BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044090
(279 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VAM|A Chain A, Ftsz B. Subtilis
pdb|2VXY|A Chain A, The Structure Of Ftsz From Bacillus Subtilis At 1.7a
Resolution
Length = 382
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Query: 132 RMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNAANESK 191
RMIE+ + GVE+ VNTDAQA+ +S E ++QIG +LTRGLGAG NP VG AA ESK
Sbjct: 29 RMIENEVQGVEYIAVNTDAQALNLSKA--EVKMQIGAKLTRGLGAGANPEVGKKAAEESK 86
Query: 192 VAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGRRRAIQ 251
IEEA+ GADM+F K +G LTVG+ T PF FEGR+R +Q
Sbjct: 87 EQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVGVVTRPFTFEGRKRQLQ 146
Query: 252 AQEGVANLRNNVDTLIVIPNDKLLTAV 278
A G++ ++ VDTLIVIPND++L V
Sbjct: 147 AAGGISAMKEAVDTLIVIPNDRILEIV 173
>pdb|4E6E|A Chain A, Crystal Structure Of A Putative Cell Division Protein Ftsz
(Tfu_1113) From Thermobifida Fusca Yx-Er1 At 2.22 A
Resolution
Length = 314
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Query: 128 NAVNRMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNAA 187
NAVNR IE + GVEF +NTDAQA+ S + +L +G ELTRGLGAG NP VG AA
Sbjct: 23 NAVNRXIEEGLKGVEFIAINTDAQALLXSD--ADVKLDVGRELTRGLGAGANPDVGRKAA 80
Query: 188 NESKVAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGRR 247
+ + IEE + GAD +F +S+G LT+G+ T PF FEG+R
Sbjct: 81 EDHREEIEEVLKGADXVFVTAGEGGGTGTGGAPVVANIARSLGALTIGVVTRPFSFEGKR 140
Query: 248 RAIQAQEGVANLRNNVDTLIVIPNDKLLT 276
RA QA+ G+A LR VDTLIVIPND+LL+
Sbjct: 141 RATQAEAGIAXLREEVDTLIVIPNDRLLS 169
>pdb|2RHH|A Chain A, Synthetic Gene Encoded Bacillus Subtilis Ftsz With Bound
Sulfate Ion
pdb|2RHJ|A Chain A, Synthetic Gene Encoded Bacillus Subtilis Ftsz With Two
Sulfate Ions And Sodium Ion In The Nucleotide Pocket
pdb|2RHL|A Chain A, Synthetic Gene Encoded Bacillus Subtilis Ftsz Ncs Dimer
With Bound Gdp
pdb|2RHL|B Chain B, Synthetic Gene Encoded Bacillus Subtilis Ftsz Ncs Dimer
With Bound Gdp
pdb|2RHO|A Chain A, Synthetic Gene Encoded Bacillus Subtilis Ftsz Ncs Dimer
With Bound Gdp And Gtp-Gamma-S
pdb|2RHO|B Chain B, Synthetic Gene Encoded Bacillus Subtilis Ftsz Ncs Dimer
With Bound Gdp And Gtp-Gamma-S
Length = 325
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Query: 132 RMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNAANESK 191
RMIE+ + GVE+ VNTDAQA+ +S E ++QIG +LTRGLGAG NP VG AA ESK
Sbjct: 19 RMIENEVQGVEYIAVNTDAQALNLSK--AEVKMQIGAKLTRGLGAGANPEVGKKAAEESK 76
Query: 192 VAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGRRRAIQ 251
IEEA+ GADM+F K +G LTVG+ T PF FEGR+R +Q
Sbjct: 77 EQIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVGVVTRPFTFEGRKRQLQ 136
Query: 252 AQEGVANLRNNVDTLIVIPNDKLLTAV 278
A G++ ++ VDTLIVIPND++L V
Sbjct: 137 AAGGISAMKEAVDTLIVIPNDRILEIV 163
>pdb|3VO8|A Chain A, Staphylococcus Aureus Ftsz Gdp-Form
pdb|3VO8|B Chain B, Staphylococcus Aureus Ftsz Gdp-Form
Length = 392
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 90/147 (61%), Gaps = 2/147 (1%)
Query: 132 RMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNAANESK 191
RMI+ M VEF +NTD QA+ +S E+++QIG +LTRGLGAG NP +G AA ES+
Sbjct: 31 RMIDHGMNNVEFIAINTDGQALNLSKA--ESKIQIGEKLTRGLGAGANPEIGKKAAEESR 88
Query: 192 VAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGRRRAIQ 251
IE+AI GADM+F K MG LTVG+ T PF FEGR+R Q
Sbjct: 89 EQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQ 148
Query: 252 AQEGVANLRNNVDTLIVIPNDKLLTAV 278
A GV ++ VDTLIVIPND+LL V
Sbjct: 149 AAAGVEAMKAAVDTLIVIPNDRLLDIV 175
>pdb|4DXD|A Chain A, Staphylococcal Aureus Ftsz In Complex With 723
Length = 396
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 90/147 (61%), Gaps = 2/147 (1%)
Query: 132 RMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNAANESK 191
RMI+ M VEF +NTD QA+ +S E+++QIG +LTRGLGAG NP +G AA ES+
Sbjct: 35 RMIDHGMNNVEFIAINTDGQALNLSKA--ESKIQIGEKLTRGLGAGANPEIGKKAAEESR 92
Query: 192 VAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGRRRAIQ 251
IE+AI GADM+F K MG LTVG+ T PF FEGR+R Q
Sbjct: 93 EQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQ 152
Query: 252 AQEGVANLRNNVDTLIVIPNDKLLTAV 278
A GV ++ VDTLIVIPND+LL V
Sbjct: 153 AAAGVEAMKAAVDTLIVIPNDRLLDIV 179
>pdb|3VOA|A Chain A, Staphylococcus Aureus Ftsz 12-316 Gdp-Form
pdb|3VOB|A Chain A, Staphylococcus Aureus Ftsz With Pc190723
pdb|3VPA|A Chain A, Staphylococcus Aureus Ftsz Apo-Form
pdb|3VPA|B Chain B, Staphylococcus Aureus Ftsz Apo-Form
pdb|3VPA|C Chain C, Staphylococcus Aureus Ftsz Apo-Form
pdb|3VPA|D Chain D, Staphylococcus Aureus Ftsz Apo-Form
Length = 308
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 90/147 (61%), Gaps = 2/147 (1%)
Query: 132 RMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNAANESK 191
RMI+ M VEF +NTD QA+ +S E+++QIG +LTRGLGAG NP +G AA ES+
Sbjct: 21 RMIDHGMNNVEFIAINTDGQALNLSK--AESKIQIGEKLTRGLGAGANPEIGKKAAEESR 78
Query: 192 VAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGRRRAIQ 251
IE+AI GADM+F K MG LTVG+ T PF FEGR+R Q
Sbjct: 79 EQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQ 138
Query: 252 AQEGVANLRNNVDTLIVIPNDKLLTAV 278
A GV ++ VDTLIVIPND+LL V
Sbjct: 139 AAAGVEAMKAAVDTLIVIPNDRLLDIV 165
>pdb|1RLU|A Chain A, Mycobacterium Tuberculosis Ftsz In Complex With
Gtp-Gamma-S
pdb|1RLU|B Chain B, Mycobacterium Tuberculosis Ftsz In Complex With
Gtp-Gamma-S
pdb|1RQ2|A Chain A, Mycobacterium Tuberculosis Ftsz In Complex With Citrate
pdb|1RQ2|B Chain B, Mycobacterium Tuberculosis Ftsz In Complex With Citrate
pdb|1RQ7|A Chain A, Mycobacterium Tuberculosis Ftsz In Complex With Gdp
pdb|1RQ7|B Chain B, Mycobacterium Tuberculosis Ftsz In Complex With Gdp
Length = 382
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Query: 128 NAVNRMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNAA 187
NAVNRMIE + GVEF +NTDAQA+ +S + +L +G + TRGLGAG +P VG AA
Sbjct: 25 NAVNRMIEQGLKGVEFIAINTDAQALLMSDA--DVKLDVGRDSTRGLGAGADPEVGRKAA 82
Query: 188 NESKVAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGRR 247
++K IEE + GADM+F + +G LTVG+ T PF FEG+R
Sbjct: 83 EDAKDEIEELLRGADMVFVTAGEGGGTGTGGAPVVASIARKLGALTVGVVTRPFSFEGKR 142
Query: 248 RAIQAQEGVANLRNNVDTLIVIPNDKLL 275
R+ QA+ G+A LR + DTLIVIPND+LL
Sbjct: 143 RSNQAENGIAALRESCDTLIVIPNDRLL 170
>pdb|2Q1X|A Chain A, Crystal Structure Of Cell Division Protein Ftsz From
Mycobacterium Tuberculosis In Complex With Citrate.
pdb|2Q1X|B Chain B, Crystal Structure Of Cell Division Protein Ftsz From
Mycobacterium Tuberculosis In Complex With Citrate.
pdb|2Q1Y|A Chain A, Crystal Structure Of Cell Division Protein Ftsz From
Mycobacterium Tuberculosis In Complex With Gtp-Gamma-S
pdb|2Q1Y|B Chain B, Crystal Structure Of Cell Division Protein Ftsz From
Mycobacterium Tuberculosis In Complex With Gtp-Gamma-S
Length = 379
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Query: 128 NAVNRMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNAA 187
NAVNRMIE + GVEF +NTDAQA+ +S + +L +G + TRGLGAG +P VG AA
Sbjct: 22 NAVNRMIEQGLKGVEFIAINTDAQALLMSDA--DVKLDVGRDSTRGLGAGADPEVGRKAA 79
Query: 188 NESKVAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGRR 247
++K IEE + GADM+F + +G LTVG+ T PF FEG+R
Sbjct: 80 EDAKDEIEELLRGADMVFVTAGEGGGTGTGGAPVVASIARKLGALTVGVVTRPFSFEGKR 139
Query: 248 RAIQAQEGVANLRNNVDTLIVIPNDKLL 275
R+ QA+ G+A LR + DTLIVIPND+LL
Sbjct: 140 RSNQAENGIAALRESCDTLIVIPNDRLL 167
>pdb|3VO9|A Chain A, Staphylococcus Aureus Ftsz Apo-Form (Semet)
pdb|3VO9|B Chain B, Staphylococcus Aureus Ftsz Apo-Form (Semet)
pdb|3VO9|C Chain C, Staphylococcus Aureus Ftsz Apo-Form (Semet)
pdb|3VO9|D Chain D, Staphylococcus Aureus Ftsz Apo-Form (Semet)
Length = 308
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
Query: 132 RMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNAANESK 191
R I+ VEF +NTD QA+ +S E+++QIG +LTRGLGAG NP +G AA ES+
Sbjct: 21 RXIDHGXNNVEFIAINTDGQALNLSK--AESKIQIGEKLTRGLGAGANPEIGKKAAEESR 78
Query: 192 VAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGRRRAIQ 251
IE+AI GAD +F K G LTVG+ T PF FEGR+R Q
Sbjct: 79 EQIEDAIQGADXVFVTSGXGGGTGTGAAPVVAKIAKEXGALTVGVVTRPFSFEGRKRQTQ 138
Query: 252 AQEGVANLRNNVDTLIVIPNDKLLTAV 278
A GV + VDTLIVIPND+LL V
Sbjct: 139 AAAGVEAXKAAVDTLIVIPNDRLLDIV 165
>pdb|2VAW|A Chain A, Ftsz Pseudomonas Aeruginosa Gdp
Length = 394
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 87/149 (58%), Gaps = 2/149 (1%)
Query: 128 NAVNRMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNAA 187
NAVN M ++++ GVEF NTDAQA+K + LQ+G +T+GLGAG NP VG AA
Sbjct: 25 NAVNHMAKNNVEGVEFICANTDAQALK--NIAARTVLQLGPGVTKGLGAGANPEVGRQAA 82
Query: 188 NESKVAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGRR 247
E + I E + GADM+F K MGILTV + T PF FEGR+
Sbjct: 83 LEDRERISEVLEGADMVFITTGMGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPFEGRK 142
Query: 248 RAIQAQEGVANLRNNVDTLIVIPNDKLLT 276
R A EG+ L +VD+LI IPN+KLLT
Sbjct: 143 RMQIADEGIRALAESVDSLITIPNEKLLT 171
>pdb|1OFU|A Chain A, Crystal Structure Of Sula:ftsz From Pseudomonas Aeruginosa
pdb|1OFU|B Chain B, Crystal Structure Of Sula:ftsz From Pseudomonas Aeruginosa
Length = 320
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 87/149 (58%), Gaps = 2/149 (1%)
Query: 128 NAVNRMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNAA 187
NAVN M ++++ GVEF NTDAQA+K + LQ+G +T+GLGAG NP VG AA
Sbjct: 25 NAVNHMAKNNVEGVEFICANTDAQALK--NIAARTVLQLGPGVTKGLGAGANPEVGRQAA 82
Query: 188 NESKVAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGRR 247
E + I E + GADM+F K MGILTV + T PF FEGR+
Sbjct: 83 LEDRERISEVLEGADMVFITTGMGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPFEGRK 142
Query: 248 RAIQAQEGVANLRNNVDTLIVIPNDKLLT 276
R A EG+ L +VD+LI IPN+KLLT
Sbjct: 143 RMQIADEGIRALAESVDSLITIPNEKLLT 171
>pdb|1W5F|A Chain A, Ftsz, T7 Mutated, Domain Swapped (T. Maritima)
pdb|1W5F|B Chain B, Ftsz, T7 Mutated, Domain Swapped (T. Maritima)
Length = 353
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 85/149 (57%), Gaps = 2/149 (1%)
Query: 127 SNAVNRMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNA 186
+NA+NRMIE + GVEF VNTD Q ++ S + ++QIG +TRGLGAGG P +G A
Sbjct: 34 NNAINRMIEIGIHGVEFVAVNTDLQVLEASNA--DVKIQIGENITRGLGAGGRPEIGEQA 91
Query: 187 ANESKVAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGR 246
A ES+ I E + M+F K MGILTV I T PF FEG
Sbjct: 92 ALESEEKIREVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGILTVAIVTTPFYFEGP 151
Query: 247 RRAIQAQEGVANLRNNVDTLIVIPNDKLL 275
R +A EG+ LR +VDTLI I N+KL+
Sbjct: 152 ERLKKAIEGLKKLRKHVDTLIKISNNKLM 180
>pdb|2R6R|1 Chain 1, Aquifex Aeolicus Ftsz
pdb|2R75|1 Chain 1, Aquifex Aeolicus Ftsz With 8-Morpholino-Gtp
Length = 338
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Query: 127 SNAVNRMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNA 186
SNAVNRM E + GVE + +NTD Q + V N++QIG ++TRGLGAG P VG A
Sbjct: 20 SNAVNRMYEDGIEGVELYAINTDVQHLSTLKV--PNKIQIGEKVTRGLGAGAKPEVGEEA 77
Query: 187 ANESKVAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGR 246
A E I+E + DM+F K MGILTV +AT+PF FEG
Sbjct: 78 ALEDIDKIKEILRDTDMVFISAGLGGGTGTGAAPVIAKTAKEMGILTVAVATLPFRFEGP 137
Query: 247 RRAIQAQEGVANLRNNVDTLIVIPNDKL 274
R+ +A +G+ L+ + D IVI NDK+
Sbjct: 138 RKMEKALKGLEKLKESSDAYIVIHNDKI 165
>pdb|1W5E|A Chain A, Ftsz W319y Mutant, P1 (m. Jannaschii)
pdb|1W5E|B Chain B, Ftsz W319y Mutant, P1 (m. Jannaschii)
pdb|1W5E|C Chain C, Ftsz W319y Mutant, P1 (m. Jannaschii)
pdb|1W5E|D Chain D, Ftsz W319y Mutant, P1 (m. Jannaschii)
pdb|1W5E|E Chain E, Ftsz W319y Mutant, P1 (m. Jannaschii)
pdb|1W5E|F Chain F, Ftsz W319y Mutant, P1 (m. Jannaschii)
pdb|1W5E|G Chain G, Ftsz W319y Mutant, P1 (m. Jannaschii)
pdb|1W5E|H Chain H, Ftsz W319y Mutant, P1 (m. Jannaschii)
pdb|1W5E|I Chain I, Ftsz W319y Mutant, P1 (m. Jannaschii)
Length = 364
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
Query: 127 SNAVNRMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNA 186
+N + R+ + G + +NTDAQ + + + ++ IG +LTRGLGAGGNP +G A
Sbjct: 50 NNTITRLKMEGIEGAKTVAINTDAQQLIRTK--ADKKILIGKKLTRGLGAGGNPKIGEEA 107
Query: 187 ANESKVAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGR 246
A ES I+ AI +DM+F K +G LTV + T+PF EG+
Sbjct: 108 AKESAEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVTLPFVMEGK 167
Query: 247 RRAIQAQEGVANLRNNVDTLIVIPNDKLLTAV 278
R A EG+ L+ + DTL+VIPN+KL V
Sbjct: 168 VRMKNAMEGLERLKQHTDTLVVIPNEKLFEIV 199
>pdb|1FSZ|A Chain A, Crystal Structure Of The Cell-Division Protein Ftsz At
2.8a Resolution
Length = 372
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
Query: 127 SNAVNRMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNA 186
+N + R+ + G + +NTDAQ + + + ++ IG +LTRGLGAGGNP +G A
Sbjct: 50 NNTITRLKMEGIEGAKTVAINTDAQQLIRTK--ADKKILIGKKLTRGLGAGGNPKIGEEA 107
Query: 187 ANESKVAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGR 246
A ES I+ AI +DM+F K +G LTV + T+PF EG+
Sbjct: 108 AKESAEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVTLPFVMEGK 167
Query: 247 RRAIQAQEGVANLRNNVDTLIVIPNDKLLTAV 278
R A EG+ L+ + DTL+VIPN+KL V
Sbjct: 168 VRMKNAMEGLERLKQHTDTLVVIPNEKLFEIV 199
>pdb|1W58|1 Chain 1, Ftsz Gmpcpp Soak I213 (M. Jannaschii)
pdb|1W59|A Chain A, Ftsz Dimer, Empty (M. Jannaschii)
pdb|1W59|B Chain B, Ftsz Dimer, Empty (M. Jannaschii)
pdb|1W5A|A Chain A, Ftsz Dimer, Mggtp Soak (M. Jannaschii)
pdb|1W5A|B Chain B, Ftsz Dimer, Mggtp Soak (M. Jannaschii)
pdb|1W5B|A Chain A, Ftsz Dimer, Gtp Soak (M. Jannaschii)
pdb|1W5B|B Chain B, Ftsz Dimer, Gtp Soak (M. Jannaschii)
pdb|2VAP|A Chain A, Ftsz Gdp M. Jannaschii
Length = 364
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
Query: 127 SNAVNRMIESSMTGVEFWIVNTDAQAMKVSPVIPENRLQIGCELTRGLGAGGNPSVGMNA 186
+N + R+ + G + +NTDAQ + + + ++ IG +LTRGLGAGGNP +G A
Sbjct: 50 NNTITRLKMEGIEGAKTVAINTDAQQLIRTK--ADKKILIGKKLTRGLGAGGNPKIGEEA 107
Query: 187 ANESKVAIEEAISGADMIFXXXXXXXXXXXXXXXXXXXXXKSMGILTVGIATVPFCFEGR 246
A ES I+ AI +DM+F K +G LTV + T+PF EG+
Sbjct: 108 AKESAEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVTLPFVMEGK 167
Query: 247 RRAIQAQEGVANLRNNVDTLIVIPNDKLLTAV 278
R A EG+ L+ + DTL+VIPN+KL V
Sbjct: 168 VRMKNAMEGLERLKQHTDTLVVIPNEKLFEIV 199
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,802,917
Number of Sequences: 62578
Number of extensions: 234588
Number of successful extensions: 618
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 570
Number of HSP's gapped (non-prelim): 16
length of query: 279
length of database: 14,973,337
effective HSP length: 98
effective length of query: 181
effective length of database: 8,840,693
effective search space: 1600165433
effective search space used: 1600165433
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)