Query 044089
Match_columns 521
No_of_seqs 251 out of 1699
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 19:46:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044089.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044089hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.8 1.5E-18 5.1E-23 182.4 32.4 349 158-517 5-380 (445)
2 3gia_A Uncharacterized protein 99.8 1.6E-16 5.5E-21 166.9 28.0 346 159-516 4-369 (444)
3 4djk_A Probable glutamate/gamm 99.7 1.1E-13 3.7E-18 148.0 33.7 240 158-407 8-263 (511)
4 2jln_A MHP1; hydantoin, transp 98.8 5E-06 1.7E-10 88.2 30.5 288 160-456 24-333 (501)
5 3dh4_A Sodium/glucose cotransp 98.3 0.00055 1.9E-08 73.0 30.1 151 159-321 18-170 (530)
6 2xq2_A Sodium/glucose cotransp 97.8 0.0093 3.2E-07 64.4 28.4 148 160-320 48-198 (593)
7 2a65_A Leutaa, Na(+):neurotran 96.2 1.5 5.1E-05 46.1 30.4 228 163-392 9-289 (519)
8 4ain_A Glycine betaine transpo 84.4 42 0.0015 35.0 18.4 26 158-183 91-116 (539)
9 2wsw_A BCCT family betaine/car 53.8 2.1E+02 0.007 29.6 26.4 26 159-184 87-112 (509)
10 3gia_A Uncharacterized protein 25.0 4.8E+02 0.017 25.5 11.5 44 225-268 259-302 (444)
11 3l1l_A Arginine/agmatine antip 24.7 5E+02 0.017 25.3 18.6 47 223-269 259-305 (445)
12 3eml_A Human adenosine A2A rec 24.4 5E+02 0.017 25.3 11.6 26 377-402 54-79 (488)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.84 E-value=1.5e-18 Score=182.42 Aligned_cols=349 Identities=12% Similarity=0.124 Sum_probs=213.2
Q ss_pred CCCCCCchHHHHHHHHHhhhhhhhhHhHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHhHhhCCCCCChHHHHHHHhChh
Q 044089 158 PPARKCSLAQSCLNGINVLCGVGLLATPYAIKEGGWSSLSLLFIFGIIAFYTGILLQECLDSAPGLTTYPDVGQAAFGIT 237 (521)
Q Consensus 158 ~~~~~~s~~~~v~~li~~iiG~GILslP~a~~~~G~~g~illl~~~~l~~~t~~lL~~~~~~~~~~~sY~~i~~~~fG~~ 237 (521)
+.+|+.+.++.++..+++++|+|++.+|..+.++|..+++.+++.+++.......+.+...+.|....+.+..++.+||+
T Consensus 5 ~~~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~~~~~~li~~~~~~~~a~~~~el~~~~p~~Gg~y~~~~~~~G~~ 84 (445)
T 3l1l_A 5 ADAHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPF 84 (445)
T ss_dssp --CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTHHHHHHHHSCHH
T ss_pred CCCCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCchhhHHhHcCCh
Confidence 34678999999999999999999999999888888767777777777777777777777777777667888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCccccchhHHHHHHHHHHHhhhcccCcchhHHHHHHHHHH
Q 044089 238 GRLIVAIVLYLELFAASIEYLIMMSDNLASLFPHTSMNFGGLHLDCHKIFSITATLVVLPTVWLRDLTLLSYISVGGVIT 317 (521)
Q Consensus 238 ~~~l~~~~~~~~~~g~~v~y~i~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~~lii~pl~~l~~l~~l~~~s~~~~~~ 317 (521)
.+++..|..++........+....++++..+++....+ + ....+.++..+++..+ ..+..+...+++.+..+.
T Consensus 85 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~i-n~~g~~~~~~~~~~~~~~ 157 (445)
T 3l1l_A 85 LGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDP-----W-VLTITCVVVLWIFVLL-NIVGPKMITRVQAVATVL 157 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGGSH-----H-HHHHHHHHHHHHHHHH-HHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcccccc-----H-HHHHHHHHHHHHHHHH-HHhchHHHHHHHHHHHHH
Confidence 99999999888777777778888888887776643210 0 0111222222222222 223555566655554444
Q ss_pred HHHHHHhhhheeccc-cc-ccCCC---CcccCCCchhHHHHHHhhhcccccchhhhhhhccCCC-ChhhHHHHHHHHHHH
Q 044089 318 TGVVVLCLLWIGLVD-AV-GFHPY---GTALDLSNLPVTIGLYGFAYAGHSVFPNIYSSMQEPK-KFPFVLMISFVFCSL 391 (521)
Q Consensus 318 ~i~~~~~v~~~~~~~-~~-~~~~~---~~~~~~~~~~~a~~~~~faf~g~~~~~~i~~emk~p~-k~~~~~~~a~~i~~~ 391 (521)
.++.++.++..+... +. .+... ....++.++..++....|+|.|++.+..+.+|+|||+ +.||++..+..++++
T Consensus 158 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~a~~~~~~~~~~ 237 (445)
T 3l1l_A 158 ALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAV 237 (445)
T ss_dssp HHHHHHHHHHTTSTTCCCCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhChhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccHHHHHHHHHHHH
Confidence 443333333222211 11 11111 1112356788999999999999999999999999995 599999999999999
Q ss_pred HHHHHHHHHHhHccCCccchhccCCCchhH--------HHhHHHHHHHHhhhhh-----ccchhchHHHHHHhhcCCCcc
Q 044089 392 LNAGVGICGYLMFGDSIQSQFTLNFPKEFV--------ASKVAIWTTVLIPMSK-----YAMTLTPIALSLEELMPSKEL 458 (521)
Q Consensus 392 ~Y~~vg~~gy~~fG~~~~~~i~~n~p~~~~--------~~~i~~~~~~i~~~~s-----~pl~~~p~~~~le~~l~~~~~ 458 (521)
+|+++.+......+.+...+. ..|-... ...+..+...+..+.+ +...+.....+.++.+|+.-.
T Consensus 238 ~y~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~~~ 315 (445)
T 3l1l_A 238 CYVLSTTAIMGMIPNAALRVS--ASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFA 315 (445)
T ss_dssp HHHHHHHHHHHHSCTTTSCST--TCTHHHHHHHHHCTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTSSCGGGG
T ss_pred HHHHHHHHHHhcCCHHHHhcc--CcHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHH
Confidence 999999988887765432110 1111111 1111111112222222 222234445667788885411
Q ss_pred ccchhhhHHHHHHHHHH--HHHHhh--c----ccHHHHHHHHhHHHHHHHHHHHHHHHHHHHhCCCC
Q 044089 459 QSYSVSVIIRTILAIST--LVVALT--L----PYFGIVMSLIGSLLAMLITLIFPCVFYLKILQGKI 517 (521)
Q Consensus 459 ~~~~~~~~~~~~~~~~~--~~va~~--v----p~~~~vi~l~G~~~~~~i~~ilP~l~~l~~~~~~~ 517 (521)
+.+.++...+..++... .++.+. . ..+..+.++.+ ....+.|+++++.+++.+|++.
T Consensus 316 ~~~~~~~P~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~y~~~~~~~~~~r~~~~ 380 (445)
T 3l1l_A 316 RVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSV--IFTLVPYLYTCAALLLLGHGHF 380 (445)
T ss_dssp CCCTTCCCHHHHHHHHHHHHHHHHSTTSHHHHCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHSSSS
T ss_pred hcCCCCCCHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCc
Confidence 11122333333333222 122221 1 23566666655 3456788899998888877653
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=99.76 E-value=1.6e-16 Score=166.87 Aligned_cols=346 Identities=13% Similarity=0.089 Sum_probs=204.3
Q ss_pred CCCCCchHHHHHHHHHhhhhhhhhHhHHH-HHhhcHHHHHHHHHHHHHHHHHHHHHHHhHhhCCCCCChHHHHHHHhChh
Q 044089 159 PARKCSLAQSCLNGINVLCGVGLLATPYA-IKEGGWSSLSLLFIFGIIAFYTGILLQECLDSAPGLTTYPDVGQAAFGIT 237 (521)
Q Consensus 159 ~~~~~s~~~~v~~li~~iiG~GILslP~a-~~~~G~~g~illl~~~~l~~~t~~lL~~~~~~~~~~~sY~~i~~~~fG~~ 237 (521)
.+|+.+.++.++..++.++|+|++.+|.. ...+|...++.+++.+++.......+.+...+.|........+++.+|++
T Consensus 4 ~~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~~~~~~~li~~~~~~~~~~~~~el~~~~P~~Gg~y~~~~~~~G~~ 83 (444)
T 3gia_A 4 KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDN 83 (444)
T ss_dssp CCCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHCSS
T ss_pred cCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHhHHHHhCcc
Confidence 46789999999999999999999998865 55667656666777777777777777777766776666778889999996
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCccccchhHHHHHHHHHHHh--hhcccCcchhHHHHHHH
Q 044089 238 G-RLIVAIVLYLELFAASIEYLIMMSDNLASLFPHTSMNFGGLHLDCHKIFSITATLVVLP--TVWLRDLTLLSYISVGG 314 (521)
Q Consensus 238 ~-~~l~~~~~~~~~~g~~v~y~i~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~~lii~p--l~~l~~l~~l~~~s~~~ 314 (521)
+ ...+.+..++........+....++++..+++.... .....++..++++. ....+..+...+++.+.
T Consensus 84 ~~~g~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~ 154 (444)
T 3gia_A 84 IITGALSILLWMSYVISIALFAKGFAGYFLPLINAPIN---------TFNIAITEIGIVAFFTALNFFGSKAVGRAEFFI 154 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC---------HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc---------hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 2 223456666666666777888888888887754211 11111222222222 22223555555555544
Q ss_pred HHHHHHHHHhhhheeccc-c-cccCCCCcccCCCchhHHHHHHhhhcccccchhhhhhhccCCCC-hhhHHHHHHHHHHH
Q 044089 315 VITTGVVVLCLLWIGLVD-A-VGFHPYGTALDLSNLPVTIGLYGFAYAGHSVFPNIYSSMQEPKK-FPFVLMISFVFCSL 391 (521)
Q Consensus 315 ~~~~i~~~~~v~~~~~~~-~-~~~~~~~~~~~~~~~~~a~~~~~faf~g~~~~~~i~~emk~p~k-~~~~~~~a~~i~~~ 391 (521)
....++..+.++..+... + ..+.+...+.++.++..++....|+|.|++.+.++.+|+|||+| .||++..+..++++
T Consensus 155 ~~~~i~~~~~~ii~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~k~P~r~ip~ai~~~~~~~~~ 234 (444)
T 3gia_A 155 VLVKLLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMF 234 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHCCGGGTSCCCSHHHHHHHHHHHHHGGGGGTHHHHHHTTGGGBSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcChhhcCCCCCCcchHHHHHHHHHHHHHHHhHHHHHHHHHHccCcccchhHHHHHHHHHHHH
Confidence 444333332222222211 1 11222222334556788888999999999999999999999965 99999999999999
Q ss_pred HHHHHHHHHHhHccCCccch-----hccCCCc--hhHHHhHHHHHHHHhhhh-----hccchhchHHHHHHhhcCCCccc
Q 044089 392 LNAGVGICGYLMFGDSIQSQ-----FTLNFPK--EFVASKVAIWTTVLIPMS-----KYAMTLTPIALSLEELMPSKELQ 459 (521)
Q Consensus 392 ~Y~~vg~~gy~~fG~~~~~~-----i~~n~p~--~~~~~~i~~~~~~i~~~~-----s~pl~~~p~~~~le~~l~~~~~~ 459 (521)
+|++..+......+.+...+ +...... ......+..+...+..+. .+...+.....+.++.+|+.-.+
T Consensus 235 ~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~a~dg~lP~~f~~ 314 (444)
T 3gia_A 235 VYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFER 314 (444)
T ss_dssp HHHHHHHHHHTTSCHHHHHHTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHSSCCSSCCT
T ss_pred HHHHHHHHHHhCCCHHHHhcccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHhC
Confidence 99999888776655322110 0000000 000000111111111111 12333445666778888865111
Q ss_pred cchhhhHHHHHHH-HHHHHHHhhcccHHHHHHHHhHHHHHHHHHHHHHHHHHHHhCCC
Q 044089 460 SYSVSVIIRTILA-ISTLVVALTLPYFGIVMSLIGSLLAMLITLIFPCVFYLKILQGK 516 (521)
Q Consensus 460 ~~~~~~~~~~~~~-~~~~~va~~vp~~~~vi~l~G~~~~~~i~~ilP~l~~l~~~~~~ 516 (521)
.++ +...+..++ ....++...+.+++.+.++.+. ...+.|.++++.+++.+|++
T Consensus 315 ~~~-~~P~~a~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~r~~~ 369 (444)
T 3gia_A 315 KVW-FKSTEGLYITSALGVLFALLFNMEGVASITSA--VFMVIYLFVILSHYILIDEV 369 (444)
T ss_dssp TSC-CSCTHHHHHHHHHHHHHHHHSCHHHHHHHHHH--HHHHHHHHHHHHHHHTHHHH
T ss_pred CCC-CCCcHHHHHHHHHHHHHHHHcCHHHHHHHHHH--HHHHHHHHHHHHHHHhhhcC
Confidence 111 112222222 1112222223467887777554 45678888888888876654
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=99.66 E-value=1.1e-13 Score=147.96 Aligned_cols=240 Identities=14% Similarity=0.157 Sum_probs=140.2
Q ss_pred CCCCCCchHHHHHHHHHhhhhhhhhHhHHHHHhhcHHHHHHHHHHHHHHH-HHHHHHHHhHh--hCCCCCChHHHHHHHh
Q 044089 158 PPARKCSLAQSCLNGINVLCGVGLLATPYAIKEGGWSSLSLLFIFGIIAF-YTGILLQECLD--SAPGLTTYPDVGQAAF 234 (521)
Q Consensus 158 ~~~~~~s~~~~v~~li~~iiG~GILslP~a~~~~G~~g~illl~~~~l~~-~t~~lL~~~~~--~~~~~~sY~~i~~~~f 234 (521)
+.+|+.+.++.++..++.++| ++.+|. ...+|...++..++.+++.. .....+.+... +.| .......+++.+
T Consensus 8 ~~~r~l~~~~~~~l~~~~~ig--~~~~~~-~~~~G~~~~~~~~i~~~~~~l~~al~~ael~s~~~~P-~GG~y~~~~~~~ 83 (511)
T 4djk_A 8 GKAKQLTLLGFFAITASMVMA--VYEYPT-FATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWE-EGGVFAWVSNTL 83 (511)
T ss_dssp ----CCCHHHHHHHTGGGGCC--GGGHHH-HHTTTTHHHHHHHHHHHHTHHHHHHHHHHHHTTSCC----CHHHHHHHHH
T ss_pred ccCccccHHHHHHHHHHHHHh--hchhHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCC-CCChhhhHHhhc
Confidence 456789999999999999996 567775 46667654444444333332 24444555544 555 556667779999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhc--cccCCCCCCccccchhHHHHHHHHHHHhhhcccCcchhHHHHH
Q 044089 235 GITGRLIVAIVLYLELFAASIEYLIMMSDNLASLF--PHTSMNFGGLHLDCHKIFSITATLVVLPTVWLRDLTLLSYISV 312 (521)
Q Consensus 235 G~~~~~l~~~~~~~~~~g~~v~y~i~~~~~l~~l~--~~~~~~~~~~~~~~~~~~~i~~~lii~pl~~l~~l~~l~~~s~ 312 (521)
|++.+++..+..++........+....+..+..++ +....+ .+ ....+.++..+++..+ -.+..+...+++.
T Consensus 84 g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~----~~-~~~~~~~~~~~~~~~i-n~~g~~~~~~~~~ 157 (511)
T 4djk_A 84 GPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPALNED----PI-TKTIAALIILWALALT-QFGGTKYTARIAK 157 (511)
T ss_dssp CHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTTTCGGGTSC----SS-HHHHHHHHHHHHHHHH-HHTCSSSHHHHTH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC----cH-HHHHHHHHHHHHHHHH-HHhChHHHHHHHH
Confidence 99999999999888776666666666677666553 222110 00 0111222222222222 2235555555554
Q ss_pred HHHHH-HHHHHHhhhheec---cc-cc-c--cCCCC--cccCCCchhHHHHHHhhhcccccchhhhhhhccCCCC-hhhH
Q 044089 313 GGVIT-TGVVVLCLLWIGL---VD-AV-G--FHPYG--TALDLSNLPVTIGLYGFAYAGHSVFPNIYSSMQEPKK-FPFV 381 (521)
Q Consensus 313 ~~~~~-~i~~~~~v~~~~~---~~-~~-~--~~~~~--~~~~~~~~~~a~~~~~faf~g~~~~~~i~~emk~p~k-~~~~ 381 (521)
+..+. .+..++.++..+. .. +. . .+... +.....+...++....|+|.|++...++.+|+|||+| .||+
T Consensus 158 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~a 237 (511)
T 4djk_A 158 VGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLA 237 (511)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHTC------------CCCCCTTSTTTTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCcccchHHHHHHHHHHHHhhHHHHHHHHHhccCcccchhHH
Confidence 43322 1111111111111 11 10 0 11111 1111123445677889999999999999999999965 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHccCC
Q 044089 382 LMISFVFCSLLNAGVGICGYLMFGDS 407 (521)
Q Consensus 382 ~~~a~~i~~~~Y~~vg~~gy~~fG~~ 407 (521)
+..++.+++++|++..++.....+++
T Consensus 238 i~~~~~~~~~~y~~~~~~~~~~~~~~ 263 (511)
T 4djk_A 238 MLLLMVAAICLSSVGGLSIAMVIPGN 263 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHeecCHh
Confidence 99999999999999999888777654
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=98.79 E-value=5e-06 Score=88.18 Aligned_cols=288 Identities=13% Similarity=0.054 Sum_probs=159.4
Q ss_pred CCCCchHHHHHHHHHhhhhhhhhHhHHHHHh-hcHH-HHHHHHHHHHHHHHHHHHHHHhHhhCCCCCChHHHHHHHhChh
Q 044089 160 ARKCSLAQSCLNGINVLCGVGLLATPYAIKE-GGWS-SLSLLFIFGIIAFYTGILLQECLDSAPGLTTYPDVGQAAFGIT 237 (521)
Q Consensus 160 ~~~~s~~~~v~~li~~iiG~GILslP~a~~~-~G~~-g~illl~~~~l~~~t~~lL~~~~~~~~~~~sY~~i~~~~fG~~ 237 (521)
+|+.++++-+..-++..++.+-+.+...+.. .++. .++.+++..++......++...-.+ .| .+|..+.+..||++
T Consensus 24 ~R~~~~~~~~~~W~g~~~~i~~~~~Ga~~~~GLs~~~a~lai~lG~li~~~~~~l~~~~G~~-~G-l~~~v~~R~~FG~~ 101 (501)
T 2jln_A 24 ERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIR-WG-INFTVAARMPFGIR 101 (501)
T ss_dssp GCCBCHHHHHHHHHHHHCSTHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTHHHHH-HC-CCHHHHTTTTSCTT
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHhHHHhh-cC-CChhhhhHhhcchh
Confidence 4556888888777777777777766665543 2344 6666666666655555555554333 23 35999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCCCCCccccchhHHHHHHHHHHHhhhcccCcchhHHHHHHHHHH
Q 044089 238 GRLIVAIVLYLELFAASIEYLIMMSDNLASLFPHTSMNFGGLHLDCHKIFSITATLVVLPTVWLRDLTLLSYISVGGVIT 317 (521)
Q Consensus 238 ~~~l~~~~~~~~~~g~~v~y~i~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~~lii~pl~~l~~l~~l~~~s~~~~~~ 317 (521)
+..+..++..+.+.+-........++.+..++.... .. ....+..++..++.+++.+. ..+.++++..+....
T Consensus 102 Gs~i~~ll~~i~~igw~~v~~~~gg~al~~~~~~~~-g~-----~~~~v~~~i~~~l~~~~~~~-G~~~i~~~~~~~~p~ 174 (501)
T 2jln_A 102 GSLIPITLKALLSLFWFGFQTWLGALALDEITRLLT-GF-----TNLPLWIVIFGAIQVVTTFY-GITFIRWMNVFASPV 174 (501)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CC-----CCHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Cc-----chHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHH
Confidence 999999998888888888888888888877653221 00 01233444455556666544 677777777666555
Q ss_pred HHHHHHhhhheecc-ccc--c-cCCCCcccCCCchhHHHHH-HhhhcccccchhhhhhhccCCCC------------hhh
Q 044089 318 TGVVVLCLLWIGLV-DAV--G-FHPYGTALDLSNLPVTIGL-YGFAYAGHSVFPNIYSSMQEPKK------------FPF 380 (521)
Q Consensus 318 ~i~~~~~v~~~~~~-~~~--~-~~~~~~~~~~~~~~~a~~~-~~faf~g~~~~~~i~~emk~p~k------------~~~ 380 (521)
.++..+.+.+.... .+. + ....+.......+..++.. ..+.-....+.+...+.+|++++ ..+
T Consensus 175 ~~i~~i~~~~~~l~~~g~~~~~~~~~~~~~~~~~f~~ai~~~~~~~~~~~~~~~DysRy~~~~~~~~~~~~~~~~~~~~~ 254 (501)
T 2jln_A 175 LLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYAT 254 (501)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCCCSSCCSCHHHHHHHHHTTTHHHHTTTHHHHTTBCCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcchhhhccCCccchHHHHHHHHHHHHHHHHHHhccCcccccCCCCccccccchhhccchHHH
Confidence 44333322222111 111 0 0011111223345555544 23333444678889999998876 333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHccCCccchhccC-CCchhHHHhHHH-HHHHHhhhhhccc-hhchHHHHHHhhcCCC
Q 044089 381 VLMISFVFCSLLNAGVGICGYLMFGDSIQSQFTLN-FPKEFVASKVAI-WTTVLIPMSKYAM-TLTPIALSLEELMPSK 456 (521)
Q Consensus 381 ~~~~a~~i~~~~Y~~vg~~gy~~fG~~~~~~i~~n-~p~~~~~~~i~~-~~~~i~~~~s~pl-~~~p~~~~le~~l~~~ 456 (521)
...++..+..++..++|+......+......+... ++.......++. +..++..+++-.. ..++....+.+..++.
T Consensus 255 g~~lG~~i~~~~~~~lG~~~~~~~~~~dp~~~l~~~l~~~~~~~~~~~~~~~~la~i~tn~~~n~ys~~~~l~~~~~~~ 333 (501)
T 2jln_A 255 AQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTFPRV 333 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHTCCCHHHHHHHHHHHHHHHHTTHHHHHTHHHHHHHHHHSTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCccc
Confidence 44445555555555566543333332222222222 111111122333 3334444443333 5777888888887653
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=98.31 E-value=0.00055 Score=72.98 Aligned_cols=151 Identities=13% Similarity=0.057 Sum_probs=85.8
Q ss_pred CCCCCchHHHHHHHHHhhhhhh-hhHhHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHhHhhCCCCCChHHHHHHHhChh
Q 044089 159 PARKCSLAQSCLNGINVLCGVG-LLATPYAIKEGGWSSLSLLFIFGIIAFYTGILLQECLDSAPGLTTYPDVGQAAFGIT 237 (521)
Q Consensus 159 ~~~~~s~~~~v~~li~~iiG~G-ILslP~a~~~~G~~g~illl~~~~l~~~t~~lL~~~~~~~~~~~sY~~i~~~~fG~~ 237 (521)
..|+.+++...+.+..+.+++. ++++|......|+.+.......++.....+..+....+ +.+..|.+|+.++-||++
T Consensus 18 aGR~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~~~~~~~i~~~~~~p~~~-~~~~~T~~e~l~~Rfg~~ 96 (530)
T 3dh4_A 18 AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFI-EKGIYTIPEFVEKRFNKK 96 (530)
T ss_dssp CCSCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHHHHHHHHHHHHHTHHHHH-HTTCCSHHHHHHHHTCHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCccHHHHHHHHcCcH
Confidence 3677899999999988888876 77899887777765221111111111122222333333 346789999999999999
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHhHHhhhccccCCCCCCccccchhHHHHHHHHHHHhhhcccCcchhHHHHHHHHH
Q 044089 238 GRLIVAIVLYL-ELFAASIEYLIMMSDNLASLFPHTSMNFGGLHLDCHKIFSITATLVVLPTVWLRDLTLLSYISVGGVI 316 (521)
Q Consensus 238 ~~~l~~~~~~~-~~~g~~v~y~i~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~~lii~pl~~l~~l~~l~~~s~~~~~ 316 (521)
.+.+..++..+ ..+..+.+-+...+..++.+++ . + .....++.+++++..+.+-.++.+.+.-.+..+
T Consensus 97 ~~~~~a~~~l~~~~~~~~~~~l~~~~~~~~~~~G-i--~--------~~~~i~i~~~i~~~Yt~~GGl~aV~~TD~iQ~~ 165 (530)
T 3dh4_A 97 LKTILAVFWISLYIFVNLTSVLYLGGLALETILG-I--P--------LMYSILGLALFALVYSIYGGLSAVVWTDVIQVF 165 (530)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C--C--------HHHHHHHHHHHHHHTTC------CCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C--C--------HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 88877765433 2222233333334455555543 1 1 233444555555666777788888888877776
Q ss_pred HHHHH
Q 044089 317 TTGVV 321 (521)
Q Consensus 317 ~~i~~ 321 (521)
.+++.
T Consensus 166 im~~g 170 (530)
T 3dh4_A 166 FLVLG 170 (530)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=97.84 E-value=0.0093 Score=64.36 Aligned_cols=148 Identities=12% Similarity=0.048 Sum_probs=81.0
Q ss_pred CCCCchHHHHHHHHHhhhhhh-hhHhHHHHHhhcHH-HHHHHHHHHHHHHHHHHHHHHhHhhCCCCCChHHHHHHHhChh
Q 044089 160 ARKCSLAQSCLNGINVLCGVG-LLATPYAIKEGGWS-SLSLLFIFGIIAFYTGILLQECLDSAPGLTTYPDVGQAAFGIT 237 (521)
Q Consensus 160 ~~~~s~~~~v~~li~~iiG~G-ILslP~a~~~~G~~-g~illl~~~~l~~~t~~lL~~~~~~~~~~~sY~~i~~~~fG~~ 237 (521)
.|+.+++...+.+..+.+++. +++.|....+.|+. ....+. .++.....+..+..-.+ +.+..|.+|+.++-||++
T Consensus 48 GR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~~~~~~-~~~~~~~~~~~~~p~~~-r~~~~T~~e~l~~Rfg~~ 125 (593)
T 2xq2_A 48 GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWM-SAITLIIVGKYFLPIFI-EKGIYTIPEFVEKRFNKK 125 (593)
T ss_dssp ---CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGGHHHHH-HHHHHHHHHHTHHHHHH-HTTCCSHHHHHHHHTCHH
T ss_pred CCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHHHHHHH-HHHHHHHHHHHHHHHHH-hCCCCCcHHHHHHHccCc
Confidence 567889888888888877776 66888876666754 211111 11111111222223233 347799999999999999
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHhHHhhhccccCCCCCCccccchhHHHHHHHHHHHhhhcccCcchhHHHHHHHHH
Q 044089 238 GRLIVAIVLYL-ELFAASIEYLIMMSDNLASLFPHTSMNFGGLHLDCHKIFSITATLVVLPTVWLRDLTLLSYISVGGVI 316 (521)
Q Consensus 238 ~~~l~~~~~~~-~~~g~~v~y~i~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~~lii~pl~~l~~l~~l~~~s~~~~~ 316 (521)
.+.+..++..+ ..+.....-+...+..++.+++ . + .....++.+++++..+.+-.++.+.+.-.+..+
T Consensus 126 ~~~~~ai~~l~~~~~~~~~~~l~~~~~~l~~~~G-i--~--------~~~~i~i~~~i~~~Yt~~GGl~av~~TD~iQ~i 194 (593)
T 2xq2_A 126 LKTILAVFWISLYIFVNLTSVLYLGGLALETILG-I--P--------LMYSILGLALFALVYSIYGGLSAVVWTDVIQVF 194 (593)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-C--C--------HHHHHHHHHHHHHHHHHTTC---CCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-c--c--------HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 88777655432 2222233333344555565553 1 1 223334445555556666678888887777765
Q ss_pred HHHH
Q 044089 317 TTGV 320 (521)
Q Consensus 317 ~~i~ 320 (521)
.+++
T Consensus 195 iml~ 198 (593)
T 2xq2_A 195 FLVL 198 (593)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 7
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=96.24 E-value=1.5 Score=46.07 Aligned_cols=228 Identities=12% Similarity=0.082 Sum_probs=108.9
Q ss_pred CchHHHHHHHHHhhhhhh-hhHhHHHH-HhhcH---H-HHHHHHHHHHHHHHHHHHHHHhHhhCCCCCChHHHHHHHhCh
Q 044089 163 CSLAQSCLNGINVLCGVG-LLATPYAI-KEGGW---S-SLSLLFIFGIIAFYTGILLQECLDSAPGLTTYPDVGQAAFGI 236 (521)
Q Consensus 163 ~s~~~~v~~li~~iiG~G-ILslP~a~-~~~G~---~-g~illl~~~~l~~~t~~lL~~~~~~~~~~~sY~~i~~~~fG~ 236 (521)
.|-.+-++..++..+|-| +-=.||-. +++|- + =++.++++|+=..+.-..++|-..+..+ .+-...-++...+
T Consensus 9 ~sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGGgAFlipYli~l~~~GiPll~~E~alGq~~~~~~r-~~~i~a~~~l~~~ 87 (519)
T 2a65_A 9 ATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGH-GTTPAIFYLLWRN 87 (519)
T ss_dssp SCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTTC-CSHHHHHHHHSCS
T ss_pred CcHHHHHHHHHHHHhcccHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHhcccchhccC-CCHHHHHHHhcCC
Confidence 466788899999999999 88899975 56663 3 4455555555555666666663221221 1222222222221
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCC----CCCcc----------------c------------cc
Q 044089 237 -TGRLIVAIVLYLELFAASIEYLIMMSDNLASLFPHTSMN----FGGLH----------------L------------DC 283 (521)
Q Consensus 237 -~~~~l~~~~~~~~~~g~~v~y~i~~~~~l~~l~~~~~~~----~~~~~----------------~------------~~ 283 (521)
.++ .+.+..++..+..++-|.++.+-.+..++.....+ +.... + ..
T Consensus 88 ~~~~-giG~~~v~~~~~i~~yY~vi~gW~l~Y~~~s~~~~lp~~w~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~g~~~~ 166 (519)
T 2a65_A 88 RFAK-ILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPNATDPDSILRPFKEFLYSYIGVPKGDEPILKPSL 166 (519)
T ss_dssp HHHH-HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC--CCHHHHHHHHHHHHHHHHTCCSSSSCBCCCCH
T ss_pred cCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcccccCcHHHHHHHHHCCCCCcccccCccH
Confidence 122 23333333333344445554444443332211100 10000 0 00
Q ss_pred hhHHHHHHHHHHHhhhcccCc-chhHHHHHHHHHHHHHHHHhhhheecc---------cccccCCCCccc---CCCchhH
Q 044089 284 HKIFSITATLVVLPTVWLRDL-TLLSYISVGGVITTGVVVLCLLWIGLV---------DAVGFHPYGTAL---DLSNLPV 350 (521)
Q Consensus 284 ~~~~~i~~~lii~pl~~l~~l-~~l~~~s~~~~~~~i~~~~~v~~~~~~---------~~~~~~~~~~~~---~~~~~~~ 350 (521)
+.....+.+.++.-.+..|.+ +.+.+++.+.+....++++.++..+.. ++..+-..+... +..-+..
T Consensus 167 ~~~~~~~~~w~i~~~ii~~Gv~kgiek~~~~~mp~l~vlliiL~ir~ltLpGp~~~A~~Gl~~~~~Pd~s~L~~~~vw~~ 246 (519)
T 2a65_A 167 FAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIA 246 (519)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEHHHHHHHHHSCCTTSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHhcCCHHHhCCHHHHHH
Confidence 111112222223334555666 556666665555444444444333322 111111111111 1223567
Q ss_pred HHHHHhhhcc-cccchhhhhhhccCCCChhhHHHHHHHHHHHH
Q 044089 351 TIGLYGFAYA-GHSVFPNIYSSMQEPKKFPFVLMISFVFCSLL 392 (521)
Q Consensus 351 a~~~~~faf~-g~~~~~~i~~emk~p~k~~~~~~~a~~i~~~~ 392 (521)
|.+...|+++ |...+....+.+|+.++..+...+...+-+.+
T Consensus 247 A~gQ~FFSLslG~G~~ity~SY~~~~~n~~~~a~~v~~~n~~~ 289 (519)
T 2a65_A 247 AVGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKA 289 (519)
T ss_dssp HHHHHHHHHTTTSSHHHHHHTTSCTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHhHHhhhhcccCCCcChHhhHHHHHHHHHHH
Confidence 9999999995 56667777777777777665444433333333
No 8
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=84.39 E-value=42 Score=34.99 Aligned_cols=26 Identities=15% Similarity=0.048 Sum_probs=21.8
Q ss_pred CCCCCCchHHHHHHHHHhhhhhhhhH
Q 044089 158 PPARKCSLAQSCLNGINVLCGVGLLA 183 (521)
Q Consensus 158 ~~~~~~s~~~~v~~li~~iiG~GILs 183 (521)
+.+++-|.++-+..+..+-+|+|++.
T Consensus 91 d~kPefS~~sW~aMlF~AGmGiGl~F 116 (539)
T 4ain_A 91 DEAPEFRTVSWISMMFAAGMGIGLMF 116 (539)
T ss_dssp TCCCSSCHHHHHHHHHTTSCCTHHHH
T ss_pred CCCCCCcchHHHHHHHHHhhcchhee
Confidence 34667888899999999999999874
No 9
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=53.78 E-value=2.1e+02 Score=29.62 Aligned_cols=26 Identities=12% Similarity=-0.091 Sum_probs=21.8
Q ss_pred CCCCCchHHHHHHHHHhhhhhhhhHh
Q 044089 159 PARKCSLAQSCLNGINVLCGVGLLAT 184 (521)
Q Consensus 159 ~~~~~s~~~~v~~li~~iiG~GILsl 184 (521)
.+++-|.++-+..+..+-+|+|++.-
T Consensus 87 ~kPefs~~sW~aMlF~aGmGiGl~fw 112 (509)
T 2wsw_A 87 EKPEFSTASWIFMMFASCTSAAVLFW 112 (509)
T ss_dssp SCCSSCHHHHHHHHHHHTCCHHHHHH
T ss_pred CCCCCccchHHHHHHHHhhhhHHhhh
Confidence 46678888999999999999998764
No 10
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=25.05 E-value=4.8e+02 Score=25.47 Aligned_cols=44 Identities=16% Similarity=0.116 Sum_probs=30.1
Q ss_pred ChHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhh
Q 044089 225 TYPDVGQAAFGITGRLIVAIVLYLELFAASIEYLIMMSDNLASL 268 (521)
Q Consensus 225 sY~~i~~~~fG~~~~~l~~~~~~~~~~g~~v~y~i~~~~~l~~l 268 (521)
...+..+..+|+++..++.+...+..+++....+...+..+..+
T Consensus 259 ~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~ 302 (444)
T 3gia_A 259 ALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSL 302 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHH
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777888888878777777777777766665555555443
No 11
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=24.66 E-value=5e+02 Score=25.35 Aligned_cols=47 Identities=13% Similarity=0.160 Sum_probs=38.2
Q ss_pred CCChHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhc
Q 044089 223 LTTYPDVGQAAFGITGRLIVAIVLYLELFAASIEYLIMMSDNLASLF 269 (521)
Q Consensus 223 ~~sY~~i~~~~fG~~~~~l~~~~~~~~~~g~~v~y~i~~~~~l~~l~ 269 (521)
.....++.+..+|+++..++.+...+..+++...++...+..+..+-
T Consensus 259 ~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a 305 (445)
T 3l1l_A 259 ASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAA 305 (445)
T ss_dssp TCTHHHHHHHHHCTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678899999999999998888888888888888887777666543
No 12
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=24.42 E-value=5e+02 Score=25.35 Aligned_cols=26 Identities=8% Similarity=0.024 Sum_probs=14.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHh
Q 044089 377 KFPFVLMISFVFCSLLNAGVGICGYL 402 (521)
Q Consensus 377 k~~~~~~~a~~i~~~~Y~~vg~~gy~ 402 (521)
+....++..+.++=+++.++.+...+
T Consensus 54 ~~~~~~l~~La~aDll~~~~~~p~~~ 79 (488)
T 3eml_A 54 NVTNYFVVSLAAADIAVGVLAIPFAI 79 (488)
T ss_dssp SSHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666666666555444333
Done!