLVLMYIEEGMVEKTLEV 152
+ RD + L+ + E+ LE+
Sbjct: 820 IAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALEL 879
Query: 153 VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
+ +M + C +++G K + A K+ +++ S+G P TY +I+ +
Sbjct: 880 LRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSK 939
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
A F EM +K + YSS++ + K ++ DA +L ++ G EP + +
Sbjct: 940 AKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITM 996
Query: 273 YNSLMDM----HGRAKNLRQLEK------------YTTVISAYNMAREFDMCVKFYNEFR 316
Y++++D G K L + + +T++ +AY D VK N+ +
Sbjct: 997 YSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY +IN C+ G A F + Q GF VV YS+++ + + +L+ +
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 261 MKPKGCEPNVWIYNSLMDM---HGRAK 284
M +GC PN YN+L++ GRAK
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAK 88
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 123/257 (47%), Gaps = 5/257 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L K+GR E K F M ++G+ + + Y +L+ +A+ + L
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ + VF L+ Y ++G V++ + V M+ LN ++ K
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ +EQ+I + PG + Y S+I++ C + KA+++ +EM +G + ++S++
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+ K GR+ ++ +L M G +P++ Y++L+D + A + + K + + M
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 303 REFDMCVKFYNEFRMNG 319
+ CV YN +NG
Sbjct: 547 PD---CVT-YNTL-ING 558
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 5/277 (1%)
Query: 3 SQSKLHYYEKMKSAG--IVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
SQ L + M G D Y ++ F+K GD +K + E R + P+
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGI--LPNVV 235
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y + +L K+ + ++ M + G++ + Y S++ + S + K A K+
Sbjct: 236 -TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G+ D+ + L+ + G + ++ +SM L ++ G++ + A
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ + ++ G P ++ +I AY + G +A VF +M+Q+G + V Y +
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ + K+GR+ DAMR +M + P +YNSL+
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVI-----VNGFSKRRAYWAAVKVYEQLISQGC 196
+E ++ LE+++ M + + DC V+ +NGF K A Y +++ +G
Sbjct: 174 DENRSQEALELLQMMPD---DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGI 230
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
+P VTY+SII A C+ KA +V M + G Y+S+V Y +G+ ++A+
Sbjct: 231 LPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIG 290
Query: 257 LVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQL 289
+ KM G EP+V YNSLMD +GR R++
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 5/255 (1%)
Query: 31 AFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKG 90
A+ K G ++ +F + R+ L P T Y + L KSGR + +++F M ++
Sbjct: 383 AYAKQGKVDQAMLVF--SKMRQQGLNPD-TVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 91 ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
+ VY SLI S + A+EL E ++G+ D F ++ + +EG V ++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
++ + M + +++G+ A K+ ++S G P VTY ++IN Y
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
C+I A +F EM+ G ++ Y+ ++ +T R A L + G + +
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619
Query: 271 WIYNSLMDMHGRAKN 285
YN + +HG KN
Sbjct: 620 STYNII--LHGLCKN 632
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 4/274 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + Y+E+M + + Y ++ + +K L LE R + L T +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFF 482
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ DS K GR E K F M G+ D Y++LI + ++ A +L
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
GM D + L+ Y + +E L + M+++ ++ +I+ G + R A
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++Y + G TY I++ C+ L +A ++F + ++ M+
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K GR +A L A + G P+V Y SLM
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTY-SLM 695
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 137/331 (41%), Gaps = 19/331 (5%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+M GI LD+ + I+++ K G +SEK+ L + + +T Y L D
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT------YSTLID 522
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+G+ E K M G+ D Y +LI + I+ ++ A LF+E E G+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 129 DLEVFLKLV--LMYIEEGMVEKTLEV--VESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D+ + ++ L K L V ES EL+ + +I++G K A
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN----IILHGLCKNNLTDEA 638
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++++ L T+ +I A ++G +A+ +F + G V YS M
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAEN 698
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
+ G + + L M+ GC N + NS++ + ++ + Y +I + + E
Sbjct: 699 LIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLE 758
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
F + ++GG + I G+FS
Sbjct: 759 ASTASLFLD--LLSGGKYQEYHSCIRGGIFS 787
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 31/188 (16%)
Query: 178 RRAYWAAVKVYEQLISQGC---IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
R + AAV Y ++ G P TY +I + C G + +KGF
Sbjct: 66 RHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVD 125
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLV-AKMKPKGCEPNVWIYNSLM----DMHGRAKNLRQL 289
+A++ ++ R DAM +V +M GC PNV+ YN L+ D + + L L
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185
Query: 290 E--------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+ YTTVI+ + + D Y+E ++DR GI+ V +
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE------MLDR---GILPNVVT 236
Query: 336 KLSQIEEL 343
S I L
Sbjct: 237 YSSIIAAL 244
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 113/255 (44%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y + LG++ R I K M + G + Y LI + +K A +F E
Sbjct: 378 HTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNE 437
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G D + L+ ++ + G ++ + + + M+ A L+ VI+N K
Sbjct: 438 MQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGN 497
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AA ++ +++ GC+P VTY +I + Y A K++ +MQ GF V YS
Sbjct: 498 LAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSI 557
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
++ G G + +A + +M+ K P+ +Y L+D+ G+A N+ + ++ +
Sbjct: 558 VMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAG 617
Query: 301 MAREFDMCVKFYNEF 315
+ C + F
Sbjct: 618 LLPNVPTCNSLLSAF 632
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + L Y M++AG D Y +MEA G E+ ++F+E + + + P
Sbjct: 532 NYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQK--NWVPDEP- 588
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D GK+G + ++++ M G+L + SL+ +F + + A L +
Sbjct: 589 VYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSM 648
Query: 122 EEKGMLRDLEVFLKLV 137
G+ L+ + L+
Sbjct: 649 VALGLRPSLQTYTLLL 664
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 32/179 (17%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--------------------LECE 49
Y++M+ AG+ D+ Y I+ K G+ LF L+ +
Sbjct: 470 YKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAK 529
Query: 50 SRKLDLTPSSTH------------MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
+R ++ H Y I+ ++LG G E F +M++K + D V
Sbjct: 530 ARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPV 589
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
Y L+ + V+ A E ++ G+L ++ L+ ++ + +V+SM
Sbjct: 590 YGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSM 648
>gi|255661198|gb|ACU25768.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 426
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 147/303 (48%), Gaps = 19/303 (6%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R L+P + Y L GK G + L + + M++ + D +Y++LI + +
Sbjct: 1 RDRALSPDR-YTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCD 59
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-C 169
A +F + G++ DL V+ ++ ++ + + + ++ M+ A + + D +S
Sbjct: 60 YSKAISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGV-MPDTVSYT 118
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++ + + + + A+ V+ ++ C+ T +I+ Y ++G+ +A+K+F M++
Sbjct: 119 ALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKL 178
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------RA 283
G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G +A
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKA 238
Query: 284 KNL------RQLEK----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
NL R +E Y+T+IS + + D + + R +G ID+ + M+
Sbjct: 239 NNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVA 298
Query: 334 FSK 336
+ +
Sbjct: 299 YER 301
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 129/281 (45%), Gaps = 24/281 (8%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+ F +K GI+ D VY S+I F + A L E G++ D + L+ M
Sbjct: 64 ISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTM 123
Query: 140 YIEEGMVEKTLEVVESMKNAE--LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
Y+E + L V M+ + L+++ C ++++ + + A K++ + G
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTC--NIMIDVYGQLGMAKEADKLFWSMRKLGIE 181
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P V+Y +++ Y L+ +A +F MQ+K ++ VV Y+SM+ +YGKT A L
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----LEK------------YTTVISAYNM 301
+ +M+ +G EPN Y++++ + G+ L + EK Y T+I AY
Sbjct: 242 IQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYER 301
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
A + +E + I R A + + ++ +IEE
Sbjct: 302 AGLVSHAKRLLHELKTPDN-IPRDTA---IHILARAGRIEE 338
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 126/277 (45%), Gaps = 3/277 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +KM+ + D Y ++E K+ D K ++F ++ + P +Y +
Sbjct: 29 LSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAISIF--SRLKRSGIMPDLV-VYNSM 85
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ GK+ E +M+ G++ D Y +L+ + + A +F E E
Sbjct: 86 INVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVENKKFLEALSVFAEMREIKC 145
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
L DL ++ +Y + GM ++ ++ SM+ + + ++ + + A+
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIH 205
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ + + VTY S++ Y + + KA + EMQ +G + + YS++++++G
Sbjct: 206 LFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWG 265
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
K G++ A L K++ G E + +Y +++ + RA
Sbjct: 266 KVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYERA 302
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 148/328 (45%), Gaps = 27/328 (8%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK--LDLTPSSTHMYKILCDS 69
+M++AG++ D+ Y ++ + + + ++F E K LDLT + I+ D
Sbjct: 104 EMRTAGVMPDTVSYTALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCN-----IMIDV 158
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ G A E K F M++ GI + Y +L+ + A LF+ + K + ++
Sbjct: 159 YGQLGMAKEADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQN 218
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++++Y + EK +++ M++ + + I++ + K A ++E
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFE 278
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L S G QV Y ++I AY R GL S A+++ E++ + + + + + G
Sbjct: 279 KLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELKTPD----NIPRDTAIHILARAG 334
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK----------NLRQLEKYTT----- 294
RI +A + + G ++ ++ ++D+ + K +R LE ++
Sbjct: 335 RIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYSNIVEVFDKMRGLEYFSDSYVIA 394
Query: 295 -VISAYNMAREFDMCVKFYNEFRMNGGV 321
V++AY EF+ Y E + G V
Sbjct: 395 LVLNAYGKLHEFEKANDVYTEMQDEGCV 422
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P + TY+++I + + GL+ A +M+Q +V YS+++ + K A+ +
Sbjct: 7 PDRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAISI 66
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE----------------KYTTVISAYNM 301
+++K G P++ +YNS++++ G+AK R+ YT +++ Y
Sbjct: 67 FSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVE 126
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++F + + E R ++D IM+ V+ +L +E
Sbjct: 127 NKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKE 167
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 123/249 (49%), Gaps = 11/249 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+++KMK+ G+ Y +++ + K EK L E + + P++ Y L +
Sbjct: 396 WFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA---YCSLIN 452
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+LGK+ R + F+++KE VYA +I F ++ A +LF E + +G
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP 512
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMK----NAELNISDCISCVIVNGFSKRRAYWAA 184
D+ + L+ ++ GMV + ++ M+ A++N + +I+NGF++ A
Sbjct: 513 DVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHN----IILNGFARTGVPRRA 568
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++++E + G P VTY +++ + G++ +A ++ EM+ KGF+ + YSS++
Sbjct: 569 IEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDA 628
Query: 245 YGKTGRIRD 253
G +D
Sbjct: 629 VGNMDHEKD 637
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 130/279 (46%), Gaps = 10/279 (3%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
+ S + +++MK + Y ++ ++K+G EK LF E ++ +P+ +
Sbjct: 249 NDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM--KRAGCSPT-VYT 305
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L LGK+GR E +++M G+ D +L+ + + EEL
Sbjct: 306 YTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRL---EELTNVFN 362
Query: 123 EKGMLRDLEVFLK----LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
E G R + + ++ + V + + MK ++ S+ ++++G+ K
Sbjct: 363 EMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKT 422
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A+ + E++ +G P Y S+INA + Y A ++F E+++ + Y
Sbjct: 423 NRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVY 482
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ M+ +GK G++ +A+ L +MK +G P+V+ YN+LM
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 148/321 (46%), Gaps = 21/321 (6%)
Query: 40 KVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKG-ILEDPSVY 98
K ++F + + RK T SST+ IL L + G+ ++ + + +M +G D Y
Sbjct: 180 KALSVFYQAKGRKCKPT-SSTYNSVILM--LMQEGQHEKVHEVYTEMCNEGDCFPDTITY 236
Query: 99 ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
++LI S+ + A LF E ++ M +++ L+ +Y + G VEK L++ E MK
Sbjct: 237 SALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR 296
Query: 159 AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK 218
A + + ++ G K A +Y+ +++ G P V +++N ++G +
Sbjct: 297 AGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEE 356
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
VF EM VV+Y++++ A++ + + KMK G P+ + Y+ L+
Sbjct: 357 LTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILI 416
Query: 278 DMHGRA----KNLRQLEK------------YTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
D + + K L LE+ Y ++I+A A+ ++ + + E + N G
Sbjct: 417 DGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGN 476
Query: 322 IDRAMAGIMVGVFSKLSQIEE 342
+ + +M+ F K ++ E
Sbjct: 477 VSSRVYAVMIKHFGKCGKLSE 497
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
K D S Y IL D K+ R + L +M EKG P+ Y SLI +
Sbjct: 401 KADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+ A ELFKE +E V+ ++ + + G + + +++ MKN +
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++G K A + ++ GC ++ I+N + R G+ +A ++F M+ G
Sbjct: 521 MSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGI 580
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
V Y++++ + G +A RL+ +MK KG E + Y+S++D G
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAVG 630
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 1/196 (0%)
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
P V + L+ + V A +F +A+ + + ++LM ++EG EK EV
Sbjct: 162 PVVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYT 221
Query: 155 SMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M N D I+ +++ + K +A+++++++ P + Y +++ Y ++
Sbjct: 222 EMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKV 281
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G KA +F EM++ G V Y+ ++ GK GR+ +A L M G P+V
Sbjct: 282 GKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFL 341
Query: 274 NSLMDMHGRAKNLRQL 289
N+LM++ G+ L +L
Sbjct: 342 NNLMNILGKVGRLEEL 357
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 119/268 (44%), Gaps = 2/268 (0%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y+ M + G+ D +M K+G E++ +F E + + TP+ ++
Sbjct: 326 YKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRC--TPTVVSYNTVIKAL 383
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
E+ +F MK G+ Y+ LI + V+ A L +E +EKG
Sbjct: 384 FESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPC 443
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + E E+ + +K N+S + V++ F K AV ++
Sbjct: 444 PAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFN 503
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +QG P Y ++++ + G+ ++A + +M++ G + +++ ++ + +TG
Sbjct: 504 EMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTG 563
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R A+ + MK G +P+ YN+L+
Sbjct: 564 VPRRAIEMFETMKHCGIKPDGVTYNTLL 591
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 110 EVKVAEELFKEA-EEKGMLRDLEVFLKLVLMYIEEGMV--EKTLEVVESMKNAELNISDC 166
E+ V + FK A + + D ++ L+ +EE + E + E ++N +++
Sbjct: 105 EINVKIQFFKWAGKRRNFQHDCSTYMALIRC-LEEARLYGEMYRTIQEVVRNTYVSVGPV 163
Query: 167 ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
+ +V + + A+ V+ Q + C P TY S+I + G + K +V+ EM
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 227 QQKGFDKC---VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+G C + YS++++ Y K GR A+RL +MK +P IY +L+ ++ +
Sbjct: 224 CNEG--DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKV 281
Query: 284 ----KNLRQLEK------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
K L E+ YT +I A + Y +G D
Sbjct: 282 GKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFL 341
Query: 328 GIMVGVFSKLSQIEEL 343
++ + K+ ++EEL
Sbjct: 342 NNLMNILGKVGRLEEL 357
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 6/223 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL D L K GR E + ++M KG + Y +LI ++ + A EL +
Sbjct: 369 YSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLV 428
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G + D+ + +V +EG ++K L++VE M S ++ G +
Sbjct: 429 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVD 488
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++++S+ C + Y S++N YC+ +A+KV ++ + + Y++++
Sbjct: 489 EAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALM 545
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGR 282
Y K GR+ + + M +GC PN+ YN +MD HG+
Sbjct: 546 DGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGK 588
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 129/300 (43%), Gaps = 9/300 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + ++M + D Y +++ K ++K + + E R + TP + I+
Sbjct: 246 LEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGV--TPDTVTFNSIM 303
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K+G+ M E+ Y +LI V A++L E G
Sbjct: 304 -DGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ + L + G +++ E+V+ M + +++G K A +
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYE 422
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ E L+S G +P VTY I++ C+ G KA K+ M ++G V+ Y++++
Sbjct: 423 LLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLC 482
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY------TTVISAYN 300
+TGR+ +A + +M K C + Y SL++ + ++ ++ +K T I YN
Sbjct: 483 RTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYN 542
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 22/275 (8%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E + S+G V D Y I++ K G +K AL + K TPS Y L + L
Sbjct: 425 ESLVSSGFVPDVVTYTIIVDGLCKEGRLDK--ALKMVEGMLKRGCTPSVI-TYTALMEGL 481
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++GR E F++M K D Y SL+ + + K A+++ +
Sbjct: 482 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI--- 538
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV--------IVNGFSKRRAYW 182
+V+ L+ Y +EG +++ V E M C CV +++G K
Sbjct: 539 DVYNALMDGYCKEGRLDEIPNVFEDMA--------CRGCVPNIKTYNIVMDGLCKHGKVD 590
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A E + S GC+P V+Y II+ + +A +V +M Q G V Y++++
Sbjct: 591 EAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM 650
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
A + K R DA+ ++ M G +P+ YN+L+
Sbjct: 651 AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 685
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 46/287 (16%)
Query: 29 MEAFYKIGDSEKVAALFLECESRKLDL--TPSSTHMYKILCDSLGKSGRAFEILKFFRDM 86
++ + G S+++ A+F R LD P S + Y ++ SL + + +
Sbjct: 132 LQTLLENGSSDRIPAMF----ERMLDAGYAPDS-YTYHLVIKSLCQMNQIDKAFTMLDKA 186
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
K +G + SVY L +F +K A E+F+ D + ++ + +
Sbjct: 187 KVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSP----DAIAYNAIIHGHCRKNDC 242
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
+ LE ++ M ++ ++++G K A ++ +++ +G P VT+ SI
Sbjct: 243 DGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSI 302
Query: 207 INAYCRIGLYSKAEKVFIEMQQK-----------------------------------GF 231
++ C+ G + +A + M ++ GF
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
VV YS + K GRI +A LV +M KGC PN+ YN+L+D
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLID 409
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 130/335 (38%), Gaps = 69/335 (20%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M AG DS Y ++++ ++ +K + + + R +Y IL +
Sbjct: 148 FERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFK---PEVSVYTILTRA 204
Query: 70 LGKSGR---AFEI----------------------------LKFFRDMKEKGILEDPSVY 98
K+GR A EI L+F ++M E+ + D Y
Sbjct: 205 FCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTY 264
Query: 99 ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
LI ++ A E+ E ++G+ D F ++ + G E+ ++ M
Sbjct: 265 NILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 324
Query: 159 AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK 218
S C +++G K++ A + ++ +S G +P VTY+ + + C+ G +
Sbjct: 325 RNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDE 384
Query: 219 AEKVFIEMQQK-----------------------------------GFDKCVVAYSSMVA 243
A ++ EM K GF VV Y+ +V
Sbjct: 385 AFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVD 444
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K GR+ A+++V M +GC P+V Y +LM+
Sbjct: 445 GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALME 479
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 131/320 (40%), Gaps = 27/320 (8%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +M+ + K G +++ +F + R P+ Y I+ D L K G+ E F
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGC--VPN-IKTYNIVMDGLCKHGKVDEAFPFLE 597
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M G + D Y +I ++ K A ++ + + G+ D + L+ + +E
Sbjct: 598 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 657
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ-VTY 203
+ + ++++M A ++ + +++G S+ A ++ +++ GC+ TY
Sbjct: 658 RFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTY 717
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+II+ C+ G +A + M G + V Y+ + K GR+ +A L+++M
Sbjct: 718 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM-- 775
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEF-RMNGGVI 322
LR YTTVI A + D K E + G I
Sbjct: 776 --------------------DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCI 815
Query: 323 DRAMAGIMVGVFSKLSQIEE 342
+++ F+K +++E
Sbjct: 816 TSHTFNLLIDAFTKTKRLDE 835
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 14/271 (5%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ E M SAG V D Y I++ +K ++ + + + P Y L
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI---PPDAVTYNTLMA 651
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG-ML 127
K R + + ++M + G+ D Y +LI + + A EL E G ++
Sbjct: 652 QFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVV 711
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ ++ +EG +++ L +++ M + + V N F R +
Sbjct: 712 SACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANT----VTYNIFIDRLCKEGRLDE 767
Query: 188 YEQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ-KGFDKCVVAYS--SMVA 243
L+S+ + +V+Y ++I C+ +A K+ EM KG C+ +++ ++
Sbjct: 768 ASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL--CITSHTFNLLID 825
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ KT R+ +A+ L+ M +GC P+V YN
Sbjct: 826 AFTKTKRLDEALTLLGLMVQRGCSPSVITYN 856
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 92/211 (43%), Gaps = 4/211 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S+ Y + D L K G + L M G+ + Y I + A L
Sbjct: 712 SACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL 771
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE-LNISDCISCVIVNGFS 176
E + LRD + +++ + +++ ++ M + L I+ ++++ F+
Sbjct: 772 LSEMD---TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFT 828
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K + A+ + ++ +GC P +TY +I C++ KA ++F EM +G V
Sbjct: 829 KTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSV 888
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
+Y+ ++ GR ++A++++ +M CE
Sbjct: 889 SYTVLIYGLCGQGRGKEALQVLEEMASSDCE 919
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/300 (18%), Positives = 106/300 (35%), Gaps = 55/300 (18%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
ST +L ++G + I F M + G D Y +I S + ++ A +
Sbjct: 124 STFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTML 183
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+A+ +G ++ V+ L + + G ++ LE+ ++ +
Sbjct: 184 DKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS-------------------- 223
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
P + Y +II+ +CR A + EM ++ V Y
Sbjct: 224 -------------------PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTY 264
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------- 291
+ ++ K + A ++ +M +G P+ +NS+MD +A +
Sbjct: 265 NILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 324
Query: 292 ---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y T+IS + D +EF +G V D I+ K +I+E
Sbjct: 325 RNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDE 384
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL----GKSGRAFEILKFFRDMKEK 89
++ D +K F C + P H K C+ L + +A E F++ +
Sbjct: 108 QLDDLDKAVKFFDWCTGQ-----PGYKHS-KFTCNCLLSAFVRKKKAQEAYDLFKNHRCG 161
Query: 90 GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKT 149
D Y++LI F + + A L E E++G++ V+ ++ + G V+
Sbjct: 162 LCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSA 221
Query: 150 LEVVESMKNAELNISDCISCVI-----VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
L M+ +C VI V+ K A + E +I GC P VTY
Sbjct: 222 LVHYRDMQR------NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYN 275
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
++IN +C++G +A +F +M + V Y+ ++ Y K R +D +L+ +M
Sbjct: 276 TLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKY 335
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
GCEPN YN+LMD L K I A+N+A+
Sbjct: 336 GCEPNFITYNTLMD---------SLVKSGKYIDAFNLAQ 365
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 11/258 (4%)
Query: 25 YCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILK 81
Y +M++ K G D+ +A + L + D PS + ++ D K G+ +
Sbjct: 344 YNTLMDSLVKSGKYIDAFNLAQMML-----RRDCKPSH-FTFNLMIDMFCKVGQLDLAYE 397
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
F+ M ++G L D Y +I + A +L + E G D+ + +V
Sbjct: 398 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ V++ EV E ++N + D ++C +++G K R A K+ ++ G P
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFL-DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 516
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
V Y +I+ +C+ K+ F EM KG V+ YS ++ K+ R+RD L+
Sbjct: 517 VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT 576
Query: 261 MKPKGCEPNVWIYNSLMD 278
M +G P+ +Y S++D
Sbjct: 577 MLERGVTPDAIVYTSVID 594
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 7/269 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILCD 68
E+M AG D Y I+ K ++ ++ L LD+ ST L D
Sbjct: 435 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCST-----LID 489
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L KS R + K R+M+ G D Y LI F ++ + F E +KG +
Sbjct: 490 GLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVP 549
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + ++ + V ++++M + + +++G K +Y A ++Y
Sbjct: 550 TVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELY 609
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ + GC P VTY +++ C++ +A + M+ G V Y+S+ + K+
Sbjct: 610 KLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKS 669
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
A RL MK +GC P ++Y+ L+
Sbjct: 670 AEHDKAFRLFQAMKSRGCSPTPFMYSLLL 698
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 97/222 (43%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y + L K+ + E + + ++ G D ++LI + AE+
Sbjct: 443 PPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEK 502
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L +E E G D+ + L+ + + ++K+L M + + ++++
Sbjct: 503 LLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLC 562
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K + + ++ +G P + Y S+I+ C+ Y +A +++ M+Q G VV
Sbjct: 563 KSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVV 622
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y+ +V K R+ +A+ L+ M+ GC P+ YNS+ D
Sbjct: 623 TYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFD 664
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 133/335 (39%), Gaps = 21/335 (6%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
C C ++ AF + +++ LF ++ + L + Y L + K+ + +
Sbjct: 135 CNC-LLSAFVRKKKAQEAYDLF---KNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLL 190
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+M+++GI+ +VY ++I V A +++ + + + + LV +
Sbjct: 191 DEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALCKS 249
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
+ ++E M A + ++NGF K AV ++ Q++ C P TY
Sbjct: 250 ARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTY 309
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+I+ YC+ K+ EM + G + + Y++++ K+G+ DA L M
Sbjct: 310 NILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLR 369
Query: 264 KGCEPNVWIYNSLMDMHGRAKN----------------LRQLEKYTTVISAYNMAREFDM 307
+ C+P+ + +N ++DM + L + Y +IS A D
Sbjct: 370 RDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDD 429
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ G D +V K SQ++E
Sbjct: 430 ARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDE 464
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 154/390 (39%), Gaps = 55/390 (14%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q ++M+ GIV + Y I++ + D+ +V + + + + PS Y
Sbjct: 184 QQAYRLLDEMEKRGIVPHNAVYNTIIKG---LCDNGRVDSALVHYRDMQRNCAPSVI-TY 239
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL D+L KS R + DM E G + Y +LI F + + A LF + E
Sbjct: 240 TILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLE 299
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNI------------------ 163
D+ + L+ Y ++ + ++++ M E N
Sbjct: 300 NSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYID 359
Query: 164 ----------SDCISC-----VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
DC ++++ F K A ++++ + +GC+P TY +I+
Sbjct: 360 AFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMIS 419
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
CR A ++ M + G VV Y+S+V+ K ++ +A + ++ G
Sbjct: 420 GACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFL 479
Query: 269 NVWIYNSLMD-------MHGRAKNLRQLEK---------YTTVISAYNMAREFDMCVKFY 312
+V ++L+D + K LR++E+ YT +I + A + D + F+
Sbjct: 480 DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFF 539
Query: 313 NEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+E G V I++ K +++ +
Sbjct: 540 SEMLDKGCVPTVITYSIVIDKLCKSARVRD 569
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 13/253 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYK---IGDSEKVAALFLECESRKLDLTPSSTHM--YK 64
YE +++ G LD +++ K + D+EK+ R+++ S+ + Y
Sbjct: 469 YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLL--------REMERNGSAPDVVAYT 520
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
IL K+ + + L FF +M +KG + Y+ +I A V+ L K E+
Sbjct: 521 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 580
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ D V+ ++ + ++ E+ + MK + V+V+ K A
Sbjct: 581 GVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEA 640
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ + E + S GC+P VTY S+ + + + + KA ++F M+ +G YS ++
Sbjct: 641 IHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTK 700
Query: 245 YGKTGRIRDAMRL 257
++ AM +
Sbjct: 701 LVAEEKMDQAMEI 713
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 129/278 (46%), Gaps = 3/278 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y+ +M G+ D + ++ A + G E +F E + + Y
Sbjct: 300 LGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLG---SGRDIYTYNTF 356
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D++ K G L+ DM+ + Y++L+ F+ + + A +L ++ + +
Sbjct: 357 VDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRI 416
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + L+ +Y++ G ++ V E M+ + ++NG+ K+
Sbjct: 417 QLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAF 476
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ + + +QG P +TY+++I+ Y + G++ A V+++ ++ G VV +SS +
Sbjct: 477 LVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLA 536
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
K G + A+ L+ +M G +PNV YN+++D G++K
Sbjct: 537 KNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSK 574
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 121/282 (42%), Gaps = 48/282 (17%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L EKMKS I LD CY ++ + K G +++A + E E ++ T Y L
Sbjct: 405 LKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIE---KDTVTYNSL 461
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ GK GR + +DM+ +G+ Y++LI ++ A ++ + +E G+
Sbjct: 462 INGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGL 521
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ +F + + G+VE A+
Sbjct: 522 KADVVLFSSFIDTLAKNGLVE-----------------------------------CALS 546
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG-FDKCVVAYSSMVAMY 245
+ ++++ G P VTY +II+A+ + ++++ + +M G + VV ++ V
Sbjct: 547 LLDEMMKMGIKPNVVTYNTIIDAFGKSKIFTEEDSDIGDMGIVGVYGGQVVRVTNPVIRG 606
Query: 246 GKTG---RIRDA------MRLVAKMKPKGCEPNVWIYNSLMD 278
G++ R+R + + L KM +G PNV ++++++
Sbjct: 607 GRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILN 648
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 107/270 (39%), Gaps = 20/270 (7%)
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
RAFE+ + G ++ + + I + + +A F +
Sbjct: 189 RAFEVFYAALPLVGGGAVDKGKLLTAAIGALGKMGRPDLARRAFDTGIAGSYGNTVFAHS 248
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA-AVKVYEQLIS 193
L+ Y G+ + + V+ESMK A L + +++ K + + Q++
Sbjct: 249 ALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLQ 308
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
G P + T+ S++ A R G A VF EM G + + Y++ V K G +
Sbjct: 309 DGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMGL 368
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYN 313
A+++V M+ +PNV Y++LMD ++ ++D +K
Sbjct: 369 ALQVVLDMEANNAKPNVVTYSTLMD-------------------GFSKLEKYDEALKLRE 409
Query: 314 EFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
+ + +DR ++ ++ K + +E+
Sbjct: 410 KMKSLRIQLDRVCYNTLLAIYVKTGKYDEI 439
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 117/284 (41%), Gaps = 57/284 (20%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEI-LKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
L P++ Y + D+ GK G L +FR M + G+ D + SL+ + + ++
Sbjct: 275 LRPTTVS-YNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLED 333
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK--NAELNISDCISCVI 171
A +F E G RD+ + V + G + L+VV M+ NA+ N+
Sbjct: 334 ARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNV-------- 385
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
VTY+++++ + ++ Y +A K+ +M+
Sbjct: 386 -----------------------------VTYSTLMDGFSKLEKYDEALKLREKMKSLRI 416
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE- 290
V Y++++A+Y KTG+ + + +M+ G E + YNSL++ +G+ L +
Sbjct: 417 QLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAF 476
Query: 291 ---------------KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y+T+I Y+ A Y +F+ +G
Sbjct: 477 LVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESG 520
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 169 CVIVNGFSKRRAYWAAVKVYE------QLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
C I+ G R +A++ +E L+ G + + I A ++G A +
Sbjct: 174 CQILRGLGDRDK--SALRAFEVFYAALPLVGGGAVDKGKLLTAAIGALGKMGRPDLARRA 231
Query: 223 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
F + V A+S++++ Y ++G +AM ++ MK G P YN+++D G+
Sbjct: 232 FDTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGK 291
Query: 283 A 283
Sbjct: 292 G 292
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 129/283 (45%), Gaps = 16/283 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M GI+ ++ Y +++ F K + +F ++ +P + IL D
Sbjct: 341 YNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGC--SPDVI-TFSILIDG 397
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ R + +K +M +G++ + Y +LI F + + A +L +E G+ +
Sbjct: 398 YCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPN 457
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-----------CVIVNGFSKR 178
+ L+ G ++ LE+ + M+ +++++ +++ G
Sbjct: 458 VVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINE 517
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A ++YE++ +G +P +TY S+I+ C+ +A ++F M KGF VV +
Sbjct: 518 GKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTF 577
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++++ Y K GR+ D + + +M +G N Y +L +HG
Sbjct: 578 TTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTL--IHG 618
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 125/278 (44%), Gaps = 14/278 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYK 64
LH++ ++ ++ + +M + G + AL R ++ L P+ Y
Sbjct: 166 LHFFHQICKPNVI----AFTTLMNGLCREGRVVEAVALL----DRMVEDGLQPNQI-TYG 216
Query: 65 ILCDSLGKSGRAFEILKFFRDMKE-KGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ D + K G L R M+E I + +Y+++I A+ LF E +E
Sbjct: 217 TIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQE 276
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ +L + ++ + G + ++ M +++ V++N K ++
Sbjct: 277 KGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFE 336
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++Y +++ +G IP +TY S+I+ + + AE++F M KG V+ +S ++
Sbjct: 337 AEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILID 396
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
Y R+ D M+L+ +M +G N Y +L +HG
Sbjct: 397 GYCGAKRVDDGMKLLHEMSRRGLVANTITYTTL--IHG 432
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 124/282 (43%), Gaps = 14/282 (4%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ + +M+ GI + Y ++ F G + L E RK+ +P + +L
Sbjct: 269 NLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKM--SPDVV-TFSVLI 325
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
++L K G+ FE + + +M +GI+ + Y S+I F+ + AE +F KG
Sbjct: 326 NALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCS 385
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ F L+ Y V+ ++++ M L + +++GF + AA+ +
Sbjct: 386 PDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDL 445
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD-----------KCVV 236
+++IS G P VT ++++ C G A ++F MQ+ D V
Sbjct: 446 LQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQ 505
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y+ ++ G+ +A L +M +G P+ YNS++D
Sbjct: 506 TYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVID 547
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 123/307 (40%), Gaps = 22/307 (7%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
KL PS + L L R E L FF + + ++ + +L+ V
Sbjct: 139 KLGFHPSLV-TFSTLLHGLCVEDRVSEALHFFHQICKPNVI----AFTTLMNGLCREGRV 193
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN-AELNISDCISCV 170
A L E G+ + + +V + G L ++ M+ + + + I
Sbjct: 194 VEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSA 253
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
I++G K A ++ ++ +G P TY +IN +C G +S+A+++ EM ++
Sbjct: 254 IIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERK 313
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
VV +S ++ K G+ +A L +M P+G PN YNS++D + L E
Sbjct: 314 MSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAE 373
Query: 291 K----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
+ ++ +I Y A+ D +K +E G V + ++ F
Sbjct: 374 RMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGF 433
Query: 335 SKLSQIE 341
+L +
Sbjct: 434 CQLGNLN 440
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 111/244 (45%), Gaps = 14/244 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M G+V ++ Y ++ F ++G+ AAL L E + P+ +L D L
Sbjct: 412 HEMSRRGLVANTITYTTLIHGFCQLGNLN--AALDLLQEMISSGVCPNVVTCNTLL-DGL 468
Query: 71 GKSGRAFEILKFFRDMKE-----------KGILEDPSVYASLICSFASIAEVKVAEELFK 119
+G+ + L+ F+ M++ + D Y LIC + + AEEL++
Sbjct: 469 CNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYE 528
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E +G++ D + ++ ++ +++ ++ +SM + + ++NG+ K
Sbjct: 529 EMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVG 588
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
++V+ ++ +G + +TY ++I+ +C++G + A +F EM G +
Sbjct: 589 RVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIR 648
Query: 240 SMVA 243
+M+
Sbjct: 649 NMLT 652
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 3/236 (1%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y + D L KS + L M++ GI D Y SLI S A +
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++ + D+ F L+ ++EG V + E E M L+ +++ G
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++ ++S+GC P VTY+ +IN YC+ K+F EM Q+G + V Y+ +
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+ Y + G++ A + +M G PN+ YN L +HG N ++EK +++
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL--LHGLCDN-GKIEKALVILA 420
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 120/274 (43%), Gaps = 3/274 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L +M+ GI D Y ++ G A + C +++ ++ P +
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD-ATRMVSCMTKR-EIYPD-VFTF 259
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D+ K GR E +F+ +M + + D Y+ LI + + AEE+F
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG D+ + L+ Y + VE +++ M + + +++ G+ +
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +++ +++ G P +TY +++ C G KA + +MQ+ G D +V Y+ ++
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIR 439
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G + DA + + +G P++W Y ++M
Sbjct: 440 GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 60/108 (55%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++NGF + + A+ +++Q++ G P V Y +II+ C+ A + M++ G
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
VV Y+S+++ +GR DA R+V+ M + P+V+ +N+L+D
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL + KS + +K F +M ++G++ + Y LI + ++ VAEE+F+
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ ++ + L+ + G +EK L ++ M+ ++ +I+ G K
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
A +Y L QG +P TY +++ + GL +A+ +F +M++ G
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 98/242 (40%), Gaps = 3/242 (1%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
+++A K G + + E R LD Y +L L R E + F M
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLD---PDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
KG D Y+ LI + +V+ +LF E ++G++R+ + L+ Y G +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
E+ M ++ + V+++G A+ + + G VTY II
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 208 NAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
C+ G + A ++ + +G + Y++M+ K G R+A L KMK G
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Query: 268 PN 269
PN
Sbjct: 499 PN 500
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 64/124 (51%)
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
E M+ + + C +++N F + A+ ++I G P VT+ S++N +CR
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
A +F +M G+ VV Y++++ K+ ++ +A+ L+ +M+ G P+V Y
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 274 NSLM 277
NSL+
Sbjct: 225 NSLI 228
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 112/282 (39%), Gaps = 38/282 (13%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
++ +E+M+ GI + C C I+ + +A FL + KL PS +L
Sbjct: 101 IYLWEQMQMLGIPHNL-CTCNILLNCFCRCSQLSLALSFLG-KMIKLGHEPSIVTFGSLL 158
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ + R ++ L F M G + +Y ++I +V A +L E+ G+
Sbjct: 159 -NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ + L+ G +V M +KR Y
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCM-------------------TKREIY----- 253
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
P T+ ++I+A + G S+AE+ + EM ++ D +V YS ++
Sbjct: 254 -----------PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
R+ +A + M KGC P+V Y+ L++ + ++K +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+++ SK + Y + ++EQ+ G T ++N +CR S A +M + G
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+ +V + S++ + + R+ DA+ + +M G +PNV IYN+++D ++K +
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQV 202
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 102/246 (41%), Gaps = 6/246 (2%)
Query: 32 FYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGI 91
F K+ DS + ++C PS ++L ++ K + ++ + M+ GI
Sbjct: 59 FMKLDDSLDLFFHMVQCRP-----LPSIADFSRLL-SAISKMKKYDVVIYLWEQMQMLGI 112
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
+ L+ F +++ +A + + G + F L+ + V L
Sbjct: 113 PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY 172
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC 211
+ + M + I I++G K + A+ + ++ G P VTY S+I+ C
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
G +S A ++ M ++ V +++++ K GR+ +A +M + +P++
Sbjct: 233 SSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 272 IYNSLM 277
Y+ L+
Sbjct: 293 TYSLLI 298
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 132/277 (47%), Gaps = 9/277 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ KM+ I LD+ Y I++ K G + LF E E + + ++ Y IL
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI---TTNIITYNIL 304
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+GR + K RDM ++ I + ++ LI SF +++ AEEL KE +G+
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAA 184
D + L+ + +E ++K ++V+ M K + NI +++NG+ K
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR--TFNILINGYCKANRIDDG 422
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++++ ++ +G + VTY ++I +C +G + A+++F EM + +V Y ++
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
G A+ + K++ E ++ IYN + +HG
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNII--IHG 517
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 131/277 (47%), Gaps = 5/277 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M GI D+ Y +++ F K +K + S+ D + + IL +
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD---PNIRTFNILING 412
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ R + L+ FR M +G++ D Y +LI F + ++ VA+ELF+E + + +
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G EK LE+ E ++ +++ + I +I++G A ++
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L +G PG TY +I C+ G S+AE +F +M++ G Y+ ++ + G
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDM--HGRAK 284
+++L+ ++K G + ++DM GR K
Sbjct: 593 DATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLK 629
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + + KSG+ ++ R M+E+ I D Y+ +I + A LF E E
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ ++ + L+ + G + +++ M ++N + V+++ F K
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++++I +G P +TY S+I+ +C+ KA ++ M KG D + ++ ++
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y K RI D + L KM +G + YN+L+
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/276 (19%), Positives = 115/276 (41%), Gaps = 19/276 (6%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + L SG+ E + M E G + Y ++ + +A EL ++ EE+
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D + ++ + G ++ + M+ + + +++ GF +
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K+ +I + P VT++ +I+++ + G +AE++ EM +G + Y+S++ +
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREF 305
K + A ++V M KGC+PN+ +N L I+ Y A
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNIL-------------------INGYCKANRI 419
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
D ++ + + + G V D ++ F +L ++
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N F + R A ++I G P +T++++IN C G S+A ++ M +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN---- 285
G ++ +++V +G+ +AM L+ KM GC+PN Y ++++ ++
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 286 ---LRQLE---------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
LR++E KY+ +I D +NE M G + I++G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 334 F 334
F
Sbjct: 308 F 308
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 38/225 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + KM G+V D+ Y +++ F ++G LF E SRK+ P + YKIL
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV---PPNIVTYKIL 479
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L +G + + L+ F +++ + D +Y +I + ++V A +LF KG+
Sbjct: 480 LDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + +++ G K+ A
Sbjct: 540 KPGVKTY-----------------------------------NIMIGGLCKKGPLSEAEL 564
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ ++ G P TY +I A+ G +K+ K+ E+++ GF
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 54/108 (50%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+ + +K + Y + + +Q+ +G T + +IN +CR A ++ + G
Sbjct: 94 LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 153
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ + +S+++ GR+ +A+ LV +M G +P++ N+L++
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 117/256 (45%), Gaps = 3/256 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ F K G E+ + E + L L Y L +L K + + L F
Sbjct: 52 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG---YNCLISALCKDEKVQDALNMFG 108
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
DM KG D + SLI + + + A L+++ +G++ + + L+ ++ G
Sbjct: 109 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 168
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ L++V M + D ++ + + ++E ++S+G P ++
Sbjct: 169 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 228
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+IN CR G A + +M +G +V Y+S++ KTGR ++A+ L K++ +
Sbjct: 229 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 288
Query: 265 GCEPNVWIYNSLMDMH 280
G P+ YN+L+ H
Sbjct: 289 GICPDAITYNTLISWH 304
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL D K GR E +M KG+ + Y LI + +V+ A +F +
Sbjct: 52 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 111
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
KG D+ F L+ + E+ L + + M E I++ I+ +++ F +R A
Sbjct: 112 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML-LEGVIANTITYNTLIHAFLRRGAM 170
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+K+ ++ +GC +TY +I A CR G K +F +M KG + ++ + +
Sbjct: 171 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 230
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAK 284
+ +TG I+ A+ + M +G P++ YNSL++ GRA+
Sbjct: 231 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 276
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCD 68
++M G+ L++ Y ++ A K + +F + S+ K D+ ++ ++
Sbjct: 73 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF----- 127
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K + E L ++DM +G++ + Y +LI +F ++ A +L + +G
Sbjct: 128 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 187
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKV 187
D + L+ G +EK L + E M + LN ++ ISC +++NG + A++
Sbjct: 188 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN-ISCNILINGLCRTGNIQHALEF 246
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+I +G P VTY S+IN C+ G +A +F ++Q +G + Y+++++ + K
Sbjct: 247 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 306
Query: 248 TGRIRDAMRLVAKMKPKGCEPN--VW 271
G DA L+++ G PN W
Sbjct: 307 EGMFDDAHLLLSRGVDSGFIPNEVTW 332
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%)
Query: 86 MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
M G D Y +LI + A EL E + KG ++ + L+ + +EG
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
+E+ V++ M L ++ +++ K A+ ++ + S+GC P T+ S
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
+I C++ + +A ++ +M +G + Y++++ + + G +++A++LV M +G
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184
Query: 266 CEPNVWIYNSLMDMHGRAKNLRQ 288
C + YN L+ RA N+ +
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEK 207
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 3/246 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q L+ + M S G D + ++ K+ E+ L+ + L+ ++T Y
Sbjct: 101 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY---QDMLLEGVIANTITY 157
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + + G E LK DM +G D Y LI + ++ LF++
Sbjct: 158 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 217
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ + L+ G ++ LE + M + L ++NG K
Sbjct: 218 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 277
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ ++++L +G P +TY ++I+ +C+ G++ A + GF V + +V+
Sbjct: 278 ALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 337
Query: 244 MYGKTG 249
+ K G
Sbjct: 338 NFIKEG 343
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++E ++S GC P TY ++I C+ G A ++ EMQ KG + V+ Y+ ++ +
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K GR+ +A ++ +M KG N YN L+
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLI 91
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 3/280 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KMK + D Y +++ F G+S+ V ++ + K D + Y + D+
Sbjct: 367 FWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIW---NAMKADGYNDNVVAYTAVIDA 423
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L + GR FE L+ F +MK+KGI+ + Y SLI F A ELFK + G +
Sbjct: 424 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPN 483
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + Y + G K ++ E MK+ + ++ G +K A +V+
Sbjct: 484 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 543
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L + G P +TY +I + + +A K+F +M + V+ +S++ K G
Sbjct: 544 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAG 603
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
R +A ++ ++K EP YN+L+ GR ++++
Sbjct: 604 RGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEV 643
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 157/349 (44%), Gaps = 25/349 (7%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK AGIVL++ Y ++ K G + ++ + +D S Y +L + GK
Sbjct: 230 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY---KVMMVDGVVPSVRTYSVLMVAFGK 286
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK---EAEEKGMLRD 129
+L R+M+ G+ P+VY+ IC + + + +E ++ E E +G D
Sbjct: 287 RRDVETVLWLLREMEAHGV--KPNVYSYTIC-IRVLGQARRFDEAYRILAEMENEGCKPD 343
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + + G + +V MK ++ +++ F+ + ++++
Sbjct: 344 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWN 403
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ + G V Y ++I+A C++G +A ++F EM+QKG +Y+S+++ + K
Sbjct: 404 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 463
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA-KNLRQLEKY---------------T 293
R DA+ L M G +PN + + ++ +G++ ++++ +++Y
Sbjct: 464 RFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 523
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
V+ + M + ++E + G D +M+ SK S+ +E
Sbjct: 524 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDE 572
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 122/273 (44%), Gaps = 3/273 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+K KS G+ L +G Y ++ + LF E ++L P Y +L D++
Sbjct: 823 KKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLF--AEMKELGCGPDE-FTYNLLLDAM 879
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GKS R E+LK +M KG Y ++I ++ A +L+ +G
Sbjct: 880 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 939
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ ++ G +E + M + I +++NG +++
Sbjct: 940 CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 999
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ QG P +Y II+ C+ G + F ++ + G + ++ Y+ ++ GK+ R
Sbjct: 1000 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 1059
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ +A+ L +M+ KG PN++ YNSL+ G+A
Sbjct: 1060 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKA 1092
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +MK G D Y +++A +G S ++ + E S+ Y +
Sbjct: 857 FAEMKELGCGPDEFTYNLLLDA---MGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISG 913
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KS R + + + ++ +G P Y L+ ++ AE LF E E G +
Sbjct: 914 LVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 973
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
++ L+ + G EK + + M + +N +I++ K + +
Sbjct: 974 CTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFR 1033
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
QL+ G P +TY +I+ + +A +F EMQ+KG + Y+S++ GK G
Sbjct: 1034 QLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAG 1093
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ +A ++ ++ KG +PNV+ YN+L+
Sbjct: 1094 KAAEAGKMYEELLTKGWKPNVFTYNALI 1121
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 37/259 (14%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L L K +A E + + K G+ Y SLIC + +AE LF E +E G
Sbjct: 805 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELG 864
Query: 126 MLRDLEVFLKLVLMYIEEGM-VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D E L+L + + M +E+ L+V E M + I++G K R A
Sbjct: 865 CGPD-EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 923
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ---------------- 228
+ +Y L+SQG P TY +++ + G AE +F EM +
Sbjct: 924 IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 983
Query: 229 -------------------KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
+G + + +Y+ ++ K G++ D + ++ G EP+
Sbjct: 984 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 1043
Query: 270 VWIYNSLMDMHGRAKNLRQ 288
+ YN L+D G++K L +
Sbjct: 1044 LITYNLLIDGLGKSKRLEE 1062
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y I+ K E+ L+ S+ TP + Y L D L K+GR + F
Sbjct: 907 YNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCT---YGPLLDGLLKAGRIEDAENLFN 963
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+M E G + ++Y L+ + LF++ ++G+ D++ + ++ + G
Sbjct: 964 EMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1023
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ L + L ++++G K + AV ++ ++ +G +P TY
Sbjct: 1024 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1083
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+I + G ++A K++ E+ KG+ V Y++++ Y +G A +M
Sbjct: 1084 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVG 1143
Query: 265 GCEPN 269
GC PN
Sbjct: 1144 GCLPN 1148
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 127/297 (42%), Gaps = 24/297 (8%)
Query: 46 LECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSF 105
+E E K D+ + T + ++LCD+ GR + F MK+ D Y +L+ F
Sbjct: 335 MENEGCKPDVI-THTVLIQVLCDA----GRISDAKDVFWKMKKSDQKPDRVTYITLLDKF 389
Query: 106 ASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD 165
A E + E++ + G ++ + ++ + G V + LE+ + MK +
Sbjct: 390 ADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQ 449
Query: 166 CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
+++GF K + A+++++ + G P T+ IN Y + G KA + +
Sbjct: 450 YSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYEL 509
Query: 226 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
M+ KG VVA ++++ K+GR+ A R+ ++K G P+
Sbjct: 510 MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTIT------------- 556
Query: 286 LRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT +I + A +FD VK + + N V D + ++ K + +E
Sbjct: 557 ------YTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDE 607
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 136/345 (39%), Gaps = 26/345 (7%)
Query: 18 IVLDSGCYCQIMEAFYKIGDSEK----VAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
++ D C I+ +F KIG ++ + FL+ S K D + + M IL K
Sbjct: 724 LIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGS-KTDRSSCHSLMEGIL-----KK 777
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
+ ++F + GI D LI + A EL K+ + G+ +
Sbjct: 778 AGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSY 837
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ ++E +++ + MK + ++++ K +KV E++
Sbjct: 838 NSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 897
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G VTY +II+ + +A ++ + +GF Y ++ K GRI D
Sbjct: 898 KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIED 957
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVIS 297
A L +M GC+ N IYN L++ H A N + ++ YT +I
Sbjct: 958 AENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 1017
Query: 298 AYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
A + + + ++ + G D +++ K ++EE
Sbjct: 1018 TLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 1062
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 9/190 (4%)
Query: 19 VLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
+L+ GC Y ++ G++EKV LF + + ++ S Y I+ D+L K
Sbjct: 965 MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS---YTIIIDTLCK 1021
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G+ + L +FR + E G+ D Y LI ++ A LF E ++KG++ +L
Sbjct: 1022 AGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYT 1081
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+L + G + ++ E + + ++ G+S + +A Y ++I
Sbjct: 1082 YNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMI 1141
Query: 193 SQGCIPGQVT 202
GC+P T
Sbjct: 1142 VGGCLPNSST 1151
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 129/296 (43%), Gaps = 16/296 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ +L + G + + F +M++ G+ + Y ++I + I ++ A E F +
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++G+ D + L+ + G + K E++ + N +++ + I+N K
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVM 516
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +++ ++ G P V Y+ +++ YC +G KA +VF M G + V Y ++V
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD--------------MHGRAKNLRQ 288
Y K GRI + + L +M KG +P+ +YN ++D H ++
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636
Query: 289 LEK--YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ K Y+ V+ R FD + + E R ID M+ + ++EE
Sbjct: 637 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 692
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 157/373 (42%), Gaps = 54/373 (14%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D Y +++ F+K GD K LF E R + P Y + +L K+ +
Sbjct: 218 DVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI---PPDFVTYSSVVHALCKARAMDKAE 274
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
F R M KG+L + Y +LI ++S + K A +FKE + +L D+ F L+
Sbjct: 275 AFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSL 334
Query: 141 IEEGMVEKTLEVVESM---------------------KNAELNISD-------------- 165
+ G +++ +V ++M K ++++D
Sbjct: 335 CKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVI 394
Query: 166 CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
C V++ ++ A+ ++ ++ G P +TY ++I A CRIG A + F +
Sbjct: 395 CTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQ 454
Query: 226 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGR 282
M +G AY ++ + G + A L++++ G ++ +++S+++ GR
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGR 514
Query: 283 ---AKNLRQLE----------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGI 329
A+N+ L Y+ ++ Y + + + ++ ++ G + + G
Sbjct: 515 VMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574
Query: 330 MVGVFSKLSQIEE 342
+V + K+ +I+E
Sbjct: 575 LVNGYCKIGRIDE 587
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 43 ALFLECESRKLD---LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYA 99
ALF SR L+P+S H Y IL D ++ R L FF + G+ D +
Sbjct: 92 ALFNRAASRAQGPRVLSPTS-HTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIAN 150
Query: 100 SLICSFASIAEVKVAEE----LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
L+ F E K +E L E G + D+ + L+ ++G + +++
Sbjct: 151 HLLKGFC---EAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRM 207
Query: 156 MKNAELNISDCISC--VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M S + +++GF K A ++++++ +G P VTY+S+++A C+
Sbjct: 208 MAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKA 267
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
KAE +M KG Y++++ Y TG+ ++A+R+ +M+ + P+V +
Sbjct: 268 RAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTF 327
Query: 274 NSLM 277
N LM
Sbjct: 328 NMLM 331
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 9/264 (3%)
Query: 17 GIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
G+ LD + I+ K+G D++ + L + + L P++ +Y +L D
Sbjct: 494 GMHLDIVLFSSIINNLCKLGRVMDAQNIFDL-----TVNVGLHPTAV-VYSMLMDGYCLV 547
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+ + L+ F M GI + VY +L+ + I + LF+E +KG+ ++
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 607
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ E G M + + ++ C +++ G K R + A+ ++++L +
Sbjct: 608 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 667
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+T ++I + +A+ +F + + G CVV YS M+ K G + +
Sbjct: 668 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEE 727
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLM 277
A + + M+ GCEP+ + N ++
Sbjct: 728 AEDMFSSMQNAGCEPDSRLLNHVV 751
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/300 (19%), Positives = 117/300 (39%), Gaps = 38/300 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ G+ + Y ++ A +IG + F + + + + Y L
Sbjct: 417 FNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGV---APDKYAYHCLIQG 473
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G + + ++ G+ D +++S+I + + V A+ +F G+
Sbjct: 474 FCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPT 533
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
V+ L+ Y G +EK L V ++M +A + +D + +VNG+ K + ++
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKC------------- 234
+++ +G P + Y II+ G A+ F EM + G +KC
Sbjct: 594 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR 653
Query: 235 --------------------VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
++ ++M+A +T R+ +A L A + G P V Y+
Sbjct: 654 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++ M SAGI + Y ++ + KIG ++ +LF E + + ST +Y
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK---PSTILY 607
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+ D L ++GR F +M E GI + Y+ ++
Sbjct: 608 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL--------------------- 646
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ ++ F + + ++ E + ++++ ++ +I F RR A
Sbjct: 647 RGLFKN-RCFDEAIFLFKELRAMNVKIDIIT------------LNTMIAGMFQTRRVEEA 693
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ + G +P VTY+ +I + GL +AE +F MQ G
Sbjct: 694 K-DLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 161 LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ-GCIPGQVTYASIINAYCRIGLYSKA 219
L + I+ ++ GF + + A+ + + GC+P +Y+ ++ + C G +A
Sbjct: 142 LRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201
Query: 220 EKVFIEMQQKGFDKC---VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+ + + M +G C VVAY++++ + K G + A L +M +G P+ Y+S+
Sbjct: 202 DDL-LRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSV 260
Query: 277 MDMHGRAKNLRQLE----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGG 320
+ +A+ + + E Y +I Y+ ++ V+ + E R
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 320
Query: 321 VIDRAMAGIMVGVFSKLSQIEE 342
+ D +++G K +I+E
Sbjct: 321 LPDVVTFNMLMGSLCKYGKIKE 342
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 116/228 (50%), Gaps = 1/228 (0%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E R TP Y ++ + + + GR + ++F +++ G + Y ++ +
Sbjct: 220 EMRDKGCTPDIV-TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTA 278
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ AEEL E +KG ++ F L+ +G+VE LEV+E + + +
Sbjct: 279 ERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSY 338
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ F K++ A+ + ++S+GC P V+Y +++ A CR G A ++ +++
Sbjct: 339 NPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 398
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
KG +++Y++++ K G+ ++A+ L+ +M KG +P++ Y+++
Sbjct: 399 KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 446
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 117/273 (42%), Gaps = 20/273 (7%)
Query: 67 CDSLGKS----GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
CD+L + GR L +M + + D Y L+ + + K A +L E
Sbjct: 163 CDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 222
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+KG D+ + +V +EG V+ +E ++++ + + +++ G +
Sbjct: 223 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 282
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ ++ +GC P VT+ +I+ CR GL A +V ++ + G ++Y+ ++
Sbjct: 283 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLL 342
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLE----- 290
+ K ++ AM + M +GC P++ YN+L+ R+ L QL+
Sbjct: 343 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 402
Query: 291 ----KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y TVI A + ++ NE G
Sbjct: 403 PVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 435
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 165 DCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
D +C ++ G R A+ V ++++ + C+P VTY ++ A C+ Y +A K+
Sbjct: 159 DAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLL 218
Query: 224 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
EM+ KG +V Y+ +V + GR+ DA+ + + GCEPN YN ++
Sbjct: 219 DEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 272
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 3/227 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L E++ G +S Y ++ AF K +K A SR P Y
Sbjct: 317 EPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC--YPDIVS-Y 373
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L +L +SG ++ +K+KG Y ++I + K A EL E
Sbjct: 374 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 433
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ D+ + + E +E + +++ + + + I+ G KRR +
Sbjct: 434 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 493
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
A+ ++ +I GC+P + TY +I GL +A + E+ +G
Sbjct: 494 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 95/225 (42%), Gaps = 6/225 (2%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + +L L + G L+ + + G + Y L+ +F ++ A
Sbjct: 297 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMA 356
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN---AELNISDCISCVIVN 173
+G D+ + L+ G V+ +E++ +K+ A + IS +++
Sbjct: 357 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS---YNTVID 413
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G +K A+++ +++S+G P +TY++I CR A + F ++Q G
Sbjct: 414 GLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP 473
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y++++ K A+ L A M GC PN Y L++
Sbjct: 474 NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE 518
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 155/347 (44%), Gaps = 39/347 (11%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD--LTPSSTHMYK 64
LH+++ + + G L+ Y ++ K+G++ + RK+D L ++ MY
Sbjct: 138 LHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVL-----RKIDGKLVNTNVVMYS 192
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ DSL K E + + M K + D +++LI F + + K A LF E
Sbjct: 193 TIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLT 252
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK------NAELNISDCIS---------- 168
+ D+ F LV +EG ++T V+ M N ++ + I
Sbjct: 253 NINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHS 312
Query: 169 -CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ 227
+I+ K + A+ ++ ++ +G P +VTY+S+I+ C+ S A ++ +M
Sbjct: 313 YTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMH 372
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAK 284
+G V+ Y+S + K ++ A+ LV K+K +G +PN+ YN L+D GR +
Sbjct: 373 ARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFE 432
Query: 285 NLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNG----GVIDRAMA 327
N + VI + + + + V YN +NG G+ D AM
Sbjct: 433 NAQ-------VIFQDLLIKGYKVTVWTYN-IMINGLCLEGLFDEAMT 471
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 36/223 (16%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
+TP H Y I+ L K E L F +M+ KGI D Y+SLI + A
Sbjct: 306 VTPD-VHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHA 364
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
EL + +G D+ + + + V+K + +V+ +K+
Sbjct: 365 WELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKD---------------- 408
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
QG P TY +I+ C+ G + A+ +F ++ KG+
Sbjct: 409 -------------------QGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVT 449
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
V Y+ M+ G +AM L+ KM+ GC P+V Y +++
Sbjct: 450 VWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETII 492
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/228 (18%), Positives = 101/228 (44%), Gaps = 1/228 (0%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEI-LKFFRDMKEKGILEDPSVYASLICSFASIAE 110
+++ +PS KIL + + + I + + ++ I + ++I + + E
Sbjct: 39 RMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGE 98
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
+ A + + + G D L+ G V + L + + +++ +
Sbjct: 99 MDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGI 158
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++NG K AA++V ++ + V Y++II++ C+ L ++A +++ +M K
Sbjct: 159 LINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKK 218
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
VV +S+++ + G+ ++A L +M P+V +N L+D
Sbjct: 219 VSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD 266
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 86/199 (43%), Gaps = 2/199 (1%)
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G L+V+ + +N + + I++ K + A ++Y Q+I + P VT+
Sbjct: 167 GETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTF 226
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+++I +C +G + +A +F EM + V ++ +V K G ++ ++A M
Sbjct: 227 SALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMK 286
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
+ + N + + ++ G+ + + YT +I + D + +NE R G D
Sbjct: 287 EVNQVNKAKH--VFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPD 344
Query: 324 RAMAGIMVGVFSKLSQIEE 342
+ ++ K +I
Sbjct: 345 KVTYSSLIDGLCKSERISH 363
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/273 (17%), Positives = 113/273 (41%), Gaps = 27/273 (9%)
Query: 23 GCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKF 82
CYC + E + K+ + ++ L T + K LC +G+ E L F
Sbjct: 91 NCYCHLGEMDFAFSVLAKILKMGYHPDTITL------TTLIKGLC----LNGKVHEALHF 140
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
+ +G + Y LI + E + A ++ ++ + K + ++ ++ ++ +
Sbjct: 141 HDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCK 200
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
E +V + E+ M +++ ++ GF + A ++ +++ P T
Sbjct: 201 EKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCT 260
Query: 203 YASIINAYCR-----------------IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ +++A C+ + +KA+ VF + ++ V +Y+ ++
Sbjct: 261 FNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRL 320
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K + +A+ L +M+ KG P+ Y+SL+D
Sbjct: 321 CKIKMVDEALSLFNEMRCKGITPDKVTYSSLID 353
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 40/235 (17%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
M ++LC+S G+ E + M EKGI D +Y + + + +V LF +
Sbjct: 399 MLEVLCNS----GKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKM 454
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G+ DL + ++ Y G+V+K
Sbjct: 455 KASGIAPDLFTYNIMISSYGRVGLVDK--------------------------------- 481
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++E++ + C P +TY ++IN + G +A +F EMQ+KG+D V YS++
Sbjct: 482 --ASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTL 539
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-MHGRAKNLRQLEKYTTV 295
+ +GK+ ++ A L +M +GC PN+ YN L+D + R K + Y T+
Sbjct: 540 IECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAEAHKHYETM 594
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 133/280 (47%), Gaps = 6/280 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++++M S G L+ Y ++EA K +KV +F+ + + D P+ Y +
Sbjct: 276 LSFFDEMVSRGCALNLIAYNTVIEALGKNKMVDKV--IFVLSKMIESDCQPNQ-FTYSLT 332
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L G+ + + D+ ++ + + S+Y+ L+ S A +F
Sbjct: 333 LDILATEGQLHRLNEVL-DICDRYL--NKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHE 389
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + F+ ++ + G + ++++ M ++ + ++ + K +
Sbjct: 390 SGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFIST 449
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++ + G P TY +I++Y R+GL KA +F EM+ V+ Y++++ G
Sbjct: 450 LFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLG 509
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
K G + +A L +M+ KG +P+V+ Y++L++ G++ +
Sbjct: 510 KNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKV 549
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 149/382 (39%), Gaps = 53/382 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YE+M G LD Y +++A K G ++ +F E K + Y IL
Sbjct: 209 YEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVF---EDMKQKYCVPDAYTYTILIRM 265
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV-KVAEELFKEAEEKGMLR 128
GK+G+ ++ L FF +M +G + Y ++I + V KV L K E
Sbjct: 266 SGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPN 325
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEV----------------VESM-KNAELNISDCISCVI 171
L L ++ EG + + EV V+S+ K+ + + + C +
Sbjct: 326 QFTYSLTLDIL-ATEGQLHRLNEVLDICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRM 384
Query: 172 VNGF--SKRRAYWA-------------AVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
N R A+ + A+ + + +G Y + +A ++
Sbjct: 385 WNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQV 444
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
S +F +M+ G + Y+ M++ YG+ G + A L +M+ C+P+V YN+L
Sbjct: 445 SFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTL 504
Query: 277 MDMHGRAKNLRQLE----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGG 320
++ G+ +L + Y+T+I + + + DM ++E G
Sbjct: 505 INCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGC 564
Query: 321 VIDRAMAGIMVGVFSKLSQIEE 342
+ + I++ + + E
Sbjct: 565 IPNIVTYNILLDCLERRGKTAE 586
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 72/164 (43%)
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
+V ++ V K EV E M + ++++ +K A +V+E + +
Sbjct: 192 IVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVFEDMKQKY 251
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C+P TY +I + G K F EM +G ++AY++++ GK + +
Sbjct: 252 CVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNKMVDKVI 311
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAY 299
+++KM C+PN + Y+ +D+ L +L + + Y
Sbjct: 312 FVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVLDICDRY 355
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 95/244 (38%), Gaps = 35/244 (14%)
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
+ FE+ + +M KG D Y L+ + A V A ++F++ ++K + D +
Sbjct: 204 KGFEV---YEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVFEDMKQKYCVPDAYTYT 260
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ M + G K L + M + ++ ++ K + + V ++I
Sbjct: 261 ILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNKMVDKVIFVLSKMIES 320
Query: 195 GCIPGQVT--------------------------------YASIINAYCRIGLYSKAEKV 222
C P Q T Y+ ++ + C+ G S+A V
Sbjct: 321 DCQPNQFTYSLTLDILATEGQLHRLNEVLDICDRYLNKSIYSYLVKSLCKSGHASEAHNV 380
Query: 223 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
F M A+ SM+ + +G+ +A+ L+ M KG + ++ +YN + G+
Sbjct: 381 FCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGK 440
Query: 283 AKNL 286
K +
Sbjct: 441 LKQV 444
>gi|356573733|ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Glycine max]
Length = 752
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 145/312 (46%), Gaps = 22/312 (7%)
Query: 27 QIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDM 86
I +A +GD + +LF R+ PS Y +L D L + R FE ++ D
Sbjct: 91 HIAQALKVVGDVDACLSLF-RWAKRQAWYVPSDD-CYVMLFDGLNQK-RDFEGIQLLFDE 147
Query: 87 KEKGILEDPSVYAS---LICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+ S++A+ +I A +++V+ FK+ G D E + L+ +++ +
Sbjct: 148 MVGDSADGVSLFAACNRVIRYLAKAEKLEVSFCCFKKILNAGCKVDTETYNSLITLFLNK 207
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G+ K E+ ESM+ A ++ +++ +K AA K+++++ +G PG +
Sbjct: 208 GLPYKAFEMYESMEKAGCSLDGSTYELMIPNLAKSGRLDAAFKLFQEMKVRGFRPGLNVF 267
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
AS++++ + G A KV++EM+ G+ Y S++ Y K+G++ A+RL +M+
Sbjct: 268 ASLVDSMGKAGRLDSAMKVYMEMRGYGYKPPPTIYVSLIESYVKSGKLETALRLWDEMRM 327
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLR-------QLEK---------YTTVISAYNMAREFDM 307
G PN +Y +++ H ++ L +EK Y ++ + + + D
Sbjct: 328 AGFRPNFGLYTLIIESHAKSGKLEIAMSTFLDMEKAGFLPTPSTYACLLEMHAASGQIDP 387
Query: 308 CVKFYNEFRMNG 319
+K YN G
Sbjct: 388 AMKLYNSMTNAG 399
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 119/268 (44%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++K+ +AG +D+ Y ++ F G K ++ E L S+ Y+++ +
Sbjct: 182 FKKILNAGCKVDTETYNSLITLFLNKGLPYKAFEMYESMEKAGCSLDGST---YELMIPN 238
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR K F++MK +G +V+ASL+ S + A +++ E G
Sbjct: 239 LAKSGRLDAAFKLFQEMKVRGFRPGLNVFASLVDSMGKAGRLDSAMKVYMEMRGYGYKPP 298
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+++ L+ Y++ G +E L + + M+ A + + +I+ +K A+ +
Sbjct: 299 PTIYVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTLIIESHAKSGKLEIAMSTFL 358
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G +P TYA ++ + G A K++ M G + Y+ ++ +
Sbjct: 359 DMEKAGFLPTPSTYACLLEMHAASGQIDPAMKLYNSMTNAGLRPGLSTYTVLLTLLANKK 418
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ A +++ +MK G +V + LM
Sbjct: 419 LVDVAAKILLEMKAMGYSVDVTASDILM 446
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 4/209 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
++ L +++M+ AG + G Y I+E+ K G E + FL+ E TPS+ Y
Sbjct: 316 ETALRLWDEMRMAGFRPNFGLYTLIIESHAKSGKLEIAMSTFLDMEKAGFLPTPST---Y 372
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + SG+ +K + M G+ S Y L+ A+ V VA ++ E +
Sbjct: 373 ACLLEMHAASGQIDPAMKLYNSMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKA 432
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G D+ ++++YI+EG V+ L + M ++ + ++ I + K + +
Sbjct: 433 MGYSVDVTAS-DILMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLFES 491
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCR 212
A + E ++ + Y SI+ R
Sbjct: 492 AKPLLETYVNSAAKVDLILYTSILAHLVR 520
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+Y +L L K GR +M + + D +YA+L+ F E+ A ELF+
Sbjct: 451 QIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEV 510
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
KG+ + + ++ + G + + V MK A + +++G+ K+
Sbjct: 511 VMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHD 570
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+A+K++ Q++ Q P V Y S+IN +C+I S+AEKVF MQ + VV Y+
Sbjct: 571 LDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTI 630
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ + KTG+ A M C PN ++ L++
Sbjct: 631 LIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLIN 668
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 156/357 (43%), Gaps = 37/357 (10%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF-----LECESRKLDLTPSSTHMYKI 65
+M G+ ++ + I++A YK G +K A + + CE D+T Y I
Sbjct: 299 NEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEP---DITT-----YNI 350
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + GR E +F KE+ +L + Y L+ ++ + +A ++ + E G
Sbjct: 351 LINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETG 410
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
DL + + + G ++ L V E M + I V+++G K+ + AA
Sbjct: 411 DKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAK 470
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ +++ P YA++++ + R KA ++F + KG D VV Y+ M+
Sbjct: 471 LLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGL 530
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-------------- 291
K G++ DA+ V KMK P+ + +++++D + + +L K
Sbjct: 531 CKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNV 590
Query: 292 --YTTVISAY----NMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YT++I+ + +M+R + + F + V+ I++G FSK + E+
Sbjct: 591 VAYTSLINGFCKIADMSRA-EKVFRAMQSFNLEPNVVTYT---ILIGGFSKTGKPEK 643
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 8/206 (3%)
Query: 95 PSVYA--SLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI------EEGMV 146
P V A SL+ +V VA EL+ + E+G L++ + + I + G V
Sbjct: 162 PCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKV 221
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
E+ ++++ + VI++G+ K+ A +V+E+L +G +P TY ++
Sbjct: 222 EEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGAL 281
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+ +C+ G + +++ EM G + V ++S++ K G + A ++ M GC
Sbjct: 282 IDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGC 341
Query: 267 EPNVWIYNSLMDMHGRAKNLRQLEKY 292
EP++ YN L++ +++ E++
Sbjct: 342 EPDITTYNILINFSCSGGRIKEAEEF 367
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 7/208 (3%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA-EEKGMLRDLEVFLKL 136
EI DMK + S+IC +A V A ++F E + L
Sbjct: 111 EIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSL 170
Query: 137 VLMYIEEGMVEKTLEVVESM------KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ G V+ E+ + M +L + + ++V G K+ +
Sbjct: 171 LNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDD 230
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
GC+P V Y II+ YC+ G +A +VF E++ KGF + Y +++ + K G+
Sbjct: 231 RWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGK 290
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +L+ +M G NV ++NS++D
Sbjct: 291 FQVVDQLLNEMNVMGLNVNVKVFNSIID 318
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 117/286 (40%), Gaps = 39/286 (13%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y ++ D K G + F ++K KG L Y +LI F + +V ++L E
Sbjct: 243 YNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMN 302
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ +++VF ++ + G+V+K E++ M +++N
Sbjct: 303 VMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIK 362
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM- 241
A + E+ + +P + +Y +++AYC+ G Y A + ++ + G +V+Y +
Sbjct: 363 EAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFI 422
Query: 242 --------------------------------VAMYG--KTGRIRDAMRLVAKMKPKGCE 267
V M G K GR A L+++M +
Sbjct: 423 HGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQ 482
Query: 268 PNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYN 313
P+ ++Y +L+D G +N +L+K T + M++ D V YN
Sbjct: 483 PDAYMYATLVD--GFIRN-NELDKATELFEVV-MSKGIDPGVVGYN 524
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 121/284 (42%), Gaps = 18/284 (6%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
D+ Y +++ F + + +K LF S+ +D P Y ++ L K G+ + +
Sbjct: 484 DAYMYATLVDGFIRNNELDKATELFEVVMSKGID--PGVVG-YNVMIKGLCKCGKMTDAV 540
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ MK D ++++I + ++ A ++F + ++ ++ + L+ +
Sbjct: 541 SYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGF 600
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ + + +V +M++ L + +++ GFSK A +E ++ C+P
Sbjct: 601 CKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPND 660
Query: 201 VTYASIINAYCRIG----LYSKAEK--------VFIEMQQKGFDKCVVAYSSMVAMYGKT 248
T+ +IN I L K E+ F M +G+ + + Y+S++ K
Sbjct: 661 TTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKH 720
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
G + A L KM KG + +++L+ G++K R +
Sbjct: 721 GMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNI 764
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 96/249 (38%), Gaps = 39/249 (15%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
K LCD G+ E K D G + + Y +I + ++K A +F+E +
Sbjct: 213 KGLCDV----GKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKL 268
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG L LE + L+ + + G + +++ M LN++ + I++ K
Sbjct: 269 KGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDK 328
Query: 184 AVKVYEQLISQGCIPGQVTYASIIN----------------------------------- 208
A ++ + GC P TY +IN
Sbjct: 329 AAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMH 388
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
AYC+ G Y A + ++ + G +V+Y + + G I A+ + KM KG P
Sbjct: 389 AYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFP 448
Query: 269 NVWIYNSLM 277
+ IYN LM
Sbjct: 449 DAQIYNVLM 457
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 12/192 (6%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
LK F M ++ + Y SLI F IA++ AE++F+ + + ++ + L+
Sbjct: 575 LKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGG 634
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ--------- 190
+ + G EK E M +D ++NG + ++ E+
Sbjct: 635 FSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDF 694
Query: 191 ---LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+IS+G TY SII C+ G+ A+ + +M +KGF V +S+++ +
Sbjct: 695 FATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQ 754
Query: 248 TGRIRDAMRLVA 259
TG+ ++ +++
Sbjct: 755 TGKSKEWRNIIS 766
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 127/272 (46%), Gaps = 3/272 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++M+S I + Y +M K G + AL + R ++ P+ Y L
Sbjct: 164 LELMQEMRSRNIERNVHTYTALMNVCIKCG--KLPLALDIYNSMRAVNCMPNVV-TYNTL 220
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D GK G+ + MK +G+ Y +LI + + + A +++ G
Sbjct: 221 VDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGF 280
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ Y + + K LEV + M ++ S +++ K + A++
Sbjct: 281 TPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQWETALR 340
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++ ++ C+P VTY S++ A + G + KA +VF +M G VV Y+++++ Y
Sbjct: 341 IFNEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTYTALISAYE 400
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ G+ + A++ KM +GC+P+ +YN+++D
Sbjct: 401 RGGQWQKALQAFHKMCVQGCKPDAIVYNAIID 432
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 117/253 (46%), Gaps = 40/253 (15%)
Query: 97 VYASLICSFASIAEVKVAEELF---KEAEEKGMLR---DLEVFLKLVLMYIEEGMVEKTL 150
++ +L + + + + A ELF + A E+ LR D+ + + + I V++ L
Sbjct: 105 IFRALHHDLSRLGKDRRAMELFDWLRSANERSPLRALCDVYSYTATISLCIHGQDVDRAL 164
Query: 151 EVVESMK--NAELNISD-------CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
E+++ M+ N E N+ CI C + A+ +Y + + C+P V
Sbjct: 165 ELMQEMRSRNIERNVHTYTALMNVCIKCGKLP---------LALDIYNSMRAVNCMPNVV 215
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY ++++ Y ++G + +A V M+ +G + + Y++++ + R+A+ + ++
Sbjct: 216 TYNTLVDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRL 275
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNL----------------RQLEKYTTVISAYNMAREF 305
G PN YN+L+ +G+ L R + Y+++ISA A ++
Sbjct: 276 LSDGFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQW 335
Query: 306 DMCVKFYNEFRMN 318
+ ++ +NE + +
Sbjct: 336 ETALRIFNEMQQD 348
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 112/250 (44%), Gaps = 9/250 (3%)
Query: 37 DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
D ++ L E SR ++ + H Y L + K G+ L + M+ + +
Sbjct: 159 DVDRALELMQEMRSRNIE---RNVHTYTALMNVCIKCGKLPLALDIYNSMRAVNCMPNVV 215
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
Y +L+ + + + + A + + +G+ L + L++ + L V + +
Sbjct: 216 TYNTLVDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRL 275
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ + +++ + K A++VY++++ Q +TY+S+I+A + G +
Sbjct: 276 LSDGFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQW 335
Query: 217 SKAEKVFIEMQQKGFDKCV---VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
A ++F EMQQ DKCV V Y+S+V + G+ A + +M GC P+V Y
Sbjct: 336 ETALRIFNEMQQ---DKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTY 392
Query: 274 NSLMDMHGRA 283
+L+ + R
Sbjct: 393 TALISAYERG 402
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 109/245 (44%), Gaps = 3/245 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y M++ + + Y +++ + K+G E+ + + K + Y L
Sbjct: 199 LDIYNSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHVL---DVMKHEGVEPVLRTYNTL 255
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ + E L ++ + G + + Y +LI ++ ++ A E+++E + M
Sbjct: 256 IIACNMCNQPREALAVYQRLLSDGFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNM 315
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
R + + L+ + G E L + M+ + + +V ++ + A +
Sbjct: 316 DRSVITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAE 375
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+EQ+ + GC P VTY ++I+AY R G + KA + F +M +G + Y++++
Sbjct: 376 VFEQMNAHGCTPDVVTYTALISAYERGGQWQKALQAFHKMCVQGCKPDAIVYNAIIDTLW 435
Query: 247 KTGRI 251
+TG I
Sbjct: 436 ETGII 440
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A ++ EM+ + ++ V Y++++ + K G++ A+ + M+ C PNV YN+L+
Sbjct: 162 RALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIYNSMRAVNCMPNVVTYNTLV 221
Query: 278 DMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
D++G+ + L Y T+I A NM + + Y +G
Sbjct: 222 DVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGFT 281
Query: 322 IDRAMAGIMVGVFSKLSQI 340
+ ++ + K +Q+
Sbjct: 282 PNSTTYNALISAYGKTTQL 300
>gi|356506793|ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Glycine max]
Length = 461
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 133/311 (42%), Gaps = 16/311 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +++M GI D+ + +M +++G ++ +F E R ++ P++ Y I+
Sbjct: 103 LDLFDEMLKRGINPDAWSHNILMNCLFQLGKPDEANRVFKEIVLRD-EVHPAT---YNIM 158
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L K+G L FR+++ G + Y +LI +K A + KE E G
Sbjct: 159 INGLCKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVLKEFGETGN 218
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + ++ + E+ LE++ M++ C ++ K A +
Sbjct: 219 EPNAVTYTTVMTCCFRCRLFEEGLEILSEMRSLGFTFDGFAYCTVIAAMIKTGRMQEAEE 278
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ E ++S G P V+Y ++IN YCR G A ++ E++ +G + ++ +V
Sbjct: 279 IVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLLDEIEGEGLECDQYTHTIIVDGLC 338
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----LRQLE--------KYTT 294
K G A R + M G N+ +N +D G+A + LR E YT
Sbjct: 339 KAGNFDGAQRHLNYMNSLGFGSNLVAFNCFLDGLGKAGHIDHALRLFEVMEVKDSFTYTI 398
Query: 295 VISAYNMAREF 305
V+ AR F
Sbjct: 399 VVHNLCRARRF 409
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
I G +P VTY ++I+AYCR A V M G VV+++++++ +
Sbjct: 40 IRLGVLPDVVTYNTLIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISGAVRKSLF 99
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ L +M +G P+ W +N LM+
Sbjct: 100 SKSLDLFDEMLKRGINPDAWSHNILMN 126
>gi|15219388|ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
DEFECTIVE 2217; Flags: Precursor
gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis thaliana]
gi|332198129|gb|AEE36250.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 836
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 142/300 (47%), Gaps = 22/300 (7%)
Query: 42 AALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAF-EILKFFRDM-KEKGILEDPS--V 97
AAL L ++K S Y +L D L + GR F I F +M ++ D S
Sbjct: 187 AALSLFRWAKKQPWYLPSDECYVVLFDGLNQ-GRDFVGIQSLFEEMVQDSSSHGDLSFNA 245
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y +I A +++VA FK+A+E G D + + L+++++ +G+ K E+ ESM+
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ + +I+ +K AA K+++Q+ + P ++S++++ + G
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ KV++EMQ G + S++ Y K G++ A+RL +MK G PN +Y ++
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425
Query: 278 DMHGRAKNL-------RQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
+ H ++ L + +EK Y+ ++ + + + D +K YN N G+
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM-TNAGL 484
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++K + +G +D+ Y +M F G K ++ E + L ST Y+++ S
Sbjct: 266 FKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY-ESMEKTDSLLDGST--YELIIPS 322
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR K F+ MKE+ + SV++SL+ S + + +++ E + G
Sbjct: 323 LAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPS 382
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+F+ L+ Y + G ++ L + + MK + + + +I+ +K A+ V++
Sbjct: 383 ATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G +P TY+ ++ + G A K++ M G + +Y S++ +
Sbjct: 443 DMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKR 502
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ A +++ +MK G +V + LM
Sbjct: 503 LVDVAGKILLEMKAMGYSVDVCASDVLM 530
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 112/258 (43%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
CY + + + D + +LF E S + Y + L K+ + F
Sbjct: 207 CYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCF 266
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+ +E G D Y +L+ F + A E+++ E+ L D + ++ +
Sbjct: 267 KKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKS 326
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G ++ ++ + MK +L S + +V+ K ++KVY ++ G P +
Sbjct: 327 GRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMF 386
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
S+I++Y + G A +++ EM++ GF Y+ ++ + K+G++ AM + M+
Sbjct: 387 VSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEK 446
Query: 264 KGCEPNVWIYNSLMDMHG 281
G P Y+ L++MH
Sbjct: 447 AGFLPTPSTYSCLLEMHA 464
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 6/209 (2%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L +++MK +G + G Y I+E+ K G E +F + E TPS+ Y
Sbjct: 401 TALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPST---YS 457
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L + SG+ +K + M G+ S Y SL+ A+ V VA ++ E K
Sbjct: 458 CLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKIL--LEMK 515
Query: 125 GMLRDLEVFLKLVLM-YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
M ++V VLM YI++ V+ L+ + M ++ + ++ I + K Y +
Sbjct: 516 AMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDS 575
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCR 212
A + E L+ V Y SI+ R
Sbjct: 576 ARPLLETLVHSAGKVDLVLYTSILAHLVR 604
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 131/283 (46%), Gaps = 6/283 (2%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+YE++ S+G Y +++ F K + L E +R +T + Y +
Sbjct: 157 QFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAP---YNCII 213
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D+L K G+ E FF M++ G+ + LI V A+E+F E G
Sbjct: 214 DTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGS 273
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVK 186
+ + L+ + + G V++ + E M N +D +SC +++NG K + A +
Sbjct: 274 PSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPND-VSCNILINGLCKAKRLSQARE 332
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+E+++ + P VTY++ ++ CR +A +V + KG VV Y+++++
Sbjct: 333 VFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLC 392
Query: 247 KTGRIRDAMRLV-AKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
GR+ +A ++ M+ GC PN + N L++ G A L +
Sbjct: 393 SLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDE 435
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 126/301 (41%), Gaps = 18/301 (5%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+T Y IL ++ K+ R E ++ F +MK G S Y +LI + + A++ +
Sbjct: 100 NTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFY 159
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV-ESMKNAELNISDCISCVIVNGFSK 177
+ G + LV + + V + +E++ E + + S +C+I F K
Sbjct: 160 ERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKK 219
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ + A + + ++ G P +VT+ +I+ C+ ++A+++F + G VV
Sbjct: 220 GKIHEAEL-FFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVI 278
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------ 291
S ++ + K G + +A R+ M +GC PN N L++ +AK L Q +
Sbjct: 279 CSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVV 338
Query: 292 ----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
Y+T + A D + GG D M ++ L +++
Sbjct: 339 KRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLD 398
Query: 342 E 342
E
Sbjct: 399 E 399
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 93/214 (43%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+L L K+GRA E LK + M ++ L + + I S + AE F+E ++
Sbjct: 36 LLVRELSKAGRAEECLKVVKLMLDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDF 95
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
L + + L+ + + +++ +++ MK S ++ G + A
Sbjct: 96 RGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEA 155
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ YE+L+S G +TY +++ +C+ +A ++ E+ +G Y+ ++
Sbjct: 156 QQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDT 215
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G+I +A +M+ G P + L+D
Sbjct: 216 LFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLID 249
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y E S +V+ C C +M+ F K G ++ +F +R TP+ IL +
Sbjct: 267 YLESGGSPSVVI---CSC-LMDGFCKYGGVDEAWRIFELMTNRGC--TPNDVSC-NILIN 319
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K+ R + + F ++ ++ D Y++ + V A ++ +KG
Sbjct: 320 GLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTP 379
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVE-SMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ ++ L+ G +++ +V E M+ A ++ V+VNGF A ++
Sbjct: 380 DVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEAREL 439
Query: 188 YEQLISQGCIPGQVTYASIIN 208
+++ + +G P T++++ N
Sbjct: 440 FQRFVERGVQPDCRTFSAMAN 460
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 125/277 (45%), Gaps = 16/277 (5%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ L G++G E+ F++MK G + + + +LI S++ A ++K
Sbjct: 177 WNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRML 236
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E G+ DL + ++ G+ +++ +V+ MK+ ++ C +++ ++ +
Sbjct: 237 EAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIE 296
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ E++ S P V +++ + L + E+ F+E++Q+GF + ++MV
Sbjct: 297 RMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMV 356
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------- 291
++YG+ + A ++ MK G P++ YNSLM M+ R+ N + E+
Sbjct: 357 SIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIR 416
Query: 292 -----YTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
Y TVI AY + +E R +G D
Sbjct: 417 PDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPD 453
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 137/301 (45%), Gaps = 23/301 (7%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSST-HMYKI 65
Y++M AG+ D Y ++ A + G SEKV A + + +LT S H Y
Sbjct: 232 YKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYA- 290
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV-AEELFKEAEEK 124
+G+ E + + GI+E +V + S ++ + E F E ++
Sbjct: 291 -------NGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQR 343
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G D+ +V +Y MV K E+++ MK S ++ +S+ + +
Sbjct: 344 GFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERS 403
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ +++++G P ++Y ++I AYCR G A +V EM++ G ++ Y++ +A
Sbjct: 404 EEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIAS 463
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR----------AKNLRQLEKYTT 294
Y +A+ +V M GC+PN YNS++D + + NLR+L+ + +
Sbjct: 464 YAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKLDPHIS 523
Query: 295 V 295
+
Sbjct: 524 M 524
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 106/212 (50%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
+ L+ M EKGI D Y +L+ F + K A ++F+E +G ++ F L+
Sbjct: 87 DALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALI 146
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
M+ G + ++V E +K + + +++ F + V++++ G +
Sbjct: 147 KMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFV 206
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P + T+ ++I++Y R G + +A V+ M + G + + +Y++++A + G + + ++
Sbjct: 207 PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKV 266
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+A+MK C+PN Y SL+ + K + ++
Sbjct: 267 LAEMKDGRCKPNELTYCSLLHAYANGKEIERM 298
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 88/178 (49%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A EL + EKG+ D+ + L+ + + G + +++ E M+N + C ++
Sbjct: 88 ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 147
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
R + +KV+E + + C P VT+ ++++ + + G+ S+ VF EM++ GF
Sbjct: 148 MHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVP 207
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
++++++ Y + G AM + +M G P++ YN+++ R +Q EK
Sbjct: 208 ERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEK 265
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+M +KG V Y+++++ + K G+ + A+++ +M+ +GC+PN+ +N+L+ MHG
Sbjct: 94 QMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRG 153
Query: 285 NLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGI 329
++ K I + + + + F NG +D ++G+
Sbjct: 154 KFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNG--MDSEVSGV 196
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+KM+ +G V Y ++ + K G + L + S+ ++ + Y +L D L
Sbjct: 192 KKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACT---YNMLVDDL 248
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+ R+ + + M+++ I + Y S+I F ++ A +F+E +L +
Sbjct: 249 CKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNC 308
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + +G E+ L ++E M+ ++ ++NG + + + + E+
Sbjct: 309 VTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILER 368
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G I G + Y ++I+ CR GL +++ K+ +M + G VV +S ++ + + G+
Sbjct: 369 MRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGK 428
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM 277
I++ ++ KM G PN IY +L+
Sbjct: 429 IKNVKEIICKMYKAGLAPNSIIYTTLI 455
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 124/284 (43%), Gaps = 2/284 (0%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
S++ L++ E M+ G+ D I+ + ++G K +F S + ++PS
Sbjct: 675 SKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWS-GITISPSLA-T 732
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL K + + M GI D SLI F A + V +L K+
Sbjct: 733 YNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKML 792
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D F L++ Y E V K ++V M ++ I++ S+
Sbjct: 793 LDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQ 852
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ + +++ +GCIP + Y +++N CR+G A K+ EM+ G VA S++V
Sbjct: 853 ESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALV 912
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
K G++ +A ++ M K P + + +LM M R ++L
Sbjct: 913 RGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESL 956
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 105/225 (46%), Gaps = 8/225 (3%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S + +L L K + + FF++M + + D S + LI ++K A L
Sbjct: 131 PSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYL 190
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
K+ EE G + + + ++ Y ++G + LE+++ M + + C ++V+ K
Sbjct: 191 LKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCK 250
Query: 178 R----RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+ Y K+ +++IS P ++TY SIIN + + G A ++F EM
Sbjct: 251 NNRSAKGYLLLKKMRKRMIS----PNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLP 306
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y++++ + G A+ ++ M+ G +PN Y++L++
Sbjct: 307 NCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLN 351
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 2/216 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D L ++G E +K M + G++ D ++ LI F + ++K +E+ +
Sbjct: 381 YTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMY 440
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAY 181
+ G+ + ++ L+ Y + G V + +V +M + ++C C V+V+ K
Sbjct: 441 KAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYD-ANCFICNVLVSSLCKDGKV 499
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + + G +P +T+ IIN Y G KA +F EM + G Y +
Sbjct: 500 GVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGL 559
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ + G+ ++A RL+ K+ + YN+++
Sbjct: 560 LKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTIL 595
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
VF L+ +Y+ EGMV LE M N S +++ K R A +++
Sbjct: 99 SVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKE 158
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++++ P T+ +IN C G KA + +M++ G+ VV Y++++ Y K GR
Sbjct: 159 MLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGR 218
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+ A+ L+ +M KG E + YN L+D KN R + Y
Sbjct: 219 YKAALELIDQMGSKGIEADACTYNMLVD--DLCKNNRSAKGY 258
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 105/263 (39%), Gaps = 38/263 (14%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+KM G+V D + ++ F ++G + V + C+ K L P+S +Y L +
Sbjct: 402 DKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEII--CKMYKAGLAPNSI-IYTTLIYNY 458
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+G E K + M G + + L+ S +V VAE F + G + +
Sbjct: 459 CKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNS 518
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F DCI +NG+ A ++++
Sbjct: 519 ITF-------------------------------DCI----INGYGNSGNGLKAFSMFDE 543
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I G P TY ++ A CR G + +A+++ ++ V Y++++ K+G
Sbjct: 544 MIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGM 603
Query: 251 IRDAMRLVAKMKPKGCEPNVWIY 273
+ DA+ L +M + P+ + Y
Sbjct: 604 LTDAVALFDEMVQRNVLPDSYTY 626
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 95/205 (46%), Gaps = 3/205 (1%)
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+AF+++ M I D + + S+I + ++ V+ + L E E+G + D +
Sbjct: 817 GKAFDLVNI---MNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQY 873
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
+ LV G + ++ + M+ ++ D +V G +K A V + ++
Sbjct: 874 IALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLR 933
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+ IP T+ ++++ +CR +A K+ M V+AY+ +++ G +
Sbjct: 934 KSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVAS 993
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLMD 278
A++L ++K +G PN+ Y L+D
Sbjct: 994 ALKLYKEIKQRGLWPNMTTYCILID 1018
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + + + G K +M+ GI ++L+ A +V+ A+ +
Sbjct: 873 YIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFML 932
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
K ++ + F L+ M+ + + L++ ++M ++ + V+++G
Sbjct: 933 RKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVA 992
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINA-YCRIGLYSKAEKVFIEMQQKG 230
+A+K+Y+++ +G P TY +I+A + +K E + ++Q++G
Sbjct: 993 SALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQERG 1041
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 54/282 (19%), Positives = 118/282 (41%), Gaps = 42/282 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAAL-FLECESRKLDLTPSSTHMYKILCD 68
+++M ++ DS Y I + G + VAAL F K ++P MY D
Sbjct: 611 FDEMVQRNVLPDSYTYAIIFAGLIRRG--KMVAALHFYGNLLGKGAVSPEKV-MYTTFVD 667
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L ++G++ L F DM++ G+ D ++ ++ + ++ A ++F
Sbjct: 668 GLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFT--------- 718
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
M+ + + S+ A NI +++G++K++ +Y
Sbjct: 719 ----------------MMWSGITISPSL--ATYNI-------LLHGYAKKKNLSKCSNLY 753
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYG 246
++ G P ++T S+I +C+ + K+ +M G D+C ++ ++ Y
Sbjct: 754 NIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQC--TFNMLIMKYC 811
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+T + A LV M P++ ++S++ + R +++
Sbjct: 812 ETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQE 853
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 128/283 (45%), Gaps = 9/283 (3%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF---LECESRKLDLTPSSTHMYKILCD 68
+M S G+ ++ Y I++A YK G K +EC + +T Y L
Sbjct: 280 EMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVT------YNTLIS 333
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ G+ E + KG++ + Y LI ++ A E E+G
Sbjct: 334 GSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKP 393
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
DL + LV + G V+ L + E M + I ++++G K+ AA +
Sbjct: 394 DLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLL 453
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ Q +P YA++++ + R G +A K+F +KG + +V Y++M+ Y K
Sbjct: 454 AEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKF 513
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
G ++DAM + +MK + P+ + Y++++D + + +L +K
Sbjct: 514 GMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQK 556
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 28/230 (12%)
Query: 80 LKFFRDMKEKGILEDPS---VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
LKFF D +G P Y+SL+ A E + + + M E +
Sbjct: 77 LKFF-DWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIV 135
Query: 137 VLMYIEEGMVEKTLEV----------------VESMKN-----AELNISDCISCVIVNGF 175
+ Y + G+VEK LE+ S+ N + I+ +C++V G
Sbjct: 136 IQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGL 195
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K K+ E QGCIP + Y ++I+ YC+ G A +FIE++ KGF V
Sbjct: 196 CKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTV 255
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGR 282
Y +++ + K G + RL+ +M +G NV +YN+++D HG
Sbjct: 256 ETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGH 305
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 2/217 (0%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
I+ L K G+ E K D +G + + Y +LI + ++++A LF E + K
Sbjct: 190 IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK 249
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G L +E + ++ + ++G + ++ M + L ++ + I++ K A
Sbjct: 250 GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 309
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V+ E +I GC P VTY ++I+ CR G S+A+++ + KG +Y+ ++
Sbjct: 310 VETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHA 369
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
Y K G A + +M +G +P++ Y +L +HG
Sbjct: 370 YCKQGGYDRASNWLIEMTERGHKPDLVTYGAL--VHG 404
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y IL L K + +M ++ +L D VYA+L+ F + A +LF+
Sbjct: 432 IYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 491
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
EKGM + + ++ Y + GM++ + + MK L + +++G+ K+
Sbjct: 492 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 551
Query: 182 WAAVKVYEQLISQGCIP 198
A K++ +++ C P
Sbjct: 552 DGAQKMFREMVKMKCKP 568
>gi|297839813|ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
Length = 832
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 142/300 (47%), Gaps = 22/300 (7%)
Query: 42 AALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAF-EILKFFRDM-KEKGILEDPS--V 97
AAL L ++K S Y +L D L + GR F I F +M ++ D S
Sbjct: 183 AALSLFRWAKKQPWYLPSDECYVVLFDGLNQ-GRDFVGIQSLFEEMVQDSSSHGDLSFGA 241
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y +I A +++VA FK+A+E G D + + L+++++ +G+ K E+ ESM+
Sbjct: 242 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 301
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ + +I+ +K AA K+++Q+ + P ++S++++ + G
Sbjct: 302 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 361
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ KV++EMQ G + S++ Y K G++ A+RL +MK G PN +Y ++
Sbjct: 362 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 421
Query: 278 DMHGRAKNL-------RQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
+ H ++ L + +EK Y+ ++ + + + D +K YN N G+
Sbjct: 422 ESHAKSGKLEVAMSVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM-TNAGL 480
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++K + +G +D+ Y +M F G K ++ E + L ST Y+++ S
Sbjct: 262 FKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY-ESMEKTDSLLDGST--YELIIPS 318
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L KSGR K F+ MKE+ + SV++SL+ S + + +++ E + G
Sbjct: 319 LAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPS 378
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+F+ L+ Y + G ++ L + + MK + + + +I+ +K A+ V++
Sbjct: 379 ATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMSVFK 438
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+ G +P TY+ ++ + G A K++ M G + +Y S++ +
Sbjct: 439 DMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKR 498
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ A +++ +MK G +V + LM
Sbjct: 499 LVDVAGKILLEMKAMGYSVDVCASDVLM 526
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L +++MK +G + G Y I+E+ K G E ++F + E TPS+ Y
Sbjct: 397 TALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMSVFKDMEKAGFLPTPST---YS 453
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L + SG+ +K + M G+ S Y SL+ A+ V VA ++ E K
Sbjct: 454 CLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKIL--LEMK 511
Query: 125 GMLRDLEVFLKLVLM-YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
M ++V VLM YI++ V+ L+ + M ++ + ++ I + K Y +
Sbjct: 512 AMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDS 571
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCR 212
A + E L+ V Y SI+ R
Sbjct: 572 ARPLLETLVHSAGKVDLVLYTSILAHLVR 600
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 7/280 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E M+S GI + Y +++ K G EK AL L E + ++ PS Y L D L
Sbjct: 347 EDMRSHGISPTAYSYSILIDGLCKKGQVEK--ALDLIEEMVQSNVKPSLV-TYSSLFDGL 403
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
KSG L F ++ +G D Y +LI F ++ A +L E G + +
Sbjct: 404 CKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNS 463
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
F +L+ + + ++K LEV M +LNI C ++ + F++ +W A+K+
Sbjct: 464 FTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTC--NIMADEFNREGHFWEALKLI 521
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ G +P TY +I C+ KA +V M + C + Y++++ Y K
Sbjct: 522 NEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQ 581
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
A+ L AKM G P++ Y L++M +++
Sbjct: 582 SNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQE 621
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 3/267 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M+ G V +S + +++ F K +K +F + L + + I+ D
Sbjct: 452 HEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCN---IMADEF 508
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G +E LK ++++ GI+ + Y +I + + A E+ + +
Sbjct: 509 NREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCA 568
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ Y ++ K L + M + S +++N FS R A ++++
Sbjct: 569 IHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKE 628
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I +G +P ++ + II +C++G A ++ EM Q G VV Y+ ++ Y K R
Sbjct: 629 MIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKR 688
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ A L KMK P+ Y +L+
Sbjct: 689 MDKADFLFNKMKRDNVTPDGLTYTALI 715
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 142/316 (44%), Gaps = 28/316 (8%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPS-STHMYKILCDSL--GKSGRAFEILK--- 81
++ F + +E + +LF E + D PS + Y I+ + G G+ +I+K
Sbjct: 219 LLNCFAEANQTEFIRSLFEELK----DSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATE 274
Query: 82 FFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+M+ G E P+V Y + I V+ A L ++ + + + ++
Sbjct: 275 VLEEMEMNG--ESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHE 332
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G + + E++E M++ ++ + ++++G K+ A+ + E+++ P
Sbjct: 333 FCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPS 392
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
VTY+S+ + C+ GL + +F + +G+ V++Y++++ + + A +LV
Sbjct: 393 LVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVH 452
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLR---QLEKYT---------TVISAYNMAREFDM 307
+M+ G PN + +N L +HG K R LE +T + + MA EF+
Sbjct: 453 EMRMNGSVPNSFTFNRL--IHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNR 510
Query: 308 CVKFYNEFRMNGGVID 323
F+ ++ V D
Sbjct: 511 EGHFWEALKLINEVQD 526
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 114/278 (41%), Gaps = 50/278 (17%)
Query: 8 HYYEKMK------SAGIVLDSGCYCQIMEAFYKIGDSEK---VAALFLECESRKLDLTPS 58
H++E +K GIV +S Y +++ K +EK V + L K ++ P
Sbjct: 513 HFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVML-----KNNVFPC 567
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ H Y L D K + L + M + GI Y LI F++ ++++ A LF
Sbjct: 568 AIH-YNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLF 626
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
KE +KG++ D +F +C+I GF K
Sbjct: 627 KEMIKKGLVPDEIIF----------------------------------TCIIA-GFCKV 651
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+A +YE++ G P VTY +I+ Y +I KA+ +F +M++ + Y
Sbjct: 652 GDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTY 711
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
++++ Y G + +MK G PN Y +L
Sbjct: 712 TALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 25/242 (10%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCI--SCV 170
A +L E ++ G++ + + ++ +E EK EV+ M KN N+ C
Sbjct: 517 ALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKN---NVFPCAIHYNT 573
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+++G++K+ A+ +Y +++ G P VTY +IN + +A +F EM +KG
Sbjct: 574 LIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKG 633
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ ++ ++A + K G ++ A L +M G PNV Y L+D + + K + + +
Sbjct: 634 LVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKAD 693
Query: 291 ----------------KYTTVISAYNMAREFDMCVKFYNEFRMNG---GVIDRAMAGIMV 331
YT +I Y D + +NE + NG A G+ +
Sbjct: 694 FLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATLGLHL 753
Query: 332 GV 333
GV
Sbjct: 754 GV 755
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 128/310 (41%), Gaps = 35/310 (11%)
Query: 42 AALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASL 101
A +F++ L+L S + L + ++ + I F ++K+ G P+V+
Sbjct: 198 ADVFVQARRFGLELNILSCNF---LLNCFAEANQTEFIRSLFEELKDSG--PSPNVFTYT 252
Query: 102 IC-------SFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
I SF ++ A E+ +E E G + + + G VE L ++
Sbjct: 253 IMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIR 312
Query: 155 SMK--NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
++ N LN S C + VI + F + A ++ E + S G P +Y+ +I+ C+
Sbjct: 313 DLRIRNQPLN-SYCYNAVI-HEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCK 370
Query: 213 IGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
G KA + EM Q +V YSS+ K+G ++ + + +G + +V
Sbjct: 371 KGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVIS 430
Query: 273 YNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
YN T+I+ + + R+ K +E RMNG V + ++
Sbjct: 431 YN-------------------TLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIH 471
Query: 333 VFSKLSQIEE 342
F K ++++
Sbjct: 472 GFCKRQRLDK 481
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE--- 115
S + +KI+ L +G E+ F RD I S+ + V+E
Sbjct: 120 SIYAFKIIIHVLASAGLQMEVQIFLRD----------------IISYYKEVNLDVSELFS 163
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK--NAELNISDCISCVIVN 173
L ++ M + V L+ ++ E M+ +V + ELNI C ++N
Sbjct: 164 TLLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSC--NFLLN 221
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS------KAEKVFIEMQ 227
F++ ++E+L G P TY ++N YC+ G + KA +V EM+
Sbjct: 222 CFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCK-GSFGKNIDIVKATEVLEEME 280
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
G VV Y + + + G + A+RL+ ++ + N + YN+++ R L
Sbjct: 281 MNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELH 340
Query: 288 Q 288
+
Sbjct: 341 E 341
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 3/135 (2%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + +++M G+V D + I+ F K+GD + AL+ E + +P+ Y
Sbjct: 620 QEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMS--QWGKSPNVV-TY 676
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L D K R + F MK + D Y +LI + S+ E+F E +E
Sbjct: 677 TCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKE 736
Query: 124 KGMLRDLEVFLKLVL 138
G+ + + L L
Sbjct: 737 NGVFPNYTAYATLGL 751
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 131/272 (48%), Gaps = 9/272 (3%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM+ I LD+ Y I++ K G + LF E E + + ++ Y IL
Sbjct: 351 KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI---TTNIITYNILIGGFC 407
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+GR + K RDM ++ I + ++ LI SF +++ AEEL KE +G+ D
Sbjct: 408 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 467
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + +E ++K ++V+ M K + NI +++NG+ K ++++
Sbjct: 468 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR--TFNILINGYCKANRIDDGLELFR 525
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +G + VTY ++I +C +G + A+++F EM + +V Y ++ G
Sbjct: 526 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 585
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
A+ + K++ E ++ IYN + +HG
Sbjct: 586 ESEKALEIFEKIEKSKMELDIGIYNII--IHG 615
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 122/253 (48%), Gaps = 3/253 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M GI D+ Y +++ F K +K + S+ D + + IL +
Sbjct: 454 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD---PNIRTFNILING 510
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+ R + L+ FR M +G++ D Y +LI F + ++ VA+ELF+E + + +
Sbjct: 511 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 570
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G EK LE+ E ++ +++ + I +I++G A ++
Sbjct: 571 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 630
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L +G PG TY +I C+ G S+AE +F +M++ G Y+ ++ + G
Sbjct: 631 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 690
Query: 250 RIRDAMRLVAKMK 262
+++L+ ++K
Sbjct: 691 DATKSVKLIEELK 703
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + + KSG+ ++ R M+E+ I D Y+ +I + A LF E E
Sbjct: 329 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 388
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ ++ + L+ + G + +++ M ++N + V+++ F K
Sbjct: 389 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 448
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++++I +G P +TY S+I+ +C+ KA ++ M KG D + ++ ++
Sbjct: 449 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 508
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y K RI D + L KM +G + YN+L+
Sbjct: 509 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 543
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/276 (19%), Positives = 115/276 (41%), Gaps = 19/276 (6%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + L SG+ E + M E G + Y ++ + +A EL ++ EE+
Sbjct: 297 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 356
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D + ++ + G ++ + M+ + + +++ GF +
Sbjct: 357 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 416
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K+ +I + P VT++ +I+++ + G +AE++ EM +G + Y+S++ +
Sbjct: 417 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 476
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREF 305
K + A ++V M KGC+PN+ +N L I+ Y A
Sbjct: 477 CKENHLDKANQMVDLMVSKGCDPNIRTFNIL-------------------INGYCKANRI 517
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
D ++ + + + G V D ++ F +L ++
Sbjct: 518 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 553
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N F + R A ++I G P +T++++IN C G S+A ++ M +
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN---- 285
G ++ +++V +G+ +AM L+ KM GC+PN Y ++++ ++
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345
Query: 286 ---LRQLE---------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
LR++E KY+ +I D +NE M G + I++G
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405
Query: 334 FSKLSQIEE 342
F + ++
Sbjct: 406 FCNAGRWDD 414
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 38/225 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + KM G+V D+ Y +++ F ++G LF E SRK+ P + YKIL
Sbjct: 521 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV---PPNIVTYKIL 577
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L +G + + L+ F +++ + D +Y +I + ++V A +LF KG+
Sbjct: 578 LDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 637
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + +++ G K+ A
Sbjct: 638 KPGVKTY-----------------------------------NIMIGGLCKKGPLSEAEL 662
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ ++ G P TY +I A+ G +K+ K+ E+++ GF
Sbjct: 663 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 707
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 123/257 (47%), Gaps = 5/257 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D L K+GR E K F M ++G+ + + Y +L+ +A+ + L
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ + VF L+ Y ++G V++ + V M+ LN ++ K
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ +EQ+I + PG + Y S+I++ C + KA+++ +EM +G + ++S++
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+ K GR+ ++ +L M G +P++ Y++L+D + A + + K + + M
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 303 REFDMCVKFYNEFRMNG 319
+ CV YN +NG
Sbjct: 547 PD---CVT-YNTL-ING 558
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 5/277 (1%)
Query: 3 SQSKLHYYEKMKSAG--IVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
SQ L + M G D Y ++ F+K GD +K + E R + P+
Sbjct: 178 SQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGI--LPNVV 235
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y + +L K+ + ++ M + G++ + Y S++ + S + K A K+
Sbjct: 236 -TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
G+ D+ + L+ + G + ++ +SM L ++ G++ + A
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ + ++ G P ++ +I AY + G +A VF +M+Q+G + V Y +
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ + K+GR+ DAMR +M + P +YNSL+
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVI-----VNGFSKRRAYWAAVKVYEQLISQGC 196
+E ++ LE+++ M + + DC V+ +NGF K A Y +++ +G
Sbjct: 174 DENRSQEALELLQMMPD---DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGI 230
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
+P VTY+SII A C+ KA +V M + G Y+S+V Y +G+ ++A+
Sbjct: 231 LPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIG 290
Query: 257 LVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
+ KM G EP+V YNSLMD +GR R++
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 5/255 (1%)
Query: 31 AFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKG 90
A+ K G ++ +F + R+ L P T Y + L KSGR + +++F M ++
Sbjct: 383 AYAKQGKVDQAMLVF--SKMRQQGLNPD-TVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 91 ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
+ VY SLI S + A+EL E ++G+ D F ++ + +EG V ++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
++ + M + +++G+ A K+ ++S G P VTY ++IN Y
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
C+I A +F EM+ G ++ Y+ ++ +T R A L + G + +
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619
Query: 271 WIYNSLMDMHGRAKN 285
YN + +HG KN
Sbjct: 620 STYNII--LHGLCKN 632
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 4/274 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + Y+E+M + + Y ++ + +K L LE R + L T +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL---DTIFF 482
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ DS K GR E K F M G+ D Y++LI + ++ A +L
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
GM D + L+ Y + +E L + M+++ ++ +I+ G + R A
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++Y + G TY I++ C+ L +A ++F + ++ M+
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K GR +A L A + G P+V Y SLM
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTY-SLM 695
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 138/331 (41%), Gaps = 19/331 (5%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+M GI LD+ + I+++ K G +SEK+ L + ++ + P Y L D
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV-----RIGVKPDII-TYSTLID 522
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+G+ E K M G+ D Y +LI + I+ ++ A LF+E E G+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 129 DLEVFLKLV--LMYIEEGMVEKTLEV--VESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D+ + ++ L K L V ES EL+ + +I++G K A
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN----IILHGLCKNNLTDEA 638
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++++ L T+ +I A ++G +A+ +F + G V YS M
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAEN 698
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
+ G + + L M+ GC N + NS++ + ++ + Y +I + + E
Sbjct: 699 LIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLE 758
Query: 305 FDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
F + ++GG + I G+FS
Sbjct: 759 ASTASLFLD--LLSGGKYQEYHSCIRGGIFS 787
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 31/188 (16%)
Query: 178 RRAYWAAVKVYEQLISQGC---IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
R + AAV Y ++ G P TY +I + C G + +KGF
Sbjct: 66 RHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVD 125
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLV-AKMKPKGCEPNVWIYNSLM----DMHGRAKNLRQL 289
+A++ ++ R DAM +V +M GC PNV+ YN L+ D + + L L
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185
Query: 290 E--------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+ YTTVI+ + + D Y+E ++DR GI+ V +
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE------MLDR---GILPNVVT 236
Query: 336 KLSQIEEL 343
S I L
Sbjct: 237 YSSIIAAL 244
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 141/302 (46%), Gaps = 17/302 (5%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R+ L+P + Y L GK G L + + M++ + D +Y++LI + +
Sbjct: 1 RERALSPDR-YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 59
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
A +F + G DL + ++ ++ + + + ++ M+ A + +
Sbjct: 60 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYST 119
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ + + R + A+ V+ ++ C+ T +I+ Y ++G+ +A+K+F M++ G
Sbjct: 120 LLTMYVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 179
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------RAK 284
+ VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G +A
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239
Query: 285 NL------RQLEK----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
NL R +E Y+T+IS + + D + + R +G ID+ + M+ +
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 335 SK 336
+
Sbjct: 300 ER 301
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L + +KM+ + D Y ++E K+ D K ++F ++ TP Y
Sbjct: 27 AALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF--SRLKRSGFTPDLV-AYN 83
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ + GK+ E +M+ G+ + + Y++L+ + + A +F E E
Sbjct: 84 AMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENRKFLEALSVFAEMREI 143
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
L DL ++ +Y + GM ++ ++ M+ + + ++ + + A
Sbjct: 144 KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEA 203
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ + + VTY S++ Y + + KA + EMQ +G + + YS+++++
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISI 263
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+GK G++ A L K++ G + + +Y +++ + RA
Sbjct: 264 WGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERA 302
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 150/333 (45%), Gaps = 30/333 (9%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK--LDLTPSSTHMYKILCDS 69
+M++AG+ ++ Y ++ + + + ++F E K LDLT + I+ D
Sbjct: 104 EMRTAGVTPNTASYSTLLTMYVENRKFLEALSVFAEMREIKCLLDLTTCN-----IMIDV 158
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ G A E K F M++ GI + Y +L+ + A LF+ + K + ++
Sbjct: 159 YGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++++Y + EK +++ M+N + + I++ + K A +++
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L S G QV Y ++I AY R GL + A+++ E+++ +A + + G
Sbjct: 279 KLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIA----IHILAGAG 334
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
RI +A W++ +D G K++ E+ + S Y +++ V
Sbjct: 335 RIEEA---------------TWVFRQAIDA-GEVKDIXVFERMIHLFSKY---KKYGNVV 375
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +++ R G D + +++ + KL + ++
Sbjct: 376 EVFDKMRGLGYFPDSNVIALILNAYGKLHEFDK 408
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+H + M+ I + Y +M + K + EK L E ++R ++ P+S Y +
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE--PNSI-TYSTI 260
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK-G 125
GK G+ F+ ++ G+ D +Y ++I ++ V A+ L E +
Sbjct: 261 ISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ RD+ + + G +E+ V +A + +++ FSK + Y V
Sbjct: 321 IPRDIAIHI-----LAGAGRIEEATWVFRQAIDAGEVKDIXVFERMIHLFSKYKKYGNVV 375
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+V++++ G P A I+NAY ++ + KA V++EMQ+ G
Sbjct: 376 EVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVG 420
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M++ GI +S Y I+ + K+G ++ A LF + S +D+ +Y+ + +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV---LYQTMIVAY 299
Query: 71 GKSGRAFEILKFFRDMKEK-GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++G + ++K I D +++ A ++ A +F++A + G ++D
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIHI-----LAGAGRIEEATWVFRQAIDAGEVKD 354
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ VF +++ ++ + +EV + M+ + +I+N + K + A VY
Sbjct: 355 IXVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYM 414
Query: 190 QLISQGCI 197
++ GC+
Sbjct: 415 EMQEVGCV 422
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
++M+ +GI + Y+++I + + ++ A LF++ G+ D ++ +++ Y
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-RRAYWAAVKVYEQLISQGCIPG 199
G+V ++ +K + NI I+ I+ G + A W V+ Q I G +
Sbjct: 300 ERAGLVAHAKRLLHELKRPD-NIPRDIAIHILAGAGRIEEATW----VFRQAIDAGEVKD 354
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMRL 257
+ +I+ + + Y +VF +M+ G+ D V+A ++ YGK A +
Sbjct: 355 IXVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIAL--ILNAYGKLHEFDKANDV 412
Query: 258 VAKMKPKGC 266
+M+ GC
Sbjct: 413 YMEMQEVGC 421
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 110/223 (49%), Gaps = 7/223 (3%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA----EVKVAEELF 118
Y L ++GR + + FR M + G+ Y ++ ++ ++ EV V L
Sbjct: 188 YTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV---LV 244
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E G+ D + L+ G+ + ++ + MK A +++ + K
Sbjct: 245 DSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKA 304
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
R + A+ V +++ + GC P VTY S+I+AY + GL +A ++ EM+ +G VV Y
Sbjct: 305 RRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTY 364
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+++++ + G+I A+ ++M GC PN+ YN+L+ MHG
Sbjct: 365 TTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHG 407
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 161/354 (45%), Gaps = 24/354 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++MK+AG D + +++ + K E+ + + E+ TPS Y L +
Sbjct: 279 FDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMEN--AGCTPSVV-TYNSLISA 335
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G E L+ ++M+ +G+ D Y +LI I ++ A + E G +
Sbjct: 336 YVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPN 395
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVY 188
L + L+ M+ G + + V + +++A + D ++ ++ F + V+
Sbjct: 396 LCTYNALIKMHGVRGKFTEMMIVFDDLRSAGY-VPDVVTWNTLLAVFGQNGLDSEVSGVF 454
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ G IP + TY S+I++Y R GL+ +A +++ M + G + Y+++++ +
Sbjct: 455 KEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARG 514
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYT--------------- 293
GR A +L A+M+ + C+P+ Y+SL+ + AK L +++ +
Sbjct: 515 GRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLV 574
Query: 294 -TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK---LSQIEEL 343
T++ N K + E R +D + MV ++ K + ++EE+
Sbjct: 575 KTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEV 628
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 134/312 (42%), Gaps = 19/312 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ MK GI LD Y ++ + G + A +F E ++ + P + L D
Sbjct: 245 DSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFE--PDKV-TFNSLLDVY 301
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK+ R E + + M+ G Y SLI ++ ++ A EL +E E +GM D+
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 361
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ G ++ L M + + C ++ R + + V++
Sbjct: 362 VTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDD 421
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L S G +P VT+ +++ + + GL S+ VF EM++ G+ Y S+++ Y + G
Sbjct: 422 LRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 481
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
AM + +M G P++ YN+++ R Q EK Y++
Sbjct: 482 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSS 541
Query: 295 VISAYNMAREFD 306
++ AY A++ D
Sbjct: 542 LLHAYANAKKLD 553
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 6/276 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M AGI D Y ++ A + G + LF E E R D P Y L +
Sbjct: 489 YKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDR--DCKPDELS-YSSLLHA 545
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ + ++ D+ + I + +L+ + + E+ F+E + D
Sbjct: 546 YANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLD 605
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ V +V +Y + MV+K EV+ MK +N S +++ +S+ +
Sbjct: 606 INVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILT 665
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ S G P + +Y ++I AY R G +A ++F EM+ G +V Y+ + Y
Sbjct: 666 EIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANL 725
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGR 282
+A+ LV + +GC+PN YNS+++ HGR
Sbjct: 726 MFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGR 761
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 128/290 (44%), Gaps = 3/290 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M G+ Y ++ + K+ K + ++ S K D + Y L
Sbjct: 208 FRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLVD--SMKEDGIELDRYTYNTLISC 265
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G E + F +MK G D + SL+ + + A + K+ E G
Sbjct: 266 CRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPS 325
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ Y+++G++E+ LE+ + M+ + +++G + AA+ Y
Sbjct: 326 VVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYS 385
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ GC P TY ++I + G +++ VF +++ G+ VV +++++A++G+ G
Sbjct: 386 EMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNG 445
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKYTTVISA 298
+ + +MK G P Y SL+ + R Q +E Y +I A
Sbjct: 446 LDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEA 495
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 150/367 (40%), Gaps = 54/367 (14%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++M+ G+ D Y ++ +IG + AAL E + +P+ Y
Sbjct: 343 EEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKID--AALATYSEMVRNGCSPNLC-TY 399
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L G G+ E++ F D++ G + D + +L+ F +FKE ++
Sbjct: 400 NALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKK 459
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G + + + ++ L+ Y G+ ++ +E+ + M A + +++ ++ +
Sbjct: 460 AGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQ 519
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYC-------------------------------- 211
A K++ ++ + C P +++Y+S+++AY
Sbjct: 520 AEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVL 579
Query: 212 ---RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
++ S+ EK F E++++ + ++MV++YGK ++ ++ MK
Sbjct: 580 VNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINH 639
Query: 269 NVWIYNSLMDMHGRAKNLRQLE----------------KYTTVISAYNMAREFDMCVKFY 312
+ YNSLM M+ R + + E Y TVI AY + + +
Sbjct: 640 SAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLF 699
Query: 313 NEFRMNG 319
+E + +G
Sbjct: 700 SEMKCSG 706
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 74/196 (37%), Gaps = 52/196 (26%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK---------- 247
P Y ++++ + R G + A VF M G +V Y+ ++ +Y K
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 248 --------------------------TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
G R+A ++ +MK G EP+ +NSL+D++G
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302
Query: 282 RAKN-------LRQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
+A+ L+++E Y ++ISAY + ++ E G D
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362
Query: 326 MAGIMVGVFSKLSQIE 341
++ ++ +I+
Sbjct: 363 TYTTLISGLDRIGKID 378
>gi|147841962|emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
Length = 701
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 18/281 (6%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+++F M E G D Y+++I ++ V +A +L+ A + D F L+ +
Sbjct: 231 VEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRI 290
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
Y G + L V E MK + + I +++ + + W A +Y+++ + G
Sbjct: 291 YGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLS 350
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
TYA+++ AY R A V+ EM++KG + VV Y++++AM G +A +
Sbjct: 351 WGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFE 410
Query: 260 KMKPKG-CEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMA 302
MK G C P+ W ++SL+ ++ + + + E T++I Y A
Sbjct: 411 DMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKA 470
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
D V+ ++ D G M+ V ++ S EEL
Sbjct: 471 NRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQ-SPKEEL 510
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L+VF K + E + ++ LE +K + S ISC V+ + W +E
Sbjct: 183 LKVFRKCRNLDXAEKLFDEMLE--RGVKPDNITFSTIISCARVSSLPNKAVEW-----FE 235
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ GC P VTY+++I+AY R G A K++ + + + V +S+++ +YG +G
Sbjct: 236 KMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSG 295
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YT 293
+ + +MK G +PN+ IYN+L+D GRAK Q + Y
Sbjct: 296 NFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYA 355
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++ AY AR + + Y E + G + + ++ + + + EE
Sbjct: 356 ALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEE 404
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 112/287 (39%), Gaps = 66/287 (22%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP--------- 57
+ ++EKM G D Y +++A+ + G+ + L+ + K + P
Sbjct: 231 VEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRI 290
Query: 58 -----------------------SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILED 94
+ +Y L D++G++ R ++ +++M G+
Sbjct: 291 YGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLS 350
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
YA+L+ ++ + A ++KE +EKG+ + ++ L+ M + G E+ + E
Sbjct: 351 WGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFE 410
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MK+ S C+P T++S+I Y G
Sbjct: 411 DMKS----------------------------------SGNCMPDSWTFSSLITIYSCSG 436
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
S+AE + M + GF+ + +S++ YGK R + +R ++
Sbjct: 437 KVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRL 483
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 3/277 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+S + +M G+ + Y ++ + G + AA+ E SRK+ P Y
Sbjct: 240 ESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKM--VPDG-FTY 296
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL D ++G + +L F + +KG+ + L+ ++ AEE+ +
Sbjct: 297 SILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVN 356
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+L+ ++ L+ Y + G +E + + MK+ + ++NG K
Sbjct: 357 SGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITE 416
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A + ++ G P T+ ++I+AY R G K + +MQ+KG VV+Y S+V
Sbjct: 417 AHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVN 476
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ K G+I +A+ ++ M K P +YN+++D +
Sbjct: 477 AFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAY 513
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 41/288 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M +V + Y +++ K GD E + L + + L P+ Y +L
Sbjct: 211 FDEMPEKAVVPNHITYNTMIDGHIKKGDLE--SGFRLWSQMLRHGLKPNVI-TYNVLLSG 267
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++GR E +M + ++ D Y+ L + + + LF+E+ +KG
Sbjct: 268 LCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKG---- 323
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ I +++NG K A +V +
Sbjct: 324 -------------------------------VKIGAYTCSILLNGLCKDGKISKAEEVLQ 352
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L++ G + V Y ++IN YC+IG A +F +M+ + + Y++++ GK
Sbjct: 353 TLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVE 412
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
RI +A LV +M+ G P+V +N+L+D +GRA QLEK ++S
Sbjct: 413 RITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAG---QLEKCFIILS 457
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 126/302 (41%), Gaps = 38/302 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M S +V D Y + + + GDS+ + +LF E + + + + IL + L
Sbjct: 282 DEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKI---GAYTCSILLNGL 338
Query: 71 ---GKSGRAFEILK--------------------------------FFRDMKEKGILEDP 95
GK +A E+L+ F+ MK + I D
Sbjct: 339 CKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDH 398
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
Y +LI + + A +L E E+ G+ +E F L+ Y G +EK ++
Sbjct: 399 ITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSD 458
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
M+ L + IVN F K AV + + + + +PG Y +II+AY G
Sbjct: 459 MQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGS 518
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+A + +M+ G +V Y+ ++ K +I +A L+ ++ G P+V YN+
Sbjct: 519 TDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNT 578
Query: 276 LM 277
L+
Sbjct: 579 LI 580
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 124/273 (45%), Gaps = 3/273 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++MKS I D Y ++ K+ + L +E E ++ S + L D+
Sbjct: 386 FQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVN---PSVETFNTLIDA 442
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G++G+ + DM+EKG+ + Y S++ +F ++ A + + K +L
Sbjct: 443 YGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPG 502
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+V+ ++ YIE G ++ + E MK++ + S +++ G K+ A ++ +
Sbjct: 503 AQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLD 562
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L + G P ++Y ++I+A C +A ++ EM + G Y + + G G
Sbjct: 563 SLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAG 622
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
R+ + L +M K P IYN ++D + +
Sbjct: 623 RVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAK 655
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 92/230 (40%), Gaps = 5/230 (2%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+ G+ + Y I+ AF K G + A+ + + D+ P + +Y + D+ +
Sbjct: 459 MQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIK--DVLPGA-QVYNAIIDAYIE 515
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G + MK G+ Y LI +++ AEEL G+ D+
Sbjct: 516 CGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVIS 575
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+ ++ LE+ + M + S ++ + +Y+Q++
Sbjct: 576 YNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQML 635
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
+ +P Y +++AY + G SK E + EM KG V Y+SM
Sbjct: 636 DKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI--AVGDYTSMT 683
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P +Y +I + G A K+F EM +K + Y++M+ + K G + RL
Sbjct: 186 PNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRL 245
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRA 283
++M G +PNV YN L+ RA
Sbjct: 246 WSQMLRHGLKPNVITYNVLLSGLCRA 271
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ +++ G+ D Y ++ A ++++ AL LE E K + PS Y++L SL
Sbjct: 562 DSLRNYGLAPDVISYNTLISACCYRSNTDR--ALELEKEMWKCGIKPSP-RTYRMLFSSL 618
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
G +GR E+ ++ M +K ++ +Y ++ ++A E E L KE +KG+
Sbjct: 619 GGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 120/255 (47%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y + LG++ + I K M + G + Y +I S+ ++ A +FK+
Sbjct: 380 HTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQ 439
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G D + L+ ++ + G ++ + + E M++A L V++N K
Sbjct: 440 MQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGH 499
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AA +++ +++ +GC+P VTY +I + Y A K++ +MQQ GF+ V Y
Sbjct: 500 LNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCI 559
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
++ + G G + +A + +M+ K P+ +Y L+D+ G++ N+++ ++ +
Sbjct: 560 VMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAG 619
Query: 301 MAREFDMCVKFYNEF 315
+ C + F
Sbjct: 620 LKPNVPTCNSLLSAF 634
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 17/186 (9%)
Query: 174 GFSKRRAYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
G R +AA+ K+ +Q+I GC P VTY II++Y R A VF +MQ+ G +
Sbjct: 387 GLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCE 446
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR----- 287
V Y +++ ++ K+G + AM + KM+ G P+ + Y+ +++ G+A +L
Sbjct: 447 PDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRL 506
Query: 288 -----------QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
L Y +I+ AR +++ +K Y + + +G D+ I++ V
Sbjct: 507 FCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGH 566
Query: 337 LSQIEE 342
+EE
Sbjct: 567 CGFLEE 572
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YEKM+ AG+ D+ Y ++ K G LF C P+ Y I+ +
Sbjct: 472 YEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLF--CRMVDEGCVPNLV-TYNIMI-A 527
Query: 70 LGKSGRAFEI-LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L R +EI LK +RDM++ G D Y ++ ++ AE +F E ++K +
Sbjct: 528 LQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVP 587
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCVIVNGFSKRRAYWAAVK 186
D V+ LV ++ + G V+K E +M A L N+ C S +++ F + A +
Sbjct: 588 DEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNS--LLSAFLRVHQLSDAYQ 645
Query: 187 VYEQLISQGCIPGQVTYASIIN 208
+ + +++ G P TY +++
Sbjct: 646 LLQSMLTFGLKPSLQTYTLLLS 667
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + L Y M+ +G D YC +ME G E+ +F+E + K + P
Sbjct: 534 NYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQ--KKNWVPDEP- 590
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D GKSG + +++ M + G+ + SL+ +F + ++ A +L +
Sbjct: 591 VYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSM 650
Query: 122 EEKGMLRDLEVFLKLV 137
G+ L+ + L+
Sbjct: 651 LTFGLKPSLQTYTLLL 666
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 14/271 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ MKS+G++ ++ ++ +IG LF E ++ L S++H IL
Sbjct: 48 FSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPF-LPTSASH--NILLRG 104
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+GRA E FF++MK G+ D Y L+ + + + A LF M
Sbjct: 105 FFMAGRAIE---FFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALF-----SAMTCS 156
Query: 130 LEVFLKLVLM--YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
++ VLM Y + G + +++ + A + +I+N + K A +V
Sbjct: 157 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 216
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYG 246
+ ++I C+P VT+ ++I +C+ G+ A K+F EM++ G +V Y++++ ++
Sbjct: 217 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 276
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G + A+ L K++ G P + YNSL+
Sbjct: 277 KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 307
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 120/253 (47%), Gaps = 29/253 (11%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L + H Y +L K G+ + + F DMK G+L + S +L+ I ++ A
Sbjct: 20 LFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSA 79
Query: 115 EELFKEAEEKGMLR---DLEVFLKLVLMY---------IEEGMVEKTLE--------VVE 154
+LF+E + L + L+ M ++ VE LE + +
Sbjct: 80 LKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSD 139
Query: 155 SMKNAELN-ISDCISC--------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
S + AE + + ++C V+++G+ K + A + ++++ G P TY+
Sbjct: 140 SGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSI 199
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
IIN YC++ +A +VF++M + V +++++A + K G + DA++L A+M+ G
Sbjct: 200 IINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIG 259
Query: 266 CEPNVWIYNSLMD 278
C+ + YN+L+D
Sbjct: 260 CKATIVTYNTLID 272
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 121/272 (44%), Gaps = 12/272 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ ++++MK++G+ D Y ++ A G + ALF + +P Y +L
Sbjct: 112 IEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALF-----SAMTCSPD-IMTYNVL 165
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D K G+ +E +++ + G + Y+ +I + + +V+ A E+F + E
Sbjct: 166 MDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNC 225
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR-AYWAAV 185
+ + F L+ + + GM+E +++ M+ + +++ K+R + AV
Sbjct: 226 VPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAV 285
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
++ +L G P VTY S+I + + ++ M +G V+ Y+ +++
Sbjct: 286 DLFNKLEGAGLTPTIVTYNSLIQGFSERA--NDGLRLLCHMHAEGCKPDVITYNCLISGL 343
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R+ DA RL M C PNV +N L+
Sbjct: 344 CSANRVEDAQRLFNGM---ACAPNVTTFNFLI 372
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 88/223 (39%), Gaps = 13/223 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KM + V ++ + ++ F K G E LF E E T + Y L DS
Sbjct: 217 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVT---YNTLIDS 273
Query: 70 L-GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K G + + F ++ G+ Y SLI F+ A + L +G
Sbjct: 274 LCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGL--RLLCHMHAEGCKP 331
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ VE + M A N++ ++ G ++ A +
Sbjct: 332 DVITYNCLISGLCSANRVEDAQRLFNGMACAP-NVT--TFNFLIRGLCAQKKVEEARNIL 388
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
+++ + P T+ +II A+C+ G A +V +M + GF
Sbjct: 389 DRMTA----PDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGF 427
>gi|255570073|ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534731|gb|EEF36423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 557
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 129/270 (47%), Gaps = 10/270 (3%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILC 67
++++M+ GIV + + +++ + KIG+ + L+ + C+S L + + Y L
Sbjct: 98 FFKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAYQLYKDMCKSMHL----PNVYTYAALI 153
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ K G FF M E GI+ + +VY S+I + VA + F E ++
Sbjct: 154 NGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFR 213
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ + ++ + G ++K LEV+E M L + +++ K AA V
Sbjct: 214 LDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGV 273
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
Y +L+++G P VT +S+I+ C+ G Y A+ F + + V+Y++++ K
Sbjct: 274 YRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCKEKANE-----VSYTALIDGICK 328
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G + + R+V +M G P+ ++Y S +
Sbjct: 329 EGNLDEVERVVMEMSESGFVPDKFVYTSWI 358
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 17/223 (7%)
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G L D+ + L+ Y + G VE+ ++ ++NAE + + NGF KR+
Sbjct: 2 GSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMK-EE 60
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V +Y L+ + C+P +TY + I+ C++G K F EM++ G ++A++ ++
Sbjct: 61 VFIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDG 120
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD------MHGRAK--NLRQLE------ 290
Y K G + A +L M PNV+ Y +L++ M RA+ L+ LE
Sbjct: 121 YSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPN 180
Query: 291 --KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
YT++I + D+ +K+++E R +D G+++
Sbjct: 181 STVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVI 223
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 95 PSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEV 152
P+V Y + I + + ++ + FKE + G++ +L F L+ Y + G ++ ++
Sbjct: 74 PNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAYQL 133
Query: 153 VESMKNAELNISDCISCVIVNGFSKR----RAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+ M + + ++NGF KR RA W +K+ E G +P Y SII+
Sbjct: 134 YKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLE----VGIMPNSTVYTSIID 189
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
+ + G A K F EM+++ F +VAY +++ GR+ + ++ M G P
Sbjct: 190 GHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAP 249
Query: 269 NVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREF 305
+ + +LM H +A N + +AY + RE
Sbjct: 250 DKVVLTTLMHAHFKAGNTK---------AAYGVYREL 277
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 121/279 (43%), Gaps = 12/279 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLEC--ESRKLDLTPSSTHMYKIL 66
++ KM GI+ +S Y I++ +K G+ + F E ES +LD+ Y ++
Sbjct: 168 FFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVA-----YGVV 222
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L +GR ++L+ DM G+ D V +L+ + K A +++E +G
Sbjct: 223 ISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGF 282
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D L+ ++G K E++ + +++G K +
Sbjct: 283 EPDAVTISSLIDGLCKDGRYHDAKGYFCKEKANEVSYT-----ALIDGICKEGNLDEVER 337
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V ++ G +P + Y S I CR G +A KV +M ++G D ++ YSS++
Sbjct: 338 VVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLA 397
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
G + +A +L M +G P+ +++ L+ + + N
Sbjct: 398 NKGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQDN 436
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/194 (18%), Positives = 83/194 (42%), Gaps = 8/194 (4%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N+++ Y ++ + G D+ +++ K G F C+ + +++
Sbjct: 266 NTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYF--CKEKANEVS----- 318
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D + K G E+ + +M E G + D VY S I ++ A ++ +
Sbjct: 319 -YTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKM 377
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E+G+ DL + L+ +G++ + ++ + M + + +++ G+ K+
Sbjct: 378 VEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQDNP 437
Query: 182 WAAVKVYEQLISQG 195
A ++E++ +G
Sbjct: 438 VAISHLHEEMRRRG 451
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 105/216 (48%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D GK GR + MK++G+ Y +LI + + + A +++
Sbjct: 141 YNTLVDVYGKLGRWERAIHVLDLMKQEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLL 200
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G + + L+ Y + + K LEV + M + S +++ K +
Sbjct: 201 SDGYTPNSTTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQWE 260
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++++ ++ C+P VTY S++ A + G + KA +VF +M G VV Y++++
Sbjct: 261 TALRIFNEMQQDNCVPNTVTYNSLVTACAQGGQWEKATEVFEQMTAHGCTPDVVTYTALI 320
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ Y + G+ + A++ KM +GC+P+ +YN+++D
Sbjct: 321 SAYERGGQWQKALQAFGKMCMQGCKPDAIVYNAIID 356
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 128/307 (41%), Gaps = 60/307 (19%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILE---DPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
LGK RA E+ + R E+ L D Y + I +V A EL E ++ +
Sbjct: 40 LGKDRRAMELFDWLRSANERSPLRQLCDVYSYTATISLCIYSQDVDRAMELMNEMRQRNI 99
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMK--NAELNISDCISCVIVNGFSKR------ 178
R++ F L+ + I+ G + LE+ +M+ N N+ + V V G R
Sbjct: 100 ERNVHTFTALMNVCIKCGKLPLALEIYNNMRAANCMPNVVTYNTLVDVYGKLGRWERAIH 159
Query: 179 --------------RAYWA-------------AVKVYEQLISQGCIPGQVTYASIINAYC 211
R Y A+ VY++L+S G P TY ++I+AY
Sbjct: 160 VLDLMKQEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGYTPNSTTYNALISAYG 219
Query: 212 RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
+ KA +V+ EM ++ ++ V+ YSS+++ K G+ A+R+ +M+ C PN
Sbjct: 220 KTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQWETALRIFNEMQQDNCVPNTV 279
Query: 272 IYNSL-------------------MDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFY 312
YNSL M HG ++ YT +ISAY ++ ++ +
Sbjct: 280 TYNSLVTACAQGGQWEKATEVFEQMTAHGCTPDV---VTYTALISAYERGGQWQKALQAF 336
Query: 313 NEFRMNG 319
+ M G
Sbjct: 337 GKMCMQG 343
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 109/245 (44%), Gaps = 3/245 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L Y M++A + + Y +++ + K+G E+ + + K + Y L
Sbjct: 123 LEIYNNMRAANCMPNVVTYNTLVDVYGKLGRWERAIHVL---DLMKQEGVEPVLRTYNTL 179
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ + E L ++ + G + + Y +LI ++ ++ A E+++E + M
Sbjct: 180 IIACNMCNQPREALAVYQRLLSDGYTPNSTTYNALISAYGKTMQLGKALEVYQEMLRQNM 239
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
R + + L+ + G E L + M+ + +V ++ + A +
Sbjct: 240 ERSVITYSSLISACEKAGQWETALRIFNEMQQDNCVPNTVTYNSLVTACAQGGQWEKATE 299
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V+EQ+ + GC P VTY ++I+AY R G + KA + F +M +G + Y++++
Sbjct: 300 VFEQMTAHGCTPDVVTYTALISAYERGGQWQKALQAFGKMCMQGCKPDAIVYNAIIDTLW 359
Query: 247 KTGRI 251
+TG I
Sbjct: 360 ETGII 364
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 112/249 (44%), Gaps = 9/249 (3%)
Query: 37 DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
D ++ L E R ++ + H + L + K G+ L+ + +M+ + +
Sbjct: 83 DVDRAMELMNEMRQRNIE---RNVHTFTALMNVCIKCGKLPLALEIYNNMRAANCMPNVV 139
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
Y +L+ + + + A + +++G+ L + L++ + L V + +
Sbjct: 140 TYNTLVDVYGKLGRWERAIHVLDLMKQEGVEPVLRTYNTLIIACNMCNQPREALAVYQRL 199
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ + +++ + K A++VY++++ Q +TY+S+I+A + G +
Sbjct: 200 LSDGYTPNSTTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQW 259
Query: 217 SKAEKVFIEMQQKGFDKCV---VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
A ++F EMQQ D CV V Y+S+V + G+ A + +M GC P+V Y
Sbjct: 260 ETALRIFNEMQQ---DNCVPNTVTYNSLVTACAQGGQWEKATEVFEQMTAHGCTPDVVTY 316
Query: 274 NSLMDMHGR 282
+L+ + R
Sbjct: 317 TALISAYER 325
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A ++ EM+Q+ ++ V +++++ + K G++ A+ + M+ C PNV YN+L+
Sbjct: 86 RAMELMNEMRQRNIERNVHTFTALMNVCIKCGKLPLALEIYNNMRAANCMPNVVTYNTLV 145
Query: 278 DMHG------RAKNLRQLEK----------YTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
D++G RA ++ L K Y T+I A NM + + Y +G
Sbjct: 146 DVYGKLGRWERAIHVLDLMKQEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGYT 205
Query: 322 IDRAMAGIMVGVFSKLSQI 340
+ ++ + K Q+
Sbjct: 206 PNSTTYNALISAYGKTMQL 224
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+Y +L K G + E + F +M D Y S++ S S ++ A +L
Sbjct: 361 QIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNR 420
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
EK + D ++ + V ++ E MK ++++ + +
Sbjct: 421 FHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGR 480
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+AVK++E+L + C P ++Y S+IN + G +A F EMQ+KG + VV YS+
Sbjct: 481 VDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYST 540
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +GKT ++ A L +M +GC PN+ YN L+D
Sbjct: 541 LIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLD 578
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 120/269 (44%), Gaps = 9/269 (3%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y + K+G S + LF C + Y + +SL SG+ E +
Sbjct: 363 YAYFVRTLSKLGHSSEAHRLF--CNMWNVH-DKGDKDAYMSMLESLCSSGKIAEAIDLLN 419
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
EK I D +Y ++ + + +V +L+++ ++ G D+ + L+ Y G
Sbjct: 420 RFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAG 479
Query: 145 MVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
V+ +++ E ++N+ D IS ++N K A ++++ +G P VTY
Sbjct: 480 RVDSAVKIFEELENSNCQ-PDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTY 538
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+++I + + A +F EM +G +V Y+ ++ ++GR +A+ L AK+K
Sbjct: 539 STLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQ 598
Query: 264 KGCEPNVWIYNSLMDM----HGRAKNLRQ 288
+G P+ Y L + HG+ + RQ
Sbjct: 599 QGLTPDSITYAVLERLQSGRHGKLRVRRQ 627
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 146/361 (40%), Gaps = 57/361 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y M G LD + +++A K +K +F + + R + T Y I+
Sbjct: 211 YLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCE---PDTFTYTIMIRM 267
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK+G+ E L F+ M EKG + Y ++I + A A LF + E G +
Sbjct: 268 TGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPN 327
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-------RRAY- 181
+ L+ + + EG + K +VE K ++ I V SK R +
Sbjct: 328 EFTYSVLLNVLVAEGQLNKLDNIVEMSKKY---MNKQIYAYFVRTLSKLGHSSEAHRLFC 384
Query: 182 --W---------AAVKVYEQLISQG---------------CIPGQ-VTYASIINAYCRIG 214
W A + + E L S G CI + Y ++ A R+
Sbjct: 385 NMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLK 444
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
S ++ +M+Q G + Y+ +++ YG+ GR+ A+++ +++ C+P+V YN
Sbjct: 445 QVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYN 504
Query: 275 SLMD----------MHGRAKNLRQ------LEKYTTVISAYNMAREFDMCVKFYNEFRMN 318
SL++ H R K +++ + Y+T+I + + +M ++E
Sbjct: 505 SLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAE 564
Query: 319 G 319
G
Sbjct: 565 G 565
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 121/289 (41%), Gaps = 22/289 (7%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-----CESRKLDLTP 57
+ L ++ M G L+ Y ++EA K ++K LF + C+ +
Sbjct: 274 TDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEF---- 329
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
Y +L + L G+ L +M +K + + +YA + + + + A L
Sbjct: 330 ----TYSVLLNVLVAEGQ-LNKLDNIVEMSKKYM--NKQIYAYFVRTLSKLGHSSEAHRL 382
Query: 118 F---KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
F +KG D + ++ ++ G + + ++++ + + +
Sbjct: 383 FCNMWNVHDKG---DKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTA 439
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+ + +YE++ G P TY +I++Y R G A K+F E++
Sbjct: 440 LGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPD 499
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
V++Y+S++ GK G + +A +M+ KG P+V Y++L++ G+
Sbjct: 500 VISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKT 548
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/309 (18%), Positives = 119/309 (38%), Gaps = 50/309 (16%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
+ DM G D + L+ + A +V A ++F++ + + D + ++ M +
Sbjct: 211 YLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGK 270
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G +++L + ++M ++ ++ +K R AV ++ +++ GC P + T
Sbjct: 271 AGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFT 330
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV-------------------------- 236
Y+ ++N G +K + + +EM +K +K +
Sbjct: 331 YSVLLNVLVAEGQLNKLDNI-VEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNV 389
Query: 237 -------AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
AY SM+ +G+I +A+ L+ + K + +YN++ GR K + +
Sbjct: 390 HDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHI 449
Query: 290 EK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
Y +IS+Y A D VK + E + D ++
Sbjct: 450 HDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINC 509
Query: 334 FSKLSQIEE 342
K ++E
Sbjct: 510 LGKNGDVDE 518
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
+Y ++ Y R+ KA V+++M + G+ + A++ ++ K ++ A ++ M
Sbjct: 190 SYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDM 249
Query: 262 KPKGCEPNVWIYNSLMDMHGRAKNLRQ--------LEK--------YTTVISAYNMAREF 305
K + CEP+ + Y ++ M G+A + LEK Y T+I A R
Sbjct: 250 KRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMA 309
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
D V +++ NG + +++ V Q+ +L
Sbjct: 310 DKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKL 347
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFA-- 106
+S + LTP ++ SL AF+ F +K DP +Y L + +
Sbjct: 83 QSLSIPLTPLEA---SLILKSLKNPTLAFKFFHFCPSLKN-----DPFIYNRLFLTLSRS 134
Query: 107 -SIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISD 165
S + E L + E++G+ + L+ + G +++ + +V K L +
Sbjct: 135 SSQLRFEQTESLLDDMEKRGVKGSISTVNILIGFF---GDLDRCVGLV---KKWGLRFNA 188
Query: 166 CISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
++ G+ + R A VY ++ G + +++A + KA KVF +
Sbjct: 189 YSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFED 248
Query: 226 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
M+++ + Y+ M+ M GK G+ +++ L M KG N+ YN++++ + +
Sbjct: 249 MKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGR 307
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M+ G+ D Y ++E F K E +LF E + +P+ Y IL D
Sbjct: 523 FKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAE--GCSPNLV-TYNILLDC 579
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASL 101
L +SGR E + + +K++G+ D YA L
Sbjct: 580 LERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 611
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 138/343 (40%), Gaps = 54/343 (15%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
GI+LD+ Y +++ +G ++V L + +D + + IL D+L K GR
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD---PDDYTFNILIDALCKEGRI 281
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
E M ++G D Y +L+ + S V A ELF ++G+ D
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD------- 334
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
VL Y V+++G+ K + A+ ++++L ++
Sbjct: 335 VLNY----------------------------NVLIDGYCKTKMVDEAMVLFKELCNKNL 366
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
+P +Y S+I+ C G S +K+ EM VV Y+ ++ K GRI +A+
Sbjct: 367 VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALG 426
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR----------------QLEKYTTVISAYN 300
++ M KG +PN+ YN++MD + N+ + Y +I+ Y
Sbjct: 427 VLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYC 486
Query: 301 MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
D + + E R + D A ++ L +I +
Sbjct: 487 KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHV 529
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 125/304 (41%), Gaps = 14/304 (4%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +ME + + + LF R L+ P + Y +L D K+ E + F+
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRGLE--PDVLN-YNVLIDGYCKTKMVDEAMVLFK 359
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
++ K ++ + Y SLI + + ++L E D+ + L+ +EG
Sbjct: 360 ELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEG 419
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ + L V+ M + + +++G+ R A ++ +++ G P + Y
Sbjct: 420 RILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYN 479
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+IN YC+ + +A +F EM+ K + +Y+S++ GRI L+ +M
Sbjct: 480 VLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDS 539
Query: 265 GCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDR 324
G P+V YN L+D + + + IS + E + +F N ++D
Sbjct: 540 GQSPDVITYNILLDAFCKT------QPFDKAISLFRQIVE-----GIWPDFYTNHAIVDN 588
Query: 325 AMAG 328
G
Sbjct: 589 LCKG 592
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + L K+G+ L ++M++ + + +Y++LI V A L +
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G+L D + L+ G ++ +++ M ++ D ++++ K
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A V + +G P VTY +++ YC +A ++F M ++G + V+ Y+ ++
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
Y KT + +AM L ++ K P + YNSL+D GR ++++L
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 3/197 (1%)
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
SV+ L+ + + A LF + + KG+ + F L+ Y + ++ +
Sbjct: 56 SVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLAT 115
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
+ + + I+NGF + A+ + L++QG + Q TY ++IN + G
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQ 175
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
A + EM++ +V YS+++ K G + DA+ L +++ +G + YNS
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNS 235
Query: 276 LMD---MHGRAKNLRQL 289
L+D GR + + QL
Sbjct: 236 LIDGCCSVGRWQEVTQL 252
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 121/262 (46%), Gaps = 3/262 (1%)
Query: 27 QIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDM 86
+++ A ++G +LF + +S+ + +PS ++ +S AF +
Sbjct: 60 KLLGAIVRMGHYPTAISLFTQLQSKGI--SPSIATFTILINCYFHQSHTAFA-FSLLATI 116
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
+ G + + ++I F + A + + +G L D + L+ + G +
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
+ L +++ M+ + + + + +++G K A+ + Q+ +G + VTY S+
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL 236
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+ C +G + + ++ +M ++ D ++ ++ K GRI +A ++A M +G
Sbjct: 237 IDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE 296
Query: 267 EPNVWIYNSLMDMHGRAKNLRQ 288
+P++ YN+LM+ + +N+ +
Sbjct: 297 KPDIVTYNALMEGYCSRENVHE 318
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 103/253 (40%), Gaps = 38/253 (15%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y IL D+L K GR E L M +KG+ + Y +++ + V VA++
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-------- 168
+F + G+ D+ + L+ Y + MV++ + + + M++ L I D S
Sbjct: 462 IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL-IPDIASYNSLIDGL 520
Query: 169 ----------------C------------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
C ++++ F K + + A+ ++ Q++ +G P
Sbjct: 521 CNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDF 579
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
T +I++ C+ AE + G V Y+ ++ K G +AM L++K
Sbjct: 580 YTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSK 639
Query: 261 MKPKGCEPNVWIY 273
M+ P+ +
Sbjct: 640 MEDNDRPPDAITF 652
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 86/204 (42%), Gaps = 3/204 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L + K+ E + F++M+ K ++ D + Y SLI ++ + +EL E
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC-ISCVIVNGFSKRRAY 181
+ G D+ + L+ + + +K + + + E D + IV+ K
Sbjct: 538 DSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI--VEGIWPDFYTNHAIVDNLCKGEKL 595
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + L+ GC P TY +INA C+ G + +A + +M+ + + +
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKG 265
+ + + A +L +M +G
Sbjct: 656 IGVLLQRNETDKAEKLREEMIARG 679
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 45/95 (47%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV + +++ P + ++ A R+G Y A +F ++Q KG + ++ ++
Sbjct: 39 AVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILIN 98
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y A L+A + G +PN+ +N++++
Sbjct: 99 CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIIN 133
>gi|413934892|gb|AFW69443.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
Length = 561
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 130/278 (46%), Gaps = 14/278 (5%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ GI LD+ Y ++ + G +K L +E + ++L +Y L D+ G
Sbjct: 183 EMRRWGIRLDTAGYSMLVRLYRDNGMWKKATDLVMEMQEVGVEL---DVKIYSGLIDTFG 239
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ + + F M+ +G+ D S + +LI + +K A F +E+GM D +
Sbjct: 240 KYGQLADARRMFDKMRAEGVRPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPK 299
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+F+ ++ E+G ++ ++ + M N S + ++V+ + + + A L
Sbjct: 300 IFVMIISRLGEQGKWDEIKKLFDGMNNRGFKESGAVYAILVDIYGQYGHFRDAQDCIAAL 359
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
++ + I NAY A+++ M+++GF+ +V +S++ +G GR
Sbjct: 360 RAENTQLLPRVFCVIANAY--------AQQL---MEEEGFEPNLVMLNSLINAFGTAGRH 408
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+A+ + +K G P+V Y +LM RAK ++
Sbjct: 409 LEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKV 446
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 130/288 (45%), Gaps = 3/288 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+++G Y +++ A + G + A L E R+L P + H Y L + L
Sbjct: 79 MQASGGRPSGSAYARLIRALSRAG--RALEAEALLLEMRRLGPRPEAAH-YNALLEGLLA 135
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ M + G+ + Y L+ ++A ++ + + E G+ D
Sbjct: 136 AAHLRLADLLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRWGIRLDTAG 195
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ LV +Y + GM +K ++V M+ + + I +++ F K A ++++++
Sbjct: 196 YSMLVRLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMR 255
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
++G P T+ ++I +CR+G +A + F MQ++G + +++ G+ G+
Sbjct: 256 AEGVRPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWD 315
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
+ +L M +G + + +Y L+D++G+ + R + + A N
Sbjct: 316 EIKKLFDGMNNRGFKESGAVYAILVDIYGQYGHFRDAQDCIAALRAEN 363
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%)
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y+ ++ Y G++ KA + +EMQ+ G + V YS ++ +GK G++ DA R+ KM+
Sbjct: 196 YSMLVRLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMR 255
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+G P++ +N+L+ H R N+++ ++ T + M
Sbjct: 256 AEGVRPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGM 294
>gi|15228104|ref|NP_181260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216851|sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230
gi|4056478|gb|AAC98044.1| unknown protein [Arabidopsis thaliana]
gi|28973644|gb|AAO64144.1| unknown protein [Arabidopsis thaliana]
gi|110736716|dbj|BAF00321.1| hypothetical protein [Arabidopsis thaliana]
gi|330254276|gb|AEC09370.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 757
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 124/260 (47%), Gaps = 38/260 (14%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGIL-EDPSVYASLICSFASIAEVK 112
DL P H ++ + L + + L+FFR + G++ D + +I ++++
Sbjct: 110 DLVPEWDH--SLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLN 167
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN--AELNI---SDCI 167
A + + EKG+ D ++F+ L+ Y + G+V++++++ + MK+ E I +
Sbjct: 168 HARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLF 227
Query: 168 SCVIVNG--------FSK---------RRAY----WA---------AVKVYEQLISQGCI 197
++ G F+K R Y W A++ +E + ++G
Sbjct: 228 KVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGIS 287
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P T+ ++IN +CR +AEK+F+EM+ VV+Y++M+ Y R+ D +R+
Sbjct: 288 PDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRI 347
Query: 258 VAKMKPKGCEPNVWIYNSLM 277
+M+ G EPN Y++L+
Sbjct: 348 FEEMRSSGIEPNATTYSTLL 367
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P M+ +L +S GK+G E +K F+ MK+ G+ Y SL +A+
Sbjct: 182 PWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKR 241
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
F + +G+ + ++ + +E L E MK ++ D ++NGF
Sbjct: 242 YFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFC 301
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+ + A K++ ++ P V+Y ++I Y + ++F EM+ G +
Sbjct: 302 RFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNAT 361
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
YS+++ G++ +A ++ M K P
Sbjct: 362 TYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP 393
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 121/274 (44%), Gaps = 17/274 (6%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
++ L ++E MK+ GI D + ++ F + ++ LF+E + K + PS Y
Sbjct: 272 ETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNK--IGPSVVS-Y 328
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ R + L+ F +M+ GI + + Y++L+ ++ A+ + K
Sbjct: 329 TTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMA 388
Query: 124 KGML-RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
K + +D +FLKL++ + G + EV+++M + V++ K AY
Sbjct: 389 KHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYN 448
Query: 183 AAVKVYEQLISQGCI----------PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
A+K+ + LI + I P Y II C G +KAE +F ++ ++G
Sbjct: 449 RAIKLLDTLIEKEIILRHQDTLEMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLMKRGV- 505
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
+ A ++++ + K G + ++ M +G
Sbjct: 506 QDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGV 539
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 115/228 (50%), Gaps = 1/228 (0%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E R TP Y ++ + + + GR + ++F +++ G + Y ++ +
Sbjct: 218 EMRDKGCTPDIV-TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTA 276
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ AEEL E +KG ++ F L+ +G+VE LEV+E + +
Sbjct: 277 ERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSY 336
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ F K++ A+ + ++S+GC P V+Y +++ A CR G A ++ +++
Sbjct: 337 NPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 396
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
KG +++Y++++ K G+ ++A+ L+ +M KG +P++ Y+++
Sbjct: 397 KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 444
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 116/278 (41%), Gaps = 16/278 (5%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ Y L L GR L +M + + D Y L+ + + K A +L
Sbjct: 156 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 215
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E +KG D+ + +V +EG V+ +E ++++ + + +++ G
Sbjct: 216 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 275
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ ++ +GC P VT+ +I+ CR GL A +V ++ + G ++
Sbjct: 276 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 335
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLE 290
Y+ ++ + K ++ AM + M +GC P++ YN+L+ R+ L QL+
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 395
Query: 291 ---------KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y TVI A + ++ NE G
Sbjct: 396 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 433
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 106/252 (42%), Gaps = 16/252 (6%)
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
R + E + D Y +LI A + E + + D+ + L+ +
Sbjct: 147 RLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 206
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
++ +++++ M++ V+VNG + A++ + L S GC P V+Y
Sbjct: 207 SGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSY 266
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
++ C + AE++ EM QKG VV ++ +++ + G + A+ ++ ++
Sbjct: 267 NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 326
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDM 307
GC PN YN L+ + K + + + Y T+++A + E D+
Sbjct: 327 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 386
Query: 308 CVKFYNEFRMNG 319
V+ ++ + G
Sbjct: 387 AVELLHQLKDKG 398
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 3/227 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L E++ G +S Y ++ AF K +K A SR P Y
Sbjct: 315 EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC--YPDIVS-Y 371
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L +L +SG ++ +K+KG Y ++I + K A EL E
Sbjct: 372 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 431
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ D+ + + E +E + +++ + + + I+ G KRR +
Sbjct: 432 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 491
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
A+ ++ +I GC+P + TY +I GL +A + E+ +G
Sbjct: 492 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 95/225 (42%), Gaps = 6/225 (2%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + +L L + G L+ + + G + Y L+ +F ++ A
Sbjct: 295 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 354
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN---AELNISDCISCVIVN 173
+G D+ + L+ G V+ +E++ +K+ A + IS +++
Sbjct: 355 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS---YNTVID 411
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G +K A+++ +++S+G P +TY++I CR A + F ++Q G
Sbjct: 412 GLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP 471
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V Y++++ K A+ L A M GC PN Y L++
Sbjct: 472 NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE 516
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 24/169 (14%)
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L+ P T A++I G ++A +V + G D V+AY++MVA Y G
Sbjct: 86 RLVGSARRPDAGTCAALIKKLSASGRTAEARRV---LAACGPD--VMAYNAMVAGYCGAG 140
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM-DMHGRAKNLRQLE---------------KYT 293
++ A RLVA+M EP+ + YN+L+ + GR + L YT
Sbjct: 141 QLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYT 197
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++ A + +K +E R G D ++V + ++++
Sbjct: 198 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 246
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 120/255 (47%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y + LG++ + I K M + G + Y +I S+ ++ A +FK+
Sbjct: 380 HTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQ 439
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G D + L+ ++ + G ++ + + E M++A L V++N K
Sbjct: 440 MQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGH 499
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AA +++ +++ +GC+P VTY +I + Y A K++ +MQQ GF+ V Y
Sbjct: 500 LNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCI 559
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
++ + G G + +A + +M+ K P+ +Y L+D+ G++ N+++ ++ +
Sbjct: 560 VMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAG 619
Query: 301 MAREFDMCVKFYNEF 315
+ C + F
Sbjct: 620 LKPNVPTCNSLLSAF 634
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 17/186 (9%)
Query: 174 GFSKRRAYWAAV-KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
G R +AA+ K+ +Q+I GC P VTY II++Y R A VF +MQ+ G +
Sbjct: 387 GLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCE 446
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR----- 287
V Y +++ ++ K+G + AM + KM+ G P+ + Y+ +++ G+A +L
Sbjct: 447 PDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRL 506
Query: 288 -----------QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
L Y +I+ AR +++ +K Y + + +G D+ I++ V
Sbjct: 507 FCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGH 566
Query: 337 LSQIEE 342
+EE
Sbjct: 567 CGFLEE 572
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
YEKM+ AG+ D+ Y ++ K G LF C P+ Y I+ +
Sbjct: 472 YEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLF--CRMVDEGCVPNLV-TYNIMI-A 527
Query: 70 LGKSGRAFEI-LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L R +EI LK +RDM++ G D Y ++ ++ AE +F E ++K +
Sbjct: 528 LQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVP 587
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAEL--NISDCISCVIVNGFSKRRAYWAAVK 186
D V+ LV ++ + G V+K E +M A L N+ C S +++ F + A +
Sbjct: 588 DEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNS--LLSAFLRVHQLSDAYQ 645
Query: 187 VYEQLISQGCIPGQVTYASIIN 208
+ + +++ G P TY +++
Sbjct: 646 LLQSMLTFGLKPSLQTYTLLLS 667
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + L Y M+ +G D YC +ME G E+ +F+E + K + P
Sbjct: 534 NYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQ--KKNWVPDEP- 590
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y +L D GKSG + +++ M + G+ + SL+ +F + ++ A +L +
Sbjct: 591 VYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSM 650
Query: 122 EEKGMLRDLEVFLKLV 137
G+ L+ + L+
Sbjct: 651 LTFGLKPSLQTYTLLL 666
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 139/305 (45%), Gaps = 25/305 (8%)
Query: 61 HMYKILCDSLGK---SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
Y ++ + L K + +A+E+LK RD K + D Y+++I F E+ A E+
Sbjct: 10 RTYNVVVNGLCKARLTSKAYEVLKEMRD--GKSVAPDLVTYSTVINGFCKQGEMDRACEI 67
Query: 118 FKE-AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+E GM D+ + +V +G +++ E+V MK + ++ G+
Sbjct: 68 LREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWC 127
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK---GFDK 233
R A+K+Y+++++ C V+ +++I CR +A ++F EM+ + +
Sbjct: 128 NARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKP 187
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----- 288
VV Y++++ + K+G + AM+++ M+ + C PNV Y+SL+ +A +L Q
Sbjct: 188 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 247
Query: 289 -----------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKL 337
+ YTT+I A + D +E D ++ + +L
Sbjct: 248 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRL 307
Query: 338 SQIEE 342
+IEE
Sbjct: 308 GRIEE 312
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 143/346 (41%), Gaps = 57/346 (16%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ F K G+ ++ + E +R D Y + D L + G+ + R
Sbjct: 48 YSTVINGFCKQGEMDRACEILREMVTR--DGMAPDVVTYTSVVDGLCRDGKMDRACEMVR 105
Query: 85 DMKEKGILEDPSVYASLI-----------------------CSFASIA----------EV 111
+MK KG+ D +++LI C +++ E
Sbjct: 106 EMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRER 165
Query: 112 KVAE--ELFKEAE--EKGMLR-DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC 166
++ E ELF+E E E G + D+ + L+ + + G +EK ++++ M+ + +
Sbjct: 166 RIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVV 225
Query: 167 ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
+++G K A+ ++ ++ S+GC+P VTY ++I+ C A + EM
Sbjct: 226 TYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM 285
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
V+Y++++ Y + GRI +A +L +M K C P+ Y L+ A L
Sbjct: 286 TATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRL 345
Query: 287 RQ----LEK-------------YTTVISAYNMAREFDMCVKFYNEF 315
+ LE Y+ V++ Y+ A+ F +F E
Sbjct: 346 EEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 391
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 131/346 (37%), Gaps = 55/346 (15%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +M S G V + Y ++ + KV A L + P+ T Y L
Sbjct: 244 LDLFRRMTSKGCVPNVVTYTTLIHGLCA---AHKVDAARLLMDEMTATCCPADTVSYNAL 300
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI---CSFASIAEVKV---------- 113
D + GR E + F++M K L D Y L+ C+ + + E +
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 360
Query: 114 -----------------------AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTL 150
A E +E + + + + L+ + G V +
Sbjct: 361 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM 420
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
EV++++ ++ +++ G A+ + E+++++ P T+ S+I A
Sbjct: 421 EVLKNVDKPDV----VTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGAL 476
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
CR+G +A K+ + M G + +V Y++++ + +TGR+ A L M+ K
Sbjct: 477 CRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKA----- 531
Query: 271 WIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFR 316
A NL + ++ +I ARE D + E R
Sbjct: 532 -------KKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELR 570
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQ-KGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
P + TY ++N C+ L SKA +V EM+ K +V YS+++ + K G + A
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66
Query: 257 LVAKMKPK-GCEPNVWIYNSLMD-------MHGRAKNLRQLE---------KYTTVISAY 299
++ +M + G P+V Y S++D M + +R+++ ++ +I+ +
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126
Query: 300 NMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
AR+ D +K Y E + +D + ++ + +I E
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGE 169
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 71/176 (40%), Gaps = 7/176 (3%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y I+ + L + R E L +M K + + S+I + + ++ A +L
Sbjct: 434 YTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMA 493
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-------IVNGF 175
G+ + + L+ + G +E E+ E M+ S + V ++ G
Sbjct: 494 AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGL 553
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
K R A+ V E+L S+ C P + +I++ R G +A K+ + + G
Sbjct: 554 CKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G + Y ++ K G + L + E R + L Y I+ D L
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK---YSIIIDGL 273
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G F +M+ KG D Y +LI F + +L ++ ++ + ++
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +++EG + + ++++ M + + +++GF K A+++ +
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+IS+GC P +T+ +IN YC+ ++F EM +G V Y+++V + ++G+
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ A +L +M + P++ Y L+D
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/335 (18%), Positives = 132/335 (39%), Gaps = 26/335 (7%)
Query: 23 GCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKF 82
C+C+ + Y K+ L E T ++ L + L R E L+
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYE----------PDTVIFNTLLNGLCLECRVSEALEL 180
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
M E G +L+ +V A L E G + + ++ + +
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G +E++ M+ + + +I++G K + A ++ ++ +G +T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIT 300
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y ++I +C G + K+ +M ++ VV +S ++ + K G++R+A +L+ +M
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFD 306
+G PN YNSL+D + L + + + +I+ Y A D
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 307 MCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
++ + E + G + + +V F + ++E
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 118/271 (43%), Gaps = 3/271 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + + +M+ G D Y ++ F G + A L + RK+ +P+ +
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI--SPNVVT-F 336
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+L DS K G+ E + ++M ++GI + Y SLI F ++ A ++
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG D+ F L+ Y + ++ LE+ M + + +V GF +
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A K++++++S+ P V+Y +++ C G KA ++F ++++ + + Y ++
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIH 516
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
++ DA L + KG + + YN
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 123/272 (45%), Gaps = 3/272 (1%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
++M GI ++ Y +++ F K E+ + S+ D + IL
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD---PDIMTFNILI 410
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ K+ R + L+ FR+M +G++ + Y +L+ F +++VA++LF+E + +
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ + L+ + G +EK LE+ ++ +++ + I +I++G A +
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ L +G Y +I+ CR SKA+ +F +M ++G + Y+ ++ +
Sbjct: 531 FCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
A L+ +MK G +V +++M
Sbjct: 591 DDDATTAAELIEEMKSSGFPADVSTVKMVINM 622
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 76/181 (41%), Gaps = 16/181 (8%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N F + R A +++ G P V + +++N C S+A ++ M +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN---- 285
G ++ +++V G++ DA+ L+ +M G +PN Y ++++ ++
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 286 ---LRQLE---------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
LR++E KY+ +I D +NE + G D ++G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 334 F 334
F
Sbjct: 308 F 308
>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 426
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 142/302 (47%), Gaps = 17/302 (5%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R+ L+P + Y L GK G L + + M++ + D +Y++LI + +
Sbjct: 1 RERALSPDR-YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 59
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
A +F + G + DL + ++ ++ + + + ++ M+ A + +
Sbjct: 60 YSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYST 119
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ + + + + A+ V+ ++ C+ T +I+ Y ++G+ +A+K+F M++ G
Sbjct: 120 LLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 179
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------RAK 284
+ VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G +A
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239
Query: 285 NL------RQLEK----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
NL R +E Y+T+IS + + D + + R +G ID+ + M+ +
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 335 SK 336
+
Sbjct: 300 ER 301
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 150/333 (45%), Gaps = 30/333 (9%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK--LDLTPSSTHMYKILCDS 69
+M++AG+ ++ Y ++ + + + ++F E K LDLT + I+ D
Sbjct: 104 EMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCN-----IMIDV 158
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ G A E K F M++ GI + Y +L+ + A LF+ + K + ++
Sbjct: 159 YGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++++Y + EK +++ M+N + + I++ + K A +++
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L S G QV Y ++I AY R GL + A+++ E+++ +A + + G
Sbjct: 279 KLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIA----IHILAGAG 334
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
RI +A W++ +D G K++ E+ + S Y +++ V
Sbjct: 335 RIEEA---------------TWVFRQAIDA-GEVKDITVFERMIHLFSKY---KKYGNVV 375
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +++ R G D + +++ + KL + ++
Sbjct: 376 EVFDKMRGLGYFPDSNVIALILNAYGKLHEFDK 408
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 125/279 (44%), Gaps = 3/279 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L + +KM+ + D Y ++E K+ D K ++F ++ P Y
Sbjct: 27 AALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF--SRLKRSGFMPDLV-AYN 83
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ + GK+ E +M+ G+ + + Y++L+ + + A +F E E
Sbjct: 84 AMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREI 143
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
L DL ++ +Y + GM ++ ++ M+ + + ++ + + A
Sbjct: 144 KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEA 203
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ + + VTY S++ Y + + KA + EMQ +G + + YS+++++
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISI 263
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+GK G++ A L K++ G + + +Y +++ + RA
Sbjct: 264 WGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERA 302
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+H + M+ I + Y +M + K + EK L E ++R ++ P+S Y +
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE--PNSI-TYSTI 260
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK-G 125
GK G+ F+ ++ G+ D +Y ++I ++ V A+ L E +
Sbjct: 261 ISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ RD+ + + G +E+ V +A + +++ FSK + Y V
Sbjct: 321 IPRDIAIHI-----LAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVV 375
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+V++++ G P A I+NAY ++ + KA V++EMQ+ G
Sbjct: 376 EVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVG 420
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
++M+ +GI + Y+++I + + ++ A LF++ G+ D ++ +++ Y
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-RRAYWAAVKVYEQLISQGCIPG 199
G+V ++ +K + NI I+ I+ G + A W V+ Q I G +
Sbjct: 300 ERAGLVAHAKRLLHELKRPD-NIPRDIAIHILAGAGRIEEATW----VFRQAIDAGEVKD 354
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMRL 257
+ +I+ + + Y +VF +M+ G+ D V+A ++ YGK A +
Sbjct: 355 ITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIAL--ILNAYGKLHEFDKANDV 412
Query: 258 VAKMKPKGC 266
+M+ GC
Sbjct: 413 YMEMQEVGC 421
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M++ GI +S Y I+ + K+G ++ A LF + S +D+ +Y+ + +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV---LYQTMIVAY 299
Query: 71 GKSGRAFEILKFFRDMKEK-GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++G + ++K I D +++ A ++ A +F++A + G ++D
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIHI-----LAGAGRIEEATWVFRQAIDAGEVKD 354
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ VF +++ ++ + +EV + M+ + +I+N + K + A VY
Sbjct: 355 ITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYM 414
Query: 190 QLISQGCI 197
++ GC+
Sbjct: 415 EMQEVGCV 422
>gi|255660966|gb|ACU25652.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 376
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 111/223 (49%), Gaps = 2/223 (0%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S + I+ L +G+ E++ + MKE G +ED Y L+ F + + +
Sbjct: 58 SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVL 117
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ AE+KG + D + ++ +E +++ L V+ M + + + ++NG +
Sbjct: 118 EMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGA 177
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A++V+ ++ + C P +TY ++IN C+ ++ +A + E+ KG D V+ Y
Sbjct: 178 SKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITY 237
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
S ++ ++ A++L ++ KG +P+V ++N L +HG
Sbjct: 238 SMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNIL--IHG 278
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 123/268 (45%), Gaps = 19/268 (7%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ ++++ E + D VY +++ + +A++K EL++ +G R + F ++
Sbjct: 11 RVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSSFNIMMRGL 69
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G V++ + + E MK + + D I+ ++V+GF K ++ V E +G +
Sbjct: 70 FDNGKVDEVISIWELMKESGF-VEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLD 128
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
Y+++IN C+ +A V M + G V Y++++ + DA+R+
Sbjct: 129 AFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFR 188
Query: 260 KMKPKGCEPNVWIYNSLMD------MHGRAKNLRQ--LEK--------YTTVISAYNMAR 303
+M C P + YN+L++ M G A NL + L+K Y+ ++ +
Sbjct: 189 EMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDH 248
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
+ + ++ +N+ G D M I++
Sbjct: 249 KVERALQLWNQVISKGFKPDVQMHNILI 276
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 116/265 (43%), Gaps = 3/265 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E MK +G V DS Y ++ F K G +K + E + L + Y + +
Sbjct: 82 WELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFA---YSAMING 138
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K L M + G + VY +LI A ++ + A +F+E
Sbjct: 139 LCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPT 198
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + M + +V+ + + L+ +++ G A++++
Sbjct: 199 IITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWN 258
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+IS+G P + +I+ C +G A ++ +M + +V++++++ + K G
Sbjct: 259 QVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDG 318
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYN 274
IR+A+ + A++ G EP++ YN
Sbjct: 319 DIRNALMIWARILRNGLEPDIISYN 343
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ AE ++KE E + D V+ ++ Y ++ E+ E M +E N S
Sbjct: 4 GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWE-MMGSEGNRSVSSF 62
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ G + ++E + G + +TY +++ +C+ G K+ V +Q
Sbjct: 63 NIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KG AYS+M+ K + A+ ++ M GC+PNV +YN+L++
Sbjct: 123 KGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLIN 172
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 105/262 (40%), Gaps = 3/262 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH E + G VLD+ Y ++ K + ++ AL + K P+ H+Y L
Sbjct: 114 LHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDR--ALSVLNGMIKSGCKPN-VHVYNTL 170
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L + + + ++ FR+M Y +LI A L KE +KG+
Sbjct: 171 INGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGL 230
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + VE+ L++ + + + ++++G A+
Sbjct: 231 DPGVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALS 290
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+Y + C P V++ +++ + + G A ++ + + G + +++Y+ +
Sbjct: 291 LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLC 350
Query: 247 KTGRIRDAMRLVAKMKPKGCEP 268
RI DA+ + K P
Sbjct: 351 SCNRISDAILFLHDAVTKKIVP 372
>gi|326527817|dbj|BAJ88981.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 129/286 (45%), Gaps = 6/286 (2%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK GI LD+ Y ++ + G +K L +E + ++L +Y L D+ G
Sbjct: 182 EMKRWGIRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVEL---DVKIYNGLIDTFG 238
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ + K F M+ +GI D + +LI + +K A +E+GM D +
Sbjct: 239 KYGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPK 298
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+F+ ++ E+G ++ E+ + M+N S I V+V+ + + + A + L
Sbjct: 299 IFITIINKLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAAL 358
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
++ + + NAY + GL + V M+ +G + +V + ++ + GR
Sbjct: 359 KAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRH 418
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
+A + +K G P+V Y +LM R K + EK + V S
Sbjct: 419 LEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVK---RYEKVSEVYS 461
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 135/295 (45%), Gaps = 3/295 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L M++AG+ + Y +++ A + G + A L E R L L P + H Y L
Sbjct: 72 LQLLADMQAAGMRPSAAAYARLIRALARAG--RALEAEALLLEMRHLGLRPDAAH-YNAL 128
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L + M + G+ + Y L+ ++A ++ + + E + G+
Sbjct: 129 LEGLLARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRWGI 188
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + LV +Y + GM +K +++ M+ + + I +++ F K A K
Sbjct: 189 RLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARK 248
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++E++ QG P T+ ++I +CR+G +A + MQ++G + +++ G
Sbjct: 249 MFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINKLG 308
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ G+ + L KM+ +G + + IY L+D++G+ + R ++ + A N+
Sbjct: 309 EQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENL 363
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 125/282 (44%), Gaps = 36/282 (12%)
Query: 38 SEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
S+ +L L + + + PS+ Y L +L ++GRA E +M+ G+ D +
Sbjct: 66 SDLARSLQLLADMQAAGMRPSAA-AYARLIRALARAGRALEAEALLLEMRHLGLRPDAAH 124
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y +L+ + A +++A+ L + + G+ R+ ++ L+ Y G +E + V+ MK
Sbjct: 125 YNALLEGLLARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMK 184
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ + Y++++ Y G++
Sbjct: 185 RWGIRLD-----------------------------------TAGYSTLVRLYRDSGMWK 209
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
KA + +EMQ+ G + V Y+ ++ +GK G++ DA ++ KM+ +G +P++ +N+L+
Sbjct: 210 KATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMRGQGIKPDIETWNALI 269
Query: 278 DMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
H R N+++ ++ + M + + + N+ G
Sbjct: 270 RWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINKLGEQG 311
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 38/263 (14%)
Query: 63 YKILCDS---LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
Y L D +G+ G+ ++ ++M KGI + Y LI F V A +F
Sbjct: 193 YNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFG 252
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E + +G+ ++ + L+ +G V++ + + + M +++L + V++NGF K +
Sbjct: 253 EMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNK 312
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG-------LYS--------------- 217
A+ ++ + QG P +TY ++I+AYC+ G LY+
Sbjct: 313 TVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYN 372
Query: 218 -------------KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
A + EM K VV Y+ ++ K G R A++L+ +M K
Sbjct: 373 CLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEK 432
Query: 265 GCEPNVWIYNSLMDMHGRAKNLR 287
G P+ YN+LMD + R NLR
Sbjct: 433 GLNPSHVTYNTLMDGYCREGNLR 455
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + + +M+ G+ + Y ++ G ++ AL + S DL P+
Sbjct: 243 NVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSS--DLEPNVV- 299
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ +L + K+ E + F DM+++G+ + Y +LI ++ ++ A L+
Sbjct: 300 THNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMM 359
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
++G+ ++ + L+ +G V+ ++ M + +L+ ++++ K+
Sbjct: 360 IDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGES 419
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
AVK+ +++ +G P VTY ++++ YCR G A V M++KG VV ++ +
Sbjct: 420 RKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVL 479
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
+ + GR+ DA L+ +M +G PN Y
Sbjct: 480 IKGFCLKGRLEDANGLLNEMLERGLVPNRTTY 511
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR---AYWAAVKVYEQLISQGCIPGQ 200
G + + +V+E MK ++ + +++G+ K + A + ++++++G P +
Sbjct: 169 GKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNE 228
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
VTY +I+ +C+ S A +VF EMQ++G VV Y+ ++ G++ +A+ L +
Sbjct: 229 VTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQ 288
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQ-------LEK---------YTTVISAY 299
M EPNV +N L++ + K + + +EK YTT+I AY
Sbjct: 289 MVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAY 343
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 157/378 (41%), Gaps = 47/378 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M +G+ D Y ++EAF K+G+ ++ + + + ++ S ++ + +
Sbjct: 502 FEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQ---PSNRAFRPIIEG 558
Query: 70 LGKSG---RAFEILKFFR--------------------------------DMKEKGILED 94
+G RA IL R M GI +
Sbjct: 559 FAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPN 618
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y ++ +A+ ++ A E F + +E G+ D+ ++ L+ + G ++ L V
Sbjct: 619 EHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTR 678
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M ++ + + ++++G+++R W A + +Q+ G P TY S INA C+ G
Sbjct: 679 EMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAG 738
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A+KV EM G + Y++++ + K A++ +MK G +P+ Y+
Sbjct: 739 DMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYH 798
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV---------KFYNEFRMNGGVIDRA 325
L+ + + YT ++S E D+ V ++ ++ GG + A
Sbjct: 799 CLVTSLLSRATVMEGSTYTGILSICREMFENDLTVDMRTAVHWSRWLHKIERTGGALTEA 858
Query: 326 MAGIMVGVFSKLSQIEEL 343
+ I ++ L + E+
Sbjct: 859 LQRIFPPDWNSLEVLGEV 876
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 149/328 (45%), Gaps = 41/328 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M++ GI ++ + ++ A+ D V + E ++ ++LT + Y I+
Sbjct: 292 FENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVT---YSIIIAG 348
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K A F++ K K + +Y+++I + + AEEL +E EE G+
Sbjct: 349 FAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAP 408
Query: 130 LEVF----------------------LK-------------LVLMYIEEGMVEKTLEVVE 154
++ + LK L+ +YI+ G V K + + +
Sbjct: 409 IDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISK 468
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M++ + ++ ++++GF + A ++E+++ G P + Y +I A+C++G
Sbjct: 469 EMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMG 528
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A ++ +MQ++ A+ ++ + G ++ A+ ++ M+ GC P V YN
Sbjct: 529 NMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYN 588
Query: 275 SLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+L +HG K Q+E+ +V++ ++A
Sbjct: 589 AL--IHGLIKK-NQVERAVSVLNKMSIA 613
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 140/331 (42%), Gaps = 19/331 (5%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+S GI ++ Y ++ F + D ++F E K L P +Y +L ++
Sbjct: 468 KEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEM--LKSGLQPDRA-IYNLLIEAF 524
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G ++ M+++ + + +I FA ++K A + G +
Sbjct: 525 CKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTV 584
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ I++ VE+ + V+ M A + ++ +I+ G++ A + + +
Sbjct: 585 MTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTK 644
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G Y +++ A C+ G A V EM + + Y+ ++ + + G
Sbjct: 645 IKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGD 704
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
+ +A L+ +MK G PN+ Y S ++ +A ++++ +K YTT
Sbjct: 705 VWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTT 764
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRA 325
+I + A D +K + E ++ G D A
Sbjct: 765 LIKGWAKASLPDRALKSFEEMKLAGLKPDEA 795
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ GI Y +M + I D +K +F ++ TPS Y L +
Sbjct: 399 EMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERL--KECCFTPSIIS-YGCLINLYI 455
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ + + ++M+ GI + Y+ LI F + + A +F+E + G+ D
Sbjct: 456 KIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRA 515
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
++ L+ + + G +++ + ++E M+ + S+ I+ GF+ A+ + + +
Sbjct: 516 IYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLM 575
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
GC P +TY ++I+ + +A V +M G Y+ ++ Y G I
Sbjct: 576 RRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDI 635
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
A K+K G + +V+IY +L+
Sbjct: 636 GKAFEYFTKIKEGGLKLDVYIYETLL 661
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
F +++ Y + G E+M+ + + + +V+ ++ R + E++
Sbjct: 272 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMK 331
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
++G VTY+ II + +I A+ +F E + K D + YS+++ + ++G +
Sbjct: 332 AEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMD 391
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
A LV +M+ G + + Y+S+ MHG
Sbjct: 392 RAEELVREMEEDGIDAPIDAYHSM--MHG 418
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 56/117 (47%)
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
++KR A +E + ++G P + S+++AY EM+ +G +
Sbjct: 279 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELT 338
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+V YS ++A + K + A L + K K + N IY++++ H ++ N+ + E+
Sbjct: 339 IVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEE 395
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 109/214 (50%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y ++ + + + GR + ++F + + G + Y ++ + + AE+L E
Sbjct: 229 YNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMS 288
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+KG ++ F L+ G+VE +EV++ + + I++ F K++
Sbjct: 289 QKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMD 348
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ E ++S+GC P V+Y +++ A CR G A ++ +++ KG +++Y++++
Sbjct: 349 RAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVI 408
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
K G+ ++A+ L+ +M KG +P++ Y+++
Sbjct: 409 DGLTKAGKTKEALELLNEMVTKGLQPDIITYSTI 442
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 104/278 (37%), Gaps = 51/278 (18%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++ Y L L GR L DM +G + D Y L+ + + K A +L
Sbjct: 154 PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKL 213
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E KG D+ + V+VNG +
Sbjct: 214 LDEMRAKGCAPDIITY-----------------------------------NVVVNGICQ 238
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A++ + L S GC P V+Y ++ C + AEK+ EM QKG+ VV
Sbjct: 239 EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT 298
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ--------- 288
++ +++ + G + AM ++ ++ GC PN YN ++ + K + +
Sbjct: 299 FNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 358
Query: 289 -------LEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ Y T+++A E D V+ ++ + G
Sbjct: 359 SRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 396
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L +L + G ++ +K+KG Y ++I + K A EL E
Sbjct: 369 YNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMV 428
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + + E +E+ + +++ + + + I+ G KRR
Sbjct: 429 TKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETH 488
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
A+ ++ +IS GC+P + TY +I GL +A ++ E+ +G
Sbjct: 489 NAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG 536
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 99/236 (41%), Gaps = 3/236 (1%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + +L L + G ++ + + G + Y ++ +F ++ A
Sbjct: 293 PPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 352
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ +G D+ + L+ G V+ +E++ +K+ +++G +
Sbjct: 353 FVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 412
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A+++ +++++G P +TY++I + CR +A + F ++Q G V
Sbjct: 413 KAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTV 472
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
Y++++ K +A+ L M GC PN Y L++ G K R+L
Sbjct: 473 LYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEAREL 528
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 141 IEEGMVEKTLEVVESMKNAELNISD--CIS-----CVIVNGFSKRRAYWAA---VKVYEQ 190
+ G +E+ L +VESM E + + C + C RR A V Y
Sbjct: 70 VRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACEPDVMAYNA 129
Query: 191 LISQGCIPGQV-----------------TYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+++ C+ GQ+ TY ++I C G A V +M ++G
Sbjct: 130 MVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVP 189
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
VV Y+ ++ K + AM+L+ +M+ KGC P++ YN +++
Sbjct: 190 DVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVN 234
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 2/241 (0%)
Query: 37 DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
+SE F E L TH+ KI+ + LG++ + DM +KG+ D
Sbjct: 24 NSEHALQFFRWVERSNLFEHNRETHL-KII-EILGRASKLNHARCILLDMPKKGLEWDED 81
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
++ +I S+ V+ + +LF++ EE G+ R ++ + L + + G M
Sbjct: 82 MWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKM 141
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ + + V++ GF A + +E + S+ P +TY ++IN Y R+
Sbjct: 142 LSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKM 201
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+AEK F+EM+ K + VV Y++++ Y ++ DA+RLV +MK G +PN Y++L
Sbjct: 202 EEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTL 261
Query: 277 M 277
+
Sbjct: 262 L 262
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 88/205 (42%), Gaps = 1/205 (0%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ H + ++ SG+ +FF DMK + I D Y ++I + + +++ AE+
Sbjct: 148 PTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKY 207
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F E + K + + + L+ Y+ V+ L +VE MK + + ++ G
Sbjct: 208 FVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCN 267
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVT-YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
A + ++++ + P + + +I++ C+ G A V M +
Sbjct: 268 AEKMSEARSILKEMVDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKSMIRLSVPTEAG 327
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKM 261
Y ++ Y K G+ A++L+ K+
Sbjct: 328 HYGVLIENYCKAGQYDQAVKLLDKL 352
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 141/357 (39%), Gaps = 92/357 (25%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D P +T + + +L + GRA + L R M G + D +Y ++I + + V
Sbjct: 174 DRVPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAE 233
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A L E G D+ F +VL G V + +V+ M + C V+
Sbjct: 234 AATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMM-----MHGCTPSVVTY 288
Query: 174 GF------SKRRAYWA------------------------------AVKVYEQLIS---- 193
GF R+A A A ++YE + S
Sbjct: 289 GFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCP 348
Query: 194 -------------------------------QGCIPGQVTYASIINAYCRIGLYSKAEKV 222
+GC P VTY+++++++CR G++ A +
Sbjct: 349 PDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAM 408
Query: 223 FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM----- 277
+M KGF Y+ ++ GK G++ +AMRLV +MK +GC+P++ YN+++
Sbjct: 409 LDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCN 468
Query: 278 -DMHGRAKNL--RQLEK--------YTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
D A+++ LE+ Y T+I A + + ++ NE ++G +D
Sbjct: 469 NDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLD 525
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P H Y IL L K GR ++ +M+EKG + Y++L+ SF A
Sbjct: 348 PPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARA 407
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ + KG + + + ++ ++G +++ + +V+ MK+ C I+
Sbjct: 408 MLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLC 467
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
A ++ L+ +G + +TY ++I+A G + + ++ EM G VV
Sbjct: 468 NNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVV 527
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+Y+ ++ K G + +M L+ +M KG +PN + YN L++ +A +R
Sbjct: 528 SYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRD 579
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 123/261 (47%), Gaps = 7/261 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCD 68
++M + G ++S Y I+ A K G ++ L E +S+ K D+ +T +Y LC+
Sbjct: 410 DQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYH-LCN 468
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ + E F ++ E+G++ + Y +LI + + L E G
Sbjct: 469 N----DQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPL 524
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D+ + L+ +EG V++++ ++E M + ++ +++N K A+++
Sbjct: 525 DVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELS 584
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++++QG P VTY ++IN C++G A + ++ + +V Y+ +++ + K
Sbjct: 585 KEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKV 644
Query: 249 GRIRDAMRLVAKMKPKGCEPN 269
+ DA L+ K G PN
Sbjct: 645 RLLDDASMLLDKAVSGGIVPN 665
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 3/205 (1%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H + + G+V + Y ++ A G ++ L E L P Y L
Sbjct: 477 HIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANE---MVLHGCPLDVVSYNGLI 533
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+L K G + +M KGI + Y LI +V+ A EL KE +G+
Sbjct: 534 KALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLT 593
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D+ + L+ + G L ++E + N ++ ++++ K R A +
Sbjct: 594 PDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASML 653
Query: 188 YEQLISQGCIPGQVTYASIINAYCR 212
++ +S G +P + T+ ++ + R
Sbjct: 654 LDKAVSGGIVPNERTWGMMVQNFVR 678
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 129/265 (48%), Gaps = 5/265 (1%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELF 118
+++ L D+L K+G E F DM+ + +P++ + SL+ + ++ A+ +
Sbjct: 236 YVFGCLLDALCKNGSVKEAASLFEDMR---VRFNPNLRHFTSLLYGWCREGKIMEAKHVL 292
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ +E G D+ V+ L+ Y + G + +++ MK + +++ F K
Sbjct: 293 VQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKT 352
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A++++ ++ GC VTY ++I+ +C+ G KA ++ +M QKG D ++Y
Sbjct: 353 EKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSY 412
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
++ + K + + M L+ +M+ GC P++ IYN+++ + + +L++ + + A
Sbjct: 413 LCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQA 472
Query: 299 YNMAREFDMCVKFYNEFRMNGGVID 323
+ D + + F G +++
Sbjct: 473 GGLNPGLDTYILMVHGFLSQGCLVE 497
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 153/351 (43%), Gaps = 30/351 (8%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH---MYKILCDS 69
++ +G+++ SG +++ + GD+ + F S++ P H +YK + +
Sbjct: 121 LQESGVIMRSGLPERVLS---RCGDAGNLGYRFFVWASKQ----PGYRHSYEVYKAMIKT 173
Query: 70 LGKSGRAFEILKFFRDM-KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
LGK + + +M KE + P V+ L+ FAS+ VK A E+ E + G
Sbjct: 174 LGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEP 233
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D VF L+ + G V++ + E M+ N + ++ G+ + A V
Sbjct: 234 DEYVFGCLLDALCKNGSVKEAASLFEDMR-VRFNPNLRHFTSLLYGWCREGKIMEAKHVL 292
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
Q+ G P V Y +++ Y + G A + EM++ +++ ++ + KT
Sbjct: 293 VQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKT 352
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM-----------------DMHGRAKNLRQLEK 291
++ +AMR+ +M+ GCE +V Y +L+ DM + + QL
Sbjct: 353 EKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQL-S 411
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y ++ A+ E + C++ E R G V D + M+ + KL ++E
Sbjct: 412 YLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKE 462
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L ++G+ + +MK+ + + + LI SF ++ A +F E
Sbjct: 306 VYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEM 365
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G D+ + L+ + + G +K E+++ M + S I+ K+
Sbjct: 366 QGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEEL 425
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+++ E++ GC+P Y ++I C++G +A +++ EMQ G + + Y M
Sbjct: 426 EECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILM 485
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKG 265
V + G + +A +M +G
Sbjct: 486 VHGFLSQGCLVEACDYFKEMVERG 509
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 105/215 (48%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L + + K GR E ++F M G + + ++ S S AE+ E
Sbjct: 285 YNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMI 344
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + F L+ +G++ + ++V+E M + +++ K +
Sbjct: 345 RKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKME 404
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ + ++S+GC P VTY +++ A C+ G A ++ ++ KG ++ Y++++
Sbjct: 405 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVI 464
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G+ DA++L+ +MK KG +P++ Y++L+
Sbjct: 465 DGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLV 499
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 148/348 (42%), Gaps = 22/348 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E ++ +G V D Y ++ + K G+ L L+ S D+ +T + + LCDS
Sbjct: 169 EILEDSGAVPDVITYNVLISGYCKTGEIGSALQL-LDRMSVSPDVVTYNT-ILRTLCDS- 225
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK A E+L R M+ + D Y LI + + V A +L E +KG D+
Sbjct: 226 GKLKEAMEVLD--RQMQRE-CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDV 282
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ +EG +++ + + M + + +I+ + A K +
Sbjct: 283 VTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAE 342
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I +GC P VT+ +IN CR GL +A V +M Q G ++Y+ ++ K +
Sbjct: 343 MIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKK 402
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM----------------DMHGRAKNLRQLEKYTT 294
+ A+ + M +GC P++ YN+L+ + G L Y T
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNT 462
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
VI + + D +K +E + G D +VG S+ +++E
Sbjct: 463 VIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDE 510
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 5/209 (2%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L ++G E KF DM +G + D SLI + A + + E+ G + D
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY 188
+ + L+ Y + G + L++++ M + D ++ I+ A++V
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRMSVS----PDVVTYNTILRTLCDSGKLKEAMEVL 235
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++ + + C P +TY +I A C+ +A K+ EM+ KG VV Y+ ++ K
Sbjct: 236 DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKE 295
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
GR+ +A+R + M GC+PNV +N ++
Sbjct: 296 GRLDEAIRFLNHMPSYGCQPNVITHNIIL 324
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-IVNGFSK 177
+E E LR L + G +E+ + +E M +I D I+C ++ G K
Sbjct: 109 EEVENNNHLRRL----------VRNGELEEGFKFLEDMV-CRGDIPDIIACTSLIRGLCK 157
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
W A +V E L G +P +TY +I+ YC+ G A ++ M VV
Sbjct: 158 TGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVT 214
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y++++ +G++++AM ++ + + C P+V Y L++
Sbjct: 215 YNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIE 255
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 95/208 (45%), Gaps = 3/208 (1%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G GRA ++L+ M + G + Y L+ + +++ A E +G D+
Sbjct: 366 GLIGRAIDVLE---KMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDI 422
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ ++G V+ +E++ + + + +++G SK A+K+ ++
Sbjct: 423 VTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDE 482
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +G P +TY++++ R G +A F ++++ G + Y+S++ K +
Sbjct: 483 MKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQ 542
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A+ +A M +GC+P Y L++
Sbjct: 543 TVRAIDFLAYMVARGCKPTETSYMILIE 570
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 72/171 (42%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L +L K G+ ++ + KG Y ++I + + + A +L E +
Sbjct: 425 YNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMK 484
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG+ D+ + LV EG V++ + ++ + + I+ G K R
Sbjct: 485 GKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTV 544
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
A+ ++++GC P + +Y +I GL +A ++ E+ +G K
Sbjct: 545 RAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVK 595
>gi|413934891|gb|AFW69442.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
Length = 507
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 130/278 (46%), Gaps = 14/278 (5%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M+ GI LD+ Y ++ + G +K L +E + ++L +Y L D+ G
Sbjct: 183 EMRRWGIRLDTAGYSMLVRLYRDNGMWKKATDLVMEMQEVGVEL---DVKIYSGLIDTFG 239
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ + + F M+ +G+ D S + +LI + +K A F +E+GM D +
Sbjct: 240 KYGQLADARRMFDKMRAEGVRPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPK 299
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+F+ ++ E+G ++ ++ + M N S + ++V+ + + + A L
Sbjct: 300 IFVMIISRLGEQGKWDEIKKLFDGMNNRGFKESGAVYAILVDIYGQYGHFRDAQDCIAAL 359
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
++ + I NAY A+++ M+++GF+ +V +S++ +G GR
Sbjct: 360 RAENTQLLPRVFCVIANAY--------AQQL---MEEEGFEPNLVMLNSLINAFGTAGRH 408
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+A+ + +K G P+V Y +LM RAK ++
Sbjct: 409 LEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKV 446
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 130/288 (45%), Gaps = 3/288 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M+++G Y +++ A + G + A L E R+L P + H Y L + L
Sbjct: 79 MQASGGRPSGSAYARLIRALSRAG--RALEAEALLLEMRRLGPRPEAAH-YNALLEGLLA 135
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+ M + G+ + Y L+ ++A ++ + + E G+ D
Sbjct: 136 AAHLRLADLLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRWGIRLDTAG 195
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ LV +Y + GM +K ++V M+ + + I +++ F K A ++++++
Sbjct: 196 YSMLVRLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMR 255
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
++G P T+ ++I +CR+G +A + F MQ++G + +++ G+ G+
Sbjct: 256 AEGVRPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWD 315
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYN 300
+ +L M +G + + +Y L+D++G+ + R + + A N
Sbjct: 316 EIKKLFDGMNNRGFKESGAVYAILVDIYGQYGHFRDAQDCIAALRAEN 363
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%)
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y+ ++ Y G++ KA + +EMQ+ G + V YS ++ +GK G++ DA R+ KM+
Sbjct: 196 YSMLVRLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMR 255
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+G P++ +N+L+ H R N+++ ++ T + M
Sbjct: 256 AEGVRPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGM 294
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 138/295 (46%), Gaps = 23/295 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L + L K+G+ + + F +M+ KGI D Y +LI F+ + ++ A +F E
Sbjct: 598 YTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMV 657
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G+ ++ ++ L+ + G +EK E+++ M + C I++G+ K
Sbjct: 658 QAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLA 717
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++++ +G +P Y ++++ CR+ +A +F E +KG +++++
Sbjct: 718 EAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALI 776
Query: 243 AM---YGKTGRIRDAM-RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLEK 291
+GKT D + RL+ K +PN YN ++D + NL ++K
Sbjct: 777 NWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQK 836
Query: 292 ---------YTTVISAYN-MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
YT++++ Y+ M R +M ++E G D M +++ F K
Sbjct: 837 ANLMPTVITYTSLLNGYDKMGRRSEM-FSVFDEVIAAGIEPDNIMYSVIINAFLK 890
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 156/380 (41%), Gaps = 48/380 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSS-THMYKILCD 68
++ M + G+ + Y ++E F++ + K L +E + R + ++P + K +C
Sbjct: 373 FDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCS 432
Query: 69 S------------LGKSG-------------------RAFEILKFFRDMKEKGILEDPSV 97
S +G SG R + ++ ++M+E+GI D
Sbjct: 433 SGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFC 492
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y SLI + ++ A E E G D + + YIE G + V+ M
Sbjct: 493 YNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEML 552
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ + + ++N + K+ A + ++ QG + TY ++N + G +
Sbjct: 553 ECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVN 612
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
AE++F EM+ KG V +Y +++ + K G ++ A + +M G NV IYN L+
Sbjct: 613 DAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLL 672
Query: 278 DMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGV 321
R+ + + ++ Y T+I Y + + + ++E ++ G V
Sbjct: 673 GGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLV 732
Query: 322 IDRAMAGIMVGVFSKLSQIE 341
D + +V +L+ +E
Sbjct: 733 PDSFVYTTLVDGCCRLNDVE 752
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 13/299 (4%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N Q +++M AG+ + Y ++ F + G+ EK L E + P +
Sbjct: 645 NMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGF---PPNAV 701
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + D KSG E + F +MK KG++ D VY +L+ + +V+ A +F E
Sbjct: 702 TYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ET 760
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN----ISDCISCVIVNGFSK 177
EKG F L+ + G E T +++ + + + +D ++++ K
Sbjct: 761 NEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCK 820
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
AA +++ + +P +TY S++N Y ++G S+ VF E+ G + +
Sbjct: 821 EGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIM 880
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPK-----GCEPNVWIYNSLMDMHGRAKNLRQLEK 291
YS ++ + K G A+ L+ +M K GC+ ++ +L+ + + EK
Sbjct: 881 YSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 939
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 125/322 (38%), Gaps = 3/322 (0%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L + M G+V Y +++ K E +L +E S L +
Sbjct: 260 NVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGL---FADNV 316
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y IL D L K A +M G DP +Y IC + ++ A+ LF
Sbjct: 317 AYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGM 376
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
G+ + L+ + E V K E++ +K + IS V G
Sbjct: 377 ITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDL 436
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + +++ + GC P V Y ++I + + + A +V EM+++G Y+S+
Sbjct: 437 DGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSL 496
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ K ++ +A + +M G +P+ + Y + + + A +KY + +
Sbjct: 497 IIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGV 556
Query: 302 AREFDMCVKFYNEFRMNGGVID 323
+C NE+ G VI+
Sbjct: 557 IPNKVLCTGLINEYCKKGKVIE 578
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 44/247 (17%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE----CESR----------- 51
+++MK G+V DS Y +++ ++ D E+ +F C S
Sbjct: 720 FQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWV 779
Query: 52 -KLDLTPSSTHM-------------------YKILCDSLGKSGRAFEILKFFRDMKEKGI 91
K T +T M Y I+ D L K G + F M++ +
Sbjct: 780 FKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANL 839
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
+ Y SL+ + + +F E G+ D ++ ++ +++EGM K L
Sbjct: 840 MPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALV 899
Query: 152 VVESM--KNA-----ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ M KNA +L+IS C + +++GF+K A KV E ++ IP T
Sbjct: 900 LLDQMFAKNAVDDGCKLSISTCRA--LLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVI 957
Query: 205 SIINAYC 211
+IN C
Sbjct: 958 ELINESC 964
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 94/229 (41%), Gaps = 32/229 (13%)
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CV-IVNGFSKRRAYWAAVKVYE 189
+F L+ YIE+G +++ + V S K+ +L++ ++ C +++ KR VY+
Sbjct: 154 LFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYK 213
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + + +Y +I A+CR G A+ V ++ +++ + T
Sbjct: 214 GMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEE--------------LGTATL 259
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YT 293
+ +A+ L M KG P+ YN L+D + K L + Y+
Sbjct: 260 NVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYS 319
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+I R D +E +G ID M + V SK +E+
Sbjct: 320 ILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEK 368
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 140/326 (42%), Gaps = 19/326 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M++ G++ D Y ++ + K G+ ++ AL L + R+ L P+ Y I D
Sbjct: 333 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKE--ALLLFGDLRRAGLAPTVL-TYNIRIDG 389
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G E +M E+G L + Y L+ ++ + +A E F E KG+ D
Sbjct: 390 YCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPD 449
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + + G + + LE+ E + ++ ++++G K A ++
Sbjct: 450 CFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQM 509
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++S G P +TY +I+A+C GL +A K+F M G V ++ ++ Y + G
Sbjct: 510 KMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRG 569
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR--------QLEK--------YT 293
+ A KM +G EPN YN L+ R + LE+ YT
Sbjct: 570 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYT 629
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNG 319
+I ++ ++FY E NG
Sbjct: 630 LLIDGNCKVGNWEDAMRFYFEMHQNG 655
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 3/208 (1%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG RA E+ + + +GI D Y LI +K A+EL + G+ D
Sbjct: 463 LGDIARALELREV---LMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 519
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ + E G++ + ++ +M + L S VI++ + +R ++A +
Sbjct: 520 CITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFR 579
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ +G P ++TY +I+A CR+G A F EM ++G Y+ ++ K G
Sbjct: 580 KMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVG 639
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
DAMR +M G P+ + +L+
Sbjct: 640 NWEDAMRFYFEMHQNGIHPDYLTHKALV 667
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 129/301 (42%), Gaps = 19/301 (6%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +M S G+ D ++ A + + A+ E +L + PS Y L
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEE--MLQLGIEPSIV-TYNTL 210
Query: 67 CDSLGKSGRAFEILKFFRDMKEKG--ILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
DS K GR ++ ++M+ +G L + Y +I +++ A EL +
Sbjct: 211 LDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLS 270
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ L+ + G V+K ++ M+N + + +++G + AA
Sbjct: 271 KKASSF-TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAA 329
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ + G +P +TY S++N YC+ G +A +F ++++ G V+ Y+ +
Sbjct: 330 QVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDG 389
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
Y + G + +A L +M +GC PNV Y LM K + + + MARE
Sbjct: 390 YCRLGDLEEARILKEEMGEQGCLPNVCTYTILM-------------KGSLNVCSLAMARE 436
Query: 305 F 305
F
Sbjct: 437 F 437
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 138/358 (38%), Gaps = 71/358 (19%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E+M GI Y ++++F K G +KVA L E E+R P+ Y ++
Sbjct: 192 HEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDV-TYNVVITG 250
Query: 70 LGKSG---RAFEILKFFR-------------------------------DMKEKGILEDP 95
L + G A E+++ R +M+ +GI+
Sbjct: 251 LTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTV 310
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
Y ++I V+ A+ F E G+L D+ + L+ Y + G +++ L +
Sbjct: 311 VTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGD 370
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
++ A L + + ++G+ + A + E++ QGC+P TY ++ +
Sbjct: 371 LRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCS 430
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVA-------------------------------- 243
+ A + F EM KG AY++ +
Sbjct: 431 LAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNI 490
Query: 244 -MYG--KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-YTTVIS 297
++G KTG ++DA L KM G +P+ Y L+ H LR+ K + +IS
Sbjct: 491 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMIS 548
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 5/269 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE-CESRKLDLTPSSTHMYKILCDSLG 71
M+S I D Y ++ K E+ LF E CE + L P+ + L D
Sbjct: 287 MESERISPDVFTYSALINGLCKESRVEEANGLFDEMCE---MGLVPNGV-TFTTLIDGQC 342
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ L+ F MK++GI D Y +LI ++K A +L E G D
Sbjct: 343 KHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKI 402
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F L+ ++G ++ LE+ + M + + D +++G + A ++ + +
Sbjct: 403 TFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDM 462
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+S G P TY +I+ +C+ G K+ EMQ+ G VV Y++++ + K G++
Sbjct: 463 LSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQM 522
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
++A L+ M PN +N L+D H
Sbjct: 523 KNAKMLLHAMLNMEVVPNDITFNILLDGH 551
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 98/207 (47%), Gaps = 3/207 (1%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G +E F+ ++ + G + ++ L+ F I +V A +F E +G+ +
Sbjct: 206 QPGHCWE---FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVV 262
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F L+ Y VE+ + M++ ++ ++NG K A +++++
Sbjct: 263 SFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEM 322
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
G +P VT+ ++I+ C+ G A + F M+ +G ++ Y++++ + G +
Sbjct: 323 CEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDL 382
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++A +L+ +M G +P+ + +LMD
Sbjct: 383 KEARKLLNEMIGNGFKPDKITFTTLMD 409
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 120/302 (39%), Gaps = 16/302 (5%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + +++ IL K G F ++ +G+ + +LI + V+
Sbjct: 223 PPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFV 282
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L E + + D+ + L+ +E VE+ + + M L + +++G
Sbjct: 283 LKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQC 342
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A++ +E + +G P +TY ++IN CR G +A K+ EM GF +
Sbjct: 343 KHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKI 402
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----- 291
+++++ K G + A+ + +M +G E + + +L+ R +R E+
Sbjct: 403 TFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDM 462
Query: 292 -----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQI 340
YT VI + + M K E + +G V ++ F K Q+
Sbjct: 463 LSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQM 522
Query: 341 EE 342
+
Sbjct: 523 KN 524
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 106/253 (41%), Gaps = 10/253 (3%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +E MK GI D Y ++ + GD ++ L E P + L
Sbjct: 351 LRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGF--KPDKI-TFTTL 407
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D K G L+ M E+GI D + +LI V+ AE + K+ G
Sbjct: 408 MDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGH 467
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + ++ + ++G V+ ++++ M+ ++NGF K+ A
Sbjct: 468 KPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKM 527
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ +++ +P +T+ +++ +C+ G S K+F +KG V Y+S A+
Sbjct: 528 LLHAMLNMEVVPNDITFNILLDGHCKHG-SSVDFKIF--NGEKGL---VSDYASYTALVN 581
Query: 247 KTGRI-RDAMRLV 258
++ +I +D ++ V
Sbjct: 582 ESIKISKDQLKSV 594
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 158/379 (41%), Gaps = 54/379 (14%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
L++++K+ + G LD Y ++ K+G++ L + + + L MY
Sbjct: 157 HQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQL---DVVMY 213
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ DS+ K + + +M + I + Y++LI F + ++K A LF +
Sbjct: 214 STIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTS 273
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA--------------------ELNI 163
+ + D+ F LV + +EG V++ + M E+N+
Sbjct: 274 ENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNM 333
Query: 164 SDCI---------------SCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
+ I +++NGF K + A+K+++++ + P +TY S+I+
Sbjct: 334 AKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID 393
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
C+ G S A ++ M +G ++ YSS++ K + A+ L+ K+K +G P
Sbjct: 394 GLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRP 453
Query: 269 NVWIYNSLMD---MHGRAKNLRQL-------------EKYTTVISAYNMAREFDMCVKFY 312
N++ Y L+D GR ++ R + YT +I + FD +
Sbjct: 454 NMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLL 513
Query: 313 NEFRMNGGVIDRAMAGIMV 331
++ + N + D I++
Sbjct: 514 SKMKDNSCIPDAITYEIII 532
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/341 (17%), Positives = 125/341 (36%), Gaps = 55/341 (16%)
Query: 57 PSSTHMYKI----LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVK 112
P +TH Y I + + + + F + + + ++ S
Sbjct: 28 PENTHFYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYH 87
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
LF++ E +G+ + F L+ + + G++ V+ + +
Sbjct: 88 TVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFI 147
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG------------------ 214
GF + A+ +++L++ G QV+Y ++IN C++G
Sbjct: 148 KGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQ 207
Query: 215 ----LYS-------------KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
+YS A ++ EM + +V YS++++ + G+++DA+ L
Sbjct: 208 LDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGL 267
Query: 258 VAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQ-------------LEKYTTVISAYNM 301
KM + P+V+ +N L+D GR K + + Y +++ Y +
Sbjct: 268 FNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCL 327
Query: 302 AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
E +M N G I++ F K+ +++
Sbjct: 328 VNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQ 368
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 28/263 (10%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
K+K GI + Y +++ K G E +F + + +LT ++ Y ++
Sbjct: 445 KLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNT---YTVMIQGFC 501
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
G E L MK+ + D Y +ICS E AE+L +E +G+L
Sbjct: 502 SHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYS-- 559
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
++E G + A +D + C S+ WA K+ +
Sbjct: 560 --------FLEYGSWSLSFMAAP----AHFLNNDSLQCTS----SQESGNWA--KLLLER 601
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
I C+ + + +YS + ++G+ V Y+ M+ + G
Sbjct: 602 IYCDCVLTKSNMRDKDVECPSVIIYSTC-----DWSKQGYILDVNTYTVMIQGFCSHGLF 656
Query: 252 RDAMRLVAKMKPKGCEPNVWIYN 274
+++ L++KM+ GC P+ Y+
Sbjct: 657 DESLALLSKMEVNGCIPDAVTYD 679
>gi|326487288|dbj|BAJ89628.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 461
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 123/273 (45%), Gaps = 3/273 (1%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK GI LD+ Y ++ + G +K L +E + ++L +Y L D+ G
Sbjct: 182 EMKRWGIRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVEL---DVKIYNGLIDTFG 238
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G+ + K F M+ +GI D + +LI + +K A +E+GM D +
Sbjct: 239 KYGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPK 298
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+F+ ++ E+G ++ E+ + M+N S I V+V+ + + + A + L
Sbjct: 299 IFITIINRLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAAL 358
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
++ + + NAY + GL + V M+ +G + +V + ++ + GR
Sbjct: 359 KAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRH 418
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+A + +K G P+V Y +LM R K
Sbjct: 419 LEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVK 451
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 135/295 (45%), Gaps = 3/295 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L M++AG+ + Y +++ A + G + A L E R L L P + H Y L
Sbjct: 72 LQLLADMQAAGMRPSAAAYARLIRALARAG--RALEAEALLLEMRHLGLRPDAAH-YNAL 128
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L + M + G+ + Y L+ ++A ++ + + E + G+
Sbjct: 129 LEGLLARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRWGI 188
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + LV +Y + GM +K +++ M+ + + I +++ F K A K
Sbjct: 189 RLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARK 248
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++E++ QG P T+ ++I +CR+G +A + MQ++G + +++ G
Sbjct: 249 MFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINRLG 308
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+ G+ + L KM+ +G + + IY L+D++G+ + R ++ + A N+
Sbjct: 309 EQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENL 363
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 124/282 (43%), Gaps = 36/282 (12%)
Query: 38 SEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
S+ +L L + + + PS+ Y L +L ++GRA E +M+ G+ D +
Sbjct: 66 SDLARSLQLLADMQAAGMRPSAA-AYARLIRALARAGRALEAEALLLEMRHLGLRPDAAH 124
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
Y +L+ + A +++A+ L + + G+ R+ ++ L+ Y G +E + V+ MK
Sbjct: 125 YNALLEGLLARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMK 184
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ + Y++++ Y G++
Sbjct: 185 RWGIRLD-----------------------------------TAGYSTLVRLYRDSGMWK 209
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
KA + +EMQ+ G + V Y+ ++ +GK G++ DA ++ KM+ +G +P++ +N+L+
Sbjct: 210 KATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMRGQGIKPDIETWNALI 269
Query: 278 DMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
H R N+++ ++ + M + + + N G
Sbjct: 270 RWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINRLGEQG 311
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+EKM+ GI D + ++ ++G+ ++ + + P ++ + +
Sbjct: 250 FEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPK---IFITIINR 306
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LG+ G+ E+ + F M+ +G E ++YA L+ + + A+E + + +
Sbjct: 307 LGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLS 366
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+F L Y ++G+ E+T+ V++ M+ + + + +++N FS + A V++
Sbjct: 367 PSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQ 426
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI 224
+ G P VTY +++ A+ R+ Y K +++
Sbjct: 427 HIKDSGMSPDVVTYTTLMKAFMRVKRYEKVRLLYL 461
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 138/321 (42%), Gaps = 25/321 (7%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD---LTPSSTHMYKILCDS 69
M+ GI D Y ++ A + G ++ +F R ++ + P T Y L ++
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVF-----RTMNEGGILPDIT-TYSYLVET 54
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
GK R ++ + ++M+ G D + Y L+ + A +K A +F++ + G + +
Sbjct: 55 FGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPN 114
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ L+ +Y G + ++ MK + + +++N F + + V ++
Sbjct: 115 AATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFH 174
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ + P TY +I A + GL+ A+K+ + M +KG AY+ ++ YG+
Sbjct: 175 DMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAA 234
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH----------------GRAKNLRQLEKYT 293
+A+ M G +P V YNSL+ M G++ R + +
Sbjct: 235 LYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFN 294
Query: 294 TVISAYNMAREFDMCVKFYNE 314
VI A+ +F+ +K Y E
Sbjct: 295 GVIEAFRQGGQFEEAIKAYVE 315
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 122/287 (42%), Gaps = 38/287 (13%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M+ AG V ++ Y ++ + + G + V LFLE K+ T + Y IL +
Sbjct: 103 FRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEM---KVSNTEPNAATYNILINV 159
Query: 70 LGKSGRAFEILKFFRDM-----------------------------------KEKGILED 94
G+ G E++ F DM EKG++
Sbjct: 160 FGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPS 219
Query: 95 PSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVE 154
Y +I ++ A + A F E G +E + L+ M+ + G+ +++ ++
Sbjct: 220 SKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILL 279
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
M + + + ++ F + + A+K Y ++ C P + T ++++ YC G
Sbjct: 280 KMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAG 339
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
L ++E+ F E++ G V+ Y M+A+Y K R DA +L+ +M
Sbjct: 340 LVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEM 386
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 116/259 (44%), Gaps = 3/259 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M+S G D Y ++EA + G ++ +F + + P++ Y IL +
Sbjct: 69 KEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQG--AGCVPNAA-TYSILLNLY 125
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G+ GR ++ F +MK + + Y LI F K LF + E+ + ++
Sbjct: 126 GRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNM 185
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
E + L+ + G+ E +++ M + S ++ + + Y A+ +
Sbjct: 186 ETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNT 245
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ G P TY S+I + + GLY ++E + ++M Q G + ++ ++ + + G+
Sbjct: 246 MNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQ 305
Query: 251 IRDAMRLVAKMKPKGCEPN 269
+A++ +M+ C+P+
Sbjct: 306 FEEAIKAYVEMEKARCDPD 324
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 89/221 (40%), Gaps = 39/221 (17%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM +G+ + + ++EAF + G E+ ++E E + D P + +L
Sbjct: 280 KMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCD--PDEQTLEAVL----- 332
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
SVY FA + V+ +EE F E + G+L +
Sbjct: 333 ------------------------SVYC-----FAGL--VEESEEQFGEIKALGILPSVM 361
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ ++ +Y + + ++++ M N NI I +I + + V+E+
Sbjct: 362 CYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEK 421
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
L S+GC G Y +++ A +G +A +V E ++G
Sbjct: 422 LKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGL 462
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 106/223 (47%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ + Y IL G + L F +M+ G L + Y +LI ++ + + A L
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
K KGM +L + ++ EG +++ E++E M + ++NG+ K
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A+ ++ +++ G P VTY ++IN+ C+ ++A + F +M+ +G
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
Y++++ + + G + +A R++ +M G P+V YN+ + H
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGH 230
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 153/357 (42%), Gaps = 23/357 (6%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q L + +M+ G + + Y +++A+ K+G ++ L S+ + S Y
Sbjct: 27 QKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLIS---Y 83
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ + L + G E + +M KG D Y +L+ + A + E
Sbjct: 84 NVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVR 143
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G+ + + L+ + + + +E + M+ L ++ +++GFS++
Sbjct: 144 NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNE 203
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ ++ G P VTY + I+ +C + +A V EM +KG VV+YS++++
Sbjct: 204 AYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIIS 263
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------- 290
+ + G + A ++ +M KG P+ Y+SL + G + R E
Sbjct: 264 GFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL--IQGLCEMRRLTEACDLSQEMLDMGL 321
Query: 291 -----KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
YTT+I+AY + + + + ++E G + D +++ +K ++ E
Sbjct: 322 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTRE 378
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 118/277 (42%), Gaps = 3/277 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L + +M G+ Y ++ + K + + F + R L +
Sbjct: 130 NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLR---PNER 186
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y L D + G E + +M E G Y + I + ++ A + +E
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
EKG+ D+ + ++ + +G +++ ++ + M ++ ++ G + R
Sbjct: 247 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 306
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + ++++ G P + TY ++INAYC G +KA + EM KGF V YS +
Sbjct: 307 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVL 366
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ K R R+A RL+ K+ + P+ Y++L++
Sbjct: 367 INGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 403
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 127/282 (45%), Gaps = 5/282 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M G D Y ++ + K G+ + AL + E + ++PS Y L +S+
Sbjct: 104 EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ--ALVIHAEMVRNGVSPSVV-TYTALINSM 160
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K+ ++FF M+ +G+ + Y +LI F+ + A + E E G +
Sbjct: 161 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 220
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
+ + + +E+ L VV+ M L D +S I++GF ++ A ++ +
Sbjct: 221 VTYNAFIHGHCVLERMEEALGVVQEMVEKGL-APDVVSYSTIISGFCRKGELDRAFQMKQ 279
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ +G P VTY+S+I C + ++A + EM G Y++++ Y G
Sbjct: 280 EMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG 339
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
+ A+ L +M KG P+ Y+ L++ + R+ ++
Sbjct: 340 DLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 381
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
G+ RAF++ + +M EKG+ D Y+SLI + + A +L +E + G+ D
Sbjct: 269 GELDRAFQMKQ---EMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 325
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
+ L+ Y EG + K L + + M + + D ++ V++NG +K+ A ++
Sbjct: 326 FTYTTLINAYCVEGDLNKALHLHDEMIHKGF-LPDAVTYSVLINGLNKQARTREAKRLLF 384
Query: 190 QLISQGCIPGQVTY---------------ASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
+LI + +P VTY ++I +C GL +A++VF M ++
Sbjct: 385 KLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPG 444
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
Y+ ++ + + G + A L +M G P+
Sbjct: 445 EAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHT 480
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 16/138 (11%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P TY +I +C +G K F EM++ G VV Y++++ Y K GRI +A L
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----LEK------------YTTVISAYNM 301
+ M KG +PN+ YN +++ R ++++ LE+ Y T+++ Y
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 302 AREFDMCVKFYNEFRMNG 319
F + + E NG
Sbjct: 128 EGNFHQALVIHAEMVRNG 145
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 26/265 (9%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ L ++M G+ D Y I+ F + G+ ++ A ++ E + ++P + Y
Sbjct: 237 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDR--AFQMKQEMVEKGVSPDAV-TY 293
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L L + R E ++M + G+ D Y +LI ++ ++ A L E
Sbjct: 294 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 353
Query: 124 KGMLRDLEVFLKLV------------------LMYIEEGMVEKTLE-VVESMKNAELNIS 164
KG L D + L+ L+Y E + T + ++E+ N E
Sbjct: 354 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV 413
Query: 165 DCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFI 224
++ GF + A +V+E ++ + PG+ Y II+ +CR G KA ++
Sbjct: 414 ----VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYK 469
Query: 225 EMQQKGFDKCVVAYSSMVAMYGKTG 249
EM GF V +++ K G
Sbjct: 470 EMIHSGFVPHTVTVITLIKALFKEG 494
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 27/202 (13%)
Query: 48 CESRKL----DLT--------PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDP 95
CE R+L DL+ P Y L ++ G + L +M KG L D
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360
Query: 96 SVYASLICSFASIAEVKVAEEL-FKEAEEKGMLRDL----------EVFLKLVLMYIE-- 142
Y+ LI A + A+ L FK E+ + D+ + K V+ I+
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGF 420
Query: 143 --EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+G++ + V ESM + + VI++G + A +Y+++I G +P
Sbjct: 421 CMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHT 480
Query: 201 VTYASIINAYCRIGLYSKAEKV 222
VT ++I A + G+ + +V
Sbjct: 481 VTVITLIKALFKEGMNEEMSEV 502
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 117/256 (45%), Gaps = 3/256 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ F K G E+ + E + L L Y L +L K + + L F
Sbjct: 427 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG---YNCLISALCKDEKVQDALNMFG 483
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
DM KG D + SLI + + + A L+++ +G++ + + L+ ++ G
Sbjct: 484 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 543
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ L++V M + D ++ + + ++E ++S+G P ++
Sbjct: 544 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 603
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+IN CR G A + +M +G +V Y+S++ KTGR ++A+ L K++ +
Sbjct: 604 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 663
Query: 265 GCEPNVWIYNSLMDMH 280
G P+ YN+L+ H
Sbjct: 664 GICPDAITYNTLISWH 679
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL D K GR E +M KG+ + Y LI + +V+ A +F +
Sbjct: 427 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 486
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
KG D+ F L+ + E+ L + + M E I++ I+ +++ F +R A
Sbjct: 487 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML-LEGVIANTITYNTLIHAFLRRGAM 545
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+K+ ++ +GC +TY +I A CR G K +F +M KG + ++ + +
Sbjct: 546 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 605
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAK 284
+ +TG I+ A+ + M +G P++ YNSL++ GRA+
Sbjct: 606 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 651
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 126/262 (48%), Gaps = 9/262 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCD 68
++M G+ L++ Y ++ A K + +F + S+ K D+ ++ ++
Sbjct: 448 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF----- 502
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K + E L ++DM +G++ + Y +LI +F ++ A +L + +G
Sbjct: 503 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 562
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKV 187
D + L+ G +EK L + E M + LN ++ ISC +++NG + A++
Sbjct: 563 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN-ISCNILINGLCRTGNIQHALEF 621
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+I +G P VTY S+IN C+ G +A +F ++Q +G + Y+++++ + K
Sbjct: 622 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 681
Query: 248 TGRIRDAMRLVAKMKPKGCEPN 269
G DA L+++ G PN
Sbjct: 682 EGMFDDAHLLLSRGVDSGFIPN 703
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 124/280 (44%), Gaps = 10/280 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS-STHMYKILCDS 69
++M G +S Y +M ++G ++ L L+ P+ + ++ L +
Sbjct: 311 DRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML--------LNKVPNPNVVLFNTLING 362
Query: 70 LGKSGRAFEILKFFRD-MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
GR E + M G D Y +LI + A EL E + KG
Sbjct: 363 YVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEP 422
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + L+ + +EG +E+ V++ M L ++ +++ K A+ ++
Sbjct: 423 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 482
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ S+GC P T+ S+I C++ + +A ++ +M +G + Y++++ + +
Sbjct: 483 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 542
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G +++A++LV M +GC + YN L+ RA N+ +
Sbjct: 543 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK 582
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 3/246 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q L+ + M S G D + ++ K+ E+ L+ + L+ ++T Y
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY---QDMLLEGVIANTITY 532
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + + G E LK DM +G D Y LI + ++ LF++
Sbjct: 533 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 592
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ + L+ G ++ LE + M + L ++NG K
Sbjct: 593 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 652
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ ++++L +G P +TY ++I+ +C+ G++ A + GF V + +V+
Sbjct: 653 ALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 712
Query: 244 MYGKTG 249
+ K G
Sbjct: 713 NFIKEG 718
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 122/306 (39%), Gaps = 48/306 (15%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK GIV + IM+ + + G + L L+ R + + Y ++ D L
Sbjct: 136 QMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLD--MRGVYSCEPTFRSYNVVLDVLL 193
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVY--ASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ F +M KGI P+VY ++ + + EV A L K+ G + +
Sbjct: 194 AGNCPKVVPNVFYEMLSKGI--SPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPN 251
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSKRRAYWAA 184
V+ L+ + G V + L+++E M + CI V ++G K A
Sbjct: 252 AIVYQTLIHALXKVGRVNEVLKLLEEML-----LMGCIPDVNTFNDAIHGLCKMLRIHEA 306
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK--------------- 229
K+ ++++ +G P TY +++ CR+G +A + ++
Sbjct: 307 AKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSR 366
Query: 230 -----------------GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
G + Y++++ K G + A L+ +M+ KGCEPNV
Sbjct: 367 GRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVIT 426
Query: 273 YNSLMD 278
Y L+D
Sbjct: 427 YTILID 432
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+KG VY LI + E K + L + +++G++ +F+ ++ Y G+
Sbjct: 104 QKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPG 163
Query: 148 KTLEVVESMKNAELNISDCISC--------VIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ ++ M+ SC V+++ V+ +++S+G P
Sbjct: 164 QATRLLLDMRGV-------YSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPT 216
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
T+ ++ A C + A + +M + G + Y +++ K GR+ + ++L+
Sbjct: 217 VYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLE 276
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+M GC P+V +N +HG K LR
Sbjct: 277 EMLLMGCIPDVNTFND--AIHGLCKMLR 302
>gi|255661196|gb|ACU25767.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 426
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 23/259 (8%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+ F +K GI D VY S+I F + A L E G++ D + L+ M
Sbjct: 64 ISIFSRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTM 123
Query: 140 YIEEGMVEKTLEVVESMKNAE--LNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
Y+E + L V M+ + L+++ C ++++ + + A K++ + G
Sbjct: 124 YVENKKFIEALSVFAEMREIKCLLDLTTC--NIMIDVYGQLGMAKEADKLFWSMRKLGVE 181
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P V+Y +++ Y L+ +A +F MQ+K ++ VV Y+SM+ +YGKT A L
Sbjct: 182 PNVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNL 241
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
+ +M+ +G EPN Y+T+IS + + D + + R
Sbjct: 242 IQEMQSRGIEPNAI-------------------TYSTIISIWGKVGKLDRAAMLFEKLRS 282
Query: 318 NGGVIDRAMAGIMVGVFSK 336
+G ID+ + M+ + +
Sbjct: 283 SGIEIDQVLYQTMIVAYER 301
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 153/335 (45%), Gaps = 34/335 (10%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK----LDLTPSSTHMYKILC 67
+M++ G++ D+ Y ++ + + + + + AL + E R+ LDLT + I+
Sbjct: 104 EMRTXGVMPDTVSYTTLLTMY--VENKKFIEALSVFAEMREIKCLLDLTTCN-----IMI 156
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D G+ G A E K F M++ G+ + Y +L+ ++ A LF+ + K +
Sbjct: 157 DVYGQLGMAKEADKLFWSMRKLGVEPNVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIE 216
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+++ + ++++Y + EK +++ M++ + + I++ + K A +
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAML 276
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+E+L S G QV Y ++I AY R GL S A+++ E++ + + + +
Sbjct: 277 FEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELKTPD----NIPRDTAIQILAG 332
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDM 307
+GR+ +A W++ +D G K++ E+ + S Y R++
Sbjct: 333 SGRMEEA---------------TWVFRQAIDA-GEVKDITVFEQMIDLFSKY---RKYSN 373
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
V+ +++ R G D + +++ + KL E+
Sbjct: 374 VVEVFDKMRGLGYFPDSNVIALVLNAYGKLHDFEK 408
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 9/224 (4%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
H + M+ I + Y +M + K + EK L E +SR ++ P++ Y +
Sbjct: 205 HLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIE--PNAI-TYSTII 261
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE-EKGM 126
GK G+ F ++ GI D +Y ++I ++ V A+ L E + +
Sbjct: 262 SIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELKTPDNI 321
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
RD + + G +E+ V +A + +++ FSK R Y V+
Sbjct: 322 PRD-----TAIQILAGSGRMEEATWVFRQAIDAGEVKDITVFEQMIDLFSKYRKYSNVVE 376
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
V++++ G P A ++NAY ++ + KA V++EMQ +G
Sbjct: 377 VFDKMRGLGYFPDSNVIALVLNAYGKLHDFEKANDVYLEMQDEG 420
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 87/189 (46%), Gaps = 10/189 (5%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
++M+ +GI + Y+++I + + ++ A LF++ G+ D ++ +++ Y
Sbjct: 240 NLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAY 299
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-RRAYWAAVKVYEQLISQGCIPG 199
G+V ++ +K + NI + I+ G + A W V+ Q I G +
Sbjct: 300 ERAGLVSHAKRLLHELKTPD-NIPRDTAIQILAGSGRMEEATW----VFRQAIDAGEVKD 354
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMRL 257
+ +I+ + + YS +VF +M+ G+ D V+A ++ YGK A +
Sbjct: 355 ITVFEQMIDLFSKYRKYSNVVEVFDKMRGLGYFPDSNVIAL--VLNAYGKLHDFEKANDV 412
Query: 258 VAKMKPKGC 266
+M+ +GC
Sbjct: 413 YLEMQDEGC 421
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 2/240 (0%)
Query: 38 SEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
SE F E L TH+ KI+ + LG++ + DM +KG+ D +
Sbjct: 17 SEHAFHFFRWVERSNLFEHNRETHL-KII-EILGRASKLNHARCILLDMPKKGLEWDEDM 74
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ +I S+ V+ + ++F++ EE G+ R ++ + L + + G M
Sbjct: 75 WVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMGKRYFNKML 134
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ + + V++ GF A++ +E + S+ P VTY ++IN Y R+
Sbjct: 135 SEGIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKME 194
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+AEK F+EM+ + + VV Y++++ Y ++ DA+RLV +MK G +PN Y++L+
Sbjct: 195 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLL 254
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 124/283 (43%), Gaps = 13/283 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
++ + ++E MKS I D Y ++ +Y++ E+ F+E + R ++ T + Y
Sbjct: 159 ETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVT---Y 215
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + + L+ +MK G + Y++L+ + ++ A + KE +
Sbjct: 216 TTLIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLLPGLCNAEKMSEARVILKEMMD 275
Query: 124 KGML-RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
K + D +F++L+ + + G ++ +V+++M + +++ F K Y
Sbjct: 276 KYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYD 335
Query: 183 AAVKVYEQLISQGCI--PGQV------TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
AVK+ ++LI + + P + +I C G SKAE + ++ + G
Sbjct: 336 KAVKLLDKLIEKDIMLRPQSTLHLEPSAHNPMIEYLCNNGQASKAETLVRQLMKLGVQDP 395
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
A ++++ + + G A L+ M + + YNSL+
Sbjct: 396 -TALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLV 437
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 65/133 (48%)
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
++++ + K +VK+++++ G +Y ++ R G Y ++ F +M
Sbjct: 76 VMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMGKRYFNKMLS 135
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+G + ++ M+ + +G++ A+R MK + P+V YN++++ + R K + +
Sbjct: 136 EGIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKMEE 195
Query: 289 LEKYTTVISAYNM 301
EKY + N+
Sbjct: 196 AEKYFVEMKGRNI 208
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 127/279 (45%), Gaps = 7/279 (2%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTH 61
Q + YEKM S I+ +S + I+ + G + F L + LD+
Sbjct: 473 QQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDII----- 527
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y I+ D K G E +K ++ + EKGI + SL+ F ++ A L
Sbjct: 528 LYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTI 587
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G+ + + L+ +Y EEG ++ LE++ MK + + V++ G K+
Sbjct: 588 KLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKL 647
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ ++ E + + G P QV+Y +II A+C+ KA +++ +M + V Y+ +
Sbjct: 648 QESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNIL 707
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH 280
+ + G ++DA L+ ++ + N + Y +++ H
Sbjct: 708 INGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAH 746
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 140/303 (46%), Gaps = 21/303 (6%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
+IG+ E+ L+ E S L+ S+ +L SL KS + K F +M+ G+
Sbjct: 398 QIGNVEEALKLYKEMISHGFQLSIISS---TVLLGSLCKSRQVDVAFKLFCEMEANGLRP 454
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D Y++LI EV+ A L+++ ++ + + +++ E+G + +
Sbjct: 455 DLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYF 514
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ + + L++ + ++++G+ KR AVK+Y+QL +G P VT+ S++ +C
Sbjct: 515 DYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCIN 574
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
S+A ++ ++ G + V Y++++ +Y + G ++ + L+++MK K P Y
Sbjct: 575 RKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITY 634
Query: 274 NSLM-----------------DMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFR 316
++ DM Q+ Y T+I A+ AR+ + Y++
Sbjct: 635 TVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVS-YNTIIQAFCKARDMRKAFQLYDKML 693
Query: 317 MNG 319
++
Sbjct: 694 LHN 696
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 6/235 (2%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIA 109
K+ TP S + I+ D L + R + + FF+D + K PSV + +++ + +
Sbjct: 238 KVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEF--QPSVVSFNTIMSRYCKLG 295
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
V VA+ F + G+L D + L+ G + + L++ M+N L
Sbjct: 296 FVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYN 355
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++ GF A + ++++ +G P VTY +I +C+IG +A K++ EM
Sbjct: 356 ILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISH 415
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
GF +++ + ++ K+ ++ A +L +M+ G P++ Y++L +HG K
Sbjct: 416 GFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTL--IHGLCK 468
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 38/285 (13%)
Query: 28 IMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMK 87
IM + K+G + + F C K L P + + Y IL L +G E L DM+
Sbjct: 287 IMSRYCKLGFVDVAKSFF--CMMLKHGLLPDA-YSYNILIHGLCIAGSMGEALDLKNDME 343
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
G+ D Y L F + + A + ++ KG +L + L+ + + G VE
Sbjct: 344 NHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVE 403
Query: 148 KTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ L++ + M + +S S V++ K R A K++ ++ + G P +TY+++I
Sbjct: 404 EALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLI 463
Query: 208 NAYCRIG-------LYSK--------------------AEKVFIEMQQKGFDKC------ 234
+ C+ G LY K EK I + FD
Sbjct: 464 HGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLS 523
Query: 235 --VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ Y+ M+ Y K G R+A++L ++ KG P + +NSLM
Sbjct: 524 LDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLM 568
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 85/194 (43%), Gaps = 16/194 (8%)
Query: 164 SDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVF 223
S+ S ++V+G ++ + AV ++ + P V++ +I++ YC++G A+ F
Sbjct: 245 SEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFF 304
Query: 224 IEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN------SLM 277
M + G +Y+ ++ G + +A+ L M+ G EP++ YN L+
Sbjct: 305 CMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLL 364
Query: 278 DMHGRAKNLRQ----------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
+ A N+ Q L YT +I + + +K Y E +G + +
Sbjct: 365 GLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISS 424
Query: 328 GIMVGVFSKLSQIE 341
+++G K Q++
Sbjct: 425 TVLLGSLCKSRQVD 438
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 16/168 (9%)
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G +P +Y +I+ C G +A + +M+ G + +V Y+ + + G
Sbjct: 307 MLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGL 366
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY----------------TT 294
I A ++ KM KG PN+ Y L+ H + N+ + K T
Sbjct: 367 INGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTV 426
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++ + +R+ D+ K + E NG D ++ K ++++
Sbjct: 427 LLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQ 474
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++T + I+ +S+ K GR + KF +M G D Y +++ A+EL
Sbjct: 315 TNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKEL 374
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
KE + F + + ++G++E+ + ++E M+ + +VNGF
Sbjct: 375 LKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCV 434
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ +A++++ S C P +TY +++ C A ++ EM + VV
Sbjct: 435 QGHIDSALELFR---SMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVT 491
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +V + + G + +A+ LV +M GC PN+ YN+L D
Sbjct: 492 FNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFD 532
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 114/254 (44%), Gaps = 3/254 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++EA K E+ A+ E R TP+ Y ++ + + + GR +
Sbjct: 180 YTVLLEAMCKNSGFEQAMAVLDE--MRAKGCTPNIV-TYNVIINGMCREGRVDDARDLLN 236
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+ G D Y +L+ + EELF E EK + + F L+ + G
Sbjct: 237 RLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGG 296
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
MVE+ ++V++ M E + + +++N K+ A K + S GC P ++Y
Sbjct: 297 MVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYT 356
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+++ CR ++ A+++ EM + V +++ + + + G I A+ L+ +M+
Sbjct: 357 TVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEH 416
Query: 265 GCEPNVWIYNSLMD 278
GC V YN+L++
Sbjct: 417 GCTVGVVTYNALVN 430
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 129/292 (44%), Gaps = 22/292 (7%)
Query: 42 AALFLECESRKLDLTPSSTHMYKILC-DSLGKSGRAFEILKFFRDMKEKGILEDPSVY-- 98
AA ES + P+S + +++ + L + R E L RD E P VY
Sbjct: 26 AAAATRPESPNVAPNPASARLRRLIAREDLAGAARLVE-LSASRDG------EAPDVYLC 78
Query: 99 ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
LI + A + + AE G D+ + LV Y G ++ ++ SM
Sbjct: 79 TKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPV 138
Query: 159 AELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
A D + ++ R A+ + + ++ +GC P VTY ++ A C+ +
Sbjct: 139 A----PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFE 194
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+A V EM+ KG +V Y+ ++ + GR+ DA L+ ++ GC+P+ Y +L+
Sbjct: 195 QAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLL 254
Query: 278 DMHGRAKNLRQLEK-YTTVISAYNMARE--FDMCVKFYNEFRMNGGVIDRAM 326
+K +E+ + ++ M E FDM ++F+ GG+++RA+
Sbjct: 255 KGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF----CRGGMVERAI 302
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 99/255 (38%), Gaps = 3/255 (1%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+L + GR + + R + G D Y +L+ + + A L +
Sbjct: 84 NLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAP 140
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ + + G V L +++ M + V++ K + A+ V
Sbjct: 141 DAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVL 200
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ ++GC P VTY IIN CR G A + + G V+Y++++ +
Sbjct: 201 DEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCAS 260
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
R D L A+M K C PN ++ L+ R + + + ++ + A +C
Sbjct: 261 KRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLC 320
Query: 309 VKFYNEFRMNGGVID 323
N G V D
Sbjct: 321 NIVINSICKQGRVDD 335
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 102/236 (43%), Gaps = 3/236 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + G L+ FR M K + Y +L+ + + A EL E
Sbjct: 425 YNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEML 481
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ ++ F LV + ++G +++ +E+VE M + + +G +K +
Sbjct: 482 HRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSE 541
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+++ L+S+G P +T++SII + +A ++F Q G + Y+ ++
Sbjct: 542 DALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKIL 601
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
K I +A+ +A M GC PN Y L++ R L++ + +++ +
Sbjct: 602 LGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCS 657
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 91/213 (42%), Gaps = 7/213 (3%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
ILC + G + + M+E G Y +L+ F + A ELF+ K
Sbjct: 396 ILC----QKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK 451
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ + L+ ++ E+V M + + + V+VN F ++ A
Sbjct: 452 P---NTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEA 508
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++ EQ++ GC P +TY ++ + + A ++ + KG V+ +SS++ +
Sbjct: 509 IELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGI 568
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K R+ +A+++ + G P +YN ++
Sbjct: 569 LSKEDRVEEAIQMFHLAQDIGMRPKALVYNKIL 601
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 72/174 (41%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + +L + + G E ++ M E G + Y +L + A E
Sbjct: 486 PPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALE 545
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L KG+ D+ F ++ + +E VE+ +++ ++ + + I+ G
Sbjct: 546 LLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLC 605
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
KR A+ ++S GC+P + TY +I R GL +A+ + + +G
Sbjct: 606 KRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRG 659
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 117/256 (45%), Gaps = 3/256 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ F K G E+ + E + L L Y L +L K + + L F
Sbjct: 445 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG---YNCLISALCKDEKVQDALNMFG 501
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
DM KG D + SLI + + + A L+++ +G++ + + L+ ++ G
Sbjct: 502 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 561
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ L++V M + D ++ + + ++E ++S+G P ++
Sbjct: 562 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 621
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+IN CR G A + +M +G +V Y+S++ KTGR ++A+ L K++ +
Sbjct: 622 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 681
Query: 265 GCEPNVWIYNSLMDMH 280
G P+ YN+L+ H
Sbjct: 682 GICPDAITYNTLISWH 697
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL D K GR E +M KG+ + Y LI + +V+ A +F +
Sbjct: 445 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 504
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
KG D+ F L+ + E+ L + + M E I++ I+ +++ F +R A
Sbjct: 505 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML-LEGVIANTITYNTLIHAFLRRGAM 563
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+K+ ++ +GC +TY +I A CR G K +F +M KG + ++ + +
Sbjct: 564 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 623
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAK 284
+ +TG I+ A+ + M +G P++ YNSL++ GRA+
Sbjct: 624 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 669
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 126/262 (48%), Gaps = 9/262 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESR--KLDLTPSSTHMYKILCD 68
++M G+ L++ Y ++ A K + +F + S+ K D+ ++ ++
Sbjct: 466 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF----- 520
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K + E L ++DM +G++ + Y +LI +F ++ A +L + +G
Sbjct: 521 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 580
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKV 187
D + L+ G +EK L + E M + LN ++ ISC +++NG + A++
Sbjct: 581 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN-ISCNILINGLCRTGNIQHALEF 639
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+I +G P VTY S+IN C+ G +A +F ++Q +G + Y+++++ + K
Sbjct: 640 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 699
Query: 248 TGRIRDAMRLVAKMKPKGCEPN 269
G DA L+++ G PN
Sbjct: 700 EGMFDDAHLLLSRGVDSGFIPN 721
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 124/280 (44%), Gaps = 10/280 (3%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS-STHMYKILCDS 69
++M G +S Y +M ++G ++ L L+ P+ + ++ L +
Sbjct: 329 DRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML--------LNKVPNPNVVLFNTLING 380
Query: 70 LGKSGRAFEILKFFRD-MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
GR E + M G D Y +LI + A EL E + KG
Sbjct: 381 YVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEP 440
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + L+ + +EG +E+ V++ M L ++ +++ K A+ ++
Sbjct: 441 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 500
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ S+GC P T+ S+I C++ + +A ++ +M +G + Y++++ + +
Sbjct: 501 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 560
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G +++A++LV M +GC + YN L+ RA N+ +
Sbjct: 561 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK 600
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 3/246 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q L+ + M S G D + ++ K+ E+ L+ + L+ ++T Y
Sbjct: 494 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY---QDMLLEGVIANTITY 550
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + + G E LK DM +G D Y LI + ++ LF++
Sbjct: 551 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 610
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG+ + L+ G ++ LE + M + L ++NG K
Sbjct: 611 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 670
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ ++++L +G P +TY ++I+ +C+ G++ A + GF V + +V+
Sbjct: 671 ALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 730
Query: 244 MYGKTG 249
+ K G
Sbjct: 731 NFIKEG 736
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 122/306 (39%), Gaps = 48/306 (15%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK GIV + IM+ + + G + L L+ R + + Y ++ D L
Sbjct: 154 QMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLD--MRGVYSCEPTFRSYNVVLDVLL 211
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVY--ASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ F +M KGI P+VY ++ + + EV A L K+ G + +
Sbjct: 212 AGNCPKVVPNVFYEMLSKGI--SPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPN 269
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-----IVNGFSKRRAYWAA 184
V+ L+ + G V + L+++E M + CI V ++G K A
Sbjct: 270 AIVYQTLIHALSKVGRVNEVLKLLEEML-----LMGCIPDVNTFNDAIHGLCKMLRIHEA 324
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK--------------- 229
K+ ++++ +G P TY +++ CR+G +A + ++
Sbjct: 325 AKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSR 384
Query: 230 -----------------GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWI 272
G + Y++++ K G + A L+ +M+ KGCEPNV
Sbjct: 385 GRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVIT 444
Query: 273 YNSLMD 278
Y L+D
Sbjct: 445 YTILID 450
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 88 EKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVE 147
+KG VY LI + E K + L + +++G++ +F+ ++ Y G+
Sbjct: 122 QKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPG 181
Query: 148 KTLEVVESMKNAELNISDCISC--------VIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ ++ M+ SC V+++ V+ +++S+G P
Sbjct: 182 QATRLLLDMRGV-------YSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPT 234
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
T+ ++ A C + A + +M + G + Y +++ K GR+ + ++L+
Sbjct: 235 VYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLE 294
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+M GC P+V +N +HG K LR
Sbjct: 295 EMLLMGCIPDVNTFND--AIHGLCKMLR 320
>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 376
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 131/272 (48%), Gaps = 6/272 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M + + D+ Y ++ F ++G + L+ E RK S + I+
Sbjct: 13 YMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLW-ELMGRKGSQNVVS---FNIMMRG 68
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L +G + + + MK+ G +ED Y +I F + + + + AE KG + D
Sbjct: 69 LFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLD 128
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ +E ++K + V+ M + + + ++NGF + A++V+
Sbjct: 129 AFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFR 188
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ S C P VTY ++IN C+ +S+A + EM +KG+ CV+ YS ++ +
Sbjct: 189 EMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGH 248
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ A++L ++ KG +P+V ++N L +HG
Sbjct: 249 KVEMALQLWNQVLSKGFKPDVQMHNIL--IHG 278
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 113/265 (42%), Gaps = 3/265 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E MK +G V DS Y I++ F K G K + E + L + Y + +
Sbjct: 82 WELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFA---YSAMING 138
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K + + + M + G + VY +LI F ++ A +F+E
Sbjct: 139 LCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPT 198
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + ++V+ M +++ G + A++++
Sbjct: 199 IVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWN 258
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q++S+G P + +I+ C +G A ++ +M +V +++++ + K G
Sbjct: 259 QVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDG 318
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYN 274
IR+A+ + A++ G +P++ YN
Sbjct: 319 DIRNALVIWARILRSGLQPDIISYN 343
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 138/343 (40%), Gaps = 54/343 (15%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRA 76
GI+LD+ Y +++ +G ++V L + +D + + IL D+L K GR
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD---PDDYTFNILIDALCKEGRI 281
Query: 77 FEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKL 136
E M ++G D Y +L+ + S V A ELF ++G+ D
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD------- 334
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
VL Y V+++G+ K + A+ ++++L ++
Sbjct: 335 VLNY----------------------------NVLIDGYCKTKMVDEAMVLFKELCNKNL 366
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
+P +Y S+I+ C G S +K+ EM VV Y+ ++ K GRI +A+
Sbjct: 367 VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALG 426
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR----------------QLEKYTTVISAYN 300
++ M KG +PN+ YN++MD + N+ + Y +I+ Y
Sbjct: 427 VLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYC 486
Query: 301 MAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEEL 343
D + + E R + D A ++ L +I +
Sbjct: 487 KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHV 529
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 111/266 (41%), Gaps = 11/266 (4%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D K+ E + F+++ K ++ + Y SLI + + ++L E
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
D+ + L+ +EG + + L V+ M + + +++G+ R
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVN 457
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ +++ G P + Y +IN YC+ + +A +F EM+ K + +Y+S++
Sbjct: 458 VAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
GRI L+ +M G P+V YN L+D + + + IS +
Sbjct: 518 DGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKT------QPFDKAISLFRQI 571
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAG 328
E + +F N ++D G
Sbjct: 572 VE-----GIWPDFYTNHAIVDNLCKG 592
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + L K+G+ L ++M++ + + +Y++LI V A L +
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G+L D + L+ G ++ +++ M ++ D ++++ K
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A V + +G P VTY +++ YC +A ++F M ++G + V+ Y+ ++
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
Y KT + +AM L ++ K P + YNSL+D GR ++++L
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 3/197 (1%)
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
SV+ L+ + + A LF + + KG+ + F L+ Y + ++ +
Sbjct: 56 SVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLAT 115
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
+ + + I+NGF + A+ + L++QG + Q TY ++IN + G
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQ 175
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
A + EM++ +V YS+++ K G + DA+ L +++ +G + YNS
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNS 235
Query: 276 LMD---MHGRAKNLRQL 289
L+D GR + + QL
Sbjct: 236 LIDGCCSVGRWQEVTQL 252
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 121/262 (46%), Gaps = 3/262 (1%)
Query: 27 QIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDM 86
+++ A ++G +LF + +S+ + +PS ++ +S AF +
Sbjct: 60 KLLGAIVRMGHYPTAISLFTQLQSKGI--SPSIATFTILINCYFHQSHTAFA-FSLLATI 116
Query: 87 KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMV 146
+ G + + ++I F + A + + +G L D + L+ + G +
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176
Query: 147 EKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASI 206
+ L +++ M+ + + + + +++G K A+ + Q+ +G + VTY S+
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL 236
Query: 207 INAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
I+ C +G + + ++ +M ++ D ++ ++ K GRI +A ++A M +G
Sbjct: 237 IDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE 296
Query: 267 EPNVWIYNSLMDMHGRAKNLRQ 288
+P++ YN+LM+ + +N+ +
Sbjct: 297 KPDIVTYNALMEGYCSRENVHE 318
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 103/253 (40%), Gaps = 38/253 (15%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y IL D+L K GR E L M +KG+ + Y +++ + V VA++
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-------- 168
+F + G+ D+ + L+ Y + MV++ + + + M++ L I D S
Sbjct: 462 IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL-IPDIASYNSLIDGL 520
Query: 169 ----------------C------------VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
C ++++ F K + + A+ ++ Q++ +G P
Sbjct: 521 CNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDF 579
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
T +I++ C+ AE + G V Y+ ++ K G +AM L++K
Sbjct: 580 YTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSK 639
Query: 261 MKPKGCEPNVWIY 273
M+ P+ +
Sbjct: 640 MEDNDRPPDAITF 652
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 86/204 (42%), Gaps = 3/204 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L + K+ E + F++M+ K ++ D + Y SLI ++ + +EL E
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDC-ISCVIVNGFSKRRAY 181
+ G D+ + L+ + + +K + + + E D + IV+ K
Sbjct: 538 DSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI--VEGIWPDFYTNHAIVDNLCKGEKL 595
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + L+ GC P TY +INA C+ G + +A + +M+ + + +
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKG 265
+ + + A +L +M +G
Sbjct: 656 IGVLLQRNETDKAEKLREEMIARG 679
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 45/95 (47%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV + +++ P + ++ A R+G Y A +F ++Q KG + ++ ++
Sbjct: 39 AVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILIN 98
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y A L+A + G +PN+ +N++++
Sbjct: 99 CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIIN 133
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 3/236 (1%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P+ + Y IL SLG+ R E F +M+E+G Y ++I + ++ A
Sbjct: 116 PADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMV 175
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ K+ +K + D L+ G E E+ E MK + + ++ +++
Sbjct: 176 VLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCG 235
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A + +++ ++G P +T+ ++IN R S+A KV EM+ G V
Sbjct: 236 KAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVF 295
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQL 289
Y+ M+ + K G + A + M+ GC NV YN L+D GR ++ R +
Sbjct: 296 TYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDI 351
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 123/276 (44%), Gaps = 5/276 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLT-PSSTHMYKILCD 68
+ MKS G D Y ++ + + E+ LF E E R + P+ T++ I C
Sbjct: 107 FASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYC- 165
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K+GR + + M +K + D SLI + + ++A E+F+ ++ G+
Sbjct: 166 ---KAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAV 222
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ F ++ + G V + ++ M+ + + ++N + + A KV
Sbjct: 223 NTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVL 282
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ S G P TY +I A+ + G KA ++F +M++ G VV Y+ ++ K
Sbjct: 283 QEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKA 342
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
GR +DA + MK KG P+ L + G+ K
Sbjct: 343 GRYQDARDIYFDMKKKGILPDAITATVLQQLAGKCK 378
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 89/186 (47%)
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
V ++I ++ + + + F+E ++ G + + ++ ++ G V +E+++ M
Sbjct: 16 VSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKM 75
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
L + V+++G K A K++ + S GC TYA +I + R
Sbjct: 76 IKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRD 135
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+A +F EM+++G AY++++ +Y K GRI AM ++ KM K P+ + NSL
Sbjct: 136 EEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSL 195
Query: 277 MDMHGR 282
+ R
Sbjct: 196 ITAVSR 201
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 51/100 (51%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+++ +++I G P + +++ + + +A K+F M+ G Y+ ++
Sbjct: 68 AMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIR 127
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
G+ R +A L +M+ +GC P+ Y +++D++ +A
Sbjct: 128 SLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKA 167
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 52/118 (44%)
Query: 167 ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM 226
+S ++ + + + +++L G P TY +I + + G A ++ +M
Sbjct: 16 VSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKM 75
Query: 227 QQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
+ G + + + ++ GK + +A +L A MK GC + + Y L+ GR K
Sbjct: 76 IKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCK 133
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 129/265 (48%), Gaps = 5/265 (1%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV--YASLICSFASIAEVKVAEELF 118
+++ L D+L K+G E F DM+ + +P++ + SL+ + ++ A+ +
Sbjct: 213 YVFGCLLDALCKNGSVKEAASLFEDMR---VRFNPNLRHFTSLLYGWCREGKIMEAKHVL 269
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ +E G D+ V+ L+ Y + G + +++ MK + +++ F K
Sbjct: 270 VQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKT 329
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A++++ ++ GC VTY ++I+ +C+ G KA ++ +M QKG D ++Y
Sbjct: 330 EKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSY 389
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
++ + K + + M L+ +M+ GC P++ IYN+++ + + +L++ + + A
Sbjct: 390 LCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQA 449
Query: 299 YNMAREFDMCVKFYNEFRMNGGVID 323
+ D + + F G +++
Sbjct: 450 GGLNPGLDTYILMVHGFLSQGCLVE 474
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 153/351 (43%), Gaps = 30/351 (8%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH---MYKILCDS 69
++ +G+++ SG +++ + GD+ + F S++ P H +YK + +
Sbjct: 98 LQESGVIMRSGLPERVLS---RCGDAGNLGYRFFVWASKQ----PGYRHSYEVYKAMIKT 150
Query: 70 LGKSGRAFEILKFFRDM-KEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
LGK + + +M KE + P V+ L+ FAS+ VK A E+ E + G
Sbjct: 151 LGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEP 210
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D VF L+ + G V++ + E M+ N + ++ G+ + A V
Sbjct: 211 DEYVFGCLLDALCKNGSVKEAASLFEDMR-VRFNPNLRHFTSLLYGWCREGKIMEAKHVL 269
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
Q+ G P V Y +++ Y + G A + EM++ +++ ++ + KT
Sbjct: 270 VQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKT 329
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM-----------------DMHGRAKNLRQLEK 291
++ +AMR+ +M+ GCE +V Y +L+ DM + + QL
Sbjct: 330 EKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLS- 388
Query: 292 YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y ++ A+ E + C++ E R G V D + M+ + KL ++E
Sbjct: 389 YLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKE 439
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L ++G+ + +MK+ + + + LI SF ++ A +F E
Sbjct: 283 VYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEM 342
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G D+ + L+ + + G +K E+++ M + S I+ K+
Sbjct: 343 QGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEEL 402
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+++ E++ GC+P Y ++I C++G +A +++ EMQ G + + Y M
Sbjct: 403 EECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILM 462
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKG 265
V + G + +A +M +G
Sbjct: 463 VHGFLSQGCLVEACDYFKEMVERG 486
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 3/259 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ A G E+ L + S K D + Y IL +L + G+ E + +
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCD---PNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
MKEKG+ D Y LI +F + VA E + G L D+ + ++ + G
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ LE+ + + + + + A+ + +++S G P ++TY
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+I+ CR G+ +A ++ ++M+ F VV Y+ ++ + K RI DA+ ++ M
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 265 GCEPNVWIYNSLMDMHGRA 283
GC PN Y L++ G A
Sbjct: 538 GCRPNETTYTVLIEGIGFA 556
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 2/218 (0%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T M KI S +SG E L M KG D + LI F ++ + A + +
Sbjct: 90 TQMLKIFHRSC-RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME 148
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E+ G D+ + L+ + + ++ V++ M++ + + +++ R
Sbjct: 149 ILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+KV QL+S C P +TY +I A G +A K+ EM +G + Y+
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+++ K G + A +V ++ KGCEP+V YN L+
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 112/271 (41%), Gaps = 4/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH E M G D ++++ F+ + + K + E Y L
Sbjct: 109 LHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK----FGQPDVFAYNAL 164
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ K R + + M+ K D Y +I S S ++ +A ++ +
Sbjct: 165 INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + EG V++ L++++ M + L I+ G K A +
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ L +GC P ++Y ++ A G + + EK+ +M + D VV YS ++
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G+I +AM L+ MK KG P+ + Y+ L+
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G+ D+ Y ++ AF + G + VA FLE + D Y + +L K
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLD-VAIEFLE--TMISDGCLPDIVNYNTVLATLCK 415
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G+A + L+ F + E G + S Y ++ + S + A + E G+ D
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEIT 475
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ EGMV++ E++ M++ E + S +++ GF K A+ V E ++
Sbjct: 476 YNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Query: 193 SQGCIPGQVTYASII 207
GC P + TY +I
Sbjct: 536 GNGCRPNETTYTVLI 550
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL ++ G E LK +M +G+ D Y ++I V A E+ + E
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 290
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG D+ + L+ + +G E+ +++ M + + + + +++ +
Sbjct: 291 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ + + + +G P +Y +I A+CR G A + M G +V Y++++
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A K G+ A+ + K+ GC PN YN++
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-IVNGFSKRRAYWAAV 185
RD ++ LK+ G ++L ++E+M N D I C ++ GF R AV
Sbjct: 87 FRDTQM-LKIFHRSCRSGNYIESLHLLETMVRKGYN-PDVILCTKLIKGFFTLRNIPKAV 144
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+V E L G P Y ++IN +C++ A +V M+ K F V Y+ M+
Sbjct: 145 RVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSL 203
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G++ A++++ ++ C+P V Y L++
Sbjct: 204 CSRGKLDLALKVLNQLLSDNCQPTVITYTILIE 236
>gi|255660972|gb|ACU25655.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 376
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S + I+ L +G+ E++ + MKE G +ED Y L+ F + + +
Sbjct: 58 SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVL 117
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ AE+KG + D + ++ +E +++ + V+ M + + + ++NG
Sbjct: 118 EMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGA 177
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A++V+ ++ + C P +TY ++IN C+ ++ +A + E+ KG D V+ Y
Sbjct: 178 SKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITY 237
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
S ++ R+ A+ L ++ KG +P+V ++N L +HG
Sbjct: 238 SMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNIL--IHG 278
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 121/268 (45%), Gaps = 19/268 (7%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ ++++ E + D VY +++ + +A++K EL++ +G R + F ++
Sbjct: 11 RVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSSFNIMMRGL 69
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G V++ + + E MK + + D I+ ++V+GF K ++ V E +G +
Sbjct: 70 FDNGKVDEVISIWELMKESGF-VEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLD 128
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
Y+++IN C+ +A V M + G V Y++++ + DA+R+
Sbjct: 129 AFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFR 188
Query: 260 KMKPKGCEPNVWIYNSLMD------MHGRAKNLRQ--LEK--------YTTVISAYNMAR 303
+M C P + YN+L++ M G A NL + L+K Y+ ++ +
Sbjct: 189 EMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDH 248
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
+ + +N+ G D M I++
Sbjct: 249 RVERALXLWNQVTSKGFKPDVQMHNILI 276
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ AE ++KE E + D V+ ++ Y ++ E+ E M +E N S
Sbjct: 4 GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWE-MMGSEGNRSVSSF 62
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ G + ++E + G + +TY +++ +C+ G K+ V +Q
Sbjct: 63 NIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KG AYS+M+ K + A+ ++ M GC+PNV +YN+L++
Sbjct: 123 KGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLIN 172
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 100/249 (40%), Gaps = 3/249 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH E + G VLD+ Y ++ K + ++ ++ K P+ H+Y L
Sbjct: 114 LHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVL--NGMIKSGCKPN-VHVYNTL 170
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L + + + ++ FR+M Y +LI A L KE +KG+
Sbjct: 171 INGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGL 230
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + VE+ L + + + + ++++G A+
Sbjct: 231 DPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALS 290
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+Y + C P V++ +++ + + G A ++ + + G + +++Y+ +
Sbjct: 291 LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLC 350
Query: 247 KTGRIRDAM 255
RI DA+
Sbjct: 351 SCNRISDAI 359
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 125/273 (45%), Gaps = 9/273 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFL---ECESRKLDLTPSST 60
Q +H+++K+ + G ++ Y ++ KIG++ + A FL E S L++
Sbjct: 139 QKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGET-RCAIKFLRMIEDSSTGLNVV---- 193
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
MY + D L K E F+ +M +GI + Y +LI F ++ A L E
Sbjct: 194 -MYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNE 252
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
K + ++ + L+ +EG V++ ++ M +++GF K +
Sbjct: 253 MILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQN 312
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A ++ ++ G P + TY ++I+ C+ G A+K+F ++ KG V Y+
Sbjct: 313 LDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNV 372
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
M+ K G + +A+ + +KM+ GC PNV +
Sbjct: 373 MIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTF 405
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 16/189 (8%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
I++G K + A Y ++ ++G P +TY ++I +C G + A + EM K
Sbjct: 197 TIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILK 256
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQL 289
+ V Y+ ++ K G++++A L+A+M +G +V Y SL+D + +NL +
Sbjct: 257 NINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKA 316
Query: 290 E----------------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGV 333
YT +I K + + + G ID +M+G
Sbjct: 317 TALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGG 376
Query: 334 FSKLSQIEE 342
K ++E
Sbjct: 377 LCKEGMLDE 385
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 3/223 (1%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+Y +M + GI + Y ++ F G +L E + ++ + + Y IL D
Sbjct: 214 FYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNIN---PNVYTYAILID 270
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+L K G+ E +M +G D Y SL+ F + A LF + +E G+
Sbjct: 271 ALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQP 330
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ + G ++ ++ + + I C V++ G K A+ +
Sbjct: 331 NKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIK 390
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ GCIP VT+ II + + KAEK+ EM KG
Sbjct: 391 SKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+ M+ KGI + LI F + ++ + + + + G + L+ +
Sbjct: 76 KQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLK 135
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G V+K++ + + ++ ++NG K A+K + V Y
Sbjct: 136 GEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMY 195
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+II+ C+ L ++A + EM +G V+ Y++++ + G++ A L+ +M
Sbjct: 196 NTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMIL 255
Query: 264 KGCEPNVWIYNSLMDM---HGRAKNLRQL 289
K PNV+ Y L+D G+ K + L
Sbjct: 256 KNINPNVYTYAILIDALCKEGKVKEAKNL 284
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 26/196 (13%)
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
I+ +K + Y A+ + +Q+ +G P VT +IN +C +G S + V ++ + G
Sbjct: 58 ILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLG 117
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------MHGRA 283
+ + ++++ G ++ ++ K+ +G + N Y +L++
Sbjct: 118 YQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAI 177
Query: 284 KNLRQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNG---GVIDRA------ 325
K LR +E Y T+I + + FY+E G VI
Sbjct: 178 KFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGF 237
Query: 326 -MAGIMVGVFSKLSQI 340
+AG + G FS L+++
Sbjct: 238 CLAGQLTGAFSLLNEM 253
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 133/272 (48%), Gaps = 6/272 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M + I D+ Y ++ F+K G + L+ E R+ +S + +
Sbjct: 13 YKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLW-ELMGREGSRNVAS---FNTMMRG 68
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L +G E+ + MKE G +ED + Y L+ F + + + A+++G D
Sbjct: 69 LFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALD 128
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ ++ + G ++K + V+ M + + + ++NG + A++V++
Sbjct: 129 AFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFK 188
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L ++ C P VTY ++IN C+ +++A + EM +KG++ V+ YS ++ +
Sbjct: 189 ELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDH 248
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
++ A++L ++ KG +P+V ++N L +HG
Sbjct: 249 KVEMALQLWNQVISKGFKPDVQMHNIL--IHG 278
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 114/265 (43%), Gaps = 3/265 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E MK +G V DS Y ++ F K G + K + E K + Y +
Sbjct: 82 WELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVL---EIAKQEGGALDAFAYSAMISG 138
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ + + M E G + VY +LI ++ + A +FKE +
Sbjct: 139 LCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPT 198
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + + ++V+ M N S +++ G + A++++
Sbjct: 199 IVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWN 258
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+IS+G P + +I+ C +G A +++ +M +V Y++++ + K G
Sbjct: 259 QVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGG 318
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYN 274
R+A+ + A++ G P++ YN
Sbjct: 319 DTRNALVIWARILRNGLLPDIISYN 343
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 106/269 (39%), Gaps = 5/269 (1%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEK-VAALFLECESRKLDLTPSSTH 61
+ LH E K G LD+ Y ++ K+G +K V+ L ES +T
Sbjct: 110 NNKSLHVLEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESG----CKPNTQ 165
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L + L + + + ++ F+++ + Y +LI A +L KE
Sbjct: 166 VYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEM 225
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
EKG + + L+ ++ VE L++ + + + ++++G
Sbjct: 226 LEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKT 285
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A ++Y + C P VTY +++ + + G A ++ + + G +++Y+
Sbjct: 286 EHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNIT 345
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
+ RI A+ + K P V
Sbjct: 346 LKGLCACNRISVAILFLNDAVTKNIVPTV 374
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 3/259 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ A G E+ L + S K D + Y IL +L + G+ E + +
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCD---PNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
MKEKG+ D Y LI +F + VA E + G L D+ + ++ + G
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
++ LE+ + + + + + A+ + +++S G P ++TY
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+I+ CR G+ +A ++ ++M+ F VV Y+ ++ + K RI DA+ ++ M
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 265 GCEPNVWIYNSLMDMHGRA 283
GC PN Y L++ G A
Sbjct: 538 GCRPNETTYTVLIEGIGFA 556
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 2/218 (0%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T M KI S +SG E L M KG D + LI F ++ + A + +
Sbjct: 90 TQMLKIFHRSC-RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME 148
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E+ G D+ + L+ + + ++ V++ M++ + + +++ R
Sbjct: 149 ILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A+KV QL+S C P +TY +I A G +A K+ EM +G + Y+
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+++ K G + A +V ++ KG EP+V YN L+
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILL 305
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 111/271 (40%), Gaps = 4/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH E M G D ++++ F+ + + K + E Y L
Sbjct: 109 LHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK----FGQPDVFAYNAL 164
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ K R + + M+ K D Y +I S S ++ +A ++ +
Sbjct: 165 INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + EG V++ L++++ M + L I+ G K A +
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ L +G P ++Y ++ A G + + EK+ +M + D VV YS ++
Sbjct: 285 MVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G+I +AM L+ MK KG P+ + Y+ L+
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 46/266 (17%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R D +P T Y I+ SL G+ LK + P+V I A++ E
Sbjct: 185 RSKDFSPD-TVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC--QPTVITYTILIEATMLE 241
Query: 111 VKVAE--ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS--DC 166
V E +L E +G+ D+ + ++ +EGMV++ E+V +N EL S D
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV---RNLELKGSEPDV 298
Query: 167 IS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIE 225
IS +++ + + K+ ++ S+ C P VTY+ +I CR G +A +
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 226 MQQKGF--------------------------------DKC---VVAYSSMVAMYGKTGR 250
M++KG D C +V Y++++A K G+
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSL 276
A+ + K+ GC PN YN++
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTM 444
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK G+ D+ Y ++ AF + G + VA FLE + D Y + +L K
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLD-VAIEFLE--TMISDGCLPDIVNYNTVLATLCK 415
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G+A + L+ F + E G + S Y ++ + S + A + E G+ D
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEIT 475
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ EGMV++ E++ M++ E + S +++ GF K A+ V E ++
Sbjct: 476 YNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Query: 193 SQGCIPGQVTYASII 207
GC P + TY +I
Sbjct: 536 GNGCRPNETTYTVLI 550
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV-IVNGFSKRRAYWAAV 185
RD ++ LK+ G ++L ++E+M N D I C ++ GF R AV
Sbjct: 87 FRDTQM-LKIFHRSCRSGNYIESLHLLETMVRKGYN-PDVILCTKLIKGFFTLRNIPKAV 144
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+V E L G P Y ++IN +C++ A +V M+ K F V Y+ M+
Sbjct: 145 RVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSL 203
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G++ A++++ ++ C+P V Y L++
Sbjct: 204 CSRGKLDLALKVLNQLLSDNCQPTVITYTILIE 236
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 141/322 (43%), Gaps = 38/322 (11%)
Query: 29 MEAFYKIGDSEKVAALFL---ECESRKLDL------------TPSSTHMYKILCDSLGKS 73
+ AF ++ S+ AA L C S L L P S H Y+ + + +S
Sbjct: 81 LPAFRRLAPSQAAAAAALRHAPCASSTLHLFSALHSPHSQLAMPPSAHSYRYVISLMCQS 140
Query: 74 GRAFEILKFFRDMKEK-GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
GR + L+ F M ++ G + + L S A+ + A L +A + G +
Sbjct: 141 GRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAAAALLSKASQFGCSIEAYA 200
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQL 191
+ KL+ ++I G V+ + + E + D S V++ G K A+++ E++
Sbjct: 201 YNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERM 260
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC---VVAYSSMVAMYGKT 248
GC P VT+ ++N CR SK +V +Q+ G C VV Y+S+++ Y K
Sbjct: 261 DEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGV--CMPNVVTYTSVISGYCKA 318
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----------------LRQLEKY 292
GR+ DAM + M G PNV YN L++ +G+A N L + +
Sbjct: 319 GRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTF 378
Query: 293 TTVISAYNMAREFDMCVKFYNE 314
+++I Y + D +K + E
Sbjct: 379 SSLIDGYCRCGQLDDAMKIWTE 400
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 121/271 (44%), Gaps = 4/271 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
K G +++ Y ++M+ F G + ALF E + +P + ++ +
Sbjct: 187 SKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALF-EGWIQGGVYSPD-VWSFNVVIKGV 244
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM-LRD 129
K G + L+ M E G D + L+ EV E+ + + G+ + +
Sbjct: 245 CKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPN 304
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++ Y + G +E + V M + + V++NG+ K +AV VY+
Sbjct: 305 VVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQ 364
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
Q+I + C+P VT++S+I+ YCR G A K++ EM Q + ++ + K
Sbjct: 365 QMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQN 424
Query: 250 RIRDAMRLVAKMKPK-GCEPNVWIYNSLMDM 279
R +A+ + KM + P +IYN ++D+
Sbjct: 425 RSGEALHFLKKMNMRTDIAPQAFIYNPVIDV 455
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 1/207 (0%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+GR + + + DM G + Y LI + + A ++++ + L D+
Sbjct: 317 KAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVV 376
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F L+ Y G ++ +++ M + + C+I++ F K+ A+ +++
Sbjct: 377 TFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKM 436
Query: 192 -ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ P Y +I+ C+ G +A + IEM++KG Y+ ++ + GR
Sbjct: 437 NMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGR 496
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM 277
I +A+ KM GC P+ + NS +
Sbjct: 497 IAEAVTFFHKMVETGCSPDSIVVNSFI 523
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 103/239 (43%), Gaps = 7/239 (2%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ + K G E A++ + + + +P+ Y +L + GK+G + ++
Sbjct: 308 YTSVISGYCKAGRMEDAMAVYNDMVA--VGTSPNVV-TYNVLINGYGKAGNMGSAVAVYQ 364
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M + L D ++SLI + ++ A +++ E + + + F ++ + ++
Sbjct: 365 QMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQN 424
Query: 145 MVEKTLEVVESMK-NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
+ L ++ M ++ I +++ K A + ++ +GC P + TY
Sbjct: 425 RSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTY 484
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKG--FDKCVV-AYSSMVAMYGKTGRIRDAMRLVA 259
+I +C G ++A F +M + G D VV ++ S + G G + MR+ A
Sbjct: 485 TILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPGEVDHIMRIAA 543
>gi|307105412|gb|EFN53661.1| hypothetical protein CHLNCDRAFT_58444 [Chlorella variabilis]
Length = 1131
Score = 87.8 bits (216), Expect = 6e-15, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 130/270 (48%), Gaps = 4/270 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E+M+ GI + + +M K G + ++ + ++ P++ Y L D
Sbjct: 315 EEMRDRGIERNVHTFSALMNVCIKCGQYKLALDVYRDMQAAG---CPANVVTYNTLIDVY 371
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GKSG+ E L MK + I + +L+ + + + + A ++++ +
Sbjct: 372 GKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAASSHPPNT 431
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ + + G + K L V + M S +++ K + A++++E+
Sbjct: 432 TTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGEWKLALQLFEE 491
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+ +GC+P ++Y S+I A + + KA +VF +MQ++G VV+Y++++ Y + G+
Sbjct: 492 MRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPDVVSYTALIQAYERGGQ 551
Query: 251 IRDAMRLVAKM-KPKGCEPNVWIYNSLMDM 279
R A+ +M + + C P+ +YN+++D+
Sbjct: 552 WRRALAAFEEMIRARPCAPDSIVYNTIIDV 581
Score = 77.8 bits (190), Expect = 7e-12, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 39/261 (14%)
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
GRA + + +M+++GI + +++L+ + K+A +++++ + G ++ +
Sbjct: 308 GRAMALAE---EMRDRGIERNVHTFSALMNVCIKCGQYKLALDVYRDMQAAGCPANVVTY 364
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ +Y + G E+ L V+E MK + ++ + + A++VYEQ+ +
Sbjct: 365 NTLIDVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAA 424
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
P TY ++I+A+ + G K VF EM QKG ++ V+ YSS+++ K G +
Sbjct: 425 SSHPPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGEWKL 484
Query: 254 AMRLVAKMK-----------------------------------PKGCEPNVWIYNSLMD 278
A++L +M+ +GC P+V Y +L+
Sbjct: 485 ALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPDVVSYTALIQ 544
Query: 279 MHGRAKNLRQ-LEKYTTVISA 298
+ R R+ L + +I A
Sbjct: 545 AYERGGQWRRALAAFEEMIRA 565
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 112/258 (43%), Gaps = 25/258 (9%)
Query: 70 LGKSG------RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
LGK G + F++L+ L D + S+I + + ++ A L +E +
Sbjct: 260 LGKGGLPHRGAQLFDLLRRLGPGSPLAPLLDEFTFTSMISNCVAQQDLGRAMALAEEMRD 319
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ R++ F L+ + I+ G + L+V M+ A + +++ + K +
Sbjct: 320 RGIERNVHTFSALMNVCIKCGQYKLALDVYRDMQAAGCPANVVTYNTLIDVYGKSGQWEE 379
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+ V EQ+ + P T+ +++ A + +A +V+ +M Y+++++
Sbjct: 380 ALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAASSHPPNTTTYNALIS 439
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
+ K G + + + +M KGCE +V Y+SL ISA A
Sbjct: 440 AHSKGGDLPKVLAVFKEMVQKGCERSVITYSSL-------------------ISACEKAG 480
Query: 304 EFDMCVKFYNEFRMNGGV 321
E+ + ++ + E R G V
Sbjct: 481 EWKLALQLFEEMRGEGCV 498
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q L YE+M ++ ++ Y ++ A K GD KV A+F E + + S Y
Sbjct: 413 QEALRVYEQMAASSHPPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCE---RSVITY 469
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L + K+G L+ F +M+ +G + + Y SLI + A A+ + A E+F++ +
Sbjct: 470 SSLISACEKAGEWKLALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQR 529
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYW 182
+G D+ + L+ Y G + L E M A D I I++ + W
Sbjct: 530 QGCRPDVVSYTALIQAYERGGQWRRALAAFEEMIRARPCAPDSIVYNTIIDVLWETGVGW 589
Query: 183 A---AVKVYEQLISQGCI 197
A A ++ Q ++G I
Sbjct: 590 AQRKAASLFRQASAEGLI 607
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 133/326 (40%), Gaps = 19/326 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M++ G+ D Y ++ + K G ++ AL L + R L P+ Y IL D
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNGYCKAGSLKE--ALLLFGDLRHAGLAPTVL-TYNILIDG 422
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G E + +M E+G L D Y L+ + + +A E F E KG+ D
Sbjct: 423 YCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPD 482
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + + G + K + E M ++ ++++G K A +
Sbjct: 483 CFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQM 542
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+++ G P +TY +I+A+C GL +A K F +M G V Y+ + Y + G
Sbjct: 543 KMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRG 602
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR--------QLEK--------YT 293
+ A KM +G EPN YN L+ R + LE+ YT
Sbjct: 603 NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYT 662
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNG 319
+I ++ ++FY E NG
Sbjct: 663 LLIDGNCKEGNWEDAMRFYFEMHQNG 688
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 122/273 (44%), Gaps = 6/273 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + +M S G+ D +++ + + A+ E +L + PS Y L
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAV--HAEMLQLGIEPSIV-TYNTL 243
Query: 67 CDSLGKSGRAFEILKFFRDMKEKG--ILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
DS K GR ++ ++M+ +G L + + +I A +++ A E+ +
Sbjct: 244 LDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLS 303
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ L+ + +G V+K ++ M+N + + +++G + AA
Sbjct: 304 KKASSF-TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAA 362
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ + G P +TY S++N YC+ G +A +F +++ G V+ Y+ ++
Sbjct: 363 QVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDG 422
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y + G + +A RL +M +GC P+V Y LM
Sbjct: 423 YCRLGDLEEARRLKEEMVEQGCLPDVCTYTILM 455
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 3/208 (1%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+LG +AF + + M +GI D Y LI + A++L + G+
Sbjct: 495 TLGAIAKAFRLREV---MMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQP 551
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ + E G++ + + + M + L S V ++ + +R ++A +
Sbjct: 552 DCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWF 611
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ +G P ++TY +I+A CR G A + F EM ++G Y+ ++ K
Sbjct: 612 RKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKE 671
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
G DAMR +M G P+ + +L
Sbjct: 672 GNWEDAMRFYFEMHQNGIHPDYLTHKAL 699
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 129/311 (41%), Gaps = 35/311 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ +M GI Y ++++F K G ++KVA L E E+R P+ + ++
Sbjct: 225 HAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDV-THNVVITG 283
Query: 70 LGKSG---RAFEILKFFR-------------------------------DMKEKGILEDP 95
L + G A E+++ R +M+ +GI+
Sbjct: 284 LARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTV 343
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
Y ++I +V+ A+ F E G+ D+ + L+ Y + G +++ L +
Sbjct: 344 VTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGD 403
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
+++A L + ++++G+ + A ++ E+++ QGC+P TY ++
Sbjct: 404 LRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACS 463
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+ A + F EM KG AY++ + G I A RL M +G + YN
Sbjct: 464 LAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNI 523
Query: 276 LMDMHGRAKNL 286
L+D + NL
Sbjct: 524 LIDGLCKTGNL 534
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 3/253 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ F+ G +K LFLE R + + Y + D L K+ F+
Sbjct: 206 YAIVINGFFTEGQVDKAYNLFLEMMDRGIQ---PNVVTYTTVIDGLCKAQVVDRAEGVFQ 262
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M +KG+ D Y LI + SI + K + +E G+ D + L+ G
Sbjct: 263 QMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNG 322
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+ + +SM + + I ++++G++ + A + ++ G P +
Sbjct: 323 RCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFN 382
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
I AY + + +A +F +M+Q+G VV Y +++ K GR+ DA+ +M +
Sbjct: 383 IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNE 442
Query: 265 GCEPNVWIYNSLM 277
G PN++++NSL+
Sbjct: 443 GVAPNIFVFNSLV 455
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 129/309 (41%), Gaps = 38/309 (12%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G+ D+ Y ++ + IG ++V + E + L + Y L +
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLK---PDCYTYGSLLNY 317
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L +GR E F M KGI + ++Y LI +A+ + +L E G+ D
Sbjct: 318 LCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPD 377
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+F + Y ++ M+++ + + MK L+ +++ K AV +
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFN 437
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF------------DKC--- 234
Q++++G P + S++ C + + KA++ + EM +G + C
Sbjct: 438 QMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497
Query: 235 --------------------VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
V++Y++++ + GRI +A + + M G +P+ W YN
Sbjct: 498 QVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYN 557
Query: 275 SLMDMHGRA 283
+L+ + RA
Sbjct: 558 TLLHGYCRA 566
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 135/326 (41%), Gaps = 58/326 (17%)
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
G+ E+++ +M G+ D Y SL+ + + A LF KG+ ++ ++
Sbjct: 287 GKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIY 346
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
L+ Y +G + + +++ M L+ I +I ++K+ A+ ++ ++
Sbjct: 347 GILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQ 406
Query: 194 QGCIPGQVTYASIINAYCRIGL-----------------------------------YSK 218
QG P V Y ++I+A C++G + K
Sbjct: 407 QGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEK 466
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A++ + EM +G VV +++++ G++ A RL+ M+ G P V Y +L+
Sbjct: 467 AKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIG 526
Query: 279 MH---GR----AKNLRQL---------EKYTTVISAYNMAREFDMCVKFYNEFRMNG--- 319
H GR AK+L + Y T++ Y A D + E NG
Sbjct: 527 GHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITP 586
Query: 320 GVIDRAMAGIMVGVFS--KLSQIEEL 343
GV+ + I+ G+F+ + S+ +EL
Sbjct: 587 GVV--TYSTILHGLFTTRRFSEAKEL 610
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN--ISDCIS-CVIVN 173
L K E G D+ + L+ + E E+ LE++ M +++ + +S +++N
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
GF A ++ +++ +G P VTY ++I+ C+ + +AE VF +M KG
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQL 289
Y+ ++ Y G+ ++ +R++ +M G +P+ + Y SL++ +GR + R L
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 124/302 (41%), Gaps = 38/302 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+H + KMK G+ D Y +++A K+G + F + + + + ++ L
Sbjct: 398 MHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGV---APNIFVFNSL 454
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L + + +F+ +M +GI D + +++C+ + +V A+ L E G
Sbjct: 455 VYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGT 514
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + G +++ + ++ M + L + +++G+ + A
Sbjct: 515 RPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYG 574
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG---------------- 230
V+ +++ G PG VTY++I++ +S+A+++++ M G
Sbjct: 575 VFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLS 634
Query: 231 -------------------FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVW 271
F + ++ M+ K+GR DAM L A + G P+V+
Sbjct: 635 KNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVF 694
Query: 272 IY 273
Y
Sbjct: 695 TY 696
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 79/204 (38%)
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
GR E K M G+ D Y +L+ + + A +F+E G+ + +
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
++ + E+ +M + + I +I+NG SK A K+++ L S
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+ T+ +I A + G A +F + G V Y + + G + +
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLM 277
L + M+ G PN + N+L+
Sbjct: 712 FDDLFSAMEKSGTTPNSRMLNALV 735
>gi|255660974|gb|ACU25656.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 372
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S + I+ L +G+ E++ + MKE G +ED Y L+ F + + +
Sbjct: 57 SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVL 116
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ AE+KG + D + ++ +E +++ + V+ M + + + ++NG
Sbjct: 117 EMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGA 176
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A++V+ ++ + C P +TY ++IN C+ ++ +A + E+ KG D V+ Y
Sbjct: 177 SKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITY 236
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
S ++ R+ A+ L ++ KG +P+V ++N L +HG
Sbjct: 237 SMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNIL--IHG 277
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 121/268 (45%), Gaps = 19/268 (7%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ ++++ E + D VY +++ + +A++K EL++ +G R + F ++
Sbjct: 10 RVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSSFNIMMRGL 68
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G V++ + + E MK + + D I+ ++V+GF K ++ V E +G +
Sbjct: 69 FDNGKVDEVISIWELMKESGF-VEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLD 127
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
Y+++IN C+ +A V M + G V Y++++ + DA+R+
Sbjct: 128 AFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFR 187
Query: 260 KMKPKGCEPNVWIYNSLMD------MHGRAKNLRQ--LEK--------YTTVISAYNMAR 303
+M C P + YN+L++ M G A NL + L+K Y+ ++ +
Sbjct: 188 EMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDH 247
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
+ + +N+ G D M I++
Sbjct: 248 RVERALXLWNQVTSKGFKPDVQMHNILI 275
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ AE ++KE E + D V+ ++ Y ++ E+ E M +E N S
Sbjct: 3 GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWE-MMGSEGNRSVSSF 61
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ G + ++E + G + +TY +++ +C+ G K+ V +Q
Sbjct: 62 NIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 121
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KG AYS+M+ K + A+ ++ M GC+PNV +YN+L++
Sbjct: 122 KGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLIN 171
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 100/249 (40%), Gaps = 3/249 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH E + G VLD+ Y ++ K + ++ ++ K P+ H+Y L
Sbjct: 113 LHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVL--NGMIKSGCKPN-VHVYNTL 169
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L + + + ++ FR+M Y +LI A L KE +KG+
Sbjct: 170 INGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGL 229
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + VE+ L + + + + ++++G A+
Sbjct: 230 DPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALS 289
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+Y + C P V++ +++ + + G A ++ + + G + +++Y+ +
Sbjct: 290 LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLC 349
Query: 247 KTGRIRDAM 255
RI DA+
Sbjct: 350 SCNRISDAI 358
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 29/329 (8%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC---- 67
+M G D Y I++ K G LE + L+ PS ++C
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEG--------HLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 68 -DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L + R E + +M +K D + L+ F V EL ++ G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ + ++ + +EG++++ + +++SM + + +++ G + A +
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ Q+I QGC P VT+ ++IN C+ GL +A ++ +M G +++YS+++ G
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRAKNLRQLEK------------ 291
K G+ +A+ L+ M KG PN IY+S+ + GR + Q+
Sbjct: 508 KAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAV 567
Query: 292 -YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y VIS+ E D + F+ NG
Sbjct: 568 LYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 121/273 (44%), Gaps = 7/273 (2%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + + + L GR + L+ +M KG P +Y ++ + + +
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYI-EEGMVEKTLEVVESMK--NAELNISDCISCVIVN 173
+ + KG D LVL I E+G V++ + ++ + E +I + ++
Sbjct: 168 VLEAMHAKGCTLDTG-NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA--VLK 224
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G + + ++ ++++ C P VT+ ++I CR GL+ + +V +M + G
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYT 293
+ Y++++ K G + A ++ +M G +PNV YN+++ A+ ++ E+
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
+ + + + D+ +F G++DR +
Sbjct: 345 SEMFQKDCPLD-DVTFNILVDFFCQNGLVDRVI 376
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/279 (18%), Positives = 116/279 (41%), Gaps = 13/279 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAAL-----FLECESRKLDLTPS 58
++ + E M + G LD+G ++ A + G ++ L F CE+ +
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVS---- 218
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
Y + L + R ++ + +M + + +LI + E+
Sbjct: 219 ----YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ E G D+ ++ ++ +EG +E E++ M + L + ++ G
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A ++ ++ + C VT+ +++ +C+ GL + ++ +M G V+ Y
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++++ + K G I +A+ L+ M GC+PN Y ++
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 77/174 (44%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + L + L K G + ++ + M G D Y+++I + + A E
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L KG+ + ++ + EG V K +++ +++K+ + + +++
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
KR A+ + ++S GC+P + TY +I GL +A+++ E+ +G
Sbjct: 578 KRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 5/231 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + K G E + + M G + Y ++ S AEEL +
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
++G + F L+ ++G+VE+ +E+++ M + D IS +++G K
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS-PDLISYSTVIDGLGKAGKT 512
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++ ++++G P + Y+SI A R G +K ++F ++ V Y+++
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRAKNLRQL 289
++ K A+ A M GC PN Y L + G AK ++L
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%)
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
EEL E ++ F L+ G+ E+ EV+ M + I++G
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K A ++ ++ S G P V Y +++ C + +AE++ EM QK
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V ++ +V + + G + + L+ +M GC P+V Y ++++
Sbjct: 356 DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 3/126 (2%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
++ L M + GI ++ Y I A + G KV +F ++ K S +
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMF---DNIKDTTIRSDAVL 568
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + SL K + FF M G + + S Y LI AS K A+EL E
Sbjct: 569 YNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELC 628
Query: 123 EKGMLR 128
+G LR
Sbjct: 629 SRGALR 634
>gi|255661136|gb|ACU25737.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 426
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 142/302 (47%), Gaps = 17/302 (5%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R+ L+P + Y L GK G L + + M++ + D +Y++LI + +
Sbjct: 1 RERALSPDR-YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 59
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
A +F + G D+ + ++ ++ + + + ++ M+ A + +
Sbjct: 60 YSKAISIFSRLKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYST 119
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ + + + + A+ V+ ++ C+ T +I+ Y ++G+ +A+K+F M++ G
Sbjct: 120 LLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 179
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------RAK 284
+ VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G +A
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239
Query: 285 NL------RQLEK----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
NL R +E Y+T+IS ++ + D + + R +G ID+ + M+ +
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 335 SK 336
K
Sbjct: 300 EK 301
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 125/279 (44%), Gaps = 3/279 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L + +KM+ + D Y ++E K+ D K ++F ++ TP Y
Sbjct: 27 AALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF--SRLKRSGFTPDIV-AYN 83
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ + GK+ E +M+ G+ + + Y++L+ + + A +F E E
Sbjct: 84 AMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREI 143
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
L DL ++ +Y + GM ++ ++ M+ + + ++ + + A
Sbjct: 144 KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEA 203
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ + + VTY S++ Y + + KA + EMQ +G + + YS+++++
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISI 263
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ K G++ A L K++ G + + +Y +++ + +A
Sbjct: 264 WSKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYEKA 302
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 150/333 (45%), Gaps = 30/333 (9%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK--LDLTPSSTHMYKILCDS 69
+M++AG+ ++ Y ++ + + + ++F E K LDLT + I+ D
Sbjct: 104 EMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCN-----IMIDV 158
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ G A E K F M++ GI + Y +L+ + A LF+ + K + ++
Sbjct: 159 YGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++++Y + EK +++ M+N + + I++ +SK A +++
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQ 278
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L S G QV Y ++I AY + GL + A+++ E+++ +A +V G
Sbjct: 279 KLRSSGVDIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRDIAIHILVG----AG 334
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
RI +A W++ +D G K++ E+ + S Y +++ V
Sbjct: 335 RIEEA---------------TWVFRQAIDA-GEVKDITVFERMIHLFSKY---KKYGNVV 375
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +++ G D + +++ + KL + ++
Sbjct: 376 EVFDKMCGLGYFPDSNVIALILNAYGKLHEFDK 408
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+H + M+ I + Y +M + K + EK L E ++R ++ P+S Y +
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE--PNSI-TYSTI 260
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK-G 125
K G+ F+ ++ G+ D +Y ++I ++ V A+ L E +
Sbjct: 261 ISIWSKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDN 320
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ RD+ + + + G +E+ V +A + +++ FSK + Y V
Sbjct: 321 IPRDIAIHI-----LVGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVV 375
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+V++++ G P A I+NAY ++ + KA V++EMQ+ G
Sbjct: 376 EVFDKMCGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVG 420
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 87/189 (46%), Gaps = 10/189 (5%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
++M+ +GI + Y+++I ++ + ++ A LF++ G+ D ++ +++ Y
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-RRAYWAAVKVYEQLISQGCIPG 199
+ G+V ++ +K + NI I+ I+ G + A W V+ Q I G +
Sbjct: 300 EKAGLVAHAKRLLHELKRPD-NIPRDIAIHILVGAGRIEEATW----VFRQAIDAGEVKD 354
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMRL 257
+ +I+ + + Y +VF +M G+ D V+A ++ YGK A +
Sbjct: 355 ITVFERMIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIAL--ILNAYGKLHEFDKANDV 412
Query: 258 VAKMKPKGC 266
+M+ GC
Sbjct: 413 YMEMQEVGC 421
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M++ GI +S Y I+ + K+G ++ A LF + S +D+ +Y+ + +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSGVDIDQV---LYQTMIVAY 299
Query: 71 GKSGRAFEILKFFRDMKEK-GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+G + ++K I D +++ ++ A +F++A + G ++D
Sbjct: 300 EKAGLVAHAKRLLHELKRPDNIPRDIAIHI-----LVGAGRIEEATWVFRQAIDAGEVKD 354
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ VF +++ ++ + +EV + M + +I+N + K + A VY
Sbjct: 355 ITVFERMIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIALILNAYGKLHEFDKANDVYM 414
Query: 190 QLISQGCI 197
++ GC+
Sbjct: 415 EMQEVGCV 422
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 6/223 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL D L K GR E + ++M G + Y +LI ++ + A EL +
Sbjct: 118 YSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLV 177
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G + D+ + +V +EG ++K L++VE M S ++ G +
Sbjct: 178 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVD 237
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++++S+ C + Y S++N YC+ +A+KV ++ + + Y++++
Sbjct: 238 EAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALM 294
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGR 282
Y K GR+ + + M +GC PN+ YN +MD HG+
Sbjct: 295 DGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGK 337
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 124/294 (42%), Gaps = 9/294 (3%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M + D Y +++ K ++K + + E R + TP + I+ D L K
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGV--TPDTVTFNSIM-DGLCK 57
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
+G+ M E+ Y +LI V A+ L E G + D+
Sbjct: 58 AGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVT 117
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L + G +++ E+V+ M + +++G K A ++ E L+
Sbjct: 118 YSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLV 177
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G +P VTY I++ C+ G KA K+ M ++G V+ Y++++ +TGR+
Sbjct: 178 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVD 237
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY------TTVISAYN 300
+A + +M K C + Y SL++ + ++ ++ +K T I YN
Sbjct: 238 EAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYN 291
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 22/275 (8%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
E + S+G V D Y I++ K G +K AL + K TPS Y L + L
Sbjct: 174 ETLVSSGFVPDVVTYTIIVDGLCKEGRLDK--ALKMVEGMLKRGCTPSVI-TYTALMEGL 230
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
++GR E F++M K D Y SL+ + + K A+++ +
Sbjct: 231 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI--- 287
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV--------IVNGFSKRRAYW 182
+V+ L+ Y +EG +++ V E M C CV +++G K
Sbjct: 288 DVYNALMDGYCKEGRLDEIPNVFEDMA--------CRGCVPNIKTYNIVMDGLCKHGKVD 339
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A E + S GC+P V+Y II+ + +A +V +M Q G V Y++++
Sbjct: 340 EAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM 399
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
A + K R DA+ ++ M G +P+ YN+L+
Sbjct: 400 AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 434
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 131/320 (40%), Gaps = 27/320 (8%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +M+ + K G +++ +F + R P+ Y I+ D L K G+ E F
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGC--VPN-IKTYNIVMDGLCKHGKVDEAFPFLE 346
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M G + D Y +I ++ K A ++ + + G+ D + L+ + +E
Sbjct: 347 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 406
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ-VTY 203
+ + ++++M A ++ + +++G S+ A ++ +++ GC+ TY
Sbjct: 407 RFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTY 466
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+II+ C+ G +A + M G + V Y+ + K GR+ +A L+++M
Sbjct: 467 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM-- 524
Query: 264 KGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEF-RMNGGVI 322
LR YTTVI A + D K E + G I
Sbjct: 525 --------------------DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCI 564
Query: 323 DRAMAGIMVGVFSKLSQIEE 342
+++ F+K +++E
Sbjct: 565 TSHTFNLLIDAFTKTKRLDE 584
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 93/211 (44%), Gaps = 4/211 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
S+ Y + D L K G + L M G+ + Y I + A L
Sbjct: 461 SACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL 520
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE-LNISDCISCVIVNGFS 176
E + LRD + +++ + +++ ++ M + L I+ ++++ F+
Sbjct: 521 LSEMD---TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFT 577
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K + A+ + E ++ +GC P +TY +I C++ KA ++F EM +G V
Sbjct: 578 KTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSV 637
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
+Y+ ++ GR ++A++++ +M CE
Sbjct: 638 SYTVLIYGLCGQGRGKEALQVLEEMASSDCE 668
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 14/271 (5%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ E M SAG V D Y I++ +K ++ + + + P Y L
Sbjct: 344 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI---PPDAVTYNTLMA 400
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG-ML 127
K R + + ++M + G+ D Y +LI + + A EL E G ++
Sbjct: 401 QFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVV 460
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ ++ +EG +++ L +++ M + + V N F R +
Sbjct: 461 SACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANT----VTYNIFIDRLCKEGRLDE 516
Query: 188 YEQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ-KGFDKCVVAYS--SMVA 243
L+S+ + +V+Y ++I C+ +A K+ EM KG C+ +++ ++
Sbjct: 517 ASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL--CITSHTFNLLID 574
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ KT R+ +A+ L+ M +GC P+V YN
Sbjct: 575 AFTKTKRLDEALTLLELMVQRGCSPSVITYN 605
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 56/145 (38%), Gaps = 19/145 (13%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P TY +I+ C+ KA ++ EM +G V ++S++ K G+ A L
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 258 VAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRM 317
+A M + C P+ YN+L IS + D +EF
Sbjct: 68 LAVMAERNCRPSCCTYNTL-------------------ISGLCKQQNVDRAKTLVDEFVS 108
Query: 318 NGGVIDRAMAGIMVGVFSKLSQIEE 342
+G V D I+ K +I+E
Sbjct: 109 SGFVPDVVTYSILADGLCKRGRIDE 133
>gi|297792331|ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
gi|297309885|gb|EFH40309.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
Length = 723
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 150/330 (45%), Gaps = 21/330 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+EKM G+ + ++++F G E+ + E E + + S+T +Y L D+
Sbjct: 332 FEKMSDKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIR---SNTIVYNTLMDA 388
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KS E+ F ++K KG+ + Y L+ ++A + + E L +E E+ G+ +
Sbjct: 389 YNKSNHIEEVEGLFAEIKAKGLKPTAATYNILMDAYARRMQPDIVETLLREMEDLGLEPN 448
Query: 130 LEVFLKLVLMY-IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ F L+ Y + M + + MK L S +++ +S + A +
Sbjct: 449 VKSFTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASF 508
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ +G P TY S+++A+ R G K +++ M ++ + Y++++ + K
Sbjct: 509 EEMWMEGIKPSVETYTSLLDAFRRSGDTEKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ 568
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA---KNLRQLEK-------------Y 292
G +A +V++ G +P+V YN LM+ + R L QL K Y
Sbjct: 569 GLYIEARDVVSEFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITY 628
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVI 322
+T+I A+ R+F FY++ + G +
Sbjct: 629 STMIYAFVRVRDFKRAF-FYHKMMVKSGQV 657
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 122/265 (46%), Gaps = 31/265 (11%)
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICS--FASIAEVKVAEE---LFKEAEEK 124
+G+SG L F+ M L++PS+ + CS F + ++A+ L +K
Sbjct: 212 MGESGFVKSCLYFYEWMS----LQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDK 267
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNI-SDCISCVIVNGFSKR--RAY 181
+D+ ++ + + EV E+M ++N+ D ++C I+ ++ R+
Sbjct: 268 EEFKDVRLYNAAISGLSASQRYDDAWEVYEAMN--KINVFPDNVTCAIMITTMRKAGRSA 325
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+++E++ +G Q + ++ ++C GL +A + EM++KG + Y+++
Sbjct: 326 KEVWEIFEKMSDKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTL 385
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN-------LRQLE---- 290
+ Y K+ I + L A++K KG +P YN LMD + R LR++E
Sbjct: 386 MDAYNKSNHIEEVEGLFAEIKAKGLKPTAATYNILMDAYARRMQPDIVETLLREMEDLGL 445
Query: 291 -----KYTTVISAYNMAREF-DMCV 309
+T +ISAY ++ DM
Sbjct: 446 EPNVKSFTCLISAYGRTKKMSDMAA 470
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 126/288 (43%), Gaps = 20/288 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ ++K+ G+ + Y +M+A+ + + V L E E L L P+ + L +
Sbjct: 402 FAEIKAKGLKPTAATYNILMDAYARRMQPDIVETLLREMED--LGLEPN-VKSFTCLISA 458
Query: 70 LGKSGRAFEIL-KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
G++ + ++ F MK+ G+ Y +LI +++ + A F+E +G+
Sbjct: 459 YGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMWMEGIKP 518
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+E + L+ + G EK +E+ + M ++ + +++GF+K+ Y A V
Sbjct: 519 SVETYTSLLDAFRRSGDTEKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVV 578
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ G P +TY ++NAY R G +K ++ EM + YS+M+ +
Sbjct: 579 SEFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF--- 635
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVI 296
R+RD R + Y+ +M G+ + R EK ++
Sbjct: 636 VRVRDFKR-------------AFFYHKMMVKSGQVPDPRSYEKLRAIL 670
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 121/274 (44%), Gaps = 6/274 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTP-SSTHMYKI 65
L++YE M L S C ++ F +G E++A L S D +Y
Sbjct: 222 LYFYEWMSLQEPSLASPRACSVL--FTLLG-RERMADYILLLLSNLPDKEEFKDVRLYNA 278
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE-VKVAEELFKEAEEK 124
L S R + + + M + + D A +I + K E+F++ +K
Sbjct: 279 AISGLSASQRYDDAWEVYEAMNKINVFPDNVTCAIMITTMRKAGRSAKEVWEIFEKMSDK 338
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+ +VF LV + +EG+ E+ L + M+ + + + +++ ++K
Sbjct: 339 GVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEV 398
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ ++ ++G P TY +++AY R E + EM+ G + V +++ +++
Sbjct: 399 EGLFAEIKAKGLKPTAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSFTCLISA 458
Query: 245 YGKTGRIRD-AMRLVAKMKPKGCEPNVWIYNSLM 277
YG+T ++ D A +MK G +P+ Y +L+
Sbjct: 459 YGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALI 492
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 20/171 (11%)
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK-AEKVFIEMQQKG 230
++G S + Y A +VYE + P VT A +I + G +K ++F +M KG
Sbjct: 280 ISGLSASQRYDDAWEVYEAMNKINVFPDNVTCAIMITTMRKAGRSAKEVWEIFEKMSDKG 339
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
+ +V + G +A+ + +M+ KG N +YN+LMD
Sbjct: 340 VKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMD------------ 387
Query: 291 KYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
AYN + + + E + G A I++ +++ Q +
Sbjct: 388 -------AYNKSNHIEEVEGLFAEIKAKGLKPTAATYNILMDAYARRMQPD 431
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 125/266 (46%), Gaps = 8/266 (3%)
Query: 17 GIVLDSGCYCQIMEAFYKIGDSEKVAALF-LECESRKLDLTPSSTHMYKILCDSLGKSGR 75
G+V D Y I+ F K G K L C+ ++P+ Y L + L K+G
Sbjct: 651 GLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQK---GISPNII-TYNALINGLCKAGE 706
Query: 76 AFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
+ F + KG+ + YA++I + + A LF E KG+ D V+
Sbjct: 707 IERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSA 766
Query: 136 LVLMYIEEGMVEKTLEV-VESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ +EG EK L + +ES++ + S + +++GF K A ++ E ++ +
Sbjct: 767 LIDGCRKEGNTEKALSLFLESVQKGFASTSSLNA--LMDGFCKSGKVIEANQLLEDMVDK 824
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
P VTY +I+ +C+ G +AE+ F++MQ++ + Y+++++ Y GR +
Sbjct: 825 HVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEM 884
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMH 280
L +M K EP+ ++ ++D H
Sbjct: 885 FALFDEMIAKDIEPDGVTWSVMIDAH 910
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 132/280 (47%), Gaps = 3/280 (1%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
M G+V D Y +++ F K + + E S+ L P Y L D +
Sbjct: 297 MDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSK--GLKPGHV-AYTALIDGFMR 353
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G + E + +M +G+ + Y +L+ +++ A+ L E G+ D +
Sbjct: 354 QGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQT 413
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ ++ Y++E + +++ MK + L + +I+NG + + A +V+E ++
Sbjct: 414 YNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMV 473
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
S G P V Y ++I + + G + +A ++ M +KG V+ Y+S++ K+ ++
Sbjct: 474 SLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKME 533
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+A + +M +G +PNV+ Y +L+ + ++ ++ ++Y
Sbjct: 534 EAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRY 573
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 123/287 (42%), Gaps = 50/287 (17%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L D K G E FR M + + D Y++LI +++ A EL E EKG
Sbjct: 592 LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG 651
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
++ D+ + ++ + ++G + K ++ E M ++ + ++NG K A
Sbjct: 652 LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERAR 711
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA-- 243
++++ + +G VTYA+II+ YC+ G SKA ++F EM KG YS+++
Sbjct: 712 ELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGC 771
Query: 244 ------------------------------MYG--KTGRIRDAMRLVAKMKPKGCEPNVW 271
M G K+G++ +A +L+ M K +P+
Sbjct: 772 RKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHV 831
Query: 272 IYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMA 302
Y L+D H + L++ E+ YT ++S YNMA
Sbjct: 832 TYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMA 878
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 114/244 (46%), Gaps = 2/244 (0%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+F+ M E +L D Y LI + K + L E EEKG L + ++
Sbjct: 222 RFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGL 281
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
G V++ E+ + M L ++D + ++++GF K++ A + E++ S+G PG
Sbjct: 282 CRAGEVDEAFELKKLMDKKGL-VADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPG 340
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
V Y ++I+ + R G +A +V EM +G + Y+++V K G + A L+
Sbjct: 341 HVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLN 400
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
+M G +P+ YN++++ + + +N +++ + + N+ C N +G
Sbjct: 401 EMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHG 460
Query: 320 GVID 323
+ D
Sbjct: 461 SIED 464
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L KS + E + +M E+G+ + Y +LI + E++VA+ FKE G+
Sbjct: 525 GLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAP 584
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ V L+ Y +EG + + M ++ +++G + A+++
Sbjct: 585 NDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELL 644
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ + +G +P TY SII+ +C+ G KA ++ M QKG ++ Y++++ K
Sbjct: 645 SEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKA 704
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
G I A L + KG N Y +++D + ++ NL +
Sbjct: 705 GEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSK 744
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M GI D+ Y ++E + K ++ +V L E +K +L P++ + ++ + L
Sbjct: 400 NEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLL--SEMKKSNLVPTA-YTCGMIINGL 456
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ G + + F M G+ + +Y +LI + A + K ++KG+ D+
Sbjct: 457 CRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDV 516
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ +++ + +E+ + + M L + +++G+ K A + +++
Sbjct: 517 LCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKE 576
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++ G P V ++I+ YC+ G ++A +F M + V YS+++ + G+
Sbjct: 577 MLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGK 636
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ AM L+++ KG P+V+ YNS++
Sbjct: 637 LQGAMELLSEFLEKGLVPDVFTYNSII 663
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 122/278 (43%), Gaps = 4/278 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N +++M G+ DS Y +++ K G++EK +LFLE + +ST
Sbjct: 741 NLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF----ASTS 796
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
L D KSG+ E + DM +K + D Y LI +K AE+ F +
Sbjct: 797 SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDM 856
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+++ ++ + + L+ Y G + + + M ++ V+++ K +
Sbjct: 857 QKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDH 916
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+K+ + ++ +G + +I+ CR S+ KV +++++G + + S++
Sbjct: 917 VKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTL 976
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
V + K G++ A R++ M P+ N L+++
Sbjct: 977 VRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINV 1014
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 131/311 (42%), Gaps = 40/311 (12%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y+++M GI + +++ + K G + + ++F R + Y L
Sbjct: 573 YFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVH---PDVRTYSALIH 629
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L ++G+ ++ + EKG++ D Y S+I F + A +L + +KG+
Sbjct: 630 GLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISP 689
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + L+ + G +E+ E+ + + L + I++G+ K A +++
Sbjct: 690 NIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLF 749
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF----------------- 231
+++ +G P Y+++I+ + G KA +F+E QKGF
Sbjct: 750 DEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSG 809
Query: 232 -------------DKCV----VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
DK V V Y+ ++ + KTG +++A + M+ + PN Y
Sbjct: 810 KVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYT 869
Query: 275 SLM---DMHGR 282
+L+ +M GR
Sbjct: 870 ALLSGYNMAGR 880
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 151/392 (38%), Gaps = 83/392 (21%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE----------------------- 47
E+M + G+ L+ Y +++ K GD EK AL E
Sbjct: 365 EEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKE 424
Query: 48 ----------CESRKLDLTPSSTHMYKI---LC--DSLGKSGRAFEIL------------ 80
E +K +L P++ I LC S+ + R FEI+
Sbjct: 425 QNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIY 484
Query: 81 -----------------KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ + M +KG+ D Y S+I +++ A++ E E
Sbjct: 485 TTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIE 544
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+G+ ++ + L+ Y + G ++ + M + +D + +++G+ K +
Sbjct: 545 RGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTE 604
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ ++ + P TY+++I+ R G A ++ E +KG V Y+S+++
Sbjct: 605 ATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIIS 664
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL----------- 289
+ K G I A +L M KG PN+ YN+L++ G + R+L
Sbjct: 665 GFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAH 724
Query: 290 --EKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y T+I Y + + ++E + G
Sbjct: 725 NAVTYATIIDGYCKSGNLSKAFRLFDEMTLKG 756
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ Y L ++ ++G A E + +M+EKG Y +I EV A EL K
Sbjct: 237 YTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKL 296
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
++KG++ D+ + L+ + ++ + ++E M + L +++GF ++
Sbjct: 297 MDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGD 356
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A +V E+++++G TY +++ C+ G KA+ + EM G Y++
Sbjct: 357 SGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNN 416
Query: 241 MVAMYGK---TGRIRDAMRLVAKMKPKGCEPNVW 271
M+ Y K T R++D L+++MK P +
Sbjct: 417 MIEGYLKEQNTSRVKD---LLSEMKKSNLVPTAY 447
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 119/268 (44%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G + Y +++ K G + L + E RK+ L Y I+ D L
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK---YSIIIDGL 257
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G F +M+ KG D +Y +LI F +L ++ ++ + D+
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +++EG + + E+ + M ++ +++GF K A + +
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++S+GC P T+ +IN YC+ L ++F +M +G V Y++++ + + G+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ A L +M + P++ Y L+D
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLD 465
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 132/295 (44%), Gaps = 35/295 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS-----STHMYK 64
+++M GI D+ Y +++ F K +K + LDL S + +
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM--------LDLMVSKGCGPNIRTFN 391
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
IL + K+ + L+ FR M +G++ D Y +LI F + +++VA+ELF+E +
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ D+ + L+ + G EK LE+ E ++ +++ + I +I++G A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ L +G P TY +I C+ G S+A+ +F +M++ G Y+ ++
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 245 YGKTG----------------------RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ G +R A+ +A+M G EP+V+ + +L+
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLL 626
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/276 (19%), Positives = 114/276 (41%), Gaps = 19/276 (6%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L + L +G+ + + M E G + Y ++ + +A EL ++ EE+
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ D + ++ ++G ++ + M+ I ++ GF +
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K+ +I + P V ++++I+ + + G +AE++ EM Q+G V Y+S++ +
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREF 305
K ++ A ++ M KGC PN+ +N L I+ Y A
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNIL-------------------INGYCKANLI 403
Query: 306 DMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
D ++ + + + G V D ++ F +L ++E
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 127/322 (39%), Gaps = 63/322 (19%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + KM G+V D+ Y +++ F ++G E LF E SR++ S YKIL
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS---YKIL 463
Query: 67 CDSL---GKSGRAFEILK--------------------------------FFRDMKEKGI 91
D L G+ +A EI + F + KG+
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Query: 92 LEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLE 151
D Y +I + A+ LF++ EE G + + L+ ++ EG K+ +
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK 583
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWA-AVKVYEQLISQGCIPGQVTYASIINAY 210
++E +K GFS + A+ +++ G P T+ +++ +
Sbjct: 584 LIEEIKRC--------------GFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPF 629
Query: 211 C---RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
C +Y A +F M+ G+ VV Y++++ I ++ +M +GC+
Sbjct: 630 CLEENASVYD-APTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQ 688
Query: 268 PNVWIYNSLM------DMHGRA 283
PN ++ + D+HG A
Sbjct: 689 PNAVTKSTFISGLCKQDLHGSA 710
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N + R A ++I G P VT++++IN C G S+A ++ M +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN---- 285
G ++ +++V G++ DA+ L+ +M G +PN Y ++ + ++
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 286 ---LRQLE---------KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
LR++E KY+ +I D +NE + G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
>gi|410110065|gb|AFV61112.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
citrodora]
Length = 435
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 142/304 (46%), Gaps = 17/304 (5%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E R+ L+P + Y L GK G L + + M++ + D +Y++LI +
Sbjct: 6 EMRERALSPDR-YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 64
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ A +F + G DL + ++ ++ + + + ++ MK A + +
Sbjct: 65 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASY 124
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
++ + + + + A+ V+ ++ C+ T +I+ Y ++G+ +A+K+F M++
Sbjct: 125 STLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 184
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------R 282
G + VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G +
Sbjct: 185 MGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 244
Query: 283 AKNL------RQLEK----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVG 332
A NL R +E Y+T+IS + + D + + R +G ID+ + M+
Sbjct: 245 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIV 304
Query: 333 VFSK 336
+ +
Sbjct: 305 AYER 308
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 127/279 (45%), Gaps = 3/279 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L + +KM+ + D Y ++E K+ D K ++F ++ TP Y
Sbjct: 34 AALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF--SRLKRSGFTPDLV-AYN 90
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ + GK+ E +MK G++ + + Y++L+ + + A +F E E
Sbjct: 91 AMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMREI 150
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
L DL ++ +Y + GM ++ ++ M+ + + ++ + + A
Sbjct: 151 KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIETNVVSYNTLLRVYGDAELFGEA 210
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ + + VTY S++ Y + + KA + EMQ +G + + YS+++++
Sbjct: 211 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISI 270
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+GK G++ A L K++ G E + +Y +++ + RA
Sbjct: 271 WGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERA 309
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 155/335 (46%), Gaps = 34/335 (10%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK----LDLTPSSTHMYKILC 67
+MK+AG++ ++ Y ++ + + + + + AL + E R+ LDLT + I+
Sbjct: 111 EMKTAGVMPNTASYSTLLTMY--VENKKFIEALSVFSEMREIKCLLDLTTCN-----IMI 163
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D G+ G A E K F M++ GI + Y +L+ + A LF+ + K +
Sbjct: 164 DVYGQLGMAKEADKLFWGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 223
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+++ + ++++Y + EK +++ M+N + + I++ + K A +
Sbjct: 224 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 283
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+++L S G QV Y ++I AY R GL + A+++ E+ K D + + + +
Sbjct: 284 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHEL--KSPDN--IPRDTAIHILAG 339
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDM 307
GRI +A +++ +D G K++ E+ + S Y +++
Sbjct: 340 AGRIEEA---------------TYVFRQAIDA-GEVKDITVFERMIHLFSKY---KKYAN 380
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
V+ +++ R G D + +++ + KL ++++
Sbjct: 381 AVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDK 415
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 93/192 (48%), Gaps = 21/192 (10%)
Query: 152 VVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ-VTYASIINAY 210
+ + M+ L+ ++ F K + AA+ + Q + Q +PG V Y+++I
Sbjct: 3 LFDEMRERALSPDRYTYSTLITHFGKEGLFDAALS-WLQKMEQDRVPGDLVLYSNLIELS 61
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
++ YSKA +F +++ GF +VAY++M+ ++GK R+A L+++MK G PN
Sbjct: 62 RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNT 121
Query: 271 WIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIM 330
Y++L+ M+ K K+ +S ++ RE C ++D IM
Sbjct: 122 ASYSTLLTMYVENK------KFIEALSVFSEMREIK-C------------LLDLTTCNIM 162
Query: 331 VGVFSKLSQIEE 342
+ V+ +L +E
Sbjct: 163 IDVYGQLGMAKE 174
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 9/225 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+H + M+ I + Y +M + K + EK L E ++R ++ P+S Y +
Sbjct: 211 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE--PNSI-TYSTI 267
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK-G 125
GK G+ F+ ++ G+ D +Y ++I ++ V A+ L E +
Sbjct: 268 ISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDN 327
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ RD + + G +E+ V +A + +++ FSK + Y AV
Sbjct: 328 IPRDTAIHI-----LAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANAV 382
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+V++++ G P A ++NAY ++ KA V++EMQ+ G
Sbjct: 383 EVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKANDVYMEMQEVG 427
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
++M+ +GI + Y+++I + + ++ A LF++ G+ D ++ +++ Y
Sbjct: 247 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAY 306
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
G+V ++ +K+ + NI + I+ G + A V+ Q I G +
Sbjct: 307 ERAGLVAHAKRLLHELKSPD-NIPRDTAIHILAGAGRIEE---ATYVFRQAIDAGEVKDI 362
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMRLV 258
+ +I+ + + Y+ A +VF +M+ G+ D V+A ++ YGK + A +
Sbjct: 363 TVFERMIHLFSKYKKYANAVEVFDKMRGLGYFPDSNVIAL--VLNAYGKLHELDKANDVY 420
Query: 259 AKMKPKGC 266
+M+ GC
Sbjct: 421 MEMQEVGC 428
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 140/307 (45%), Gaps = 11/307 (3%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAAL-FLECESRKLDLTPSSTHMYKILCDSLG 71
+K+ G+ Y +++ + K G + + + L E + ++P++ + +L +
Sbjct: 217 IKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAV-TFGVLINGYC 275
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K+ ++ F +MK++GI Y SLI S +V+ +L +E E+ G+ +
Sbjct: 276 KNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEI 335
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F ++ + ++GM+ + ++ M + I ++++G+ + A+ V E +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAM 395
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+G P TY +I + R G + A + EM++KG + VV Y+ ++ G +
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEV 455
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
R A++L+ +M G EPN YN+++ N++ SAY + + C K
Sbjct: 456 RKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIK---------SAYEIRTRMEKCRKR 506
Query: 312 YNEFRMN 318
N N
Sbjct: 507 ANVVTYN 513
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 116/276 (42%), Gaps = 3/276 (1%)
Query: 1 TNSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST 60
+N+ + + +E+MK GI Y ++ G E+ L E E L L+P+
Sbjct: 278 SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED--LGLSPNEI 335
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
+ + K G + + M E+ + D +Y LI + + +++ A + +
Sbjct: 336 -TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEA 394
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+KG+ ++ + L+ + G +++ MK + V++ +
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
AVK+ +++ G P +TY +II +C G A ++ M++ VV Y+
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+ + + G++ +A L+ +M K PN Y ++
Sbjct: 515 FIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG----LYSKAEKVFIE 225
+++G + A V + + + G P TY S+I+ YC+ G +Y + + E
Sbjct: 196 TVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY-HVDMLLKE 254
Query: 226 MQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
M + G V + ++ Y K A+R+ +MK +G +V YNSL+
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 138/323 (42%), Gaps = 52/323 (16%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
KSG+ E + F+++ E G + Y +L+ + + K + EEK M D
Sbjct: 84 KSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSI 143
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF---------------- 175
F L+ + E G +E +VV+ MK + L S C ++ G+
Sbjct: 144 FFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLM 203
Query: 176 SKRRAYWAAVKVYEQLI--------------------SQGCIPGQVTYASIINAYCRIGL 215
S +K Y LI + G P VT+ +I AY + G
Sbjct: 204 STEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGK 263
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
++AE + +EMQ+ + +++ Y + G++++A+R V +MK G +PN+ + NS
Sbjct: 264 TAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNS 323
Query: 276 L-------MDMHGRAKNLRQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
L MD G + L+ +E+ Y+T+++A++ A + C + YN +G
Sbjct: 324 LVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSG 383
Query: 320 GVIDRAMAGIMVGVFSKLSQIEE 342
D I+ + + ++E+
Sbjct: 384 VKPDAHAYSILAKGYVRAQEMEK 406
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 119/290 (41%), Gaps = 38/290 (13%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
KM ++G+ D + I A+ + G + + A+ LE + L + I+
Sbjct: 238 KMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLK---PNERTCTIIISGYC 294
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G+ E L+F MK+ G+ + V SL+ F + + +E+ K EE + D+
Sbjct: 295 REGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVI 354
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ ++ + + G +EK E+ Y +
Sbjct: 355 TYSTIMNAWSQAGFLEKCKEI-----------------------------------YNNM 379
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+ G P Y+ + Y R KAE++ M + G VV ++++++ + GR+
Sbjct: 380 LKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRM 439
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
+AMR+ KM G PN+ + +L+ + AK + E ++ +++
Sbjct: 440 DNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHV 489
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 118/278 (42%), Gaps = 4/278 (1%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEIL 80
DS + ++ AF + G+ E + + ++ L PS+ Y L G +G+ E +
Sbjct: 141 DSIFFNALINAFAESGNMEDAKKVVQKM--KESGLKPSAC-TYNTLIKGYGIAGKPDESM 197
Query: 81 KFFRDMKEKG-ILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
K M +G + + Y LI + + + A + + GM D+ F +
Sbjct: 198 KLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATA 257
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
Y + G + ++ M+ L ++ +I++G+ + A++ ++ G P
Sbjct: 258 YAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPN 317
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+ S++N + + ++V M++ V+ YS+++ + + G + +
Sbjct: 318 LIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYN 377
Query: 260 KMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVIS 297
M G +P+ Y+ L + RA+ + + E+ TV++
Sbjct: 378 NMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMT 415
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 153/339 (45%), Gaps = 20/339 (5%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
+++ ++EKM G+ ++++F G + + E E + + S+T
Sbjct: 311 SAKDAWQFFEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVS---SNTI 367
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L D+ KS R E F +MK KGI + + L+ +++ + ++ E+L E
Sbjct: 368 VYNTLMDAYCKSNRVEEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEM 427
Query: 122 EEKGMLRDLEVFLKLVLMY-IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+E G+ + + + ++ Y ++ M + + MK + + +++ +S
Sbjct: 428 QETGLKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGW 487
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
+ A +E + +G P TY ++++A+ R G K++ M+++ + V +++
Sbjct: 488 HEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGTRVTFNT 547
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR---------------AKN 285
+V + K G ++A +++K G P V YN LM+ + R A N
Sbjct: 548 LVDGFAKHGYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPELLEEMAAHN 607
Query: 286 LRQLE-KYTTVISAYNMAREFDMCVKFYNEFRMNGGVID 323
L+ Y+T+I A+ R+F ++ E +G V+D
Sbjct: 608 LKPDSVTYSTMIYAFLRVRDFSQAFFYHQEMVKSGQVMD 646
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 29/264 (10%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICS--FASIAEVKVAEEL---FKEAEEKGMLRDLEVFL 134
L FF+ M+ ++PS+ C+ F + + K+ ++L F RD V+
Sbjct: 209 LYFFQWMRS----QEPSLVTPRACTVLFPLLGKAKMGDKLMVLFTNLPSSREFRDSHVYN 264
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA--AVKVYEQLI 192
+ + E +V ESM+ A+ + D ++C I+ ++ + A A + +E++
Sbjct: 265 AAISGLLSSARYEDAWKVYESME-ADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFFEKMN 323
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
+G G+ ++I ++C GL S+A + E+++KG + Y++++ Y K+ R+
Sbjct: 324 GKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVE 383
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVI 296
+A L +MK KG +P +N LM + R +EK YT +I
Sbjct: 384 EAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCII 443
Query: 297 SAYNMAREF-DMCVKFYNEFRMNG 319
SAY + DM + + + +G
Sbjct: 444 SAYGKQKNMSDMAADAFLKMKKDG 467
>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 484
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 2/240 (0%)
Query: 38 SEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
SE F E L TH+ KI+ + LG++ + DM +KG+ D +
Sbjct: 25 SEHALQFFRWVERSNLFEHNRETHL-KII-EILGRASKLNHARCILLDMPKKGLEWDEDM 82
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ +I S+ V+ + +LF++ EE G+ R ++ + L + + G M
Sbjct: 83 WVMMIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKML 142
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ + + V++ GF A + +E + S+ P VTY ++IN Y R+
Sbjct: 143 SEGIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKXE 202
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+AEK F+EM+ + + VV Y++++ Y ++ DA+RLV +MK G +PN Y++L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAIXYSTLL 262
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 121/278 (43%), Gaps = 13/278 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++E MKS I D Y ++ +Y++ E+ F+E + R ++ T + Y L
Sbjct: 172 FFEDMKSREISPDVVTYNTMINGYYRVKKXEEAEKYFVEMKGRNIEPTVVT---YTTLIK 228
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML- 127
+ + L+ +MK GI + Y++L+ + ++ A + KE +K +
Sbjct: 229 GYVSVDQVDDALRLVEEMKGFGIKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDKYLAP 288
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D +F++L+ + G ++ +V+++M + V++ F K Y AVK+
Sbjct: 289 TDNSIFMRLITSQCKSGNLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKL 348
Query: 188 YEQLISQGCI--PGQV------TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
++LI + I P Y +I C G +KAE + ++ + G A +
Sbjct: 349 LDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKWGVQDP-TALN 407
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+++ + + G A L+ M + + Y+SL+
Sbjct: 408 TLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLV 445
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/280 (17%), Positives = 117/280 (41%), Gaps = 54/280 (19%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE-DPSVYASLICSFASIAEVK 112
+L PS H +++ + L + + L+FFR ++ + E + + +I +++
Sbjct: 5 NLXPSFDH--ELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
A + + +KG+ D ++++ ++ Y ++G+V++++++ + M+ EL + I
Sbjct: 63 HARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKME--ELGVERTIK---- 116
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+Y ++ R G Y A++ F +M +G +
Sbjct: 117 -----------------------------SYDALFKVILRRGRYMMAKRYFNKMLSEGIE 147
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK- 291
+ ++ + +G++ A R MK + P+V YN++++ + R K + EK
Sbjct: 148 PTRXTFXVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKXEEAEKY 207
Query: 292 ---------------YTTVISAYNMAREFDMCVKFYNEFR 316
YTT+I Y + D ++ E +
Sbjct: 208 FVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK 247
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 138/331 (41%), Gaps = 16/331 (4%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++EA + E+ A+ E R TP+ Y ++ + + + GR + +
Sbjct: 181 YTVLLEAMCRNSGFEQAMAVLDE--MRAKGCTPNIV-TYNVIINGMCREGRVDDARELLN 237
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
+ G D Y +L+ + EELF E EK + + F L+ + G
Sbjct: 238 RLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGG 297
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
MVE+ ++V+E M + + +++N K+ A K+ + S GC P ++Y
Sbjct: 298 MVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYT 357
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+++ CR + A+++ EM + V +++ + + + G I A+ L+ +M
Sbjct: 358 TVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEH 417
Query: 265 GCEPNVWIYNSLMD---MHGRAKNLRQLEK----------YTTVISAYNMAREFDMCVKF 311
GC V YN+L++ + G + +L + YTT+++ A D +
Sbjct: 418 GCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAEL 477
Query: 312 YNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
E + ++V F + +EE
Sbjct: 478 VAEMLRGDCPPNVVTFNVLVSFFCQKGFLEE 508
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 101/221 (45%), Gaps = 3/221 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++T + I+ +S+ K GR + K DM G D Y +++ A+EL
Sbjct: 316 TNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKEL 375
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E + F + + ++G++E+ + ++E M + +VNGF
Sbjct: 376 LNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCV 435
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ +A++++ S C P +TY +++ C A ++ EM + VV
Sbjct: 436 QGHIDSALELFR---SMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVT 492
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +V+ + + G + +A+ LV +M GC PN+ YN+L+D
Sbjct: 493 FNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLD 533
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 99/225 (44%), Gaps = 4/225 (1%)
Query: 60 THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
T + ++LCD GR + L DM +G + Y L+ + + + A +
Sbjct: 147 TPLIRVLCDR----GRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLD 202
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRR 179
E KG ++ + ++ EG V+ E++ + + ++ G +
Sbjct: 203 EMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASK 262
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
+ +++ +++ + C+P +VT+ +I +CR G+ +A +V +M + G +
Sbjct: 263 RWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCN 322
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAK 284
++ K GR+ DA +L+ M GC P+ Y +++ RA+
Sbjct: 323 IVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 101/236 (42%), Gaps = 3/236 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + G L+ FR M K + Y +L+ + + A EL E
Sbjct: 426 YNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEML 482
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
++ F LV + ++G +E+ +E+VE M + +++G +K +
Sbjct: 483 RGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSE 542
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+++ L+S+G P +T++SII + +A ++F +Q G V Y+ ++
Sbjct: 543 DALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKIL 602
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISA 298
K I +A+ A M GC PN Y L++ L++ + +V+ +
Sbjct: 603 LGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCS 658
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 91/213 (42%), Gaps = 7/213 (3%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
ILC + G + + M E G Y +L+ F + A ELF+ K
Sbjct: 397 ILC----QKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK 452
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ + L+ ++ E+V M + + V+V+ F ++ A
Sbjct: 453 P---NTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEA 509
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+++ EQ++ GC P +TY ++++ + A ++ + KG V+ +SS++ +
Sbjct: 510 IELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGI 569
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K RI +A++L ++ G P +YN ++
Sbjct: 570 LSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKIL 602
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P TY +I C G + A + +M ++G VV Y+ ++ + AM +
Sbjct: 141 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAV 200
Query: 258 VAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
+ +M+ KGC PN+ YN +++ GR + R+L
Sbjct: 201 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREL 235
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 73/174 (41%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + +L + G E ++ M E G + Y +L+ + A E
Sbjct: 487 PPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALE 546
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L KG+ D+ F ++ + +E +E+ +++ +++ + + I+ G
Sbjct: 547 LLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLC 606
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
KR A+ + ++S GC+P + TY +I GL +A+ + + +G
Sbjct: 607 KRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRG 660
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 128/275 (46%), Gaps = 3/275 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
L++++K+ + G LD Y ++ K+G L + + L + MY
Sbjct: 157 HQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGK---LVQPNAVMY 213
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ D++ K+ + + M K I D SLI F + ++K A L +
Sbjct: 214 NMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMIL 273
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
+ + + F LV + +EG V++ ++ ++ + +++G+ +
Sbjct: 274 ENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINK 333
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A +++ + S+G I +Y ++IN C+I + +A +F EM+ + VV Y+S++
Sbjct: 334 AKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLID 393
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
GK G+I ++LV +M +G PN+ YNS++D
Sbjct: 394 GLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILD 428
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
F M +G++ + Y ++I I V A LF+E + ++ ++ + L+ +
Sbjct: 338 FDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGK 397
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
G + L++V+ M + + I++ K A+ + L QG P T
Sbjct: 398 LGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYT 457
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y +I C+ G A+KVF ++ KG++ V Y+ M+ + G A+ L++KM+
Sbjct: 458 YTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKME 517
Query: 263 PKGCEPNVWIY 273
GC PN Y
Sbjct: 518 DNGCIPNAKTY 528
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 3/222 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ M S G++ + Y ++ KI ++ LF E RK+ P+ Y L D
Sbjct: 338 FDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKI--IPNVV-TYNSLIDG 394
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
LGK G+ +LK +M ++G + Y S++ + V A L +++G+ D
Sbjct: 395 LGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPD 454
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + L+ + G +E +V E + N+ V++ GF + + AA+ +
Sbjct: 455 MYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLS 514
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ GCIP TY +I + AEK+ EM +G
Sbjct: 515 KMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/316 (18%), Positives = 127/316 (40%), Gaps = 38/316 (12%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
+ + L +++M+ GIV D + ++ F ++G + ++F + + D P++
Sbjct: 85 HHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFD--PNAI- 141
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ L L G + L F + +G D Y +LI + + A +L K
Sbjct: 142 TFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV 201
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ K + + ++ ++ + +V ++ M ++ D ++ GF
Sbjct: 202 DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQL 261
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY------------------------- 216
AV + ++I + P T++ +++A+C+ G
Sbjct: 262 KEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSL 321
Query: 217 ----------SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
+KA+ +F M +G V +Y++M+ K + +A+ L +M+ +
Sbjct: 322 MDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKI 381
Query: 267 EPNVWIYNSLMDMHGR 282
PNV YNSL+D G+
Sbjct: 382 IPNVVTYNSLIDGLGK 397
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 125/303 (41%), Gaps = 17/303 (5%)
Query: 56 TPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAE 115
TP KIL SL K+ L + M+ GI+ D + LI F+ + ++
Sbjct: 67 TPPIIQFNKIL-SSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSF 125
Query: 116 ELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGF 175
+F + +KG + F L+ +G + + L + + ++ ++NG
Sbjct: 126 SVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGL 185
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
K AA+++ +++ + P V Y II+ C+ L + A ++ +M K
Sbjct: 186 CKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDD 245
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQL--- 289
+S++ + G++++A+ L+ KM + P ++ ++ L+D G+ K + +
Sbjct: 246 FTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGV 305
Query: 290 ----------EKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQ 339
Y +++ Y + +E + ++ G + + M+ K+
Sbjct: 306 TMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKM 365
Query: 340 IEE 342
++E
Sbjct: 366 VDE 368
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 9/272 (3%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD- 68
YE+M + GI+ D Y ++ A+ K G ++ E E + Y L D
Sbjct: 244 YEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMER---SCCEPNVVTYNSLIDG 300
Query: 69 --SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
SLG A ++L M EKGI E+ Y LI + +++ AE+LF EK +
Sbjct: 301 YVSLGDVCGAKKVLAL---MSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNL 357
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D V+ L+ Y G V+ L + ++M L ++ I ++NG+ K A +
Sbjct: 358 FVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAE 417
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V + P Y ++++ +C+ + KA K+ EM KG + VV Y++++
Sbjct: 418 VLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLF 477
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G + A+ + M +G PN Y +L+D
Sbjct: 478 HVGHVEHALHIWNLMHKRGVAPNEVTYCTLLD 509
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 115/256 (44%), Gaps = 9/256 (3%)
Query: 25 YCQIMEAFYKIGD---SEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILK 81
Y +++ + +GD ++KV AL E P ++ Y +L K G+ + K
Sbjct: 294 YNSLIDGYVSLGDVCGAKKVLALMSE------KGIPENSRTYTLLIKGYCKRGQMEQAEK 347
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
F M EK + D VY LI ++ + V A + + G+ + + L+ Y
Sbjct: 348 LFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYC 407
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
+ G V K EV+ SMK+ L +++GF K+ + A K+ +++ ++G V
Sbjct: 408 KLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVV 467
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
TY +++ +G A ++ M ++G V Y +++ + K G AM +
Sbjct: 468 TYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDA 527
Query: 262 KPKGCEPNVWIYNSLM 277
KG ++ +YN+++
Sbjct: 528 LSKGFTKSITLYNTMI 543
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
L +L ++G AF+ L + M GIL D Y ++ ++ V A KE E
Sbjct: 227 LLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSC 286
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
++ + L+ Y+ G V +V+ M + + +++ G+ KR A
Sbjct: 287 CEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAE 346
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
K++ ++ + + Y +I+AYC G A ++ M + G V +S++ Y
Sbjct: 347 KLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGY 406
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G + A ++ MK +P+ + YN+L+D
Sbjct: 407 CKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLD 439
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 18/228 (7%)
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQ 190
VF ++ +Y E+GM + L V ++M + SC +++ + + A+ VYEQ
Sbjct: 188 VFDMILKVYAEKGMTKFALCVFDNMGKCG-RVPSLRSCNSLLSNLVQNGEAFKALLVYEQ 246
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+I+ G +P +Y ++NAYC+ G +A EM++ + VV Y+S++ Y G
Sbjct: 247 MIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGD 306
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
+ A +++A M KG N Y L+ + + + Q EK Y
Sbjct: 307 VCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGV 366
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+I AY A D ++ + G ++ + ++ + KL + +
Sbjct: 367 LIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNK 414
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 24/238 (10%)
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYA--SLICSFASIAEVKVAEELFKEAEEKG 125
D++GK GR PS+ + SL+ + E A ++++ G
Sbjct: 210 DNMGKCGRV------------------PSLRSCNSLLSNLVQNGEAFKALLVYEQMIALG 251
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDCISCVIVNGFSKRRAYWA 183
+L D+ + +V Y +EG V++ V+ M+ + E N+ S +++G+
Sbjct: 252 ILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNS--LIDGYVSLGDVCG 309
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A KV + +G TY +I YC+ G +AEK+F M +K Y ++
Sbjct: 310 AKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIH 369
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM 301
Y GR+ DA+R+ M G + N I NSL++ + + ++ + + + +N+
Sbjct: 370 AYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNL 427
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 160 ELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKA 219
E + S + +I+ ++++ A+ V++ + G +P + S+++ + G KA
Sbjct: 181 EFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKA 240
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V+ +M G + +Y+ MV Y K GR+ +A V +M+ CEPNV YNSL+D
Sbjct: 241 LLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLID 299
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 62 MYKILCDSL-------GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
M ++C+SL G +A E+L MK+ + D Y +L+ F + A
Sbjct: 394 MNTVICNSLINGYCKLGHVNKAAEVLV---SMKDWNLKPDSYGYNTLLDGFCKQEDFIKA 450
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+L E KG+ + + L+ G VE L + M + ++ C +++
Sbjct: 451 FKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDA 510
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
F K + A+ +++ +S+G Y ++I +C++ +A+++F++M++
Sbjct: 511 FFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564
>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 426
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 141/302 (46%), Gaps = 17/302 (5%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R+ L+P + Y L GK G L + + M++ + D +Y++LI + +
Sbjct: 1 RERALSPDR-YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 59
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
A +F + G DL + ++ ++ + + + ++ M+ A + +
Sbjct: 60 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYST 119
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ + + + + A+ V+ ++ C+ T +I+ Y ++G+ +A+K+F M++ G
Sbjct: 120 LLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 179
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------RAK 284
+ VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G +A
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239
Query: 285 NL------RQLEK----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
NL R +E Y+T+IS + + D + + R +G ID+ + M+ +
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 335 SK 336
+
Sbjct: 300 ER 301
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 125/279 (44%), Gaps = 3/279 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L + +KM+ + D Y ++E K+ D K ++F ++ TP Y
Sbjct: 27 AALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF--SRLKRSGFTPDLV-AYN 83
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ + GK+ E +M+ G+ + Y++L+ + + A +F E E
Sbjct: 84 AMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLTMYVENKKFLEALSVFAEMREI 143
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
L DL ++ +Y + GM ++ ++ M+ + + ++ + + A
Sbjct: 144 KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEA 203
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ + + VTY S++ Y + + KA + EMQ +G + + YS+++++
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISI 263
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+GK G++ A L K++ G + + +Y +++ + RA
Sbjct: 264 WGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERA 302
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 149/333 (44%), Gaps = 30/333 (9%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK--LDLTPSSTHMYKILCDS 69
+M++AG+ + Y ++ + + + ++F E K LDLT + I+ D
Sbjct: 104 EMRTAGVTPTTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCN-----IMIDV 158
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ G A E K F M++ GI + Y +L+ + A LF+ + K + ++
Sbjct: 159 YGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++++Y + EK +++ M+N + + I++ + K A +++
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L S G QV Y ++I AY R GL + A+++ E+++ +A + + G
Sbjct: 279 KLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIA----IHILAGAG 334
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
RI +A W++ +D G K++ E+ + S Y +++ V
Sbjct: 335 RIEEA---------------TWVFRQAIDA-GEVKDITVFERMIHLFSKY---KKYGNVV 375
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +++ R G D + +++ + KL + ++
Sbjct: 376 EVFDKMRGLGYFPDSNVIALILNAYGKLHEFDK 408
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+H + M+ I + Y +M + K + EK L E ++R ++ P+S Y +
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE--PNSI-TYSTI 260
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK-G 125
GK G+ F+ ++ G+ D +Y ++I ++ V A+ L E +
Sbjct: 261 ISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ RD+ + + G +E+ V +A + +++ FSK + Y V
Sbjct: 321 IPRDIAIHI-----LAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVV 375
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+V++++ G P A I+NAY ++ + KA V++EMQ+ G
Sbjct: 376 EVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEVG 420
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
++M+ +GI + Y+++I + + ++ A LF++ G+ D ++ +++ Y
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-RRAYWAAVKVYEQLISQGCIPG 199
G+V ++ +K + NI I+ I+ G + A W V+ Q I G +
Sbjct: 300 ERAGLVAHAKRLLHELKRPD-NIPRDIAIHILAGAGRIEEATW----VFRQAIDAGEVKD 354
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMRL 257
+ +I+ + + Y +VF +M+ G+ D V+A ++ YGK A +
Sbjct: 355 ITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIAL--ILNAYGKLHEFDKANDV 412
Query: 258 VAKMKPKGC 266
+M+ GC
Sbjct: 413 YMEMQEVGC 421
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M++ GI +S Y I+ + K+G ++ A LF + S +D+ +Y+ + +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQV---LYQTMIVAY 299
Query: 71 GKSGRAFEILKFFRDMKEK-GILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
++G + ++K I D +++ A ++ A +F++A + G ++D
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIHI-----LAGAGRIEEATWVFRQAIDAGEVKD 354
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ VF +++ ++ + +EV + M+ + +I+N + K + A VY
Sbjct: 355 ITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYM 414
Query: 190 QLISQGCI 197
++ GC+
Sbjct: 415 EMQEVGCV 422
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 150/368 (40%), Gaps = 60/368 (16%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M++ GI S Y ++ A+ D E+ + + +++T + Y I+
Sbjct: 307 FESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVT---YSIIVGG 363
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G A +F + KEK + +Y +I + I + AE L +E EE+G+
Sbjct: 364 FAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAP 423
Query: 130 LEVF----------------------LK-------------LVLMYIEEGMVEKTLEVVE 154
++++ LK L+ +Y + G V K LE+ +
Sbjct: 424 IDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISK 483
Query: 155 SMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
MK + + + +++NGF K + + A V+E G P V Y +II A+C +G
Sbjct: 484 MMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMG 543
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+A + +MQ++ + ++ + + G +R A+ + M+ GC P V YN
Sbjct: 544 NMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYN 603
Query: 275 SL-------------------MDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEF 315
+L M++ G N YTT++ Y + + +++
Sbjct: 604 ALILGLVEKRQMTKAVAILDEMNVAGVGPNEHT---YTTLMQGYASLGDTEKAFQYFTVL 660
Query: 316 RMNGGVID 323
R G ID
Sbjct: 661 RNEGLEID 668
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 117/254 (46%), Gaps = 3/254 (1%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
+ I+ F + G+ + +F R+ P+ H Y L L + + + +
Sbjct: 566 TFLPIIHGFARAGEMRRALEIFDMM--RRSGCIPT-VHTYNALILGLVEKRQMTKAVAIL 622
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+M G+ + Y +L+ +AS+ + + A + F +G+ D+ + L+ +
Sbjct: 623 DEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKS 682
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G ++ L V + M + + + ++++G+++R W A + +Q+ +G +P TY
Sbjct: 683 GRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTY 742
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
S INA C+ G KA ++ EM+ G + Y++++ + + A+ +MK
Sbjct: 743 TSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKL 802
Query: 264 KGCEPNVWIYNSLM 277
G +P+ +Y+ L+
Sbjct: 803 AGFKPDKAVYHCLV 816
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/330 (19%), Positives = 142/330 (43%), Gaps = 19/330 (5%)
Query: 13 MKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK 72
MK +GI + Y ++ F K+ D ++F + K L P +Y + +
Sbjct: 485 MKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFT--KDGLKPDVV-LYNNIITAFCG 541
Query: 73 SGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEV 132
G + R M+++ + +I FA E++ A E+F G + +
Sbjct: 542 MGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHT 601
Query: 133 FLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLI 192
+ L+L +E+ + K + +++ M A + ++ ++ G++ A + + L
Sbjct: 602 YNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLR 661
Query: 193 SQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
++G TY +++ + C+ G A V EM K + Y+ ++ + + G +
Sbjct: 662 NEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVW 721
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ----------------LEKYTTVI 296
+A L+ +M+ +G P++ Y S ++ +A ++++ L+ YTT+I
Sbjct: 722 EAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLI 781
Query: 297 SAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
+ + A + + + E ++ G D+A+
Sbjct: 782 NGWARASMPEKALSCFEEMKLAGFKPDKAV 811
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 135/311 (43%), Gaps = 19/311 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y +++ + + GD F +R ++ S+H+Y L + E L R
Sbjct: 287 YGLMVKYYGRRGDMHHARQTFESMRARGIE---PSSHVYSSLIHAYAVGRDMEEALHCVR 343
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
MKE+GI Y+ ++ FA + A+ F+EA+EK + ++ ++ + +
Sbjct: 344 KMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQIC 403
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
+++ +V M+ ++ I +++G++ + V+++L G P ++Y
Sbjct: 404 NMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYG 463
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+IN Y ++G SKA ++ M+ G + YS ++ + K +A +
Sbjct: 464 CLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKD 523
Query: 265 GCEPNVWIYNSLMDMHGRAKNL-------RQLEK---------YTTVISAYNMAREFDMC 308
G +P+V +YN+++ N+ RQ++K + +I + A E
Sbjct: 524 GLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRA 583
Query: 309 VKFYNEFRMNG 319
++ ++ R +G
Sbjct: 584 LEIFDMMRRSG 594
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
W AV + I + P + Y ++ Y R G A + F M+ +G + YSS+
Sbjct: 269 WQAVVTAFERIKK---PARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSL 325
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ Y + +A+ V KMK +G E + Y+
Sbjct: 326 IHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYS 358
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 114/268 (42%), Gaps = 42/268 (15%)
Query: 14 KSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS---L 70
+S GI D + +++A K + K A+L E R P Y L D +
Sbjct: 167 RSHGIAQDLPLFNSLLDALVKSRRASKAASLVRALEQR----FPPDAVTYNTLADGWCRV 222
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ RA +IL R M E GI + Y ++ F +++ A + F + + +G
Sbjct: 223 KDTSRALDIL---RQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRG----- 274
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYE 189
N E D +S +++G A KV++
Sbjct: 275 --------------------------SNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFD 308
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ +GC P TY ++I C+ G A VF +M +KG+ VV Y+ ++ G
Sbjct: 309 EMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAG 368
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++ AM+L+ +MK +GCEPNV YN L+
Sbjct: 369 KVVRAMKLLDRMKSEGCEPNVQTYNVLI 396
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 15/236 (6%)
Query: 4 QSKLHYYEKMKSAGIVLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTP 57
Q ++ +MK G D C Y ++ G +K +F E ++
Sbjct: 261 QHAWDFFLQMKRRGSN-DENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMS---IEGCK 316
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
ST Y L K G + + F DM KG + + Y LI +V A +L
Sbjct: 317 PSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKL 376
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAE--LNISDCISCVIVNGF 175
+ +G +++ + L+ +EEG +EK L++ E+M E L D + +I F
Sbjct: 377 LDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSKGEECLPNQDTYNIIISAMF 436
Query: 176 SKRRAYWAAV--KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++RA AV ++ +++ +G +P + + ++N G + + + MQ+K
Sbjct: 437 VRKRAEDMAVAARMVVEMVDRGYLPRKFMFNRVLNGLMLTG-NQELSRELLRMQEK 491
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
RRA AA V + + Q P VTY ++ + +CR+ S+A + +M + G
Sbjct: 189 RRASKAASLV--RALEQRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKAT 246
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKG-----CEPNVWIYNSLMDMHGRAKNLRQLEKY 292
Y+ ++ + ++G+++ A +MK +G C+P+V Y
Sbjct: 247 YNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVV-------------------SY 287
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
TTV+ +A + D K ++E + G A ++ V K +E+
Sbjct: 288 TTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLED 337
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 126/271 (46%), Gaps = 3/271 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+ + +M + GI + Y I+ F +G S + +LF + R ++ P T + IL
Sbjct: 137 MEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVER--NVMPD-TVTFNIL 193
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K G E F M EKG+ + + Y +L+ + S +++ A++LF KG
Sbjct: 194 VDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGC 253
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + + G +++ ++ M + L ++ GF + A K
Sbjct: 254 APSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQK 313
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ E++ S G +P +TY+ +++ C+ G +A ++ MQ+ + + Y+ ++
Sbjct: 314 LLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMC 373
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G++ A L + + KG +P+V Y ++
Sbjct: 374 NFGKLEAARELFSNLFVKGIQPDVVTYTVMI 404
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 115/232 (49%), Gaps = 1/232 (0%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
KL L P+ + L + L + + +K F +M + G D Y+++I +
Sbjct: 40 KLGLQPNHV-TFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGST 98
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
+A +L K+ EEKG ++ V+ ++ ++ ++ + +E + M N ++ + I
Sbjct: 99 TMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSI 158
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++GF A +++Q++ + +P VT+ +++ + G+ +A+ VF M +KG
Sbjct: 159 LHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGV 218
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ V Y++++ Y ++ +A +L M KGC P+V YN L+ H ++
Sbjct: 219 EPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKS 270
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 122/283 (43%), Gaps = 41/283 (14%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+++M G D Y I+ K+G + L + E + + +Y + DS
Sbjct: 70 FDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKG---CKPNVVVYSTIIDS 126
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K E ++F +M +GI + Y+S++ F ++ A LFK+ E+ ++ D
Sbjct: 127 LCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPD 186
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
F ++V+G SK A V+E
Sbjct: 187 TVTF-----------------------------------NILVDGLSKEGMILEAQCVFE 211
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+I +G P TY ++++ YC +A+K+F M +KG V +Y+ ++ + K+G
Sbjct: 212 TMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSG 271
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
RI +A L+A+M K P+ Y++LM GR ++ ++L
Sbjct: 272 RIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKL 314
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 124/273 (45%), Gaps = 3/273 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+E M G+ + Y +M+ + ++ LF RK PS Y IL
Sbjct: 210 FETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF-NIMVRK-GCAPS-VRSYNILIKG 266
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
KSGR E +M K + D Y++L+ F + A++L +E G+L D
Sbjct: 267 HCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPD 326
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
L + ++ ++G +++ E++++M+ +++ + I +++ G AA +++
Sbjct: 327 LMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFS 386
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
L +G P VTY +I+ + GL ++A ++F +M G Y+ ++ + + G
Sbjct: 387 NLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNG 446
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
+A RL+ +M +G + + L D+ R
Sbjct: 447 DTSNAGRLIEEMVGRGFSADSSTFQMLSDLESR 479
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M + G D Y ++ K GD + +L + E K++ + +Y + D+L
Sbjct: 193 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE---ADVVIYTTIIDAL 249
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ L F +M KGI + Y SLI + A L + E+ + ++
Sbjct: 250 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 309
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +++EG + + ++ + M ++ ++NGF A ++E
Sbjct: 310 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 369
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+IS+ C P VTY ++I +C+ + ++F EM Q+G V Y++++ + G
Sbjct: 370 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 429
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A ++ KM G P++ Y+ L+D
Sbjct: 430 CDMAQKIFKKMVSDGVPPDIITYSILLD 457
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 123/276 (44%), Gaps = 3/276 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L+ + +M + GI + Y ++ G + L + RK++ +
Sbjct: 254 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN---PNVV 310
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ L D+ K G+ E K + +M ++ I D Y+SLI F + A+ +F+
Sbjct: 311 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 370
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
K ++ + L+ + + VE+ +E+ M L + ++ G +
Sbjct: 371 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 430
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K++++++S G P +TY+ +++ C+ G KA VF +Q+ + + Y+ M
Sbjct: 431 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 490
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ K G++ D L + KG +PNV IY +++
Sbjct: 491 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 526
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 126/301 (41%), Gaps = 16/301 (5%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+T + L L +A E + M +G D Y +++ ++ +A L
Sbjct: 167 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 226
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
K+ E+ + D+ ++ ++ V L + M N + + ++
Sbjct: 227 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 286
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ +I + P VT++++I+A+ + G +AEK++ EM ++ D +
Sbjct: 287 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 346
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLE 290
YSS++ + R+ +A + M K C PNV YN+L+ +AK + R++
Sbjct: 347 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 406
Query: 291 K---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ Y T+I A + DM K + + +G D I++ K ++E
Sbjct: 407 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 466
Query: 342 E 342
+
Sbjct: 467 K 467
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 97/203 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L K+ R E ++ FR+M ++G++ + Y +LI + +A+++FK+
Sbjct: 382 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 441
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ + L+ + G +EK L V E ++ +++ +++ G K
Sbjct: 442 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 501
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ L +G P + Y ++I+ +CR GL +A+ +F EM++ G Y++++
Sbjct: 502 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 561
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ G + L+ +M+ G
Sbjct: 562 RARLRDGDKAASAELIKEMRSCG 584
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 4/229 (1%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
+SR L PS K+L ++ K + ++ M+ I D Y LI F
Sbjct: 57 QSRPL---PSIVEFNKLL-SAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRR 112
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+++ +A + + + G D+ L+ Y + + + +V+ M E +
Sbjct: 113 SQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTF 172
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++G AV + ++++++GC P TY +++N C+ G A + +M++
Sbjct: 173 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 232
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ VV Y++++ + DA+ L +M KG PNV YNSL+
Sbjct: 233 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A +LF E + L + F KL+ + + + + E M+N ++ +++N
Sbjct: 48 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 107
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
F +R A+ V +++ G P VT +S++N YC S+A + +M +
Sbjct: 108 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 167
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNL 286
V +++++ + +A+ L+ +M +GC+P+++ Y +++ D+ L
Sbjct: 168 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 227
Query: 287 RQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
+++EK YTT+I A + + + + E G
Sbjct: 228 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 269
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++KM S G+ D Y +++ K G EK +F + K++ + Y I+ +
Sbjct: 437 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME---PDIYTYNIMIEG 493
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K+G+ + F + KG+ + +Y ++I F + A+ LF+E +E G L +
Sbjct: 494 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 553
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+ L+ + +G + E+++ M++
Sbjct: 554 SGTYNTLIRARLRDGDKAASAELIKEMRS 582
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 105/221 (47%), Gaps = 3/221 (1%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++T + I+ +S+ K GR + +F +M G D Y +++ + A+EL
Sbjct: 310 ANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKEL 369
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E K + F + + ++G++++ + ++E M ++ +VNGF
Sbjct: 370 LNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCV 429
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ +A++++ L C P +TY +++ C A ++ EM Q VV
Sbjct: 430 QGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVT 486
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +V+ + + G + +A+ LV +M GC PN+ +N+L+D
Sbjct: 487 FNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLD 527
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 129/307 (42%), Gaps = 14/307 (4%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
E R TP+ Y ++ + + + R + + + G D Y +++ +
Sbjct: 197 EMRAKGCTPNIV-TYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAA 255
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+ E LF E E + + F LV + GMVE+ +EV++ M + +
Sbjct: 256 KRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLC 315
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++N K+ A + + S GC P ++Y +++ CR G + A+++ EM +
Sbjct: 316 NIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVR 375
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKN 285
K V +++ + + + G I A+ L+ +M GC + YN+L++ + GR +
Sbjct: 376 KNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDS 435
Query: 286 LRQLEK----------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFS 335
+L YTT+++ A D + E N ++ ++V F
Sbjct: 436 ALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFC 495
Query: 336 KLSQIEE 342
+ +EE
Sbjct: 496 QKGFVEE 502
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 97/255 (38%), Gaps = 3/255 (1%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+L + GR + + R + G D Y +L+ + + A L +
Sbjct: 79 NLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPP 135
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
D + L+ + G V L +++ M E S V++ K + A+KV
Sbjct: 136 DAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVL 195
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+++ ++GC P VTY IIN CR A ++ + GF V+Y++++
Sbjct: 196 DEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAA 255
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMC 308
R D L +M C PN ++ L+ R + + + +S + +C
Sbjct: 256 KRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLC 315
Query: 309 VKFYNEFRMNGGVID 323
N G V D
Sbjct: 316 NIVINSICKQGRVDD 330
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 90/228 (39%), Gaps = 2/228 (0%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + Y L L GR + L DM + Y L+ + + A +
Sbjct: 134 PPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMK 193
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+ E KG ++ + ++ E V+ +++ + + ++ G
Sbjct: 194 VLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLC 253
Query: 177 KRRAYWAAVKV-YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
+ W V+V + +++ C+P +VT+ ++ +CR G+ +A +V M + G
Sbjct: 254 AAK-RWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANT 312
Query: 236 VAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+ ++ K GR+ DA + M GC P+ Y +++ RA
Sbjct: 313 TLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRA 360
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 122/298 (40%), Gaps = 9/298 (3%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ M S G D+ Y +++ + G E L E RK + P+ +C
Sbjct: 334 FLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNE-MVRK-NCPPNEVTFNTFIC- 390
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE-EKGML 127
L + G + + M E G Y +L+ F V A ELF E +
Sbjct: 391 ILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTI 450
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
+ L+ ++ E++ M + ++ V+V+ F ++ A+++
Sbjct: 451 ----TYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIEL 506
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+Q++ GC P +T+ ++++ +A ++ + KG + YSS+V + +
Sbjct: 507 VQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSR 566
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-MHGRAKNLRQLEKYTTVISAYNMARE 304
RI +A+++ ++ G P +YN ++ + R + R ++ + ++S M E
Sbjct: 567 EDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNE 624
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 94/226 (41%), Gaps = 3/226 (1%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L + GR L+ F + + + Y +L+ + A EL E
Sbjct: 420 YNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMM 476
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ ++ F LV + ++G VE+ +E+V+ M + +++G ++
Sbjct: 477 QNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSE 536
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+++ L+S+G +TY+SI++ R +A ++F +Q G V Y+ ++
Sbjct: 537 EALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKIL 596
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ K A+ A M C PN Y L++ R L++
Sbjct: 597 SALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKE 642
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A ++ E+ S+G P +I CR G S A +V + G V AY+++VA
Sbjct: 54 AARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVA 113
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN----------------SLMDMHGRAKNLR 287
Y + GR+ A RL+A M P+ + Y SL+D R +
Sbjct: 114 GYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQP 170
Query: 288 QLEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
+ YT ++ A + F +K +E R G
Sbjct: 171 SVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKG 202
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 73/174 (41%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + +L + G E ++ + M E G + + +L+ + A E
Sbjct: 481 PLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALE 540
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L KG+ D + +V + E +E+ +++ ++++ + + I++
Sbjct: 541 LLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALC 600
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
KR A+ + ++S C+P + TY +I R GL +A V E+ +G
Sbjct: 601 KRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRG 654
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 148/336 (44%), Gaps = 23/336 (6%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLT--PSSTHMYKILCDSLGKSGRAFEILKF 82
Y + K+G+ E AAL L R L T P ++H + + K G FE L+
Sbjct: 359 YSTYIHGLCKVGNVE--AALML---IRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQV 413
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
+MK GIL D Y+ LI +F +V +L +E E + + + L+ +
Sbjct: 414 LEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCK 473
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
+ M++ +++ S+ + + +++GF + +A+K+ E++I +P +
Sbjct: 474 KNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFS 533
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
S+I Y ++GL+ +A +VF M + G +A + ++ + G ++A+ L+ +
Sbjct: 534 CRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQ 593
Query: 263 PKGCEPNVWIYNSLM------DMHGRAKNL--RQLEK--------YTTVISAYNMAREFD 306
G N YN+++ RA L R L++ Y+T+IS + F
Sbjct: 594 EHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFK 653
Query: 307 MCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
V + G + A I++ +FS ++ E
Sbjct: 654 RAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHE 689
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 114/270 (42%), Gaps = 3/270 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + M GI D+ I++ + G ++ L + + +L P H Y +
Sbjct: 551 LEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNP---HSYNAI 607
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L K G L+ M ++ +L Y++LI FA + K A LF + G+
Sbjct: 608 IYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGI 667
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
++ + L+ ++ + + + + MK L + ++ GF R A
Sbjct: 668 TFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWA 727
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
++E++ +GC P +TY II+ +C+ A VF +M + VV Y+ ++ Y
Sbjct: 728 LFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYH 787
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
K G A +L MK KG P+ +N L
Sbjct: 788 KHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 138/343 (40%), Gaps = 19/343 (5%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q+ + + + ++ DS Y +++ F GD + L E +L T S
Sbjct: 478 QNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSC--- 534
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+ L K G + L+ F M GI D ++ K A L ++ +E
Sbjct: 535 RSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQE 594
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G + + ++ +EG E+ LE++ M + S +++GF+K+ +
Sbjct: 595 HGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKR 654
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
AV ++ +++ G TY +++ + +A +F EM+++G ++Y++++
Sbjct: 655 AVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIV 714
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMH----------------GRAKNLR 287
+ ++ A L +M +GC PNV Y ++D R +
Sbjct: 715 GFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIP 774
Query: 288 QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIM 330
+ YT +I Y+ FD K Y+ + G + D ++
Sbjct: 775 DVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 142/352 (40%), Gaps = 21/352 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L E+MKS+GI+ D Y ++ AF GD K L E E ++ + S Y L
Sbjct: 411 LQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVS---YTSL 467
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L K + F + D +VY +LI F ++ A +L +E +
Sbjct: 468 IHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNEL 527
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA-AV 185
+ L+ Y + G+ ++ LEV +M + D I+C + S R Y+ A+
Sbjct: 528 VPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGI-WPDTIACNYILDGSCRAGYFKEAL 586
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ E G +Y +II C+ G +A ++ M ++ VV YS++++ +
Sbjct: 587 TLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGF 646
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ--------------LEK 291
K + A+ L +M G N+ Y LM + + + + L++
Sbjct: 647 AKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQ 706
Query: 292 --YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
YTT+I + RE + E G + ++ F K ++I+
Sbjct: 707 ISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRID 758
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 14/155 (9%)
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDC---ISCVIVNGFSKRRAYWAAVK 186
VF L+ ++ M+E L+V + K+ E +I C + C++ R + +
Sbjct: 249 VFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLV----EANRVEFVR-R 303
Query: 187 VYEQLISQGCIPGQVTYASIINAYCR-IGLYS---KAEKVFIEMQQKGFDKCVVAYSSMV 242
V+E+L +G P TY ++N YC +G + +A + ++ + G VV YS+ +
Sbjct: 304 VFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYI 363
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
K G + A+ L+ + N +N ++
Sbjct: 364 HGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVI 398
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M++ G + Y ++ K GD EK+ +LFLE RK +P+ +Y + D+L
Sbjct: 1207 EMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM--RKRGFSPN-VQIYNSVIDALC 1263
Query: 72 K---SGRAFEILK--------------------------------FFRDMKEKGILEDPS 96
K + +A ILK F R+ + + +
Sbjct: 1264 KCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQL 1323
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
Y LI F E+ VA +L E +G D+ F L+ + G V + L V E M
Sbjct: 1324 SYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKM 1383
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
++ I V+++G K+R AA + E+++ + P + YA++I+ + R
Sbjct: 1384 TERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENL 1443
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
A K+F M+ KG +V+ ++M+ Y + G + +A+ ++ M+ GC P+ + Y ++
Sbjct: 1444 GDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTV 1503
Query: 277 MDMHGRAKNL 286
+ + + NL
Sbjct: 1504 ISGYAKQGNL 1513
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK-GMLRDLEVFLKLVLMYI 141
+ M G + +L+ ++A + A ++ + E+ G L ++ +L+ + +
Sbjct: 1064 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLV 1123
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
E+ + ++ + M + + +CV+V G R +K+ E GCIP V
Sbjct: 1124 EQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVV 1183
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
Y +I+ YCR G + + EM+ KGF +V Y S++ GK G + L +M
Sbjct: 1184 FYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1243
Query: 262 KPKGCEPNVWIYNSLMD 278
+ +G PNV IYNS++D
Sbjct: 1244 RKRGFSPNVQIYNSVID 1260
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
++Y +L L K +M EK + D VYA+LI F + A ++F+
Sbjct: 1393 NIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEF 1452
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
E KG+ D+ ++ Y + GM+ + + + +M+ + +++G++K+
Sbjct: 1453 MEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 1512
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A++ +I + C P VTY+S+IN YC+ G AE +F MQ + VV Y+
Sbjct: 1513 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTI 1572
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPN 269
++ K ++ A M C PN
Sbjct: 1573 LIGSLFKKDKVLRAGLYFETMLLNHCSPN 1601
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 5/254 (1%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ F G+ + L +E R TP + L L +G+ E L
Sbjct: 1325 YTPLIHGFCMRGELMVASDLLVEMMGR--GHTPDVV-TFGALIHGLVVAGKVSEALIVRE 1381
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
M E+ + D ++Y LI + A+ + +E EK + D V+ L+ +I
Sbjct: 1382 KMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSE 1441
Query: 145 MVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
+ ++ E M++ + D +SC ++ G+ + A+ + GCIP + TY
Sbjct: 1442 NLGDARKIFEFMEHKGI-CPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTY 1500
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
++I+ Y + G + A + +M ++ VV YSS++ Y KTG A L A M+
Sbjct: 1501 TTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQA 1560
Query: 264 KGCEPNVWIYNSLM 277
+ PNV Y L+
Sbjct: 1561 EALSPNVVTYTILI 1574
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 123/285 (43%), Gaps = 3/285 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L E AG + Y +++ + + GD + L E E++ T + Y L
Sbjct: 1167 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVT---YGSL 1223
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ LGK G +I F +M+++G + +Y S+I + A + K+ G
Sbjct: 1224 INWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGC 1283
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D+ F L+ EG V K + ELN + +++GF R A
Sbjct: 1284 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASD 1343
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ +++ +G P VT+ ++I+ G S+A V +M ++ V Y+ +++
Sbjct: 1344 LLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC 1403
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
K + A ++ +M K +P+ ++Y +L+D R++NL K
Sbjct: 1404 KKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARK 1448
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 2/207 (0%)
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
R E LK G + Y LI + ++ L E E KG L L +
Sbjct: 1162 RVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYG 1221
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
L+ ++G +EK + M+ + + I +++ K R+ A+ + +Q+ +
Sbjct: 1222 SLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFAS 1281
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
GC P +T+ ++I C G KAE E ++ + ++Y+ ++ + G + A
Sbjct: 1282 GCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVA 1341
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHG 281
L+ +M +G P+V + +L +HG
Sbjct: 1342 SDLLVEMMGRGHTPDVVTFGAL--IHG 1366
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 6/276 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y++M AGI D Y ++ A + G E+ LF E E+ LD P Y L +
Sbjct: 482 YKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMEN--LDCRPDELS-YSSLLHA 538
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ + ++ D+ + I + +L+ + + + E+ F E + D
Sbjct: 539 YANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLD 598
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ V +V +Y + MV+K E++ MK + +N+S +++ +S+ +
Sbjct: 599 INVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILT 658
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
++ S G P + +Y ++I AY R G +A ++F EM+ G +V Y+ V Y
Sbjct: 659 EIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANS 718
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGR 282
+A+ LV M +GC+PN YNS++ HG+
Sbjct: 719 MFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGK 754
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 133/312 (42%), Gaps = 19/312 (6%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+ MK+ GI LD Y ++ + ++ A +F E R P + L D
Sbjct: 238 DSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEM--RAAGFEPDKV-TFNSLLDVY 294
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
GK+ E + ++M+ G Y SLI S+ +K A EL +E E KG+ D+
Sbjct: 295 GKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDV 354
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ G ++ + + M + C ++ R + + V++
Sbjct: 355 ITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDD 414
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
L S G +P VT+ +++ + + GL S+ VF EM++ G+ Y S+++ Y + G
Sbjct: 415 LRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGL 474
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTT 294
+M + +M G P++ YN+++ R Q EK Y++
Sbjct: 475 FDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSS 534
Query: 295 VISAYNMAREFD 306
++ AY A++ D
Sbjct: 535 LLHAYANAKKLD 546
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 128/291 (43%), Gaps = 5/291 (1%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEK-VAALFLECESRKLDLTPSSTHMYKILCD 68
+ +M + GI Y ++ + KI K V AL +S K D P + Y L
Sbjct: 201 FRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVAL---VDSMKNDGIPLDRYTYNTLIS 257
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
+ E K F +M+ G D + SL+ + A + KE E G
Sbjct: 258 CCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGGCPP 317
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + L+ Y+++G++++ E+ E M+ + +++G + AA+ Y
Sbjct: 318 SVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTY 377
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
++++ GC P TY ++I + G + + VF +++ GF VV +++++A++G+
Sbjct: 378 DEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQN 437
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ-LEKYTTVISA 298
G + + +MK G P Y SL+ + R Q +E Y +I A
Sbjct: 438 GLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEA 488
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/331 (18%), Positives = 136/331 (41%), Gaps = 51/331 (15%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L G G+ E++ F D++ G + D + +L+ F +FKE +
Sbjct: 392 YNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMK 451
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G + + + ++ L+ Y G+ ++++E+ + M A + +++ ++ +
Sbjct: 452 KSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWE 511
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYC------------------------------- 211
A K++ ++ + C P +++Y+S+++AY
Sbjct: 512 QAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLV 571
Query: 212 ----RIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCE 267
++ S+ EK F+E+ ++ + ++MV++YGK ++ +++ MK
Sbjct: 572 LVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSIN 631
Query: 268 PNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYNMAREFDMCVKF 311
+ YNSLM M+ R + + E Y T+I AY + +
Sbjct: 632 LSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRL 691
Query: 312 YNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++E + +G + D I V + S EE
Sbjct: 692 FSEMKSSGLIPDIVTYNIFVKSYVANSMFEE 722
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 52/203 (25%)
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY------------------ 210
+V+ FS+ + AV V+ ++++ G P VTY +++ Y
Sbjct: 182 TALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSMK 241
Query: 211 -----------------CRIG-LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIR 252
CR G LY +A KVF EM+ GF+ V ++S++ +YGK
Sbjct: 242 NDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHD 301
Query: 253 DAMRLVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQLEK-------------YTTVI 296
+A+ ++ +M+ GC P+V YNSL+ + G K +L++ YTT+I
Sbjct: 302 EAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLI 361
Query: 297 SAYNMAREFDMCVKFYNEFRMNG 319
S + A + D + Y+E NG
Sbjct: 362 SGLDRAGKIDAAIGTYDEMLRNG 384
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 125/284 (44%), Gaps = 7/284 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ ++SAG V D + ++ F + G +V+ +F E +K P Y L S
Sbjct: 412 FDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEM--KKSGYVPERD-TYVSLISS 468
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ G + ++ ++ M E GI D S Y +++ + A + AE+LF E E D
Sbjct: 469 YSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPD 528
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCI--SCVIVNGFSKRRAYWAAVKV 187
+ L+ Y ++K + E + ++ + + V+VN SK K
Sbjct: 529 ELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVN--SKVNNLSETEKA 586
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
+ +L + C ++++ Y + + K E++ M+ + Y+S++ MY +
Sbjct: 587 FLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSR 646
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
G ++ ++K G P+ + YN+++ +GR +++ +
Sbjct: 647 LGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASR 690
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 86/196 (43%), Gaps = 5/196 (2%)
Query: 34 KIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
K+ + + FLE R+ L ++ + GK+ ++ + MK I
Sbjct: 576 KVNNLSETEKAFLELGRRRCSL---DINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINL 632
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ Y SL+ ++ + + + E + E + G D + ++ Y +G +++ +
Sbjct: 633 STATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLF 692
Query: 154 ESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
MK++ L I D ++ + V + + A+ + ++++GC P + TY SI+ YCR
Sbjct: 693 SEMKSSGL-IPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCR 751
Query: 213 IGLYSKAEKVFIEMQQ 228
G + A+ + Q
Sbjct: 752 HGKIADAKSFLSNLPQ 767
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 17/139 (12%)
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG-RIRDAMR 256
P Y ++++A+ R + A VF M G +V Y+ ++ +Y K +D +
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK----------------YTTVISAYN 300
LV MK G + + YN+L+ R ++ K + +++ Y
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYG 295
Query: 301 MAREFDMCVKFYNEFRMNG 319
AR D + E + G
Sbjct: 296 KARMHDEAIGVLKEMELGG 314
>gi|255661166|gb|ACU25752.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 426
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 143/306 (46%), Gaps = 17/306 (5%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R+ L+P + Y L GK G L + + M++ + D +Y++LI + +
Sbjct: 1 RERALSPDR-YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 59
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
A +F + G DL + ++ ++ + + + ++ M+ A + +
Sbjct: 60 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYST 119
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ + + + + A+ V+ ++ C+ T +I+ Y ++G+ +A+K+F M++ G
Sbjct: 120 LLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 179
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------RAK 284
+ VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G +A
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239
Query: 285 NL------RQLEK----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
NL R +E Y+T+IS + + D + + R +G ID+ + M+ +
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 335 SKLSQI 340
++ +
Sbjct: 300 ERVGLV 305
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 151/333 (45%), Gaps = 30/333 (9%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK--LDLTPSSTHMYKILCDS 69
+M++AG+ ++ Y ++ + + + ++F E K LDLT + I+ D
Sbjct: 104 EMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCN-----IMIDV 158
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ G A E K F M++ GI + Y +L+ + A LF+ + K + ++
Sbjct: 159 YGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++++Y + EK +++ M+N + + I++ + K A +++
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L S G QV Y ++I AY R+GL + A+++ E+++ +A + + G
Sbjct: 279 KLRSSGVDIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRDIA----IHILAGAG 334
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
RI +A W++ +D G K++ E+ + S Y +++ V
Sbjct: 335 RIEEA---------------TWVFRQAIDA-GEVKDITVFERMIHLFSKY---KKYGNVV 375
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +++ R G D + +++ + KL + ++
Sbjct: 376 EVFDKMRGLGYFPDSXVIALVLNAYGKLHEFDK 408
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 9/225 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+H + M+ I + Y +M + K + EK L E ++R ++ P+S Y +
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE--PNSI-TYSTI 260
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK-G 125
GK G+ F+ ++ G+ D +Y ++I ++ + V A+ L E +
Sbjct: 261 ISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDN 320
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ RD+ + + G +E+ V +A + +++ FSK + Y V
Sbjct: 321 IPRDIAIHI-----LAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVV 375
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+V++++ G P A ++NAY ++ + KA V++EMQ+ G
Sbjct: 376 EVFDKMRGLGYFPDSXVIALVLNAYGKLHEFDKANDVYMEMQEVG 420
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
++M+ +GI + Y+++I + + ++ A LF++ G+ D ++ +++ Y
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-RRAYWAAVKVYEQLISQGCIPG 199
G+V ++ +K + NI I+ I+ G + A W V+ Q I G +
Sbjct: 300 ERVGLVAHAKRLLHELKRPD-NIPRDIAIHILAGAGRIEEATW----VFRQAIDAGEVKD 354
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMRL 257
+ +I+ + + Y +VF +M+ G+ D V+A ++ YGK A +
Sbjct: 355 ITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSXVIAL--VLNAYGKLHEFDKANDV 412
Query: 258 VAKMKPKGC 266
+M+ GC
Sbjct: 413 YMEMQEVGC 421
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 39/217 (17%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
M ++LC++ + E + M EKGI+ D +Y + + + +V LF +
Sbjct: 341 MLEVLCNA----EKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKM 396
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G++ D+ + ++ Y G+V+K E+ E M+
Sbjct: 397 KTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVME------------------------ 432
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ C P VTY S+IN + G +A +F EMQ+KG+D V YS +
Sbjct: 433 -----------ASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSIL 481
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +GK+ ++ A L +M +GC PN+ YN L+D
Sbjct: 482 IECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLD 518
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 3/199 (1%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
MY ++ +LGK + I F MK GI+ D Y +I S+ + V A ELF+
Sbjct: 372 MYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM 431
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E D+ + L+ + G +++ + + M+ + +++ F K
Sbjct: 432 EASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKV 491
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++++IS+GC P VTY +++ R G +A K++ M+Q+G + YS +
Sbjct: 492 EMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSIL 551
Query: 242 VAMYG---KTGRIRDAMRL 257
+ +T RIR R+
Sbjct: 552 ERLESRSQRTVRIRKPTRI 570
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
++KMK+ GI+ D Y ++ ++ ++G +K + LF +E S K D+ Y L
Sbjct: 393 FDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVV-----TYNSLI 447
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ LGK G E F++M+EKG D Y+ LI F +V++A LF E +G
Sbjct: 448 NCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCT 507
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
++ + L+ G E+ ++ E+MK L I D I+ I+ R
Sbjct: 508 PNIVTYNILLDCLERRGKTEEAHKLYETMKQQGL-IPDSITYSILERLESR 557
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
+V ++ V K +V E M+ + ++++ +K A +V+E + +
Sbjct: 134 IVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKH 193
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C+P TY +I + G SK F EM KG ++A+++++ GK + +
Sbjct: 194 CVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVI 253
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYN 313
+++KM C+PN + Y+ +D+ L +L + D+C +F N
Sbjct: 254 FVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEV------------LDICSRFMN 299
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 108/280 (38%), Gaps = 22/280 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D+L K+G + + F DMK+K + D Y LI F E
Sbjct: 166 YNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMV 225
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + +L F ++ + MV+K + V+ M + + + ++ +
Sbjct: 226 SKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLH 285
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ E L + Y+ ++ + C+ G S+A VF M A+ SM+
Sbjct: 286 ---RLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSML 342
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+ + +A+ L+ M KG +V +YN V SA
Sbjct: 343 EVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYN-------------------MVFSALGKL 383
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++ +++ + NG + D IM+ + ++ +++
Sbjct: 384 KQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDK 423
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M + G D Y ++ K GD + +L + E K++ + +Y + D+L
Sbjct: 209 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE---ADVVIYTTIIDAL 265
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
+ L F +M KGI + Y SLI + A L + E+ + ++
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +++EG + + ++ + M ++ ++NGF A ++E
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
+IS+ C P VTY ++I +C+ + ++F EM Q+G V Y++++ + G
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A ++ KM G P++ Y+ L+D
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLD 473
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 123/276 (44%), Gaps = 3/276 (1%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N L+ + +M + GI + Y ++ G + L + RK++ +
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN---PNVV 326
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+ L D+ K G+ E K + +M ++ I D Y+SLI F + A+ +F+
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
K ++ + L+ + + VE+ +E+ M L + ++ G +
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K++++++S G P +TY+ +++ C+ G KA VF +Q+ + + Y+ M
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ K G++ D L + KG +PNV IY +++
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 126/301 (41%), Gaps = 16/301 (5%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+T + L L +A E + M +G D Y +++ ++ +A L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
K+ E+ + D+ ++ ++ V L + M N + + ++
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
+ A ++ +I + P VT++++I+A+ + G +AEK++ EM ++ D +
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL-------RQLE 290
YSS++ + R+ +A + M K C PNV YN+L+ +AK + R++
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 291 K---------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ Y T+I A + DM K + + +G D I++ K ++E
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 342 E 342
+
Sbjct: 483 K 483
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 97/203 (47%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L K+ R E ++ FR+M ++G++ + Y +LI + +A+++FK+
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
G+ D+ + L+ + G +EK L V E ++ +++ +++ G K
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ L +G P + Y ++I+ +CR GL +A+ +F EM++ G Y++++
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 243 AMYGKTGRIRDAMRLVAKMKPKG 265
+ G + L+ +M+ G
Sbjct: 578 RARLRDGDKAASAELIKEMRSCG 600
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 4/229 (1%)
Query: 49 ESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI 108
+SR L PS K+L ++ K + ++ M+ I D Y LI F
Sbjct: 73 QSRPL---PSIVEFNKLL-SAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRR 128
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
+++ +A + + + G D+ L+ Y + + + +V+ M E +
Sbjct: 129 SQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTF 188
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++G AV + ++++++GC P TY +++N C+ G A + +M++
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ VV Y++++ + DA+ L +M KG PNV YNSL+
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A +LF E + L + F KL+ + + + + E M+N ++ +++N
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
F +R A+ V +++ G P VT +S++N YC S+A + +M +
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM-------DMHGRAKNL 286
V +++++ + +A+ L+ +M +GC+P+++ Y +++ D+ L
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 287 RQLEK---------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
+++EK YTT+I A + + + + E G
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++KM S G+ D Y +++ K G EK +F + K++ + Y I+ +
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME---PDIYTYNIMIEG 509
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
+ K+G+ + F + KG+ + +Y ++I F + A+ LF+E +E G L +
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+ L+ + +G + E+++ M++
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRS 598
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 9/287 (3%)
Query: 11 EKMKSAGIVLDSGC------YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
E + G ++ SGC Y ++ G+ K L + R L P+ Y
Sbjct: 295 EAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKR--GLLPNKVS-YT 351
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L + K G L M E+G D YA+LI EV VA + + EK
Sbjct: 352 PLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEK 411
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G+L D ++ L+ ++G + ++ M + + I+ +V+GF + + A
Sbjct: 412 GVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEA 471
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
K++E I +G PG V Y ++I YC+ G+ A F M Q YS+++
Sbjct: 472 KKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDG 531
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
Y K + A+R+ M C+PNV Y L++ + ++ + EK
Sbjct: 532 YIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEK 578
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 164/381 (43%), Gaps = 60/381 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++++K G + Y I+ F K G E V L +E R LD+ S H+Y + D+
Sbjct: 230 FKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDV---SIHIYNNIIDA 286
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K G E M + G D + Y LI S EV AE+L ++A ++G+L +
Sbjct: 287 QFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPN 346
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKN--------------------AELNISDC--- 166
+ L+ Y ++G + L+++ M E++++
Sbjct: 347 KVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRN 406
Query: 167 ------------ISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIG 214
I V+++G K+ AA + +++ Q P A++++ + R G
Sbjct: 407 KMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHG 466
Query: 215 LYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYN 274
+ +A+K+F +KG D VV Y++M+ Y K G ++DA+ +M P+ + Y+
Sbjct: 467 DFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYS 526
Query: 275 SLM-------DMHGRAKNLRQLEK---------YTTVISAYNMAREFDMCVKFYNE---F 315
+++ D+HG + + K YT +I+ + ++ + + K + +
Sbjct: 527 TIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSL 586
Query: 316 RMNGGVIDRAMAGIMVGVFSK 336
R+ V+ I++G F K
Sbjct: 587 RLKPNVVTYT---ILIGCFCK 604
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L D K G F+++K KG L Y ++I F + +V ++L E
Sbjct: 210 YNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMS 269
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E+G+ + ++ ++ + G + + V M + + +++ G
Sbjct: 270 ERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVH 329
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ EQ I +G +P +V+Y +I+ YC+ G Y +A + I+M ++G +V Y++++
Sbjct: 330 KAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALI 389
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
G + A+ + KM KG P+ IYN LM
Sbjct: 390 HGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLM 424
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
++Y +L L K GR +M ++ + D + A+L+ F + + A++L
Sbjct: 415 PDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKL 474
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
F+ EKG+ + + ++ Y + GM++ L + M + + I++G+ K
Sbjct: 475 FELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIK 534
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A++++ ++ C P VTY +IN +C G ++AEK F +M VV
Sbjct: 535 MNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVT 594
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y+ ++ + K + A +M + C PN YN LM+
Sbjct: 595 YTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMN 635
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 99/202 (49%), Gaps = 1/202 (0%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE-AEEKGMLRDLEVFLKL 136
E+ + MK K ++ ++ +I FA V A E ++ + + D+ L
Sbjct: 84 EVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSL 143
Query: 137 VLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGC 196
+ + ++ G VE +V + M + + + C++V G K K+ E+ +GC
Sbjct: 144 LNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGC 203
Query: 197 IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMR 256
+P V Y ++I+ YC+ G +A +F E++ KGF V Y +++ + K G+ +
Sbjct: 204 MPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDK 263
Query: 257 LVAKMKPKGCEPNVWIYNSLMD 278
L+ +M +G + ++ IYN+++D
Sbjct: 264 LLVEMSERGLDVSIHIYNNIID 285
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 2/217 (0%)
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
I+ L K G+ + K +G + + Y +LI + + + A LFKE + K
Sbjct: 177 IMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMK 236
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
G L ++ + ++ + ++G E +++ M L++S I I++ K A
Sbjct: 237 GFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEA 296
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+I GC P TY +I C G KAE++ + ++G V+Y+ ++
Sbjct: 297 ADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHN 356
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
Y K G A+ L+ KM +G +P++ Y +L +HG
Sbjct: 357 YCKQGEYLRALDLLIKMSERGHKPDLVTYAAL--IHG 391
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 126/317 (39%), Gaps = 28/317 (8%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M + D+ +++ F + GD E+ LF + +D P Y +
Sbjct: 442 EMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGID--PGVVG-YNAMIKGYC 498
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G + L F+ M + D Y+++I + + ++ A +F + ++
Sbjct: 499 KFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVV 558
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + G + + + + M + L + +++ F K A +EQ+
Sbjct: 559 TYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQM 618
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKV-----------------FIEMQQKGFDKC 234
+ + C+P VTY ++N GL + + V F M G+D+
Sbjct: 619 LMEKCLPNDVTYNYLMN-----GLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRR 673
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTT 294
+Y+S++ + ++ A+ L KM KG P+ +L +HG R + +
Sbjct: 674 AASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVAL--LHGLCLEGRS-QDWNN 730
Query: 295 VISAYNMAREFDMCVKF 311
VIS RE + VK+
Sbjct: 731 VISCKLNERELQVAVKY 747
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 20/159 (12%)
Query: 184 AVKVYEQLIS-QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++ Y I C+P + S++N + G A KV+ EM + + MV
Sbjct: 120 ALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMV 179
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
K G++ D +L+ K +GC PN+ YN+L+D Y
Sbjct: 180 KGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLID-------------------GYCKK 220
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIE 341
+ + + E +M G + G ++ F K + E
Sbjct: 221 GDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFE 259
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 29/329 (8%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC---- 67
+M G D Y I++ K G LE + L+ PS ++C
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGH--------LEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 68 -DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L + R E + +M +K D + L+ F V EL ++ G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ + ++ + +EG++++ + +++SM + + +++ G + A +
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ Q+I QGC P VT+ ++IN C+ GL +A ++ +M G +++YS+++ G
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRAKNLRQLEK------------ 291
K G+ +A+ L+ M KG PN IY+S+ + GR + Q+
Sbjct: 508 KAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAV 567
Query: 292 -YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y VIS+ E D + F+ NG
Sbjct: 568 LYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 121/273 (44%), Gaps = 7/273 (2%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + + + L GR + L+ +M KG P +Y ++ + + +
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYI-EEGMVEKTLEVVESMK--NAELNISDCISCVIVN 173
+ + KG D LVL I E+G V++ + ++ + E +I + ++
Sbjct: 168 VLEAMHAKGCTLDTG-NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA--VLK 224
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G + + ++ ++++ C P VT+ ++I CR GL+ + +V +M + G
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYT 293
+ Y++++ K G + A ++ +M G +PNV YN+++ A+ ++ E+
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
+ + + + D+ +F G++DR +
Sbjct: 345 SEMFQKDCPLD-DVTFNILVDFFCQNGLVDRVI 376
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/279 (18%), Positives = 116/279 (41%), Gaps = 13/279 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAAL-----FLECESRKLDLTPS 58
++ + E M + G LD+G ++ A + G ++ L F CE+ +
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVS---- 218
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
Y + L + R ++ + +M + + +LI + E+
Sbjct: 219 ----YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ E G D+ ++ ++ +EG +E E++ M + L + ++ G
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A ++ ++ + C VT+ +++ +C+ GL + ++ +M G V+ Y
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++++ + K G I +A+ L+ M GC+PN Y ++
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 77/174 (44%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + L + L K G + ++ + M G D Y+++I + + A E
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L KG+ + ++ + EG V K +++ +++K+ + + +++
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
KR A+ + ++S GC+P + TY +I GL +A+++ E+ +G
Sbjct: 578 KRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 5/231 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + K G E + + M G + Y ++ S AEEL +
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
++G + F L+ ++G+VE+ +E+++ M + D IS +++G K
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS-PDLISYSTVIDGLGKAGKT 512
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++ ++++G P + Y+SI A R G +K ++F ++ V Y+++
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRAKNLRQL 289
++ K A+ A M GC PN Y L + G AK ++L
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%)
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
EEL E ++ F L+ G+ E+ EV+ M + I++G
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K A ++ ++ S G P V Y +++ C + +AE++ EM QK
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V ++ +V + + G + + L+ +M GC P+V Y ++++
Sbjct: 356 DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 3/126 (2%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
++ L M + GI ++ Y I A + G KV +F ++ K S +
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMF---DNIKDTTIRSDAVL 568
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + SL K + FF M G + + S Y LI AS K A+EL E
Sbjct: 569 YNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELC 628
Query: 123 EKGMLR 128
+G LR
Sbjct: 629 SRGALR 634
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 96/195 (49%)
Query: 83 FRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIE 142
DM +KG D ++ LI S+ V+ + ++F + +E G+ R ++ + L + +
Sbjct: 172 LEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIVR 231
Query: 143 EGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVT 202
+G M + + + V++ GF AV+ YE + +G P VT
Sbjct: 232 KGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVT 291
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y ++IN Y R +AEK+F EM+ K V++Y++M+ Y RI D +RL+ +MK
Sbjct: 292 YNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRINDGLRLLEEMK 351
Query: 263 PKGCEPNVWIYNSLM 277
G +PN Y +L+
Sbjct: 352 SVGIKPNNVTYTTLL 366
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Query: 114 AEELFKEAEEKGMLR-DLEVFLKLVLMYIEEGMVEKTLEVV-ESMKNAELNISDCISCVI 171
A + F+ E G+++ D E +K++ + M+ +V E M + + + ++
Sbjct: 131 ALQFFRWVERAGLIQHDRETHMKIIQILGRYSMLNHARCIVLEDMPKKGFELDEDMFVLL 190
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ + K +VK++ ++ G +Y ++ R G Y A++ F +M +G
Sbjct: 191 IDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIVRKGRYMMAKRFFNKMLDEGI 250
Query: 232 DKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK 291
Y+ ++ + + R+R A+R MK +G P+V YN++++ + R K + + EK
Sbjct: 251 GPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEK 310
Query: 292 YTTVISAYNMA 302
+ A ++A
Sbjct: 311 LFAEMKAKDIA 321
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 90/199 (45%), Gaps = 5/199 (2%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y++L +S + G + M E G L D SV+ S++ S V+ A
Sbjct: 539 PRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGRVQTASR 598
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNIS-DCISCVIVNGF 175
+ K EKG+ ++++ K++ + G E+ L ++ + +++ N++ D + ++
Sbjct: 599 VMKSMVEKGVKENMDLVAKILEALLMRGHEEEALGRIDLLMSSQCNVNFDSLLSIL---- 654
Query: 176 SKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCV 235
S++ AA+K+ + + + C +Y +++A G A + ++ +KG
Sbjct: 655 SEKGKTIAALKLLDFGLQRDCDIDFKSYDKVLDALLAAGKTLNAYSILCKIMEKGGVTSW 714
Query: 236 VAYSSMVAMYGKTGRIRDA 254
+Y ++ + G + A
Sbjct: 715 RSYEDLIKSLNQEGNTKQA 733
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 115/289 (39%), Gaps = 15/289 (5%)
Query: 20 LDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL--GKSGRAF 77
++SG Y +++ G + K LF + + ++ ++C G AF
Sbjct: 471 MESGAYNPVIQYLCSHGQTGKAEILFRQLLKKGVE---DPLAFNNLICGHAKEGTPDSAF 527
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
EILK M KGI D Y LI S+ E A+ E G L D VF ++
Sbjct: 528 EILKI---MGRKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSVM 584
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCV--IVNGFSKRRAYWAAVKVYEQLISQG 195
E+G V+ V++SM E + + + V I+ R A+ + L+S
Sbjct: 585 ESLYEDGRVQTASRVMKSM--VEKGVKENMDLVAKILEALLMRGHEEEALGRIDLLMSSQ 642
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C V + S+++ G A K+ Q+ D +Y ++ G+ +A
Sbjct: 643 C---NVNFDSLLSILSEKGKTIAALKLLDFGLQRDCDIDFKSYDKVLDALLAAGKTLNAY 699
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE 304
++ K+ KG + Y L+ + N +Q + + +I + + E
Sbjct: 700 SILCKIMEKGGVTSWRSYEDLIKSLNQEGNTKQADILSRMIKGDDKSHE 748
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 102/260 (39%), Gaps = 6/260 (2%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSST-HM 62
Q + + KMK G+ Y + + + G F ++ LD T H
Sbjct: 201 QESVKMFSKMKELGVERSVKSYNALFKVIVRKGRYMMAKRFF----NKMLDEGIGPTRHT 256
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L S R ++F+ DMK +GI D Y ++I + ++ AE+LF E +
Sbjct: 257 YNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMK 316
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
K + + + ++ Y + L ++E MK+ + ++ ++
Sbjct: 317 AKDIAPTVISYTTMIKGYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMT 376
Query: 183 AAVKVYEQLISQGCIPGQVT-YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A + ++++ + P + + ++N+ C+ G A V M + Y +
Sbjct: 377 EAKDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSIPSEAGHYGVL 436
Query: 242 VAMYGKTGRIRDAMRLVAKM 261
+ + K A++ V K+
Sbjct: 437 IENFCKAEEYDQAVKFVDKL 456
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
V E + +G + + +I++Y + G+ ++ K+F +M++ G ++ V +Y+++ +
Sbjct: 171 VLEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIV 230
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFD 306
+ GR A R KM +G P YN L I + ++
Sbjct: 231 RKGRYMMAKRFFNKMLDEGIGPTRHTYNVL-------------------IWGFFLSMRLR 271
Query: 307 MCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
V+FY + ++ G D M+ + + ++EE
Sbjct: 272 TAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEE 307
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Query: 37 DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
+S+ F E L TH+ KI+ + LG++ + DM +KG+ D
Sbjct: 131 NSDHALQFFRWVERAGLFRHDRDTHL-KII-EILGRASKLNHARCILLDMPKKGVEWDED 188
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
++ LI S+ V+ + ++F++ +E G+ R ++ + L + + G +M
Sbjct: 189 LFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAM 248
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
N + + +++ GF A + +E++ + P VTY ++IN Y RI
Sbjct: 249 LNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKM 308
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+AEK F+EM+ + + V++Y++M+ Y GR+ D +RL +MK G +PN Y++L
Sbjct: 309 EEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTL 368
Query: 277 M 277
+
Sbjct: 369 L 369
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 125/304 (41%), Gaps = 42/304 (13%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAF---YKIGDSEKVA-------------ALFL---- 46
L +E+MKS GI ++ Y ++ K+ +++ V ++F+
Sbjct: 347 LRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLIT 406
Query: 47 -ECESRKLDLT------------PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
+C++ +LD P+ Y +L ++ KSG +K + EK I+
Sbjct: 407 CQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIIL 466
Query: 94 DP--------SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
P S Y +I + + AE LF++ +KG ++D F L+ + +EG
Sbjct: 467 RPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKG-VQDPIAFNNLIRGHSKEGA 525
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
E E+++ M E+ +++ F K+ A + +I G IP + S
Sbjct: 526 PESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRS 585
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
++ + G A +V M +KG + + + ++ G + +A+ + + G
Sbjct: 586 VMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNG 645
Query: 266 CEPN 269
CEP+
Sbjct: 646 CEPD 649
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 114/282 (40%), Gaps = 54/282 (19%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGIL-EDPSVYASLICSFASIAEVKV 113
L P H ++ + L S + L+FFR ++ G+ D + +I +++
Sbjct: 113 LVPQFDH--SLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNH 170
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A + + +KG+ D ++F+ L+ Y + G+V+++++V + MK EL + I
Sbjct: 171 ARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMK--ELGVERTIK----- 223
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+Y ++ R G Y A++ F M +G
Sbjct: 224 ----------------------------SYDALFKVILRRGRYMMAKRYFNAMLNEGVMP 255
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-- 291
Y+ M+ + + ++ A R +MK + P+V YN++++ + R K + + EK
Sbjct: 256 TCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFF 315
Query: 292 --------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
YTT+I Y D ++ + E + G
Sbjct: 316 VEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFG 357
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y++L +S K G + M E G + D S++ S++ S ++ A
Sbjct: 542 PREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASR 601
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDCISCVIVNG 174
+ EKG+ ++++ K++ + G VE+ L ++ + N E + +S + G
Sbjct: 602 VMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPDFDGLLSVLCAKG 661
Query: 175 ----------FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY---CRI 213
F R Y + YE ++ +T +NAY C+I
Sbjct: 662 KTIAALKLLDFGLERDYNISFSSYENVLD-----ALLTAGKTLNAYSILCKI 708
>gi|341605745|gb|AEK82975.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 7/180 (3%)
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNG 174
L++E +EKG+ VF ++ +EG + + V E+M K ++ N++ I V+++G
Sbjct: 4 LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVA--IYTVLIDG 61
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
++K + A+++ ++I +G P VTY+ ++N C+ G +A F + GF
Sbjct: 62 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGFAIN 121
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKNLRQLEK 291
+ YSS++ GK GRI +A RL +M KGC + + YN+L+D HG+ L K
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 80 LKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLM 139
+ +++M EKGI P V++ +I ++ +F+ KG ++ ++ L+
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61
Query: 140 YIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
Y + G VE + ++ M + V+VNG K A+ ++ G
Sbjct: 62 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGFAIN 121
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
+ Y+S+I+ + G +AE++F EM +KG + Y++++ K G++ +AM L
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181
Query: 260 KM-KPKGCEPNVWIYNSLM 277
+M + +GC+ V+ Y L+
Sbjct: 182 RMEEEEGCDQTVYTYTILI 200
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 43 ALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLI 102
AL+ E + + + + P H++ ++ L K G+ E F +M KG + ++Y LI
Sbjct: 3 ALYQEMDEKGIQVPP---HVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 59
Query: 103 CSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELN 162
+A V+ A L ++G D+ + +V + G VE+ L+ ++ +
Sbjct: 60 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGFA 119
Query: 163 ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKV 222
I+ +++G K A +++E++ +GC Y ++I+A + G +A +
Sbjct: 120 INSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTL 179
Query: 223 FIEM-QQKGFDKCVVAYSSMVA 243
F M +++G D+ V Y+ +++
Sbjct: 180 FKRMEEEEGCDQTVYTYTILIS 201
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 1/174 (0%)
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ M + + + +++ G K V+E +I +G P Y +I+ Y +
Sbjct: 6 QEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKS 65
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G A ++ M +GF VV YS +V K GR+ +A+ + G N Y
Sbjct: 66 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGFAINSMFY 125
Query: 274 NSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMA 327
+SL+D G+A + + E+ +S R+ C + G +D AM
Sbjct: 126 SSLIDGLGKAGRIDEAERLFEEMSEKGCTRD-SYCYNALIDALTKHGKVDEAMT 178
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 22/177 (12%)
Query: 185 VKVYEQLISQGC-IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
V +Y+++ +G +P V ++ +I C+ G ++ VF M +KG V Y+ ++
Sbjct: 2 VALYQEMDEKGIQVPPHV-FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 60
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
Y K+G + DA+RL+ +M +G +P+V Y+ +++ G KN R E
Sbjct: 61 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN--GLCKNGRVEEALDYFQTCRXNGF 118
Query: 292 ------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+++I A D + + E G D ++ +K +++E
Sbjct: 119 AINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDE 175
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 132/310 (42%), Gaps = 41/310 (13%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
+ + ++++MK++G+ D Y ++ A G + ALF + +P Y
Sbjct: 158 EQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALF-----SAMTCSPD-IMTY 211
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+L D K G+ +E +++ + G + Y+ +I + + +V+ A E+F + E
Sbjct: 212 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA-YW 182
+ + F L+ + + GM+E +++ M+ + +++ K+R +
Sbjct: 272 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVY 331
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK------------- 229
AV ++ +L G P VTY S+I +C S+A + F EM+ K
Sbjct: 332 TAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILID 391
Query: 230 ---------------------GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
G+ VV Y ++ + K G ++ A+ KMK GC P
Sbjct: 392 GLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAP 451
Query: 269 NVWIYNSLMD 278
N I+N+L+D
Sbjct: 452 NTVIFNTLID 461
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 133/274 (48%), Gaps = 12/274 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ MKS+G++ ++ ++ +IG LF E ++ L S++H IL
Sbjct: 55 FSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPF-LPTSASH--NILLRG 111
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFA----SIAEVKVAEELFKEAEEKG 125
+GR + L +DM++ Y ++ S ++ A E FKE + G
Sbjct: 112 FFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASG 171
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAA 184
+ DLE + L+ + G + + + +M + D ++ V+++G+ K + A
Sbjct: 172 VEPDLESYHILLSALSDSGRMAEAHALFSAMTCS----PDIMTYNVLMDGYCKIGQTYEA 227
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++++ G P TY+ IIN YC++ +A +VF++M + V +++++A
Sbjct: 228 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAG 287
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ K G + DA++L A+M+ GC+ + YN+L+D
Sbjct: 288 FCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLID 321
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 2/216 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASI-AEVKVAEELFKEA 121
+ L K+G + +K F +M++ G Y +LI S V A +LF +
Sbjct: 281 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 340
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E G+ + + L+ + + + + ++ + M+ + + ++++G K R
Sbjct: 341 EGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEME-GKCAPNVITYSILIDGLCKVRRM 399
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A K E + + G P VTY +IN +C+ G A F +M+ G V ++++
Sbjct: 400 KEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTL 459
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ K R D +RL+ M +GC+P+V YN L+
Sbjct: 460 IDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLI 495
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 36/259 (13%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L + H Y +L K G+ + + F DMK G+L + S +L+ I ++ A
Sbjct: 27 LFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSA 86
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
+LF+E + L L+ + G V L ++ M+ + +++ +++ G
Sbjct: 87 LKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKG 146
Query: 175 FS-------------------KRRAYWAAVKVYEQLIS-----------------QGCIP 198
K ++ Y L+S C P
Sbjct: 147 LCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSP 206
Query: 199 GQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV 258
+TY +++ YC+IG +A+ + E+ + G++ V YS ++ Y K ++ +A +
Sbjct: 207 DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVF 266
Query: 259 AKMKPKGCEPNVWIYNSLM 277
KM C PN +N+L+
Sbjct: 267 MKMIESNCVPNAVTFNTLI 285
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 16/248 (6%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL +L SGR E F M D Y L+ + I + A+ L KE
Sbjct: 179 YHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEIL 235
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ G ++ + ++ Y + VE+ EV M + + ++ GF K
Sbjct: 236 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLE 295
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYC--RIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A+K++ ++ GC VTY ++I++ C R G+Y+ A +F +++ G +V Y+S
Sbjct: 296 DAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT-AVDLFNKLEGAGLTPTIVTYNS 354
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD-------MHGRAKNLRQLEK-- 291
++ + R+ +AM+ +M+ K C PNV Y+ L+D M AK L ++
Sbjct: 355 LIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHG 413
Query: 292 YTTVISAY 299
YT + Y
Sbjct: 414 YTPTVVTY 421
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 113/269 (42%), Gaps = 8/269 (2%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
+ KM + V ++ + ++ F K G E LF E E T + Y L DS
Sbjct: 266 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVT---YNTLIDS 322
Query: 70 L-GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K G + + F ++ G+ Y SLI F + A + F E E K
Sbjct: 323 LCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAP 381
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
++ + L+ + +++ + +E MK + ++NGF K +A+ +
Sbjct: 382 NVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFF 441
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
E++ GC P V + ++I+ C+ + ++ M +G V+ Y+ +++
Sbjct: 442 EKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSA 501
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
R+ DA RL M C PNV +N L+
Sbjct: 502 NRVEDAQRLFDGM---ACAPNVTTFNFLI 527
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 119/268 (44%), Gaps = 3/268 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++M G + Y +++ K G + L + E RK+ L Y I+ D L
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK---YSIIIDGL 257
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G F +M+ KG D +Y +LI F +L ++ ++ + D+
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
F L+ +++EG + + E+ + M ++ +++GF K A + +
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGR 250
++S+GC P T+ +IN YC+ L ++F +M +G V Y++++ + + G+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 251 IRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ A L +M + P++ Y L+D
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLD 465
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 130/282 (46%), Gaps = 15/282 (5%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPS-----STHMYK 64
+++M GI D+ Y +++ F K +K + LDL S + +
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM--------LDLMVSKGCGPNIRTFN 391
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
IL + K+ + L+ FR M +G++ D Y +LI F + +++VA+ELF+E +
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ D+ + L+ + G EK LE+ E ++ +++ + I +I++G A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++ L +G P TY +I C+ G S+A+ +F +M++ G Y+ ++
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM--HGRAK 284
+ G + +L+ ++K G + ++DM GR K
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLK 613
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 129/322 (40%), Gaps = 28/322 (8%)
Query: 48 CESRKLDLTPSS------------THMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDP 95
C RKL L S+ T + L + L GR E L+ M E G
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 96 SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVES 155
+L+ +V A L E G + + ++ + + G +E++
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 156 MKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGL 215
M+ ++ + +I++G K + A ++ ++ +G + Y ++I +C G
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 216 YSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNS 275
+ K+ +M ++ VVA+S+++ + K G++R+A L +M +G P+ Y S
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 276 LMDMHGRAKNLRQ----------------LEKYTTVISAYNMAREFDMCVKFYNEFRMNG 319
L+D + L + + + +I+ Y A D ++ + + + G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 320 GVIDRAMAGIMVGVFSKLSQIE 341
V D ++ F +L ++E
Sbjct: 418 VVADTVTYNTLIQGFCELGKLE 439
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 38/225 (16%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L + KM G+V D+ Y +++ F ++G E LF E SR++ S YKIL
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS---YKIL 463
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L +G + L+ F +++ + D +Y +I + ++V A +LF KG+
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D++ + +++ G K+ + A
Sbjct: 524 KPDVKTY-----------------------------------NIMIGGLCKKGSLSEADL 548
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGF 231
++ ++ G P TY +I A+ G +K+ K+ E+++ GF
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+++N + R A ++I G P VT++++IN C G S+A ++ M +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN---- 285
G ++ +++V G++ DA+ L+ +M G +PN Y ++ + ++
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 286 ---LRQLE---------KYTTVISAYNMAREFDMCVKFYNEFRMNG 319
LR++E KY+ +I D +NE + G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D Y++LI F + + A L E E++G++ V+ ++ + G V+ L
Sbjct: 32 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 91
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
M+ S ++V+ K A + E +I GC P VTY ++IN +C++
Sbjct: 92 RDMQR-HCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 150
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G +A +F +M + V Y+ ++ Y K R +D +L+ +M GCEPN Y
Sbjct: 151 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 210
Query: 274 NSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
N+LMD L K I A+N+A+
Sbjct: 211 NTLMD---------SLVKSGKYIDAFNLAQ 231
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 11/245 (4%)
Query: 25 YCQIMEAFYKIG---DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILK 81
Y +M++ K G D+ +A + L + D PS + ++ D K G+ +
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMML-----RRDCKPSH-FTFNLMIDMFCKVGQLDLAYE 263
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
F+ M ++G L D Y +I + A +L + E G D+ + +V
Sbjct: 264 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 323
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ 200
+ V++ EV E ++N + D ++C +++G K R A K+ ++ G P
Sbjct: 324 KASQVDEAYEVYEVLRNGGYFL-DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 382
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
V Y +I+ +C+ K+ F EM KG V+ YS ++ K+ R+RD L+
Sbjct: 383 VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT 442
Query: 261 MKPKG 265
M +G
Sbjct: 443 MLERG 447
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 114/263 (43%), Gaps = 5/263 (1%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
C C ++ AF + +++ LF ++ L + Y L + K+ + +
Sbjct: 1 CNC-LLSAFVRKKKAQEAYDLF---KNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLL 56
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+M+++GI+ +VY ++I V A +++ + + + + LV +
Sbjct: 57 DEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKS 115
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
+ ++E M A + ++NGF K AV ++ Q++ C P TY
Sbjct: 116 ARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTY 175
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+I+ YC+ K+ EM + G + + Y++++ K+G+ DA L M
Sbjct: 176 NILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLR 235
Query: 264 KGCEPNVWIYNSLMDMHGRAKNL 286
+ C+P+ + +N ++DM + L
Sbjct: 236 RDCKPSHFTFNLMIDMFCKVGQL 258
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 153/390 (39%), Gaps = 55/390 (14%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q ++M+ GIV + Y I++ + D+ +V + + + PS Y
Sbjct: 50 QQAYRLLDEMEKRGIVPHNAVYNTIIKG---LCDNGRVDSALVHYRDMQRHCAPSVI-TY 105
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
IL D+L KS R + DM E G + Y +LI F + + A LF + E
Sbjct: 106 TILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLE 165
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNI------------------ 163
D+ + L+ Y ++ + ++++ M E N
Sbjct: 166 NSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYID 225
Query: 164 ----------SDCISC-----VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIIN 208
DC ++++ F K A ++++ + +GC+P TY +I+
Sbjct: 226 AFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMIS 285
Query: 209 AYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEP 268
CR A ++ M + G VV Y+S+V+ K ++ +A + ++ G
Sbjct: 286 GACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFL 345
Query: 269 NVWIYNSLMD-------MHGRAKNLRQLEK---------YTTVISAYNMAREFDMCVKFY 312
+V ++L+D + K LR++E+ YT +I + A + D + F+
Sbjct: 346 DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFF 405
Query: 313 NEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+E G V I++ K +++ +
Sbjct: 406 SEMLDKGCVPTVITYSIVIDKLCKSARVRD 435
>gi|255661162|gb|ACU25750.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 426
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 141/302 (46%), Gaps = 17/302 (5%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R+ L+P + Y L GK G L + + M++ + D +Y++LI + +
Sbjct: 1 RERALSPDR-YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 59
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
A +F + G DL + ++ ++ + + + ++ M+ A + +
Sbjct: 60 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYST 119
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ + + + + A+ V+ ++ C+ T +I+ Y ++G+ +A+K+F M++ G
Sbjct: 120 LLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 179
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------RAK 284
+ VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G +A
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239
Query: 285 NL------RQLEK----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
NL R +E Y+T+IS + + D + + R +G ID+ + M+ +
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 335 SK 336
+
Sbjct: 300 ER 301
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L + +KM+ + D Y ++E K+ D K ++F ++ TP Y
Sbjct: 27 AALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF--SRLKRSGFTPDLV-AYN 83
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ + GK+ E +M+ G+ + + Y++L+ + + A +F E E
Sbjct: 84 AMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREI 143
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
L DL ++ +Y + GM ++ ++ M+ + + ++ + + A
Sbjct: 144 KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEA 203
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ + + VTY S++ Y + + KA + EMQ +G + + YS+++++
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISI 263
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+GK G++ A L K++ G + + +Y +++ + RA
Sbjct: 264 WGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERA 302
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 149/333 (44%), Gaps = 30/333 (9%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK--LDLTPSSTHMYKILCDS 69
+M++AG+ ++ Y ++ + + + ++F E K LDLT + I+ D
Sbjct: 104 EMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCN-----IMIDV 158
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ G A E K F M++ GI + Y +L+ + A LF+ + K + ++
Sbjct: 159 YGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++++Y + EK +++ M+N + + I++ + K A +++
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L S G QV Y ++I AY R GL + A+++ E+++ +A + + G
Sbjct: 279 KLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIA----IHILAGAG 334
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
R +A W++ +D G K++ E+ + S Y +++ V
Sbjct: 335 RXEEA---------------TWVFRQAIDA-GEVKDITVFERMIHLFSKY---KKYGNVV 375
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +++ R G D + +++ + KL + ++
Sbjct: 376 EVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDK 408
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 9/225 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+H + M+ I + Y +M + K + EK L E ++R ++ P+S Y +
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE--PNSI-TYSTI 260
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK-G 125
GK G+ F+ ++ G+ D +Y ++I ++ V A+ L E +
Sbjct: 261 ISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ RD+ + + G E+ V +A + +++ FSK + Y V
Sbjct: 321 IPRDIAIHI-----LAGAGRXEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVV 375
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+V++++ G P A ++NAY ++ + KA V++EMQ+ G
Sbjct: 376 EVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
++M+ +GI + Y+++I + + ++ A LF++ G+ D ++ +++ Y
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-RRAYWAAVKVYEQLISQGCIPG 199
G+V ++ +K + NI I+ I+ G + A W V+ Q I G +
Sbjct: 300 ERAGLVAHAKRLLHELKRPD-NIPRDIAIHILAGAGRXEEATW----VFRQAIDAGEVKD 354
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMRL 257
+ +I+ + + Y +VF +M+ G+ D V+A ++ YGK A +
Sbjct: 355 ITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIAL--VLNAYGKLHEFDKANDV 412
Query: 258 VAKMKPKGC 266
+M+ GC
Sbjct: 413 YMEMQEVGC 421
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 35/266 (13%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+ Y +L +L SGR E L F +MKEKG + Y LI ++ A ++
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E EKG++ + + L+ Y +EGM++ E+++ M++ + ++ G K
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCK 416
Query: 178 RRAYWAAVKV---------------YEQLIS--------------------QGCIPGQVT 202
+R A+ + Y LI G +P Q T
Sbjct: 417 KRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWT 476
Query: 203 YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMK 262
Y+ I+ C+ G +A +F ++ KG V Y++++ Y K G+I A L+ +M
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536
Query: 263 PKGCEPNVWIYNSLMDMHGRAKNLRQ 288
C PN + YN L++ + K +++
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKE 562
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 130/290 (44%), Gaps = 10/290 (3%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + D+L K GR E F +K KG+ + +Y +LI + + ++ VA L +
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
L + + L+ +E +++ +V M + + +++ K A+
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+KV+ ++S G P TY + ++AY G+ + + V +M ++G +V Y+ ++
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNM- 301
Y + G A + M GC+P+++I + L+ +++ + S N+
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVN 716
Query: 302 ---------AREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
E+++ +K + + +G ID ++ G ++ F + ++EE
Sbjct: 717 SVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEE 766
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 137/335 (40%), Gaps = 19/335 (5%)
Query: 24 CYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFF 83
CY I+ + K +++ ++LE + ++ + + + + + K G E +
Sbjct: 161 CYNTILMSLSKFLLIDEMKTVYLELLNNQIS---PNIYTFNAMVNGYCKIGNVVEAELYA 217
Query: 84 RDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEE 143
+ + G+ D Y SLI V A E+F +KG R+ + L+ E
Sbjct: 218 SKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEA 277
Query: 144 GMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTY 203
G + + L++ M + V++ S A+ ++ ++ +GC P TY
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTY 337
Query: 204 ASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKP 263
+I+ C+ +A K+ EM +KG VV Y++++ Y K G I DA ++ M+
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397
Query: 264 KGCEPNVWIYNSLM-------DMHGRAKNL-RQLEK--------YTTVISAYNMAREFDM 307
C PN YN L+ +H L + LE+ Y ++I + +
Sbjct: 398 NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457
Query: 308 CVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ + NG V D+ + + K ++EE
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 121/305 (39%), Gaps = 38/305 (12%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
Y K+ AG+ D+ Y ++ + + +FL + S Y L
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS---YTNLIH 272
Query: 69 SLGKSGRAFEILKFFRD-----------------------------------MKEKGILE 93
L ++GR E LK F D MKEKG
Sbjct: 273 GLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEP 332
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
+ Y LI ++ A ++ E EKG++ + + L+ Y +EGM++ E++
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL 392
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
+ M++ + ++ G K+R A+ + +++ + P +TY S+I+ C++
Sbjct: 393 DLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKV 452
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
A ++ M + G YS + K GR+ +A L +K KG + N IY
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIY 512
Query: 274 NSLMD 278
+L+D
Sbjct: 513 TALID 517
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 94/220 (42%)
Query: 58 SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEEL 117
+T Y L L K + + + M E+ + Y SLI + +++ A L
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461
Query: 118 FKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK 177
E G++ D + + +EG VE+ + +S+K + ++ I +++G+ K
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCK 521
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A + E++++ C+P TY +I C+ +A + +M G VV
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
Y+ ++ K G A+++ M G +P+V Y + +
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFL 621
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 3/203 (1%)
Query: 79 ILKFFRDMKEKGILE-DPSV--YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLK 135
+L+ FR M G + P++ Y +++ S + + + ++ E + ++ F
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
+V Y + G V + + A L+ ++ G + + A +V+ + +G
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C +V+Y ++I+ C G ++A K+F +M + V Y+ ++ +GR +A+
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319
Query: 256 RLVAKMKPKGCEPNVWIYNSLMD 278
L +MK KGCEPNV Y L+D
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLID 342
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 121/299 (40%), Gaps = 34/299 (11%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
++ +K+ G+ + Y +++ + K+G K+ + E D +++ Y +L +
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVG---KIDVAYSLLERMLNDACLPNSYTYNVLIEG 553
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K + E M G+ Y LI A ++F G D
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVY 188
+ + + Y +GM+E+ +V+ M N E + D ++ V+++G+++ A
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKM-NEEGILPDLVTYTVLIDGYARLGLTHRAFDFL 672
Query: 189 EQLISQGCIPGQVTYASIINAYCR----------IGL-------------------YSKA 219
+ ++ GC P + +I IG+ Y A
Sbjct: 673 KCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIA 732
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K+F +M + G V Y +++A + + R+ +A LV MK +G P+ IYNSL+D
Sbjct: 733 LKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 29/329 (8%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC---- 67
+M G D Y I++ K G LE + L+ PS ++C
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEG--------HLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 68 -DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L + R E + +M +K D + L+ F V EL ++ G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ + ++ + +EG++++ + +++SM + + +++ G + A +
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ Q+I QGC P VT+ ++IN C+ GL +A ++ +M G +++YS+++ G
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRAKNLRQLEK------------ 291
K G+ +A+ L+ M KG PN IY+S+ + GR + Q+
Sbjct: 508 KAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAV 567
Query: 292 -YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y VIS+ E D + F+ NG
Sbjct: 568 LYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 121/273 (44%), Gaps = 7/273 (2%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + + + L GR + L+ +M KG P +Y ++ + + +
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYI-EEGMVEKTLEVVESMK--NAELNISDCISCVIVN 173
+ + KG D LVL I E+G V++ + ++ + E +I + ++
Sbjct: 168 VLEAMHAKGCTLDTG-NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA--VLK 224
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G + + ++ ++++ C P VT+ ++I CR GL+ + +V +M + G
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYT 293
+ Y++++ K G + A ++ +M G +PNV YN+++ A+ ++ E+
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
+ + + + D+ +F G++DR +
Sbjct: 345 SEMFQKDCPLD-DVTFNILVDFFCQNGLVDRVI 376
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/279 (18%), Positives = 116/279 (41%), Gaps = 13/279 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAAL-----FLECESRKLDLTPS 58
++ + E M + G LD+G ++ A + G ++ L F CE+ +
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVS---- 218
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
Y + L + R ++ + +M + + +LI + E+
Sbjct: 219 ----YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ E G D+ ++ ++ +EG +E E++ M + L + ++ G
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A ++ ++ + C VT+ +++ +C+ GL + ++ +M G V+ Y
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++++ + K G I +A+ L+ M GC+PN Y ++
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 77/174 (44%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + L + L K G + ++ + M G D Y+++I + + A E
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L KG+ + ++ + EG V K +++ +++K+ + + +++
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
KR A+ + ++S GC+P + TY +I GL +A+++ E+ +G
Sbjct: 578 KRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 5/231 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + K G E + + M G + Y ++ S AEEL +
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
++G + F L+ ++G+VE+ +E+++ M + D IS +++G K
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS-PDLISYSTVIDGLGKAGKT 512
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++ ++++G P + Y+SI A R G +K ++F ++ V Y+++
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRAKNLRQL 289
++ K A+ A M GC PN Y L + G AK ++L
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%)
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
EEL E ++ F L+ G+ E+ EV+ M + I++G
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K A ++ ++ S G P V Y +++ C + +AE++ EM QK
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V ++ +V + + G + + L+ +M GC P+V Y ++++
Sbjct: 356 DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 3/126 (2%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
++ L M + GI ++ Y I A + G KV +F ++ K S +
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMF---DNIKDTTIRSDAVL 568
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + SL K + FF M G + + S Y LI AS K A+EL E
Sbjct: 569 YNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELC 628
Query: 123 EKGMLR 128
+G LR
Sbjct: 629 SRGALR 634
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 29/329 (8%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC---- 67
+M G D Y I++ K G LE + L+ PS ++C
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEG--------HLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 68 -DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
L + R E + +M +K D + L+ F V EL ++ G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ D+ + ++ + +EG++++ + +++SM + + +++ G + A +
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+ Q+I QGC P VT+ ++IN C+ GL +A ++ +M G +++YS+++ G
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRAKNLRQLEK------------ 291
K G+ +A+ L+ M KG PN IY+S+ + GR + Q+
Sbjct: 508 KAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAV 567
Query: 292 -YTTVISAYNMAREFDMCVKFYNEFRMNG 319
Y VIS+ E D + F+ NG
Sbjct: 568 LYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 121/273 (44%), Gaps = 7/273 (2%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + + + L GR + L+ +M KG P +Y ++ + + +
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYI-EEGMVEKTLEVVESMK--NAELNISDCISCVIVN 173
+ + KG D LVL I E+G V++ + ++ + E +I + ++
Sbjct: 168 VLEAMHAKGCTLDTG-NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA--VLK 224
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G + + ++ ++++ C P VT+ ++I CR GL+ + +V +M + G
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYT 293
+ Y++++ K G + A ++ +M G +PNV YN+++ A+ ++ E+
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNGGVIDRAM 326
+ + + + D+ +F G++DR +
Sbjct: 345 SEMFQKDCPLD-DVTFNILVDFFCQNGLVDRVI 376
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/279 (18%), Positives = 116/279 (41%), Gaps = 13/279 (4%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAAL-----FLECESRKLDLTPS 58
++ + E M + G LD+G ++ A + G ++ L F CE+ +
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVS---- 218
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
Y + L + R ++ + +M + + +LI + E+
Sbjct: 219 ----YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ E G D+ ++ ++ +EG +E E++ M + L + ++ G
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A ++ ++ + C VT+ +++ +C+ GL + ++ +M G V+ Y
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
++++ + K G I +A+ L+ M GC+PN Y ++
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 77/174 (44%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P + + L + L K G + ++ + M G D Y+++I + + A E
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
L KG+ + ++ + EG V K +++ +++K+ + + +++
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
KR A+ + ++S GC+P + TY +I GL +A+++ E+ +G
Sbjct: 578 KRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 5/231 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + + K G E + + M G + Y ++ S AEEL +
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
++G + F L+ ++G+VE+ +E+++ M + D IS +++G K
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS-PDLISYSTVIDGLGKAGKT 512
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A+++ ++++G P + Y+SI A R G +K ++F ++ V Y+++
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL---MDMHGRAKNLRQL 289
++ K A+ A M GC PN Y L + G AK ++L
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%)
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
EEL E ++ F L+ G+ E+ EV+ M + I++G
Sbjct: 236 EELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
K A ++ ++ S G P V Y +++ C + +AE++ EM QK
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
V ++ +V + + G + + L+ +M GC P+V Y ++++
Sbjct: 356 DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 3/126 (2%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM 62
++ L M + GI ++ Y I A + G KV +F ++ K S +
Sbjct: 512 TEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMF---DNIKDTTIRSDAVL 568
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y + SL K + FF M G + + S Y LI AS K A+EL E
Sbjct: 569 YNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELC 628
Query: 123 EKGMLR 128
+G LR
Sbjct: 629 SRGALR 634
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Query: 37 DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
+S+ F E L TH+ KI+ + LG++ + DM +KG+ D
Sbjct: 131 NSDHALQFFRWVERAGLFRHDRDTHL-KII-EILGRASKLNHARCILLDMPKKGVEWDED 188
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
++ LI S+ V+ + ++F++ +E G+ R ++ + L + + G +M
Sbjct: 189 LFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAM 248
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
N + + +++ GF A + +E++ + P VTY ++IN Y RI
Sbjct: 249 LNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKM 308
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+AEK F+EM+ + + V++Y++M+ Y GR+ D +RL +MK G +PN Y++L
Sbjct: 309 EEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTL 368
Query: 277 M 277
+
Sbjct: 369 L 369
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 125/304 (41%), Gaps = 42/304 (13%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAF---YKIGDSEKVA-------------ALFL---- 46
L +E+MKS GI ++ Y ++ K+ +++ V ++F+
Sbjct: 347 LRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLIT 406
Query: 47 -ECESRKLDLT------------PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE 93
+C++ +LD P+ Y +L ++ KSG +K + EK I+
Sbjct: 407 CQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIIL 466
Query: 94 DP--------SVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGM 145
P S Y +I + + AE LF++ +KG ++D F L+ + +EG
Sbjct: 467 RPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKG-VQDPIAFNNLIRGHSKEGA 525
Query: 146 VEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYAS 205
E E+++ M E+ +++ F K+ A + +I G IP + S
Sbjct: 526 PESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRS 585
Query: 206 IINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKG 265
++ + G A +V M +KG + + + ++ G + +A+ + + G
Sbjct: 586 VMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNG 645
Query: 266 CEPN 269
CEP+
Sbjct: 646 CEPD 649
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 114/282 (40%), Gaps = 54/282 (19%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGIL-EDPSVYASLICSFASIAEVKV 113
L P H ++ + L S + L+FFR ++ G+ D + +I +++
Sbjct: 113 LVPQFDH--SLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNH 170
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A + + +KG+ D ++F+ L+ Y + G+V+++++V + MK EL + I
Sbjct: 171 ARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMK--ELGVERTIK----- 223
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+Y ++ R G Y A++ F M +G
Sbjct: 224 ----------------------------SYDALFKVILRRGRYMMAKRYFNAMLNEGVMP 255
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK-- 291
Y+ M+ + + ++ A R +MK + P+V YN++++ + R K + + EK
Sbjct: 256 TCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFF 315
Query: 292 --------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
YTT+I Y D ++ + E + G
Sbjct: 316 VEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFG 357
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P Y++L +S K G + M E G + D S++ S++ S ++ A
Sbjct: 542 PREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASR 601
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA--ELNISDCISCVIVNG 174
+ EKG+ ++++ K++ + G VE+ L ++ + N E + +S + G
Sbjct: 602 VMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPDFDGLLSVLCAKG 661
Query: 175 ----------FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY---CRI 213
F R Y + YE ++ +T +NAY C+I
Sbjct: 662 KTIAALKLLDFGLERDYNISFSSYENVLD-----ALLTAGKTLNAYSILCKI 708
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 142/313 (45%), Gaps = 48/313 (15%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM-Y 63
S L + M G + ++ Y +++ + IGD+EK ++ + L P+ T + Y
Sbjct: 418 SALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSML----TNMLKGRPTPTLVTY 473
Query: 64 KIL----CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
I+ CDS G + A +L+ MK G D Y LI F I+++++A +F
Sbjct: 474 NIIIKGYCDS-GDTDVAIRVLEL---MKANGCQPDEWSYTELISGFCKISKMELASGMFN 529
Query: 120 EAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA-------------------- 159
E ++G+ + + L+ Y ++ ++ ++E MK +
Sbjct: 530 EMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQN 589
Query: 160 -------------ELNIS-DCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
E IS D ++ ++NG A A++++ +++ GC+P TY+
Sbjct: 590 NFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYS 649
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
S+I A + G +AE++F E++++G V Y M+ + +G++ A + +M
Sbjct: 650 SLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINA 709
Query: 265 GCEPNVWIYNSLM 277
GC+P + Y+ L+
Sbjct: 710 GCQPTLQTYDVLI 722
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 82 FFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYI 141
F M G++ + Y +L+ E+ A +F + G L + + +L+ Y
Sbjct: 387 LFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYC 446
Query: 142 EEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQV 201
G EK + ++ +M + +I+ G+ A++V E + + GC P +
Sbjct: 447 TIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEW 506
Query: 202 TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKM 261
+Y +I+ +C+I A +F EM +G V Y+++++ Y K ++ A R++ +M
Sbjct: 507 SYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERM 566
Query: 262 KPKGCEPNVWIYNSLMDMHGRAK 284
K GC PNV YN L +HG K
Sbjct: 567 KRSGCRPNVQTYNVL--IHGLTK 587
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 6/239 (2%)
Query: 40 KVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEK-GILEDPSVY 98
KVA LE R + + HM K C + + +A L F K G+ Y
Sbjct: 142 KVAMRLLESRDRPAAVGRARIHMIKS-CSNKAEMTQALNYLDMFSQRGPKMGLF----TY 196
Query: 99 ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+L+ + + + + +G+ +L ++ ++ ++G V ++ +
Sbjct: 197 TTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFK 256
Query: 159 AELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK 218
+ + ++ G+ + R +A +++ ++ +GC P TY+++IN C G ++
Sbjct: 257 SGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNE 316
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
A EM + G V +++ + GRI DA ++ MK KGC+PNV+ Y SL+
Sbjct: 317 ALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLI 375
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 5/218 (2%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y L L K ++ + + +G+ + +Y S+I + V+ AE + +
Sbjct: 196 YTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVF 255
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ GM D + ++L Y ++ E+ M + ++NG
Sbjct: 256 KSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVN 315
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A+ ++ G +P T+ + I A C +G A K+FI+M++KG V Y+S++
Sbjct: 316 EALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLI 375
Query: 243 AMYGKTGRI-RDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ G+ R+ R A+ L +M G PN YN+LM++
Sbjct: 376 S--GQ--RVSRMAIGLFHRMSRDGVVPNTVTYNALMNV 409
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 115/270 (42%), Gaps = 22/270 (8%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGD---SEKVAALFLECESRKLDLTPSSTHMYKILC 67
E+MK +G + Y ++ K + +E++ + LE E D+ Y +
Sbjct: 564 ERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLE-EKISPDVV-----TYSTVI 617
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ L +G L+ F M + G L + Y+SLI + V+ AEE+F E +++G++
Sbjct: 618 NGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLI 677
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D ++K++ + + G V++ + + M NA + V++ G Y V +
Sbjct: 678 PDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVAL 737
Query: 188 YEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGK 247
S Q+ +I+ L SK ++ E+ ++ +D ++++ +
Sbjct: 738 -PNAASTSTFDDQIINKDVISV-----LSSKLAELDFELSRQLYD-------ALLSRLSR 784
Query: 248 TGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+GR +A L M + PN Y +
Sbjct: 785 SGRWFEANNLYRSMVSQSQCPNQDTYKHFL 814
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 100/240 (41%), Gaps = 22/240 (9%)
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
H Y L +LG+ GR E + F ++K++G++ D Y +I +V A + E
Sbjct: 646 HTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGE 705
Query: 121 AEEKGMLRDLE-------------VFLKLVLM-------YIEEGMVEKTLEVVESMKNAE 160
G L+ V+ KLV + ++ ++ K + V S K AE
Sbjct: 706 MINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAE 765
Query: 161 LN--ISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSK 218
L+ +S + +++ S+ ++ A +Y ++SQ P Q TY + + R
Sbjct: 766 LDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDL 825
Query: 219 AEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
A VF M + + + Y ++ + R ++A + KM + + ++ L++
Sbjct: 826 AMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILIN 885
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 188 YEQLISQ-GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
Y + SQ G G TY +++ ++ + S + ++ ++G ++ Y+S++
Sbjct: 180 YLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALC 239
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
K G +RDA ++ K+ G +P+ + Y S++ + R ++L
Sbjct: 240 KDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDL 279
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 128/279 (45%), Gaps = 9/279 (3%)
Query: 12 KMKSAGIVLDSG----CYCQIMEAFYKI----GDSEKVAALFLECESRKLDLTPSSTHMY 63
K+K A VLD CY ++ I DS A+ L E RK P Y
Sbjct: 223 KLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV-TY 281
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
+L + + K GR E +KF +M G + + ++ S S AE L +
Sbjct: 282 NVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLR 341
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
KG + F L+ + ++ + ++V+E M + +++GF + +
Sbjct: 342 KGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDR 401
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A++ E ++S+GC P VTY +++ A C+ G A ++ ++ KG ++ Y++++
Sbjct: 402 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVID 461
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGR 282
K G+ A+ L+ +M+ KG +P++ Y++L+ GR
Sbjct: 462 GLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGR 500
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 10/229 (4%)
Query: 50 SRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA 109
SR + S+ H+ K++ ++G E LKF M +G + D SLI F
Sbjct: 101 SRSFEEFASNIHLRKLV-----RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSG 155
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS- 168
+ K A + + E G + D+ + L+ Y + G ++K LEV+E M A D ++
Sbjct: 156 KTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA----PDVVTY 211
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
I+ A++V ++ + + C P +TY +I A C +A K+ EM++
Sbjct: 212 NTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRK 271
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
KG VV Y+ ++ K GR+ +A++ + M GC+PNV +N ++
Sbjct: 272 KGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIIL 320
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 12/277 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAAL--FLECESRKLDLTPSSTHMYK 64
L + E+M G + D ++ F + G ++K + LE D+ Y
Sbjct: 126 LKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI-----TYN 180
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+L KSG EI K ++ + D Y +++ S ++K A E+ ++
Sbjct: 181 VLIGGYCKSG---EIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQR 237
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
D+ + L+ + V + +++++ M+ V++NG K A
Sbjct: 238 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 297
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+K + S GC P +T+ I+ + C G + AE++ +M +KG VV ++ ++
Sbjct: 298 IKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINF 357
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
+ + A+ ++ KM GC PN YN L +HG
Sbjct: 358 LCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPL--LHG 392
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 80/209 (38%), Gaps = 27/209 (12%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM-------- 62
EKM G V +S Y ++ F C+ +K+D +
Sbjct: 372 EKMPKHGCVPNSLSYNPLLHGF---------------CQEKKMDRAIEYLEIMVSRGCYP 416
Query: 63 ----YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
Y L +L K G+ ++ + KG Y ++I + + + A EL
Sbjct: 417 DIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELL 476
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+E KG+ D+ + L+ EG V++ +++ M+ + S I+ G K
Sbjct: 477 EEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 536
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASII 207
+ A+ ++ +GC P + TY +I
Sbjct: 537 QQTSRAIDFLAYMVEKGCKPTEATYTILI 565
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 128/275 (46%), Gaps = 17/275 (6%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+Y+E+MK I ++ Y ++ K G KVA + + + T + C
Sbjct: 213 YYFEEMKHTAIP-NNWTYTVVINGLVKAG---KVAEAERVLQEMPVPTLANYTSVIGGHC 268
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ G G+A+ +L+ DMK KG D Y +LI + E+ A EL +E + +
Sbjct: 269 KA-GDMGKAYHLLE---DMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFV 324
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI-----VNGFSKRRAYW 182
D+ + L+ + + +++ +++N + DC V+ ++GFSK
Sbjct: 325 PDIFTYDILIAGLCRAKRLSEARDLLGTLRNED----DCTPNVVSYNTLIDGFSKAARVN 380
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +++ ++++ G P VTY+++I C G S+A EM K V YSS++
Sbjct: 381 DAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVI 440
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ + G + A + M GC+PN+ +YNSL+
Sbjct: 441 SGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLI 475
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 123/290 (42%), Gaps = 39/290 (13%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ H Y ++L ++G+ E + F++ + ++ D Y LI + ++K+A L+
Sbjct: 89 TVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLY 148
Query: 119 KEAEEKGMLRDLEVFLKLVLMYI-EEGMVEKTLEVVESMKNAELNISDCISC-----VIV 172
+E ++G LR + + K +L + + G +E L E M + I C +++
Sbjct: 149 EEMVDRG-LRPVVLTCKFLLNALCKSGNLELALRYFEKMSS--------IPCAATWTILI 199
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+G + A +E++ IP TY +IN + G ++AE+V EM
Sbjct: 200 DGLFRAIRVDEACYYFEEM-KHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVP--- 255
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKY 292
+ Y+S++ + K G + A L+ MK KG + + YN+L+ H R +
Sbjct: 256 -TLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQ-------- 306
Query: 293 TTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
E D + E + N V D I++ + ++ E
Sbjct: 307 -----------EIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSE 345
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 130/287 (45%), Gaps = 14/287 (4%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N + L Y+EKM S + + + +++ ++ ++ F E K P++
Sbjct: 175 NLELALRYFEKMSS---IPCAATWTILIDGLFRAIRVDEACYYF---EEMKHTAIPNN-W 227
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y ++ + L K+G+ E + ++M + + Y S+I ++ A L ++
Sbjct: 228 TYTVVINGLVKAGKVAEAERVLQEMPVPTL----ANYTSVIGGHCKAGDMGKAYHLLEDM 283
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRA 180
+ KG D + L+ + +++ E++E MK+ + + D + +++ G + +
Sbjct: 284 KRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDF-VPDIFTYDILIAGLCRAKR 342
Query: 181 YWAAVKVYEQLISQG-CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
A + L ++ C P V+Y ++I+ + + + A ++F+EM G VV YS
Sbjct: 343 LSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYS 402
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL 286
+++ GR +A + +M K P V +Y+S++ RA L
Sbjct: 403 TLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGEL 449
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 97/239 (40%), Gaps = 7/239 (2%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D TP+ Y L D K+ R + + F +M G D Y++LI +
Sbjct: 358 DCTPNVVS-YNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASE 416
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A +E K +L + V+ ++ G ++ V +SM + + ++
Sbjct: 417 AHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIY 476
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
G K A +++ +GC P VTY ++I CR +A +++ ++G +
Sbjct: 477 GLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIE- 535
Query: 234 CVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL---RQL 289
++ +S + + A R++ + G P + Y ++++ + NL RQL
Sbjct: 536 --ISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQL 592
>gi|255661178|gb|ACU25758.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 352
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 142/302 (47%), Gaps = 17/302 (5%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R+ L+P + Y L GK G L + + M++ + D +Y++LI + +
Sbjct: 1 RERALSPDR-YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSXKLCD 59
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
A +F + G + DL + ++ ++ + + + ++ M+ A + +
Sbjct: 60 YSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYST 119
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ + + + + A+ V+ ++ C+ T +I+ Y ++G+ +A+K+F M++ G
Sbjct: 120 LLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 179
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------RAK 284
+ VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G +A
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239
Query: 285 NL------RQLEK----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
NL R +E Y+T+IS + + D + + R +G ID+ + M+ +
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAY 299
Query: 335 SK 336
+
Sbjct: 300 ER 301
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L + +KM+ + D Y ++E K+ D K ++F ++ P Y
Sbjct: 27 AALSWLQKMEQDRVPGDLVLYSNLIELSXKLCDYSKAISIF--SRLKRSGFMPDLV-AYN 83
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ + GK+ E +M+ G++ + + Y++L+ + + A +F E E
Sbjct: 84 AMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREI 143
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
L DL ++ +Y + GM ++ ++ M+ + + ++ + + A
Sbjct: 144 KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEA 203
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ + + VTY S++ Y + + KA + EMQ +G + + YS+++++
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISI 263
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+GK G++ A L K++ G E + +Y +++ + RA
Sbjct: 264 WGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERA 302
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 127/272 (46%), Gaps = 18/272 (6%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECES-----RKLDLTPSSTHMYK 64
+ ++K +G + D Y ++ F K A LF E S R + P+ T Y
Sbjct: 67 FSRLKRSGFMPDLVAYNAMINVFGK-------AKLFREARSLISEMRTAGVMPN-TASYS 118
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L ++ + E L F +M+E L D + +I + + K A++LF +
Sbjct: 119 TLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 178
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRRAYW 182
G+ ++ + L+ +Y + + + + + M KN E N+ S +++ G K +
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG--KTLEHE 236
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + +++ ++G P +TY++II+ + ++G +A +F +++ G + V Y +M+
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 296
Query: 243 AMYGKTGRIRDAMRLVAKMK-PKGCEPNVWIY 273
Y + G + A RL+ ++K P ++ I+
Sbjct: 297 VAYERAGLVAHAKRLLHELKRPDNIPRDIAIH 328
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQ-VTYASIINAYCRIGLYSKAEKVFIEMQ 227
++ F K + AA+ + Q + Q +PG V Y+++I ++ YSKA +F ++
Sbjct: 13 STLITHFGKEGLFDAALS-WLQKMEQDRVPGDLVLYSNLIELSXKLCDYSKAISIFSRLK 71
Query: 228 QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLR 287
+ GF +VAY++M+ ++GK R+A L+++M+ G PN Y++L+ M+ K
Sbjct: 72 RSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENK--- 128
Query: 288 QLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
K+ +S + RE C+ +D IM+ V+ +L +E
Sbjct: 129 ---KFLEALSVFAEMREIK-CL------------LDLTTCNIMIDVYGQLGMAKE 167
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 116/240 (48%), Gaps = 2/240 (0%)
Query: 38 SEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSV 97
SE F E L TH+ KI+ + LG++ + DM +KG+ D +
Sbjct: 25 SEHALQFFRWVERSNLFEHNRETHL-KII-EILGRASKLNHARCILLDMPKKGLEWDEDM 82
Query: 98 YASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMK 157
+ +I S+ V+ + ++F++ EE G+ R ++ + L + + G M
Sbjct: 83 WVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKML 142
Query: 158 NAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
+ + + V++ GF A + +E + S+ P VTY ++IN Y R+
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKME 202
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+AEK F+EM+ + + VV Y++++ Y ++ DA+RLV +MK G +PN Y++L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLL 262
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 122/278 (43%), Gaps = 13/278 (4%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
++E MKS I D Y ++ +Y++ E+ F+E + R ++ T + Y L
Sbjct: 172 FFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVT---YTTLIK 228
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML- 127
+ + L+ +MK GI + Y++L+ + ++ A + KE +K +
Sbjct: 229 GYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAP 288
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKV 187
D +F++L+ + + G ++ +V+++M + +++ F K Y AVK+
Sbjct: 289 TDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKL 348
Query: 188 YEQLISQGCI--PGQV------TYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYS 239
++LI + I P Y +I C G SKAE + ++ + G A +
Sbjct: 349 LDKLIEKDIILRPQSTLHLEPNAYNPMIEYLCNNGQASKAETLVRQLMKLGVQDP-TALN 407
Query: 240 SMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+++ + + G A L+ M + + YNSL+
Sbjct: 408 TLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLV 445
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 121/283 (42%), Gaps = 54/283 (19%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILE-DPSVYASLICSFASIAEVK 112
+L PS H +++ + L S + L+FFR ++ + E + + +I +++
Sbjct: 5 NLVPSFDH--ELVYNVLHSSNTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 113 VAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIV 172
A + + +KG+ D ++++ ++ Y +EG+V++++++ + M+ EL + I
Sbjct: 63 HARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME--ELGVERTIK---- 116
Query: 173 NGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFD 232
+Y ++ R G Y A++ F +M +G +
Sbjct: 117 -----------------------------SYNALFKVILRRGRYMMAKRYFNKMLSEGIE 147
Query: 233 KCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK- 291
++ M+ + +G++ A R MK + P+V YN++++ + R K + + EK
Sbjct: 148 PTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKY 207
Query: 292 ---------------YTTVISAYNMAREFDMCVKFYNEFRMNG 319
YTT+I Y + D ++ E + +G
Sbjct: 208 FVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGSG 250
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 9/240 (3%)
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
I+ L ++G FE + R+M K + D Y +LI ++K A L E E
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
G + L+ ++G +++ +E++E+MK + + +++GF
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
+++++++ +G VTY+ +++ CR+G + +A V M + G VV Y+ ++
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAR 303
K GR AM L+ M KG EP+ YN L L L K VI A+ + R
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVL---------LSGLCKEGLVIDAFKILR 232
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 11/228 (4%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
PS+ Y +L L K G + K R M EKG D Y +L+ +V A +
Sbjct: 206 PSNV-TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALK 264
Query: 117 LFKEA--EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN- 173
LF E + ++ F L+ +EG + K +++ M + C + V N
Sbjct: 265 LFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKM----VKKGSCGNLVTYNM 320
Query: 174 ---GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
G K A+++++Q++ G +P TY+ +I+ +C++ + + A+ +F EM+ G
Sbjct: 321 LLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 380
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ + Y++++A K G + A L +M CEP++ +N+++D
Sbjct: 381 LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID 428
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 38/253 (15%)
Query: 25 YCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFR 84
Y ++ K ++ L LE E+ P+S ++ D L K GR E ++
Sbjct: 36 YNTLINGLCKAKKLKEAVGLLLEMEAA--GCFPNSVTCTTLM-DGLCKDGRMDEAMELLE 92
Query: 85 DMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEG 144
MK+KG D +Y +LI F + + +ELF E KG+ ++ +
Sbjct: 93 AMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTY----------- 141
Query: 145 MVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYA 204
SC +V+G + + A V + G P VTY
Sbjct: 142 -----------------------SC-LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYT 177
Query: 205 SIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPK 264
+I+ C+ G + A + M +KG + V Y+ +++ K G + DA +++ M K
Sbjct: 178 GLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 237
Query: 265 GCEPNVWIYNSLM 277
G + +V YN+LM
Sbjct: 238 GKKADVVTYNTLM 250
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 131/326 (40%), Gaps = 21/326 (6%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M++AG +S +M+ K G ++ L + + D + +Y L
Sbjct: 58 EMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFD---ADVVLYGTLISGFC 114
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+G + F +M KGI + Y+ L+ + + K A + E G+ D+
Sbjct: 115 NNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVV 174
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ ++G ++++ M S+ V+++G K A K+ +
Sbjct: 175 TYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM 234
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEM--QQKGFDKCVVAYSSMVAMYGKTG 249
I +G VTY +++ C G +A K+F M + + V ++ ++ K G
Sbjct: 235 IEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 294
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQLEK-------------YT 293
R+ A+++ KM KG N+ YN L+ G+ K +L K Y+
Sbjct: 295 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 354
Query: 294 TVISAYNMAREFDMCVKFYNEFRMNG 319
+I + R ++ + E R +G
Sbjct: 355 ILIDGFCKMRMLNIAKGLFCEMRTHG 380
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 2/204 (0%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L K+G+ E ++ ++ + + G + + Y+ LI F + + +A+ LF E
Sbjct: 318 YNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMR 377
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAY 181
G+ L + L+ +EG +E+ + + M NA D IS +++G K +
Sbjct: 378 THGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE-PDIISFNTMIDGTLKAGDF 436
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
++ +++ G P +T++++IN ++G +A+ M GF + Y S+
Sbjct: 437 QFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL 496
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKG 265
+ G + + L+ +M KG
Sbjct: 497 LKGLSSKGDTTEIINLLHQMAAKG 520
>gi|255661150|gb|ACU25744.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
gi|255661152|gb|ACU25745.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 426
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 140/302 (46%), Gaps = 17/302 (5%)
Query: 51 RKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAE 110
R+ L+P + Y L GK G L + + M++ + D +Y++LI + +
Sbjct: 1 RERALSPDR-YTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 59
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
A +F + G DL + ++ ++ + + + ++ MK A +
Sbjct: 60 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYST 119
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ + + + + A+ ++ ++ C+ T +I+ Y ++G+ +A+K+F M++ G
Sbjct: 120 LLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 179
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG------RAK 284
+ VV+Y++++ +YG +A+ L M+ K E NV YNS+M ++G +A
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 239
Query: 285 NL------RQLEK----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
NL R +E Y+T+IS + + D + + R +G ID+ + M+ +
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 335 SK 336
+
Sbjct: 300 ER 301
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L + +KM+ + D Y ++E K+ D K ++F ++ TP Y
Sbjct: 27 AALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF--SRLKRSGFTPDLV-AYN 83
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ + GK+ E +MK G+ D + Y++L+ + + A +F E E
Sbjct: 84 AMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTLLTMYVENKKFLEALSIFAEMREI 143
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
L DL ++ +Y + GM ++ ++ M+ + + ++ + + A
Sbjct: 144 KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEA 203
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
+ ++ + + VTY S++ Y + + KA + EMQ +G + + YS+++++
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISI 263
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA 283
+GK G++ A L K++ G + + +Y +++ + RA
Sbjct: 264 WGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERA 302
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 150/333 (45%), Gaps = 30/333 (9%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRK--LDLTPSSTHMYKILCDS 69
+MK+AG+ D+ Y ++ + + + ++F E K LDLT + I+ D
Sbjct: 104 EMKTAGVTPDTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCN-----IMIDV 158
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
G+ G A E K F M++ GI + Y +L+ + A LF+ + K + ++
Sbjct: 159 YGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYE 189
+ + ++++Y + EK +++ M+N + + I++ + K A +++
Sbjct: 219 VVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 190 QLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTG 249
+L S G QV Y ++I AY R GL + A+++ E+++ +A + + G
Sbjct: 279 KLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIA----IHILAGAG 334
Query: 250 RIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCV 309
RI +A W++ +D G K++ E+ + S Y +++ V
Sbjct: 335 RIEEA---------------TWVFRQAIDA-GEVKDITVFERMIHLFSKY---KKYGNVV 375
Query: 310 KFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ +++ R G D + +++ + KL + ++
Sbjct: 376 EVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDK 408
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
+H + M+ I + Y +M + K + EK L E ++R ++ P+S Y +
Sbjct: 204 IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIE--PNSI-TYSTI 260
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK-G 125
GK G+ F+ ++ G+ D +Y ++I ++ V A+ L E +
Sbjct: 261 ISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAV 185
+ RD+ + + G +E+ V +A + +++ FSK + Y V
Sbjct: 321 IPRDIAIHI-----LAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVV 375
Query: 186 KVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
+V++++ G P A ++NAY ++ + KA V++EMQ+ G
Sbjct: 376 EVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
++M+ +GI + Y+++I + + ++ A LF++ G+ D ++ +++ Y
Sbjct: 240 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 299
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK-RRAYWAAVKVYEQLISQGCIPG 199
G+V ++ +K + NI I+ I+ G + A W V+ Q I G +
Sbjct: 300 ERAGLVAHAKRLLHELKRPD-NIPRDIAIHILAGAGRIEEATW----VFRQAIDAGEVKD 354
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGF--DKCVVAYSSMVAMYGKTGRIRDAMRL 257
+ +I+ + + Y +VF +M+ G+ D V+A ++ YGK A +
Sbjct: 355 ITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIAL--VLNAYGKLHEFDKANDV 412
Query: 258 VAKMKPKGC 266
+M+ GC
Sbjct: 413 YMEMQEVGC 421
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 2/241 (0%)
Query: 37 DSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
++E F E L TH+ KI+ + LG++ + DM +KG+ D
Sbjct: 24 NAEHALQFFRWVERSNLFEHNRETHL-KII-EILGRASKLNHARCILLDMPKKGLEWDXD 81
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
++ +I S+ V+ + +LF++ EE G+ R ++ + L + + G M
Sbjct: 82 MWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKM 141
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
+ + + V++ GF A + +E + S+ P +TY ++IN Y R+
Sbjct: 142 LSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKM 201
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+AEK F+EM+ K + VV Y++++ Y ++ DA+RLV +MK G +PN Y++L
Sbjct: 202 EEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTL 261
Query: 277 M 277
+
Sbjct: 262 L 262
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 108/259 (41%), Gaps = 4/259 (1%)
Query: 4 QSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMY 63
Q + ++KM+ G+ Y + + + G F + S ++ T H +
Sbjct: 97 QESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPT---RHTF 153
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
++ SG+ +FF DMK + I D Y ++I + + +++ AE+ F E +
Sbjct: 154 NVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKG 213
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWA 183
K + ++ + L+ Y+ V+ L +VE MK + + ++ G
Sbjct: 214 KNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSE 273
Query: 184 AVKVYEQLISQGCIPGQVT-YASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A + ++++ + P + + +I++ C+ G A V M + Y ++
Sbjct: 274 ARSILKEMLDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLI 333
Query: 243 AMYGKTGRIRDAMRLVAKM 261
Y K G+ A++L+ K+
Sbjct: 334 ENYCKAGQYDQAVKLLDKL 352
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 137/312 (43%), Gaps = 32/312 (10%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE--------------------C 48
Y+ +MK G++ + + ++AF K G + LF + C
Sbjct: 286 YFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTC 345
Query: 49 ESRKLD----LT--------PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPS 96
++ +LD LT P + Y +L D L K G+ E FR M+ GI +
Sbjct: 346 KAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANEL 405
Query: 97 VYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM 156
+Y +LI + A L E ++KGM D+ ++ L+ +++ ++ M
Sbjct: 406 LYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKM 465
Query: 157 KNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLY 216
L ++ I I++ K R A+ + ++++ G P VTY ++++ C+ G
Sbjct: 466 DECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSI 525
Query: 217 SKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSL 276
+A F +M G + V AY+++V K GR+ A+ L+ +M KG + + SL
Sbjct: 526 DEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSL 585
Query: 277 MDMHGRAKNLRQ 288
MD H + NL+
Sbjct: 586 MDGHLKQGNLQD 597
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%)
Query: 55 LTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVA 114
L + + I+ D L K G E MK G D Y SLI + E++
Sbjct: 189 LPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEV 248
Query: 115 EELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNG 174
E+L E G D+ + LV + + G +E+ MK + + V+
Sbjct: 249 EKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDA 308
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
F K A+K++ Q+ +G P +VTY +++ C+ G A + EM Q+G
Sbjct: 309 FCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLN 368
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
VV Y+ +V K G++ +A + M+ G N +Y +L+ H KN
Sbjct: 369 VVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKN 419
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 120/270 (44%), Gaps = 9/270 (3%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLE---CESRKLDLTPSSTHMYKILCD 68
+MK+ G D Y +++ + K G+ E+V L E C R +T Y L +
Sbjct: 219 RMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVT------YNALVN 272
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
K GR +F +MK +G++ + +++ + +F V+ A +LF + KGM
Sbjct: 273 CFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKP 332
Query: 129 DLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVY 188
+ + LV + G ++ L + M + ++ V+V+G K A V+
Sbjct: 333 NEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVF 392
Query: 189 EQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKT 248
+ G ++ Y ++I+ + +A + EM+ KG + V Y +++
Sbjct: 393 RLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNL 452
Query: 249 GRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ +A L+ KM G +PN IY ++MD
Sbjct: 453 QKLDEAKSLLNKMDECGLKPNNVIYTNIMD 482
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 175 FSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
++ R+ A +++EQL + P T+ +I+ C+ G ++A + M+ G
Sbjct: 173 LARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPD 228
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
VV Y+S++ YGK G + + +LV +M+ GC P+V YN+L++
Sbjct: 229 VVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVN 272
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/264 (18%), Positives = 115/264 (43%), Gaps = 9/264 (3%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLD---LTPS 58
NS+ L +MK G+ LD Y ++ + ++ +L K+D L P+
Sbjct: 419 NSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLL-----NKMDECGLKPN 473
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
+ +Y + D+ K+ + E + + M + G + Y +L+ + A F
Sbjct: 474 NV-IYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHF 532
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ + G+ +++ + LV + G ++K + +++ M + +++ + + +++G K+
Sbjct: 533 NKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQ 592
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
A + ++I+ G Y + +C + + +A +V EM + G V Y
Sbjct: 593 GNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVY 652
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMK 262
+ ++ K G + +A L +M+
Sbjct: 653 NCLINKCQKLGNMEEAAILQNEME 676
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 35/127 (27%)
Query: 195 GCIPGQVTYASII-----------------------------------NAYCRIGLYSKA 219
GC P VTY S+I N +C+ G +A
Sbjct: 224 GCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERA 283
Query: 220 EKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
F EM+++G VV +S+ V + K G +R+AM+L A+M+ KG +PN Y L+D
Sbjct: 284 YSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDG 343
Query: 280 HGRAKNL 286
+A L
Sbjct: 344 TCKAGRL 350
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 140/316 (44%), Gaps = 40/316 (12%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L ++ +M++ GI + Y ++ +F G + A L + +RK+ TP+ + L
Sbjct: 285 LSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKI--TPNVV-TFSAL 341
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
DSL K G+ E + +M +GI + Y SLI + + A ++ KG
Sbjct: 342 IDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGC 401
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAV 185
D+ + L+ + + V+ + + M + I+D ++ ++ GF + R A
Sbjct: 402 DPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGM-IADTVTYSTLIQGFCQSRKLIVAK 460
Query: 186 KVYEQLISQGCIPGQVTYASIINAYC----------------------RIGLYS------ 217
KV+++++SQG PG +TYA +++ C IG+Y+
Sbjct: 461 KVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGM 520
Query: 218 -KAEKV------FIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNV 270
A KV F + KG + + +Y+ M++ K + +A L KMK G EP+
Sbjct: 521 CNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDG 580
Query: 271 WIYNSLMDMHGRAKNL 286
YN+L+ H R ++
Sbjct: 581 CTYNTLIRAHLRGNDI 596
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 110/266 (41%), Gaps = 38/266 (14%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M + G + Y I+ K G++ L + E RK+ Y I+ D+L
Sbjct: 220 RMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKI---KPHVVTYTIIIDNLC 276
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K GR + L FF +M+ KGI + Y SLI SF S +L ++ + + ++
Sbjct: 277 KDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVV 336
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
F L+ ++EG + + A +Y ++
Sbjct: 337 TFSALIDSLVKEGKLTE-----------------------------------AKDLYNEM 361
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
I++G P +TY S+I C +A ++ M KG D + Y+ ++ + K ++
Sbjct: 362 ITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQV 421
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLM 277
D MRL KM +G + Y++L+
Sbjct: 422 DDGMRLFRKMSLRGMIADTVTYSTLI 447
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 2/200 (1%)
Query: 79 ILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVL 138
+L + M+ KGI D +I F ++ A + + G + F L+
Sbjct: 109 VLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLN 168
Query: 139 MYIEEGMVEKTLEVVESMKNAELNISDCISC-VIVNGFSKRRAYWAAVKVYEQLISQGCI 197
EG V + +E+V+ M ++ ++ D I+ IVNG + AV + ++++ GC
Sbjct: 169 GLCLEGRVFEAVELVDCMVLSQ-HVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQ 227
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P Q TY I+N C+ G + A + +M+ + VV Y+ ++ K GR+ DA+
Sbjct: 228 PNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSF 287
Query: 258 VAKMKPKGCEPNVWIYNSLM 277
++M+ KG + NV+ YNSL+
Sbjct: 288 FSEMETKGIKANVFTYNSLI 307
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 109/217 (50%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y IL + K+ + + ++ FR M +G++ D Y++LI F ++ VA+++F+E
Sbjct: 408 YNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMV 467
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+G+ + + L+ + G +E+ L +++ M ++ + I +I++G
Sbjct: 468 SQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVD 527
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++ L S+G +Y +++ C+ S+A+ +F +M++ G++ Y++++
Sbjct: 528 DAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLI 587
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM 279
+ + I +++L+ +MK G + +MDM
Sbjct: 588 RAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDM 624
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/261 (17%), Positives = 111/261 (42%), Gaps = 16/261 (6%)
Query: 75 RAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFL 134
R E + M G + Y ++ A +L ++ E + + + +
Sbjct: 210 RVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYT 269
Query: 135 KLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQ 194
++ ++G ++ L M+ + + ++ F + ++ +I++
Sbjct: 270 IIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITR 329
Query: 195 GCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
P VT++++I++ + G ++A+ ++ EM +G + + Y+S++ R+ +A
Sbjct: 330 KITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEA 389
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN----LRQLEK------------YTTVISA 298
+++ M KGC+P++W YN L++ +AK +R K Y+T+I
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQG 449
Query: 299 YNMAREFDMCVKFYNEFRMNG 319
+ +R+ + K + E G
Sbjct: 450 FCQSRKLIVAKKVFQEMVSQG 470
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 49/109 (44%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
++NG + AV++ + ++ +P +T +I+N C S+A + M
Sbjct: 165 TLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMAN 224
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G Y ++ K+G A+ L+ KM+ + +P+V Y ++D
Sbjct: 225 GCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIID 273
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 39/217 (17%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
M ++LC++ + E + M EKGI+ D +Y + + + +V LF +
Sbjct: 341 MLEVLCNA----EKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKM 396
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
+ G++ D+ + ++ Y G+V+K E+ E M+
Sbjct: 397 KTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVME------------------------ 432
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
+ C P VTY S+IN + G +A +F EMQ+KG+D V YS +
Sbjct: 433 -----------ASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSIL 481
Query: 242 VAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
+ +GK+ ++ A L +M +GC PN+ YN L+D
Sbjct: 482 IECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLD 518
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 3/199 (1%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
MY ++ +LGK + I F MK GI+ D Y +I S+ + V A ELF+
Sbjct: 372 MYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM 431
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAY 181
E D+ + L+ + G +++ + + M+ + +++ F K
Sbjct: 432 EASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKV 491
Query: 182 WAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSM 241
A +++++IS+GC P VTY +++ R G +A K++ M+Q+G + YS +
Sbjct: 492 EMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSIL 551
Query: 242 VAMYG---KTGRIRDAMRL 257
+ +T RIR R+
Sbjct: 552 ERLESRSQRTVRIRKPTRI 570
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYKILC 67
++KMK+ GI+ D Y ++ ++ ++G +K + LF +E S K D+ Y L
Sbjct: 393 FDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVV-----TYNSLI 447
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
+ LGK G E F++M+EKG D Y+ LI F +V++A LF E +G
Sbjct: 448 NCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCT 507
Query: 128 RDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
++ + L+ G E+ ++ E+MK L I D I+ I+ R
Sbjct: 508 PNIVTYNILLDCLERRGKTEEAHKLYETMKQQGL-IPDSITYSILERLESR 557
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 136 LVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQG 195
+V ++ V K +V E M+ + ++++ +K A +V+E + +
Sbjct: 134 IVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKH 193
Query: 196 CIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAM 255
C+P TY +I + G SK F EM KG ++A+++++ GK + +
Sbjct: 194 CVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVI 253
Query: 256 RLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYN 313
+++KM C+PN + Y+ +D+ L +L + D+C +F N
Sbjct: 254 FVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEV------------LDICSRFMN 299
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 108/280 (38%), Gaps = 22/280 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
Y +L D+L K+G + + F DMK+K + D Y LI F E
Sbjct: 166 YNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMV 225
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
KG + +L F ++ + MV+K + V+ M + + + ++ +
Sbjct: 226 SKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLH 285
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
++ E L + Y+ ++ + C+ G S+A VF M A+ SM+
Sbjct: 286 ---RLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSML 342
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMA 302
+ + +A+ L+ M KG +V +YN V SA
Sbjct: 343 EVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYN-------------------MVFSALGKL 383
Query: 303 REFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
++ +++ + NG + D IM+ + ++ +++
Sbjct: 384 KQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDK 423
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 126/294 (42%), Gaps = 52/294 (17%)
Query: 66 LCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKG 125
+C + G+ + + ++ FR MKE Y ++ ++K+A ++ E G
Sbjct: 91 ICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMG 150
Query: 126 MLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW-AA 184
+ + A LN V++ K AA
Sbjct: 151 IPPSV----------------------------ASLN-------VLIKALCKNSGTMDAA 175
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
++++ ++ ++GC P TY ++IN CR+G +A+++F EM+ K VV Y+S++
Sbjct: 176 LRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHG 235
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRA----------------KNLRQ 288
++ + A+RL+ +M KG +PNV+ Y+SLMD H ++ ++L
Sbjct: 236 LCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPN 295
Query: 289 LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
+ Y+T++ + V+ + ++ G D + G ++ F + + E
Sbjct: 296 MITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHE 349
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 35 IGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGK-SGRAFEILKFFRDMKEKGILE 93
+G+++ AL R++ + PS + +L +L K SG L+ FR+M +G
Sbjct: 131 VGENQLKLALRFYRYMREMGIPPSVASL-NVLIKALCKNSGTMDAALRIFREMPNRGCPP 189
Query: 94 DPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVV 153
D Y +LI + ++ A+ELFKE E K + + L
Sbjct: 190 DSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSL----------------- 232
Query: 154 ESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
++G + + +A+++ E++ S+G P TY+S+++ +C+
Sbjct: 233 ------------------IHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKS 274
Query: 214 GLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIY 273
G S+A ++ M + ++ YS++V K G++++A+ ++ +MK +G P+ +Y
Sbjct: 275 GCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLY 334
Query: 274 NSLM 277
++
Sbjct: 335 GKII 338
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 122/279 (43%), Gaps = 9/279 (3%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYK 64
+ L + +M + G DS Y ++ ++G + LF E E++ T + Y
Sbjct: 174 AALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVT---YT 230
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
L L +S ++ +M KGI + Y+SL+ A EL +
Sbjct: 231 SLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSR 290
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
L ++ + LV +EG +++ +E+++ MK L + I++GF + A
Sbjct: 291 RHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEA 350
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRI--GL----YSKAEKVFIEMQQKGFDKCVVAY 238
++++ G P ++T++ + + + GL ++A ++++ M+ +G +
Sbjct: 351 ANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTF 410
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
S+V + G + A LV +M GC P+ +N+++
Sbjct: 411 DSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVV 449
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 20/234 (8%)
Query: 5 SKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHM-- 62
S + E+M S GI + Y +M+ K G S + L LD+ S H+
Sbjct: 244 SAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALEL--------LDMMVSRRHLPN 295
Query: 63 ---YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFK 119
Y L L K G+ E ++ MK +G+ D +Y +I F I + A
Sbjct: 296 MITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLD 355
Query: 120 EAEEKGMLRDLEVFLKLVLMY--IEEGMV----EKTLEVVESMKNAELNISDCISCVIVN 173
E G+ + + V ++ + +G+ + ++ SM+ ++I +VN
Sbjct: 356 EMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVN 415
Query: 174 GFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYC-RIGLYSKAEKVFIEM 226
F + A + ++++ GCIP +VT+ +++ A+ R + AE V +E+
Sbjct: 416 YFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQVEL 469
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 151 EVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAY 210
E++ MK + NI++ I I + + AV+V+ ++ C P Q +Y ++
Sbjct: 71 ELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAIL 130
Query: 211 CRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV-AMYGKTGRIRDAMRLVAKMKPKGCEPN 269
A + + M++ G V + + ++ A+ +G + A+R+ +M +GC P+
Sbjct: 131 VGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPD 190
Query: 270 VWIYNSLMD------MHGRAKNL-RQLE---------KYTTVISAYNMAREFDMCVKFYN 313
+ Y +L++ G AK L +++E YT++I +++ D ++
Sbjct: 191 SYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLE 250
Query: 314 EFRMNG 319
E G
Sbjct: 251 EMASKG 256
>gi|147778635|emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]
Length = 466
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 141/308 (45%), Gaps = 3/308 (0%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M++ G L G Y ++EA +G + + A+F E L L +Y ++ S
Sbjct: 67 QMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKL---DLRVYNVMLRSCL 123
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G K +M GI + + Y +L+ + + + E G D
Sbjct: 124 RKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGPDSF 183
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
V+ K++ +Y + GM +K +E+V ++ +++ I I++ F K A++V+E++
Sbjct: 184 VYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKM 243
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+G P +T+ S+I +C+ G KA ++F +MQ++G + ++++ G+ G+
Sbjct: 244 QEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQGKW 303
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
R MK +G + + IY L+D++G+ + E+ + + + + M
Sbjct: 304 DVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVL 363
Query: 312 YNEFRMNG 319
N + G
Sbjct: 364 ANAYAQQG 371
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 14/269 (5%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M G DS Y +++ + G +K + E + L +Y + D+ G
Sbjct: 172 EMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSL---DKRIYNSIIDTFG 228
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K G E L+ F M+E+G+ D + SLI +V A ELF + +E+G+ D +
Sbjct: 229 KCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPK 288
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+F+ ++ E+G + E+MK S I ++V+ + + + + L
Sbjct: 289 IFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISAL 348
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
S+G P + + NAY + GL + KV M+ +G + ++ + ++ +G GR
Sbjct: 349 KSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRH 408
Query: 252 RDAM-----------RLVAKMKPKGCEPN 269
+A+ + +M+ GC P+
Sbjct: 409 LEALSVYHHIKDTVPEIYEEMESAGCTPD 437
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 140/313 (44%), Gaps = 11/313 (3%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+M + GI + Y +++ + + G V A+ E SR D + +Y +
Sbjct: 137 EMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEM-SR--DGFGPDSFVYSKVIGVYR 193
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+G + ++ R+++E G+ D +Y S+I +F E+ A E+F++ +E+G+ D+
Sbjct: 194 DNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIM 253
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ L+ + + G V K LE+ M+ L I I++ ++ + + +E +
Sbjct: 254 TWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENM 313
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
+G YA +++ Y + G + E+ ++ +G + + Y + G
Sbjct: 314 KCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVLANAYAQQGLC 373
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKF 311
++++ M+ +G EPN+ + N L++ G A R LE +S Y+ + D +
Sbjct: 374 EQTVKVLQLMETEGIEPNLIMLNMLINAFGIAG--RHLE----ALSVYHHIK--DTVPEI 425
Query: 312 YNEFRMNGGVIDR 324
Y E G DR
Sbjct: 426 YEEMESAGCTPDR 438
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
L +EKM+ G+ D + +++ K GD K LF + + L P ++ +
Sbjct: 237 LEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPK---IFITI 293
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
LG+ G+ I + F +MK +G ++YA L+ + + EE + +G+
Sbjct: 294 ISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGI 353
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+F L Y ++G+ E+T++V++ M+ + + + +++N F + A+
Sbjct: 354 QPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALS 413
Query: 187 V-----------YEQLISQGCIP 198
V YE++ S GC P
Sbjct: 414 VYHHIKDTVPEIYEEMESAGCTP 436
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
+ G + +K M+ G Y ++I + S+ AE +F+E G+ DL
Sbjct: 54 RVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLR 113
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
V+ ++ + +G++E +V+ M D + G + RA
Sbjct: 114 VYNVMLRSCLRKGLLELADKVLAEM--------DAL------GIGRNRA----------- 148
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
TY ++++ Y R G + V EM + GF YS ++ +Y G
Sbjct: 149 ----------TYEALVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMW 198
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
+ AM +V +++ G + IYNS++D G+ L +
Sbjct: 199 KKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSE 235
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 16/175 (9%)
Query: 184 AVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVA 243
A+K+ Q+ + G +Y ++I A +G +AE +F EM G + Y+ M+
Sbjct: 61 AMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLRVYNVMLR 120
Query: 244 MYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEK------------ 291
+ G + A +++A+M G N Y +L+D +GRA L +
Sbjct: 121 SCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGP 180
Query: 292 ----YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y+ VI Y + ++ E R G +D+ + ++ F K ++ E
Sbjct: 181 DSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSE 235
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 201 VTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAK 260
V Y + I CR+G KA K+ +M+ GF + +Y++++ G GR +A + +
Sbjct: 43 VVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFRE 102
Query: 261 MKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMARE---FDMCVKFYN 313
M G + ++ +YN ++ R L +K + A + R ++ V +Y
Sbjct: 103 MVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYG 158
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 112/229 (48%), Gaps = 1/229 (0%)
Query: 50 SRKLDLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIA 109
S+ L++ P++ + ++ ++ + G + ++ FR++ + D Y++L+
Sbjct: 161 SKSLNIHPNAL-TFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEE 219
Query: 110 EVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISC 169
+ A L E + +G +L F L+ ++G + + ++V++M ++
Sbjct: 220 RIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYN 279
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
+V+G + AV + Q++S C+P VT+ ++IN + G S +V + ++ +
Sbjct: 280 ALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEAR 339
Query: 230 GFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
G YSS+++ K G+ AM L +M KGC PN +Y++L+D
Sbjct: 340 GHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALID 388
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 125/264 (47%), Gaps = 3/264 (1%)
Query: 14 KSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLGKS 73
KS I ++ + +++A ++G +K +F E R + P + + Y L L K
Sbjct: 162 KSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLR--NCAPDN-YTYSTLMHGLCKE 218
Query: 74 GRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVF 133
R E + +M+ +G + + LI + ++ A +L KG + + +
Sbjct: 219 ERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTY 278
Query: 134 LKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLIS 193
LV +G +EK + ++ M + + +D ++NGF + +V L +
Sbjct: 279 NALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEA 338
Query: 194 QGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRD 253
+G + Y+S+I+ C+ G +++A +++ EM KG + YS+++ + G++ +
Sbjct: 339 RGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDE 398
Query: 254 AMRLVAKMKPKGCEPNVWIYNSLM 277
A +++MK KG PN + Y+SLM
Sbjct: 399 ARGFLSEMKNKGYLPNSFTYSSLM 422
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 119/261 (45%), Gaps = 5/261 (1%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
+M S V + + ++ F G + + + E+R + ++Y L L
Sbjct: 299 NQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARG---HRGNEYVYSSLISGL 355
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDL 130
K G+ + ++ +++M KG + VY++LI ++ A E + KG L +
Sbjct: 356 CKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNS 415
Query: 131 EVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQ 190
+ L+ Y E G K + V + M N ++ +++NG K + A+ V++Q
Sbjct: 416 FTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQ 475
Query: 191 LISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG--FDKCVVAYSSMVAMYGKT 248
++S+G V Y+S+I+ +C L + K+F +M +G V+ Y+ ++ +
Sbjct: 476 MLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQ 535
Query: 249 GRIRDAMRLVAKMKPKGCEPN 269
I A+ ++ M +GC+P+
Sbjct: 536 KSIFRAIDILNIMLDQGCDPD 556
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 125/292 (42%), Gaps = 22/292 (7%)
Query: 63 YKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
+ +L +L K G K +M KG + + Y +L+ +++ A L +
Sbjct: 243 FNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMV 302
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
+ + F L+ ++ +G V+ S++ ++ + +++G K +
Sbjct: 303 SNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFN 362
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A++++++++ +GC P + Y+++I+ CR G +A EM+ KG+ YSS++
Sbjct: 363 QAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLM 422
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE------------ 290
Y + G A+ + +M C N Y+ L++ G K+ + +E
Sbjct: 423 RGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILIN--GLCKDGKFMEALMVWKQMLSRG 480
Query: 291 ------KYTTVISAYNMAREFDMCVKFYNEFRMNGGVI--DRAMAGIMVGVF 334
Y+++I + A + +K +N+ G V+ D I++ F
Sbjct: 481 IKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAF 532
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ +MK+ G + +S Y +M +++ GDS K ++ E + + Y IL +
Sbjct: 402 FLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNN---CIHNEVCYSILIN 458
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLR 128
L K G+ E L ++ M +GI D Y+S+I F + V+ +LF + +G +
Sbjct: 459 GLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVV 518
Query: 129 DLEVFLKLVLM--YIEEGMVEKTLEVVESMKNAELNISDCISCVI--------------- 171
+V +L+ + + + + ++++ M + + D I+C I
Sbjct: 519 QPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCD-PDFITCDIFLKTLRENMNPPQDG 577
Query: 172 -------VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCR 212
V KR+ A K+ E ++ + +P T+A ++ C+
Sbjct: 578 REFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCK 625
>gi|356526577|ref|XP_003531893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 878
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 132/284 (46%), Gaps = 6/284 (2%)
Query: 9 YYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCD 68
+ E+M +AG + D Y +++ G + L E E + + + Y D
Sbjct: 283 FLEEMIAAGCMPDRLTYNSLLKTCVAKGRWKLCRDLLAEMEWKGIG---RDVYTYNTYVD 339
Query: 69 SLGKSGRAFEILKFFRD--MKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+L K GR ++ + D M K I + Y++L+ ++ + A ++ E + +
Sbjct: 340 ALCKGGR-MDLARHAIDVEMPAKNIWPNVVTYSTLMAGYSKAERFEDALNIYDEMKHLLI 398
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + LV +Y G E+ + + M+ + ++ G+ + Y K
Sbjct: 399 RLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVTYNALIEGYGRHNKYVEVQK 458
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+++++ ++ P +TY+++I Y + +Y++A V+ E++Q+G VV YS+++
Sbjct: 459 LFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFYSALIDALC 518
Query: 247 KTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
K G I ++RL+ M KG PNV YNS++D + L LE
Sbjct: 519 KNGLIESSLRLLDVMTEKGSRPNVVTYNSIIDAFKIGQQLPALE 562
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 109/246 (44%), Gaps = 21/246 (8%)
Query: 99 ASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKN 158
+++I + + ++++A +LF+E+ +G + F ++ + + ++ SM
Sbjct: 194 SNMIRTLGRLKKIELALDLFEESRTRGYGNTVYSFSAMISALGRNNRFSEAVSLLRSMGK 253
Query: 159 AELNISDCISCVIVNGFSKRR-AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYS 217
L + I++ +K + VK E++I+ GC+P ++TY S++ G +
Sbjct: 254 FGLEPNLVTYNAIIDAGAKGELTFEIVVKFLEEMIAAGCMPDRLTYNSLLKTCVAKGRWK 313
Query: 218 KAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLV-AKMKPKGCEPNVWIYNSL 276
+ EM+ KG + V Y++ V K GR+ A + +M K PNV Y++L
Sbjct: 314 LCRDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNIWPNVVTYSTL 373
Query: 277 MDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
M + Y+ A F+ + Y+E + +DR +VG+++
Sbjct: 374 M-------------------AGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYAN 414
Query: 337 LSQIEE 342
L EE
Sbjct: 415 LGWFEE 420
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 119/307 (38%), Gaps = 52/307 (16%)
Query: 52 KLDLTPSSTHMYKILCDSLGKSGRAFEIL-KFFRDMKEKGILEDPSVYASLICSFASIAE 110
K L P+ Y + D+ K FEI+ KF +M G + D Y SL+ + +
Sbjct: 253 KFGLEPNLV-TYNAIIDAGAKGELTFEIVVKFLEEMIAAGCMPDRLTYNSLLKTCVAKGR 311
Query: 111 VKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCV 170
K+ +L E E KG+ RD+ + V + G ++ ++
Sbjct: 312 WKLCRDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDV--------------- 356
Query: 171 IVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKG 230
++ ++ P VTY++++ Y + + A ++ EM+
Sbjct: 357 -------------------EMPAKNIWPNVVTYSTLMAGYSKAERFEDALNIYDEMKHLL 397
Query: 231 FDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLE 290
V+Y+++V +Y G +A+ +M+ G + +V YN+L++ +GR +++
Sbjct: 398 IRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVTYNALIEGYGRHNKYVEVQ 457
Query: 291 K----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVF 334
K Y+T+I Y R + + Y E + G D ++
Sbjct: 458 KLFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFYSALIDAL 517
Query: 335 SKLSQIE 341
K IE
Sbjct: 518 CKNGLIE 524
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 35/190 (18%)
Query: 151 EVVESMKNAELNISDCISCVI-------------VNGFSKRRAYWAAVKVYEQLISQGC- 196
EV+ S+ NA ++S S ++ + F+ A + Y+ +S+
Sbjct: 126 EVLHSLTNAGNDVSAIDSVLLHYRLYVAEDYVYLLKEFANTGDLLLATRTYDFAMSRATD 185
Query: 197 --IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDA 254
G++T +++I R+ A +F E + +G+ V ++S+M++ G+ R +A
Sbjct: 186 NTFMGKLT-SNMIRTLGRLKKIELALDLFEESRTRGYGNTVYSFSAMISALGRNNRFSEA 244
Query: 255 MRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTTVISAYNMAREFDMCVKFYNE 314
+ L+ M G EPN+ YN+++D + + F++ VKF E
Sbjct: 245 VSLLRSMGKFGLEPNLVTYNAIIDAGAKGE------------------LTFEIVVKFLEE 286
Query: 315 FRMNGGVIDR 324
G + DR
Sbjct: 287 MIAAGCMPDR 296
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 107/218 (49%), Gaps = 1/218 (0%)
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
+Y L K+G+ E M E G DP Y +I S V A+EL +A
Sbjct: 262 VYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQA 321
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM-KNAELNISDCISCVIVNGFSKRRA 180
E+ + + V LV + VE+ ++E M + + S +++G K
Sbjct: 322 MERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADR 381
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
A V +++ GC+P VTY +II+A+C++G +A ++F M ++G VVAY+
Sbjct: 382 LDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNI 441
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
++ Y + ++ +A+ ++ +M +G +PNV ++++D
Sbjct: 442 LIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVD 479
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 3/215 (1%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E + F+D D Y +LI F ++ A L E + G+ + F L+
Sbjct: 35 EAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLI 94
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
E +K L++ M + ++ + V++ K A +E+++ GC+
Sbjct: 95 RKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCL 154
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P +VTY ++++ + + + ++F EM KG +V Y+++V Y K GRI A+ L
Sbjct: 155 PDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSL 214
Query: 258 VAKMKPKGCEPNVWIYNSLMD---MHGRAKNLRQL 289
+ ++K G P+ +Y++L+D H R R+L
Sbjct: 215 MRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEAREL 249
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 147/348 (42%), Gaps = 22/348 (6%)
Query: 12 KMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSLG 71
+MK+AGI + ++ ++ ++K +F + K+ +Y ++ L
Sbjct: 77 EMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVK---PDAFLYTVVIGHLC 133
Query: 72 KSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLE 131
K + +F M + G L D Y L+ S + + ++F+E KG +L
Sbjct: 134 KINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 193
Query: 132 VFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQL 191
+ +V Y + G +++ L ++ +K + S + +++G K + A +++E
Sbjct: 194 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE-- 251
Query: 192 ISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRI 251
++ G + + Y S I+ C+ G +A+ V ++M + G V+Y+ ++ K R+
Sbjct: 252 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 311
Query: 252 RDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNL--------RQLE---------KYTT 294
+A L+ + + C P V + L+D +++ + R LE Y+
Sbjct: 312 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSA 371
Query: 295 VISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
VI A D + R G V D ++ F K+ +++E
Sbjct: 372 VIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDE 419
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 12/283 (4%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLT---PSSTHMYKIL 66
+E+M S G + Y ++ + K G ++ +L R+L T PS + +Y L
Sbjct: 180 FEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLM-----RRLKGTGRSPSGS-LYSTL 233
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
D L K R E + F G ++D VY S I ++ A+ + + E G
Sbjct: 234 IDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGC 291
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
D + ++ ++ V + E+++ + + V+V+G K R A
Sbjct: 292 APDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACV 351
Query: 187 VYEQLISQGC-IPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMY 245
+ E+++ G P VTY+++I+ C+ A V +M++ G VV Y++++ +
Sbjct: 352 ILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAF 411
Query: 246 GKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ 288
K GR+ +A L +M +GC +V YN L+ + RA + +
Sbjct: 412 CKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDE 454
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 54 DLTPSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKV 113
D PS Y + D L K+ R + + M+ G + D Y ++I +F + +
Sbjct: 361 DRAPSVV-TYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDE 419
Query: 114 AEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVN 173
A ELF+ E+G D+ + L+ Y V++ + ++E M + + IV+
Sbjct: 420 ARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVD 479
Query: 174 GFSK 177
G K
Sbjct: 480 GLCK 483
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 117/275 (42%), Gaps = 45/275 (16%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKI---LC 67
+KM G V D Y +M+ K E+ LF E E +L TP+ I LC
Sbjct: 417 KKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEME--RLGCTPNRRSHNTIILGLC 474
Query: 68 -----DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE 122
D + G+ E + + M + G + D Y++LI SIA V A L
Sbjct: 475 QQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL---- 530
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
E MV++ + +N +++G K
Sbjct: 531 --------------------EDMVKRQCKPTVVTQN-----------TLIHGLCKAGRIK 559
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A +V + ++S G P VTY ++++ +CR G +A ++ +M +G VV Y+++V
Sbjct: 560 EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 619
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLM 277
+ K R+ +A + A+MK GC PN++ Y +L+
Sbjct: 620 SGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 654
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 142/355 (40%), Gaps = 30/355 (8%)
Query: 8 HYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILC 67
+ ++K+ +G+ + Y ++ + LF + R P S Y ++
Sbjct: 344 NLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG---CPPSPVTYNVMI 400
Query: 68 DSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGML 127
D+ K G E + M E G + D Y +++ + V+ A LF E E G
Sbjct: 401 DASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCT 460
Query: 128 RDLEVFLKLVLMYIEE---------GMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSK 177
+ ++L ++ G +++ +++ M + + ++ D ++ +++G
Sbjct: 461 PNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTD-DGHVPDVVTYSTLISGLCS 519
Query: 178 RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA 237
A + E ++ + C P VT ++I+ C+ G +A +V M G VV
Sbjct: 520 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 579
Query: 238 YSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQ--------- 288
Y+++V + + G+ A L++ M +G PNV Y +L+ +A L +
Sbjct: 580 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 639
Query: 289 -------LEKYTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSK 336
L YT +I + A + D +K + E G D + G + K
Sbjct: 640 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCK 694
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 129/308 (41%), Gaps = 18/308 (5%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKL---DLTPSSTHMY 63
+ +EKM + DS Y +++ K G LF +KL +TPS T Y
Sbjct: 308 VQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLF-----QKLLHSGVTPS-TVAY 361
Query: 64 KILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEE 123
L L + + + F DM +G P Y +I + ++ A +L K+ E
Sbjct: 362 TSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIE 421
Query: 124 KGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSK------ 177
G + D+ + ++ + VE+ L + M+ + I+ G +
Sbjct: 422 DGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQ 481
Query: 178 ---RRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKC 234
R A ++ +++ G +P VTY+++I+ C I A + +M ++
Sbjct: 482 ACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPT 541
Query: 235 VVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKNLRQLEKYTT 294
VV ++++ K GRI++A ++ M G P+V YN+L+ H RA + + +
Sbjct: 542 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 601
Query: 295 VISAYNMA 302
+ A +A
Sbjct: 602 DMVARGLA 609
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 9/216 (4%)
Query: 69 SLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAE------ 122
S G+ +A E+L R M ++ D Y +++ V+ A LF + E
Sbjct: 224 SRGQVDKARELL---RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSS 280
Query: 123 EKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYW 182
L + ++L + +++ +++ E M ++ ++++G +K
Sbjct: 281 SSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLN 340
Query: 183 AAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMV 242
A ++++L+ G P V Y S+I+ C + A ++F +M ++G V Y+ M+
Sbjct: 341 DARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMI 400
Query: 243 AMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K G + +A L+ KM G P+V YN++MD
Sbjct: 401 DASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 436
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 38/260 (14%)
Query: 21 DSGCYCQIMEAFYKIGDSEKVAALFLECE---SRKLDLTPSSTHMYKILCDSLGKSGRAF 77
D YC +++ K G E+ LF + E S +P S Y I+ L ++ R
Sbjct: 246 DEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRID 305
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E ++ F M E+ + D Y LI A ++ A LF++
Sbjct: 306 EAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQK----------------- 348
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
+ G+ T+ +++G ++ A +++ + +GC
Sbjct: 349 --LLHSGVTPSTVAYTS----------------LIHGLCMANSFDDARELFADMNRRGCP 390
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRL 257
P VTY +I+A C+ G+ +A + +M + G VV Y++++ K+ R+ +A+ L
Sbjct: 391 PSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLL 450
Query: 258 VAKMKPKGCEPNVWIYNSLM 277
+M+ GC PN +N+++
Sbjct: 451 FNEMERLGCTPNRRSHNTII 470
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/373 (19%), Positives = 148/373 (39%), Gaps = 45/373 (12%)
Query: 2 NSQSKLHYYEKMKS-AGIVLDSGCY------CQIMEAFYKIGDSEKVAALFLECESRKLD 54
+S SK E +K +++D GC+ I+ K G ++ + E SR +
Sbjct: 52 DSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMI- 110
Query: 55 LTP---SSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEV 111
P +S+ + LC G RAF++L+ + + S Y ++ + A V
Sbjct: 111 -PPYFATSSFLAHELCLR-GSMERAFQLLEIMP-------VANSSAYNIVVVALCKAARV 161
Query: 112 KVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVI 171
A EL + EK + +++ ++ G +++ L+V + ++ V+
Sbjct: 162 DDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVT---LNVL 218
Query: 172 VNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQ---- 227
+ GF R A ++ + + C P +V+Y ++++ C+ G +A ++F + +
Sbjct: 219 LEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSS 278
Query: 228 --QKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHGRAKN 285
+ Y+ ++ + RI +A+++ KM + P+ W Y L+D +A
Sbjct: 279 SSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGK 338
Query: 286 LRQLEK----------------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGI 329
L YT++I MA FD + + + G +
Sbjct: 339 LNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNV 398
Query: 330 MVGVFSKLSQIEE 342
M+ K +EE
Sbjct: 399 MIDASCKRGMLEE 411
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 170 VIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQK 229
V+++ SKR+ A K+ + ++ +GC P T+ +I+ C+ G +AE V EM+ +
Sbjct: 49 VLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSR 108
>gi|255660954|gb|ACU25646.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 375
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S + I+ L +G+ E++ + MKE G +ED Y L+ F + + +
Sbjct: 58 SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVL 117
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ AE+KG + D + ++ +E +++ L V+ M + + + ++NG
Sbjct: 118 EMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGA 177
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A++V+ ++ + C P +TY ++IN C+ ++ +A + E+ KG D V+ Y
Sbjct: 178 SKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLDPGVITY 237
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
S ++ ++ A++L ++ KG +P+V ++N L +HG
Sbjct: 238 SMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNIL--IHG 278
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 123/268 (45%), Gaps = 19/268 (7%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ ++++ E + D VY +++ + +A++K EL++ +G R + F ++
Sbjct: 11 RVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSSFNIMMRGL 69
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G V++ + + E MK + + D I+ ++V+GF K ++ V E +G +
Sbjct: 70 FDNGKVDEVISIWELMKESGF-VEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLD 128
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
Y+++IN C+ +A V M + G V Y++++ + DA+R+
Sbjct: 129 AFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFR 188
Query: 260 KMKPKGCEPNVWIYNSLMD------MHGRAKNLRQ--LEK--------YTTVISAYNMAR 303
+M C P + YN+L++ M G A NL + L+K Y+ ++ +
Sbjct: 189 EMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDH 248
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
+ + ++ +N+ G D M I++
Sbjct: 249 KVERALQLWNQVTSKGFKPDVQMHNILI 276
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ AE ++KE E + D V+ ++ Y ++ E+ E M +E N S
Sbjct: 4 GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWE-MMGSEGNRSVSSF 62
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ G + ++E + G + +TY +++ +C+ G K+ V +Q
Sbjct: 63 NIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KG AYS+M+ K + A+ ++ M GC+PNV +YN+L++
Sbjct: 123 KGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLIN 172
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 102/249 (40%), Gaps = 3/249 (1%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKIL 66
LH E + G VLD+ Y ++ K + ++ AL++ K P+ H+Y L
Sbjct: 114 LHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDR--ALYVLNGMIKSGCKPN-VHVYNTL 170
Query: 67 CDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGM 126
+ L + + + ++ FR+M Y +LI A L KE +KG+
Sbjct: 171 INGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGL 230
Query: 127 LRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVK 186
+ + L+ + VE+ L++ + + + ++++G A+
Sbjct: 231 DPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALS 290
Query: 187 VYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYG 246
+Y + P V++ +++ + + G A ++ + + G + +++Y+ +
Sbjct: 291 LYFDMNRWKYAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLC 350
Query: 247 KTGRIRDAM 255
RI DA+
Sbjct: 351 SCNRISDAI 359
>gi|255660958|gb|ACU25648.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 348
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
Query: 59 STHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELF 118
S + I+ L +G+ E++ + MKE G +ED Y L+ F + + +
Sbjct: 58 SVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVL 117
Query: 119 KEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKR 178
+ AE+KG + D + ++ +E +++ L V+ M + + + ++NG
Sbjct: 118 EMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGA 177
Query: 179 RAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAY 238
+ A++V+ ++ + C P +TY ++IN C+ ++ +A + E+ KG D V+ Y
Sbjct: 178 SKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITY 237
Query: 239 SSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDMHG 281
S ++ ++ A++L ++ KG +P+V ++N L +HG
Sbjct: 238 SMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNIL--IHG 278
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 123/268 (45%), Gaps = 19/268 (7%)
Query: 81 KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLVLMY 140
+ ++++ E + D VY +++ + +A++K EL++ +G R + F ++
Sbjct: 11 RVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSSFNIMMRGL 69
Query: 141 IEEGMVEKTLEVVESMKNAELNISDCIS-CVIVNGFSKRRAYWAAVKVYEQLISQGCIPG 199
+ G V++ + + E MK + + D I+ ++V+GF K ++ V E +G +
Sbjct: 70 FDNGKVDEVISIWELMKESGF-VEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLD 128
Query: 200 QVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAMYGKTGRIRDAMRLVA 259
Y+++IN C+ +A V M + G V Y++++ + DA+R+
Sbjct: 129 AFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFR 188
Query: 260 KMKPKGCEPNVWIYNSLMD------MHGRAKNLRQ--LEK--------YTTVISAYNMAR 303
+M C P + YN+L++ M G A NL + L+K Y+ ++ +
Sbjct: 189 EMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDH 248
Query: 304 EFDMCVKFYNEFRMNGGVIDRAMAGIMV 331
+ + ++ +N+ G D M I++
Sbjct: 249 KVERALQLWNQVTSKGFKPDVQMHNILI 276
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 109 AEVKVAEELFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS 168
++ AE ++KE E + D V+ ++ Y ++ E+ E M +E N S
Sbjct: 4 GDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWE-MMGSEGNRSVSSF 62
Query: 169 CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQ 228
+++ G + ++E + G + +TY +++ +C+ G K+ V +Q
Sbjct: 63 NIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQ 122
Query: 229 KGFDKCVVAYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
KG AYS+M+ K + A+ ++ M GC+PNV +YN+L++
Sbjct: 123 KGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLIN 172
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 18/259 (6%)
Query: 78 EILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRDLEVFLKLV 137
E LK+F MK +GI+ D Y S+I + + V A EL+++ + D + +
Sbjct: 196 EALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIA 255
Query: 138 LMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAAVKVYEQLISQGCI 197
+Y G + +++V+ M+++ + + I ++ SK A KV+ ++ + G
Sbjct: 256 NVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVS 315
Query: 198 PGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVA-YSSMVAMYGKTGRIRDAMR 256
P VT + ++ Y R+G Y +A +V+ ++ +G+ KC VA Y+S++ + GR+ A
Sbjct: 316 PTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGW-KCDVAVYNSLMKACVEGGRVEQAED 374
Query: 257 LVAKMKPKGCEPNVWIYNSLMDMH---GRAKNLRQL-------------EKYTTVISAYN 300
++ +MK GC P+ Y + M+ + G R++ +T +I A
Sbjct: 375 ILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACK 434
Query: 301 MAREFDMCVKFYNEFRMNG 319
+A E + K ++E +G
Sbjct: 435 LAGEIEQASKIFDEMMESG 453
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 157/358 (43%), Gaps = 28/358 (7%)
Query: 2 NSQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
N ++ L ++K SA I+ I EK A F ++R +L + +
Sbjct: 95 NVEAALESWDKSLSAK---------NIVTVLNNINRWEKALAFFEWLKARP-ELYEINRY 144
Query: 62 MYKILCDSLGKSGRAFEIL-KFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y ++ L ++GR E+ K +M +GI D +++LI + + A + F+
Sbjct: 145 TYNVMLKIL-RNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFER 203
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRA 180
+ +G++ D + ++ MY G V + +E+ E +K+ + I N +++
Sbjct: 204 MKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGD 263
Query: 181 YWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSS 240
Y + +++ +++ G P V +++ + G ++A+KVF EM+ G V S
Sbjct: 264 YQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSI 323
Query: 241 MVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMDM---HGRAKN----LRQLEK-- 291
+V MY + G A + +K +G + +V +YNSLM GR + L+++++
Sbjct: 324 LVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAG 383
Query: 292 -------YTTVISAYNMAREFDMCVKFYNEFRMNGGVIDRAMAGIMVGVFSKLSQIEE 342
Y T ++ Y D + +++ G D + +M+ +IE+
Sbjct: 384 CNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQ 441
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 120/270 (44%), Gaps = 15/270 (5%)
Query: 3 SQSKLHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSST 60
+ L ++E+MKS GIV D Y +++ + ++G + L+ L+ + KLD T
Sbjct: 194 PEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLD-----T 248
Query: 61 HMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKE 120
Y + + ++G I++ ++M++ G + + +L+ + + +V A+++F E
Sbjct: 249 VTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNE 308
Query: 121 AEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNA----ELNISDCISCVIVNGFS 176
G+ LV MY G ++ EV E++K ++ + + + V G
Sbjct: 309 MRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGR 368
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
+A + +++ GC P +TY + +N Y G+ A ++F ++
Sbjct: 369 VEQAE----DILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTP 424
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGC 266
++ M+ G I A ++ +M GC
Sbjct: 425 LFTVMIRACKLAGEIEQASKIFDEMMESGC 454
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 128/274 (46%), Gaps = 7/274 (2%)
Query: 7 LHYYEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALF--LECESRKLDLTPSSTHMYK 64
L++++++ + G LD Y ++ K G+++ VA L LE S K D+ MY
Sbjct: 147 LYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVV-----MYN 201
Query: 65 ILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEK 124
+ +SL K+ + + +M KGI D Y +LI F + +K A L E + K
Sbjct: 202 TIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLK 261
Query: 125 GMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFSKRRAYWAA 184
+ ++ F L+ +EG +++ ++ M A + +++G+ A
Sbjct: 262 NINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHA 321
Query: 185 VKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVVAYSSMVAM 244
V+ + +G P Y ++IN C+ + +A +F EM+ K +V Y+S++
Sbjct: 322 KYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDG 381
Query: 245 YGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
K + A+ L +MK +G +P+V+ Y L+D
Sbjct: 382 LCKNHHLERAIALCKRMKEQGIQPDVYSYTILLD 415
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%)
Query: 57 PSSTHMYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEE 116
P T + + SL + ++ F+ + GI D + LI F A + +A
Sbjct: 54 PPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFS 113
Query: 117 LFKEAEEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCISCVIVNGFS 176
+F ++G + L+ G ++K L + + + ++NG
Sbjct: 114 VFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLC 173
Query: 177 KRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDKCVV 236
K A ++ +L P V Y +IIN+ C+ L A V+ EM KG VV
Sbjct: 174 KTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 233
Query: 237 AYSSMVAMYGKTGRIRDAMRLVAKMKPKGCEPNVWIYNSLMD 278
Y++++ + G +++A L+ +MK K PNV +N L+D
Sbjct: 234 TYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILID 275
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 17/234 (7%)
Query: 12 KMKSAGIVL----------DSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTH 61
KMK A I+L D Y +++ ++ + + + +F R +TP
Sbjct: 282 KMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQR--GVTPD-VQ 338
Query: 62 MYKILCDSLGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEA 121
Y + + L K+ E + F +MK K ++ D Y SLI ++ A L K
Sbjct: 339 CYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRM 398
Query: 122 EEKGMLRDLEVFLKLVLMYIEEGMVEKTLEVVESM--KNAELNISDCISCVIVNGFSKRR 179
+E+G+ D+ + L+ + G +E E+ + + K LN+ V++N K
Sbjct: 399 KEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVH--AYTVLINRLCKAG 456
Query: 180 AYWAAVKVYEQLISQGCIPGQVTYASIINAYCRIGLYSKAEKVFIEMQQKGFDK 233
+ A+ + ++ +GC+P VT+ II A KAEK+ EM +G K
Sbjct: 457 FFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLLK 510
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 108/257 (42%), Gaps = 40/257 (15%)
Query: 10 YEKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDS 69
Y +M GI D Y ++ F +G ++ +L E + + ++ + + IL D+
Sbjct: 220 YSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNIN---PNVCTFNILIDA 276
Query: 70 LGKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
L K G+ E M + I D Y SLI + + EVK A+ +F ++G+ D
Sbjct: 277 LSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPD 336
Query: 130 LEVFLKLVLMYIEEGMVEKTLEVVESMKNAELNISDCIS--------------------- 168
++ + ++ + MV++ + + E MK+ + I D ++
Sbjct: 337 VQCYTNMINGLCKTKMVDEAMSLFEEMKHKNM-IPDIVTYNSLIDGLCKNHHLERAIALC 395
Query: 169 ---------------CVIVNGFSKRRAYWAAVKVYEQLISQGCIPGQVTYASIINAYCRI 213
++++G K A +++++L+++G Y +IN C+
Sbjct: 396 KRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKA 455
Query: 214 GLYSKAEKVFIEMQQKG 230
G + +A + +M+ KG
Sbjct: 456 GFFDEALDLKSKMEDKG 472
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 11 EKMKSAGIVLDSGCYCQIMEAFYKIGDSEKVAALFLECESRKLDLTPSSTHMYKILCDSL 70
++MK GI D Y +++ K G E +F ++ L + H Y +L + L
Sbjct: 396 KRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHL---NVHAYTVLINRL 452
Query: 71 GKSGRAFEILKFFRDMKEKGILEDPSVYASLICSFASIAEVKVAEELFKEAEEKGMLRD 129
K+G E L M++KG + D + +I + E AE++ +E +G+L++
Sbjct: 453 CKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLLKE 511
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,750,134,379
Number of Sequences: 23463169
Number of extensions: 179588842
Number of successful extensions: 538606
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6216
Number of HSP's successfully gapped in prelim test: 4231
Number of HSP's that attempted gapping in prelim test: 438342
Number of HSP's gapped (non-prelim): 55332
length of query: 343
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 200
effective length of database: 9,003,962,200
effective search space: 1800792440000
effective search space used: 1800792440000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)